316 200 0 0 chr17 1 56 -89504497 - Alu SINE Alu -247 55 1 2325 82 10 0 chr17 66 371 -89504182 - AluSx SINE Alu -4 308 1 2014 121 3 16 chr17 684 851 -89503702 - AluJb SINE Alu -11 301 138 2138 105 3 7 chr17 851 1156 -89503397 - AluY SINE Alu -7 304 1 2014 121 3 16 chr17 1156 1293 -89503260 - AluJb SINE Alu -174 138 1 1874 101 0 8 chr17 1441 1698 -89502855 - AluSx SINE Alu -57 255 1 223 278 0 0 chr17 1990 2044 -89502509 - L2 LINE L2 -2 3270 3217 2232 106 3 0 chr17 2215 2516 -89502037 + AluSx SINE Alu 1 302 -10 210 333 42 0 chr17 3102 3198 -89501355 + MIR3 SINE MIR 109 208 0 485 294 63 50 chr17 3461 3517 -89501036 - MIR SINE MIR 0 262 208 2202 91 0 10 chr17 3517 3825 -89500728 - AluY SINE Alu -6 305 1 485 294 63 50 chr17 3825 3989 -89500564 - MIR SINE MIR -54 208 39 1523 97 0 18 chr17 4525 4752 -89499801 - AluSg SINE Alu -87 223 1 1310 130 0 5 chr17 5897 6097 -89498456 + AluSq SINE Alu 30 228 -85 2368 67 13 13 chr17 6232 6367 -89498186 + AluSx SINE Alu 1 135 -177 2051 120 3 7 chr17 6367 6675 -89497878 + AluSp SINE Alu 1 307 -6 2368 67 13 13 chr17 6675 6851 -89497702 + AluSx SINE Alu 134 312 0 2390 54 0 0 chr17 7098 7396 -89497157 + AluY SINE Alu 1 298 -13 1633 129 4 0 chr17 8073 8313 -89496240 + AluSx SINE Alu 54 294 -18 208 293 0 0 chr17 8450 8508 -89496045 - L2 LINE L2 -638 2676 2619 837 141 7 28 chr17 8516 8658 -89495895 + AluJo SINE Alu 1 139 -173 1607 148 0 76 chr17 8660 8801 -89495752 + AluJo SINE Alu 5 110 -202 2460 42 0 0 chr17 8801 9090 -89495463 + AluY SINE Alu 5 293 -18 1607 148 0 76 chr17 9090 9265 -89495288 + AluJo SINE Alu 110 297 -15 293 174 153 41 chr17 9391 9408 -89495145 + MER5A DNA MER1_type 1 15 -174 1963 118 20 14 chr17 9408 9705 -89494848 + AluSx SINE Alu 3 301 -11 293 174 153 41 chr17 9705 9785 -89494768 + MER5A DNA MER1_type 15 109 -80 980 98 0 0 chr17 10375 10507 -89494046 - AluSq/x SINE Alu -181 132 1 228 160 9 66 chr17 11833 11939 -89492614 + GA-rich Low_complexity Low_complexity 2 101 0 264 287 46 11 chr17 12095 12182 -89492371 + L1MC/D LINE L1 5576 5665 -2143 479 204 0 11 chr17 12185 12278 -89492275 - MER8 DNA MER2_type 0 239 148 2172 100 0 7 chr17 12279 12578 -89491975 + AluSx SINE Alu 1 297 -15 997 67 0 30 chr17 12751 12886 -89491667 + AluY SINE Alu 1 131 -180 2117 84 40 7 chr17 12888 13185 -89491368 + AluY SINE Alu 1 307 -4 285 248 28 9 chr17 13190 13299 -89491254 + L1M4 LINE L1 4499 4609 -1537 2038 112 7 0 chr17 14090 14386 -89490167 - AluSx SINE Alu -14 298 1 1057 81 7 0 chr17 14728 14864 -89489689 - AluSq/x SINE Alu -175 137 1 2384 67 0 16 chr17 14976 15292 -89489261 - AluY SINE Alu 0 311 1 275 158 0 4 chr17 15292 15351 -89489202 - Alu SINE Alu -255 44 1 21 0 0 0 chr17 15620 15641 -89488912 + AT_rich Low_complexity Low_complexity 1 21 0 1230 64 0 0 chr17 16508 16665 -89487888 + AluSq SINE Alu 1 157 -156 632 256 12 12 chr17 17013 17173 -89487380 - MER5A DNA MER1_type -29 160 1 2127 111 0 0 chr17 17297 17594 -89486959 - AluSx SINE Alu -15 297 1 2487 53 3 0 chr17 17599 17901 -89486652 - AluY SINE Alu -8 303 1 23 0 0 0 chr17 17901 17924 -89486629 + AT_rich Low_complexity Low_complexity 1 23 0 804 147 0 0 chr17 17979 18108 -89486445 - AluSc SINE Alu -5 304 176 867 68 17 0 chr17 18209 18327 -89486226 + AluY SINE Alu 181 300 -11 243 88 0 0 chr17 18707 18741 -89485812 + (GGGAGA)n Simple_repeat Simple_repeat 3 36 0 712 75 0 0 chr17 18817 18911 -89485642 - AluY SINE Alu -14 297 204 1792 89 0 0 chr17 18911 19146 -89485407 - AluSc SINE Alu -74 235 1 388 244 16 11 chr17 19433 19559 -89484994 + MIR SINE MIR 104 229 -33 375 192 83 154 chr17 20061 20130 -89484423 - MER2 DNA MER2_type 0 345 273 2129 112 0 0 chr17 20130 20434 -89484119 + AluSx SINE Alu 1 304 -8 1890 118 13 41 chr17 20435 20749 -89483804 + AluSx SINE Alu 1 305 -7 375 192 83 154 chr17 20749 20917 -89483636 - MER2 DNA MER2_type -71 274 123 438 148 28 46 chr17 20918 21026 -89483527 + L1MA4 LINE L1 6195 6300 0 445 235 52 52 chr17 21063 21199 -89483354 - MER2 DNA MER2_type -209 136 1 201 231 62 0 chr17 21248 21313 -89483240 - MER5B DNA MER1_type -106 72 4 1906 144 3 7 chr17 21860 22159 -89482394 - AluSx SINE Alu -14 298 1 311 256 31 62 chr17 22161 22290 -89482263 - HAL1 LINE L1 -583 1924 1800 780 263 85 18 chr17 22997 23278 -89481275 - MER102b DNA MER1_type 0 341 42 493 343 52 45 chr17 23403 23450 -89481103 - L3 LINE CR1 -860 717 672 2196 111 0 0 chr17 23450 23757 -89480796 - AluSx SINE Alu -5 307 1 493 343 52 45 chr17 23757 23995 -89480558 - L3 LINE CR1 -905 672 430 1485 165 104 4 chr17 24705 24984 -89479569 - AluJo SINE Alu -5 307 1 212 261 0 0 chr17 24988 25034 -89479519 + T-rich Low_complexity Low_complexity 5 50 0 1911 128 0 42 chr17 25446 25758 -89478795 + AluSx SINE Alu 1 299 -13 182 36 0 36 chr17 25950 25978 -89478575 + (CGGGGG)n Simple_repeat Simple_repeat 2 28 0 2123 54 0 0 chr17 27433 27691 -89476862 + AluSx SINE Alu 39 296 -16 1389 137 82 4 chr17 27947 28180 -89476373 + AluJo SINE Alu 14 264 -48 2116 111 0 10 chr17 28358 28656 -89475897 + AluSx SINE Alu 1 295 -17 2000 151 0 0 chr17 30030 30341 -89474212 - AluSx SINE Alu -1 311 1 447 71 0 0 chr17 30341 30397 -89474156 - AluSq/x SINE Alu -177 135 80 1420 142 0 0 chr17 30399 30611 -89473942 - AluSq SINE Alu -101 212 1 268 348 68 59 chr17 30737 30973 -89473580 - L2 LINE L2 -8 3264 3027 1954 112 18 3 chr17 31089 31375 -89473178 - AluSg SINE Alu -20 290 1 1712 165 34 3 chr17 31433 31724 -89472829 - AluJb SINE Alu -10 302 3 559 149 0 26 chr17 32799 32967 -89471586 + AluSq SINE Alu 1 206 -107 2099 110 3 0 chr17 33174 33466 -89471087 - AluSx SINE Alu -19 293 1 2030 119 10 0 chr17 33469 33762 -89470791 - AluSq SINE Alu -17 296 1 267 31 0 0 chr17 34304 34336 -89470217 + (TG)n Simple_repeat Simple_repeat 2 33 0 1500 182 7 20 chr17 34336 34493 -89470060 - AluJo SINE Alu -20 292 139 1975 89 32 0 chr17 34493 34774 -89469779 - AluSg SINE Alu -8 302 13 1500 182 7 20 chr17 34774 34912 -89469641 - AluJo SINE Alu -173 139 1 1408 93 15 0 chr17 35631 35835 -89468718 - AluSg/x SINE Alu -16 296 90 2358 77 0 3 chr17 35938 36238 -89468315 - AluSp SINE Alu -14 299 1 545 242 47 32 chr17 36240 36430 -89468123 - Charlie2 DNA MER1_type -556 2306 2114 455 137 41 0 chr17 36444 36517 -89468036 + FLAM_A SINE Alu 56 131 -11 952 275 30 0 chr17 36518 36780 -89467773 - Charlie2 DNA MER1_type -737 2125 1856 2308 80 3 0 chr17 36794 37096 -89467457 - AluSx SINE Alu -9 303 1 536 268 22 0 chr17 37218 37356 -89467197 - Charlie2 DNA MER1_type -2713 149 9 2293 95 7 0 chr17 37943 38247 -89466306 - AluSq SINE Alu -7 306 1 1033 89 0 0 chr17 38247 38382 -89466171 - AluSq/x SINE Alu -178 135 1 572 233 25 17 chr17 38386 38506 -89466047 - FLAM_A SINE Alu -15 127 7 2380 42 0 0 chr17 38513 38821 -89465732 - AluY SINE Alu 0 308 1 316 200 0 0 chr17 38832 38892 -89465661 - L1MA6 LINE L1 -5 6295 6236 240 307 162 0 chr17 39081 39224 -89465329 + MIR3 SINE MIR 10 179 -75 383 308 94 23 chr17 39237 39469 -89465084 - MIR SINE MIR -6 256 14 2326 70 3 0 chr17 40561 40862 -89463691 - AluSx SINE Alu -10 302 1 2036 60 53 21 chr17 42003 42286 -89462267 + AluSc SINE Alu 1 292 -17 766 79 4 2 chr17 42356 42597 -89461956 + AluSx SINE Alu 1 290 -19 291 106 0 0 chr17 42717 42764 -89461789 + Alu SINE Alu 254 300 -2 1786 167 7 7 chr17 42825 43130 -89461423 + AluJb SINE Alu 1 305 -7 2270 74 0 0 chr17 43621 43905 -89460648 + AluSq SINE Alu 1 284 -29 201 300 0 67 chr17 43982 44072 -89460481 + L3 LINE CR1 1409 1492 -85 782 240 39 0 chr17 44538 44571 -89459982 + L1MB3 LINE L1 5970 6000 -183 207 0 0 0 chr17 44571 44594 -89459959 + (CGGAA)n Simple_repeat Simple_repeat 2 24 0 782 240 39 0 chr17 44594 44764 -89459789 + L1MB3 LINE L1 6000 6181 -2 2168 93 3 3 chr17 44773 45073 -89459480 + AluSq SINE Alu 1 300 -13 753 167 173 0 chr17 45089 45239 -89459314 + AluJo SINE Alu 122 297 -15 411 270 218 40 chr17 45240 45492 -89459061 - L1ME4a LINE L1 -34 6087 5791 23 0 0 0 chr17 45754 45777 -89458776 + AT_rich Low_complexity Low_complexity 1 23 0 1993 124 10 17 chr17 45777 46076 -89458477 - AluSx SINE Alu -15 297 1 263 373 40 0 chr17 46205 46355 -89458198 - L2 LINE L2 -868 2446 2291 474 291 40 7 chr17 47064 47212 -89457341 - MIR SINE MIR -29 233 81 2149 110 3 0 chr17 47213 47513 -89457040 + AluSx SINE Alu 1 301 -11 895 175 0 0 chr17 48035 48189 -89456364 + AluJo SINE Alu 1 154 -158 2119 102 10 0 chr17 48855 49149 -89455404 - AluSc SINE Alu -12 297 1 1160 99 0 12 chr17 49155 49317 -89455236 - FRAM SINE Alu -17 159 1 1935 104 24 0 chr17 49433 49721 -89454832 - AluSx SINE Alu -17 295 1 1793 92 53 32 chr17 50794 51075 -89453478 + AluSg SINE Alu 9 295 -15 608 300 130 0 chr17 51563 51793 -89452760 - MIR SINE MIR -1 261 2 252 0 0 0 chr17 51892 51920 -89452633 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1789 152 11 0 chr17 51922 52198 -89452355 - AluJb SINE Alu -33 279 1 2345 80 3 0 chr17 53838 54139 -89450414 - AluSp SINE Alu -10 303 2 2188 101 30 0 chr17 55555 55853 -89448700 + AluSx SINE Alu 1 307 -5 2174 119 3 0 chr17 56296 56599 -89447954 + AluSx SINE Alu 1 304 -8 1038 106 0 0 chr17 56829 56970 -89447583 + AluJb SINE Alu 1 141 -171 26 30 0 0 chr17 56987 57020 -89447533 + AT_rich Low_complexity Low_complexity 1 33 0 324 0 0 0 chr17 57654 57690 -89446863 + (CA)n Simple_repeat Simple_repeat 2 37 0 1743 190 3 0 chr17 57770 58075 -89446478 + AluSx SINE Alu 1 306 -6 2535 33 0 0 chr17 58245 58544 -89446009 + AluY SINE Alu 1 299 -12 461 423 127 14 chr17 59722 60228 -89444325 + L3 LINE CR1 185 747 -830 404 42 0 0 chr17 60228 60276 -89444277 + AluY SINE Alu 155 202 -109 1828 101 8 8 chr17 60288 60545 -89444008 + AluSq SINE Alu 5 261 -52 932 64 29 81 chr17 60645 60741 -89443812 - MER30 DNA MER1_type -60 170 85 2226 101 3 0 chr17 60741 61037 -89443516 - AluSp SINE Alu -16 297 1 932 64 29 81 chr17 61037 61113 -89443440 - MER30 DNA MER1_type -145 85 7 410 263 47 52 chr17 61114 61327 -89443226 + L3 LINE CR1 1018 1229 -348 232 274 88 26 chr17 61520 61633 -89442920 + MLT1K LTR MaLR 97 216 -372 441 257 117 9 chr17 61990 62104 -89442449 + L1MC5 LINE L1 7458 7558 -403 2201 73 0 4 chr17 62104 62379 -89442174 + AluY SINE Alu 23 296 -15 441 257 117 9 chr17 62379 62478 -89442075 + L1MC5 LINE L1 7558 7694 -267 271 272 39 10 chr17 62570 62673 -89441880 + L1MC5 LINE L1 7822 7927 -34 863 192 23 6 chr17 62802 62979 -89441574 + AluJb SINE Alu 121 300 -12 2099 135 3 0 chr17 63048 63359 -89441194 + AluSx SINE Alu 1 312 0 682 268 41 41 chr17 63543 63786 -89440767 - MIR SINE MIR -10 252 10 2177 106 3 0 chr17 65336 65638 -89438915 - AluSp SINE Alu -10 303 1 2317 74 0 0 chr17 65821 66118 -89438435 + AluY SINE Alu 1 297 -14 497 113 38 0 chr17 66279 66359 -89438194 + AluS SINE Alu 1 83 -230 202 244 0 0 chr17 67411 67456 -89437097 + T-rich Low_complexity Low_complexity 1 45 0 565 103 0 0 chr17 68082 68160 -89436393 + AluSq/x SINE Alu 58 135 -178 2096 76 0 28 chr17 68160 68449 -89436104 + AluSx SINE Alu 1 281 -31 397 278 43 43 chr17 70256 70418 -89434135 + MIR3 SINE MIR 5 166 -42 420 287 237 20 chr17 70666 71158 -89433395 - L2 LINE L2 -16 3297 2688 1326 102 0 0 chr17 71233 71420 -89433133 - AluSg/x SINE Alu 0 310 124 2413 49 7 10 chr17 71420 71728 -89432825 - AluY SINE Alu -4 307 1 1795 154 16 3 chr17 71755 72060 -89432493 - AluJb SINE Alu -3 309 1 202 289 141 58 chr17 72068 72189 -89432364 - MIR SINE MIR -122 140 10 2407 83 0 0 chr17 72515 72827 -89431726 - AluSx SINE Alu 0 312 1 832 92 0 0 chr17 74470 74589 -89429964 - AluSx SINE Alu 0 309 191 1042 93 7 0 chr17 74590 74730 -89429823 - AluSx SINE Alu -171 141 1 1644 119 67 28 chr17 74800 75085 -89429468 - AluSg SINE Alu -14 296 1 2163 85 0 0 chr17 75199 75471 -89429082 - AluSc SINE Alu -37 272 1 245 196 0 36 chr17 75587 75643 -89428910 + MLT2D LTR ERVL 1 54 -360 6079 196 18 12 chr17 75646 76947 -89427606 + ERVL LTR ERVL 3031 4338 -1426 5980 167 25 3 chr17 77331 78446 -89426107 + ERVL LTR ERVL 4298 5437 -327 248 217 17 0 chr17 78447 78507 -89426046 - Tigger1 DNA MER2_type -2 2416 2356 2064 131 3 7 chr17 78507 78813 -89425740 + AluSx SINE Alu 1 305 -7 2134 109 3 0 chr17 78814 79116 -89425437 + AluY SINE Alu 1 303 -8 1749 137 53 14 chr17 79116 79651 -89424902 - Tigger1 DNA MER2_type -210 2208 1582 2019 147 0 0 chr17 79652 79951 -89424602 - AluJb SINE Alu -13 299 1 369 0 0 0 chr17 80891 80932 -89423621 + (TG)n Simple_repeat Simple_repeat 2 42 0 2415 64 0 0 chr17 80942 81238 -89423315 - AluY SINE Alu -15 296 1 2064 112 10 10 chr17 81286 81598 -89422955 + AluSx SINE Alu 1 312 0 997 104 8 0 chr17 81633 81767 -89422786 + AluSg/x SINE Alu 144 278 -32 8160 51 24 4 chr17 81767 82754 -89421799 - LTR13 LTR ERVK 0 1007 1 315 0 0 0 chr17 82762 82797 -89421756 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2048 98 0 33 chr17 83544 83850 -89420703 - AluSg SINE Alu -14 296 1 202 280 0 0 chr17 84287 84337 -89420216 + GA-rich Low_complexity Low_complexity 3 52 0 408 208 26 32 chr17 84597 84751 -89419802 + (CGGGG)n Simple_repeat Simple_repeat 3 155 0 195 152 0 0 chr17 85058 85104 -89419449 + G-rich Low_complexity Low_complexity 6 51 0 377 253 86 21 chr17 85313 85486 -89419067 + Charlie2 DNA MER1_type 2423 2610 -252 2311 70 0 26 chr17 85486 85799 -89418754 - AluY SINE Alu -6 305 1 377 253 86 21 chr17 85799 85811 -89418742 + Charlie2 DNA MER1_type 2610 2620 -242 2540 40 0 0 chr17 85899 86196 -89418357 - AluY SINE Alu -14 297 1 848 239 24 0 chr17 86196 86409 -89418144 + Charlie2 DNA MER1_type 2604 2821 -41 244 290 160 10 chr17 86584 86684 -89417869 - MIR SINE MIR -54 208 94 300 281 49 0 chr17 86788 86870 -89417683 + MIR SINE MIR 98 183 -79 230 322 59 67 chr17 87827 88066 -89416487 + MER102a DNA MER1_type 85 321 -9 261 329 58 44 chr17 88636 88773 -89415780 - MIR SINE MIR -54 154 16 813 254 40 20 chr17 92477 92678 -89411875 + MIR SINE MIR 21 225 -37 23 0 0 0 chr17 97886 97909 -89406644 + AT_rich Low_complexity Low_complexity 1 23 0 1807 107 48 38 chr17 99840 100129 -89404424 + AluSg SINE Alu 1 292 -18 708 191 34 14 chr17 100129 100276 -89404277 + MER20 DNA MER1_type 69 218 -1 351 65 0 0 chr17 100674 100720 -89403833 + (TA)n Simple_repeat Simple_repeat 1 46 0 503 228 65 8 chr17 101648 101771 -89402782 - MIR SINE MIR -70 192 63 1800 61 5 0 chr17 102215 102429 -89402124 - AluY SINE Alu -13 298 84 1284 98 5 79 chr17 103493 103696 -89400857 + AluSg SINE Alu 1 188 -122 1609 84 10 0 chr17 103696 103898 -89400655 + AluSq SINE Alu 104 307 -6 1379 223 41 0 chr17 103899 104218 -89400335 + MER63 DNA MER1_type 680 1011 -49 2330 91 0 0 chr17 104243 104529 -89400024 - AluSx SINE Alu -26 286 1 1122 164 0 0 chr17 104903 105068 -89399485 + AluJb SINE Alu 137 301 -11 2098 101 39 3 chr17 105219 105505 -89399048 + AluSc SINE Alu 1 296 -13 213 272 47 6 chr17 105897 106066 -89398487 + (AGGTG)n Simple_repeat Simple_repeat 3 178 0 266 265 29 12 chr17 106104 106274 -89398279 + (AGGTG)n Simple_repeat Simple_repeat 1 173 0 2521 71 0 7 chr17 107373 107682 -89396871 - AluSq SINE Alu -6 307 1 238 116 47 0 chr17 107752 107795 -89396758 - L1MB3 LINE L1 -7 6176 6132 2313 102 0 10 chr17 107795 108098 -89396455 - AluSx SINE Alu -12 300 1 851 173 13 13 chr17 111244 111400 -89393153 + BC200 scRNA scRNA 1 156 -44 1602 132 100 48 chr17 111404 111693 -89392860 + AluJo SINE Alu 1 304 -8 2324 106 0 3 chr17 111992 112293 -89392260 + AluSq SINE Alu 1 300 -13 207 0 0 0 chr17 112594 112617 -89391936 + (A)n Simple_repeat Simple_repeat 1 23 0 2343 78 23 19 chr17 113022 113330 -89391223 - AluSg SINE Alu -1 309 1 2241 122 3 0 chr17 113591 113895 -89390658 - AluSg SINE Alu -5 305 1 2225 111 0 3 chr17 114510 114808 -89389745 + AluSx SINE Alu 1 297 -15 2133 102 9 25 chr17 115280 115595 -89388958 + AluSx SINE Alu 1 310 -2 932 244 59 59 chr17 115907 116146 -89388407 + MER33 DNA MER1_type 1 242 -2343 2129 154 0 0 chr17 116146 116451 -89388102 - AluJo SINE Alu -2 310 6 932 244 59 59 chr17 116451 116535 -89388018 + MER33 DNA MER1_type 241 324 0 1230 209 25 48 chr17 116705 117020 -89387533 - AluJo SINE Alu -4 308 1 2310 114 0 0 chr17 117306 117613 -89386940 + AluSx SINE Alu 1 307 -5 514 217 85 0 chr17 118337 118466 -89386087 + MIR SINE MIR 80 219 -43 2106 130 0 3 chr17 118467 118760 -89385793 + AluJb SINE Alu 1 292 -20 1252 114 0 16 chr17 118768 118952 -89385601 + AluSg/x SINE Alu 128 308 -4 2140 97 41 3 chr17 119080 119370 -89385183 + AluSp SINE Alu 1 301 -12 2290 125 0 0 chr17 120148 120459 -89384094 + AluSx SINE Alu 1 311 -1 240 318 93 6 chr17 120590 120749 -89383804 - MIR SINE MIR -60 148 20 198 246 0 62 chr17 120831 120896 -89383657 - MIR3 SINE MIR -40 168 108 2318 93 3 6 chr17 120927 121238 -89383315 + AluSq SINE Alu 1 310 -3 283 270 180 0 chr17 121701 121812 -89382741 + MIR SINE MIR 12 142 -120 1777 90 0 25 chr17 121988 122232 -89382321 + AluSg/x SINE Alu 70 307 -5 1183 172 31 26 chr17 123372 123544 -89381009 - AluJo SINE Alu -7 305 130 2527 67 3 3 chr17 123544 123844 -89380709 - AluSp SINE Alu -13 300 1 1183 172 31 26 chr17 123844 123898 -89380655 - AluJo SINE Alu -182 130 78 2455 86 7 0 chr17 124205 124508 -89380045 - AluSx SINE Alu -7 305 1 365 97 32 0 chr17 124999 125061 -89379492 + GA-rich Low_complexity Low_complexity 3 66 0 290 212 21 88 chr17 125068 125261 -89379292 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 411 257 9 0 chr17 125313 125418 -89379135 + MLT2B1 LTR ERVL 1 106 -414 2032 144 7 3 chr17 125419 125725 -89378828 - AluSq SINE Alu -6 307 1 1691 184 3 7 chr17 125877 126171 -89378382 + AluJo SINE Alu 1 293 -19 280 274 20 89 chr17 126402 126548 -89378005 - MIR3 SINE MIR -58 150 15 1778 128 74 30 chr17 127180 127478 -89377075 + AluJb SINE Alu 1 311 -1 2338 101 3 3 chr17 127594 127901 -89376652 - AluSx SINE Alu -5 307 1 2631 32 9 25 chr17 128409 128725 -89375828 + AluY SINE Alu 1 311 0 2275 83 9 49 chr17 128890 129216 -89375337 - AluSq SINE Alu 0 313 1 1514 153 6 86 chr17 129967 130148 -89374405 - AluJo SINE Alu -10 302 108 450 0 0 0 chr17 130148 130198 -89374355 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 2349 70 0 11 chr17 130198 130485 -89374068 - AluY SINE Alu -27 284 1 1514 153 6 86 chr17 130485 130628 -89373925 - AluJo SINE Alu -202 110 3 310 167 0 77 chr17 131299 131377 -89373176 - AluYa5 SINE Alu -119 182 111 2056 108 32 0 chr17 131377 131655 -89372898 + AluSx SINE Alu 10 296 -16 2438 57 0 0 chr17 131657 131975 -89372578 + AluY SINE Alu 1 318 0 1935 244 98 51 chr17 132322 132900 -89371653 - L1ME2 LINE L1 -10 6154 5528 1550 165 85 0 chr17 132900 133172 -89371381 + AluJb SINE Alu 1 295 -17 1935 244 98 51 chr17 133172 133375 -89371178 - L1ME2 LINE L1 -636 5528 5336 2108 93 11 0 chr17 134839 135108 -89369445 + AluSx SINE Alu 1 272 -40 2076 51 4 19 chr17 135208 135491 -89369062 + AluY SINE Alu 32 310 0 1764 176 0 38 chr17 135565 135878 -89368675 - AluJb SINE Alu -11 301 1 792 233 30 15 chr17 136175 136377 -89368176 - MER20 DNA MER1_type -14 205 1 2370 56 0 3 chr17 137546 137876 -89366677 + AluY SINE Alu 1 329 0 1768 104 120 0 chr17 138428 138687 -89365866 - AluSx SINE Alu -16 296 7 1766 135 53 0 chr17 139712 139993 -89364560 - AluSx SINE Alu -16 296 1 268 338 14 45 chr17 140108 140293 -89364260 - L1MC/D LINE L1 -299 5822 5688 2373 88 7 0 chr17 140293 140590 -89363963 - AluSx SINE Alu -12 300 2 268 338 14 45 chr17 140590 140661 -89363892 - L1MC/D LINE L1 -433 5688 5616 1370 203 29 22 chr17 142300 142616 -89361937 - L1MC2 LINE L1 -9 6335 6018 275 229 134 89 chr17 142616 142773 -89361780 + MER20 DNA MER1_type 53 216 -3 281 264 0 42 chr17 143205 143349 -89361204 + (GGTTG)n Simple_repeat Simple_repeat 2 139 0 232 300 0 39 chr17 143389 143569 -89360984 + (GGTTG)n Simple_repeat Simple_repeat 2 174 0 195 222 22 0 chr17 143768 143813 -89360740 + MIR SINE MIR 105 150 -112 1707 149 46 4 chr17 143993 144255 -89360298 + AluJb SINE Alu 1 273 -39 372 234 0 0 chr17 144257 144351 -89360202 + (CAGA)n Simple_repeat Simple_repeat 3 96 0 2343 78 0 26 chr17 144680 144987 -89359566 + AluY SINE Alu 1 299 -12 761 35 43 9 chr17 145573 145689 -89358864 + (TTTC)n Simple_repeat Simple_repeat 1 120 0 1843 98 78 0 chr17 145691 145946 -89358607 - AluSx SINE Alu -37 275 1 219 296 70 0 chr17 146207 146278 -89358275 - MIR SINE MIR -173 89 14 554 91 0 71 chr17 146376 146475 -89358078 - AluSp/q SINE Alu -10 303 212 290 154 19 0 chr17 146783 146835 -89357718 - MSTA LTR MaLR 0 428 376 * 395 216 0 0 chr17 146833 146907 -89357646 - AluJ/FRAM SINE Alu -3 299 226 2301 117 8 34 chr17 146924 146974 -89357579 - THE1C LTR MaLR 0 375 325 2225 99 14 0 chr17 146974 147267 -89357286 - AluSg SINE Alu -13 297 1 2301 117 8 34 chr17 147267 147601 -89356952 - THE1C LTR MaLR -50 325 1 2220 102 17 0 chr17 148064 148359 -89356194 - AluSx SINE Alu -12 300 1 691 205 40 145 chr17 148359 148656 -89355897 - MLT2D LTR ERVL -49 365 100 502 105 26 0 chr17 148656 148732 -89355821 + AluS SINE Alu 1 78 -235 2300 96 3 0 chr17 148889 149181 -89355372 + AluSx SINE Alu 1 293 -19 335 156 26 39 chr17 150161 150238 -89354315 - L1MC4 LINE L1 0 8042 7967 223 204 61 0 chr17 150591 150640 -89353913 - MER5A DNA MER1_type -133 56 5 1205 208 4 49 chr17 150698 150790 -89353763 - MER8 DNA MER2_type 0 239 144 1765 143 0 7 chr17 150790 151083 -89353470 + AluJo SINE Alu 1 291 -21 2188 100 10 0 chr17 151086 151385 -89353168 + AluY SINE Alu 1 302 -9 1205 208 4 49 chr17 151385 151533 -89353020 - MER8 DNA MER2_type -97 142 6 287 288 48 8 chr17 151533 151658 -89352895 - L1MC4 LINE L1 -156 7886 7757 * 2009 285 70 43 chr17 151651 152014 -89352539 - L1MC4 LINE L1 -319 7570 7218 1653 171 0 26 chr17 152014 152319 -89352234 - AluJo SINE Alu -15 297 1 2009 285 70 43 chr17 152319 152422 -89352131 - L1MC4 LINE L1 -671 7218 7119 1947 140 7 13 chr17 152422 152729 -89351824 + AluSx SINE Alu 1 305 -7 2009 285 70 43 chr17 152729 153118 -89351435 - L1MC4 LINE L1 -770 7119 6742 2015 132 0 0 chr17 153118 153414 -89351139 + AluSx SINE Alu 1 296 -16 2009 285 70 43 chr17 153414 153858 -89350695 - L1MC4 LINE L1 -1147 6742 6116 1306 156 0 0 chr17 153858 154070 -89350483 + AluSx SINE Alu 1 212 -100 430 121 0 0 chr17 154070 154128 -89350425 + AluSg/x SINE Alu 76 133 -176 1920 131 0 0 chr17 154128 154434 -89350119 + AluSx SINE Alu 1 306 0 2317 80 0 6 chr17 155793 156106 -89348447 - AluY SINE Alu 0 311 1 231 277 67 0 chr17 156114 156233 -89348320 + MER113 DNA MER1_type? 4 130 -391 869 165 0 0 chr17 156233 156366 -89348187 + FLAM_C SINE Alu 1 133 0 1390 115 5 10 chr17 156374 156582 -89347971 + AluJb SINE Alu 94 300 -12 680 278 0 6 chr17 156588 156764 -89347789 + MER113 DNA MER1_type? 296 470 -51 2222 107 3 0 chr17 156992 157301 -89347252 + AluSx SINE Alu 1 310 -2 800 250 38 0 chr17 157319 157503 -89347050 + MLT1A1 LTR MaLR 175 365 0 1368 173 4 15 chr17 157508 157768 -89346785 + MLT1A1-int LTR MaLR 2 258 -1477 2060 90 37 10 chr17 157768 158068 -89346485 + AluSx SINE Alu 1 308 -4 2204 83 10 0 chr17 158345 158635 -89345918 - AluSc SINE Alu -16 293 1 1647 161 3 10 chr17 159263 159554 -89344999 - AluJo SINE Alu -23 289 1 2241 98 0 0 chr17 159575 159871 -89344682 - AluSx SINE Alu -16 296 1 2360 59 0 23 chr17 159875 160181 -89344372 - AluY SINE Alu -12 299 1 327 275 56 112 chr17 160367 160528 -89344025 - L2 LINE L2 0 3313 3179 2140 88 7 3 chr17 160528 160824 -89343729 + AluSg SINE Alu 1 297 -13 327 275 56 112 chr17 160824 161000 -89343553 - L2 LINE L2 -134 3179 2995 1960 110 27 14 chr17 161086 161378 -89343175 - AluSx SINE Alu -16 296 1 1209 120 0 0 chr17 161403 161570 -89342983 + AluY SINE Alu 133 299 -12 264 237 34 0 chr17 161579 161638 -89342915 - MER5A DNA MER1_type -64 125 65 1232 186 8 27 chr17 162447 162710 -89341843 - AluJo SINE Alu -43 269 12 1981 136 3 3 chr17 162726 163100 -89341453 + AluSg SINE Alu 1 374 0 1806 96 3 108 chr17 163586 163921 -89340632 + AluSp SINE Alu 1 300 -13 2133 68 10 3 chr17 163977 164269 -89340284 - AluY SINE Alu -17 294 1 317 429 7 0 chr17 164293 164447 -89340106 - L2 LINE L2 -7 3265 3111 187 274 0 48 chr17 164486 164548 -89340005 + MIR SINE MIR 204 262 0 289 326 18 54 chr17 164962 165186 -89339367 - L2 LINE L2 -222 3050 2835 287 226 0 57 chr17 165194 165318 -89339235 + G-rich Low_complexity Low_complexity 3 119 0 294 270 180 0 chr17 166422 166533 -89338020 + MIR SINE MIR 12 142 -120 2221 93 3 6 chr17 166574 166887 -89337666 - AluSp SINE Alu -1 312 1 1026 126 0 0 chr17 166977 167128 -89337425 - FRAM SINE Alu -26 150 1 254 284 59 10 chr17 167360 167462 -89337091 + L2 LINE L2 3111 3217 -96 2434 65 0 3 chr17 167612 167918 -89336635 + AluSx SINE Alu 1 305 -7 1630 164 51 0 chr17 167997 168290 -89336263 - AluJb SINE Alu -4 308 1 224 309 62 10 chr17 168290 168387 -89336166 - L2 LINE L2 -219 3053 2952 216 320 40 10 chr17 168423 168523 -89336030 - L2 LINE L2 -219 3053 2951 409 238 79 0 chr17 168631 168732 -89335821 + MER20 DNA MER1_type 111 219 0 2094 109 0 16 chr17 168890 169202 -89335351 + AluSx SINE Alu 1 307 -5 873 166 43 21 chr17 170332 170519 -89334034 - AluJo SINE Alu -3 309 119 2468 60 0 0 chr17 170931 171233 -89333320 - AluY SINE Alu -9 302 1 1070 179 82 0 chr17 171322 171517 -89333036 + AluSg SINE Alu 1 211 -99 422 73 0 0 chr17 171517 171572 -89332981 + AluSg/x SINE Alu 76 130 -180 1573 118 114 0 chr17 171575 171820 -89332733 + AluSg SINE Alu 1 273 -37 342 170 0 0 chr17 171935 171988 -89332565 - Alu SINE Alu -16 286 234 351 270 42 112 chr17 172097 172338 -89332215 + L1ME1 LINE L1 5896 6119 -47 347 251 61 28 chr17 172338 172464 -89332089 + L1ME1 LINE L1 6046 6331 -3 2395 66 3 3 chr17 172482 172785 -89331768 + AluY SINE Alu 1 303 -8 1994 152 0 0 chr17 172793 173103 -89331450 + AluSx SINE Alu 1 310 -2 1305 96 5 24 chr17 173215 173423 -89331130 - AluSx SINE Alu -108 204 1 1906 128 7 0 chr17 175104 175400 -89329153 - AluSx SINE Alu -14 298 1 1547 84 13 4 chr17 175693 175920 -89328633 + AluY SINE Alu 1 229 -82 629 99 0 0 chr17 176021 176112 -89328441 - AluJ/FLAM SINE Alu -220 92 2 2328 64 7 3 chr17 176960 177257 -89327296 + AluY SINE Alu 1 298 -13 2302 56 3 30 chr17 177665 177970 -89326583 + AluY SINE Alu 1 297 -14 1642 115 13 102 chr17 178350 178703 -89325850 + AluSx SINE Alu 1 325 0 626 148 109 47 chr17 178703 178831 -89325722 + MER2 DNA MER2_type 3 138 -207 744 168 0 8 chr17 178840 178971 -89325582 - FLAM_C SINE Alu -3 130 1 182 269 191 28 chr17 178979 179120 -89325433 + L2 LINE L2 1506 1669 -1645 2215 94 3 0 chr17 179132 179430 -89325123 - AluSq SINE Alu -14 299 1 615 338 52 7 chr17 179647 179952 -89324601 + L2 LINE L2 2987 3305 -8 5233 66 8 0 chr17 180037 180690 -89323863 + L1PA8 LINE L1 5514 6171 -1 2065 90 7 0 chr17 180696 180973 -89323580 + AluSx SINE Alu 3 281 -31 251 311 82 7 chr17 180987 181122 -89323431 + L1ME LINE L1 5396 5540 -581 2009 96 50 0 chr17 183120 183400 -89321153 - AluSx SINE Alu -18 294 1 247 299 93 10 chr17 183607 183704 -89320849 + L2 LINE L2 3163 3267 -5 2145 104 0 10 chr17 184210 184517 -89320036 + AluSx SINE Alu 1 304 -8 3224 113 10 12 chr17 185703 186200 -89318353 + LTR10D LTR ERV1 1 496 -17 1985 108 40 0 chr17 186205 186501 -89318052 - AluSg1 SINE Alu 0 309 2 1867 103 10 61 chr17 186551 186862 -89317691 - AluSg SINE Alu -14 296 2 2324 100 0 0 chr17 187765 188075 -89316478 + AluSg SINE Alu 1 310 0 2148 92 0 3 chr17 189567 189991 -89314562 - AluSq SINE Alu 0 423 1 2063 106 3 0 chr17 190494 190786 -89313767 - AluSx SINE Alu -13 299 7 548 288 123 14 chr17 191454 191666 -89312887 - MIR SINE MIR -19 243 9 2300 64 7 0 chr17 192005 192301 -89312252 + AluY SINE Alu 1 298 -13 2196 110 7 0 chr17 192676 192985 -89311568 - AluSx SINE Alu -1 311 1 1716 129 50 4 chr17 192985 193265 -89311288 - AluJb SINE Alu -13 299 7 2308 84 0 10 chr17 193337 193647 -89310906 - AluSq SINE Alu -6 307 1 721 288 56 0 chr17 193650 193865 -89310688 - MIR SINE MIR -23 239 13 271 170 0 0 chr17 194151 194204 -89310349 - L1MB4 LINE L1 0 6180 6128 2229 90 3 3 chr17 194366 194678 -89309875 + AluSx SINE Alu 1 312 0 1549 181 4 0 chr17 195521 195798 -89308755 + AluJo SINE Alu 1 278 -34 252 0 0 0 chr17 195807 195835 -89308718 + (TAA)n Simple_repeat Simple_repeat 2 29 0 652 139 124 22 chr17 195837 195974 -89308579 + AluJb SINE Alu 131 281 -31 508 276 112 19 chr17 195997 196211 -89308342 - MIR SINE MIR -6 256 23 2135 111 7 0 chr17 197387 197685 -89306868 + AluSx SINE Alu 1 300 -12 2311 98 0 0 chr17 197685 197991 -89306562 + AluSx SINE Alu 1 306 -6 2437 59 0 3 chr17 198441 198747 -89305806 - AluY SINE Alu -6 305 1 702 49 0 0 chr17 198747 198829 -89305724 - AluY SINE Alu -167 144 63 1195 120 71 0 chr17 198829 199013 -89305540 - AluSx SINE Alu -115 197 1 1593 155 50 7 chr17 200843 201140 -89303413 - AluJo SINE Alu -2 310 1 230 261 0 155 chr17 201152 201294 -89303259 - MER5A DNA MER1_type -63 126 7 443 218 42 31 chr17 201401 201540 -89303013 + MER5B DNA MER1_type 56 178 0 2314 65 3 26 chr17 201741 202049 -89302504 + AluY SINE Alu 1 301 -10 2324 97 0 0 chr17 202671 202969 -89301584 - AluSx SINE Alu -14 298 1 2040 139 0 0 chr17 202973 203267 -89301286 - AluSx SINE Alu -18 294 1 567 194 0 10 chr17 203374 203477 -89301076 - FLAM_A SINE Alu -8 134 33 2251 105 7 0 chr17 203781 204086 -89300467 - AluSq SINE Alu -6 307 1 2404 72 0 7 chr17 204310 204617 -89299936 - AluY SINE Alu -6 305 1 322 251 61 28 chr17 204635 204761 -89299792 - L1ME1 LINE L1 -3 6331 6046 283 261 46 116 chr17 204761 205002 -89299551 - L1ME1 LINE L1 -47 6119 5896 2074 115 3 0 chr17 205701 205988 -89298565 + AluSx SINE Alu 1 288 -24 2364 57 3 3 chr17 206047 206343 -89298210 - AluY SINE Alu -15 296 1 330 272 48 0 chr17 206457 206560 -89297993 + MIR SINE MIR 100 207 -55 1953 121 0 7 chr17 206681 206970 -89297583 - AluJb SINE Alu -25 287 1 2333 76 3 3 chr17 207255 207559 -89296994 - AluY SINE Alu -7 304 1 27 0 0 0 chr17 207627 207654 -89296899 + AT_rich Low_complexity Low_complexity 1 27 0 391 310 187 0 chr17 207659 207814 -89296739 - MER5A DNA MER1_type -2 187 4 484 351 52 60 chr17 208162 208510 -89296043 - L2 LINE L2 0 3272 2928 2177 84 0 0 chr17 209800 210073 -89294480 + AluSq SINE Alu 6 278 -35 322 78 4 4 chr17 210073 210131 -89294422 - Alu SINE Alu -258 44 1 2200 113 0 3 chr17 210574 210885 -89293668 - AluSx SINE Alu -2 310 1 2145 99 3 7 chr17 210885 211177 -89293376 - AluSg SINE Alu -18 292 1 572 228 6 10 chr17 211803 212307 -89292246 + (CA)n Simple_repeat Simple_repeat 1 502 0 2542 46 0 0 chr17 212637 212941 -89291612 + AluY SINE Alu 1 304 -7 292 298 35 0 chr17 213689 213803 -89290750 + CT-rich Low_complexity Low_complexity 3 120 0 2204 96 3 6 chr17 213942 214254 -89290299 - AluSx SINE Alu -1 311 1 2205 105 0 7 chr17 216935 217239 -89287314 + AluSx SINE Alu 1 302 -10 2149 93 28 0 chr17 217321 217612 -89286941 + AluSx SINE Alu 1 299 -13 390 100 0 0 chr17 218951 219011 -89285542 + (TG)n Simple_repeat Simple_repeat 1 60 0 258 252 55 84 chr17 220008 220057 -89284496 - MIR SINE MIR -7 255 206 1890 89 0 4 chr17 220057 220326 -89284227 - AluSx SINE Alu 0 305 38 258 252 55 84 chr17 220326 220453 -89284100 - MIR SINE MIR -56 206 85 1306 82 0 0 chr17 221472 221643 -89282910 + AluSg/x SINE Alu 138 308 -4 189 0 0 0 chr17 222959 222980 -89281573 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 1150 158 0 0 chr17 223607 223790 -89280763 + AluJo SINE Alu 112 294 -18 2386 66 10 3 chr17 224179 224482 -89280071 + AluSx SINE Alu 6 310 -2 2385 73 0 0 chr17 225789 226089 -89278464 - AluSx SINE Alu -12 300 1 1991 105 63 0 chr17 227654 227940 -89276613 - AluSx SINE Alu -8 304 1 2149 100 3 7 chr17 229311 229611 -89274942 - AluSg SINE Alu -11 299 1 753 171 8 0 chr17 229981 230110 -89274443 + FLAM_C SINE Alu 4 133 0 1172 37 0 0 chr17 231341 231475 -89273078 + AluY SINE Alu 1 134 -177 2102 70 49 7 chr17 231475 231761 -89272792 + AluY SINE Alu 1 298 -13 2213 46 49 7 chr17 232432 232717 -89271836 - AluY SINE Alu -14 297 1 304 68 0 0 chr17 232717 232761 -89271792 - Alu SINE Alu -259 44 1 * 344 94 16 16 chr17 232761 232805 -89271748 - AluS SINE Alu -259 44 1 188 330 198 0 chr17 234591 234697 -89269856 - L2 LINE L2 -1 3271 3145 296 339 36 49 chr17 235426 235650 -89268903 - L2 LINE L2 -462 2852 2632 844 169 0 0 chr17 236799 236929 -89267624 + FLAM_C SINE Alu 1 130 -13 524 276 113 23 chr17 236937 237158 -89267395 - MIR SINE MIR 0 262 22 805 157 0 50 chr17 237306 237446 -89267107 + FLAM_C SINE Alu 1 133 0 1668 156 10 30 chr17 237475 237777 -89266776 - AluJb SINE Alu -16 296 1 2244 120 0 0 chr17 238075 238383 -89266170 + AluSx SINE Alu 1 308 -4 473 309 100 60 chr17 238454 238661 -89265892 - L1ME4a LINE L1 -117 6004 5807 2089 99 0 33 chr17 238661 238963 -89265590 - AluSq SINE Alu -21 292 1 473 309 100 60 chr17 238963 239215 -89265338 - L1ME4a LINE L1 -314 5807 5567 2063 101 14 14 chr17 239215 239349 -89265204 + AluSg SINE Alu 1 134 -174 2268 94 0 7 chr17 239349 239656 -89264897 + AluY SINE Alu 1 305 -6 2063 101 14 14 chr17 239656 239829 -89264724 + AluSg SINE Alu 133 308 0 473 309 100 60 chr17 239829 240049 -89264504 - L1ME4a LINE L1 -554 5567 5308 22 35 0 0 chr17 240490 240519 -89264034 + AT_rich Low_complexity Low_complexity 1 29 0 2066 100 28 0 chr17 242287 242576 -89261977 + AluSx SINE Alu 1 297 -15 901 37 0 0 chr17 242936 243044 -89261509 + AluSq/x SINE Alu 1 108 -205 241 250 0 0 chr17 244022 244070 -89260483 - L2 LINE L2 -95 3218 3171 182 361 36 12 chr17 244301 244384 -89260169 - L2 LINE L2 -1165 2149 2065 2252 97 0 3 chr17 244708 245007 -89259546 + AluSx SINE Alu 6 303 -9 1684 63 5 14 chr17 245159 245380 -89259173 - AluY SINE Alu -8 303 85 231 312 9 28 chr17 245570 245679 -89258874 - L2 LINE L2 -507 2807 2701 2500 51 0 10 chr17 245726 246040 -89258513 - AluY SINE Alu 0 311 1 242 282 107 34 chr17 246152 246270 -89258283 - MIR SINE MIR -32 176 46 2110 110 0 27 chr17 246270 246571 -89257982 - AluSq SINE Alu -16 297 5 2118 127 3 6 chr17 246576 246890 -89257663 - AluSq SINE Alu 0 313 1 1273 255 56 32 chr17 247510 247922 -89256631 - MER21B LTR ERV1 -113 750 329 513 221 79 0 chr17 247949 248089 -89256464 - MER21B LTR ERV1 -615 248 98 364 209 70 0 chr17 248130 248216 -89256337 - MER21B LTR ERV1 -767 96 5 2048 129 0 0 chr17 248268 248563 -89255990 - AluSx SINE Alu -17 295 1 843 260 86 33 chr17 249106 249569 -89254984 - L2 LINE L2 -239 3074 2587 433 291 137 21 chr17 250371 250612 -89253941 - MLT1L LTR MaLR -8 607 339 961 144 58 0 chr17 250641 250814 -89253739 - AluSg/x SINE Alu -9 301 119 2159 105 0 3 chr17 250840 251136 -89253417 - AluSx SINE Alu -17 295 1 424 247 153 13 chr17 251148 251298 -89253255 - MLT1L LTR MaLR -326 289 119 333 215 14 97 chr17 252380 252524 -89252029 - L1ME4a LINE L1 -63 6058 5927 355 320 89 50 chr17 252558 252912 -89251641 - L1ME4a LINE L1 -353 5768 5388 2480 44 0 0 chr17 252912 253209 -89251344 - AluY SINE Alu -14 297 1 355 320 89 50 chr17 253209 253339 -89251214 - L1ME4a LINE L1 -733 5388 5265 662 318 68 85 chr17 253347 253707 -89250846 - L1ME4a LINE L1 -896 5250 4900 1586 210 6 16 chr17 253707 253883 -89250670 - AluJb SINE Alu -1 311 138 2282 95 0 25 chr17 253883 254200 -89250353 - AluSq SINE Alu -4 309 1 1586 210 6 16 chr17 254200 254337 -89250216 - AluJb SINE Alu -174 138 1 662 318 68 85 chr17 254337 254491 -89250062 - L1ME4a LINE L1 -1246 4900 4745 790 261 77 26 chr17 254914 255225 -89249328 + L1MC4a LINE L1 5607 5933 -1875 314 326 27 34 chr17 255247 255394 -89249159 + L1ME4a LINE L1 5974 6119 -2 344 307 51 7 chr17 256797 256934 -89247619 + L2 LINE L2 1596 1738 -1576 293 219 27 14 chr17 258666 258739 -89245814 + L2 LINE L2 3239 3312 -1 333 291 131 23 chr17 258755 258930 -89245623 + MIR SINE MIR 59 252 -10 21 0 0 0 chr17 259039 259060 -89245493 + AT_rich Low_complexity Low_complexity 1 21 0 1971 139 3 0 chr17 259070 259357 -89245196 - AluSx SINE Alu -24 288 1 2296 97 0 0 chr17 259359 259659 -89244894 - AluSx SINE Alu -10 302 3 1786 158 0 3 chr17 259664 259948 -89244605 - AluJb SINE Alu -17 295 13 2173 89 3 26 chr17 260004 260307 -89244246 - AluSx SINE Alu -16 296 1 229 94 0 0 chr17 260643 260675 -89243878 + Alu SINE Alu 6 37 -263 1306 82 0 0 chr17 261850 262021 -89242532 + AluSg/x SINE Alu 136 306 -4 189 0 0 0 chr17 263335 263356 -89241197 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 1134 164 0 0 chr17 263982 264165 -89240388 + AluJo SINE Alu 112 294 -18 2312 76 10 3 chr17 264555 264857 -89239696 + AluSx SINE Alu 9 312 0 1806 243 98 51 chr17 265206 265784 -89238769 - L1ME2 LINE L1 -10 6154 5528 1426 167 93 0 chr17 265784 266054 -89238499 + AluJb SINE Alu 1 295 -17 1806 243 98 51 chr17 266054 266257 -89238296 - L1ME2 LINE L1 -636 5528 5336 2282 95 10 0 chr17 267721 268026 -89236527 + AluSx SINE Alu 1 308 -4 2291 84 3 0 chr17 268128 268424 -89236129 - AluSq SINE Alu -16 297 1 2092 98 0 0 chr17 269248 269522 -89235031 - AluSq SINE Alu -39 274 1 236 320 20 68 chr17 269911 270161 -89234392 + L2 LINE L2 2817 3054 -218 188 274 0 48 chr17 270570 270632 -89233921 - MIR SINE MIR 0 262 204 334 429 7 0 chr17 270671 270825 -89233728 + L2 LINE L2 3111 3265 -7 1488 64 5 0 chr17 270849 271037 -89233516 + AluY SINE Alu 1 189 -122 204 320 190 34 chr17 272903 273172 -89231381 + L2 LINE L2 2932 3242 -30 347 288 129 71 chr17 274250 274829 -89229724 + L1M2 LINE L1 757 1369 -5480 303 313 98 0 chr17 276038 276150 -89228403 + MIR SINE MIR 52 174 -88 2024 131 0 3 chr17 276705 277002 -89227551 + AluSx SINE Alu 1 296 -16 201 224 0 0 chr17 278170 278219 -89226334 - MIR SINE MIR -79 129 81 209 281 226 7 chr17 281681 281827 -89222726 - L2 LINE L2 -4 3268 3091 2204 134 0 0 chr17 282006 282313 -89222240 + AluSx SINE Alu 1 307 -5 794 105 48 32 chr17 282949 283073 -89221480 + FLAM_C SINE Alu 1 126 -17 1602 166 32 3 chr17 283089 283372 -89221181 + AluJo SINE Alu 1 291 -21 2211 81 10 3 chr17 283572 283868 -89220685 + AluY SINE Alu 1 298 -13 1987 119 0 32 chr17 283887 284197 -89220356 + AluSx SINE Alu 1 300 -12 412 305 26 26 chr17 289142 289293 -89215260 - MIR3 SINE MIR -55 153 3 257 268 0 0 chr17 289702 289758 -89214795 + C-rich Low_complexity Low_complexity 4 59 0 1858 147 0 10 chr17 289894 290193 -89214360 + AluJb SINE Alu 4 299 -13 721 283 91 8 chr17 291280 291641 -89212912 - MER90 LTR ERV1 -63 551 161 214 371 0 0 chr17 291805 291867 -89212686 + L2 LINE L2 3242 3303 -10 2123 95 3 14 chr17 291867 292162 -89212391 + AluSx SINE Alu 1 292 -20 319 234 36 36 chr17 292408 292519 -89212034 - MER103 DNA DNA -46 120 10 503 243 40 7 chr17 293572 293724 -89210829 + L1ME4a LINE L1 5961 6117 -4 1408 120 9 40 chr17 294919 295144 -89209409 + AluSg/x SINE Alu 93 310 0 2093 122 3 0 chr17 296071 296367 -89208186 - AluSx SINE Alu -11 301 5 2074 97 0 27 chr17 296371 296669 -89207884 - AluSx SINE Alu -22 290 1 1815 189 20 40 chr17 296703 297057 -89207496 + MER7A DNA MER2_type 2 346 0 563 165 0 10 chr17 297280 297377 -89207176 + AluS SINE Alu 1 96 -216 458 20 0 0 chr17 297502 297552 -89207001 + AluY SINE Alu 66 115 -196 * 645 83 0 0 chr17 297549 297633 -89206920 - AluS SINE Alu -229 84 1 1774 206 107 52 chr17 297910 298144 -89206409 - L1ME2 LINE L1 -59 6105 5885 2504 55 3 0 chr17 298144 298454 -89206099 - AluY SINE Alu 0 311 1 1774 206 107 52 chr17 298454 298855 -89205698 - L1ME2 LINE L1 -279 5885 5435 613 188 167 7 chr17 298861 299005 -89205548 - AluJo SINE Alu -109 203 37 520 150 37 1 chr17 299006 299133 -89205420 - L1M1 LINE L1 -732 5430 5299 350 292 11 0 chr17 299265 299354 -89205199 - L1ME2 LINE L1 -957 5189 5100 548 138 0 11 chr17 299474 299568 -89204985 + LTR23 LTR ERV1 313 405 -32 22 35 0 0 chr17 299575 299604 -89204949 + AT_rich Low_complexity Low_complexity 1 29 0 2159 112 0 40 chr17 299632 299955 -89204598 - AluSx SINE Alu -2 310 1 302 261 56 99 chr17 299956 299981 -89204572 - MIR SINE MIR -49 213 188 2617 33 0 23 chr17 299981 300286 -89204267 - AluY SINE Alu -13 298 1 302 261 56 99 chr17 300286 300421 -89204132 - MIR SINE MIR -74 188 60 2225 112 3 0 chr17 301377 301673 -89202880 + AluSq SINE Alu 1 297 -16 545 204 18 0 chr17 302260 302373 -89202180 - FLAM_A SINE Alu -18 115 1 21 36 0 0 chr17 302767 302795 -89201758 + AT_rich Low_complexity Low_complexity 1 28 0 2326 78 41 0 chr17 304233 304528 -89200025 - AluSp SINE Alu -2 311 5 2011 93 7 7 chr17 304986 305256 -89199297 - AluSp SINE Alu 0 313 44 23 0 0 0 chr17 305380 305403 -89199150 + AT_rich Low_complexity Low_complexity 1 23 0 2188 102 7 0 chr17 305403 305697 -89198856 + AluSp SINE Alu 1 296 -17 962 196 38 14 chr17 305820 306029 -89198524 - AluJb SINE Alu -13 299 86 615 231 98 47 chr17 306546 306684 -89197869 - MER4C LTR ERV1 0 687 557 3619 67 34 0 chr17 306684 307180 -89197373 + LTR10D LTR ERV1 1 513 0 615 231 98 47 chr17 307180 307368 -89197185 - MER4C LTR ERV1 -130 557 177 341 200 100 0 chr17 307373 307453 -89197100 - MER4C LTR ERV1 -201 264 177 257 224 158 0 chr17 307458 307534 -89197019 - MER4C LTR ERV1 -201 264 177 341 200 100 0 chr17 307539 307619 -89196934 - MER4C LTR ERV1 -201 264 177 308 225 100 0 chr17 307624 307704 -89196849 - MER4C LTR ERV1 -201 264 177 327 213 100 0 chr17 307709 307789 -89196764 - MER4C LTR ERV1 -201 264 177 284 179 167 0 chr17 307794 307872 -89196681 - MER4C LTR ERV1 -201 264 174 * 654 152 54 121 chr17 307848 308193 -89196360 - MER4C LTR ERV1 -283 381 1 198 230 23 126 chr17 311396 311483 -89193070 + MIR SINE MIR 79 156 -106 488 291 105 0 chr17 311864 312036 -89192517 + MIR SINE MIR 59 248 -14 181 279 81 62 chr17 312858 312973 -89191580 - MIR SINE MIR -50 212 92 612 196 8 45 chr17 312973 313106 -89191447 - FLAM_A SINE Alu -5 128 1 181 279 81 62 chr17 313106 313151 -89191402 - MIR SINE MIR -170 92 49 274 309 204 25 chr17 314613 314976 -89189577 + L2 LINE L2 2046 2473 -841 519 178 11 0 chr17 318999 319089 -89185464 - FLAM_A SINE Alu -41 101 11 1731 143 66 21 chr17 319288 319575 -89184978 + AluJb SINE Alu 1 300 -12 783 134 15 22 chr17 319584 319718 -89184835 + FLAM_C SINE Alu 1 133 0 1760 124 0 0 chr17 323107 323349 -89181204 - AluSq SINE Alu -2 311 70 239 125 0 0 chr17 323349 323389 -89181164 - Alu SINE Alu -135 168 129 187 264 126 35 chr17 323413 323500 -89181053 + MIR SINE MIR 57 151 -111 824 100 0 50 chr17 323544 323684 -89180869 + FLAM_C SINE Alu 1 133 0 2109 98 35 41 chr17 323693 324008 -89180545 + AluSq SINE Alu 1 313 0 1881 153 21 0 chr17 324315 324603 -89179950 + AluJb SINE Alu 1 294 -18 2416 84 7 0 chr17 324786 325085 -89179468 + AluSx SINE Alu 1 301 -11 215 262 0 117 chr17 325420 325523 -89179030 - MIR SINE MIR -107 155 65 2494 87 0 10 chr17 325870 326181 -89178372 + AluSx SINE Alu 1 308 -4 2312 120 0 0 chr17 326228 326537 -89178016 + AluSg SINE Alu 1 309 -1 305 183 211 29 chr17 326875 326979 -89177574 - MER5A DNA MER1_type -3 186 64 2139 105 3 43 chr17 327175 327499 -89177054 - AluSx SINE Alu -1 311 1 2185 106 39 0 chr17 327870 328153 -89176400 + AluSx SINE Alu 1 294 -18 667 161 24 0 chr17 328200 328324 -89176229 + FLAM_C SINE Alu 1 127 -6 1531 174 68 20 chr17 328568 328861 -89175692 + AluJo SINE Alu 1 307 -5 879 144 0 0 chr17 328864 328996 -89175557 + FLAM_C SINE Alu 2 133 0 25 0 0 0 chr17 330585 330610 -89173943 + GC_rich Low_complexity Low_complexity 1 25 0 186 174 0 0 chr17 330777 330823 -89173730 + G-rich Low_complexity Low_complexity 4 49 0 2131 83 4 0 chr17 331385 331679 -89172874 + AluSx SINE Alu 20 314 0 322 170 50 70 chr17 331972 332072 -89172481 + MIR3 SINE MIR 110 207 -1 2625 64 0 0 chr17 332808 333119 -89171434 + AluY SINE Alu 1 311 0 227 280 153 8 chr17 333380 333498 -89171055 + L2 LINE L2 3164 3298 -15 465 286 127 18 chr17 333515 333610 -89170943 - MIR SINE MIR -11 251 168 264 30 0 0 chr17 333610 333643 -89170910 + (TG)n Simple_repeat Simple_repeat 2 34 0 465 286 127 18 chr17 333643 333767 -89170786 - MIR SINE MIR -94 168 8 350 264 19 38 chr17 333928 334034 -89170519 - MIR SINE MIR -46 216 113 1483 186 3 39 chr17 334657 334963 -89169590 + AluJb SINE Alu 3 297 -15 576 216 78 39 chr17 335135 335367 -89169186 + AluJo SINE Alu 5 245 -67 303 26 0 0 chr17 335367 335405 -89169148 + AluJ/FLAM SINE Alu 39 76 -226 532 234 65 50 chr17 335405 335606 -89168947 + AluJb SINE Alu 11 214 -98 461 103 0 0 chr17 335603 335671 -89168882 + AluJ/FLAM SINE Alu 11 78 -234 * 1753 146 38 0 chr17 335671 335932 -89168621 + AluJb SINE Alu 13 283 -29 423 0 0 0 chr17 335932 335979 -89168574 + (CA)n Simple_repeat Simple_repeat 2 48 0 336 293 115 16 chr17 336368 336559 -89167994 + MIR SINE MIR 21 230 -32 1334 200 35 24 chr17 337013 337303 -89167250 + AluJb SINE Alu 1 293 -19 608 152 9 0 chr17 337318 337423 -89167130 - FLAM_C SINE Alu -37 106 1 2330 57 0 4 chr17 337506 337786 -89166767 + AluY SINE Alu 31 309 -2 1641 164 43 4 chr17 337879 338159 -89166394 + AluJo SINE Alu 1 291 -21 328 93 0 0 chr17 338281 338324 -89166229 + Alu SINE Alu 1 43 -258 1501 71 6 0 chr17 338324 338506 -89166047 + AluSg/x SINE Alu 125 307 -5 243 0 0 0 chr17 338506 338533 -89166020 + (TA)n Simple_repeat Simple_repeat 1 27 0 368 239 28 9 chr17 338534 338594 -89165959 + L1ME LINE L1 5708 5772 -349 2362 110 0 0 chr17 338594 338902 -89165651 + AluSx SINE Alu 1 308 -4 368 239 28 9 chr17 338902 338950 -89165603 + L1ME LINE L1 5772 5818 -303 906 136 155 7 chr17 338954 339109 -89165444 + FRAM SINE Alu 1 172 -4 827 103 0 9 chr17 339134 339241 -89165312 - AluSg/x SINE Alu -129 181 76 1526 120 0 5 chr17 339241 339450 -89165103 - AluSx SINE Alu -100 212 5 1234 178 54 25 chr17 339469 339711 -89164842 - AluJo SINE Alu -25 287 39 2272 73 16 36 chr17 339761 340064 -89164489 - AluSg SINE Alu -13 297 1 536 15 0 0 chr17 340306 340394 -89164159 + AluY SINE Alu 217 304 0 2483 62 3 0 chr17 340404 340696 -89163857 + AluY SINE Alu 1 293 -18 203 0 37 0 chr17 340696 340723 -89163830 + (TA)n Simple_repeat Simple_repeat 2 29 0 412 186 17 68 chr17 341571 341689 -89162864 + MER20B DNA MER1_type 31 142 -641 1162 140 0 0 chr17 342875 343039 -89161514 - AluSg/x SINE Alu -15 295 132 369 0 0 0 chr17 343044 343085 -89161468 + (TATG)n Simple_repeat Simple_repeat 2 42 0 2128 109 3 32 chr17 343085 343390 -89161163 - AluSx SINE Alu -16 296 1 360 298 111 65 chr17 344139 344240 -89160313 + L2 LINE L2 2927 3022 -291 2509 89 0 0 chr17 344240 344553 -89160000 + AluSp SINE Alu 1 313 0 360 298 111 65 chr17 344553 344820 -89159733 + L2 LINE L2 3022 3312 -1 463 270 20 77 chr17 344833 345029 -89159524 + MIR SINE MIR 78 262 0 2737 163 62 23 chr17 345053 345492 -89159061 + L1ME1 LINE L1 5510 5977 -189 2481 91 0 0 chr17 345492 345799 -89158754 + AluSx SINE Alu 1 307 -5 2737 163 62 23 chr17 345799 345922 -89158631 + L1ME1 LINE L1 5977 6094 -72 1491 127 138 15 chr17 345949 346217 -89158336 - AluSx SINE Alu -1 301 1 240 236 69 0 chr17 346220 346292 -89158261 + L1ME1 LINE L1 6082 6158 -8 325 242 109 70 chr17 346490 346618 -89157935 - L1ME4a LINE L1 -195 5926 5794 633 72 0 52 chr17 346628 346725 -89157828 - FRAM SINE Alu -30 146 55 339 178 41 14 chr17 346776 346849 -89157704 - AluSc SINE Alu -105 194 120 22 70 0 0 chr17 346917 346960 -89157593 + AT_rich Low_complexity Low_complexity 1 43 0 2607 49 7 0 chr17 347395 347699 -89156854 + AluSg SINE Alu 1 306 -4 2339 81 0 16 chr17 348986 349293 -89155260 - AluSx SINE Alu -10 302 1 2395 97 3 0 chr17 349370 349680 -89154873 - AluSx SINE Alu -1 311 1 1093 99 0 7 chr17 349838 349979 -89154574 - FRAM SINE Alu -19 157 18 481 146 0 0 chr17 350247 350329 -89154224 - L1PB3 LINE L1 0 6154 6073 2161 100 3 3 chr17 350572 350873 -89153680 + AluSg SINE Alu 1 301 -9 2199 97 0 0 chr17 350935 351233 -89153320 + AluY SINE Alu 1 298 -13 1266 162 22 13 chr17 351836 352064 -89152489 - AluJb SINE Alu -25 287 58 198 0 0 0 chr17 352077 352099 -89152454 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1644 100 151 12 chr17 352102 352353 -89152200 - AluSx SINE Alu -16 286 1 251 159 48 0 chr17 352354 352417 -89152136 - L1MA8 LINE L1 -1 6290 6225 2068 120 7 0 chr17 352878 353186 -89151367 - AluSq SINE Alu -3 310 1 382 265 38 30 chr17 353355 353487 -89151066 - L2 LINE L2 0 3272 3140 335 296 45 56 chr17 353613 353792 -89150761 - L2 LINE L2 0 3313 3137 362 323 0 23 chr17 353918 354048 -89150505 - L2 LINE L2 -245 3068 2942 4483 155 78 35 chr17 354081 354995 -89149558 + LTR13 LTR ERVK 2 954 0 1614 182 23 10 chr17 355175 355483 -89149070 - AluJo SINE Alu 0 312 1 2310 85 7 0 chr17 355505 355810 -89148743 - AluSq SINE Alu -6 307 1 245 310 9 35 chr17 355907 356023 -89148530 - Charlie7 DNA MER1_type -2499 113 1 266 290 154 43 chr17 356033 356312 -89148241 - L2 LINE L2 -557 2757 2448 223 259 52 0 chr17 356369 356427 -89148126 - L2 LINE L2 -61 3211 3151 2233 101 0 0 chr17 356496 356793 -89147760 - AluSc SINE Alu -12 297 1 22 0 0 0 chr17 356803 356825 -89147728 + AT_rich Low_complexity Low_complexity 1 22 0 1508 157 0 88 chr17 357137 357307 -89147246 - AluJo SINE Alu -21 291 160 1905 122 0 17 chr17 357307 357595 -89146958 - AluSc SINE Alu -26 283 1 1508 157 0 88 chr17 357595 357743 -89146810 - AluJo SINE Alu -152 160 1 332 73 0 0 chr17 359089 359130 -89145423 + Alu SINE Alu 23 63 -240 812 134 0 0 chr17 359130 359249 -89145304 + AluJb SINE Alu 182 300 -12 1608 183 0 10 chr17 359831 360126 -89144427 - AluSx SINE Alu -20 292 1 2177 93 6 13 chr17 360355 360666 -89143887 - AluSg SINE Alu -1 309 1 649 258 27 5 chr17 360674 360860 -89143693 - AluJo SINE Alu -3 309 120 1574 125 29 96 chr17 361777 362090 -89142463 - AluJo SINE Alu -19 293 2 1715 177 0 6 chr17 362118 362429 -89142124 + AluSx SINE Alu 1 309 -3 2081 148 118 0 chr17 362453 362817 -89141736 - MSTA LTR MaLR -21 407 1 375 161 0 0 chr17 362978 363034 -89141519 + AluS SINE Alu 2 57 -244 6375 50 16 32 chr17 363388 364264 -89140289 - SVA Other Other 0 1386 525 472 267 0 0 chr17 365050 365155 -89139398 - MIR SINE MIR -60 148 44 541 206 41 0 chr17 366299 366396 -89138157 - Tigger3(Golem) DNA MER2_type 0 3029 2929 1661 118 103 79 chr17 366399 366728 -89137825 - MER1B DNA MER1_type 0 337 1 367 218 26 0 chr17 366745 366823 -89137730 - Tigger3(Golem) DNA MER2_type -2949 80 1 396 283 153 17 chr17 366888 367065 -89137488 - MIR SINE MIR -53 209 9 927 259 59 96 chr17 367072 367562 -89136991 + L2 LINE L2 2399 2870 -444 256 318 110 9 chr17 367881 368198 -89136355 + L2 LINE L2 2887 3307 -6 345 300 135 42 chr17 368206 368466 -89136087 + L2 LINE L2 2939 3222 -50 1169 171 0 0 chr17 368601 368788 -89135765 + AluJo SINE Alu 1 187 -125 2067 112 10 0 chr17 371907 372210 -89132343 - AluSx SINE Alu -6 306 1 259 315 136 0 chr17 372631 372759 -89131794 - MIR SINE MIR -58 150 38 508 271 91 89 chr17 372963 373324 -89131229 - L2 LINE L2 -1 3271 2910 803 159 0 0 chr17 373837 373963 -89130590 - FLAM_C SINE Alu -16 127 2 2143 188 124 8 chr17 373965 374507 -89130046 - L1MC4a LINE L1 -289 7519 6940 1491 172 39 26 chr17 374513 374821 -89129732 + AluJb SINE Alu 1 312 0 1136 122 13 258 chr17 377195 377738 -89126815 + L1MC4 LINE L1 7491 7900 -142 1112 165 37 0 chr17 377743 377931 -89126622 + AluJb SINE Alu 1 195 -117 291 93 0 0 chr17 377931 377974 -89126579 + (GGGGA)n Simple_repeat Simple_repeat 1 43 0 242 172 52 0 chr17 377974 378032 -89126521 + A-rich Low_complexity Low_complexity 5 65 0 467 203 0 3 chr17 378070 378165 -89126388 + L1MC4 LINE L1 7889 8040 -2 408 40 0 0 chr17 378175 378225 -89126328 + (TCTCCC)n Simple_repeat Simple_repeat 6 55 0 287 149 0 0 chr17 378347 378394 -89126159 - AluSp SINE Alu -128 175 129 * 363 137 0 0 chr17 378393 378444 -89126109 - AluSp SINE Alu -124 179 129 262 128 85 0 chr17 378443 378490 -89126063 - AluJ/F(R)AM SINE Alu -123 179 129 * 293 200 20 0 chr17 378489 378539 -89126014 - AluSc SINE Alu -122 177 127 * 354 137 0 0 chr17 378538 378589 -89125964 - AluSc SINE Alu -122 177 127 251 149 85 0 chr17 378588 378635 -89125918 - AluYb8 SINE Alu -130 178 128 * 267 200 20 0 chr17 378634 378684 -89125869 - AluJ/F(R)AM SINE Alu -123 179 129 * 316 62 83 0 chr17 378683 378731 -89125822 - AluY SINE Alu -123 178 127 279 89 89 0 chr17 378731 378776 -89125777 - AluY SINE Alu -125 176 128 * 304 160 20 0 chr17 378775 378825 -89125728 - AluJ/F(R)AM SINE Alu -123 179 129 * 367 98 0 0 chr17 378824 378875 -89125678 - AluSc SINE Alu -122 177 127 * 388 98 0 0 chr17 378874 378925 -89125628 - AluJ/F(R)AM SINE Alu -123 179 129 341 120 20 0 chr17 378924 378974 -89125579 - AluJ/F(R)AM SINE Alu -123 179 129 * 276 106 85 0 chr17 378973 379020 -89125533 - AluYa5 SINE Alu -123 178 128 * 273 106 85 0 chr17 379019 379066 -89125487 - AluY SINE Alu -123 178 128 * 279 200 20 0 chr17 379065 379115 -89125438 - AluJ/F(R)AM SINE Alu -123 179 129 * 371 98 0 0 chr17 379114 379165 -89125388 - AluJ/F(R)AM SINE Alu -123 179 129 371 209 13 50 chr17 379164 379364 -89125189 - AluJ/F(R)AM SINE Alu -123 179 129 356 118 0 0 chr17 379363 379414 -89125139 - AluSp SINE Alu -124 179 129 * 360 118 0 0 chr17 379413 379464 -89125089 - AluJ/F(R)AM SINE Alu -123 179 129 360 118 0 0 chr17 379463 379514 -89125039 - AluSc SINE Alu -122 177 127 329 143 0 0 chr17 379514 379563 -89124990 - AluSc SINE Alu -123 176 128 371 98 0 0 chr17 379563 379614 -89124939 - AluSc SINE Alu -122 177 127 346 102 0 0 chr17 379614 379663 -89124890 - AluSc SINE Alu -123 176 128 371 98 0 0 chr17 379663 379714 -89124839 - AluJ/F(R)AM SINE Alu -123 179 129 340 118 0 0 chr17 379713 379764 -89124789 - AluJ/F(R)AM SINE Alu -123 179 129 * 358 98 0 0 chr17 379763 379814 -89124739 - AluSc SINE Alu -122 177 127 548 93 0 0 chr17 380495 380570 -89123983 - Alu SINE Alu -9 300 226 956 158 0 6 chr17 380571 380729 -89123824 - AluSq SINE Alu -156 157 1 326 109 0 0 chr17 381034 381080 -89123473 - Alu SINE Alu -256 46 1 360 299 55 44 chr17 381093 381367 -89123186 - L1ME LINE L1 -302 5819 5543 330 257 50 7 chr17 381447 381587 -89122966 - L1ME LINE L1 -755 5391 5246 2181 97 3 10 chr17 381755 382065 -89122488 + AluSx SINE Alu 5 312 0 200 128 64 21 chr17 382271 382318 -89122235 + CT-rich Low_complexity Low_complexity 4 52 0 1372 107 62 9 chr17 382586 382810 -89121743 - AluJo SINE Alu -76 236 1 554 170 21 0 chr17 383708 383802 -89120751 + AluSg/x SINE Alu 208 303 -6 324 287 156 6 chr17 386723 386890 -89117663 - L1ME4a LINE L1 0 6121 5930 1418 242 53 37 chr17 386908 387395 -89117158 - L1MB7 LINE L1 -19 6165 5671 1429 208 40 9 chr17 389194 389516 -89115037 - L1ME4a LINE L1 -466 5718 5387 1716 72 0 0 chr17 389532 389753 -89114800 + AluSq SINE Alu 1 221 -92 7574 39 2 0 chr17 389886 391244 -89113309 - L1PA4 LINE L1 -1 6154 4795 26867 31 4 7 chr17 391244 394489 -89110064 + L1PA4 LINE L1 1575 4810 -1336 287 247 65 0 chr17 394502 394579 -89109974 - HsTC2 DNA Tc2 -546 1352 1271 712 258 117 11 chr17 394586 394869 -89109684 - L1MC4 LINE L1 0 8042 7730 25 83 0 0 chr17 395107 395167 -89109386 + AT_rich Low_complexity Low_complexity 1 60 0 25 0 0 0 chr17 395731 395756 -89108797 + AT_rich Low_complexity Low_complexity 1 25 0 763 212 0 91 chr17 395831 395858 -89108695 + L1MA10 LINE L1 6124 6152 -182 1979 118 3 7 chr17 395858 396169 -89108384 - AluSg SINE Alu 0 310 2 763 212 0 91 chr17 396169 396372 -89108181 + L1MA10 LINE L1 6152 6333 -1 227 195 0 0 chr17 396708 396749 -89107804 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 1817 170 0 0 chr17 396843 397143 -89107410 + AluSx SINE Alu 1 300 -12 286 267 61 30 chr17 397337 397468 -89107085 + MIR SINE MIR 77 211 -51 1652 28 0 42 chr17 398296 398508 -89106045 + L1PA3 LINE L1 5953 6155 0 404 254 60 0 chr17 400109 400243 -89104310 + L1MD2 LINE L1 6206 6347 -12 798 168 32 32 chr17 400244 400434 -89104119 + HsTC2 DNA Tc2 1605 1794 -104 1881 103 3 88 chr17 401655 401975 -89102578 - AluSx SINE Alu -19 293 1 9672 31 14 154 chr17 402055 403656 -89100897 + SVA Other Other 7 1383 -3 200 241 148 111 chr17 404203 404419 -89100134 - MIR SINE MIR -37 225 2 1757 172 7 0 chr17 405096 405399 -89099154 + AluJb SINE Alu 1 305 -7 1909 134 0 19 chr17 407762 408076 -89096477 - AluSx SINE Alu -4 308 1 1668 168 7 10 chr17 408076 408372 -89096181 - AluJb SINE Alu -17 295 1 25 51 0 0 chr17 408415 408454 -89096099 + AT_rich Low_complexity Low_complexity 1 39 0 350 171 66 0 chr17 408481 408557 -89095996 - L1MB8 LINE L1 -2 6176 6096 2657 181 18 30 chr17 408577 409146 -89095407 - L1MB4 LINE L1 -12 6168 5607 2103 94 23 3 chr17 410420 410719 -89093834 - AluSx SINE Alu -7 305 1 339 273 104 50 chr17 411209 411437 -89093116 - MIR SINE MIR -19 243 23 2414 68 0 0 chr17 413069 413380 -89091173 - AluY SINE Alu 0 311 1 226 228 140 0 chr17 413487 413544 -89091009 + L2 LINE L2 3207 3271 -1 374 159 29 14 chr17 413815 413884 -89090669 - MLT1K LTR MaLR -8 580 511 333 0 0 0 chr17 413998 414035 -89090518 + (GA)n Simple_repeat Simple_repeat 2 38 0 387 0 0 0 chr17 414058 414101 -89090452 + (TG)n Simple_repeat Simple_repeat 2 44 0 1887 100 59 0 chr17 414234 414504 -89090049 + AluSc SINE Alu 11 296 -13 305 305 104 19 chr17 414645 414799 -89089754 - MIR SINE MIR -79 183 17 345 130 40 30 chr17 414831 414931 -89089622 + CT-rich Low_complexity Low_complexity 2 102 0 1912 143 13 0 chr17 414954 415262 -89089291 - AluSx SINE Alu 0 312 1 2286 96 0 0 chr17 416296 416599 -89087954 - AluSc SINE Alu -6 303 1 1702 163 10 10 chr17 416602 416896 -89087657 - AluSx SINE Alu -14 298 5 253 188 125 0 chr17 417931 417995 -89086558 + MER94 DNA DNA 4 75 -59 2204 119 6 26 chr17 418141 418485 -89086068 - MER1B DNA MER1_type 0 337 1 249 260 185 17 chr17 418741 418914 -89085639 + L2 LINE L2 1597 1798 -1516 867 198 8 118 chr17 418916 419153 -89085400 - MER58A DNA MER1_type -3 221 11 1068 282 72 32 chr17 419177 419281 -89085272 + L2 LINE L2 1839 1937 -1377 1719 110 0 4 chr17 419281 419518 -89085035 - AluSg SINE Alu -19 291 56 2235 98 0 0 chr17 419523 419829 -89084724 - AluSq SINE Alu -7 306 1 1068 282 72 32 chr17 419829 420189 -89084364 + L2 LINE L2 1940 2328 -986 2152 98 3 0 chr17 420193 420488 -89084065 - AluSq SINE Alu -17 296 1 1130 233 32 0 chr17 420488 420737 -89083816 - MSTD-int LTR MaLR -1477 258 2 1166 194 85 62 chr17 420737 421191 -89083362 - MSTD LTR MaLR -2 426 1 768 311 81 58 chr17 421258 421833 -89082720 + L2 LINE L2 2370 2981 -332 2293 78 0 0 chr17 421833 422127 -89082426 + AluY SINE Alu 1 294 -17 768 311 81 58 chr17 422127 422467 -89082086 + L2 LINE L2 2981 3312 -1 1763 148 18 0 chr17 422993 423277 -89081276 - AluJb SINE Alu -13 299 11 309 26 0 0 chr17 423286 423324 -89081229 + (CCTG)n Simple_repeat Simple_repeat 2 39 0 42718 59 4 4 chr17 425782 431488 -89073065 - L1P2 LINE L1 -439 5715 11 313 285 40 99 chr17 431540 431691 -89072862 + MIR3 SINE MIR 56 197 -11 2287 88 0 3 chr17 431799 432105 -89072448 - AluSq SINE Alu -8 305 1 1625 156 0 8 chr17 432444 432700 -89071853 - AluJb SINE Alu -54 258 5 1650 182 7 0 chr17 435095 435392 -89069161 - AluJb SINE Alu -13 299 1 292 194 0 0 chr17 435658 435720 -89068833 + L1MA3 LINE L1 5104 5165 -981 519 118 24 0 chr17 435774 435859 -89068694 - L1M LINE L1 -784 5396 5310 2093 181 37 18 chr17 437244 437698 -89066855 + L1MA3 LINE L1 5838 6300 -5 1269 172 38 34 chr17 437814 438105 -89066448 - AluJo SINE Alu -20 292 1 189 94 0 0 chr17 439747 439779 -89064774 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2069 90 11 0 chr17 439782 440060 -89064493 - AluSp SINE Alu -32 281 1 279 0 0 0 chr17 440225 440256 -89064297 + (TG)n Simple_repeat Simple_repeat 1 31 0 2202 92 0 19 chr17 440273 440590 -89063963 - AluY SINE Alu 0 311 1 198 0 0 0 chr17 442267 442289 -89062264 + (TG)n Simple_repeat Simple_repeat 1 22 0 2007 90 14 4 chr17 442289 442568 -89061985 - AluSq SINE Alu -31 282 1 183 216 0 0 chr17 443297 443334 -89061219 + L2 LINE L2 3232 3268 -4 1654 166 7 24 chr17 443380 443676 -89060877 - AluSx SINE Alu -21 291 1 1347 143 4 30 chr17 443841 444071 -89060482 - AluJo SINE Alu -16 296 73 1151 211 12 37 chr17 444326 444568 -89059985 - L1MC1 LINE L1 0 6333 6098 946 168 0 6 chr17 444572 444733 -89059820 - FAM SINE Alu -10 175 16 1793 170 10 3 chr17 444775 445081 -89059472 + AluJb SINE Alu 1 308 -4 273 151 0 0 chr17 445089 445142 -89059411 + GA-rich Low_complexity Low_complexity 4 56 0 2099 95 7 14 chr17 445665 445961 -89058592 - AluSg SINE Alu -16 294 1 2066 100 0 27 chr17 446442 446742 -89057811 - AluSq SINE Alu -21 292 1 21 0 0 0 chr17 446875 446896 -89057657 + AT_rich Low_complexity Low_complexity 1 21 0 1171 233 129 20 chr17 446901 447249 -89057304 - L1ME3A LINE L1 -10 6160 5775 918 227 21 5 chr17 447258 447452 -89057101 - MER58A DNA MER1_type 0 224 28 1838 137 10 3 chr17 447811 448117 -89056436 - AluSx SINE Alu -4 308 1 1603 166 7 0 chr17 448270 448541 -89056012 - AluJo SINE Alu 0 312 40 1897 149 0 0 chr17 448552 448840 -89055713 - AluSx SINE Alu -12 300 13 1000 128 12 6 chr17 450048 450212 -89054341 + AluSg/x SINE Alu 137 301 -9 1790 148 3 10 chr17 451152 451450 -89053103 + AluJb SINE Alu 1 296 -16 214 356 53 53 chr17 451485 451693 -89052860 + L2 LINE L2 2845 3052 -220 318 244 61 0 chr17 451715 451797 -89052756 - MIR3 SINE MIR -8 200 114 376 189 4 7 chr17 451999 452235 -89052318 + AluJo SINE Alu 1 299 -3 1342 172 29 44 chr17 453281 453554 -89050999 - AluJo SINE Alu -32 280 12 1461 145 4 0 chr17 453565 453792 -89050761 - MER44D DNA MER2_type -1 604 322 2112 113 7 0 chr17 453849 454151 -89050402 - AluSg SINE Alu -6 304 1 1095 53 0 0 chr17 454152 454284 -89050269 - AluSg SINE Alu -178 132 1 1460 198 12 1 chr17 455004 455493 -89049060 - MER44D DNA MER2_type -1 604 1 1412 258 112 38 chr17 455512 456019 -89048534 - L3 LINE CR1 -23 1554 1010 405 252 72 9 chr17 456268 456379 -89048174 - L3 LINE CR1 -553 1024 907 806 291 84 7 chr17 456379 456664 -89047889 - MER102b DNA MER1_type 0 341 35 527 316 163 14 chr17 456670 456952 -89047601 - L3 LINE CR1 -664 913 590 189 320 90 58 chr17 457017 457173 -89047380 + MIR SINE MIR 82 242 -20 2139 126 0 0 chr17 457231 457540 -89047013 + AluSx SINE Alu 1 309 -3 741 223 66 18 chr17 457540 457696 -89046857 + AluJo SINE Alu 134 300 -12 2014 124 101 20 chr17 458516 458863 -89045690 - THE1C LTR MaLR 0 375 1 406 207 256 0 chr17 459107 459228 -89045325 + MIR SINE MIR 49 200 -62 1662 162 13 26 chr17 459250 459413 -89045140 - AluJo SINE Alu -13 299 135 2064 105 3 3 chr17 459413 459709 -89044844 - AluSc SINE Alu -13 296 1 2074 109 0 3 chr17 459709 460001 -89044552 - AluSx SINE Alu -20 292 1 1662 162 13 26 chr17 460001 460139 -89044414 - AluJo SINE Alu -175 137 1 1652 191 7 10 chr17 460663 460967 -89043586 - AluJo SINE Alu -9 303 1 1268 191 29 51 chr17 460969 461283 -89043270 - AluJo SINE Alu -2 310 4 1952 164 11 35 chr17 461306 461678 -89042875 - MER47A DNA MER2_type 0 366 4 2082 106 3 7 chr17 461996 462299 -89042254 - AluSq SINE Alu -11 302 1 1583 240 108 14 chr17 462324 462824 -89041729 - L1M4 LINE L1 -1526 4620 4074 275 102 61 0 chr17 462825 462874 -89041679 - L1MCc LINE L1 -4151 2971 2920 333 255 59 93 chr17 462884 463088 -89041465 - L1MCc LINE L1 -4329 2793 2597 33 0 0 0 chr17 463096 463129 -89041424 + AT_rich Low_complexity Low_complexity 1 33 0 776 181 0 8 chr17 463154 463287 -89041266 - FLAM_A SINE Alu -1 132 1 285 294 46 0 chr17 463319 463428 -89041125 - L1MA9 LINE L1 -38 6274 6161 * 749 251 44 36 chr17 463423 463698 -89040855 - L1MCc LINE L1 -4614 2508 2232 * 1106 226 46 77 chr17 463693 464323 -89040230 - L1MCc LINE L1 -4887 1536 1278 1023 261 71 25 chr17 464321 464715 -89039838 - L1MCc LINE L1 -5995 428 17 * 712 167 7 211 chr17 464715 465009 -89039544 + Charlie1 DNA MER1_type 2187 2420 -341 1474 219 40 26 chr17 465012 465359 -89039194 + MLT1A1 LTR MaLR 12 363 -2 1645 181 35 84 chr17 465362 465569 -89038984 + Charlie1 DNA MER1_type 2329 2544 -217 1986 120 0 0 chr17 465569 465853 -89038700 + AluSg SINE Alu 1 284 -26 188 35 35 0 chr17 465857 465886 -89038667 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1645 181 35 84 chr17 465886 466127 -89038426 + Charlie1 DNA MER1_type 2547 2760 -1 418 281 35 9 chr17 466209 466323 -89038230 - L2 LINE L2 0 3313 3197 233 270 120 41 chr17 466411 466678 -89037875 - L1M4 LINE L1 -2202 3944 3657 2188 110 0 0 chr17 466691 466992 -89037561 - AluSx SINE Alu -11 301 1 1180 62 0 7 chr17 466992 467138 -89037415 - AluSq/x SINE Alu -168 145 1 2189 92 0 3 chr17 467465 467771 -89036782 - AluSc SINE Alu -4 305 1 763 131 0 0 chr17 468098 468205 -89036348 - AluSq/x SINE Alu -203 109 3 906 191 153 0 chr17 468215 468477 -89036076 - L1M4 LINE L1 -869 5277 4976 468 0 0 0 chr17 468661 468713 -89035840 + (TG)n Simple_repeat Simple_repeat 1 52 0 2169 39 11 18 chr17 468713 468993 -89035560 - AluY SINE Alu -33 278 1 190 89 67 22 chr17 469028 469073 -89035480 + CT-rich Low_complexity Low_complexity 4 50 0 2187 185 102 20 chr17 469333 469831 -89034722 + L1MB7 LINE L1 5627 6165 -19 1528 210 13 3 chr17 469928 470237 -89034316 + AluJo SINE Alu 1 312 0 405 0 0 0 chr17 471687 471732 -89032821 + (GA)n Simple_repeat Simple_repeat 2 46 0 423 0 0 0 chr17 471755 471802 -89032751 + (TG)n Simple_repeat Simple_repeat 2 48 0 1872 104 59 0 chr17 471935 472205 -89032348 + AluSc SINE Alu 11 296 -13 305 305 104 19 chr17 472346 472500 -89032053 - MIR SINE MIR -79 183 17 345 130 40 30 chr17 472532 472632 -89031921 + CT-rich Low_complexity Low_complexity 2 102 0 1833 147 16 0 chr17 472661 472967 -89031586 - AluSx SINE Alu -1 311 1 2286 96 0 0 chr17 473986 474289 -89030264 - AluSc SINE Alu -6 303 1 1771 157 10 10 chr17 474292 474591 -89029962 - AluSx SINE Alu -9 303 5 253 188 125 0 chr17 475626 475690 -89028863 + MER94 DNA DNA 4 75 -59 2215 116 6 26 chr17 475836 476180 -89028373 - MER1B DNA MER1_type 0 337 1 243 259 184 23 chr17 476435 476609 -89027944 + L2 LINE L2 1597 1798 -1516 867 198 8 118 chr17 476611 476848 -89027705 - MER58A DNA MER1_type -3 221 11 1068 282 72 32 chr17 476872 476976 -89027577 + L2 LINE L2 1839 1937 -1377 1719 110 0 4 chr17 476976 477213 -89027340 - AluSg SINE Alu -19 291 56 2182 108 0 0 chr17 477218 477524 -89027029 - AluSq SINE Alu -7 306 1 1068 282 72 32 chr17 477524 477884 -89026669 + L2 LINE L2 1940 2328 -986 2152 98 3 0 chr17 477888 478183 -89026370 - AluSq SINE Alu -17 296 1 1157 225 32 0 chr17 478183 478432 -89026121 - MSTD-int LTR MaLR -1477 258 2 1166 191 82 59 chr17 478432 478886 -89025667 - MSTD LTR MaLR -2 426 1 789 311 82 58 chr17 478953 479528 -89025025 + L2 LINE L2 2370 2983 -330 2306 75 0 0 chr17 479528 479822 -89024731 + AluY SINE Alu 1 294 -17 789 311 82 58 chr17 479822 480161 -89024392 + L2 LINE L2 2983 3312 -1 1749 151 18 0 chr17 480687 480971 -89023582 - AluJb SINE Alu -13 299 11 306 0 0 0 chr17 480980 481014 -89023539 + (CCTG)n Simple_repeat Simple_repeat 2 35 0 934 129 24 0 chr17 481016 481186 -89023367 + CT-rich Low_complexity Low_complexity 4 177 0 186 43 0 0 chr17 481187 481210 -89023343 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2106 91 0 0 chr17 481210 481486 -89023067 - AluY SINE Alu -35 276 1 216 0 0 0 chr17 482325 482349 -89022204 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2306 70 0 7 chr17 482356 482656 -89021897 - AluSc SINE Alu -11 298 1 410 257 114 0 chr17 483033 483138 -89021415 + MIR SINE MIR 110 226 -36 675 227 28 90 chr17 483531 483781 -89020772 - MIR SINE MIR -14 248 23 1941 110 11 0 chr17 484315 484624 -89019929 + AluSx SINE Alu 1 312 0 23 0 0 0 chr17 484777 484800 -89019753 + AT_rich Low_complexity Low_complexity 1 23 0 225 0 0 0 chr17 487116 487141 -89017412 + (CA)n Simple_repeat Simple_repeat 2 26 0 2463 48 3 0 chr17 489089 489399 -89015154 - AluY SINE Alu 0 311 1 1933 119 0 0 chr17 489644 489938 -89014615 - AluY SINE Alu -13 298 5 245 116 23 0 chr17 489938 489981 -89014572 - Alu SINE Alu -259 44 1 1871 197 217 12 chr17 491067 491560 -89012993 - MLT1G1 LTR MaLR 0 595 2 2095 97 28 0 chr17 491560 491849 -89012704 + AluSx SINE Alu 1 297 -15 1132 180 0 9 chr17 492264 492475 -89012078 - AluJo SINE Alu -30 282 74 344 268 212 45 chr17 492976 493337 -89011216 - L1ME LINE L1 -348 5822 5394 1807 159 0 7 chr17 493341 493642 -89010911 - AluJo SINE Alu -13 299 1 456 282 33 74 chr17 493658 494048 -89010505 - L1MEd LINE L1 -1173 1317 895 2123 113 0 10 chr17 494666 494976 -89009577 - AluSx SINE Alu -5 307 1 1129 184 0 10 chr17 495499 495706 -89008847 - AluJo SINE Alu -107 205 1 456 282 33 74 chr17 495722 496112 -89008441 - L1MEd LINE L1 -1173 1317 895 1996 125 0 13 chr17 497508 497819 -89006734 - AluSx SINE Alu -5 307 1 319 341 77 18 chr17 498630 498800 -89005753 - L2 LINE L2 -1 3312 3133 923 223 23 11 chr17 501517 501782 -89002771 + L1M4 LINE L1 4986 5253 -893 8802 26 0 1 chr17 552020 553039 -88951514 + L1P LINE L1 3793 4810 -1336 287 247 65 0 chr17 553052 553129 -88951424 - HsTC2 DNA Tc2 -546 1352 1271 712 258 117 11 chr17 553136 553419 -88951134 - L1MC4 LINE L1 0 8042 7730 25 83 0 0 chr17 553657 553717 -88950836 + AT_rich Low_complexity Low_complexity 1 60 0 25 0 0 0 chr17 554283 554308 -88950245 + AT_rich Low_complexity Low_complexity 1 25 0 776 208 0 91 chr17 554383 554410 -88950143 + L1MA10 LINE L1 6124 6152 -182 2009 114 3 7 chr17 554410 554721 -88949832 - AluSg SINE Alu 0 310 2 776 208 0 91 chr17 554721 554924 -88949629 + L1MA10 LINE L1 6152 6333 -1 227 195 0 0 chr17 555260 555301 -88949252 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 1864 163 0 0 chr17 555395 555695 -88948858 + AluSx SINE Alu 1 300 -12 286 267 61 30 chr17 555889 556020 -88948533 + MIR SINE MIR 77 211 -51 2576 183 170 58 chr17 556851 557110 -88947443 - L1MC4a LINE L1 -1 7807 7578 1470 169 55 0 chr17 557110 557383 -88947170 - AluJo SINE Alu -24 288 1 2576 183 170 58 chr17 557383 557926 -88946627 - L1MC4a LINE L1 -230 7578 6940 1491 172 39 26 chr17 557932 558240 -88946313 + AluJb SINE Alu 1 312 0 1757 172 7 0 chr17 567972 568275 -88936278 - AluJb SINE Alu -7 305 1 200 241 148 111 chr17 568952 569168 -88935385 + MIR SINE MIR 2 225 -37 10368 29 8 106 chr17 569715 571247 -88933306 - SVA Other Other -3 1383 2 321 26 0 0 chr17 571251 571289 -88933264 + (GGGAGA)n Simple_repeat Simple_repeat 6 43 0 467 203 0 3 chr17 571299 571394 -88933159 - L1MC4 LINE L1 -2 8040 7889 221 190 52 0 chr17 571432 571490 -88933063 + T-rich Low_complexity Low_complexity 5 65 0 291 93 0 0 chr17 571490 571533 -88933020 + (TCCCC)n Simple_repeat Simple_repeat 1 43 0 1133 160 37 0 chr17 571533 571721 -88932832 - AluJb SINE Alu -117 195 1 753 165 49 18 chr17 571726 571890 -88932663 - L1MC4 LINE L1 -142 7900 7732 * 2693 166 80 219 chr17 571889 572359 -88932194 - L1MC4 LINE L1 -234 7808 7274 2116 108 3 19 chr17 572359 572673 -88931880 - AluSq SINE Alu -4 309 1 2693 166 80 219 chr17 572673 572831 -88931722 - L1MC4 LINE L1 -768 7274 7096 1935 114 59 7 chr17 572831 573121 -88931432 - AluSx SINE Alu -7 305 1 2693 166 80 219 chr17 573121 574057 -88930496 - L1MC4 LINE L1 -946 7096 6461 1728 157 33 17 chr17 574211 574511 -88930042 + AluJb SINE Alu 1 305 -7 267 31 0 0 chr17 574837 574869 -88929684 + (TCCCC)n Simple_repeat Simple_repeat 5 36 0 1104 194 0 9 chr17 574871 575087 -88929466 - AluJo SINE Alu -32 280 67 1103 151 0 0 chr17 575091 575257 -88929296 + AluJb SINE Alu 135 300 -12 2113 98 3 19 chr17 575713 576028 -88928525 + AluSg SINE Alu 1 310 0 393 264 42 35 chr17 576375 576519 -88928034 + MER117 DNA MER1_type 19 163 -34 2714 10 0 3 chr17 576527 576836 -88927717 - AluYa5 SINE Alu -3 308 1 2285 96 0 3 chr17 577324 577638 -88926915 - AluSp SINE Alu 0 313 1 1887 104 3 68 chr17 578016 578196 -88926357 - AluSx SINE Alu -7 305 154 2178 89 13 13 chr17 578196 578499 -88926054 - AluY SINE Alu -8 303 1 1887 104 3 68 chr17 578499 578644 -88925909 - AluSx SINE Alu -158 154 1 1112 82 0 0 chr17 578644 578790 -88925763 - AluSq/x SINE Alu -166 146 1 694 309 35 43 chr17 578984 579160 -88925393 + MIR SINE MIR 8 183 -79 2089 111 6 16 chr17 579160 579475 -88925078 + AluSx SINE Alu 1 312 0 694 309 35 43 chr17 579475 579554 -88924999 + MIR SINE MIR 183 261 -1 205 227 303 0 chr17 579627 579693 -88924860 + MIR SINE MIR 50 135 -73 1642 128 0 8 chr17 580864 581137 -88923416 + AluSx SINE Alu 39 309 0 357 298 66 50 chr17 581142 581323 -88923230 - L1ME4a LINE L1 -92 6029 5846 399 302 114 0 chr17 581323 581472 -88923081 - LTR33 LTR ERVL 0 521 356 242 267 44 0 chr17 583468 583558 -88920995 - L1ME4a LINE L1 -73 6048 5955 1852 119 0 41 chr17 583739 584054 -88920499 - AluSg SINE Alu 0 303 1 2037 103 0 3 chr17 584109 584399 -88920154 - AluY SINE Alu -15 296 8 1364 92 0 0 chr17 584399 584572 -88919981 - AluY SINE Alu -138 173 1 1951 158 0 0 chr17 584598 584902 -88919651 + AluJo SINE Alu 1 304 -8 885 208 35 10 chr17 585066 585268 -88919285 + L1MC5 LINE L1 6660 6866 -1095 960 223 83 55 chr17 585277 585604 -88918949 + MLT1C LTR MaLR 6 341 -126 1088 94 0 13 chr17 585609 585758 -88918795 + AluSq/x SINE Alu 5 151 -161 512 275 69 72 chr17 585788 586093 -88918460 + L2 LINE L2 3009 3312 -1 631 174 144 0 chr17 586095 586227 -88918326 - MSTD LTR MaLR -243 153 3 659 152 67 42 chr17 586257 586422 -88918131 - L1MC3 LINE L1 0 7785 7617 1373 159 41 44 chr17 586466 586761 -88917792 - AluJo SINE Alu -18 294 1 951 222 40 48 chr17 586772 587123 -88917430 - L1MC5 LINE L1 -453 7508 7161 1393 82 0 16 chr17 587123 587317 -88917236 + AluSx SINE Alu 1 191 -121 341 49 0 0 chr17 587319 587360 -88917193 + AluSg SINE Alu 59 99 -201 500 290 98 59 chr17 587446 587701 -88916852 - L2 LINE L2 -348 2966 2702 308 273 45 18 chr17 587726 587836 -88916717 + L2 LINE L2 3201 3313 0 332 248 149 12 chr17 587841 588002 -88916551 - L1ME4a LINE L1 -406 5715 5533 1942 100 3 65 chr17 588037 588346 -88916207 + AluSq SINE Alu 3 292 -21 362 282 32 16 chr17 588474 588598 -88915955 + L2 LINE L2 3173 3298 -15 479 222 296 15 chr17 588738 588888 -88915665 + MIR SINE MIR 3 110 -152 2129 98 24 0 chr17 588888 589183 -88915370 + AluSq SINE Alu 1 302 -11 479 222 296 15 chr17 589183 589235 -88915318 + MIR SINE MIR 110 262 0 1565 187 3 3 chr17 591173 591473 -88913080 - AluJo SINE Alu -12 300 1 1168 192 18 39 chr17 592172 592401 -88912152 + MER58A DNA MER1_type 1 224 0 341 292 119 40 chr17 592477 592703 -88911850 + MIR SINE MIR 13 256 -6 199 336 65 42 chr17 594557 594774 -88909779 + L2 LINE L2 2807 3028 -244 4120 191 65 37 chr17 594792 594842 -88909711 - L1MB7 LINE L1 -21 6163 6116 1467 170 83 4 chr17 594842 595119 -88909434 + AluSx SINE Alu 1 299 -13 4120 191 65 37 chr17 595119 595581 -88908972 - L1MB7 LINE L1 -68 6116 5668 2308 85 0 7 chr17 595581 595887 -88908666 + AluSx SINE Alu 1 304 -8 4120 191 65 37 chr17 595887 596381 -88908172 - L1MB7 LINE L1 -516 5668 5189 423 0 0 0 chr17 596381 596428 -88908125 + (TG)n Simple_repeat Simple_repeat 1 47 0 4120 191 65 37 chr17 596428 596881 -88907672 - L1MB7 LINE L1 -995 5189 4660 180 336 126 17 chr17 596947 597066 -88907487 + L2 LINE L2 3098 3229 -43 1639 169 0 4 chr17 597688 597960 -88906593 - AluJo SINE Alu -41 271 1 357 275 181 7 chr17 597999 598148 -88906405 - MIR SINE MIR -1 261 87 491 198 0 0 chr17 598152 598233 -88906320 + AluJb SINE Alu 168 248 -64 227 240 0 0 chr17 598287 598337 -88906216 - MIR SINE MIR -122 140 91 312 165 0 26 chr17 598347 598412 -88906141 - Alu SINE Alu -250 53 1 875 91 0 57 chr17 598699 598943 -88905610 + (TCCC)n Simple_repeat Simple_repeat 1 230 0 307 77 0 0 chr17 598943 598982 -88905571 + (TTCC)n Simple_repeat Simple_repeat 2 40 0 209 333 33 0 chr17 598988 599048 -88905505 - MIR SINE MIR -110 98 37 2113 114 10 3 chr17 599764 600062 -88904491 - AluSx SINE Alu -12 300 1 509 301 94 18 chr17 600198 600436 -88904117 - MIR SINE MIR 0 262 7 210 290 67 104 chr17 600446 600639 -88903914 + MIR SINE MIR 67 252 -10 186 250 0 0 chr17 600756 600792 -88903761 + L2 LINE L2 3262 3297 -16 194 289 0 0 chr17 600796 600841 -88903712 + L2 LINE L2 3262 3306 -7 223 244 0 0 chr17 601307 601352 -88903201 + L2 LINE L2 3262 3306 -7 1894 138 12 66 chr17 602253 602572 -88901981 + AluJo SINE Alu 1 302 -10 223 328 74 33 chr17 602843 602965 -88901588 + MIR SINE MIR 77 203 -59 690 162 0 0 chr17 603084 603195 -88901358 - AluJb SINE Alu -55 257 147 305 240 221 0 chr17 604009 604113 -88900440 + MIR3 SINE MIR 78 204 -4 354 258 164 25 chr17 604924 605083 -88899470 - L1MC5 LINE L1 -37 7924 7744 1140 199 83 15 chr17 605768 606034 -88898519 - L1MC1 LINE L1 -1 6332 6049 1978 167 0 0 chr17 607823 608122 -88896431 - AluJo SINE Alu -13 299 1 2330 105 0 0 chr17 608618 608914 -88895639 + AluSx SINE Alu 1 296 -16 198 387 108 35 chr17 608921 609345 -88895208 - L2 LINE L2 -4 3268 2814 872 189 44 0 chr17 609349 609508 -88895045 + AluJo SINE Alu 1 166 -146 244 283 168 0 chr17 610078 610191 -88894362 - L2 LINE L2 0 3313 3182 1986 117 53 17 chr17 610199 610499 -88894054 + AluSx SINE Alu 1 311 -1 2485 72 13 3 chr17 610510 610815 -88893738 + AluSq SINE Alu 1 308 -5 1274 102 17 11 chr17 610815 610991 -88893562 + AluSg/x SINE Alu 134 310 -2 1184 194 53 30 chr17 610989 611252 -88893301 + AluJb SINE Alu 27 295 -17 * 1894 237 43 124 chr17 612058 612305 -88892248 + L1MB7 LINE L1 4052 4317 -1829 2149 101 13 44 chr17 612305 612623 -88891930 + AluSg SINE Alu 1 308 -2 1894 237 43 124 chr17 612623 612720 -88891833 + L1MB7 LINE L1 4317 4420 -1726 1243 152 108 50 chr17 612720 612997 -88891556 - AluJo SINE Alu -19 293 1 1894 237 43 124 chr17 612997 613176 -88891377 + L1MB7 LINE L1 4420 4612 -1534 244 191 0 0 chr17 613176 613218 -88891335 + MER57A LTR ERV1 295 336 -67 1894 237 43 124 chr17 613218 613334 -88891219 + L1MB7 LINE L1 4612 4736 -1410 318 26 0 0 chr17 613334 613373 -88891180 + (TG)n Simple_repeat Simple_repeat 1 39 0 1894 237 43 124 chr17 613373 613711 -88890842 + L1MB7 LINE L1 4736 4966 -1180 3583 139 42 6 chr17 613711 613860 -88890693 + L1MB7 LINE L1 5504 5646 -538 2292 114 3 13 chr17 613860 614175 -88890378 + AluSx SINE Alu 1 312 0 3583 139 42 6 chr17 614175 614664 -88889889 + L1MB7 LINE L1 5646 6165 -19 1894 237 43 124 chr17 614664 614830 -88889723 + L1MB7 LINE L1 4966 5144 -1002 1891 163 11 3 chr17 614846 615129 -88889424 + AluJo SINE Alu 1 285 -27 1046 208 42 17 chr17 615139 615375 -88889178 + L1ME3 LINE L1 5472 5713 -449 252 349 84 19 chr17 615490 615705 -88888848 + L1ME3 LINE L1 5928 6156 -6 2297 118 3 0 chr17 616737 617042 -88887511 - AluSx SINE Alu -6 306 1 1819 186 0 16 chr17 617044 617351 -88887202 - AluJo SINE Alu -10 302 1 635 282 48 97 chr17 617416 618262 -88886291 - L1ME3A LINE L1 -213 5951 5268 2048 81 102 18 chr17 618453 618737 -88885816 - AluSx SINE Alu 0 312 5 215 296 56 28 chr17 619829 619937 -88884616 + MIR SINE MIR 91 201 -61 309 336 73 0 chr17 620083 620193 -88884360 + L1ME4a LINE L1 5393 5510 -611 267 188 0 0 chr17 620298 620346 -88884207 - FAM SINE Alu -12 167 120 276 257 122 68 chr17 620411 620491 -88884062 + L1ME4a LINE L1 5869 5943 -178 1850 156 0 14 chr17 620491 620786 -88883767 - AluJb SINE Alu -21 291 1 276 257 122 68 chr17 620786 620942 -88883611 + L1ME4a LINE L1 5943 6118 -3 228 344 27 0 chr17 622460 622580 -88881973 + MER5A DNA MER1_type 47 173 -5 207 273 0 57 chr17 623199 623287 -88881266 + CT-rich Low_complexity Low_complexity 1 83 0 1388 70 12 0 chr17 623964 624135 -88880418 - AluSg/x SINE Alu -3 307 135 1281 168 48 0 chr17 624688 624897 -88879656 + AluJo SINE Alu 2 220 -92 2167 111 0 3 chr17 624937 625225 -88879328 + AluSx SINE Alu 1 287 -25 329 287 66 12 chr17 626035 626096 -88878457 - MER5B DNA MER1_type -2 176 120 2148 103 14 3 chr17 626096 626388 -88878165 + AluSc SINE Alu 1 295 -14 329 287 66 12 chr17 626388 626493 -88878060 - MER5B DNA MER1_type -58 120 1 2060 97 10 33 chr17 626654 626953 -88877600 + AluSx SINE Alu 1 292 -20 823 147 0 16 chr17 627098 627227 -88877326 + AluJo/FLAM SINE Alu 1 127 -185 2184 114 10 0 chr17 627227 627524 -88877029 + AluSx SINE Alu 1 300 -12 23 0 0 0 chr17 629315 629338 -88875215 + AT_rich Low_complexity Low_complexity 1 23 0 209 193 0 18 chr17 630954 631011 -88873542 + CT-rich Low_complexity Low_complexity 2 57 0 237 254 15 0 chr17 632171 632238 -88872315 - MIR SINE MIR -141 121 54 1192 179 0 9 chr17 634515 634733 -88869820 - MER46A DNA MER2_type 0 236 21 193 250 50 0 chr17 635717 635777 -88868776 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 635977 636037 -88868516 + L2 LINE L2 1846 1908 -1406 183 267 50 0 chr17 636172 636232 -88868321 + L2 LINE L2 1846 1908 -1406 193 250 50 0 chr17 636367 636427 -88868126 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 636497 636557 -88867996 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 636627 636687 -88867866 + L2 LINE L2 1846 1908 -1406 183 267 50 0 chr17 636822 636882 -88867671 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 636952 637012 -88867541 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 637147 637207 -88867346 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 637667 637727 -88866826 + L2 LINE L2 1846 1908 -1406 1059 109 24 6 chr17 638374 638539 -88866014 + Tigger5 DNA MER2_type 2156 2323 0 843 136 0 0 chr17 639118 639291 -88865262 - FLAM_C SINE Alu 0 174 2 2203 107 3 7 chr17 639941 640240 -88864313 + AluSg SINE Alu 1 298 -12 1050 130 62 0 chr17 640240 640402 -88864151 + AluSg/x SINE Alu 134 305 -7 365 225 85 70 chr17 640541 640670 -88863883 + MER8 DNA MER2_type 49 179 -60 281 297 0 0 chr17 640645 640709 -88863844 + MER2 DNA MER2_type 282 345 0 * 2294 86 3 13 chr17 640797 641099 -88863454 - AluSx SINE Alu -13 299 1 1279 226 35 41 chr17 641118 641485 -88863068 + MLT1A1 LTR MaLR 1 365 0 1928 139 35 3 chr17 641646 641933 -88862620 + AluJb SINE Alu 1 296 -16 2461 82 0 0 chr17 641972 642275 -88862278 + AluY SINE Alu 1 303 -8 2069 128 3 0 chr17 643427 643709 -88860844 + AluSx SINE Alu 1 283 -29 180 0 0 0 chr17 643709 643729 -88860824 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 2134 118 17 0 chr17 643738 644027 -88860526 + AluSq SINE Alu 1 294 -19 189 132 38 19 chr17 644185 644238 -88860315 + CT-rich Low_complexity Low_complexity 1 54 0 * 210 118 0 0 chr17 644231 644265 -88860288 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 1804 167 17 0 chr17 644265 644565 -88859988 - AluJb SINE Alu -7 305 1 1071 83 0 0 chr17 644567 644700 -88859853 - AluSq/x SINE Alu -179 133 1 2240 113 0 28 chr17 646166 646484 -88858069 + AluSq SINE Alu 5 313 0 721 185 52 0 chr17 646785 646920 -88857633 - FRAM SINE Alu -25 151 10 255 167 0 50 chr17 646945 647005 -88857548 - AluJ SINE Alu -116 186 130 935 124 0 28 chr17 647023 647168 -88857385 + FLAM_C SINE Alu 1 141 -2 21 36 0 0 chr17 647190 647218 -88857335 + AT_rich Low_complexity Low_complexity 1 28 0 1037 161 0 22 chr17 647231 647411 -88857142 + FRAM SINE Alu 1 176 0 812 158 0 0 chr17 647412 647532 -88857021 - AluJ SINE Alu -192 120 1 2062 66 0 0 chr17 648503 648745 -88855808 - AluSq SINE Alu -71 242 1 1876 124 9 73 chr17 648985 649300 -88855253 + AluSx SINE Alu 1 295 -17 482 88 0 0 chr17 649303 649371 -88855182 + Alu SINE Alu 11 78 -232 324 200 10 60 chr17 849372 849472 -88655081 + L1MC4a LINE L1 7328 7422 -386 * 1174 219 45 6 chr17 849445 849779 -88654774 + L1MD3 LINE L1 7648 7994 -1 2640 13 0 7 chr17 849971 850273 -88654280 + AluYb8 SINE Alu 1 300 -18 1486 152 7 65 chr17 850522 850812 -88653741 - AluJo SINE Alu -39 273 1 2350 79 10 0 chr17 850822 851126 -88653427 - AluSx SINE Alu -5 307 1 1954 120 3 17 chr17 851439 851606 -88652947 - AluJb SINE Alu -11 301 138 2162 105 3 7 chr17 851606 851911 -88652642 - AluY SINE Alu -7 304 1 1954 120 3 17 chr17 851911 852035 -88652518 - AluJb SINE Alu -174 138 14 2317 74 0 0 chr17 852285 852582 -88651971 + AluY SINE Alu 1 297 -14 2264 71 19 13 chr17 852742 852875 -88651678 + AluSx SINE Alu 1 132 -180 2071 110 3 16 chr17 852875 853183 -88651370 + AluSp SINE Alu 1 304 -9 2264 71 19 13 chr17 853183 853359 -88651194 + AluSx SINE Alu 132 312 0 2384 57 0 0 chr17 853606 853904 -88650649 + AluY SINE Alu 1 298 -13 1835 92 0 12 chr17 856181 856431 -88648122 - AluSq SINE Alu -66 247 1 711 235 9 68 chr17 856456 856677 -88647876 + L1ME3 LINE L1 5923 6130 -32 1854 173 3 3 chr17 856693 857005 -88647548 - AluJo SINE Alu 0 312 1 2840 98 176 12 chr17 857042 857465 -88647088 - LTR61 LTR ERV1 0 595 73 2499 58 0 3 chr17 857465 857777 -88646776 - AluY SINE Alu 0 311 1 2840 98 176 12 chr17 857777 857863 -88646690 - LTR61 LTR ERV1 -522 73 2 384 278 68 8 chr17 857864 857997 -88646556 - MIR SINE MIR -104 158 18 266 353 32 19 chr17 858473 858629 -88645924 - L2 LINE L2 -905 2409 2252 2124 96 0 0 chr17 858799 859080 -88645473 - AluSx SINE Alu -3 309 29 411 86 0 0 chr17 859184 859242 -88645311 + AluSp/q SINE Alu 242 299 -14 288 342 108 4 chr17 859243 859503 -88645050 + L1ME LINE L1 5551 5837 -284 985 82 8 0 chr17 859982 860116 -88644437 + AluSq/x SINE Alu 1 135 -178 2070 113 10 0 chr17 860116 860408 -88644145 + AluSx SINE Alu 1 295 -17 32 0 0 0 chr17 860408 860440 -88644113 + AT_rich Low_complexity Low_complexity 1 32 0 290 332 56 78 chr17 860733 861001 -88643552 + MIR SINE MIR 1 262 0 440 75 0 0 chr17 861347 861414 -88643139 - AluSp/q SINE Alu 0 313 247 2145 119 0 0 chr17 861577 861879 -88642674 + AluSx SINE Alu 1 302 -10 257 135 313 10 chr17 861879 861975 -88642578 - L1 LINE L1 -1415 4731 4607 4343 177 74 63 chr17 861976 862189 -88642364 - Tigger1 DNA MER2_type -1238 1180 971 2177 105 0 0 chr17 862189 862511 -88642042 - AluSx SINE Alu 0 322 1 4343 177 74 63 chr17 862511 863032 -88641521 - Tigger1 DNA MER2_type -1447 971 425 2072 98 21 0 chr17 863032 863319 -88641234 - AluSg SINE Alu -15 295 3 4343 177 74 63 chr17 863319 863749 -88640804 - Tigger1 DNA MER2_type -1993 425 1 2141 58 0 0 chr17 865145 865405 -88639148 + AluSx SINE Alu 37 296 -16 1422 140 81 4 chr17 865661 865896 -88638657 + AluJo SINE Alu 14 266 -46 2146 111 0 10 chr17 866072 866370 -88638183 + AluSx SINE Alu 1 295 -17 898 187 0 0 chr17 867119 867133 -88637420 - AluSq/x SINE Alu -163 150 137 1332 365 0 31 chr17 867133 867454 -88637099 - AluSx SINE Alu -1 311 1 898 187 0 0 chr17 867454 867589 -88636964 - AluSq/x SINE Alu -175 138 1 204 308 34 127 chr17 867629 867866 -88636687 - L2 LINE L2 -77 3195 2981 4944 54 24 1 chr17 871132 871801 -88632752 - LTR13 LTR ERVK -323 684 1 315 0 0 0 chr17 871809 871844 -88632709 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2118 93 0 20 chr17 872593 872895 -88631658 - AluSg SINE Alu -14 296 1 202 280 0 0 chr17 873331 873381 -88631172 + GA-rich Low_complexity Low_complexity 3 52 0 408 208 26 32 chr17 873641 873795 -88630758 + (CGGGG)n Simple_repeat Simple_repeat 3 155 0 195 152 0 0 chr17 874101 874147 -88630406 + G-rich Low_complexity Low_complexity 6 51 0 223 230 30 40 chr17 874287 874387 -88630166 + (CCCG)n Simple_repeat Simple_repeat 2 100 0 587 304 134 0 chr17 874487 874704 -88629849 - MIR SINE MIR -15 247 2 288 0 0 0 chr17 874803 874835 -88629718 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1789 152 11 0 chr17 874837 875113 -88629440 - AluJb SINE Alu -33 279 1 2371 73 3 0 chr17 876754 877054 -88627499 - AluSp SINE Alu -11 302 2 207 0 0 0 chr17 878825 878848 -88625705 + (TCCCC)n Simple_repeat Simple_repeat 1 23 0 373 301 0 0 chr17 879093 879226 -88625327 + G-rich Low_complexity Low_complexity 1 133 0 897 163 0 0 chr17 879381 879516 -88625037 + AluJo SINE Alu 1 135 -177 1627 200 0 0 chr17 879516 879806 -88624747 + AluJb SINE Alu 1 290 -22 2128 110 3 0 chr17 880057 880349 -88624204 - AluSx SINE Alu -19 293 1 2071 116 10 0 chr17 880352 880644 -88623909 - AluSq SINE Alu -18 295 1 267 31 0 0 chr17 881187 881219 -88623334 + (TG)n Simple_repeat Simple_repeat 2 33 0 1552 182 7 20 chr17 881219 881376 -88623177 - AluJo SINE Alu -20 292 139 2045 78 32 0 chr17 881376 881657 -88622896 - AluSg SINE Alu -8 302 13 1552 182 7 20 chr17 881657 881795 -88622758 - AluJo SINE Alu -173 139 1 2135 109 0 0 chr17 882514 882808 -88621745 - AluSg SINE Alu -16 294 1 526 321 59 45 chr17 883281 883445 -88621108 + MIR SINE MIR 39 208 -54 2229 91 0 10 chr17 883445 883753 -88620800 + AluY SINE Alu 1 305 -6 526 321 59 45 chr17 883753 883809 -88620744 + MIR SINE MIR 208 262 0 228 333 42 0 chr17 884072 884168 -88620385 - MIR3 SINE MIR 0 208 109 1569 72 5 27 chr17 884229 884450 -88620103 - AluY SINE Alu -2 309 94 2019 147 0 0 chr17 885409 885708 -88618845 + AluJb SINE Alu 1 299 -13 1749 137 53 14 chr17 885709 886244 -88618309 + Tigger1 DNA MER2_type 1582 2208 -210 2142 109 3 0 chr17 886244 886547 -88618006 - AluY SINE Alu -7 304 1 2064 131 3 7 chr17 886548 886854 -88617699 - AluSx SINE Alu -7 305 1 248 217 17 0 chr17 886854 886914 -88617639 + Tigger1 DNA MER2_type 2356 2416 -2 6074 165 21 3 chr17 886915 888034 -88616519 - ERVL LTR ERVL -327 5437 4298 6127 195 17 12 chr17 888418 889720 -88614833 - ERVL LTR ERVL -1426 4338 3031 245 196 0 36 chr17 889723 889779 -88614774 - MLT2D LTR ERVL -360 54 1 239 114 0 0 chr17 889895 889930 -88614623 + Alu SINE Alu 1 35 -267 2213 84 0 20 chr17 890111 890410 -88614143 + AluSg SINE Alu 1 293 -17 229 325 34 34 chr17 890441 890558 -88613995 + MIR SINE MIR 28 144 -118 223 206 14 96 chr17 893367 893440 -88611113 - MIR3 SINE MIR -31 177 111 831 118 0 0 chr17 894199 894343 -88610210 + (TGGA)n Simple_repeat Simple_repeat 1 144 0 223 250 0 36 chr17 895692 895776 -88608777 + G-rich Low_complexity Low_complexity 1 81 0 682 268 41 41 chr17 897433 897676 -88606877 + MIR SINE MIR 10 252 -10 2080 135 3 0 chr17 897860 898171 -88606382 - AluSx SINE Alu 0 312 1 863 192 23 6 chr17 898240 898417 -88606136 - AluJb SINE Alu -12 300 121 271 272 39 10 chr17 898546 898649 -88605904 - L1MC5 LINE L1 -34 7927 7822 441 257 117 9 chr17 898741 898840 -88605713 - L1MC5 LINE L1 -267 7694 7607 2201 73 0 4 chr17 898840 899115 -88605438 - AluY SINE Alu -15 296 23 441 257 117 9 chr17 899115 899229 -88605324 - L1MC5 LINE L1 -354 7607 7458 410 263 47 52 chr17 899890 900103 -88604450 - L3 LINE CR1 -348 1229 1018 1316 82 26 60 chr17 900104 900180 -88604373 + MER30 DNA MER1_type 7 84 -146 2220 101 3 0 chr17 900180 900476 -88604077 + AluSp SINE Alu 1 297 -16 1316 82 26 60 chr17 900476 900631 -88603922 + MER30 DNA MER1_type 84 230 0 408 187 0 13 chr17 900672 900686 -88603867 - AluY SINE Alu -83 228 215 2176 106 7 3 chr17 900686 900988 -88603565 - AluSq SINE Alu -6 307 5 408 187 0 13 chr17 900988 901048 -88603505 - AluY SINE Alu -96 215 155 446 425 127 14 chr17 901048 901554 -88602999 - L3 LINE CR1 -830 747 185 2446 50 0 0 chr17 902732 903031 -88601522 - AluY SINE Alu -12 299 1 1758 187 3 0 chr17 903201 903506 -88601047 - AluSx SINE Alu -6 306 1 234 0 0 0 chr17 903586 903612 -88600941 + (TG)n Simple_repeat Simple_repeat 2 27 0 26 30 0 0 chr17 904250 904283 -88600270 + AT_rich Low_complexity Low_complexity 1 33 0 1038 106 0 0 chr17 904300 904441 -88600112 - AluJb SINE Alu -171 141 1 2174 119 3 0 chr17 904671 904974 -88599579 - AluSx SINE Alu -8 304 1 1697 98 38 0 chr17 905417 905652 -88598901 - AluSx SINE Alu -5 307 64 2244 85 0 0 chr17 905752 906035 -88598518 + AluSp SINE Alu 17 299 -14 284 309 86 63 chr17 907264 907439 -88597114 - MIR SINE MIR -27 235 57 230 322 75 62 chr17 907799 907945 -88596608 + MIR SINE MIR 102 249 -13 1125 73 0 0 chr17 907971 908108 -88596445 + AluSq/x SINE Alu 1 137 -176 2028 116 36 0 chr17 908108 908409 -88596144 + AluSx SINE Alu 1 312 0 222 325 12 24 chr17 908501 908584 -88595969 + L2 LINE L2 3226 3307 -6 423 0 0 0 chr17 909622 909669 -88594884 + (CA)n Simple_repeat Simple_repeat 2 48 0 297 242 0 0 chr17 909821 909887 -88594666 + MIR SINE MIR 166 231 -31 367 179 0 84 chr17 909960 910226 -88594327 + (CCA)n Simple_repeat Simple_repeat 1 243 0 461 328 50 35 chr17 910355 910696 -88593857 + MLT1I LTR MaLR 28 373 -36 2133 119 10 0 chr17 910702 911004 -88593549 - AluSx SINE Alu -7 305 1 1320 226 65 12 chr17 911472 911809 -88592744 + L1MB2 LINE L1 5667 6021 -150 975 188 0 5 chr17 911810 912002 -88592551 + MER1B DNA MER1_type 1 191 -106 435 90 0 26 chr17 912003 912081 -88592472 + MER1B DNA MER1_type 243 318 -21 437 247 110 0 chr17 912085 912231 -88592322 + L1MB3 LINE L1 6015 6176 -7 2522 44 0 13 chr17 912236 912551 -88592002 - AluY SINE Alu 0 311 1 28 48 0 0 chr17 912560 912602 -88591951 + AT_rich Low_complexity Low_complexity 1 42 0 2181 109 26 0 chr17 912759 913063 -88591490 - AluSx SINE Alu 0 312 1 779 263 69 23 chr17 913162 913379 -88591174 + MIR SINE MIR 35 261 -1 311 155 0 0 chr17 913499 913560 -88590993 - Alu SINE Alu -255 46 1 354 210 12 0 chr17 913747 913828 -88590725 + L1MB2 LINE L1 5907 5988 -183 899 216 33 9 chr17 914336 914549 -88590004 + MIR SINE MIR 2 219 -43 201 330 41 21 chr17 915054 915151 -88589402 + MIR SINE MIR 91 189 -73 325 80 0 0 chr17 915166 915216 -88589337 + AluY SINE Alu 83 132 -169 997 91 0 0 chr17 915219 915351 -88589202 + AluY SINE Alu 1 132 -179 2176 82 24 3 chr17 915354 915645 -88588908 + AluY SINE Alu 1 297 -14 2229 97 3 3 chr17 915652 915950 -88588603 + AluSq SINE Alu 1 298 -15 1798 100 89 0 chr17 916155 916424 -88588129 + AluSq SINE Alu 1 293 -20 1532 243 93 4 chr17 918724 919198 -88585355 + L1M4 LINE L1 4789 5304 -842 2198 75 41 0 chr17 919202 919494 -88585059 + AluSq SINE Alu 1 304 -9 2171 103 0 0 chr17 919929 920220 -88584333 + AluSx SINE Alu 9 299 -13 688 276 0 29 chr17 920220 920394 -88584159 - MIR SINE MIR -54 208 40 774 249 32 5 chr17 920557 920742 -88583811 - MIR SINE MIR -61 201 12 2365 90 0 0 chr17 920769 921070 -88583483 - AluSx SINE Alu -11 301 1 275 125 0 0 chr17 921830 921870 -88582683 + Alu SINE Alu 1 40 -261 2052 122 3 3 chr17 921906 922200 -88582353 + AluSx SINE Alu 1 294 -18 209 293 0 0 chr17 922337 922395 -88582158 - L2 LINE L2 -638 2676 2619 854 141 7 28 chr17 922403 922545 -88582008 + AluJo SINE Alu 1 139 -173 1677 142 0 76 chr17 922547 922688 -88581865 + AluJo SINE Alu 5 110 -202 2465 45 0 0 chr17 922688 922977 -88581576 + AluY SINE Alu 5 293 -18 1677 142 0 76 chr17 922977 923152 -88581401 + AluJo SINE Alu 110 297 -15 295 174 153 41 chr17 923278 923295 -88581258 + MER5A DNA MER1_type 1 15 -174 1992 118 20 14 chr17 923295 923592 -88580961 + AluSx SINE Alu 3 301 -11 295 174 153 41 chr17 923592 923672 -88580881 + MER5A DNA MER1_type 15 109 -80 263 254 35 12 chr17 924325 924494 -88580059 + (CACCT)n Simple_repeat Simple_repeat 1 173 0 213 272 47 6 chr17 924532 924701 -88579852 + (CACCT)n Simple_repeat Simple_repeat 3 178 0 1999 101 39 3 chr17 925078 925364 -88579189 - AluSc SINE Alu -13 296 1 1072 168 0 0 chr17 925513 925680 -88578873 - AluJb SINE Alu -9 303 137 2224 94 0 0 chr17 926054 926342 -88578211 + AluSx SINE Alu 1 288 -24 1297 223 41 0 chr17 926365 926684 -88577869 - MER63 DNA MER1_type -49 1013 682 1538 84 10 0 chr17 926685 926888 -88577665 - AluSq SINE Alu -5 308 104 1217 98 5 79 chr17 926888 927091 -88577462 - AluSg SINE Alu -122 188 1 1711 61 5 0 chr17 928155 928369 -88576184 + AluY SINE Alu 84 298 -13 514 228 65 8 chr17 928813 928936 -88575617 + MIR SINE MIR 63 192 -70 324 0 0 0 chr17 929864 929900 -88574653 + (TA)n Simple_repeat Simple_repeat 1 36 0 666 191 34 14 chr17 930296 930443 -88574110 - MER20 DNA MER1_type -1 218 69 1884 110 50 11 chr17 930443 930724 -88573829 - AluSg SINE Alu -18 292 1 25 0 0 0 chr17 932684 932709 -88571844 + AT_rich Low_complexity Low_complexity 1 25 0 824 249 40 20 chr17 938152 938353 -88566200 - MIR SINE MIR -37 225 21 261 329 58 44 chr17 942090 942227 -88562326 + MIR SINE MIR 16 154 -54 230 322 59 67 chr17 942797 943036 -88561517 - MER102b DNA MER1_type -9 332 96 300 281 49 0 chr17 944026 944108 -88560445 - MIR SINE MIR -79 183 98 244 290 160 10 chr17 944212 944312 -88560241 + MIR SINE MIR 94 208 -54 848 239 24 0 chr17 944487 944700 -88559853 - Charlie2 DNA MER1_type -41 2821 2604 2540 40 0 0 chr17 944700 944997 -88559556 + AluY SINE Alu 1 297 -14 520 254 103 15 chr17 945085 945097 -88559456 - Charlie2 DNA MER1_type -242 2620 2610 2290 73 0 26 chr17 945097 945410 -88559143 + AluY SINE Alu 1 305 -6 520 254 103 15 chr17 945410 945669 -88558884 - Charlie2 DNA MER1_type -252 2610 2325 1756 108 4 12 chr17 945675 945924 -88558629 + AluSq SINE Alu 1 247 -66 183 80 0 0 chr17 946274 946299 -88558254 + (CGGA)n Simple_repeat Simple_repeat 4 28 0 203 387 0 23 chr17 946398 946571 -88557982 + (CAGA)n Simple_repeat Simple_repeat 1 169 0 203 343 14 34 chr17 946623 946769 -88557784 + (CGGA)n Simple_repeat Simple_repeat 4 146 0 * 217 376 0 22 chr17 946742 946920 -88557633 + (CAGA)n Simple_repeat Simple_repeat 4 177 0 1236 264 77 22 chr17 946932 947286 -88557267 + L1MB3 LINE L1 5748 6128 -55 2188 95 3 7 chr17 947286 947581 -88556972 - AluSx SINE Alu -18 294 1 1236 264 77 22 chr17 947581 947631 -88556922 + L1MB3 LINE L1 6128 6174 -9 511 202 0 37 chr17 947631 947740 -88556813 - AluSg/x SINE Alu -4 305 201 295 376 27 7 chr17 948331 948480 -88556073 + MIR3 SINE MIR 29 180 -28 2097 118 0 3 chr17 948480 948777 -88555776 + AluSx SINE Alu 1 296 -16 277 327 149 14 chr17 949604 949812 -88554741 + MIR SINE MIR 26 261 -1 556 122 14 32 chr17 949902 949952 -88554601 - AluSg/x SINE Alu -131 181 132 1995 141 0 7 chr17 949952 950257 -88554296 - AluSx SINE Alu -9 303 1 556 122 14 32 chr17 950257 950326 -88554227 - AluSg/x SINE Alu -180 132 67 1263 140 5 0 chr17 950329 950522 -88554031 - AluSg SINE Alu -116 194 1 735 76 0 0 chr17 950522 950614 -88553939 - AluSg SINE Alu -177 133 42 336 195 25 33 chr17 950838 950930 -88553623 + MIR SINE MIR 65 156 -52 2048 97 49 0 chr17 953262 953550 -88551003 - AluSg SINE Alu -6 304 3 374 324 0 0 chr17 953762 953898 -88550655 - MER117 DNA MER1_type -52 145 10 299 273 0 29 chr17 954910 955049 -88549504 + C-rich Low_complexity Low_complexity 4 138 0 299 436 22 0 chr17 955280 955459 -88549094 + L2 LINE L2 3111 3293 -20 2173 102 7 3 chr17 955877 956180 -88548373 + AluSx SINE Alu 1 304 -8 262 168 5 138 chr17 956545 956741 -88547812 + G-rich Low_complexity Low_complexity 4 173 0 309 342 32 45 chr17 957100 957255 -88547298 - L1M4 LINE L1 -3110 3036 2884 2189 103 10 0 chr17 957275 957575 -88546978 - AluSx SINE Alu -7 305 3 892 138 0 0 chr17 957579 957709 -88546844 - AluSq/x SINE Alu -181 132 3 269 329 27 13 chr17 957723 957872 -88546681 - L1M4 LINE L1 -3321 2825 2675 2139 111 7 0 chr17 958064 958361 -88546192 - AluSx SINE Alu -13 299 1 370 303 49 32 chr17 959167 959352 -88545201 + MER117 DNA MER1_type 6 193 -4 2143 118 3 9 chr17 959450 959765 -88544788 - AluSq SINE Alu 0 313 1 550 324 70 5 chr17 960283 960496 -88544057 + MIR SINE MIR 28 254 -8 255 352 50 0 chr17 960544 960726 -88543827 + L1ME4a LINE L1 5743 5933 -188 2326 80 0 26 chr17 960914 961225 -88543328 + AluSx SINE Alu 1 303 -9 549 282 124 5 chr17 961756 961958 -88542595 + MIR SINE MIR 14 239 -23 2050 128 0 3 chr17 962413 962703 -88541850 + AluSx SINE Alu 1 289 -23 1581 100 0 0 chr17 963437 963647 -88540906 - AluSg/x SINE Alu -13 297 88 248 143 0 171 chr17 963788 964004 -88540549 + (AGGGGG)n Simple_repeat Simple_repeat 1 179 0 257 144 0 164 chr17 964072 964267 -88540286 + (AGGGGG)n Simple_repeat Simple_repeat 4 166 0 232 291 0 0 chr17 964492 964547 -88540006 + MIR SINE MIR 16 70 -192 335 323 81 6 chr17 965065 965226 -88539327 + MIR SINE MIR 16 188 -74 248 254 87 56 chr17 965999 966125 -88538428 + MIR SINE MIR 81 210 -52 943 103 0 0 chr17 966130 966256 -88538297 + FLAM_C SINE Alu 1 126 -7 371 233 12 0 chr17 966442 966528 -88538025 - MIR SINE MIR -141 121 35 2226 84 0 3 chr17 966569 966868 -88537685 - AluSg SINE Alu -12 298 1 270 335 28 50 chr17 967555 967737 -88536816 + L2 LINE L2 2671 2848 -466 530 29 15 0 chr17 968350 968418 -88536135 + (TG)n Simple_repeat Simple_repeat 2 70 0 1705 108 0 0 chr17 968418 968650 -88535903 - AluSg/x SINE Alu -11 301 70 432 67 0 0 chr17 968685 968745 -88535808 + (TG)n Simple_repeat Simple_repeat 1 60 0 212 330 88 51 chr17 968749 968949 -88535604 + MIR SINE MIR 19 216 -46 2326 100 0 0 chr17 969171 969481 -88535072 - AluSq SINE Alu -3 310 1 1125 277 71 30 chr17 969989 970524 -88534029 + MER74B LTR ERVL 56 612 -10 252 337 22 15 chr17 970835 970970 -88533583 + L1MC/D LINE L1 5440 5575 -578 2239 91 3 0 chr17 971171 971469 -88533084 + AluSx SINE Alu 2 300 -12 2275 89 0 22 chr17 971752 972066 -88532487 + AluSg SINE Alu 1 307 -3 511 107 27 0 chr17 972631 972706 -88531847 - AluS SINE Alu -235 77 1 2394 72 3 0 chr17 973402 973707 -88530846 + AluSx SINE Alu 1 306 -6 1591 114 5 0 chr17 975247 975466 -88529087 + AluSq SINE Alu 80 299 -14 473 280 36 36 chr17 976040 976208 -88528345 + MER5B DNA MER1_type 11 178 0 32 26 0 0 chr17 976215 976254 -88528299 + AT_rich Low_complexity Low_complexity 1 39 0 2178 109 0 0 chr17 976263 976557 -88527996 + AluSx SINE Alu 1 294 -18 316 96 115 0 chr17 976557 976609 -88527944 - AluJo/FLAM SINE Alu -182 120 63 527 132 13 0 chr17 976615 976691 -88527862 - AluJ/FLAM SINE Alu -220 92 16 322 302 101 23 chr17 977478 977607 -88526946 - MIR SINE MIR -14 248 110 243 0 0 0 chr17 978608 978635 -88525918 + (TG)n Simple_repeat Simple_repeat 1 27 0 223 167 30 0 chr17 979511 979577 -88524976 + G-rich Low_complexity Low_complexity 1 68 0 228 200 0 0 chr17 979685 979745 -88524808 + (CA)n Simple_repeat Simple_repeat 1 60 0 2385 96 0 0 chr17 980010 980322 -88524231 + AluSx SINE Alu 1 312 0 995 92 0 0 chr17 981747 981878 -88522675 - AluJb SINE Alu -181 131 1 2214 92 3 0 chr17 982088 982380 -88522173 - AluSx SINE Alu -19 293 1 196 262 33 49 chr17 983124 983185 -88521368 - L3 LINE CR1 -1 1576 1517 * 406 269 35 21 chr17 983182 983327 -88521226 - MER5A DNA MER1_type -6 183 37 2135 108 27 0 chr17 983353 983649 -88520904 + AluSx SINE Alu 1 304 -8 338 248 9 57 chr17 983650 983755 -88520798 - MIR3 SINE MIR -44 164 65 216 0 0 0 chr17 983766 983790 -88520763 + (T)n Simple_repeat Simple_repeat 1 24 0 24 0 0 0 chr17 983823 983847 -88520706 + AT_rich Low_complexity Low_complexity 1 24 0 2080 94 59 0 chr17 984615 984902 -88519651 + AluSx SINE Alu 1 304 -8 312 295 27 9 chr17 985199 985311 -88519242 + L1ME LINE L1 5416 5529 -635 2211 75 24 0 chr17 985313 985605 -88518948 - AluSp SINE Alu -14 299 1 939 81 0 0 chr17 985614 985738 -88518815 - AluSg/x SINE Alu -10 300 177 1454 34 0 22 chr17 985839 986017 -88518536 - AluY SINE Alu -137 174 1 287 263 32 0 chr17 986022 986117 -88518436 + L1ME LINE L1 5522 5619 -551 1085 220 27 8 chr17 986206 986465 -88518088 + MER33 DNA MER1_type 8 271 -53 808 169 0 8 chr17 986466 986596 -88517957 + AluSq/x SINE Alu 1 129 -183 387 0 0 0 chr17 988094 988137 -88516416 + (TAA)n Simple_repeat Simple_repeat 1 43 0 683 232 23 114 chr17 988144 988214 -88516339 - MIR SINE MIR -1 261 186 2205 107 0 22 chr17 988214 988533 -88516020 - AluSx SINE Alu 0 312 1 2185 116 0 7 chr17 988534 988837 -88515716 - AluSg SINE Alu -9 301 1 876 160 0 0 chr17 988844 988975 -88515578 - FLAM_C SINE Alu -2 131 1 683 232 23 114 chr17 988975 989157 -88515396 - MIR SINE MIR -82 180 23 2421 60 0 0 chr17 989319 989617 -88514936 + AluSq SINE Alu 1 298 -15 304 313 119 24 chr17 989712 989995 -88514558 - L2 LINE L2 -222 3050 2740 231 275 12 50 chr17 992664 992744 -88511809 + L3 LINE CR1 1426 1502 -75 196 252 184 78 chr17 993287 993390 -88511163 + MIR SINE MIR 38 151 -111 2130 123 0 3 chr17 993453 993754 -88510799 - AluSx SINE Alu -12 300 1 533 247 121 37 chr17 996366 996392 -88508161 - MIR SINE MIR -37 225 203 2360 96 0 0 chr17 996392 996695 -88507858 + AluSx SINE Alu 2 304 -8 533 247 121 37 chr17 996695 996858 -88507695 - MIR SINE MIR -59 203 20 225 269 15 30 chr17 997077 997144 -88507409 - MIR SINE MIR -56 152 87 2289 68 0 16 chr17 997148 997459 -88507094 - AluY SINE Alu -5 306 1 291 269 200 0 chr17 997524 997654 -88506899 + MER112 DNA MER1_type 66 221 -39 2220 71 0 4 chr17 997889 998169 -88506384 - AluSq SINE Alu -34 279 1 1813 142 14 7 chr17 998169 998458 -88506095 - AluSx SINE Alu -21 291 1 2316 91 7 0 chr17 998928 999235 -88505318 + AluSq SINE Alu 1 309 -4 2269 98 0 0 chr17 999910 1000206 -88504347 - AluSx SINE Alu -16 296 1 1164 54 0 20 chr17 1000209 1000357 -88504196 - AluSq/x SINE Alu -167 145 1 305 237 246 17 chr17 1000402 1000520 -88504033 - L1ME4a LINE L1 -14 6107 5963 342 232 174 51 chr17 1000695 1000806 -88503747 - L2 LINE L2 0 3313 3180 2590 42 0 0 chr17 1000806 1001115 -88503438 - AluY SINE Alu -2 309 1 342 232 174 51 chr17 1001115 1001141 -88503412 - L2 LINE L2 -133 3180 3159 920 205 44 61 chr17 1001419 1001531 -88503022 + MLT1D LTR MaLR 248 360 -145 1197 111 156 0 chr17 1001531 1001730 -88502823 + MER30 DNA MER1_type 1 230 0 920 205 44 61 chr17 1001730 1001788 -88502765 + MLT1D LTR MaLR 360 417 -88 2137 105 3 3 chr17 1001788 1002092 -88502461 - AluSx SINE Alu -8 304 1 920 205 44 61 chr17 1002092 1002192 -88502361 + MLT1D LTR MaLR 417 505 0 295 232 20 30 chr17 1003980 1004079 -88500474 + MER113 DNA MER1_type? 1 98 -423 1844 92 0 0 chr17 1004086 1004326 -88500227 - AluSg/x SINE Alu -7 305 66 2332 95 0 0 chr17 1004961 1005265 -88499288 - AluSx SINE Alu -8 304 1 206 299 65 56 chr17 1006330 1006437 -88498116 - MIR SINE MIR -56 206 99 207 244 0 0 chr17 1007552 1007597 -88496956 + G-rich Low_complexity Low_complexity 1 45 0 180 0 0 0 chr17 1007669 1007689 -88496864 + (CCG)n Simple_repeat Simple_repeat 2 21 0 512 277 47 14 chr17 1008839 1009052 -88495501 - Charlie8 DNA MER1_type -2183 234 15 934 141 14 0 chr17 1010890 1011032 -88493521 + FRAM SINE Alu 2 145 -31 300 137 0 0 chr17 1011034 1011085 -88493468 + (GGAA)n Simple_repeat Simple_repeat 4 54 0 483 305 71 46 chr17 1011459 1011698 -88492855 - L2 LINE L2 -4 3268 3024 2377 84 0 0 chr17 1011715 1012023 -88492530 - AluSx SINE Alu -4 308 1 306 318 18 18 chr17 1012025 1012135 -88492418 + L2 LINE L2 2997 3106 -166 666 177 9 0 chr17 1012455 1012568 -88491985 + FRAM SINE Alu 49 162 -14 2074 124 3 0 chr17 1012571 1012869 -88491684 + AluSx SINE Alu 1 299 -13 2407 65 0 0 chr17 1012873 1013166 -88491387 + AluSx SINE Alu 1 293 -19 504 164 22 104 chr17 1013255 1013389 -88491164 - L2 LINE L2 0 3313 3191 2189 88 0 7 chr17 1014025 1014321 -88490232 + AluSx SINE Alu 1 294 -18 2195 92 23 0 chr17 1014327 1014632 -88489921 + AluSx SINE Alu 1 312 0 581 230 24 0 chr17 1014717 1014843 -88489710 + MIR SINE MIR 48 176 -86 189 339 0 0 chr17 1015068 1015127 -88489426 + MIR SINE MIR 90 148 -114 185 333 91 10 chr17 1017940 1018039 -88486514 - L2 LINE L2 -5 3308 3202 802 251 6 0 chr17 1018243 1018406 -88486147 - FAM SINE Alu -11 164 1 561 270 20 0 chr17 1018406 1018543 -88486010 + MIR SINE MIR 82 224 -38 2079 112 0 31 chr17 1018604 1018925 -88485628 - AluSx SINE Alu -1 311 1 362 292 26 50 chr17 1019085 1019244 -88485309 - MIR3 SINE MIR -62 146 12 279 286 0 0 chr17 1020311 1020381 -88484172 - MIR SINE MIR -68 140 71 2277 104 0 0 chr17 1020382 1020681 -88483872 - AluSx SINE Alu -13 299 1 1814 244 20 75 chr17 1020751 1021301 -88483252 + MLT2B1 LTR ERVL 1 520 0 23 0 0 0 chr17 1023913 1023936 -88480617 + GC_rich Low_complexity Low_complexity 1 23 0 239 308 92 0 chr17 1025241 1025361 -88479192 + L2 LINE L2 3142 3272 0 587 247 88 83 chr17 1026857 1027278 -88477275 + MLT1J LTR MaLR 4 426 -85 397 257 59 26 chr17 1027281 1027433 -88477120 + MLT1J LTR MaLR 351 507 -4 739 95 0 1 chr17 1027551 1027661 -88476892 + L1PA8 LINE L1 5958 6068 -106 1909 128 23 7 chr17 1027661 1027967 -88476586 + AluY SINE Alu 1 311 0 739 95 0 1 chr17 1027967 1027980 -88476573 + L1PA8 LINE L1 6068 6080 -94 2070 145 0 0 chr17 1028072 1028382 -88476171 + AluSg SINE Alu 1 310 0 305 345 44 0 chr17 1028431 1028544 -88476009 + L1MC4 LINE L1 7924 8041 -1 785 270 104 37 chr17 1028994 1029427 -88475126 + MLT1C LTR MaLR 6 467 0 2393 73 0 3 chr17 1030519 1030819 -88473734 - AluSp SINE Alu -14 299 1 507 242 47 32 chr17 1030821 1031011 -88473542 - Charlie2 DNA MER1_type -556 2306 2114 460 137 41 0 chr17 1031025 1031098 -88473455 + FLAM SINE Alu 57 132 -11 892 275 30 0 chr17 1031099 1031361 -88473192 - Charlie2 DNA MER1_type -737 2125 1856 2361 76 3 0 chr17 1031375 1031677 -88472876 - AluSx SINE Alu -9 303 1 497 268 22 0 chr17 1031799 1031937 -88472616 - Charlie2 DNA MER1_type -2633 149 9 2308 98 7 0 chr17 1032524 1032829 -88471724 - AluSq SINE Alu -6 307 1 1057 82 0 0 chr17 1032829 1032964 -88471589 - AluSq/x SINE Alu -178 135 1 595 217 25 17 chr17 1032968 1033088 -88471465 - FLAM_C SINE Alu -15 128 8 2392 42 0 0 chr17 1033095 1033403 -88471150 - AluY SINE Alu 0 308 1 318 200 0 0 chr17 1033414 1033474 -88471079 - L1MA6 LINE L1 -5 6295 6236 265 309 161 2 chr17 1033663 1033815 -88470738 + MIR3 SINE MIR 10 187 -75 423 339 51 18 chr17 1033816 1034049 -88470504 - MIR SINE MIR -3 259 25 2362 70 3 0 chr17 1035143 1035444 -88469109 - AluSx SINE Alu -10 302 1 2072 60 53 21 chr17 1036585 1036868 -88467685 + AluSc SINE Alu 1 292 -17 820 82 4 2 chr17 1036938 1037194 -88467359 + AluSx SINE Alu 1 308 -4 2358 88 0 0 chr17 1038803 1039110 -88465443 + AluSx SINE Alu 1 307 -5 227 289 141 58 chr17 1039436 1039557 -88464996 + MIR SINE MIR 10 140 -122 1832 154 16 0 chr17 1039565 1039871 -88464682 + AluJb SINE Alu 1 311 -1 2350 62 7 10 chr17 1039898 1040206 -88464347 + AluY SINE Alu 1 307 -4 1276 101 0 0 chr17 1040207 1040386 -88464167 + AluSg/x SINE Alu 134 312 0 420 289 237 20 chr17 1040461 1040953 -88463600 + L2 LINE L2 2688 3297 -16 397 278 43 43 chr17 1041201 1041363 -88463190 - MIR3 SINE MIR -42 166 5 2096 76 0 28 chr17 1043170 1043459 -88461094 - AluSx SINE Alu -31 281 1 565 103 0 0 chr17 1043459 1043537 -88461016 - AluSq/x SINE Alu -177 135 58 202 244 0 0 chr17 1044163 1044208 -88460345 + A-rich Low_complexity Low_complexity 1 45 0 331 79 20 59 chr17 1046909 1047010 -88457543 + (TCCC)n Simple_repeat Simple_repeat 2 98 0 212 286 165 23 chr17 1048025 1048158 -88456395 - MIR SINE MIR -108 154 3 351 305 105 42 chr17 1048397 1048587 -88455966 - MIR SINE MIR -60 202 1 1867 127 64 0 chr17 1049030 1049313 -88455240 - AluSx SINE Alu -11 301 1 189 289 0 56 chr17 1049315 1049405 -88455148 - L2 LINE L2 0 3272 3188 429 317 0 16 chr17 1050362 1050545 -88454008 + C-rich Low_complexity Low_complexity 1 180 0 2471 56 0 0 chr17 1250548 1250836 -88253717 - AluY SINE Alu -23 288 1 1000 217 14 9 chr17 1250840 1251057 -88253496 - AluJo SINE Alu -10 302 85 1509 204 10 10 chr17 1251088 1251265 -88253288 - AluJb SINE Alu 0 312 133 1363 240 10 3 chr17 1251265 1251565 -88252988 - AluSg1 SINE Alu -7 302 1 1509 204 10 10 chr17 1251565 1251686 -88252867 - AluJb SINE Alu -178 134 14 2064 110 48 14 chr17 1251857 1252147 -88252406 + AluSx SINE Alu 1 300 -12 2239 120 0 3 chr17 1252152 1252461 -88252092 + AluSx SINE Alu 1 308 -4 603 229 76 0 chr17 1252473 1252617 -88251936 + FRAM SINE Alu 1 155 -21 1332 209 77 33 chr17 1252617 1253047 -88251506 + L1MB4 LINE L1 5598 6046 -134 2331 53 0 0 chr17 1253148 1253437 -88251116 + AluY SINE Alu 18 306 0 1128 192 77 86 chr17 1253748 1253966 -88250587 + L1MB8 LINE L1 5827 6045 -133 2438 83 3 10 chr17 1253966 1254279 -88250274 - AluY SINE Alu 0 311 1 2335 105 0 7 chr17 1254280 1254586 -88249967 - AluSx SINE Alu -8 304 1 1128 192 77 86 chr17 1254586 1254714 -88249839 + L1MB8 LINE L1 6044 6172 -6 225 382 7 15 chr17 1254803 1254939 -88249614 - MIR SINE MIR -36 226 92 1459 167 16 4 chr17 1255151 1255396 -88249157 - AluSx SINE Alu -64 248 1 461 172 255 0 chr17 1255745 1255889 -88248664 - MER58B DNA MER1_type 0 341 45 998 135 0 27 chr17 1255897 1256045 -88248508 + AluJo SINE Alu 1 144 -168 198 0 0 0 chr17 1256049 1256071 -88248482 + (A)n Simple_repeat Simple_repeat 1 22 0 1446 108 0 5 chr17 1256079 1256264 -88248289 + AluSq SINE Alu 2 185 -128 1348 162 0 0 chr17 1256364 1256568 -88247985 + AluSp SINE Alu 105 308 -5 568 187 14 29 chr17 1256568 1256707 -88247846 - L1MC3 LINE L1 -37 7748 7612 1291 156 0 0 chr17 1256707 1256899 -88247654 + AluJo SINE Alu 104 295 -17 2260 97 10 7 chr17 1256901 1257201 -88247352 + AluSx SINE Alu 1 301 -11 2458 84 3 3 chr17 1257633 1257943 -88246610 + AluSx SINE Alu 1 310 -2 290 297 72 0 chr17 1258007 1258118 -88246435 + MLT1K LTR MaLR 168 286 -302 477 263 60 65 chr17 1258205 1258422 -88246131 + MLT1K LTR MaLR 346 561 -27 1488 123 0 31 chr17 1258511 1258738 -88245815 - AluSg/x SINE Alu 0 312 93 1761 164 21 3 chr17 1258740 1259026 -88245527 - AluJb SINE Alu -15 297 7 1058 63 8 0 chr17 1259348 1259475 -88245078 + AluY SINE Alu 3 130 -181 1098 179 56 0 chr17 1259503 1259698 -88244855 - AluJb SINE Alu -22 290 85 2093 128 42 0 chr17 1260112 1260401 -88244152 + AluSx SINE Alu 1 301 -11 2592 74 0 0 chr17 1260401 1260712 -88243841 + AluY SINE Alu 1 311 0 285 186 0 58 chr17 1260760 1260846 -88243707 + L1MEd LINE L1 22 102 -6017 455 200 0 0 chr17 1261335 1261415 -88243138 - AluJb SINE Alu -96 216 137 1697 182 7 0 chr17 1261415 1261701 -88242852 - AluSq SINE Alu -4 309 22 2498 66 0 10 chr17 1261833 1262137 -88242416 - AluY SINE Alu -10 301 1 1144 148 0 0 chr17 1262140 1262309 -88242244 - FRAM SINE Alu -12 164 1 1200 160 104 76 chr17 1262653 1262941 -88241612 + AluJb SINE Alu 1 296 -16 1861 144 10 17 chr17 1263193 1263329 -88241224 + AluJb SINE Alu 1 136 -176 2072 130 10 0 chr17 1263329 1263628 -88240925 + AluSg1 SINE Alu 1 302 -7 1861 144 10 17 chr17 1263628 1263783 -88240770 + AluJb SINE Alu 136 290 -22 2298 79 10 3 chr17 1263903 1264194 -88240359 - AluSg SINE Alu -17 293 1 2370 84 3 0 chr17 1264447 1264746 -88239807 + AluY SINE Alu 1 300 -11 2187 114 3 0 chr17 1265675 1265974 -88238579 + AluY SINE Alu 1 300 -11 2148 101 13 20 chr17 1266290 1266596 -88237957 - AluSq SINE Alu -4 309 6 2441 93 0 0 chr17 1266706 1267006 -88237547 - AluSg SINE Alu -10 300 1 2381 82 0 10 chr17 1267029 1267332 -88237221 - AluSx SINE Alu -12 300 1 596 172 0 97 chr17 1267396 1267470 -88237083 + FLAM_A SINE Alu 2 57 -245 1668 181 31 0 chr17 1267470 1267758 -88236795 - AluSx SINE Alu -15 297 1 596 172 0 97 chr17 1267758 1267828 -88236725 + FLAM_A SINE Alu 57 132 -170 1451 215 29 26 chr17 1267828 1268139 -88236414 + AluJo SINE Alu 1 312 0 299 242 290 11 chr17 1268389 1268544 -88236009 + MIR SINE MIR 11 121 -141 2173 124 13 0 chr17 1268544 1268850 -88235703 + AluSx SINE Alu 1 310 -2 299 242 290 11 chr17 1268850 1268880 -88235673 + MIR SINE MIR 121 248 -14 454 111 0 0 chr17 1269007 1269070 -88235483 + AluJ/FLAM SINE Alu 4 66 -246 324 148 0 0 chr17 1269163 1269217 -88235336 + AluJ/FRAM SINE Alu 216 269 -33 393 143 14 29 chr17 1269635 1269705 -88234848 - AluJ/FLAM SINE Alu -233 69 1 625 261 38 0 chr17 1269712 1269869 -88234684 - FAM SINE Alu -12 163 1 1103 165 42 24 chr17 1269902 1270114 -88234439 + AluY SINE Alu 84 299 -12 2283 82 6 32 chr17 1270114 1270429 -88234124 + AluSp SINE Alu 1 307 -6 2507 58 7 0 chr17 1270438 1270732 -88233821 + AluY SINE Alu 1 296 -15 1151 81 0 0 chr17 1271498 1271634 -88232919 - AluSc SINE Alu -173 136 1 2519 50 0 7 chr17 1272162 1272464 -88232089 - AluY SINE Alu -11 300 1 2293 106 0 25 chr17 1273168 1273488 -88231065 - AluSx SINE Alu 0 312 1 1078 166 0 117 chr17 1273653 1273719 -88230834 + AluJb SINE Alu 66 138 -174 2400 77 0 7 chr17 1273719 1274016 -88230537 + AluSg SINE Alu 1 295 -15 2430 80 6 13 chr17 1274020 1274333 -88230220 + AluY SINE Alu 1 311 0 1078 166 0 117 chr17 1274333 1274437 -88230116 + AluJb SINE Alu 141 206 -106 2115 128 0 10 chr17 1274437 1274742 -88229811 + AluSx SINE Alu 1 302 -10 1078 166 0 117 chr17 1274742 1274812 -88229741 + AluJb SINE Alu 206 283 -29 2104 134 3 0 chr17 1274814 1275112 -88229441 + AluSx SINE Alu 3 301 -11 21 0 0 0 chr17 1275186 1275207 -88229346 + AT_rich Low_complexity Low_complexity 1 21 0 1042 201 52 81 chr17 1275207 1275275 -88229278 + AluJo SINE Alu 1 69 -233 1866 168 11 0 chr17 1275275 1275560 -88228993 + AluJb SINE Alu 9 296 -16 1884 160 0 3 chr17 1275562 1275862 -88228691 + AluJb SINE Alu 1 299 -13 1042 201 52 81 chr17 1275862 1275929 -88228624 + AluJo SINE Alu 70 137 -165 2305 82 0 7 chr17 1275929 1276221 -88228332 + AluSg1 SINE Alu 1 290 -19 1042 201 52 81 chr17 1276221 1276390 -88228163 + AluJo SINE Alu 137 300 -2 446 176 11 11 chr17 1276395 1276486 -88228067 + FLAM_A SINE Alu 35 125 -17 1646 168 51 10 chr17 1276491 1276783 -88227770 + AluJb SINE Alu 1 304 -8 1305 159 151 4 chr17 1276809 1276967 -88227586 - AluJo SINE Alu -24 288 155 219 36 0 0 chr17 1276967 1276995 -88227558 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1305 159 151 4 chr17 1276995 1277087 -88227466 - AluJo SINE Alu -157 155 1 780 159 0 8 chr17 1277089 1277221 -88227332 - FLAM_C SINE Alu -2 131 1 1582 169 3 71 chr17 1277222 1277404 -88227149 - AluJo SINE Alu -4 308 156 2570 61 0 0 chr17 1277404 1277701 -88226852 - AluY SINE Alu -14 297 1 1582 169 3 71 chr17 1277701 1277844 -88226709 - AluJo SINE Alu -156 156 5 1805 162 27 7 chr17 1277855 1278152 -88226401 - AluJb SINE Alu -9 303 1 2274 67 0 21 chr17 1278318 1278603 -88225950 + AluY SINE Alu 1 279 -32 1366 168 82 8 chr17 1278603 1278859 -88225694 + AluJb SINE Alu 9 283 -29 1987 169 0 0 chr17 1279289 1279585 -88224968 + AluJb SINE Alu 1 296 -16 2261 94 0 39 chr17 1279753 1280060 -88224493 + AluSx SINE Alu 1 295 -17 781 173 0 0 chr17 1280368 1280501 -88224052 + FLAM_A SINE Alu 1 133 0 230 136 23 0 chr17 1281814 1281858 -88222695 + CT-rich Low_complexity Low_complexity 3 47 0 757 207 23 52 chr17 1281898 1282072 -88222481 + AluJb SINE Alu 3 171 -141 189 196 0 0 chr17 1282228 1282274 -88222279 + T-rich Low_complexity Low_complexity 1 46 0 1977 143 31 0 chr17 1282368 1282662 -88221891 + AluJb SINE Alu 1 303 -9 1156 168 0 0 chr17 1282935 1283108 -88221445 + AluJb SINE Alu 137 309 -3 2330 80 3 10 chr17 1283578 1283879 -88220674 - AluSx SINE Alu -13 299 1 1506 114 59 62 chr17 1284293 1284599 -88219954 + AluY SINE Alu 2 306 -5 183 179 26 0 chr17 1284631 1284670 -88219883 + MIR SINE MIR 106 145 -117 349 337 86 11 chr17 1285280 1285467 -88219086 - MIR SINE MIR -10 252 52 430 265 27 27 chr17 1285541 1285688 -88218865 + MIR SINE MIR 70 216 -46 2019 103 4 0 chr17 1285712 1285974 -88218579 + AluSx SINE Alu 1 263 -49 2367 101 0 0 chr17 1286001 1286307 -88218246 + AluSg SINE Alu 1 306 -4 710 276 47 41 chr17 1286309 1286649 -88217904 - MLT1J2 LTR MaLR -1 449 108 388 258 24 24 chr17 1286672 1286796 -88217757 - MLT1F LTR MaLR 0 542 419 2323 114 7 0 chr17 1286895 1287203 -88217350 + AluSg SINE Alu 1 310 0 2502 68 0 10 chr17 1287213 1287524 -88217029 + AluY SINE Alu 1 308 -3 226 311 0 0 chr17 1287586 1287660 -88216893 + L1M4 LINE L1 4645 4718 -1428 1692 128 120 0 chr17 1287884 1288150 -88216403 - AluJo SINE Alu -14 298 1 2199 100 13 19 chr17 1288213 1288523 -88216030 - AluSx SINE Alu -4 308 1 1166 59 0 0 chr17 1288523 1288658 -88215895 - AluSq/x SINE Alu -177 135 1 394 245 31 87 chr17 1289156 1289310 -88215243 - MIR SINE MIR -10 252 110 2393 94 0 7 chr17 1289310 1289619 -88214934 + AluSx SINE Alu 1 307 -5 394 245 31 87 chr17 1289619 1289660 -88214893 - MIR SINE MIR -152 110 68 839 116 14 43 chr17 1290033 1290171 -88214382 - AluJb SINE Alu -178 134 1 2286 101 14 0 chr17 1290534 1290831 -88213722 + AluSg SINE Alu 1 301 -9 2498 87 0 3 chr17 1292436 1292747 -88211806 + AluSg SINE Alu 1 310 0 188 306 56 14 chr17 1293153 1293225 -88211328 + L2 LINE L2 3237 3311 -2 185 213 106 0 chr17 1293384 1293431 -88211122 + L2 LINE L2 3257 3308 -5 25 0 0 0 chr17 1294096 1294121 -88210432 + AT_rich Low_complexity Low_complexity 1 25 0 2157 117 0 13 chr17 1294242 1294541 -88210012 - AluSq SINE Alu -17 296 2 373 105 0 0 chr17 1294684 1294741 -88209812 + Alu SINE Alu 241 297 -5 2332 105 0 10 chr17 1294922 1295237 -88209316 - AluSx SINE Alu -2 310 1 185 182 0 45 chr17 1295237 1295272 -88209281 - L2 LINE L2 -10 3303 3269 * 186 212 242 0 chr17 1295244 1295310 -88209243 - MIR SINE MIR -11 251 170 1983 127 0 3 chr17 1295312 1295619 -88208934 - AluSp SINE Alu -7 306 1 1513 169 3 41 chr17 1295619 1295858 -88208695 - L1M3 LINE L1 -439 5732 5486 2020 106 0 3 chr17 1295858 1296186 -88208367 - AluSx SINE Alu 0 327 1 1524 170 35 14 chr17 1296191 1296479 -88208074 - AluJb SINE Alu -18 294 1 2196 91 7 0 chr17 1296484 1296780 -88207773 - AluY SINE Alu -13 298 1 1513 169 3 41 chr17 1296780 1296822 -88207731 - L1M3 LINE L1 -693 5478 5449 1116 210 25 43 chr17 1296950 1297127 -88207426 + L1M4 LINE L1 4490 4660 -1486 2128 110 0 0 chr17 1297127 1297426 -88207127 + AluSx SINE Alu 1 299 -13 1116 210 25 43 chr17 1297426 1297572 -88206981 + L1M4 LINE L1 4660 4807 -1339 1236 89 0 0 chr17 1297574 1297742 -88206811 + AluYa5 SINE Alu 136 303 -8 925 264 49 37 chr17 1297742 1297840 -88206713 + L1M4 LINE L1 4796 4891 -1255 2228 100 0 7 chr17 1297840 1298150 -88206403 + AluSx SINE Alu 1 308 -4 925 264 49 37 chr17 1298150 1298456 -88206097 + L1M4 LINE L1 4891 5205 -941 2223 77 3 0 chr17 1298457 1298743 -88205810 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr17 1298743 1298763 -88205790 + (GA)n Simple_repeat Simple_repeat 2 21 0 300 206 59 0 chr17 1298789 1298857 -88205696 - MER5A DNA MER1_type -1 188 117 232 277 76 61 chr17 1299069 1299271 -88205282 - MIR SINE MIR -39 169 3 591 126 11 32 chr17 1299333 1299428 -88205125 + AluSq SINE Alu 77 169 -144 1359 139 18 118 chr17 1299714 1299905 -88204648 - AluJb SINE Alu -14 298 152 2411 62 0 0 chr17 1299905 1300210 -88204343 - AluY SINE Alu -6 305 1 1359 139 18 118 chr17 1300210 1300349 -88204204 - AluJb SINE Alu -160 152 1 2352 44 14 0 chr17 1300491 1300786 -88203767 + AluSq SINE Alu 1 299 -14 214 263 99 134 chr17 1300800 1300835 -88203718 + MER5B DNA MER1_type 6 41 -137 396 0 0 0 chr17 1300835 1300879 -88203674 + (CA)n Simple_repeat Simple_repeat 2 45 0 214 263 99 134 chr17 1300879 1301014 -88203539 + MER5B DNA MER1_type 41 170 -8 348 43 0 0 chr17 1301595 1301641 -88202912 + (CA)n Simple_repeat Simple_repeat 2 47 0 351 239 102 100 chr17 1301739 1302098 -88202455 + L1ME4a LINE L1 5710 6072 -49 2054 106 18 0 chr17 1302098 1302382 -88202171 - AluSq SINE Alu -24 289 1 351 239 102 100 chr17 1302382 1302432 -88202121 + L1ME4a LINE L1 6072 6120 -1 2177 110 0 0 chr17 1303316 1303615 -88200938 + AluSx SINE Alu 1 299 -13 470 117 9 126 chr17 1303636 1303682 -88200871 + MLT1A2 LTR MaLR 1 28 -346 2448 51 0 0 chr17 1303682 1303976 -88200577 + AluY SINE Alu 1 294 -17 470 117 9 126 chr17 1303976 1304040 -88200513 + MLT1A2 LTR MaLR 28 98 -276 1158 114 10 13 chr17 1304148 1304396 -88200157 + AluSg/x SINE Alu 87 300 -10 1688 142 7 14 chr17 1304396 1304678 -88199875 + AluSx SINE Alu 1 280 -32 321 149 0 0 chr17 1305133 1305180 -88199373 - U6 snRNA snRNA -60 47 1 2156 108 0 13 chr17 1305340 1305654 -88198899 - AluSx SINE Alu -2 310 1 511 208 15 69 chr17 1305796 1305926 -88198627 - L2 LINE L2 -4 3309 3187 574 107 49 74 chr17 1306381 1306503 -88198050 - FLAM_C SINE Alu -2 141 23 230 222 0 0 chr17 1306729 1306774 -88197779 + Charlie3 DNA MER1_type 1 45 -2665 * 526 68 0 40 chr17 1306755 1306829 -88197724 + Charlie3 DNA MER1_type 2636 2706 -4 402 130 0 39 chr17 1307146 1307223 -88197330 - Alu SINE Alu -2 309 236 418 185 37 0 chr17 1307240 1307321 -88197232 + FAM SINE Alu 91 174 -11 1671 85 8 24 chr17 1307347 1307594 -88196959 + AluSp SINE Alu 37 279 -34 684 117 162 0 chr17 1307595 1307706 -88196847 + AluSg1 SINE Alu 2 130 -179 1126 129 0 0 chr17 1307835 1307998 -88196555 + AluSg1 SINE Alu 137 299 -13 305 111 0 0 chr17 1308019 1308064 -88196489 + MLT1A2 LTR MaLR 1 45 -329 2229 63 3 3 chr17 1308065 1308352 -88196201 + AluY SINE Alu 1 287 -24 719 218 106 12 chr17 1308353 1308552 -88196001 + MLT1A2 LTR MaLR 186 363 -11 2107 101 0 26 chr17 1308600 1308908 -88195645 + AluSx SINE Alu 1 300 -12 507 212 26 0 chr17 1308912 1309025 -88195528 - L1MB5 LINE L1 -54 6120 6005 2012 110 0 17 chr17 1311008 1311309 -88193244 + AluSx SINE Alu 1 296 -16 324 0 0 0 chr17 1311351 1311387 -88193166 + (TG)n Simple_repeat Simple_repeat 2 37 0 454 73 0 15 chr17 1311387 1311455 -88193098 - L1PA10 LINE L1 -20 6148 6082 1895 93 15 4 chr17 1311558 1311827 -88192726 + AluY SINE Alu 28 299 -12 1276 172 9 122 chr17 1311827 1312164 -88192389 + AluSx SINE Alu 2 300 -2 2156 106 3 3 chr17 1312203 1312505 -88192048 - AluSg SINE Alu -8 302 1 1206 234 38 3 chr17 1312506 1312796 -88191757 - AluJb SINE Alu -12 300 1 1530 142 48 62 chr17 1312804 1313113 -88191440 - AluJo SINE Alu -7 305 1 2200 128 0 0 chr17 1313137 1313449 -88191104 - AluSx SINE Alu 0 312 1 693 303 170 30 chr17 1313499 1313568 -88190985 + L2 LINE L2 2301 2359 -955 1822 138 3 33 chr17 1313568 1313697 -88190856 + AluJb SINE Alu 2 133 -179 2222 88 0 41 chr17 1313697 1314015 -88190538 + AluY SINE Alu 1 305 -6 1955 113 10 17 chr17 1314015 1314316 -88190237 + AluSg1 SINE Alu 1 299 -10 1822 138 3 33 chr17 1314316 1314490 -88190063 + AluJb SINE Alu 131 297 -15 693 303 170 30 chr17 1314490 1314984 -88189569 + L2 LINE L2 2359 2943 -371 1842 152 0 0 chr17 1315261 1315388 -88189165 + AluSx SINE Alu 5 131 -181 2228 95 13 0 chr17 1315388 1315693 -88188860 + AluSx SINE Alu 1 309 -3 1842 152 0 0 chr17 1315693 1315855 -88188698 + AluSx SINE Alu 130 294 -18 1230 252 125 6 chr17 1315862 1316215 -88188338 - MLT1H LTR MaLR -2 547 153 2141 94 3 16 chr17 1316282 1316589 -88187964 + AluY SINE Alu 1 303 -8 249 173 19 19 chr17 1316705 1316757 -88187796 - MLT1H LTR MaLR -388 161 74 1438 199 0 4 chr17 1316786 1317063 -88187490 - AluJb SINE Alu -8 304 29 1984 134 0 0 chr17 1317070 1317362 -88187191 - AluSx SINE Alu -19 293 2 220 200 46 46 chr17 1317393 1317458 -88187095 + MER91 DNA MER1_type 126 190 0 839 238 69 14 chr17 1317663 1317940 -88186613 + L1MB8 LINE L1 5881 6172 -6 774 138 9 0 chr17 1317984 1318100 -88186453 - AluSq/x SINE Alu -195 118 2 226 292 71 0 chr17 1318215 1318328 -88186225 + L1MC5 LINE L1 7299 7419 -542 1679 83 8 12 chr17 1318356 1318596 -88185957 + AluY SINE Alu 60 298 -13 2371 90 3 0 chr17 1318673 1318985 -88185568 + AluSp SINE Alu 1 313 0 1044 95 0 0 chr17 1319001 1319138 -88185415 + AluSq/x SINE Alu 1 137 -176 2104 121 0 3 chr17 1319138 1319436 -88185117 + AluSx SINE Alu 1 297 -15 328 319 55 61 chr17 1319440 1319603 -88184950 + L1 LINE L1 4006 4167 -1979 2413 38 10 0 chr17 1319607 1319900 -88184653 + AluY SINE Alu 1 296 -15 1267 84 0 0 chr17 1319900 1320067 -88184486 + AluY SINE Alu 133 299 -12 320 290 18 129 chr17 1320067 1320131 -88184422 + L1 LINE L1 4270 4340 -1806 840 145 8 0 chr17 1320131 1320262 -88184291 + FLAM_C SINE Alu 1 132 -1 320 290 18 129 chr17 1320262 1320315 -88184238 + L1 LINE L1 4340 4397 -1749 2508 68 0 0 chr17 1320315 1320622 -88183931 + AluSx SINE Alu 1 307 -5 320 290 18 129 chr17 1320622 1320727 -88183826 + L1 LINE L1 4397 4468 -1678 2298 81 10 0 chr17 1320747 1321045 -88183508 + AluSx SINE Alu 1 301 -11 808 114 0 0 chr17 1321124 1321238 -88183315 + AluSq/x SINE Alu 1 114 -199 2265 93 3 7 chr17 1322256 1322566 -88181987 - AluY SINE Alu -2 309 1 2021 134 0 0 chr17 1322568 1322858 -88181695 - AluSx SINE Alu -22 290 1 312 302 0 6 chr17 1323133 1323302 -88181251 + C-rich Low_complexity Low_complexity 2 169 0 220 319 0 0 chr17 1323345 1323464 -88181089 + C-rich Low_complexity Low_complexity 3 121 0 331 307 0 6 chr17 1323488 1323664 -88180889 + C-rich Low_complexity Low_complexity 2 176 0 371 268 0 17 chr17 1323688 1324049 -88180504 + C-rich Low_complexity Low_complexity 1 354 0 253 311 149 70 chr17 1324183 1325093 -88179460 + L2 LINE L2 1812 2804 -510 2010 143 0 0 chr17 1325093 1325393 -88179160 - AluSx SINE Alu -12 300 1 253 311 149 70 chr17 1325393 1325447 -88179106 + L2 LINE L2 2804 2852 -462 272 331 13 76 chr17 1325466 1325536 -88179017 + MIR SINE MIR 113 186 -76 2533 97 8 53 chr17 1325536 1325703 -88178850 + THE1C LTR MaLR 1 174 -201 1759 125 0 0 chr17 1325703 1325959 -88178594 - AluSq SINE Alu -13 300 45 1866 95 0 0 chr17 1325960 1326203 -88178350 - AluSq SINE Alu -65 248 6 2533 97 8 53 chr17 1326203 1326426 -88178127 + THE1C LTR MaLR 173 375 0 272 331 13 76 chr17 1326426 1326512 -88178041 + MIR SINE MIR 186 259 -3 1657 94 17 0 chr17 1326744 1327014 -88177539 + AluSp SINE Alu 58 313 0 372 287 45 85 chr17 1327069 1327536 -88177017 + L2 LINE L2 2581 3059 -213 2213 93 10 0 chr17 1327803 1328103 -88176450 + AluY SINE Alu 1 303 -8 348 298 41 0 chr17 1328666 1328787 -88175766 + MIR SINE MIR 111 236 -26 214 175 0 0 chr17 1328788 1328828 -88175725 + (CAT)n Simple_repeat Simple_repeat 2 41 0 1525 118 14 0 chr17 1329264 1329485 -88175068 - AluSc SINE Alu -9 300 77 2153 102 7 0 chr17 1329487 1329781 -88174772 - AluSg SINE Alu -14 296 1 199 324 29 0 chr17 1330643 1330711 -88173842 + MIR3 SINE MIR 1 70 -138 2232 89 6 16 chr17 1330976 1331292 -88173261 - AluSq SINE Alu 0 313 1 2107 125 3 0 chr17 1331303 1331608 -88172945 - AluSx SINE Alu -6 306 1 1012 84 0 0 chr17 1331611 1331742 -88172811 - AluSq/x SINE Alu -181 131 1 189 316 26 13 chr17 1332167 1332243 -88172310 + MIR SINE MIR 20 96 -166 2233 109 0 3 chr17 1332390 1332703 -88171850 - AluSx SINE Alu 0 312 1 379 280 68 25 chr17 1332713 1332831 -88171722 - MLT1K LTR MaLR -263 325 203 216 0 0 0 chr17 1335248 1335272 -88169281 + (CA)n Simple_repeat Simple_repeat 2 25 0 309 308 2 2 chr17 1335906 1336014 -88168539 + MIR SINE MIR 58 148 -60 871 195 13 0 chr17 1336063 1336222 -88168331 + AluJb SINE Alu 72 232 -80 276 268 0 0 chr17 1336403 1336474 -88168079 + L2 LINE L2 3200 3270 -2 421 309 85 0 chr17 1336562 1336727 -88167826 - MIR SINE MIR -23 239 61 604 99 0 44 chr17 1336818 1336909 -88167644 + AluSq/x SINE Alu 22 108 -205 2222 76 17 7 chr17 1336973 1337274 -88167279 - AluSq SINE Alu -9 304 1 296 309 41 8 chr17 1337854 1337977 -88166576 + MIR3 SINE MIR 33 159 -49 586 250 22 67 chr17 1337983 1338038 -88166515 - MER5B DNA MER1_type -6 172 116 2036 111 17 3 chr17 1338038 1338326 -88166227 + AluSg SINE Alu 1 292 -18 586 250 22 67 chr17 1338326 1338450 -88166103 - MER5B DNA MER1_type -62 116 1 464 202 237 0 chr17 1338470 1338614 -88165939 + MER5A DNA MER1_type 4 180 -9 2264 72 0 0 chr17 1338636 1338901 -88165652 + AluSg SINE Alu 22 311 0 205 40 0 0 chr17 1338901 1338926 -88165627 + (GAAA)n Simple_repeat Simple_repeat 1 124 0 2146 109 7 23 chr17 1340241 1340544 -88164009 - AluSx SINE Alu -14 298 1 2207 102 3 29 chr17 1340908 1341223 -88163330 + AluSg SINE Alu 3 309 -1 385 133 0 0 chr17 1341224 1341284 -88163269 - HY3 scRNA scRNA -40 61 2 279 248 37 37 chr17 1341287 1341396 -88163157 - MLT1J LTR MaLR -294 217 109 1021 87 0 0 chr17 1341527 1341654 -88162899 + AluY SINE Alu 167 293 -18 253 343 0 0 chr17 1341668 1341735 -88162818 - L2 LINE L2 -1 3271 3205 190 298 18 0 chr17 1341826 1341883 -88162670 - L2 LINE L2 -252 3061 3004 2388 80 0 0 chr17 1342105 1342406 -88162147 + AluY SINE Alu 1 301 -10 1062 182 0 0 chr17 1342419 1342595 -88161958 + AluJb SINE Alu 137 312 0 309 279 23 0 chr17 1345360 1345446 -88159107 + MER103 DNA DNA 62 149 -17 2221 108 7 0 chr17 1345687 1345983 -88158570 - AluSx SINE Alu -11 301 4 2310 109 0 0 chr17 1347624 1347927 -88156626 - AluSg SINE Alu -7 303 1 2381 67 11 0 chr17 1348041 1348325 -88156228 - AluY SINE Alu -8 303 17 2503 69 0 0 chr17 1348873 1349163 -88155390 + AluSc SINE Alu 1 290 -19 309 281 49 0 chr17 1350075 1350157 -88154396 - L1ME4a LINE L1 -1 6120 6035 2441 81 0 0 chr17 1350170 1350468 -88154085 - AluSx SINE Alu -14 298 1 2209 110 0 3 chr17 1350815 1351116 -88153437 + AluSx SINE Alu 1 300 -12 2239 106 0 0 chr17 1351137 1351421 -88153132 + AluSg SINE Alu 1 284 -26 249 196 0 0 chr17 1351421 1351472 -88153081 + (CATATA)n Simple_repeat Simple_repeat 5 55 0 237 259 47 0 chr17 1351474 1351559 -88152994 + L1MC4 LINE L1 6614 6702 -1340 285 244 77 0 chr17 1351562 1351640 -88152913 + (TACG)n Simple_repeat Simple_repeat 4 87 0 265 322 0 0 chr17 1351640 1351730 -88152823 - L1MC4 LINE L1 -1339 6703 6614 343 177 21 104 chr17 1351730 1351826 -88152727 + L1MC4 LINE L1 6616 6703 -1339 333 337 11 0 chr17 1351799 1351894 -88152659 - L1MC4 LINE L1 -1340 6702 6607 * 357 24 0 0 chr17 1354182 1354224 -88150329 + (TG)n Simple_repeat Simple_repeat 1 42 0 441 36 0 0 chr17 1354322 1354377 -88150176 + (CAGCC)n Simple_repeat Simple_repeat 4 58 0 1582 161 0 0 chr17 1355097 1355339 -88149214 + AluJb SINE Alu 1 242 -70 1979 116 18 11 chr17 1355403 1355678 -88148875 + AluSx SINE Alu 1 277 -35 236 30 30 0 chr17 1355684 1355717 -88148836 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2299 120 3 0 chr17 1355786 1356094 -88148459 + AluSg SINE Alu 1 309 -1 1113 160 53 50 chr17 1356379 1356660 -88147893 + MER33 DNA MER1_type 1 282 -42 1441 86 0 0 chr17 1356662 1356836 -88147717 - AluSc SINE Alu -21 288 115 2491 81 0 0 chr17 1357307 1357617 -88146936 - AluSx SINE Alu -2 310 1 210 71 0 0 chr17 1358041 1358069 -88146484 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 2153 79 0 7 chr17 1358069 1358349 -88146204 - AluSg SINE Alu -32 278 1 1975 130 40 13 chr17 1359036 1359337 -88145216 - AluJb SINE Alu -3 309 1 323 243 37 28 chr17 1359337 1359388 -88145165 - Tigger8 DNA MER2_type -418 248 199 1876 101 4 26 chr17 1359388 1359656 -88144897 + AluSg SINE Alu 43 304 -6 323 243 37 28 chr17 1359656 1359711 -88144842 - Tigger8 DNA MER2_type -467 199 141 227 257 102 112 chr17 1359727 1359933 -88144620 + MIR SINE MIR 3 206 -56 1749 136 117 0 chr17 1360103 1360420 -88144133 + MER51B LTR ERV1 1 354 -23 2230 111 3 0 chr17 1360420 1360717 -88143836 + AluSq SINE Alu 1 298 -15 1150 120 14 14 chr17 1360717 1360925 -88143628 + L1P5 LINE L1 5322 5529 -622 2208 111 6 16 chr17 1360925 1361240 -88143313 + AluSx SINE Alu 1 312 0 955 84 8 0 chr17 1361241 1361360 -88143193 + AluSg/x SINE Alu 73 192 -118 1779 158 10 42 chr17 1361418 1361728 -88142825 + AluJb SINE Alu 1 300 -12 198 0 0 0 chr17 1361729 1361751 -88142802 + (CA)n Simple_repeat Simple_repeat 1 22 0 698 247 93 53 chr17 1361753 1362121 -88142432 + L1ME3A LINE L1 4118 4503 -1643 2548 65 0 0 chr17 1362121 1362431 -88142122 + AluY SINE Alu 1 310 -1 1442 244 56 11 chr17 1362431 1362877 -88141676 + L1ME LINE L1 5358 5823 -343 635 75 0 0 chr17 1362909 1362989 -88141564 + AluY SINE Alu 216 295 -16 507 192 96 81 chr17 1362989 1363187 -88141366 + L1ME3A LINE L1 4553 4753 -1393 257 293 120 7 chr17 1363225 1363375 -88141178 + L1ME3A LINE L1 4906 5072 -1074 2534 73 3 0 chr17 1363375 1363676 -88140877 + AluSq SINE Alu 1 302 -11 1260 98 0 0 chr17 1363676 1363839 -88140714 + AluSg/x SINE Alu 132 294 -16 599 270 82 28 chr17 1363841 1364239 -88140314 + L1ME3A LINE L1 5063 5478 -700 1362 188 0 103 chr17 1364258 1364453 -88140100 + AluJo SINE Alu 12 163 -149 2143 70 10 34 chr17 1364453 1364751 -88139802 + AluSq SINE Alu 11 301 -12 1362 188 0 103 chr17 1364751 1364875 -88139678 + AluJo SINE Alu 163 298 -14 892 246 147 22 chr17 1364887 1365482 -88139071 + L1ME3A LINE L1 5495 6166 -4 2051 140 7 0 chr17 1365520 1365820 -88138733 + AluJb SINE Alu 1 302 -10 2557 66 0 0 chr17 1366350 1366654 -88137899 + AluY SINE Alu 1 304 -7 223 282 59 35 chr17 1366784 1366869 -88137684 + MIR SINE MIR 56 142 -120 2532 43 0 7 chr17 1366976 1367275 -88137278 - AluY SINE Alu -14 297 1 203 371 57 19 chr17 1367343 1367448 -88137105 - L3 LINE CR1 -1222 355 247 2072 90 6 56 chr17 1368028 1368351 -88136202 - AluSq SINE Alu -6 307 1 2400 77 7 0 chr17 1368372 1368670 -88135883 - AluY SINE Alu -11 300 1 185 174 0 22 chr17 1369911 1369957 -88134596 + G-rich Low_complexity Low_complexity 5 49 0 21 0 0 0 chr17 1370492 1370513 -88134040 + AT_rich Low_complexity Low_complexity 1 21 0 674 148 85 170 chr17 1371862 1371912 -88132641 + AluJo SINE Alu 86 139 -173 2182 121 0 16 chr17 1371912 1372225 -88132328 + AluY SINE Alu 2 309 -2 674 148 85 170 chr17 1372225 1372252 -88132301 + AluJo SINE Alu 139 167 -145 2183 77 23 40 chr17 1372252 1372552 -88132001 + AluY SINE Alu 1 295 -16 674 148 85 170 chr17 1372552 1372696 -88131857 + AluJo SINE Alu 167 289 -23 366 291 26 8 chr17 1373803 1373920 -88130633 - FLAM_A SINE Alu -7 126 8 2332 94 0 10 chr17 1373950 1374257 -88130296 + AluY SINE Alu 1 304 -7 1900 140 3 3 chr17 1374269 1374555 -88129998 + AluY SINE Alu 1 286 -25 2443 57 3 7 chr17 1374826 1375122 -88129431 - AluY SINE Alu -16 295 1 658 171 54 31 chr17 1375126 1375255 -88129298 - AluSq/x SINE Alu -180 133 2 603 93 23 0 chr17 1375566 1375652 -88128901 + AluY SINE Alu 16 103 -208 1982 130 0 23 chr17 1375886 1376185 -88128368 + AluSx SINE Alu 1 292 -20 28 0 0 0 chr17 1376718 1376746 -88127807 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr17 1377416 1377442 -88127111 + AT_rich Low_complexity Low_complexity 1 26 0 215 139 83 0 chr17 1377829 1377865 -88126688 - MIR SINE MIR -183 79 41 243 359 0 0 chr17 1377865 1377929 -88126624 - MIR SINE MIR -185 77 14 208 275 107 124 chr17 1378636 1378660 -88125893 + MIR3 SINE MIR 28 51 -157 2186 102 3 13 chr17 1378660 1378964 -88125589 - AluSq SINE Alu -5 308 8 208 275 107 124 chr17 1378964 1379172 -88125381 + MIR3 SINE MIR 51 204 -4 673 264 24 0 chr17 1379303 1379470 -88125083 - MER20 DNA MER1_type -48 171 1 2458 61 0 7 chr17 1379636 1379932 -88124621 - AluY SINE Alu -17 294 1 811 188 137 21 chr17 1379980 1380214 -88124339 - Tigger7 DNA MER2_type 0 2491 2231 429 165 89 13 chr17 1381239 1381318 -88123235 + AluJ/FLAM SINE Alu 2 86 -226 2046 127 16 13 chr17 1381342 1381650 -88122903 + AluSc SINE Alu 1 309 0 1804 169 24 0 chr17 1381664 1381960 -88122593 + AluSx SINE Alu 1 303 -9 2379 107 3 0 chr17 1382067 1382376 -88122177 + AluSx SINE Alu 1 310 -2 677 252 83 12 chr17 1382473 1382727 -88121826 + L1ME1 LINE L1 5554 5825 -341 1502 199 62 7 chr17 1382733 1382950 -88121603 + AluJo SINE Alu 7 243 -69 309 119 194 0 chr17 1382950 1383017 -88121536 - MADE1 DNA Mariner 0 80 1 1502 199 62 7 chr17 1383017 1383071 -88121482 + AluJo SINE Alu 243 293 -19 495 283 69 0 chr17 1383087 1383306 -88121247 + L1ME1 LINE L1 5813 6056 -115 2234 101 0 39 chr17 1383379 1383511 -88121042 + AluSx SINE Alu 5 141 -171 2186 99 43 7 chr17 1383511 1383813 -88120740 + AluSp SINE Alu 1 313 0 2234 101 0 39 chr17 1383813 1383988 -88120565 + AluSx SINE Alu 141 300 -12 312 247 104 52 chr17 1384282 1384436 -88120117 + L1ME4a LINE L1 5959 6120 -1 859 167 44 56 chr17 1384564 1384627 -88119926 - L1MB8 LINE L1 -5 6173 6111 1990 122 24 0 chr17 1384627 1384915 -88119638 + AluSg SINE Alu 1 295 -15 859 167 44 56 chr17 1384915 1385102 -88119451 - L1MB8 LINE L1 -67 6111 5926 1247 121 56 5 chr17 1385106 1385321 -88119232 - Tigger1 DNA MER2_type 0 2418 2193 1728 202 0 10 chr17 1385739 1386041 -88118512 - AluJb SINE Alu -13 299 1 2554 72 0 0 chr17 1386297 1386602 -88117951 - AluY SINE Alu -6 305 1 2280 109 3 3 chr17 1386613 1386916 -88117637 - AluSp SINE Alu -10 303 1 230 263 97 26 chr17 1388190 1388304 -88116249 - MER94 DNA DNA 0 134 13 722 157 75 41 chr17 1388468 1388615 -88115938 + AluJo SINE Alu 2 153 -159 987 218 12 68 chr17 1388624 1388708 -88115845 + AluJb SINE Alu 51 138 -174 1371 201 115 0 chr17 1388708 1388987 -88115566 + AluJb SINE Alu 2 312 0 987 218 12 68 chr17 1388987 1389154 -88115399 + AluJb SINE Alu 138 288 -24 2221 128 0 0 chr17 1389340 1389637 -88114916 + AluSq SINE Alu 1 297 -16 1015 129 6 35 chr17 1389693 1389864 -88114689 + AluJb SINE Alu 1 166 -146 286 151 0 0 chr17 1389865 1389947 -88114606 + Alu SINE Alu 244 280 -20 886 168 0 0 chr17 1389977 1390120 -88114433 + AluJb SINE Alu 167 309 -3 1907 138 3 10 chr17 1390208 1390504 -88114049 - AluSx SINE Alu -18 294 1 238 362 51 29 chr17 1390858 1390996 -88113557 + MIR3 SINE MIR 7 147 -61 1299 155 92 67 chr17 1391102 1391386 -88113167 + AluJo SINE Alu 1 291 -21 2130 129 7 0 chr17 1391456 1391758 -88112795 + AluSx SINE Alu 1 304 -8 1123 89 0 0 chr17 1391882 1392017 -88112536 + AluSq/x SINE Alu 1 135 -178 2103 96 0 4 chr17 1392017 1392287 -88112266 + AluSx SINE Alu 1 269 -43 2309 80 3 3 chr17 1392611 1392899 -88111654 + AluSq SINE Alu 4 291 -22 2060 114 3 17 chr17 1392909 1393208 -88111345 + AluSx SINE Alu 1 295 -17 2104 73 15 0 chr17 1393433 1393694 -88110859 - AluSp SINE Alu -48 265 1 1855 120 84 4 chr17 1393696 1393971 -88110582 - AluSx SINE Alu -15 297 1 2119 95 20 3 chr17 1397378 1397674 -88106879 - AluSq SINE Alu 0 313 13 835 130 0 0 chr17 1397690 1397805 -88106748 + AluJb SINE Alu 178 292 -20 444 214 58 19 chr17 1397818 1397921 -88106632 - FLAM_A SINE Alu -32 110 4 11890 37 5 31 chr17 1398223 1399642 -88104911 - SVA Other Other 0 1386 5 2261 110 10 0 chr17 1399643 1399943 -88104610 - AluSx SINE Alu -9 303 1 2273 116 0 0 chr17 1400180 1400482 -88104071 + AluSg SINE Alu 1 302 -8 403 286 91 15 chr17 1400482 1400681 -88103872 - L2 LINE L2 -1325 1989 1776 1715 106 0 30 chr17 1401366 1401495 -88103058 + AluSx SINE Alu 3 123 -189 2228 114 0 19 chr17 1401495 1401811 -88102742 + AluSg SINE Alu 1 310 0 1715 106 0 30 chr17 1401811 1401917 -88102636 + AluSx SINE Alu 123 231 -81 1070 77 0 0 chr17 1401917 1402047 -88102506 + AluSg/x SINE Alu 169 298 -12 1681 161 16 39 chr17 1402098 1402409 -88102144 + AluJo SINE Alu 7 310 -2 1531 199 21 3 chr17 1402437 1402719 -88101834 + AluJo SINE Alu 11 297 -15 2143 117 3 0 chr17 1402719 1403010 -88101543 + AluSg SINE Alu 1 292 -18 601 146 68 0 chr17 1403164 1403267 -88101286 - AluSq/x SINE Alu -202 111 2 230 324 178 14 chr17 1403793 1403972 -88100581 - MIR SINE MIR -10 252 31 2189 91 52 0 chr17 1403972 1404259 -88100294 + AluSx SINE Alu 1 302 -10 230 324 178 14 chr17 1404259 1404292 -88100261 - MIR SINE MIR -231 31 5 1642 178 4 7 chr17 1404878 1405153 -88099400 - AluJb SINE Alu -23 289 16 2227 108 3 16 chr17 1405402 1405708 -88098845 - AluSq SINE Alu -11 302 1 2515 68 0 0 chr17 1406312 1406604 -88097949 - AluSq SINE Alu -21 292 1 998 133 0 26 chr17 1406746 1406897 -88097656 - FRAM SINE Alu -19 157 11 321 309 138 0 chr17 1407031 1407154 -88097399 + MIR SINE MIR 8 147 -115 1926 144 46 0 chr17 1407157 1407442 -88097111 + AluSx SINE Alu 1 298 -14 583 139 0 10 chr17 1407772 1407873 -88096680 + FLAM_A SINE Alu 35 134 -8 423 142 9 26 chr17 1407942 1408055 -88096498 + CT-rich Low_complexity Low_complexity 1 111 0 535 259 119 16 chr17 1408233 1408418 -88096135 + MIR SINE MIR 21 224 -38 921 149 0 50 chr17 1409292 1409453 -88095100 + FAM SINE Alu 10 162 -23 2290 212 73 10 chr17 1409561 1410036 -88094517 + L1MB8 LINE L1 5270 5792 -386 1991 107 27 23 chr17 1410036 1410335 -88094218 - AluSx SINE Alu -12 300 1 2290 212 73 10 chr17 1410335 1410463 -88094090 + L1MB8 LINE L1 5792 5911 -267 6153 158 47 37 chr17 1410524 1410686 -88093867 + Tigger1 DNA MER2_type 20 179 -2239 2371 76 0 13 chr17 1410686 1410988 -88093565 - AluY SINE Alu -13 298 1 6153 158 47 37 chr17 1410988 1411109 -88093444 + Tigger1 DNA MER2_type 179 297 -2121 2238 93 7 7 chr17 1411109 1411410 -88093143 - AluSp SINE Alu -12 301 1 6153 158 47 37 chr17 1411410 1411429 -88093124 + Tigger1 DNA MER2_type 297 314 -2104 1771 121 70 4 chr17 1411429 1411686 -88092867 - AluJb SINE Alu -24 288 15 6153 158 47 37 chr17 1411686 1412233 -88092320 + Tigger1 DNA MER2_type 314 891 -1527 2237 101 7 10 chr17 1412233 1412531 -88092022 + AluSg SINE Alu 1 297 -13 6153 158 47 37 chr17 1412531 1412984 -88091569 + Tigger1 DNA MER2_type 891 1338 -1080 1591 189 7 7 chr17 1412986 1413256 -88091297 + AluJb SINE Alu 1 270 -42 262 250 98 0 chr17 1413408 1413500 -88091053 - LTR67 LTR ERVL -7 550 450 2197 95 7 7 chr17 1413510 1413805 -88090748 + AluSx SINE Alu 5 299 -13 1227 85 0 0 chr17 1414142 1414295 -88090258 + AluSg/x SINE Alu 147 299 -11 2074 122 3 3 chr17 1414902 1415196 -88089357 + AluSx SINE Alu 1 294 -18 39 0 0 0 chr17 1415522 1415561 -88088992 + GC_rich Low_complexity Low_complexity 1 39 0 2398 63 6 22 chr17 1415804 1416120 -88088433 - AluSx SINE Alu -1 311 1 2253 96 6 13 chr17 1416921 1417235 -88087318 - AluSx SINE Alu 0 312 1 21 36 0 0 chr17 1418050 1418078 -88086475 + GC_rich Low_complexity Low_complexity 1 28 0 2334 89 6 19 chr17 1420322 1420638 -88083915 + AluSx SINE Alu 1 312 0 663 263 29 15 chr17 1420752 1420957 -88083596 + MIR SINE MIR 52 259 -3 1568 131 26 4 chr17 1421504 1421733 -88082820 - AluJb SINE Alu -78 234 1 2561 49 19 7 chr17 1421754 1422061 -88082492 - AluY SINE Alu 0 311 1 1463 109 0 19 chr17 1422112 1422323 -88082230 + AluSg/x SINE Alu 88 294 -18 410 177 8 0 chr17 1422509 1422633 -88081920 + (TG)n Simple_repeat Simple_repeat 1 125 0 303 140 35 0 chr17 1422811 1422868 -88081685 - AluS SINE Alu -227 74 16 1604 151 60 43 chr17 1423178 1423312 -88081241 + AluSx SINE Alu 1 131 -181 2275 81 0 3 chr17 1423312 1423597 -88080956 + AluY SINE Alu 1 284 -27 405 0 0 0 chr17 1423597 1423642 -88080911 + (CA)n Simple_repeat Simple_repeat 2 46 0 1604 151 60 43 chr17 1423642 1423805 -88080748 + AluSx SINE Alu 130 304 -8 1123 126 0 63 chr17 1424102 1424277 -88080276 + AluSx SINE Alu 1 164 -148 2273 94 7 10 chr17 1424413 1424547 -88080006 + AluY SINE Alu 1 134 -177 2783 32 0 0 chr17 1424547 1424856 -88079697 + AluY SINE Alu 1 309 -2 2273 94 7 10 chr17 1424856 1425028 -88079525 + AluY SINE Alu 134 306 -5 2105 122 0 28 chr17 1425069 1425390 -88079163 + AluSx SINE Alu 1 312 0 318 254 101 0 chr17 1425394 1425532 -88079021 + L1 LINE L1 5181 5332 -814 822 187 0 0 chr17 1425532 1425671 -88078882 + FLAM_C SINE Alu 1 139 -4 671 166 37 18 chr17 1625671 1625834 -87878719 + L1MB3 LINE L1 5976 6141 -42 2271 82 0 0 chr17 1625835 1626129 -87878424 + AluSx SINE Alu 1 294 -18 775 157 0 0 chr17 1626162 1626283 -87878270 - FRAM SINE Alu -14 162 42 789 174 8 8 chr17 1626336 1626468 -87878085 + FLAM_C SINE Alu 2 133 -10 2167 100 0 7 chr17 1626474 1626774 -87877779 + AluSg SINE Alu 3 300 -10 1241 159 4 41 chr17 1627038 1627308 -87877245 - AluSq SINE Alu -53 260 1 1679 164 20 7 chr17 1627522 1627827 -87876726 - AluJo SINE Alu -3 309 1 657 158 0 0 chr17 1627990 1628091 -87876462 + AluJ/FLAM SINE Alu 2 102 -210 809 131 0 8 chr17 1628295 1628425 -87876128 + AluSp/q SINE Alu 168 296 -17 954 150 131 77 chr17 1628425 1628567 -87875986 - AluJo SINE Alu -20 292 159 2059 115 0 10 chr17 1628567 1628880 -87875673 - AluSg SINE Alu 0 310 1 954 150 131 77 chr17 1628880 1628997 -87875556 - AluJo SINE Alu -153 159 19 339 252 36 29 chr17 1629130 1629269 -87875284 - L1M4 LINE L1 -985 5161 5022 895 97 15 15 chr17 1629269 1629403 -87875150 + AluSq/x SINE Alu 1 134 -179 1988 99 3 66 chr17 1629455 1629788 -87874765 - AluSx SINE Alu 0 312 1 232 301 54 0 chr17 1629887 1629980 -87874573 + L1MC4a LINE L1 6080 6177 -1631 486 154 240 29 chr17 1630010 1630114 -87874439 + AluJb SINE Alu 2 127 -185 2032 108 0 7 chr17 1630241 1630538 -87874015 - AluSx SINE Alu -17 295 1 932 67 7 22 chr17 1630541 1630676 -87873877 - AluSq/x SINE Alu -180 133 1 372 281 221 15 chr17 1630683 1631014 -87873539 + L2 LINE L2 1693 2091 -1223 2155 80 0 13 chr17 1631075 1631376 -87873177 - AluSc SINE Alu -12 297 1 783 176 5 93 chr17 1631475 1631626 -87872927 + AluJb SINE Alu 137 269 -43 2277 68 7 3 chr17 1631626 1631934 -87872619 + AluY SINE Alu 1 309 -2 783 176 5 93 chr17 1631934 1631975 -87872578 + AluJb SINE Alu 269 312 0 496 291 104 33 chr17 1632189 1632494 -87872059 + L2 LINE L2 2736 3061 -211 2234 88 3 3 chr17 1632558 1632864 -87871689 - AluSg SINE Alu -4 306 1 398 286 24 52 chr17 1633070 1633280 -87871273 - L2 LINE L2 -211 3061 2858 2353 67 3 0 chr17 1633609 1633907 -87870646 + AluSx SINE Alu 1 299 -13 296 292 18 44 chr17 1633912 1634025 -87870528 + L2 LINE L2 3163 3272 0 2128 105 0 7 chr17 1634136 1634441 -87870112 - AluY SINE Alu -8 303 1 715 183 0 30 chr17 1634728 1634859 -87869694 - FLAM_C SINE Alu -15 128 2 259 318 67 72 chr17 1634953 1635148 -87869405 + L2 LINE L2 3001 3194 -78 1070 136 28 0 chr17 1635152 1635329 -87869224 - AluSg/x SINE Alu 0 310 129 1996 116 0 7 chr17 1635334 1635650 -87868903 - AluSx SINE Alu 0 314 1 241 95 71 0 chr17 1635862 1635904 -87868649 + L2 LINE L2 3264 3308 -5 2178 100 6 3 chr17 1635981 1636292 -87868261 - AluSq SINE Alu -1 312 1 235 270 50 0 chr17 1636300 1636400 -87868153 - L1P LINE L1 -781 5370 5266 442 179 0 13 chr17 1636559 1636637 -87867916 - FLAM_A SINE Alu -17 125 49 1758 159 37 7 chr17 1636702 1636997 -87867556 + AluJb SINE Alu 1 304 -8 248 268 0 18 chr17 1637012 1637068 -87867485 + AluSg/x SINE Alu 124 178 -122 327 167 95 36 chr17 1637137 1637221 -87867332 - L1MA9 LINE L1 0 6312 6224 2136 105 39 60 chr17 1637369 1637588 -87866965 - THE1C LTR MaLR -2 373 164 1912 137 0 19 chr17 1637588 1637903 -87866650 + AluSx SINE Alu 3 311 -1 2136 105 39 60 chr17 1637903 1638064 -87866489 - THE1C LTR MaLR -211 164 1 2080 113 0 0 chr17 1638159 1638451 -87866102 - AluSx SINE Alu -20 292 1 699 281 186 30 chr17 1638474 1638872 -87865681 - MLT1K LTR MaLR -10 578 119 791 271 42 42 chr17 1639018 1639093 -87865460 - L1M4 LINE L1 -1440 4706 4632 2186 63 0 78 chr17 1639093 1639427 -87865126 - AluY SINE Alu -3 308 1 791 271 42 42 chr17 1639427 1639728 -87864825 - L1M4 LINE L1 -1513 4633 4330 1124 107 0 34 chr17 1639751 1639928 -87864625 + AluSq SINE Alu 1 171 -142 892 239 83 73 chr17 1640108 1640267 -87864286 - HAL1 LINE L1 -5 2502 2346 1726 131 0 64 chr17 1640267 1640581 -87863972 - AluSx SINE Alu -18 294 1 2002 117 0 13 chr17 1640581 1640879 -87863674 - AluSx SINE Alu -18 294 1 892 239 83 73 chr17 1640879 1640990 -87863563 - HAL1 LINE L1 -161 2346 2238 1946 127 3 7 chr17 1640990 1641298 -87863255 - AluSp SINE Alu -6 307 1 892 239 83 73 chr17 1641298 1641544 -87863009 - HAL1 LINE L1 -269 2238 1979 1419 269 56 87 chr17 1641922 1641993 -87862560 + L1MC4 LINE L1 6875 6947 -1095 1553 165 3 32 chr17 1641993 1642302 -87862251 + AluJo SINE Alu 1 300 -12 1419 269 56 87 chr17 1642302 1642455 -87862098 + L1MC4 LINE L1 6947 7103 -939 2025 125 0 3 chr17 1642455 1642752 -87861801 + AluSx SINE Alu 1 296 -16 1419 269 56 87 chr17 1642752 1643166 -87861387 + L1MC4 LINE L1 7103 7529 -513 2152 106 0 0 chr17 1643166 1643469 -87861084 - AluSx SINE Alu -9 303 1 1419 269 56 87 chr17 1643469 1643596 -87860957 + L1MC4 LINE L1 7529 7658 -384 1400 143 68 34 chr17 1643596 1643889 -87860664 + AluJo SINE Alu 1 303 -9 1419 269 56 87 chr17 1643889 1644198 -87860355 + L1MC4 LINE L1 7658 7918 -124 311 224 247 52 chr17 1644198 1644372 -87860181 + LTR50 LTR ERVL 1 208 -587 856 170 78 61 chr17 1644387 1644481 -87860072 + L1M4 LINE L1 4934 5025 -1121 2185 60 23 10 chr17 1644481 1644780 -87859773 - AluY SINE Alu -8 303 1 856 170 78 61 chr17 1644780 1644915 -87859638 + L1M4 LINE L1 5025 5167 -979 1651 116 27 37 chr17 1644916 1645210 -87859343 + AluJb SINE Alu 1 291 -21 906 68 0 23 chr17 1645218 1645351 -87859202 + AluSq/x SINE Alu 1 130 -182 2230 97 7 0 chr17 1645478 1645787 -87858766 + AluY SINE Alu 1 311 0 2247 74 3 7 chr17 1645803 1646113 -87858440 + AluY SINE Alu 1 309 -2 432 0 0 0 chr17 1646444 1646492 -87858061 + (TA)n Simple_repeat Simple_repeat 2 49 0 387 133 0 112 chr17 1646494 1646592 -87857961 - LTR9 LTR ERV1 -90 522 436 2114 74 10 10 chr17 1646592 1646889 -87857664 - AluY SINE Alu -14 297 1 477 240 4 28 chr17 1646897 1647036 -87857517 + L1MD2 LINE L1 6235 7983 -12 1593 168 13 35 chr17 1647351 1647526 -87857027 - AluJo SINE Alu -9 303 137 2110 93 0 60 chr17 1647526 1647859 -87856694 - AluSp SINE Alu 0 313 1 1593 168 13 35 chr17 1647859 1647993 -87856560 - AluJo SINE Alu -175 137 1 246 32 0 0 chr17 1647996 1648027 -87856526 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 641 188 0 0 chr17 1648041 1648142 -87856411 - AluJ/FLAM SINE Alu -210 102 2 289 113 31 216 chr17 1648144 1648241 -87856312 - AluJo SINE Alu -159 143 65 854 107 0 0 chr17 1648256 1648378 -87856175 + AluSg/x SINE Alu 176 297 -15 406 93 0 0 chr17 1648379 1648433 -87856120 + Alu SINE Alu 2 55 -256 1897 97 3 58 chr17 1649720 1650030 -87854523 - AluY SINE Alu -18 293 1 2262 50 0 31 chr17 1650084 1650405 -87854148 + AluY SINE Alu 1 311 0 1832 140 0 37 chr17 1650420 1650741 -87853812 + AluSx SINE Alu 1 309 -3 351 267 168 31 chr17 1651158 1651319 -87853234 + MLT1K LTR MaLR 315 497 -91 795 163 0 8 chr17 1651327 1651456 -87853097 - FLAM_C SINE Alu -5 128 1 1384 171 36 26 chr17 1653027 1653331 -87851222 + AluJo SINE Alu 1 307 -5 1919 101 14 20 chr17 1653417 1653714 -87850839 + AluY SINE Alu 1 295 -16 1892 119 10 13 chr17 1654068 1654370 -87850183 + AluSx SINE Alu 1 301 -11 2252 97 0 3 chr17 1654449 1654760 -87849793 + AluSx SINE Alu 1 310 -2 1743 112 4 14 chr17 1655494 1655770 -87848783 - AluSg SINE Alu -7 303 31 1903 42 36 46 chr17 1655831 1656137 -87848416 + AluY SINE Alu 2 304 -7 377 210 49 0 chr17 1656607 1656688 -87847865 + L1ME LINE L1 5529 5613 -508 1011 139 0 18 chr17 1656741 1656906 -87847647 + FRAM SINE Alu 1 162 -4 2231 57 10 14 chr17 1657047 1657343 -87847210 - AluY SINE Alu -16 295 1 1629 151 21 0 chr17 1657371 1657662 -87846891 + AluSg SINE Alu 1 297 -13 423 227 62 39 chr17 1657793 1657921 -87846632 - L1MB7 LINE L1 -10 6174 6044 1362 172 50 17 chr17 1657930 1658227 -87846326 - AluJb SINE Alu -5 307 1 243 259 82 12 chr17 1658341 1658426 -87846127 - MLT1H LTR MaLR -50 499 409 973 230 65 21 chr17 1658458 1658749 -87845804 - MLT1H LTR MaLR -245 304 1 1166 114 12 0 chr17 1658844 1659010 -87845543 - AluSq SINE Alu -19 294 127 831 112 0 0 chr17 1659011 1659136 -87845417 + (TA)n Simple_repeat Simple_repeat 1 125 0 2265 78 0 34 chr17 1659136 1659458 -87845095 - AluY SINE Alu 0 311 1 288 293 99 26 chr17 1659787 1659978 -87844575 - L1M4 LINE L1 -1466 4680 4476 294 352 7 7 chr17 1659982 1660124 -87844429 - L1M4 LINE L1 -2313 3833 3692 483 91 0 0 chr17 1660239 1660305 -87844248 - FLAM SINE Alu -32 111 46 208 62 0 31 chr17 1660305 1660337 -87844216 + (TCTG)n Simple_repeat Simple_repeat 1 31 0 276 77 0 0 chr17 1660363 1660402 -87844151 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 307 167 0 0 chr17 1660403 1660451 -87844102 - AluS SINE Alu -26 274 227 357 62 0 0 chr17 1660451 1660499 -87844054 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 1821 117 0 18 chr17 1660500 1660781 -87843772 - AluSx SINE Alu -36 276 1 225 0 0 0 chr17 1660787 1660812 -87843741 + (T)n Simple_repeat Simple_repeat 1 25 0 388 231 51 8 chr17 1660905 1661022 -87843531 - L1ME4a LINE L1 -45 6076 5955 1751 140 3 29 chr17 1661180 1661487 -87843066 - AluJo SINE Alu -12 300 2 2079 94 0 17 chr17 1661496 1661793 -87842760 - AluSc SINE Alu -17 292 1 2268 93 0 0 chr17 1662789 1663090 -87841463 + AluSx SINE Alu 1 301 -11 1393 139 154 23 chr17 1663209 1663475 -87841078 - AluJb SINE Alu -1 301 1 845 128 0 47 chr17 1663553 1663688 -87840865 + FLAM_C SINE Alu 1 130 -182 1928 144 10 7 chr17 1663688 1663994 -87840559 + AluSx SINE Alu 1 307 -5 845 128 0 47 chr17 1663994 1664007 -87840546 + FLAM_C SINE Alu 130 142 -170 2206 56 42 7 chr17 1664065 1664352 -87840201 + AluY SINE Alu 1 297 -14 259 282 24 12 chr17 1664367 1664452 -87840101 - MIR SINE MIR -80 182 97 1003 106 0 59 chr17 1664566 1664736 -87839817 - AluSc SINE Alu -148 161 2 2217 79 0 13 chr17 1666306 1666610 -87837943 - AluY SINE Alu -11 300 1 180 0 0 0 chr17 1666696 1666716 -87837837 + (A)n Simple_repeat Simple_repeat 1 20 0 232 156 0 0 chr17 1666866 1666911 -87837642 + Alu SINE Alu 256 300 0 711 262 59 0 chr17 1666924 1667111 -87837442 + MIR SINE MIR 65 262 0 1703 166 13 10 chr17 1667130 1667437 -87837116 + AluJo SINE Alu 5 312 0 1809 81 37 7 chr17 1667794 1668094 -87836459 + AluSg SINE Alu 1 308 0 1926 98 13 36 chr17 1668430 1668735 -87835818 - AluSq SINE Alu -15 298 1 1919 114 21 7 chr17 1668823 1669113 -87835440 - AluSc SINE Alu -15 294 1 1903 117 21 24 chr17 1669120 1669410 -87835143 - AluSx SINE Alu -23 289 1 312 225 42 108 chr17 1669670 1669790 -87834763 + MIR SINE MIR 15 126 -136 402 276 68 44 chr17 1669936 1670073 -87834480 + L1ME LINE L1 5307 5452 -669 1538 140 51 27 chr17 1670073 1670365 -87834188 + AluSx SINE Alu 1 299 -13 402 276 68 44 chr17 1670365 1670408 -87834145 + L1ME LINE L1 5452 5492 -629 1910 135 0 10 chr17 1670471 1670767 -87833786 + AluSx SINE Alu 1 293 -19 29 0 0 0 chr17 1670767 1670796 -87833757 + AT_rich Low_complexity Low_complexity 1 29 0 2022 45 0 11 chr17 1670867 1671131 -87833422 - AluY SINE Alu -12 299 39 1475 253 54 83 chr17 1671150 1671844 -87832709 + L1MC4a LINE L1 5011 5724 -430 2122 105 3 0 chr17 1671844 1672140 -87832413 - AluSx SINE Alu -15 297 1 1475 253 54 83 chr17 1672140 1672280 -87832273 + L1MC4a LINE L1 5724 5343 -811 1609 111 0 137 chr17 1672280 1672622 -87831931 - AluSx SINE Alu -7 295 1 1475 253 54 83 chr17 1672622 1672729 -87831824 + L1MC4a LINE L1 5342 5451 -703 1375 274 116 18 chr17 1672901 1673520 -87831033 + L1ME4a LINE L1 5445 6120 -1 788 154 15 8 chr17 1674008 1674138 -87830415 - FLAM_C SINE Alu -11 132 2 2378 52 0 7 chr17 1674317 1674638 -87829915 - AluSg SINE Alu 0 319 1 2195 61 29 0 chr17 1674646 1674926 -87829627 - AluY SINE Alu -23 288 1 909 116 0 0 chr17 1674939 1675060 -87829493 - FLAM_C SINE Alu -12 121 1 1028 137 25 6 chr17 1675284 1675445 -87829108 + AluSx SINE Alu 61 224 -88 1137 151 16 68 chr17 1675445 1675522 -87829031 - AluJo SINE Alu -73 239 160 4678 138 44 5 chr17 1675522 1676278 -87828275 + LTR1 LTR ERV1 1 785 0 1137 151 16 68 chr17 1676278 1676452 -87828101 - AluJo SINE Alu -152 160 1 1994 142 0 0 chr17 1676614 1676916 -87827637 + AluSx SINE Alu 1 302 -10 1372 144 0 25 chr17 1677271 1677507 -87827046 - AluJb SINE Alu -24 288 59 2138 111 7 3 chr17 1677514 1677821 -87826732 - AluSx SINE Alu -4 308 1 2036 128 0 0 chr17 1677919 1678215 -87826338 - AluSx SINE Alu -16 296 1 413 141 99 91 chr17 1678332 1678403 -87826150 + L1MC4 LINE L1 7921 7995 -47 1698 141 24 14 chr17 1678403 1678693 -87825860 - AluSx SINE Alu -19 293 1 413 141 99 91 chr17 1678693 1678742 -87825811 + L1MC4 LINE L1 7995 8042 0 382 219 109 17 chr17 1678881 1679000 -87825553 + L1M4 LINE L1 2784 2913 -3233 2194 101 0 13 chr17 1679231 1679547 -87825006 - AluSx SINE Alu 0 312 1 841 123 8 0 chr17 1679550 1679680 -87824873 - AluSq/x SINE Alu -182 131 1 1907 123 24 7 chr17 1681770 1682062 -87822491 + AluSq SINE Alu 1 297 -16 2327 93 0 3 chr17 1682705 1683016 -87821537 - AluSx SINE Alu -2 310 1 1284 157 31 100 chr17 1683016 1683180 -87821373 - AluSq SINE Alu -5 298 165 225 0 0 0 chr17 1683180 1683205 -87821348 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 1284 157 31 100 chr17 1683205 1683359 -87821194 - AluSq SINE Alu -138 165 2 1206 127 0 64 chr17 1683529 1683812 -87820741 - AluSq SINE Alu -11 302 38 194 318 14 99 chr17 1684178 1684401 -87820152 + L2 LINE L2 2858 3061 -211 539 303 134 70 chr17 1685243 1685774 -87818779 + L2 LINE L2 1616 2230 -1084 1702 103 0 26 chr17 1685774 1686047 -87818506 - AluSx SINE Alu -46 266 1 539 303 134 70 chr17 1686047 1686423 -87818130 + L2 LINE L2 2230 2581 -733 2327 70 0 3 chr17 1686587 1686885 -87817668 - AluY SINE Alu -14 297 1 1780 104 0 83 chr17 1686885 1687222 -87817331 - AluSx SINE Alu -3 309 1 2182 107 0 0 chr17 1687378 1687678 -87816875 - AluSx SINE Alu -12 300 1 532 273 116 12 chr17 1687683 1687855 -87816698 + MIR SINE MIR 71 260 -2 22 0 0 0 chr17 1687892 1687914 -87816639 + AT_rich Low_complexity Low_complexity 1 22 0 1808 119 0 14 chr17 1687915 1688221 -87816332 - AluSg SINE Alu 0 302 1 399 232 8 72 chr17 1688231 1688356 -87816197 + L2 LINE L2 3197 3313 0 1955 124 24 7 chr17 1688569 1688867 -87815686 + AluSp SINE Alu 1 303 -10 1930 122 14 0 chr17 1688898 1689192 -87815361 + AluSx SINE Alu 1 298 -14 916 137 0 0 chr17 1689224 1689355 -87815198 - FLAM_C SINE Alu -2 131 1 331 212 111 12 chr17 1689717 1689808 -87814745 - MIR SINE MIR -20 188 89 1533 163 46 14 chr17 1689873 1690156 -87814397 - AluSx SINE Alu -20 292 1 1375 166 3 62 chr17 1690160 1690468 -87814085 - AluJo SINE Alu -22 290 1 2165 104 24 6 chr17 1690468 1690805 -87813748 - HSMAR2 DNA Mariner -958 344 2 669 172 0 33 chr17 1690852 1690974 -87813579 + FLAM_C SINE Alu 1 118 -15 1765 129 22 7 chr17 1691122 1691423 -87813130 - AluSx SINE Alu 0 305 1 2373 201 50 56 chr17 1691424 1691681 -87812872 - L1ME2 LINE L1 -34 6130 5873 1462 163 13 60 chr17 1691681 1691855 -87812698 - AluJo SINE Alu -18 294 138 2172 91 0 7 chr17 1691855 1692153 -87812400 - AluSc SINE Alu -13 296 1 1462 163 13 60 chr17 1692153 1692278 -87812275 - AluJo SINE Alu -174 138 9 2373 201 50 56 chr17 1692278 1693028 -87811525 - L1ME2 LINE L1 -291 5873 5120 2191 93 6 3 chr17 1693028 1693340 -87811213 + AluSq SINE Alu 1 313 0 2203 94 3 0 chr17 1693346 1693645 -87810908 + AluSp SINE Alu 5 304 -9 2373 201 50 56 chr17 1693645 1693862 -87810691 - L1ME2 LINE L1 -1049 5115 4865 2191 72 0 35 chr17 1693862 1694181 -87810372 - AluY SINE Alu -3 308 1 2373 201 50 56 chr17 1694181 1694348 -87810205 - L1ME2 LINE L1 -1299 4865 4699 1204 141 9 18 chr17 1694371 1694598 -87809955 - AluSx SINE Alu -29 283 59 257 274 61 61 chr17 1694653 1694898 -87809655 - L1ME2 LINE L1 -1958 4188 3944 464 139 0 0 chr17 1695380 1695452 -87809101 + AluS SINE Alu 2 73 -240 1982 96 13 20 chr17 1695466 1695768 -87808785 - AluY SINE Alu -11 300 1 460 283 75 0 chr17 1695768 1695927 -87808626 - L1M4 LINE L1 -1270 4876 4706 2136 117 3 0 chr17 1695929 1696238 -87808315 - AluSx SINE Alu -2 310 1 756 164 14 29 chr17 1696248 1696388 -87808165 - FRAM SINE Alu -15 161 24 1681 153 11 0 chr17 1696401 1696676 -87807877 - AluJb SINE Alu -3 309 32 1507 171 21 7 chr17 1696750 1696912 -87807641 - AluJo SINE Alu -13 299 130 2027 107 0 0 chr17 1696912 1697193 -87807360 - AluY SINE Alu -22 289 9 1507 171 21 7 chr17 1697193 1697316 -87807237 - AluJo SINE Alu -182 130 10 2032 213 95 131 chr17 1697328 1697399 -87807154 - L1M4 LINE L1 -1679 4467 4395 1984 121 13 10 chr17 1697399 1697706 -87806847 + AluSx SINE Alu 1 308 -4 2032 213 95 131 chr17 1697706 1697916 -87806637 - L1M4 LINE L1 -1751 4395 4179 1988 119 20 3 chr17 1697916 1698219 -87806334 - AluSx SINE Alu -4 308 1 2032 213 95 131 chr17 1698219 1698655 -87805898 - L1M4 LINE L1 -1967 4179 3682 715 141 16 25 chr17 1698655 1698776 -87805777 - FLAM_C SINE Alu -15 128 9 2032 213 95 131 chr17 1698776 1699132 -87805421 - L1M4 LINE L1 -2464 3682 3315 203 313 167 0 chr17 1699881 1699977 -87804576 - MER5A DNA MER1_type -1 188 77 213 303 107 73 chr17 1700022 1700237 -87804316 + L2 LINE L2 3021 3246 -26 405 0 0 0 chr17 1700237 1700282 -87804271 + (TTA)n Simple_repeat Simple_repeat 2 46 0 213 303 107 73 chr17 1700282 1700300 -87804253 + L2 LINE L2 3246 3262 -10 820 133 0 30 chr17 1701604 1701739 -87802814 - AluSq/x SINE Alu -180 132 2 351 0 0 0 chr17 1701814 1701853 -87802700 + (TG)n Simple_repeat Simple_repeat 2 40 0 1355 190 3 33 chr17 1701916 1702221 -87802332 + AluJo SINE Alu 9 304 -8 1094 135 0 16 chr17 1702363 1702548 -87802005 + AluSq SINE Alu 54 235 -78 1440 191 3 24 chr17 1702654 1702952 -87801601 + AluJo SINE Alu 13 304 -8 1531 198 0 6 chr17 1703040 1703353 -87801200 + AluJb SINE Alu 1 311 -1 643 175 175 35 chr17 1703467 1703695 -87800858 - HAL1b LINE L1 -702 646 387 1805 105 16 35 chr17 1703705 1704020 -87800533 - AluY SINE Alu -2 309 1 1834 95 46 18 chr17 1705149 1705433 -87799120 + AluSg SINE Alu 1 292 -18 856 231 64 8 chr17 1705443 1705677 -87798876 + L1MB7 LINE L1 5937 6183 -1 1920 90 4 11 chr17 1705742 1706009 -87798544 + AluSx SINE Alu 1 265 -47 1817 118 0 8 chr17 1706017 1706279 -87798274 - AluSg1 SINE Alu -49 260 1 1341 221 47 9 chr17 1706281 1706598 -87797955 - L1M4 LINE L1 -362 5822 5494 2525 49 0 0 chr17 1706702 1707008 -87797545 - AluY SINE Alu -4 307 2 400 326 144 26 chr17 1707009 1707279 -87797274 - L1M4 LINE L1 -1955 4191 3890 2251 102 0 0 chr17 1707307 1707602 -87796951 + AluSx SINE Alu 1 295 -17 1898 114 3 23 chr17 1707668 1707967 -87796586 + AluSx SINE Alu 1 293 -19 2068 104 14 0 chr17 1708042 1708329 -87796224 + AluSx SINE Alu 11 301 -11 1347 197 71 94 chr17 1708353 1708961 -87795592 - L1MC5 LINE L1 -30 7931 7338 451 246 143 29 chr17 1708964 1709139 -87795414 - L1M4 LINE L1 -2364 3782 3588 280 314 133 54 chr17 1709567 1710009 -87794544 - L2 LINE L2 -10 3303 2827 1923 129 0 10 chr17 1710838 1711133 -87793420 + AluSx SINE Alu 7 298 -14 181 264 0 38 chr17 1711394 1711447 -87793106 + L2 LINE L2 3222 3272 0 1264 189 4 15 chr17 1711871 1712131 -87792422 + AluJo SINE Alu 16 272 -40 395 337 51 10 chr17 1712151 1712347 -87792206 + L1M4 LINE L1 5189 5392 -754 2244 233 33 75 chr17 1712364 1712615 -87791938 - L1MEc LINE L1 -2056 4159 3899 1654 115 39 0 chr17 1712615 1712775 -87791778 - AluSx SINE Alu -19 293 118 300 27 0 0 chr17 1712775 1712812 -87791741 + (TG)n Simple_repeat Simple_repeat 2 38 0 1654 115 39 0 chr17 1712812 1712911 -87791642 - AluSx SINE Alu -194 118 24 2244 233 33 75 chr17 1712911 1713420 -87791133 - L1MEc LINE L1 -2316 3899 3431 1322 161 106 25 chr17 1713487 1713761 -87790792 + AluJb SINE Alu 1 296 -16 1856 120 0 20 chr17 1713761 1714060 -87790493 + AluSg SINE Alu 1 294 -16 28 111 0 0 chr17 1714066 1714147 -87790406 + AT_rich Low_complexity Low_complexity 1 81 0 826 107 0 9 chr17 1714147 1714259 -87790294 - AluSq/x SINE Alu -179 133 23 1258 202 86 5 chr17 1714326 1714697 -87789856 - L1MEc LINE L1 -2907 3308 2908 234 91 0 0 chr17 1714698 1714731 -87789822 + (T)n Simple_repeat Simple_repeat 1 33 0 2009 124 0 13 chr17 1715922 1716220 -87788333 - AluSx SINE Alu -13 299 6 1904 209 54 14 chr17 1716222 1716324 -87788229 - L1MEc LINE L1 -3287 2928 2832 1919 136 0 3 chr17 1716324 1716666 -87787887 - AluSx SINE Alu 0 341 1 1904 209 54 14 chr17 1716666 1717078 -87787475 - L1MEc LINE L1 -3383 2832 2392 1363 177 0 61 chr17 1717079 1717263 -87787290 - AluJb SINE Alu -1 311 117 180 97 0 0 chr17 1717263 1717294 -87787259 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2027 89 4 4 chr17 1717294 1717565 -87786988 - AluSc SINE Alu -28 281 11 1363 177 0 61 chr17 1717565 1717689 -87786864 - AluJb SINE Alu -193 119 21 834 147 61 25 chr17 1717747 1717910 -87786643 - AluJo SINE Alu -142 170 2 2507 271 46 21 chr17 1717910 1718758 -87785795 - L1MEc LINE L1 -5241 1155 287 565 296 8 46 chr17 1718948 1719188 -87785365 - HAL1 LINE L1 -25 2482 2252 1595 132 26 58 chr17 1719201 1719367 -87785186 - AluJo SINE Alu -11 301 148 2081 80 30 13 chr17 1719367 1719669 -87784884 - AluY SINE Alu -4 307 1 1595 132 26 58 chr17 1719669 1719813 -87784740 - AluJo SINE Alu -164 148 1 1913 132 4 0 chr17 1719891 1720197 -87784356 - AluSx SINE Alu 0 307 1 2237 73 16 7 chr17 1720197 1720499 -87784054 - AluSq SINE Alu -7 306 1 1396 183 20 40 chr17 1720503 1720666 -87783887 - AluJb SINE Alu -10 302 137 387 0 0 0 chr17 1720666 1720709 -87783844 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 2162 77 3 3 chr17 1720709 1720994 -87783559 - AluSx SINE Alu -27 285 1 1396 183 20 40 chr17 1720994 1721129 -87783424 - AluJb SINE Alu -173 139 9 2134 105 0 10 chr17 1721738 1722042 -87782511 + AluSq SINE Alu 2 302 -11 1752 87 4 16 chr17 1722155 1722408 -87782145 + AluSx SINE Alu 55 304 -8 279 203 101 29 chr17 1722408 1722477 -87782076 + AluSc SINE Alu 132 205 -94 242 281 104 67 chr17 1722591 1722726 -87781827 - MIR3 SINE MIR -9 199 60 343 266 60 54 chr17 1723091 1723275 -87781278 - L1MC4a LINE L1 -1748 6060 5876 822 191 0 0 chr17 1723298 1723424 -87781129 - FLAM_C SINE Alu -16 127 2 1693 168 0 13 chr17 1723450 1723753 -87780800 + AluJb SINE Alu 1 299 -13 1989 112 6 22 chr17 1723804 1724116 -87780437 - AluSx SINE Alu -5 307 1 850 122 0 41 chr17 1724117 1724264 -87780289 - AluSq/x SINE Alu -172 141 1 183 42 0 0 chr17 1724837 1724861 -87779692 + (TG)n Simple_repeat Simple_repeat 2 25 0 1679 178 0 19 chr17 1724929 1725244 -87779309 + AluJo SINE Alu 1 309 -3 1252 191 10 54 chr17 1725308 1725622 -87778931 + AluJb SINE Alu 3 302 0 1530 118 118 19 chr17 1726009 1726280 -87778273 + AluSg SINE Alu 1 298 -12 2084 86 0 20 chr17 1726781 1727084 -87777469 + AluSq SINE Alu 1 297 -16 502 316 62 29 chr17 1727549 1727793 -87776760 + MIR SINE MIR 11 262 0 1235 172 28 16 chr17 1727987 1728237 -87776316 - L1MB3 LINE L1 -7 6176 5924 1384 170 147 8 chr17 1730277 1730542 -87774011 - AluJo SINE Alu 0 302 1 2173 119 0 13 chr17 1731275 1731585 -87772968 + AluSx SINE Alu 1 306 -6 329 0 0 24 chr17 1731585 1731627 -87772926 + (TA)n Simple_repeat Simple_repeat 2 42 0 248 0 0 30 chr17 1731626 1731659 -87772894 + (CA)n Simple_repeat Simple_repeat 2 33 0 * 1710 149 13 30 chr17 1731818 1732119 -87772434 + AluJo SINE Alu 1 296 -16 21 0 0 0 chr17 1732228 1732249 -87772304 + AT_rich Low_complexity Low_complexity 1 21 0 2102 120 0 10 chr17 1733895 1734203 -87770350 + AluSx SINE Alu 1 305 -7 1939 126 0 23 chr17 1735577 1735879 -87768674 + AluSx SINE Alu 2 296 -16 1783 132 16 46 chr17 1740057 1740360 -87764193 + AluSx SINE Alu 1 294 -18 217 267 0 67 chr17 1740887 1740962 -87763591 - MIR SINE MIR -79 129 60 1357 95 11 0 chr17 1741666 1741855 -87762698 - AluSg/x SINE Alu -18 294 104 2108 71 0 14 chr17 1741855 1742136 -87762417 - AluSg SINE Alu -33 277 1 344 93 0 0 chr17 1742142 1742196 -87762357 - Alu SINE Alu -7 294 241 227 351 0 0 chr17 1742203 1742280 -87762273 + L2 LINE L2 3232 3308 -5 1967 85 50 7 chr17 1742430 1742712 -87761841 + AluSx SINE Alu 2 295 -17 327 250 179 18 chr17 1742724 1743090 -87761463 + L2 LINE L2 2765 3191 -122 474 266 112 115 chr17 1745047 1745333 -87759220 + L2 LINE L2 2985 3269 -3 2185 105 3 10 chr17 1745338 1745652 -87758901 - AluSx SINE Alu 0 312 1 1492 174 60 11 chr17 1745652 1745934 -87758619 - AluJb SINE Alu -15 297 2 2141 108 0 13 chr17 1746704 1747010 -87757543 + AluSq SINE Alu 1 302 -11 201 313 30 0 chr17 1747076 1747143 -87757410 + MIR SINE MIR 70 138 -70 2122 80 0 21 chr17 1747283 1747593 -87756960 - AluY SINE Alu 0 304 1 2127 105 0 13 chr17 1747593 1747898 -87756655 - AluSq SINE Alu -12 301 1 2169 90 3 39 chr17 1748481 1748622 -87755931 + AluSx SINE Alu 1 145 -167 2045 81 3 14 chr17 1748622 1748929 -87755624 + AluSc SINE Alu 1 304 0 2169 90 3 39 chr17 1748929 1749096 -87755457 + AluSx SINE Alu 145 299 -13 567 120 0 22 chr17 1749372 1749464 -87755089 + AluS SINE Alu 1 90 -222 1123 112 0 0 chr17 1749464 1749625 -87754928 - AluSg/x SINE Alu -18 294 134 1721 152 3 23 chr17 1749625 1749928 -87754625 - AluSg SINE Alu -13 297 1 307 350 105 35 chr17 1749935 1750135 -87754418 + L2 LINE L2 3099 3312 -1 2201 56 3 30 chr17 1750758 1751063 -87753490 - AluY SINE Alu -14 297 1 181 288 136 15 chr17 1751066 1751132 -87753421 - MER5A DNA MER1_type -115 74 1 2242 96 3 3 chr17 1752591 1752894 -87751659 - AluSp SINE Alu -10 303 1 2240 78 3 13 chr17 1753781 1754087 -87750466 - AluSp SINE Alu -10 303 1 258 258 176 0 chr17 1754987 1755128 -87749425 - MIR SINE MIR -75 187 13 212 214 5 88 chr17 1755467 1755659 -87748894 + CT-rich Low_complexity Low_complexity 3 178 0 230 263 0 59 chr17 1755737 1755889 -87748664 + CT-rich Low_complexity Low_complexity 4 146 0 227 226 11 74 chr17 1755967 1756157 -87748396 + CT-rich Low_complexity Low_complexity 3 180 0 224 195 0 103 chr17 1756322 1756517 -87748036 + CT-rich Low_complexity Low_complexity 3 177 0 985 81 0 29 chr17 1756673 1756809 -87747744 + FLAM_C SINE Alu 1 132 -1 694 289 56 5 chr17 1758287 1758484 -87746069 - MIR SINE MIR -28 234 28 2240 84 0 7 chr17 1760020 1760316 -87744237 - AluY SINE Alu -17 294 1 604 104 208 19 chr17 1760318 1760424 -87744129 - AluSg SINE Alu -179 131 6 2282 98 0 0 chr17 1760666 1760972 -87743581 - AluSg SINE Alu -4 306 1 330 309 81 7 chr17 1760996 1761132 -87743421 - MIR SINE MIR -110 152 7 328 217 29 0 chr17 1762049 1762118 -87742435 + MIR SINE MIR 76 146 -62 324 346 22 15 chr17 1762118 1762254 -87742299 - L2 LINE L2 0 3313 3177 2208 100 0 16 chr17 1763227 1763537 -87741016 - AluSx SINE Alu -6 306 2 1840 109 0 84 chr17 1763549 1763870 -87740683 - AluSg SINE Alu -16 294 1 900 91 0 8 chr17 1763880 1764001 -87740552 - FLAM_C SINE Alu -21 122 3 389 235 198 43 chr17 1764005 1764167 -87740386 - MIR3 SINE MIR -10 198 12 276 344 81 63 chr17 1765423 1765490 -87739063 + L2 LINE L2 2835 2899 -414 1985 108 0 91 chr17 1765490 1765831 -87738722 - AluSg SINE Alu 0 310 1 276 344 81 63 chr17 1765831 1766015 -87738538 + L2 LINE L2 2899 3078 -235 2321 86 0 3 chr17 1766015 1766316 -87738237 - AluSx SINE Alu -12 300 1 276 344 81 63 chr17 1766316 1766508 -87738045 + L2 LINE L2 3078 3287 -26 2393 66 3 0 chr17 1766537 1766842 -87737711 - AluY SINE Alu -5 306 1 186 43 0 0 chr17 1767077 1767100 -87737453 + (TCC)n Simple_repeat Simple_repeat 2 24 0 248 238 24 24 chr17 1770681 1770765 -87733788 + G-rich Low_complexity Low_complexity 3 86 0 328 282 48 19 chr17 1771532 1771635 -87732918 - L1MC4 LINE L1 -478 7564 7459 1732 107 0 8 chr17 1771635 1771878 -87732675 + AluSx SINE Alu 1 241 -71 226 280 16 80 chr17 1771935 1772060 -87732493 - MIR SINE MIR -40 222 106 2268 86 7 0 chr17 1772165 1772561 -87731992 + AluY SINE Alu 1 311 0 2274 99 0 10 chr17 1772960 1773273 -87731280 + AluSg SINE Alu 1 310 0 2192 97 7 7 chr17 1773309 1773619 -87730934 + AluSx SINE Alu 1 310 -2 227 302 52 10 chr17 1773724 1773820 -87730733 - MIR SINE MIR -4 258 159 2403 61 3 0 chr17 1773821 1774114 -87730439 - AluSp SINE Alu -19 294 1 1791 161 3 10 chr17 1774117 1774415 -87730138 - AluJb SINE Alu -13 299 4 900 156 12 24 chr17 1774420 1774587 -87729966 - AluJo/FRAM SINE Alu -1 301 137 1312 115 0 11 chr17 1774590 1774781 -87729772 - AluSp SINE Alu -19 294 106 2071 84 40 17 chr17 1775180 1775477 -87729076 - AluSx SINE Alu -8 304 1 255 333 20 10 chr17 1775490 1775589 -87728964 - MER5A DNA MER1_type -83 106 7 1547 154 110 4 chr17 1775986 1776259 -87728294 - AluSx SINE Alu -10 302 1 866 121 15 23 chr17 1776269 1776401 -87728152 - FLAM_C SINE Alu -2 131 1 2219 63 0 22 chr17 1776404 1776720 -87727833 - AluY SINE Alu 0 311 3 21 36 0 0 chr17 1776724 1776752 -87727801 + AT_rich Low_complexity Low_complexity 1 28 0 204 275 87 72 chr17 1776833 1776877 -87727676 - MIR SINE MIR -177 85 38 942 216 22 57 chr17 1776877 1777104 -87727449 + MER20 DNA MER1_type 1 219 0 204 275 87 72 chr17 1777104 1777128 -87727425 - MIR SINE MIR -224 38 16 2425 77 0 13 chr17 1777579 1777892 -87726661 + AluSx SINE Alu 1 309 -3 23 92 0 0 chr17 1780140 1780205 -87724348 + GC_rich Low_complexity Low_complexity 1 65 0 224 269 44 19 chr17 1781501 1781661 -87722892 + A-rich Low_complexity Low_complexity 4 167 0 555 176 29 0 chr17 1781708 1781810 -87722743 + AluSg/x SINE Alu 187 291 -18 1332 183 32 32 chr17 1782184 1782310 -87722243 + AluJo SINE Alu 1 126 -186 2198 70 10 30 chr17 1782310 1782609 -87721944 - AluSq SINE Alu -20 293 1 1332 183 32 32 chr17 1782609 1782766 -87721787 + AluJo SINE Alu 125 284 -28 38 0 0 0 chr17 1782766 1782804 -87721749 + AT_rich Low_complexity Low_complexity 1 38 0 516 153 82 0 chr17 1783904 1784002 -87720551 + FLAM_A SINE Alu 22 127 -15 4579 141 44 31 chr17 1784002 1784634 -87719919 - Tigger1 DNA MER2_type -194 2224 1576 1483 147 124 15 chr17 1784634 1784899 -87719654 - AluJb SINE Alu -18 294 1 4579 141 44 31 chr17 1784899 1785155 -87719398 - Tigger1 DNA MER2_type -842 1576 1325 338 95 16 79 chr17 1785155 1785218 -87719335 - Tigger1 DNA MER2_type -1035 1383 1325 3573 127 11 21 chr17 1785257 1785873 -87718680 - Tigger1 DNA MER2_type -1012 1406 797 577 91 0 0 chr17 1785877 1785954 -87718599 - AluJo SINE Alu -10 302 226 1050 157 56 6 chr17 1785954 1786132 -87718421 - AluJo SINE Alu -125 187 1 1136 101 22 6 chr17 1786132 1786310 -87718243 - Tigger1 DNA MER2_type -1614 804 624 1556 165 38 70 chr17 1786310 1786451 -87718102 - Tigger1 DNA MER2_type -2060 358 214 2330 87 0 13 chr17 1786451 1786750 -87717803 + AluSc SINE Alu 1 295 -14 1556 165 38 70 chr17 1786750 1786779 -87717774 - Tigger1 DNA MER2_type -2204 214 186 1983 125 0 27 chr17 1786779 1787075 -87717478 + AluSx SINE Alu 1 288 -24 1556 165 38 70 chr17 1787075 1787273 -87717280 - Tigger1 DNA MER2_type -2232 186 1 411 200 0 67 chr17 1787273 1787362 -87717191 + MER58B DNA MER1_type 259 341 0 1652 203 0 20 chr17 1788519 1788825 -87715728 - AluJb SINE Alu -12 300 1 195 42 0 0 chr17 1788832 1788856 -87715697 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2490 82 0 3 chr17 1788903 1789208 -87715345 + AluSq SINE Alu 1 304 -9 250 232 0 18 chr17 1789217 1789273 -87715280 + L1MB7 LINE L1 5559 5613 -508 1913 158 21 0 chr17 1789275 1789566 -87714987 + AluJb SINE Alu 1 297 -15 2263 93 0 13 chr17 1789568 1789869 -87714684 + AluY SINE Alu 1 297 -14 2051 94 0 11 chr17 1790649 1790924 -87713629 - AluSx SINE Alu -40 272 1 2170 99 7 3 chr17 1791216 1791500 -87713053 - AluSq SINE Alu -17 296 12 1561 202 0 38 chr17 1793074 1793391 -87711162 - AluJo SINE Alu -7 305 1 1934 146 14 7 chr17 1793397 1793691 -87710862 - AluSx SINE Alu -16 296 1 612 187 15 8 chr17 1793726 1793860 -87710693 - L1MB3 LINE L1 -1 6182 6048 354 264 0 0 chr17 1793860 1793947 -87710606 + L1MB7 LINE L1 5938 6024 -160 311 213 85 53 chr17 1793954 1794048 -87710505 - L1MB3 LINE L1 -147 6036 5940 275 143 111 0 chr17 1794459 1794522 -87710031 - MIR SINE MIR -102 160 91 217 132 0 0 chr17 1794555 1794593 -87709960 + (T)n Simple_repeat Simple_repeat 1 38 0 518 140 190 10 chr17 1794706 1794806 -87709747 + FLAM_A SINE Alu 1 118 -15 2200 75 14 11 chr17 1794891 1795213 -87709340 - AluSx SINE Alu 0 323 1 542 257 56 76 chr17 1795224 1795473 -87709080 - MIR SINE MIR -4 258 15 333 303 49 16 chr17 1795955 1796077 -87708476 + MIR3 SINE MIR 76 201 -7 2329 68 11 4 chr17 1799427 1799733 -87704820 - AluSg SINE Alu 0 308 1 2060 124 3 7 chr17 1799781 1800071 -87704482 + AluJo SINE Alu 1 289 -23 2251 119 0 3 chr17 1800085 1800387 -87704166 + AluSx SINE Alu 5 305 -7 2116 78 0 119 chr17 1800436 1800780 -87703773 - AluSc SINE Alu -6 303 1 1881 140 14 7 chr17 1800919 1801211 -87703342 + AluSx SINE Alu 1 294 -18 959 98 98 20 chr17 1801827 1801980 -87702573 - AluSg/x SINE Alu -19 291 127 2196 92 7 3 chr17 1801989 1802294 -87702259 - AluY SINE Alu 0 306 1 2257 87 37 7 chr17 1802306 1802604 -87701949 - AluSp SINE Alu -6 307 1 2359 94 0 19 chr17 1802981 1803299 -87701254 - AluSx SINE Alu 0 312 1 2550 43 7 10 chr17 1805557 1805862 -87698691 + AluSp SINE Alu 1 304 -9 2340 88 7 19 chr17 1810004 1810312 -87694241 - AluSq SINE Alu -6 307 4 2413 103 3 0 chr17 1810364 1810674 -87693879 + AluSx SINE Alu 1 311 -1 192 356 33 22 chr17 1811413 1811503 -87693050 + MIR SINE MIR 124 214 -48 283 356 7 34 chr17 1811735 1811881 -87692672 + L3 LINE CR1 1296 1437 -140 2325 89 0 13 chr17 1812228 1812541 -87692012 + AluSx SINE Alu 1 309 -3 604 231 62 59 chr17 1812666 1812967 -87691586 + MLT1C LTR MaLR 5 316 -151 1012 172 22 43 chr17 1812967 1813199 -87691354 + AluJb SINE Alu 86 312 0 744 176 13 13 chr17 1813199 1813352 -87691201 + MLT1C LTR MaLR 306 458 -9 399 21 0 0 chr17 1813646 1813694 -87690859 + (CA)n Simple_repeat Simple_repeat 1 48 0 2473 54 0 16 chr17 1813759 1814073 -87690480 + AluY SINE Alu 1 309 -2 2078 114 3 23 chr17 1814872 1815179 -87689374 - AluSg SINE Alu -9 301 1 202 278 0 28 chr17 1817767 1817839 -87686714 + CT-rich Low_complexity Low_complexity 2 71 0 1878 141 7 23 chr17 1819306 1819611 -87684942 + AluSx SINE Alu 1 300 -12 2294 96 0 13 chr17 1819967 1820270 -87684283 - AluSx SINE Alu -13 299 1 693 163 0 0 chr17 1820868 1820991 -87683562 + FLAM_A SINE Alu 4 126 -7 22 0 0 0 chr17 1820991 1821013 -87683540 + AT_rich Low_complexity Low_complexity 1 22 0 2166 92 0 11 chr17 1821026 1821310 -87683243 + AluSx SINE Alu 1 281 -31 2302 79 7 0 chr17 1821316 1821623 -87682930 + AluY SINE Alu 1 309 0 279 323 76 76 chr17 1871849 1872150 -87632403 - L2 LINE L2 -64 3208 2905 2314 102 0 0 chr17 1872150 1872453 -87632100 + AluSx SINE Alu 1 303 -9 279 323 76 76 chr17 1872453 1872547 -87632006 - L2 LINE L2 -366 2906 2813 2343 97 0 0 chr17 1873699 1874009 -87630544 + AluSx SINE Alu 1 310 -2 335 254 120 14 chr17 1874014 1874156 -87630397 - MIR3 SINE MIR -41 167 11 264 59 0 0 chr17 1875279 1875313 -87629240 + (CA)n Simple_repeat Simple_repeat 2 35 0 370 343 36 36 chr17 1876199 1876447 -87628106 + MIR SINE MIR 1 248 -14 2304 79 3 3 chr17 1879148 1879451 -87625102 - AluSx SINE Alu -9 303 1 1667 160 26 36 chr17 1879451 1879628 -87624925 - AluJb SINE Alu -9 303 129 2106 127 0 3 chr17 1879628 1879919 -87624634 + AluSx SINE Alu 1 290 -22 1667 160 26 36 chr17 1879919 1880047 -87624506 - AluJb SINE Alu -183 129 1 213 217 0 28 chr17 1881260 1881326 -87623227 + C-rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr17 1881990 1882020 -87622533 + GC_rich Low_complexity Low_complexity 1 30 0 231 236 0 0 chr17 1882917 1882989 -87621564 + CT-rich Low_complexity Low_complexity 3 74 0 437 330 157 22 chr17 1883810 1884077 -87620476 - L2 LINE L2 -6 3307 3005 2449 56 0 0 chr17 1884130 1884432 -87620121 + AluSg SINE Alu 1 302 -8 2166 99 26 0 chr17 1884438 1884740 -87619813 + AluSx SINE Alu 1 310 -2 239 298 96 0 chr17 1884939 1885033 -87619520 - L2 LINE L2 -217 3055 2953 757 140 0 66 chr17 1885098 1885234 -87619319 + FLAM_C SINE Alu 14 140 -3 264 274 36 24 chr17 1885422 1885506 -87619047 - MIR SINE MIR -76 132 48 1728 144 26 49 chr17 1886898 1887203 -87617350 + AluJo SINE Alu 1 298 -14 251 254 17 0 chr17 1888164 1888223 -87616330 - L2 LINE L2 -5 3267 3208 216 288 0 0 chr17 1888575 1888634 -87615919 + L2 LINE L2 3255 3313 0 1382 186 16 52 chr17 1888708 1888848 -87615705 + AluJo SINE Alu 1 144 -168 2374 74 0 16 chr17 1888848 1889157 -87615396 + AluSx SINE Alu 1 304 -8 1382 186 16 52 chr17 1889157 1889323 -87615230 + AluJo SINE Alu 144 296 -16 188 263 50 50 chr17 1889408 1889507 -87615046 + L2 LINE L2 3093 3191 -81 592 205 37 74 chr17 1890136 1890302 -87614251 - LTR39 LTR ERV1 0 783 623 2149 77 40 3 chr17 1890302 1890600 -87613953 - AluY SINE Alu -2 309 1 592 205 37 74 chr17 1890600 1890623 -87613930 - LTR39 LTR ERV1 -160 623 601 1088 174 59 41 chr17 1890751 1891021 -87613532 - LTR39 LTR ERV1 -508 275 1 273 57 0 135 chr17 1892014 1892155 -87612398 + (CCCCCT)n Simple_repeat Simple_repeat 2 123 0 536 110 0 94 chr17 1892169 1892360 -87612193 + (CCCCCT)n Simple_repeat Simple_repeat 2 174 0 216 217 0 33 chr17 1892372 1892432 -87612121 + C-rich Low_complexity Low_complexity 3 60 0 218 281 0 0 chr17 1894752 1894809 -87609744 - MIR SINE MIR -111 97 41 541 327 28 28 chr17 1895494 1895711 -87608842 + MIR SINE MIR 43 259 -3 1571 168 23 52 chr17 1895711 1896020 -87608533 + AluJb SINE Alu 1 300 -12 1687 181 87 0 chr17 1896118 1896428 -87608125 + MER1B DNA MER1_type 1 337 0 467 243 44 29 chr17 1896613 1896749 -87607804 - MIR3 SINE MIR -32 176 39 2287 85 0 0 chr17 1896749 1897043 -87607510 - AluY SINE Alu -16 295 2 2606 43 0 0 chr17 1897055 1897360 -87607193 - AluY SINE Alu -6 305 1 183 309 149 75 chr17 1898521 1898709 -87605844 - L2 LINE L2 -29 3284 3083 335 308 157 0 chr17 1898954 1899113 -87605440 + MIR SINE MIR 17 200 -62 25 0 0 0 chr17 1899277 1899302 -87605251 + GC_rich Low_complexity Low_complexity 1 25 0 1730 160 17 10 chr17 1901701 1901995 -87602558 - AluJb SINE Alu -11 301 6 1624 174 26 16 chr17 1902012 1902316 -87602237 - AluJb SINE Alu -5 307 1 326 245 47 9 chr17 1902850 1902956 -87601597 + Charlie8 DNA MER1_type 91 200 -2217 2156 110 10 0 chr17 1903347 1903647 -87600906 + AluSp SINE Alu 1 303 -10 1208 97 0 0 chr17 1903648 1903802 -87600751 + AluSg/x SINE Alu 135 288 -24 312 275 101 9 chr17 1903811 1903920 -87600633 + MER5A DNA MER1_type 71 189 0 2107 134 0 0 chr17 1904095 1904400 -87600153 - AluSx SINE Alu -7 305 1 2038 143 0 3 chr17 1904475 1904782 -87599771 + AluJo SINE Alu 1 306 -6 1228 140 0 0 chr17 1904783 1904961 -87599592 + AluSg/x SINE Alu 124 301 -9 207 130 74 0 chr17 1904962 1905016 -87599537 + (TA)n Simple_repeat Simple_repeat 1 58 0 1232 162 5 5 chr17 1905070 1905286 -87599267 - AluSg/x SINE Alu -12 300 85 1213 161 71 36 chr17 1905287 1905567 -87598986 - AluJo SINE Alu -22 290 1 1691 149 0 70 chr17 1905578 1905894 -87598659 - AluJb SINE Alu -18 294 1 21 0 0 0 chr17 1906300 1906321 -87598232 + GC_rich Low_complexity Low_complexity 1 21 0 251 294 69 10 chr17 1908532 1908634 -87595919 + MIR SINE MIR 112 219 -43 26 64 0 0 chr17 1908768 1908815 -87595738 + AT_rich Low_complexity Low_complexity 1 47 0 479 111 49 0 chr17 1908848 1908929 -87595624 - AluY SINE Alu -27 284 200 23 0 0 0 chr17 1909153 1909176 -87595377 + GC_rich Low_complexity Low_complexity 1 23 0 31 76 0 0 chr17 1910505 1910571 -87593982 + GC_rich Low_complexity Low_complexity 1 66 0 28 48 0 0 chr17 1911355 1911397 -87593156 + GC_rich Low_complexity Low_complexity 1 42 0 200 292 0 31 chr17 1912117 1912213 -87592340 + C-rich Low_complexity Low_complexity 3 95 0 27 62 0 0 chr17 1912531 1912579 -87591974 + GC_rich Low_complexity Low_complexity 1 48 0 1873 181 0 3 chr17 1915299 1915603 -87588950 + AluJb SINE Alu 6 308 -4 23 0 0 0 chr17 1915746 1915769 -87588784 + AT_rich Low_complexity Low_complexity 1 23 0 212 109 0 22 chr17 1915786 1915832 -87588721 + (TAGG)n Simple_repeat Simple_repeat 4 48 0 2123 100 13 3 chr17 1915852 1916151 -87588402 - AluSq SINE Alu -11 302 1 517 143 22 22 chr17 1916151 1916242 -87588311 - AluSg/x SINE Alu -7 302 212 454 346 64 40 chr17 1916705 1916976 -87587577 + L1MC4a LINE L1 5656 5838 -283 2576 39 3 3 chr17 1916977 1917287 -87587266 + AluYb8 SINE Alu 1 310 -8 429 218 58 11 chr17 1917301 1917475 -87587078 + L1MB7 LINE L1 4378 4559 -1587 315 254 10 62 chr17 1917533 1917685 -87586868 + L1MB7 LINE L1 4976 5093 -1053 1801 78 12 4 chr17 1917767 1918012 -87586541 + AluSg SINE Alu 44 290 -20 537 161 102 8 chr17 1918232 1918350 -87586203 - MER5A DNA MER1_type -33 156 28 283 182 0 0 chr17 1918377 1918390 -87586163 + MER3 DNA MER1_type 36 48 -161 674 210 114 0 chr17 1918390 1918557 -87585996 - MER3 DNA MER1_type -1 208 23 266 272 201 65 chr17 1918620 1918793 -87585760 + L3 LINE CR1 1188 1336 -241 1718 169 10 14 chr17 1918793 1919088 -87585465 - AluJo SINE Alu -18 294 1 266 272 201 65 chr17 1919088 1919252 -87585301 + L3 LINE CR1 1336 1571 -6 574 189 66 41 chr17 1919376 1919498 -87585055 - FLAM_A SINE Alu -6 136 12 588 166 134 16 chr17 1919521 1919708 -87584845 + L1MB7 LINE L1 5083 5291 -855 859 104 17 0 chr17 1919708 1919823 -87584730 + FLAM_C SINE Alu 1 117 -16 201 39 0 0 chr17 1919866 1919892 -87584661 + (TCTA)n Simple_repeat Simple_repeat 4 29 0 3889 150 36 31 chr17 1919892 1919947 -87584606 + L1MB7 LINE L1 5275 5328 -856 2444 64 0 13 chr17 1919947 1920258 -87584295 + AluSp SINE Alu 1 307 -6 3889 150 36 31 chr17 1920258 1921107 -87583446 + L1MB7 LINE L1 5328 6184 0 387 163 12 25 chr17 1921200 1921280 -87583273 - L1MA10 LINE L1 0 6334 6256 1193 202 4 16 chr17 1921288 1921395 -87583158 - AluJb SINE Alu -67 245 138 2248 92 0 25 chr17 1921395 1921712 -87582841 - AluSq SINE Alu -4 309 1 1193 202 4 16 chr17 1921712 1921852 -87582701 - AluJb SINE Alu -174 138 1 628 301 8 25 chr17 1921922 1922158 -87582395 - L1MEd LINE L1 -5424 695 464 396 313 57 83 chr17 1922179 1922447 -87582106 - L1MEd LINE L1 -5776 343 85 1510 147 41 57 chr17 1922447 1922761 -87581792 - AluSx SINE Alu -3 309 1 396 313 57 83 chr17 1922761 1922843 -87581710 - L1MEd LINE L1 -6034 85 2 253 108 0 0 chr17 1922882 1922919 -87581634 + Alu SINE Alu 5 41 -261 577 118 11 0 chr17 1922919 1923012 -87581541 + AluSg/x SINE Alu 215 308 -4 1613 155 13 79 chr17 1923894 1924211 -87580342 - AluSx SINE Alu -16 296 1 335 226 9 70 chr17 1924239 1924354 -87580199 - MIR SINE MIR -50 212 105 2180 93 0 0 chr17 1924466 1924745 -87579808 + AluSx SINE Alu 11 289 -23 743 203 0 0 chr17 1924804 1924927 -87579626 + FLAM_A SINE Alu 4 126 -7 3687 141 32 71 chr17 1925021 1925256 -87579297 + L1MB3 LINE L1 5374 5617 -566 1840 131 11 3 chr17 1925256 1925565 -87578988 + AluJb SINE Alu 1 311 0 3687 141 32 71 chr17 1925565 1925922 -87578631 + L1MB3 LINE L1 5617 5986 -197 1942 159 0 0 chr17 1925922 1926218 -87578335 + AluSx SINE Alu 1 296 -16 3687 141 32 71 chr17 1926218 1926413 -87578140 + L1MB3 LINE L1 5986 6131 -52 2302 101 0 0 chr17 1926413 1926720 -87577833 + AluSx SINE Alu 1 307 -5 3687 141 32 71 chr17 1926720 1926772 -87577781 + L1MB3 LINE L1 6131 6183 0 1950 155 9 40 chr17 1927368 1927716 -87576837 + MER1B DNA MER1_type 1 337 0 3382 203 66 21 chr17 1929740 1930428 -87574125 + L1ME1 LINE L1 5191 5932 -234 1048 90 229 5 chr17 1930428 1930616 -87573937 - MER30 DNA MER1_type 0 230 1 3382 203 66 21 chr17 1930616 1930842 -87573711 + L1ME1 LINE L1 5932 6146 -20 1567 172 46 4 chr17 1932112 1932373 -87572180 + AluJb SINE Alu 23 294 -18 2162 107 0 30 chr17 1932393 1932692 -87571861 - AluSx SINE Alu -15 297 8 25 0 0 0 chr17 1933376 1933401 -87571152 + AT_rich Low_complexity Low_complexity 1 25 0 2273 108 3 13 chr17 1933445 1933760 -87570793 + AluSq SINE Alu 1 312 -1 1955 156 7 3 chr17 1933981 1934282 -87570271 - AluJb SINE Alu -1 311 10 1283 164 5 0 chr17 1935973 1936174 -87568379 + AluJo SINE Alu 1 202 -110 2926 208 45 46 chr17 1936203 1936476 -87568077 + L1ME2 LINE L1 5152 5424 -740 2101 120 7 29 chr17 1936476 1936784 -87567769 + AluSx SINE Alu 1 301 -11 2926 208 45 46 chr17 1936784 1937514 -87567039 + L1ME2 LINE L1 5424 6148 -16 672 159 24 0 chr17 1937699 1937825 -87566728 + AluJb SINE Alu 2 130 -182 713 276 150 46 chr17 1937837 1937989 -87566564 - L1ME4a LINE L1 -6 6115 5980 234 0 0 0 chr17 1937989 1938015 -87566538 + (CA)n Simple_repeat Simple_repeat 2 27 0 713 276 150 46 chr17 1938015 1938069 -87566484 - L1ME4a LINE L1 -141 5980 5933 1832 190 3 0 chr17 1938069 1938379 -87566174 - AluJb SINE Alu -1 311 1 713 276 150 46 chr17 1938379 1938610 -87565943 - L1ME4a LINE L1 -188 5933 5631 1651 244 113 43 chr17 1939185 1939886 -87564667 + L2 LINE L2 2305 3067 -246 188 319 0 0 chr17 1939939 1939986 -87564567 - L2 LINE L2 -16 3256 3210 635 164 9 9 chr17 1940046 1940162 -87564391 - AluJ SINE Alu -16 296 181 633 91 20 20 chr17 1940165 1940264 -87564289 - AluSq SINE Alu -93 220 122 860 91 80 148 chr17 1940264 1940326 -87564227 - AluJ SINE Alu -137 175 110 2258 89 4 0 chr17 1940326 1940640 -87563913 + AluSg SINE Alu 1 315 0 860 91 80 148 chr17 1940640 1940752 -87563801 - AluJ SINE Alu -202 110 12 182 272 35 70 chr17 1940753 1940867 -87563686 - MIR SINE MIR -60 148 39 2090 114 37 23 chr17 1940895 1941194 -87563359 + AluSx SINE Alu 7 309 -3 1509 208 27 3 chr17 1941204 1941502 -87563051 + AluJo SINE Alu 1 305 -7 331 329 118 54 chr17 1941882 1942195 -87562358 - L1MEd LINE L1 -4922 1197 865 2176 105 3 25 chr17 1942214 1942528 -87562025 - AluSx SINE Alu -5 307 1 1641 215 0 3 chr17 1942612 1942905 -87561648 + AluJb SINE Alu 1 292 -20 2032 134 3 7 chr17 1943133 1943440 -87561113 - AluSx SINE Alu -6 306 1 1749 146 0 11 chr17 1943441 1943716 -87560837 - AluJo SINE Alu -6 306 35 586 138 107 16 chr17 1943767 1943926 -87560627 + MER46A DNA MER2_type 5 227 -9 474 218 9 36 chr17 1944304 1944414 -87560139 + MLT1D LTR MaLR 1 107 -398 2303 114 0 0 chr17 1944416 1944715 -87559838 - AluSx SINE Alu -13 299 1 1234 112 0 51 chr17 1944722 1944918 -87559635 - AluSg/x SINE Alu 0 312 127 2227 105 3 20 chr17 1944935 1945231 -87559322 - AluSq SINE Alu -18 295 5 1691 146 4 0 chr17 1945299 1945546 -87559007 - AluSx SINE Alu -21 291 44 612 271 38 55 chr17 1945594 1945886 -87558667 + L1M4 LINE L1 4076 4362 -1784 1814 165 28 3 chr17 1945891 1946182 -87558371 + AluJb SINE Alu 2 299 -13 1864 184 0 0 chr17 1946238 1946537 -87558016 + AluJo SINE Alu 1 299 -13 661 224 0 8 chr17 1946687 1946821 -87557732 - FLAM_A SINE Alu 0 133 1 2228 89 6 25 chr17 1946826 1947141 -87557412 - AluY SINE Alu -2 309 1 384 243 28 19 chr17 1947145 1947252 -87557301 - MIR SINE MIR -61 147 40 985 252 20 20 chr17 1949077 1949327 -87555226 - MIR SINE MIR -1 261 12 297 89 0 0 chr17 1951336 1951381 -87553172 + (CA)n Simple_repeat Simple_repeat 1 45 0 195 100 0 0 chr17 1951465 1951495 -87553058 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 2138 130 10 0 chr17 1956108 1956415 -87548138 + AluSx SINE Alu 1 310 -2 2440 67 0 38 chr17 1957871 1958186 -87546367 - AluY SINE Alu -8 303 1 1981 89 4 8 chr17 1958188 1958447 -87546106 - AluSx SINE Alu -11 301 44 431 287 13 57 chr17 1958959 1959116 -87545437 + MIR SINE MIR 2 151 -111 2073 144 7 0 chr17 1959118 1959423 -87545130 + AluSx SINE Alu 1 307 -5 1052 174 14 55 chr17 1959423 1959642 -87544911 + AluJb SINE Alu 88 297 -15 191 317 17 0 chr17 1959646 1959706 -87544847 + MIR SINE MIR 190 250 -12 327 217 0 29 chr17 1959907 1959976 -87544577 - AluJ SINE Alu -39 263 197 737 154 46 23 chr17 1959981 1960111 -87544442 - AluJ SINE Alu -171 141 9 1926 139 42 3 chr17 1960455 1960743 -87543810 - AluSx SINE Alu -13 299 1 621 167 7 65 chr17 1960750 1960888 -87543665 - FLAM_C SINE Alu -12 131 2 239 202 85 53 chr17 1961667 1961761 -87542792 - L2 LINE L2 -3 3310 3214 1169 200 90 48 chr17 1962265 1962417 -87542136 - AluJo SINE Alu 0 302 158 2268 91 0 17 chr17 1962417 1962713 -87541840 - AluSx SINE Alu -21 291 1 1169 200 90 48 chr17 1962713 1962850 -87541703 - AluJo SINE Alu -144 158 1 187 147 44 103 chr17 1962901 1962961 -87541592 - L2 LINE L2 -9 3304 3247 252 0 0 0 chr17 1962961 1962989 -87541564 + (CAAGA)n Simple_repeat Simple_repeat 5 32 0 209 279 192 0 chr17 1963189 1963293 -87541260 - L3 LINE CR1 -22 1555 1432 1754 158 65 3 chr17 1963349 1963640 -87540913 - AluJb SINE Alu -3 309 1 509 258 151 82 chr17 1963718 1964184 -87540369 - L3 LINE CR1 -136 1441 932 1632 183 23 42 chr17 1964184 1964490 -87540063 - AluJb SINE Alu -12 300 1 509 258 151 82 chr17 1964490 1964561 -87539992 - L3 LINE CR1 -645 932 867 320 333 46 20 chr17 1964676 1964829 -87539724 - L3 LINE CR1 -720 857 701 2317 103 7 0 chr17 1964834 1965135 -87539418 - AluSq SINE Alu -10 303 1 219 254 0 17 chr17 1966016 1966075 -87538478 + MER5A DNA MER1_type 28 85 -104 1762 172 0 17 chr17 1966075 1966234 -87538319 - AluSx SINE Alu -20 292 139 1957 176 3 0 chr17 1966234 1966541 -87538012 - AluSx SINE Alu -4 308 1 1762 172 0 17 chr17 1966541 1966678 -87537875 - AluSx SINE Alu -173 139 1 1425 174 121 11 chr17 1966787 1967051 -87537502 - AluJb SINE Alu -19 293 1 649 150 0 0 chr17 1967055 1967155 -87537398 - AluJ/FLAM SINE Alu -211 101 2 2018 143 0 17 chr17 1967313 1967606 -87536947 - AluJo SINE Alu -24 288 1 640 283 59 0 chr17 1967871 1968058 -87536495 - MIR SINE MIR -4 258 61 2987 165 34 36 chr17 1968395 1968565 -87535988 - L1MA7 LINE L1 0 6291 6122 1790 155 3 48 chr17 1968565 1968874 -87535679 - AluJb SINE Alu -17 295 1 2987 165 34 36 chr17 1968874 1969371 -87535182 - L1MA7 LINE L1 -169 6122 5625 2454 80 0 0 chr17 1970155 1970454 -87534099 - AluY SINE Alu -12 299 1 1002 152 0 0 chr17 1970454 1970599 -87533954 - AluSq/x SINE Alu -168 145 1 238 294 327 20 chr17 1970910 1971063 -87533490 - MIR SINE MIR -62 200 1 826 178 20 13 chr17 1971129 1971281 -87533272 - AluJb SINE Alu -19 293 141 181 376 47 0 chr17 1971923 1972008 -87532545 + L3 LINE CR1 1485 1573 -4 666 197 0 0 chr17 1979128 1979275 -87525278 + (TG)n Simple_repeat Simple_repeat 1 147 0 369 0 0 0 chr17 1979535 1979576 -87524977 + (CA)n Simple_repeat Simple_repeat 2 42 0 205 250 0 0 chr17 1980543 1980587 -87523966 + G-rich Low_complexity Low_complexity 3 46 0 195 42 0 0 chr17 1982252 1982276 -87522277 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1435 143 0 5 chr17 1982281 1982504 -87522049 + AluJb SINE Alu 89 310 -2 256 244 25 50 chr17 1982690 1982809 -87521744 + MER113 DNA MER1_type? 5 120 -401 221 222 19 0 chr17 1985767 1985821 -87518732 + MIR SINE MIR 196 250 -12 2264 100 0 0 chr17 1985948 1986263 -87518290 - AluSx SINE Alu 0 316 2 216 0 0 0 chr17 1986267 1986291 -87518262 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2501 80 0 0 chr17 1986309 1986610 -87517943 + AluSg SINE Alu 1 301 -9 365 61 0 0 chr17 1986628 1986677 -87517876 + AluSq/x SINE Alu 87 135 -168 2076 129 0 14 chr17 1986677 1986971 -87517582 + AluSq SINE Alu 1 290 -23 1052 143 0 0 chr17 1986975 1987122 -87517431 - FRAM SINE Alu -30 146 1 243 321 21 57 chr17 1990255 1990448 -87514105 - L2 LINE L2 -213 3059 2874 771 181 94 7 chr17 1990562 1990711 -87513842 - FAM SINE Alu -13 162 1 354 211 26 0 chr17 1990711 1990787 -87513766 - MIR SINE MIR -112 150 73 194 357 29 14 chr17 1990794 1990934 -87513619 - L2 LINE L2 -452 2862 2721 232 315 110 0 chr17 1990996 1991069 -87513484 + MER91C DNA MER1_type 30 110 -30 2151 121 28 0 chr17 1991261 1991551 -87513002 - AluSq SINE Alu -15 298 1 2330 102 0 0 chr17 1991850 1992143 -87512410 - AluSx SINE Alu -19 293 1 1722 101 93 12 chr17 1992265 1992512 -87512041 + AluSc SINE Alu 34 300 -9 2341 89 0 0 chr17 1992672 1993003 -87511550 + AluSx SINE Alu 1 331 0 2104 141 3 0 chr17 1993022 1993327 -87511226 + AluSx SINE Alu 7 312 0 729 252 19 27 chr17 1993401 1993506 -87511047 - MIR SINE MIR -12 250 146 2474 88 0 3 chr17 1993506 1993814 -87510739 - AluSg SINE Alu -3 307 1 729 252 19 27 chr17 1993814 1993925 -87510628 - MIR SINE MIR -116 146 40 985 252 20 20 chr17 1995749 1995999 -87508554 - MIR SINE MIR -1 261 12 315 85 0 0 chr17 1998008 1998055 -87506498 + (CA)n Simple_repeat Simple_repeat 1 47 0 195 100 0 0 chr17 1998139 1998169 -87506384 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 2211 133 3 0 chr17 2002781 2003090 -87501463 + AluSx SINE Alu 1 310 -2 2440 67 0 38 chr17 2004546 2004861 -87499692 - AluY SINE Alu -8 303 1 1981 89 4 8 chr17 2004863 2005122 -87499431 - AluSx SINE Alu -11 301 44 431 287 13 57 chr17 2005634 2005791 -87498762 + MIR SINE MIR 2 151 -111 2073 144 7 0 chr17 2005793 2006098 -87498455 + AluSx SINE Alu 1 307 -5 1052 174 14 55 chr17 2006098 2006317 -87498236 + AluJb SINE Alu 88 297 -15 191 317 17 0 chr17 2006321 2006381 -87498172 + MIR SINE MIR 190 250 -12 327 217 0 29 chr17 2006582 2006651 -87497902 - AluJ SINE Alu -39 263 197 743 155 47 16 chr17 2006656 2006785 -87497768 - AluJ SINE Alu -171 141 9 1926 139 42 3 chr17 2007129 2007417 -87497136 - AluSx SINE Alu -13 299 1 621 167 7 65 chr17 2007424 2007562 -87496991 - FLAM_C SINE Alu -12 131 2 239 202 85 53 chr17 2008341 2008435 -87496118 - L2 LINE L2 -3 3310 3214 1169 200 90 48 chr17 2008939 2009091 -87495462 - AluJo SINE Alu 0 302 158 2268 91 0 17 chr17 2009091 2009387 -87495166 - AluSx SINE Alu -21 291 1 1169 200 90 48 chr17 2009387 2009524 -87495029 - AluJo SINE Alu -144 158 1 187 147 44 103 chr17 2009575 2009635 -87494918 - L2 LINE L2 -9 3304 3247 252 0 0 0 chr17 2009635 2009663 -87494890 + (CAAGA)n Simple_repeat Simple_repeat 5 32 0 209 279 192 0 chr17 2009863 2009967 -87494586 - L3 LINE CR1 -22 1555 1432 1754 158 65 3 chr17 2010023 2010314 -87494239 - AluJb SINE Alu -3 309 1 513 255 151 82 chr17 2010392 2010858 -87493695 - L3 LINE CR1 -136 1441 932 1632 183 23 42 chr17 2010858 2011164 -87493389 - AluJb SINE Alu -12 300 1 513 255 151 82 chr17 2011164 2011235 -87493318 - L3 LINE CR1 -645 932 867 320 333 46 20 chr17 2011350 2011503 -87493050 - L3 LINE CR1 -720 857 701 2317 103 7 0 chr17 2011508 2011809 -87492744 - AluSq SINE Alu -10 303 1 219 254 0 17 chr17 2012690 2012749 -87491804 + MER5A DNA MER1_type 28 85 -104 1762 172 0 17 chr17 2012749 2012908 -87491645 - AluSx SINE Alu -20 292 139 1957 176 3 0 chr17 2012908 2013215 -87491338 - AluSx SINE Alu -4 308 1 1762 172 0 17 chr17 2013215 2013352 -87491201 - AluSx SINE Alu -173 139 1 1425 174 121 11 chr17 2013461 2013725 -87490828 - AluJb SINE Alu -19 293 1 649 150 0 0 chr17 2013729 2013829 -87490724 - AluJ/FLAM SINE Alu -211 101 2 2018 143 0 17 chr17 2013987 2014280 -87490273 - AluJo SINE Alu -24 288 1 640 283 59 0 chr17 2014546 2014733 -87489820 - MIR SINE MIR -4 258 61 2987 165 34 36 chr17 2015070 2015240 -87489313 - L1MA7 LINE L1 0 6291 6122 1759 158 3 52 chr17 2015240 2015550 -87489003 - AluJb SINE Alu -17 295 1 2987 165 34 36 chr17 2015550 2016047 -87488506 - L1MA7 LINE L1 -169 6122 5625 2454 80 0 0 chr17 2016831 2017130 -87487423 - AluY SINE Alu -12 299 1 1002 152 0 0 chr17 2017130 2017275 -87487278 - AluSq/x SINE Alu -167 145 1 238 294 327 20 chr17 2017585 2017738 -87486815 - MIR SINE MIR -62 200 1 1947 146 3 33 chr17 2017804 2018106 -87486447 - AluJb SINE Alu -19 293 1 2315 85 11 0 chr17 2018143 2018451 -87486102 + AluSq SINE Alu 1 311 0 1703 128 3 104 chr17 2019705 2020033 -87484520 - AluYa5 SINE Alu -14 297 3 192 40 0 0 chr17 2020943 2020968 -87483585 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2027 135 0 44 chr17 2021215 2021533 -87483020 + AluSx SINE Alu 2 305 -7 1773 152 0 14 chr17 2021538 2021815 -87482738 + AluSx SINE Alu 1 273 -39 336 226 39 10 chr17 2021819 2021921 -87482632 - MIR SINE MIR -48 214 110 2182 126 0 0 chr17 2022150 2022443 -87482110 - AluSx SINE Alu -19 293 1 2101 133 33 0 chr17 2022689 2022990 -87481563 + AluSx SINE Alu 1 311 -1 696 255 115 36 chr17 2023977 2024255 -87480298 - L2 LINE L2 -8 3305 3006 1937 123 37 0 chr17 2024314 2024583 -87479970 - AluJo SINE Alu -33 279 1 2455 55 0 14 chr17 2025102 2025447 -87479106 + AluY SINE Alu 1 341 0 2198 139 0 0 chr17 2025631 2025933 -87478620 - AluJb SINE Alu -10 302 1 1554 157 16 72 chr17 2025933 2026251 -87478302 - AluJb SINE Alu -12 300 1 2344 93 0 7 chr17 2026861 2027161 -87477392 + AluSx SINE Alu 1 298 -14 25 0 0 0 chr17 2027262 2027287 -87477266 + AT_rich Low_complexity Low_complexity 1 25 0 2053 96 8 0 chr17 2027522 2027782 -87476771 + AluSq SINE Alu 1 262 -51 917 26 17 0 chr17 2027782 2027897 -87476656 + (TAAAA)n Simple_repeat Simple_repeat 2 118 0 355 290 22 0 chr17 2028364 2028502 -87476051 + L1ME LINE L1 4771 4911 -1235 1384 192 73 8 chr17 2028636 2028897 -87475656 - AluJo SINE Alu -34 278 1 709 199 18 60 chr17 2028899 2028954 -87475599 + L1ME LINE L1 5087 5143 -1021 1670 181 3 29 chr17 2028954 2029269 -87475284 - AluJo SINE Alu -5 307 1 709 199 18 60 chr17 2029269 2029332 -87475221 + L1ME LINE L1 5143 5207 -957 2198 85 0 75 chr17 2029332 2029651 -87474902 + AluSx SINE Alu 1 295 -17 709 199 18 60 chr17 2029651 2029907 -87474646 + L1ME LINE L1 5207 5442 -722 1023 128 0 0 chr17 2029987 2030128 -87474425 - AluJb SINE Alu -14 298 158 1340 237 101 22 chr17 2030144 2030650 -87473903 + L1ME2 LINE L1 4084 4629 -1517 964 227 123 74 chr17 2030652 2030851 -87473702 + L1ME2 LINE L1 4796 4984 -1180 1881 175 14 0 chr17 2030851 2031143 -87473410 + AluJb SINE Alu 1 296 -16 2201 115 0 3 chr17 2031150 2031438 -87473115 + AluSx SINE Alu 5 291 -21 964 227 123 74 chr17 2031438 2031489 -87473064 + L1ME2 LINE L1 4989 5036 -1128 1288 186 90 21 chr17 2031489 2031779 -87472774 - AluJb SINE Alu -2 310 1 1991 114 30 30 chr17 2031788 2031948 -87472605 - AluSx SINE Alu -14 298 136 2400 94 0 0 chr17 2031948 2032245 -87472308 - AluY SINE Alu -14 297 1 1991 114 30 30 chr17 2032245 2032382 -87472171 - AluSx SINE Alu -175 137 1 2051 127 0 44 chr17 2032387 2032555 -87471998 - AluSx SINE Alu -11 301 152 2357 81 0 3 chr17 2032555 2032850 -87471703 - AluY SINE Alu -17 294 1 2051 127 0 44 chr17 2032850 2032996 -87471557 - AluSx SINE Alu -160 152 1 964 227 123 74 chr17 2032996 2033334 -87471219 + L1ME2 LINE L1 5046 5436 -728 1595 188 31 10 chr17 2033334 2033622 -87470931 + AluJo SINE Alu 1 294 -18 964 227 123 74 chr17 2033622 2033781 -87470772 + L1ME2 LINE L1 5436 5586 -578 1126 144 51 0 chr17 2033787 2033982 -87470571 + MER30 DNA MER1_type 26 230 0 1660 196 50 30 chr17 2033992 2034390 -87470163 + L1ME2 LINE L1 5587 5992 -172 335 274 0 32 chr17 2034404 2034499 -87470054 - L1MC4 LINE L1 -1334 6708 6617 936 151 81 29 chr17 2034512 2034684 -87469869 - AluJb SINE Alu -47 265 85 189 0 0 0 chr17 2034684 2034705 -87469848 + (TTTTC)n Simple_repeat Simple_repeat 2 22 0 1910 121 4 4 chr17 2034710 2034967 -87469586 - AluSx SINE Alu -37 275 19 2527 209 43 34 chr17 2038359 2038521 -87466032 + L1M4 LINE L1 4498 4657 -1489 2129 145 0 0 chr17 2038521 2038825 -87465728 + AluSx SINE Alu 1 304 -8 2527 209 43 34 chr17 2038825 2039297 -87465256 + L1M4 LINE L1 4657 5141 -1005 1962 139 34 0 chr17 2039297 2039592 -87464961 + AluSx SINE Alu 1 305 -7 2527 209 43 34 chr17 2039592 2039630 -87464923 + L1M4 LINE L1 5141 5177 -969 563 193 0 35 chr17 2039630 2039744 -87464809 + AluJb SINE Alu 11 120 -192 408 181 0 0 chr17 2039744 2039827 -87464726 + (CA)n Simple_repeat Simple_repeat 1 83 0 1232 150 0 0 chr17 2039849 2040029 -87464524 + AluJb SINE Alu 132 311 -1 1231 120 89 4 chr17 2040029 2040254 -87464299 + L1MB4 LINE L1 5904 6147 -33 330 22 0 0 chr17 2041138 2041184 -87463369 + L1MB3 LINE L1 6138 6183 0 504 279 8 0 chr17 2041185 2041307 -87463246 - MER3 DNA MER1_type -81 128 6 1812 95 26 0 chr17 2041465 2041763 -87462790 + AluSx SINE Alu 63 366 0 1406 181 102 11 chr17 2041928 2042193 -87462360 + AluJb SINE Alu 1 289 -23 282 333 42 42 chr17 2042202 2042374 -87462179 + L1M4 LINE L1 3852 4026 -2120 2269 124 0 0 chr17 2042374 2042680 -87461873 + AluSx SINE Alu 1 306 -6 282 333 42 42 chr17 2042680 2042768 -87461785 + L1M4 LINE L1 4025 4112 -2034 2683 40 0 3 chr17 2042836 2043140 -87461413 + AluYb8 SINE Alu 5 307 -11 465 213 69 23 chr17 2043154 2043328 -87461225 + L1M4 LINE L1 4378 4559 -1587 1893 74 12 4 chr17 2043620 2043863 -87460690 + AluSg SINE Alu 44 288 -22 304 206 32 90 chr17 2043981 2044136 -87460417 - L1MC5 LINE L1 0 7961 7816 2162 107 0 20 chr17 2044151 2044449 -87460104 - AluSg SINE Alu -18 292 1 2044 125 0 38 chr17 2044628 2044941 -87459612 + AluSx SINE Alu 1 301 -11 517 192 0 0 chr17 2044942 2045020 -87459533 - AluJ/FLAM SINE Alu -232 80 3 560 252 19 44 chr17 2045034 2045193 -87459360 + L2 LINE L2 3156 3310 -3 1118 170 58 0 chr17 2045647 2045835 -87458718 - AluJb SINE Alu -17 295 97 1982 125 4 0 chr17 2045835 2046107 -87458446 + AluSx SINE Alu 24 296 -16 258 260 78 0 chr17 2046308 2046385 -87458168 + MLT1J LTR MaLR 5 87 -424 869 205 0 6 chr17 2046399 2046555 -87457998 - FRAM SINE Alu -25 151 1 456 269 156 48 chr17 2046555 2046908 -87457645 + MLT1J LTR MaLR 75 465 -46 309 300 133 40 chr17 2046935 2047014 -87457539 + MIR SINE MIR 59 129 -133 2007 105 14 14 chr17 2047014 2047299 -87457254 + AluSg SINE Alu 26 310 0 309 300 133 40 chr17 2047299 2047369 -87457184 + MIR SINE MIR 129 222 -40 2309 120 0 0 chr17 2047722 2048030 -87456523 - AluSx SINE Alu -4 308 1 1569 156 40 13 chr17 2048036 2048338 -87456215 - L1MA7 LINE L1 0 6291 5982 762 181 12 6 chr17 2048384 2048544 -87456009 + MER3 DNA MER1_type 5 165 -44 1681 184 25 4 chr17 2048555 2048833 -87455720 - AluJb SINE Alu -28 284 1 426 20 0 0 chr17 2048833 2048847 -87455706 + (TG)n Simple_repeat Simple_repeat 1 65 0 426 20 0 0 chr17 2048847 2048898 -87455655 + (TG)n Simple_repeat Simple_repeat 2 52 0 1961 101 75 0 chr17 2048925 2049193 -87455360 - AluSx SINE Alu -24 288 1 1896 135 3 30 chr17 2049727 2050024 -87454529 + AluJb SINE Alu 1 289 -23 2216 108 7 0 chr17 2052269 2052565 -87451988 - AluSx SINE Alu -9 303 6 2202 107 7 0 chr17 2052584 2052874 -87451679 - AluSx SINE Alu -20 292 1 21 36 0 0 chr17 2053149 2053177 -87451376 + AT_rich Low_complexity Low_complexity 1 28 0 213 39 0 0 chr17 2054813 2054839 -87449714 + (CAAT)n Simple_repeat Simple_repeat 1 26 0 685 188 9 0 chr17 2054972 2055084 -87449469 - MER81 DNA DNA -1 113 1 234 0 0 0 chr17 2055271 2055297 -87449256 + (T)n Simple_repeat Simple_repeat 1 26 0 820 167 0 0 chr17 2055542 2055674 -87448879 + FLAM_C SINE Alu 1 132 -1 2255 107 13 0 chr17 2056675 2056975 -87447578 - AluSq SINE Alu -9 304 1 2294 88 10 0 chr17 2056987 2057281 -87447272 - AluSx SINE Alu -15 297 1 811 221 80 6 chr17 2057338 2057501 -87447052 + FAM SINE Alu 1 175 0 426 272 47 67 chr17 2057526 2057780 -87446773 - L1ME LINE L1 -370 5751 5503 2635 31 0 0 chr17 2057821 2058115 -87446438 - AluY SINE Alu -17 294 1 1869 186 3 0 chr17 2058594 2058900 -87445653 - AluJo SINE Alu -5 307 1 182 61 0 30 chr17 2058904 2058937 -87445616 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1007 83 0 0 chr17 2058937 2059058 -87445495 - AluY SINE Alu -190 121 1 566 240 128 25 chr17 2059062 2059304 -87445249 - L1MC4a LINE L1 -1830 5978 5712 394 296 53 4 chr17 2059320 2059479 -87445074 - L1MC4a LINE L1 -580 5662 5500 753 122 16 0 chr17 2061226 2061349 -87443204 + L1PB1 LINE L1 5742 5866 -285 2335 111 3 3 chr17 2061349 2061656 -87442897 - AluSq SINE Alu -6 307 1 1453 179 4 12 chr17 2062287 2062538 -87442015 + AluJb SINE Alu 1 249 -63 1562 151 4 12 chr17 2070376 2070627 -87433926 + AluJo SINE Alu 30 278 -34 290 197 26 0 chr17 2070630 2070706 -87433847 + GA-rich Low_complexity Low_complexity 3 80 0 1242 211 48 0 chr17 2070850 2071120 -87433433 - MER58B DNA MER1_type -2 339 57 423 0 0 0 chr17 2071151 2071198 -87433355 + (CA)n Simple_repeat Simple_repeat 2 48 0 184 121 45 45 chr17 2071236 2071302 -87433251 + (CAGG)n Simple_repeat Simple_repeat 2 67 0 254 291 8 8 chr17 2071357 2071484 -87433069 + (CA)n Simple_repeat Simple_repeat 1 127 0 1861 169 0 3 chr17 2071485 2071780 -87432773 + AluSx SINE Alu 1 294 -18 2306 118 3 0 chr17 2071781 2072086 -87432467 + AluSq SINE Alu 1 306 -7 2354 98 13 7 chr17 2072086 2072392 -87432161 + AluSx SINE Alu 1 308 -4 207 284 11 21 chr17 2072471 2072566 -87431987 + (CATA)n Simple_repeat Simple_repeat 1 94 0 212 254 11 79 chr17 2072617 2072794 -87431759 + (CAGA)n Simple_repeat Simple_repeat 4 168 0 * 236 234 0 65 chr17 2072693 2072800 -87431753 + (CAGAGA)n Simple_repeat Simple_repeat 1 100 0 323 161 151 21 chr17 2072816 2072909 -87431644 + L1MB3 LINE L1 6079 6183 0 278 333 0 33 chr17 2073064 2073217 -87431336 + G-rich Low_complexity Low_complexity 2 149 0 1810 125 3 97 chr17 2073349 2073678 -87430875 + AluJb SINE Alu 1 298 -14 2244 188 41 46 chr17 2074547 2075131 -87429422 + L1MC4 LINE L1 7462 8042 0 329 323 39 8 chr17 2075990 2076117 -87428436 + MIR SINE MIR 117 247 -15 318 48 0 0 chr17 2076349 2076391 -87428162 + 5S rRNA rRNA 1 42 -79 313 162 118 0 chr17 2076492 2076560 -87427993 + MIR SINE MIR 187 262 0 239 331 74 33 chr17 2078430 2078551 -87426002 - L2 LINE L2 -14 3258 3133 203 241 0 19 chr17 2079519 2079573 -87424980 + G-rich Low_complexity Low_complexity 5 57 0 2075 160 108 5 chr17 2080458 2080846 -87423707 + MSTA LTR MaLR 1 428 0 1399 142 158 24 chr17 2081241 2081495 -87423058 - AluSg1 SINE Alu -21 288 1 266 367 51 25 chr17 2081614 2081810 -87422743 - L2 LINE L2 -493 2821 2621 807 141 0 16 chr17 2081970 2082091 -87422462 + FLAM_C SINE Alu 1 119 -24 216 86 0 0 chr17 2082091 2082126 -87422427 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 194 326 0 0 chr17 2082879 2082925 -87421628 + L2 LINE L2 3140 3185 -87 455 238 90 13 chr17 2083099 2083261 -87421292 - MIR SINE MIR -56 206 34 630 244 34 118 chr17 2083417 2083543 -87421010 + L1MD2 LINE L1 4358 4493 -1653 2134 100 19 32 chr17 2083543 2083852 -87420701 + AluSx SINE Alu 1 305 -7 630 244 34 118 chr17 2083852 2084139 -87420414 + L1MD2 LINE L1 4493 4736 -1410 636 211 55 0 chr17 2084155 2084283 -87420270 + AluJo SINE Alu 2 136 -176 5296 187 25 40 chr17 2084286 2084686 -87419867 + L1MD2 LINE L1 4889 5293 -1066 1794 168 16 10 chr17 2084686 2084995 -87419558 + AluJb SINE Alu 1 311 -1 5296 187 25 40 chr17 2084995 2086083 -87418470 + L1MD2 LINE L1 5293 6349 -10 252 111 0 0 chr17 2086339 2086384 -87418169 + (A)n Simple_repeat Simple_repeat 1 45 0 505 139 0 40 chr17 2086756 2086997 -87417556 + AluJ SINE Alu 2 312 0 21 36 0 0 chr17 2086997 2087025 -87417528 + AT_rich Low_complexity Low_complexity 1 28 0 2048 123 7 10 chr17 2087028 2087321 -87417232 + AluSx SINE Alu 1 292 -20 2205 123 3 0 chr17 2087323 2087623 -87416930 - AluSx SINE Alu -9 303 3 1260 73 6 0 chr17 2087767 2087931 -87416622 - L1PA5 LINE L1 -4 6150 5986 825 169 0 0 chr17 2087946 2088070 -87416483 - FLAM_C SINE Alu -19 124 1 759 150 0 18 chr17 2088114 2088332 -87416221 - AluJb SINE Alu -15 297 2 1927 184 147 42 chr17 2088438 2088820 -87415733 + L1ME1 LINE L1 5143 5484 -682 1689 155 58 0 chr17 2088820 2089098 -87415455 + AluSx SINE Alu 5 298 -14 1927 184 147 42 chr17 2089098 2089146 -87415407 + L1ME1 LINE L1 5484 5526 -640 2263 114 0 0 chr17 2089146 2089443 -87415110 + AluSx SINE Alu 1 297 -15 1927 184 147 42 chr17 2089443 2089661 -87414892 + L1ME1 LINE L1 5526 5828 -338 1640 186 3 14 chr17 2089684 2089974 -87414579 + AluJo SINE Alu 14 300 -12 353 300 50 50 chr17 2090074 2090294 -87414259 - MIR SINE MIR -19 243 24 975 182 0 13 chr17 2091376 2091535 -87413018 - AluJb SINE Alu -22 290 134 1681 198 3 0 chr17 2092086 2092369 -87412184 + AluSx SINE Alu 1 284 -28 2117 105 0 51 chr17 2092474 2092789 -87411764 - AluSx SINE Alu -13 299 1 201 167 0 0 chr17 2093182 2093218 -87411335 + (TA)n Simple_repeat Simple_repeat 1 36 0 1931 166 0 0 chr17 2093218 2093513 -87411040 - AluSx SINE Alu -17 295 1 23 33 0 0 chr17 2093612 2093642 -87410911 + AT_rich Low_complexity Low_complexity 1 30 0 1787 147 48 27 chr17 2093707 2094000 -87410553 + AluJo SINE Alu 1 299 -13 1947 143 0 23 chr17 2094003 2094338 -87410215 + AluSx SINE Alu 1 312 0 22 70 0 0 chr17 2094346 2094389 -87410164 + AT_rich Low_complexity Low_complexity 1 43 0 1648 164 12 53 chr17 2094394 2094717 -87409836 + AluSx SINE Alu 1 310 -2 201 254 0 0 chr17 2094999 2095058 -87409495 + (TA)n Simple_repeat Simple_repeat 1 59 0 943 160 0 18 chr17 2095387 2095556 -87408997 + FRAM SINE Alu 1 166 0 200 398 42 0 chr17 2095982 2096100 -87408453 - L2 LINE L2 -4 3268 3146 1581 181 57 0 chr17 2096304 2096585 -87407968 + AluJb SINE Alu 3 299 -13 1828 128 36 43 chr17 2096613 2096777 -87407776 - AluSx SINE Alu -9 303 140 2199 101 7 3 chr17 2096777 2097064 -87407489 - AluSx SINE Alu -20 292 5 1828 128 36 43 chr17 2097064 2097204 -87407349 - AluSx SINE Alu -172 140 1 198 209 0 0 chr17 2097251 2097294 -87407259 - MIR SINE MIR 0 262 220 793 242 10 48 chr17 2097359 2097644 -87406909 + LTR16A LTR ERVL 107 434 -16 800 178 0 0 chr17 2097682 2097817 -87406736 - FLAM_A SINE Alu 0 142 8 28 0 0 0 chr17 2098161 2098189 -87406364 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr17 2098498 2098521 -87406032 + AT_rich Low_complexity Low_complexity 1 23 0 2502 57 0 7 chr17 2098787 2099088 -87405465 + AluY SINE Alu 1 299 -12 437 212 144 17 chr17 2100413 2100531 -87404022 + MER94 DNA DNA 1 133 -1 213 121 0 0 chr17 2102617 2102650 -87401903 + (CA)n Simple_repeat Simple_repeat 2 34 0 22 56 0 0 chr17 2104594 2104630 -87399923 + AT_rich Low_complexity Low_complexity 1 36 0 239 218 91 18 chr17 2104658 2104823 -87399730 - L1ME4a LINE L1 -33 6088 5912 2266 97 0 7 chr17 2105134 2105444 -87399109 + AluSc SINE Alu 2 309 0 2324 66 11 0 chr17 2105672 2105959 -87398594 + AluY SINE Alu 1 290 -21 1318 160 22 9 chr17 2106181 2106412 -87398141 + L1MC1 LINE L1 6095 6328 -5 182 191 64 0 chr17 2106437 2106484 -87398069 - L2 LINE L2 -3 3310 3261 2132 128 0 0 chr17 2106507 2106819 -87397734 + AluSx SINE Alu 1 312 0 521 266 46 66 chr17 2106849 2106909 -87397644 + L1ME LINE L1 5517 5577 -585 1822 165 0 52 chr17 2106909 2107237 -87397316 + AluJo SINE Alu 1 311 -1 521 266 46 66 chr17 2107237 2107329 -87397224 + L1ME LINE L1 5577 5669 -493 1545 183 68 4 chr17 2107329 2107608 -87396945 - AluJb SINE Alu -15 297 1 521 266 46 66 chr17 2107608 2107753 -87396800 + L1ME LINE L1 5669 5800 -362 1969 133 4 0 chr17 2107753 2108023 -87396530 + AluJo SINE Alu 1 271 -41 521 266 46 66 chr17 2108023 2108042 -87396511 + L1ME LINE L1 5800 5818 -344 302 93 0 0 chr17 2108073 2108116 -87396437 + MADE1 DNA Mariner 2 44 -36 2265 132 91 5 chr17 2108560 2108954 -87395599 + MSTA LTR MaLR 1 428 0 1875 134 35 3 chr17 2109155 2109439 -87395114 - AluSx SINE Alu -19 293 1 939 269 57 61 chr17 2109462 2110142 -87394411 - L2 LINE L2 -5 3308 2625 186 43 0 0 chr17 2111321 2111344 -87393209 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 299 275 62 39 chr17 2111383 2111561 -87392992 + L1MEd LINE L1 5 186 -5933 500 289 98 48 chr17 2111779 2112116 -87392437 + L1MEd LINE L1 860 1179 -1805 324 0 0 0 chr17 2112116 2112152 -87392401 + (CCAA)n Simple_repeat Simple_repeat 2 37 0 500 289 98 48 chr17 2112152 2112595 -87391958 + L1MEd LINE L1 1179 1598 -1386 1740 131 10 89 chr17 2112595 2112908 -87391645 + AluSx SINE Alu 1 288 -24 500 289 98 48 chr17 2112908 2113313 -87391240 + L1MEd LINE L1 1598 2123 -861 * 3578 203 45 62 chr17 2113295 2113426 -87391127 + L1ME1 LINE L1 5187 5319 -847 2147 98 4 0 chr17 2113426 2113702 -87390851 + AluSp SINE Alu 34 310 -3 2004 116 18 4 chr17 2113703 2114017 -87390536 + AluSg SINE Alu 1 318 0 2032 99 0 31 chr17 2114026 2114318 -87390235 + AluSx SINE Alu 14 296 -16 3578 203 45 62 chr17 2114318 2115150 -87389403 + L1ME1 LINE L1 5327 6162 -4 591 233 91 47 chr17 2115221 2115455 -87389098 + L1ME3A LINE L1 5708 5948 -218 2082 135 0 26 chr17 2115458 2115632 -87388921 - AluSx SINE Alu -9 303 139 2275 85 7 10 chr17 2115632 2115927 -87388626 - AluSq SINE Alu -19 294 1 2082 135 0 26 chr17 2115927 2116063 -87388490 - AluSx SINE Alu -173 139 1 228 135 0 0 chr17 2116079 2116116 -87388437 + (CATATA)n Simple_repeat Simple_repeat 4 40 0 387 235 45 68 chr17 2116159 2116291 -87388262 + L1ME3A LINE L1 5965 6093 -77 284 276 97 48 chr17 2116892 2117037 -87387516 + MIR SINE MIR 72 223 -39 2593 80 0 0 chr17 2117304 2117644 -87386909 + AluSx SINE Alu 1 340 0 279 0 0 0 chr17 2117706 2117737 -87386816 + (A)n Simple_repeat Simple_repeat 1 31 0 2257 82 0 4 chr17 2118816 2119097 -87385456 + AluSg SINE Alu 1 280 -30 24 32 0 0 chr17 2119624 2119655 -87384898 + AT_rich Low_complexity Low_complexity 1 31 0 224 304 0 0 chr17 2119913 2119969 -87384584 - L2 LINE L2 -3 3269 3214 23 54 0 0 chr17 2121638 2121675 -87382878 + AT_rich Low_complexity Low_complexity 1 37 0 2095 111 3 3 chr17 2121675 2121963 -87382590 - AluSx SINE Alu -24 288 1 21 36 0 0 chr17 2122095 2122123 -87382430 + AT_rich Low_complexity Low_complexity 1 28 0 1104 129 6 6 chr17 2122123 2122286 -87382267 - AluSg/x SINE Alu -27 283 121 192 40 0 0 chr17 2123163 2123188 -87381365 + (GGGAA)n Simple_repeat Simple_repeat 3 27 0 459 0 0 0 chr17 2124102 2124153 -87380400 + (CA)n Simple_repeat Simple_repeat 1 51 0 2111 93 72 0 chr17 2124490 2124768 -87379785 - AluSq SINE Alu -15 298 1 22 35 0 0 chr17 2126207 2126236 -87378317 + AT_rich Low_complexity Low_complexity 1 29 0 338 174 116 12 chr17 2126797 2126883 -87377670 + L1ME4a LINE L1 5710 5804 -317 419 224 68 20 chr17 2126971 2127118 -87377435 + L1ME4a LINE L1 5944 6097 -24 25 51 0 0 chr17 2127207 2127246 -87377307 + AT_rich Low_complexity Low_complexity 1 39 0 246 273 91 53 chr17 2127896 2128028 -87376525 - MIR3 SINE MIR -1 207 71 270 195 26 52 chr17 2128648 2128725 -87375828 - L3b LINE CR1 -87 1496 1422 825 108 0 25 chr17 2128971 2129091 -87375462 - FLAM_C SINE Alu -16 117 1 898 202 106 5 chr17 2129307 2129505 -87375048 + MER20 DNA MER1_type 2 219 0 2345 67 0 57 chr17 2129631 2129946 -87374607 + AluY SINE Alu 1 297 -14 882 157 119 0 chr17 2129956 2130115 -87374438 + FAM SINE Alu 1 49 0 2089 128 3 0 chr17 2130799 2131088 -87373465 + AluSx SINE Alu 1 290 -22 2001 140 3 0 chr17 2132784 2133084 -87371469 - AluSx SINE Alu -10 302 2 1882 146 3 7 chr17 2133087 2133382 -87371171 - AluJo SINE Alu -18 294 1 471 285 39 0 chr17 2133383 2133513 -87371040 - Charlie8 DNA MER1_type -2278 139 5 2261 99 0 3 chr17 2134064 2134377 -87370176 + AluSq SINE Alu 1 312 -1 222 260 52 39 chr17 2134405 2134482 -87370071 - MIR SINE MIR -99 109 32 185 206 0 0 chr17 2134523 2134557 -87369996 + MIR SINE MIR 65 98 -164 457 231 34 0 chr17 2134615 2134732 -87369821 + L1MC4 LINE L1 7922 8042 0 1935 130 23 0 chr17 2134906 2135206 -87369347 + AluSx SINE Alu 1 307 -5 1941 123 41 0 chr17 2135212 2135330 -87369223 + AluSg SINE Alu 1 113 -197 222 37 0 0 chr17 2135330 2135357 -87369196 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1941 123 41 0 chr17 2135357 2135531 -87369022 + AluSg SINE Alu 113 305 -5 251 275 14 14 chr17 2135604 2135673 -87368880 - MIR3 SINE MIR -129 79 11 2303 51 0 24 chr17 2136292 2136586 -87367967 - AluY SINE Alu -17 294 8 1295 184 3 89 chr17 2136696 2137023 -87367530 - AluJo SINE Alu -12 300 2 1750 158 14 0 chr17 2137793 2138084 -87366469 - AluJo SINE Alu -17 295 1 2314 78 7 0 chr17 2139220 2139529 -87365024 + AluSp SINE Alu 1 311 -2 2121 86 41 0 chr17 2139532 2139824 -87364729 + AluSc SINE Alu 1 304 -5 355 331 35 14 chr17 2139887 2140032 -87364521 + MIR3 SINE MIR 2 149 -59 355 293 67 43 chr17 2140051 2140215 -87364338 - MER5B DNA MER1_type -10 168 1 1740 152 26 69 chr17 2140231 2140520 -87364033 + MER58B DNA MER1_type 9 283 -2137 1956 60 0 8 chr17 2140520 2140808 -87363745 - AluY SINE Alu 0 321 36 1740 152 26 69 chr17 2140808 2140865 -87363688 + MER58B DNA MER1_type 283 341 0 1907 147 0 0 chr17 2141736 2142035 -87362518 - AluSx SINE Alu -13 299 1 341 321 177 55 chr17 2142114 2142441 -87362112 - L2 LINE L2 0 3272 2906 2785 7 0 0 chr17 2142523 2142833 -87361720 + AluY SINE Alu 1 310 -1 333 236 14 0 chr17 2142847 2142919 -87361634 - L2 LINE L2 -561 2753 2681 5330 54 9 6 chr17 2142937 2143624 -87360929 + SVA Other Other 719 1386 0 1578 171 0 43 chr17 2143880 2144184 -87360369 + AluJb SINE Alu 1 291 -21 225 83 0 0 chr17 2144352 2144388 -87360165 + (TATG)n Simple_repeat Simple_repeat 2 37 0 974 108 0 51 chr17 2144390 2144481 -87360072 - AluSg/x SINE Alu -26 283 202 2222 77 20 3 chr17 2144481 2144778 -87359775 - AluSc SINE Alu -7 302 1 974 108 0 51 chr17 2144778 2144843 -87359710 - AluSg/x SINE Alu -107 202 135 359 220 43 26 chr17 2144968 2145094 -87359459 + L2 LINE L2 2764 2952 -361 1991 107 30 3 chr17 2145137 2145436 -87359117 + AluSg SINE Alu 1 307 -3 267 103 0 0 chr17 2145439 2145478 -87359075 + (CA)n Simple_repeat Simple_repeat 2 40 0 472 225 176 7 chr17 2145493 2145635 -87358918 - MIR SINE MIR -10 252 87 1900 140 3 7 chr17 2145674 2145974 -87358579 + AluSx SINE Alu 1 299 -13 1277 164 22 4 chr17 2145981 2146213 -87358340 + AluJo SINE Alu 61 296 -16 1762 130 58 0 chr17 2146219 2146496 -87358057 + AluSg SINE Alu 6 298 -12 1629 118 121 4 chr17 2146823 2147095 -87357458 + AluJb SINE Alu 1 304 -8 2175 105 0 13 chr17 2148113 2148426 -87356127 + AluSx SINE Alu 1 309 -3 2260 82 0 25 chr17 2148426 2148740 -87355813 + AluY SINE Alu 1 307 -4 302 272 12 0 chr17 2148764 2148845 -87355708 + L1ME3A LINE L1 6065 6146 -24 1967 151 0 0 chr17 2152020 2152318 -87352235 + AluSx SINE Alu 1 298 -14 380 222 86 0 chr17 2152557 2152638 -87351915 + MER20B DNA MER1_type 88 175 -608 1934 99 35 0 chr17 2152638 2152922 -87351631 + AluSx SINE Alu 1 294 -18 515 182 159 30 chr17 2153023 2153155 -87351398 - MER58C DNA MER1_type -8 207 59 1292 188 38 24 chr17 2154613 2154900 -87349653 - AluJb SINE Alu -20 292 2 2376 78 0 0 chr17 2155098 2155447 -87349106 - AluY SINE Alu 0 349 1 738 188 8 0 chr17 2155474 2155602 -87348951 - FLAM_C SINE Alu -12 131 3 1862 133 0 41 chr17 2155895 2156030 -87348523 + AluSx SINE Alu 5 144 -168 2205 82 0 3 chr17 2156030 2156322 -87348231 + AluY SINE Alu 1 291 -20 2292 57 0 51 chr17 2156326 2156642 -87347911 + AluY SINE Alu 4 303 -8 1862 133 0 41 chr17 2156642 2156816 -87347737 + AluSx SINE Alu 147 306 -6 348 325 17 8 chr17 2157162 2157279 -87347274 - MIR SINE MIR -88 174 57 1009 168 0 0 chr17 2157283 2157450 -87347103 + FRAM SINE Alu 1 167 -9 1647 181 10 3 chr17 2157730 2158022 -87346531 + AluJo SINE Alu 3 296 -16 516 135 14 0 chr17 2158419 2158493 -87346060 + AluJ/FLAM SINE Alu 2 76 -236 1805 130 91 0 chr17 2158506 2158791 -87345762 - AluSx SINE Alu -1 311 1 2181 110 0 3 chr17 2158832 2159141 -87345412 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr17 2159145 2159166 -87345387 + AT_rich Low_complexity Low_complexity 1 21 0 185 289 0 0 chr17 2159635 2159680 -87344873 + L2 LINE L2 2933 2977 -336 2886 185 25 74 chr17 2159832 2160057 -87344496 - MER82 DNA MER2_type 0 653 418 2168 73 28 0 chr17 2160057 2160343 -87344210 + AluY SINE Alu 1 294 -17 2886 185 25 74 chr17 2160343 2160634 -87343919 - MER82 DNA MER2_type -235 418 177 1800 139 0 32 chr17 2160634 2160779 -87343774 + AluSx SINE Alu 1 149 -163 1688 120 94 0 chr17 2160779 2161054 -87343499 + AluSg SINE Alu 1 301 -9 1800 139 0 32 chr17 2161054 2161218 -87343335 + AluSx SINE Alu 149 300 -12 2886 185 25 74 chr17 2161218 2161387 -87343166 - MER82 DNA MER2_type -476 177 1 1190 197 33 0 chr17 2161428 2161641 -87342912 + MER58A DNA MER1_type 1 220 -4 715 188 0 0 chr17 2162248 2162360 -87342193 + FLAM_C SINE Alu 9 120 -23 2001 128 0 0 chr17 2162540 2162836 -87341717 + AluSx SINE Alu 1 296 -16 1920 127 27 3 chr17 2163794 2164086 -87340467 - AluSp SINE Alu -14 299 1 2297 81 3 0 chr17 2164186 2164481 -87340072 - AluSp SINE Alu -17 296 1 2279 46 11 0 chr17 2164524 2164865 -87339688 - AluY SINE Alu 0 344 1 1641 182 0 10 chr17 2165163 2165459 -87339094 + AluJb SINE Alu 1 293 -19 2238 90 0 7 chr17 2165605 2165905 -87338648 - AluSx SINE Alu -14 298 1 252 269 35 122 chr17 2166022 2166080 -87338473 + L2 LINE L2 2689 2750 -564 655 143 17 0 chr17 2166080 2166199 -87338354 + L1MA4 LINE L1 6169 6289 -11 252 269 35 122 chr17 2166199 2166337 -87338216 + L2 LINE L2 2750 2868 -446 * 725 315 76 60 chr17 2166329 2167151 -87337402 - L2 LINE L2 -2 3270 2453 2259 86 0 7 chr17 2167661 2167963 -87336590 - AluSg SINE Alu -10 300 1 1172 173 122 0 chr17 2168216 2168453 -87336100 + AluJo SINE Alu 16 281 -31 322 141 218 39 chr17 2168466 2168544 -87336009 - AluJb SINE Alu -10 292 201 1399 181 50 11 chr17 2168552 2168829 -87335724 - AluJo SINE Alu -24 288 1 607 307 100 40 chr17 2168829 2169351 -87335202 + L2 LINE L2 2464 3020 -252 223 293 311 0 chr17 2169435 2169541 -87335012 + L2 LINE L2 3174 3312 -1 225 0 0 0 chr17 2169791 2169816 -87334737 + (A)n Simple_repeat Simple_repeat 1 25 0 2132 109 3 0 chr17 2170289 2170583 -87333970 + AluSq SINE Alu 1 295 -18 392 153 0 0 chr17 2170898 2170957 -87333596 - U4 snRNA snRNA -86 59 1 21 0 0 0 chr17 2171750 2171771 -87332782 + AT_rich Low_complexity Low_complexity 1 21 0 237 273 26 0 chr17 2171842 2171919 -87332634 + GA-rich Low_complexity Low_complexity 1 79 0 289 323 139 27 chr17 2172069 2172292 -87332261 + MIR SINE MIR 15 262 0 473 210 49 49 chr17 2172337 2172499 -87332054 + MER104 DNA Tc2 1 162 -18 4796 187 30 30 chr17 2172850 2172957 -87331596 + L1MB2 LINE L1 4280 4386 -1785 624 199 0 57 chr17 2172957 2173069 -87331484 + AluJo/FLAM SINE Alu 1 105 -197 2128 125 0 0 chr17 2173069 2173374 -87331179 - AluSx SINE Alu -7 305 1 624 199 0 57 chr17 2173374 2173402 -87331151 + AluJo/FLAM SINE Alu 105 133 -169 4796 187 30 30 chr17 2173402 2174324 -87330229 + L1MB2 LINE L1 4386 5318 -853 2313 51 41 0 chr17 2174324 2174619 -87329934 - AluYa5 SINE Alu -4 307 1 4796 187 30 30 chr17 2174619 2175430 -87329123 + L1MB2 LINE L1 5318 6128 -43 2097 115 0 0 chr17 2175432 2175728 -87328825 + AluSx SINE Alu 1 296 -16 1788 152 14 7 chr17 2175740 2176037 -87328516 + AluSx SINE Alu 3 301 -11 1768 133 6 60 chr17 2176049 2176198 -87328355 + AluJb SINE Alu 1 126 -186 2564 43 0 0 chr17 2176198 2176501 -87328052 + AluY SINE Alu 1 303 -8 1768 133 6 60 chr17 2176501 2176668 -87327885 + AluJb SINE Alu 126 300 -12 1671 159 3 7 chr17 2176674 2176957 -87327596 + AluJo SINE Alu 1 282 -30 1784 128 17 17 chr17 2177035 2177325 -87327228 + AluSx SINE Alu 2 291 -21 246 62 0 0 chr17 2177337 2177369 -87327184 + (TA)n Simple_repeat Simple_repeat 1 32 0 485 180 172 0 chr17 2177384 2177506 -87327047 + L1M4 LINE L1 5321 5463 -715 2711 196 68 44 chr17 2177506 2178290 -87326263 + L1MB5 LINE L1 4618 5425 -744 836 170 52 72 chr17 2178286 2178450 -87326103 + L1MB5 LINE L1 5893 6054 -120 * 2532 40 0 0 chr17 2178450 2178752 -87325801 + AluY SINE Alu 1 302 -9 836 170 52 72 chr17 2178752 2178781 -87325772 + L1MB5 LINE L1 6054 6082 -92 1185 131 115 37 chr17 2179028 2179272 -87325281 + AluJo SINE Alu 39 301 -11 252 281 176 8 chr17 2180668 2180801 -87323752 + MIR SINE MIR 32 190 -72 1951 122 0 14 chr17 2180883 2181170 -87323383 - AluSx SINE Alu -25 287 5 207 0 0 0 chr17 2181766 2181789 -87322764 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 288 343 50 70 chr17 2181840 2182279 -87322274 + L2 LINE L2 2827 3295 -18 2155 125 3 7 chr17 2182280 2182577 -87321976 - AluSx SINE Alu -16 296 1 356 266 176 38 chr17 2182766 2183033 -87321520 + L2 LINE L2 1698 2001 -1313 354 325 195 22 chr17 2183077 2183823 -87320730 + L2 LINE L2 2203 3082 -190 1038 160 155 0 chr17 2183848 2184042 -87320511 + MER1B DNA MER1_type 1 224 -73 404 169 14 0 chr17 2184040 2184111 -87320442 + MER1B DNA MER1_type 257 328 -5 * 2041 127 0 31 chr17 2184112 2184435 -87320118 + AluSq SINE Alu 1 313 0 315 320 0 0 chr17 2184535 2184613 -87319940 + L2 LINE L2 3194 3271 -1 272 133 17 0 chr17 2184964 2185024 -87319529 + (CA)n Simple_repeat Simple_repeat 2 62 0 2609 64 3 6 chr17 2185838 2186150 -87318403 + AluY SINE Alu 1 311 0 2138 68 0 0 chr17 2188961 2189227 -87315326 + AluY SINE Alu 1 266 -45 1934 152 0 0 chr17 2189371 2189660 -87314893 + AluJo SINE Alu 1 289 -23 2271 81 7 0 chr17 2189662 2189969 -87314584 + AluY SINE Alu 1 309 -2 228 269 0 13 chr17 2190920 2190998 -87313555 + G-rich Low_complexity Low_complexity 2 78 0 203 240 10 42 chr17 2191357 2191453 -87313100 + (CGAGG)n Simple_repeat Simple_repeat 2 94 0 2232 59 31 21 chr17 2191655 2191943 -87312610 - AluSx SINE Alu -21 291 1 977 89 0 41 chr17 2192029 2192175 -87312378 + AluSg/x SINE Alu 155 294 -16 593 299 48 51 chr17 2192791 2193085 -87311468 + HAL1 LINE L1 1116 1408 -1099 2452 79 7 3 chr17 2193095 2193399 -87311154 - AluSq SINE Alu -8 305 1 2082 104 17 3 chr17 2193436 2193725 -87310828 + AluSx SINE Alu 1 293 -19 2365 96 0 0 chr17 2193835 2194136 -87310417 + AluSx SINE Alu 1 301 -11 247 366 0 12 chr17 2194765 2194929 -87309624 + (TGG)n Simple_repeat Simple_repeat 1 162 0 235 264 64 16 chr17 2195476 2195601 -87308952 + L1M4 LINE L1 2873 3003 -3143 209 293 193 14 chr17 2195820 2195960 -87308593 + L2 LINE L2 2301 2465 -849 1692 117 144 4 chr17 2195977 2196233 -87308320 + AluSg1 SINE Alu 1 292 -17 2262 92 7 3 chr17 2196237 2196542 -87308011 + AluSq SINE Alu 1 306 0 807 170 0 0 chr17 2196542 2196663 -87307890 - AluJo SINE Alu -185 127 1 401 211 0 0 chr17 2197660 2197747 -87306806 - L1M3 LINE L1 -517 5639 5565 955 156 65 0 chr17 2197753 2197907 -87306646 - AluJb SINE Alu -148 164 1 1966 144 0 46 chr17 2197964 2198146 -87306407 - AluSx SINE Alu -1 311 149 2519 73 0 0 chr17 2198146 2198446 -87306107 - AluY SINE Alu -11 300 1 1966 144 0 46 chr17 2198446 2198589 -87305964 - AluSx SINE Alu -163 149 1 545 148 176 0 chr17 2198594 2198702 -87305851 - FRAM SINE Alu 0 176 50 1745 168 10 17 chr17 2198754 2199051 -87305502 + AluJb SINE Alu 1 295 -17 1872 175 0 28 chr17 2199328 2199648 -87304905 + AluJo SINE Alu 1 311 -1 420 240 124 46 chr17 2199649 2199715 -87304838 + L1ME4a LINE L1 5369 5428 -693 2237 109 0 0 chr17 2199715 2200008 -87304545 + AluY SINE Alu 2 294 -17 420 240 124 46 chr17 2200008 2200303 -87304250 + L1ME4a LINE L1 5428 5751 -370 830 215 80 6 chr17 2200328 2200491 -87304062 - FAM SINE Alu 0 175 1 2294 88 10 0 chr17 2200548 2200842 -87303711 + AluSx SINE Alu 1 297 -15 2298 106 10 0 chr17 2200854 2201155 -87303398 + AluSq SINE Alu 1 304 -9 241 267 33 33 chr17 2201285 2201405 -87303148 + L1ME4a LINE L1 6000 6119 -2 2252 114 0 7 chr17 2201568 2201702 -87302851 + AluSp SINE Alu 1 134 -179 2671 50 0 0 chr17 2201702 2202004 -87302549 + AluY SINE Alu 1 302 -9 2252 114 0 7 chr17 2202004 2202175 -87302378 + AluSp SINE Alu 134 304 -9 63 36 0 0 chr17 2202228 2202312 -87302241 + AT_rich Low_complexity Low_complexity 1 84 0 2474 74 3 0 chr17 2202362 2202660 -87301893 + AluSg SINE Alu 1 299 -11 199 302 78 35 chr17 2203149 2203265 -87301288 - MIR SINE MIR -32 230 110 188 135 27 0 chr17 2203377 2203414 -87301139 + (TA)n Simple_repeat Simple_repeat 1 38 0 1464 165 149 26 chr17 2203419 2203728 -87300825 + MER7A DNA MER2_type 1 345 -1 1111 117 29 133 chr17 2203948 2203998 -87300555 + AluSq SINE Alu 87 141 -172 1976 141 3 44 chr17 2203998 2204107 -87300446 + AluSx SINE Alu 4 116 -196 2092 76 10 45 chr17 2204107 2204422 -87300131 - AluY SINE Alu 0 305 1 1976 141 3 44 chr17 2204422 2204630 -87299923 + AluSx SINE Alu 116 309 -3 2338 66 0 13 chr17 2204630 2204934 -87299619 + AluY SINE Alu 1 300 -11 1111 117 29 133 chr17 2204934 2205122 -87299431 + AluSq SINE Alu 139 301 -12 194 309 62 0 chr17 2205131 2205212 -87299341 - L2 LINE L2 -775 2539 2454 2039 134 10 19 chr17 2205537 2205850 -87298703 - AluJb SINE Alu -2 310 1 2172 83 35 54 chr17 2205857 2206170 -87298383 - AluY SINE Alu -4 307 1 964 233 185 6 chr17 2206383 2206739 -87297814 + L2 LINE L2 2046 2465 -849 1199 153 42 0 chr17 2206792 2206981 -87297572 - AluJo SINE Alu -115 197 1 1173 258 132 53 chr17 2206983 2207212 -87297341 + L2 LINE L2 2466 2676 -637 2466 82 0 0 chr17 2207212 2207518 -87297035 - AluY SINE Alu -5 306 1 1173 258 132 53 chr17 2207518 2207652 -87296901 + L2 LINE L2 2676 2798 -515 2373 93 7 0 chr17 2207652 2207954 -87296599 - AluSg SINE Alu -6 304 1 2005 146 0 7 chr17 2207961 2208262 -87296291 - AluSx SINE Alu -13 299 1 1173 258 132 53 chr17 2208262 2208646 -87295907 + L2 LINE L2 2803 3313 0 2208 94 7 17 chr17 2209183 2209481 -87295072 - AluSg SINE Alu -15 295 1 889 138 15 0 chr17 2209499 2209629 -87294924 - FLAM_C SINE Alu -11 132 1 2389 58 0 52 chr17 2209903 2210212 -87294341 - AluY SINE Alu -14 297 5 1701 136 0 0 chr17 2210222 2210465 -87294088 - AluSq SINE Alu -70 243 1 904 224 5 14 chr17 2212371 2212581 -87291972 - MER6B DNA MER2_type -2 208 1 2353 96 0 3 chr17 2213009 2213311 -87291242 - AluSg SINE Alu -9 301 1 1050 142 0 0 chr17 2213322 2213477 -87291076 - AluSq SINE Alu -8 305 151 781 164 59 110 chr17 2214078 2214223 -87290330 - AluJo SINE Alu -62 250 99 2290 112 0 0 chr17 2214223 2214519 -87290034 + AluSq SINE Alu 1 296 -17 781 164 59 110 chr17 2214519 2214534 -87290019 - AluJo SINE Alu -213 99 85 1944 162 0 3 chr17 2214534 2214836 -87289717 + AluSx SINE Alu 1 301 -11 781 164 59 110 chr17 2214836 2214893 -87289660 - AluJo SINE Alu -227 85 43 273 307 81 25 chr17 2214913 2215196 -87289357 + L1ME4a LINE L1 5628 5926 -195 2159 112 31 0 chr17 2215369 2215663 -87288890 + AluSx SINE Alu 1 303 -9 813 109 23 62 chr17 2215665 2215793 -87288760 + AluSq/x SINE Alu 1 123 -189 1564 96 0 24 chr17 2215795 2216035 -87288518 + AluSg/x SINE Alu 92 310 0 2652 45 0 13 chr17 2216039 2216348 -87288205 + AluY SINE Alu 5 309 -2 239 147 0 0 chr17 2216411 2216445 -87288108 - Alu SINE Alu -94 39 6 2363 81 3 10 chr17 2217323 2217621 -87286932 - AluSp SINE Alu -17 296 1 2524 142 51 5 chr17 2218738 2219147 -87285406 + MSTA LTR MaLR 1 428 0 2587 67 0 3 chr17 2219955 2220267 -87284286 + AluY SINE Alu 1 311 0 185 347 51 20 chr17 2221625 2221723 -87282830 + L2 LINE L2 3199 3299 -14 195 291 36 0 chr17 2222594 2222649 -87281904 + L2 LINE L2 3200 3256 -16 21 0 0 0 chr17 2222847 2222868 -87281685 + AT_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr17 2224939 2224971 -87279582 + (CGG)n Simple_repeat Simple_repeat 2 33 0 21 89 0 0 chr17 2225213 2225269 -87279284 + GC_rich Low_complexity Low_complexity 1 56 0 23 54 0 0 chr17 2225477 2225514 -87279039 + GC_rich Low_complexity Low_complexity 1 37 0 409 197 171 26 chr17 2225955 2226072 -87278481 + L2 LINE L2 3177 3310 -3 2262 86 0 0 chr17 2226192 2226471 -87278082 + AluSx SINE Alu 16 294 -18 2042 100 3 37 chr17 2226546 2226845 -87277708 + AluSg SINE Alu 1 289 -21 2135 70 56 7 chr17 2226845 2227130 -87277423 + AluY SINE Alu 1 300 -11 2174 82 43 4 chr17 2227525 2227805 -87276748 - AluSc SINE Alu -15 294 4 2401 57 0 13 chr17 2227992 2228293 -87276260 - AluY SINE Alu -13 298 2 1433 110 186 13 chr17 2228529 2228794 -87275759 - AluSg1 SINE Alu 0 306 1 1687 210 120 51 chr17 2229156 2229551 -87275002 + L1ME3A LINE L1 5512 5965 -205 2072 105 6 37 chr17 2229551 2229874 -87274679 + AluSq SINE Alu 1 313 0 1687 210 120 51 chr17 2229874 2230088 -87274465 + L1ME3A LINE L1 5965 6163 -7 2272 86 3 7 chr17 2230119 2230411 -87274142 + AluSx SINE Alu 1 291 -21 395 274 89 30 chr17 2231149 2231284 -87273269 + MER5B DNA MER1_type 1 143 -35 648 151 0 19 chr17 2231286 2231392 -87273161 - MER5A DNA MER1_type -1 188 85 449 301 24 48 chr17 2231967 2232176 -87272377 - L2 LINE L2 -2 3311 3108 525 255 123 19 chr17 2232200 2232412 -87272141 + MIR SINE MIR 22 255 -7 1108 44 7 15 chr17 2232640 2232776 -87271777 + AluSq/x SINE Alu 1 135 -178 2505 42 0 13 chr17 2232776 2233082 -87271471 + AluY SINE Alu 1 302 -9 295 238 69 30 chr17 2233083 2233184 -87271369 - Charlie8 DNA MER1_type -2312 105 1 1590 158 3 38 chr17 2234288 2234580 -87269973 + AluJo SINE Alu 1 282 -30 2062 94 0 14 chr17 2234581 2234895 -87269658 - AluSx SINE Alu 0 310 1 22 0 0 0 chr17 2234898 2234920 -87269633 + AT_rich Low_complexity Low_complexity 1 22 0 701 199 0 15 chr17 2235125 2235261 -87269292 - FLAM_A SINE Alu -1 141 8 434 132 92 0 chr17 2235818 2235894 -87268659 + FLAM SINE Alu 42 124 -19 256 237 129 11 chr17 2236062 2236155 -87268398 + MIR SINE MIR 17 120 -142 1660 117 11 25 chr17 2236256 2236565 -87267988 - AluJb SINE Alu 0 310 6 1993 119 3 7 chr17 2236600 2236893 -87267660 + AluSx SINE Alu 1 292 -20 605 196 110 83 chr17 2236987 2237288 -87267265 + L1MC5 LINE L1 7605 7913 -48 2348 60 0 10 chr17 2237299 2237600 -87266953 - AluY SINE Alu -13 298 1 991 111 7 0 chr17 2237600 2237735 -87266818 - AluSq/x SINE Alu -176 136 1 379 276 39 103 chr17 2237736 2237845 -87266708 - L2 LINE L2 -1635 1679 1591 2134 114 0 25 chr17 2237845 2238161 -87266392 + AluSx SINE Alu 5 312 0 379 276 39 103 chr17 2238161 2238283 -87266270 - L2 LINE L2 -1723 1591 1463 347 271 43 129 chr17 2238289 2238491 -87266062 - MIR SINE MIR -7 255 78 2134 99 0 7 chr17 2238491 2238783 -87265770 + AluSx SINE Alu 6 295 -17 347 271 43 129 chr17 2238783 2238835 -87265718 - MIR SINE MIR -184 78 23 965 145 12 18 chr17 2239168 2239334 -87265219 - AluSx SINE Alu -101 211 47 2682 19 0 6 chr17 2240295 2240608 -87263945 - AluY SINE Alu 0 311 1 419 290 93 52 chr17 2240943 2241017 -87263536 - L1MC4a LINE L1 -1633 6175 6106 1244 192 0 64 chr17 2241017 2241330 -87263223 + AluSx SINE Alu 1 293 -9 419 290 93 52 chr17 2241330 2241448 -87263105 - L1MC4a LINE L1 -1702 6106 5975 1787 174 13 7 chr17 2241455 2241760 -87262793 - AluJo SINE Alu -5 307 1 1006 68 8 8 chr17 2241770 2241902 -87262651 - AluY SINE Alu -179 132 1 500 301 130 17 chr17 2241905 2242326 -87262227 - L1MC4a LINE L1 -344 5822 5497 683 121 16 8 chr17 2244939 2245063 -87259490 + L1PB1 LINE L1 5742 5866 -285 2166 110 3 10 chr17 2245063 2245372 -87259181 - AluSq SINE Alu -6 307 1 1574 180 3 17 chr17 2246005 2246299 -87258254 + AluJb SINE Alu 1 290 -22 2175 87 0 13 chr17 2246444 2246755 -87257798 - AluY SINE Alu 0 311 5 1848 125 3 26 chr17 2247656 2247961 -87256592 + AluSx SINE Alu 4 301 -11 224 296 56 0 chr17 2248218 2248289 -87256264 - MIR3 SINE MIR -50 158 84 328 281 66 33 chr17 2248404 2248525 -87256028 + MIR SINE MIR 17 141 -67 2186 100 7 3 chr17 2253433 2253734 -87250819 - AluSg SINE Alu -8 302 1 285 383 14 16 chr17 2255705 2255855 -87248698 + MIR3 SINE MIR 4 136 -72 223 240 20 0 chr17 2257023 2257073 -87247480 + CT-rich Low_complexity Low_complexity 2 52 0 443 275 54 72 chr17 2259282 2259504 -87245049 + MIR SINE MIR 28 245 -17 248 309 74 9 chr17 2259685 2259793 -87244760 - MIR SINE MIR -60 148 33 190 369 16 41 chr17 2261416 2261538 -87243015 + MIR SINE MIR 83 201 -61 406 239 17 34 chr17 2261605 2261722 -87242831 + MIR SINE MIR 17 131 -77 1677 176 0 22 chr17 2262111 2262430 -87242123 + AluJb SINE Alu 1 312 0 2090 82 0 26 chr17 2265065 2265370 -87239183 + AluSg SINE Alu 1 297 -13 331 282 69 23 chr17 2265893 2266024 -87238529 - MER5B DNA MER1_type 0 178 42 668 172 0 83 chr17 2266027 2266172 -87238381 + FLAM_C SINE Alu 1 133 0 1510 131 173 19 chr17 2266181 2266441 -87238112 + AluSg SINE Alu 1 300 0 185 304 0 0 chr17 2266467 2266513 -87238040 + MER5B DNA MER1_type 131 176 -2 507 148 0 0 chr17 2266796 2266884 -87237669 + (CCCCAG)n Simple_repeat Simple_repeat 3 90 0 192 97 0 0 chr17 2269678 2269709 -87234844 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 1302 186 45 11 chr17 2269709 2269978 -87234575 - AluJo SINE Alu -34 278 1 189 292 62 15 chr17 2270574 2270639 -87233914 + L2 LINE L2 3190 3257 -15 1992 91 0 24 chr17 2270802 2271099 -87233454 - AluSx SINE Alu -22 290 1 378 290 38 26 chr17 2271666 2271837 -87232716 + MIR SINE MIR 38 209 -53 360 64 0 0 chr17 2272573 2272620 -87231933 + (TG)n Simple_repeat Simple_repeat 2 48 0 212 194 11 86 chr17 2275493 2275586 -87228967 + G-rich Low_complexity Low_complexity 2 87 0 2264 100 3 3 chr17 2277308 2277618 -87226935 - AluSp SINE Alu -3 310 1 1372 187 98 32 chr17 2278398 2278714 -87225839 + MER1B DNA MER1_type 1 337 0 2059 79 0 26 chr17 2279057 2279360 -87225193 - AluSx SINE Alu -17 295 1 219 287 44 52 chr17 2279499 2279635 -87224918 - L3b LINE CR1 -134 1449 1315 620 157 8 60 chr17 2279878 2280012 -87224541 - FLAM_A SINE Alu -2 131 5 220 350 29 10 chr17 2280068 2280171 -87224382 + L2 LINE L2 2957 3061 -211 246 185 33 43 chr17 2282019 2282111 -87222442 + G-rich Low_complexity Low_complexity 6 96 0 259 75 0 25 chr17 2282373 2282413 -87222140 + (CA)n Simple_repeat Simple_repeat 1 39 0 308 297 0 43 chr17 2283324 2283462 -87221091 + G-rich Low_complexity Low_complexity 4 135 0 196 260 0 55 chr17 2283721 2283794 -87220759 - L2 LINE L2 -41 3272 3204 203 267 17 17 chr17 2284119 2284179 -87220374 - MIR SINE MIR -71 137 78 209 259 35 12 chr17 2287107 2287192 -87217361 + C-rich Low_complexity Low_complexity 6 92 0 23 68 0 0 chr17 2288915 2288959 -87215594 + GC_rich Low_complexity Low_complexity 1 44 0 205 154 0 58 chr17 2289150 2289202 -87215351 + CT-rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr17 2289286 2289315 -87215238 + GC_rich Low_complexity Low_complexity 1 29 0 26 74 0 0 chr17 2290315 2290369 -87214184 + GC_rich Low_complexity Low_complexity 1 54 0 262 206 44 21 chr17 2290490 2290577 -87213976 - MIR SINE MIR -57 151 87 315 246 0 14 chr17 2291627 2291696 -87212857 + Tigger5 DNA MER2_type 1 68 -2255 2081 91 0 86 chr17 2292242 2292581 -87211972 + AluSx SINE Alu 1 310 -2 2466 84 0 7 chr17 2292929 2293237 -87211316 - AluSx SINE Alu -6 306 1 216 219 31 47 chr17 2293804 2293868 -87210685 - L2 LINE L2 -4 3268 3206 902 220 162 24 chr17 2294053 2294349 -87210204 - MER2 DNA MER2_type -8 337 1 728 147 7 29 chr17 2294636 2294772 -87209781 + FLAM_A SINE Alu 1 133 0 385 286 135 23 chr17 2296078 2296302 -87208251 + L1M4 LINE L1 2915 3113 -3033 2146 89 0 71 chr17 2296302 2296638 -87207915 + AluSx SINE Alu 1 312 0 2417 82 0 0 chr17 2296644 2296938 -87207615 + AluSg SINE Alu 1 294 -16 2767 22 0 16 chr17 2296947 2297263 -87207290 + AluY SINE Alu 1 311 0 385 286 135 23 chr17 2297263 2297312 -87207241 + L1M4 LINE L1 3124 5205 -941 595 165 0 10 chr17 2298296 2298399 -87206154 - FLAM_C SINE Alu -40 103 2 2258 85 10 7 chr17 2298435 2298730 -87205823 - AluSp SINE Alu -17 296 1 2273 49 3 21 chr17 2298755 2299079 -87205474 + AluY SINE Alu 2 320 0 2295 108 0 3 chr17 2299105 2299411 -87205142 + AluSc SINE Alu 1 305 -4 181 246 0 18 chr17 2299901 2299958 -87204595 + L3 LINE CR1 1145 1200 -377 1871 171 0 13 chr17 2300177 2300486 -87204067 - AluJb SINE Alu -7 305 1 523 287 14 0 chr17 2300507 2300650 -87203903 + Charlie8 DNA MER1_type 88 232 -2185 2208 92 3 22 chr17 2300656 2300972 -87203581 - AluSx SINE Alu -2 310 1 2097 102 10 14 chr17 2301084 2301379 -87203174 + AluSq SINE Alu 1 294 -19 21 43 0 0 chr17 2301886 2301909 -87202644 + AT_rich Low_complexity Low_complexity 1 23 0 2249 53 35 11 chr17 2302090 2302373 -87202180 - AluSx SINE Alu -22 290 1 229 230 23 69 chr17 2302726 2302813 -87201740 + MIR SINE MIR 47 129 -133 2422 83 0 13 chr17 2304280 2304593 -87199960 - AluSg SINE Alu -1 309 1 325 260 67 80 chr17 2304775 2304925 -87199628 + L1ME4a LINE L1 5962 6109 -12 2255 88 20 7 chr17 2305876 2306181 -87198372 - AluSx SINE Alu -3 309 1 425 254 135 44 chr17 2306418 2306670 -87197883 + L1ME4a LINE L1 5845 6119 -2 243 0 0 0 chr17 2307020 2307047 -87197506 + (CA)n Simple_repeat Simple_repeat 2 28 0 1998 120 3 20 chr17 2307132 2307431 -87197122 + AluSq SINE Alu 1 294 -19 186 133 0 0 chr17 2309508 2309538 -87195015 + (A)n Simple_repeat Simple_repeat 1 30 0 1417 210 0 30 chr17 2309942 2310247 -87194306 + AluJo SINE Alu 17 312 0 2145 98 0 77 chr17 2310897 2311224 -87193329 + AluSq SINE Alu 2 303 -10 2004 85 48 7 chr17 2311248 2311542 -87193011 - AluSc SINE Alu 0 305 1 1477 112 12 89 chr17 2311574 2311912 -87192641 + AluSx SINE Alu 1 312 0 378 0 0 0 chr17 2312163 2312205 -87192348 + (TG)n Simple_repeat Simple_repeat 2 43 0 2611 0 0 14 chr17 2312991 2313320 -87191233 - AluYa5 SINE Alu 0 325 1 401 204 0 11 chr17 2313367 2313455 -87191098 - AluJ/FLAM SINE Alu -210 92 6 2338 94 0 3 chr17 2313576 2313873 -87190680 + AluY SINE Alu 1 296 -15 189 0 0 0 chr17 2314521 2314542 -87190011 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1515 151 0 4 chr17 2314593 2314818 -87189735 - AluJb SINE Alu -5 307 84 622 216 0 24 chr17 2315148 2315273 -87189280 - FLAM_A SINE Alu -11 122 1 2329 102 0 10 chr17 2315366 2315679 -87188874 + AluSg SINE Alu 1 310 0 310 271 90 48 chr17 2315681 2315773 -87188780 + L1MC4a LINE L1 5882 5986 -1822 1847 142 0 41 chr17 2315773 2316089 -87188464 + AluSx SINE Alu 1 303 -9 310 271 90 48 chr17 2316089 2316162 -87188391 + L1MC4a LINE L1 5986 6054 -1754 813 150 0 16 chr17 2316539 2316666 -87187887 - FLAM_A SINE Alu -10 132 8 1003 143 0 26 chr17 2316764 2316918 -87187635 + AluJb SINE Alu 2 151 -161 282 206 0 0 chr17 2316951 2317014 -87187539 + GA-rich Low_complexity Low_complexity 5 67 0 832 270 64 22 chr17 2317054 2317365 -87187188 + L1MC4 LINE L1 6701 7024 -1018 899 80 0 16 chr17 2317365 2317490 -87187063 + Alu SINE Alu 189 311 0 351 0 0 0 chr17 2317497 2317536 -87187017 + (TA)n Simple_repeat Simple_repeat 2 40 0 867 101 0 43 chr17 2317548 2317686 -87186867 + FLAM_C SINE Alu 2 133 0 1251 168 17 138 chr17 2317737 2317779 -87186774 + L1MC5 LINE L1 6972 7017 -944 2409 91 3 3 chr17 2317779 2318087 -87186466 - AluSp SINE Alu -1 312 5 1251 168 17 138 chr17 2318087 2318135 -87186418 + L1MC5 LINE L1 7017 7069 -892 2206 97 35 0 chr17 2318135 2318424 -87186129 - AluSx SINE Alu -13 299 1 1251 168 17 138 chr17 2318424 2318744 -87185809 + L1MC5 LINE L1 7069 7333 -628 2231 75 0 24 chr17 2318749 2319044 -87185509 - AluSx SINE Alu -14 298 11 1233 153 16 0 chr17 2319058 2319241 -87185312 - AluJo SINE Alu -17 295 110 2552 38 0 19 chr17 2319349 2319662 -87184891 - AluY SINE Alu -4 307 1 22 56 0 0 chr17 2319665 2319701 -87184852 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr17 2319873 2319894 -87184659 + AT_rich Low_complexity Low_complexity 1 21 0 2099 130 0 10 chr17 2319894 2320194 -87184359 - AluSq SINE Alu -16 297 1 1276 210 122 50 chr17 2320195 2320672 -87183881 - L1ME3A LINE L1 -289 5881 5371 23 0 0 0 chr17 2320674 2320697 -87183856 + AT_rich Low_complexity Low_complexity 1 23 0 2164 100 0 32 chr17 2320898 2321207 -87183346 - AluY SINE Alu -12 299 1 1743 165 7 23 chr17 2321244 2321547 -87183006 + AluJb SINE Alu 1 298 -14 527 104 104 0 chr17 2321548 2321644 -87182909 - MER85 DNA T2_type -33 106 1 624 159 102 68 chr17 2321746 2321922 -87182631 - MIR SINE MIR 0 262 81 1914 109 6 61 chr17 2323180 2323492 -87181061 - AluSx SINE Alu -17 295 1 1915 131 0 45 chr17 2325877 2326189 -87178364 - AluJb SINE Alu -12 300 3 2213 126 7 0 chr17 2326551 2326860 -87177693 - AluSx SINE Alu -1 311 1 2269 84 30 7 chr17 2327512 2327809 -87176744 - AluSx SINE Alu -8 304 1 1700 166 0 27 chr17 2328135 2328431 -87176122 - AluJo SINE Alu -24 288 1 193 352 46 0 chr17 2328522 2328630 -87175923 + MIR3 SINE MIR 44 156 -52 31 0 0 0 chr17 2328646 2328677 -87175876 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr17 2328794 2328823 -87175730 + AT_rich Low_complexity Low_complexity 1 29 0 838 150 8 8 chr17 2328927 2329054 -87175499 + AluJo/FLAM SINE Alu 1 127 -185 1254 202 4 50 chr17 2329054 2329277 -87175276 + AluJo SINE Alu 57 268 -44 2459 65 0 3 chr17 2329277 2329570 -87174983 - AluSc SINE Alu -17 292 1 1254 202 4 50 chr17 2329570 2329604 -87174949 + AluJo SINE Alu 268 302 -10 251 176 0 27 chr17 2329610 2329684 -87174869 + L1PB4 LINE L1 4974 5045 -1101 1985 153 7 7 chr17 2329716 2330057 -87174496 + AluJo SINE Alu 5 345 0 1652 196 56 39 chr17 2330068 2330482 -87174071 + L1PB4 LINE L1 5733 6153 -3 180 0 0 0 chr17 2330791 2330811 -87173742 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 672 337 42 12 chr17 2331167 2331502 -87173051 + L1ME1 LINE L1 19 363 -6033 626 219 85 83 chr17 2331494 2331869 -87172684 + L1ME1 LINE L1 3155 3530 -2685 * 1039 161 12 0 chr17 2331869 2332031 -87172522 - AluSg/x SINE Alu -15 295 132 1929 106 66 15 chr17 2332031 2332304 -87172249 - AluSg SINE Alu -17 293 7 732 197 31 44 chr17 2332370 2332523 -87172030 + L1ME1 LINE L1 3588 3739 -2476 2225 89 0 48 chr17 2332523 2332839 -87171714 - AluY SINE Alu -10 301 1 732 197 31 44 chr17 2332839 2332913 -87171640 + L1ME1 LINE L1 3739 3812 -2403 970 150 79 22 chr17 2332914 2333141 -87171412 + L1MA7 LINE L1 5988 6227 -64 1746 153 32 29 chr17 2333141 2333226 -87171327 + MER7C DNA MER2_type 1 84 -2944 1791 119 60 11 chr17 2333226 2333533 -87171020 + AluSx SINE Alu 1 320 0 1746 153 32 29 chr17 2333533 2333759 -87170794 + MER7C DNA MER2_type 84 314 -288 2071 111 0 20 chr17 2333759 2334065 -87170488 - AluSx SINE Alu -12 300 1 617 194 15 30 chr17 2334067 2334201 -87170352 - AluJo/FLAM SINE Alu -170 132 1 1146 150 120 45 chr17 2334203 2334470 -87170083 + MER7C DNA MER2_type 316 602 0 333 108 15 0 chr17 2334470 2334535 -87170018 + L1MA7 LINE L1 6226 6291 0 2170 125 0 3 chr17 2334561 2334850 -87169703 + AluSx SINE Alu 7 294 -18 30 0 0 0 chr17 2334850 2334880 -87169673 + AT_rich Low_complexity Low_complexity 1 30 0 2027 190 21 104 chr17 2334899 2335552 -87169001 + L1ME1 LINE L1 3799 4397 -1818 645 144 0 0 chr17 2335557 2335647 -87168906 + AluSc SINE Alu 2 91 -218 297 0 0 0 chr17 2335647 2335680 -87168873 + (TCTCCC)n Simple_repeat Simple_repeat 5 37 0 4554 87 60 59 chr17 2335686 2336502 -87168051 + SVA Other Other 50 866 -520 1199 82 27 50 chr17 2336531 2336957 -87167596 + SVA Other Other 635 866 -555 5776 52 10 24 chr17 2337028 2337900 -87166653 + SVA Other Other 592 1452 0 1756 73 0 0 chr17 2337900 2338120 -87166433 + AluSc SINE Alu 80 299 -10 1089 193 162 9 chr17 2338132 2338453 -87166100 + L1ME1 LINE L1 4387 4756 -1459 812 164 0 0 chr17 2338454 2338582 -87165971 - FLAM_C SINE Alu -15 128 1 603 217 80 6 chr17 2338602 2338777 -87165776 + L1ME1 LINE L1 4750 4937 -1278 2294 225 130 15 chr17 2338793 2339623 -87164930 + L1ME1 LINE L1 5238 6195 -40 1937 120 7 13 chr17 2340423 2340732 -87163821 + AluSx SINE Alu 4 310 -2 1925 133 31 0 chr17 2340948 2341241 -87163312 + AluJb SINE Alu 1 302 -10 1746 214 107 137 chr17 2341720 2341934 -87162619 - L1MC4 LINE L1 -3 8039 7820 1951 118 3 19 chr17 2341934 2342247 -87162306 - AluSx SINE Alu 0 312 5 1746 214 107 137 chr17 2342247 2343342 -87161211 - L1MC4 LINE L1 -222 7820 6698 1996 119 3 10 chr17 2343665 2343968 -87160585 - AluSx SINE Alu -11 301 1 1115 121 0 6 chr17 2344023 2344189 -87160364 - AluSg/x SINE Alu -10 300 136 2211 90 7 3 chr17 2344193 2344493 -87160060 - AluSx SINE Alu -11 301 1 1667 164 0 17 chr17 2344805 2345095 -87159458 + AluJb SINE Alu 1 287 -25 194 0 0 37 chr17 2345095 2345122 -87159431 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1533 159 29 14 chr17 2345603 2345880 -87158673 - AluJo SINE Alu -29 283 3 830 180 56 11 chr17 2345897 2346075 -87158478 - AluSg/x SINE Alu -6 304 119 2349 54 0 22 chr17 2346167 2346480 -87158073 + AluY SINE Alu 1 306 -5 2153 93 0 17 chr17 2346542 2346843 -87157710 + AluSx SINE Alu 1 296 -16 263 186 129 0 chr17 2346890 2346960 -87157593 - MIR SINE MIR -59 203 125 1689 188 0 0 chr17 2347011 2347298 -87157255 - AluJb SINE Alu -25 287 1 24 0 0 0 chr17 2347520 2347544 -87157009 + AT_rich Low_complexity Low_complexity 1 24 0 1472 173 0 14 chr17 2347553 2347831 -87156722 + AluSx SINE Alu 5 278 -34 243 61 0 0 chr17 2347831 2347864 -87156689 + (CA)n Simple_repeat Simple_repeat 2 34 0 2060 127 3 0 chr17 2347929 2348228 -87156325 - AluJb SINE Alu -10 302 3 235 234 206 28 chr17 2348391 2348498 -87156055 + MIR SINE MIR 17 142 -66 2060 97 3 7 chr17 2348847 2349137 -87155416 + AluSp SINE Alu 1 289 -24 2283 89 0 3 chr17 2349734 2350037 -87154516 + AluSp SINE Alu 1 302 -11 1607 143 0 44 chr17 2350203 2350528 -87154025 + AluSx SINE Alu 1 312 0 2200 93 0 7 chr17 2350711 2351013 -87153540 - AluSx SINE Alu -12 300 1 2559 169 61 21 chr17 2351106 2351591 -87152962 + L1MB2 LINE L1 5621 6130 -41 2137 130 128 16 chr17 2351591 2351975 -87152578 + MSTA LTR MaLR 2 428 0 2559 169 61 21 chr17 2351975 2352011 -87152542 + L1MB2 LINE L1 6130 6163 -8 1925 131 0 19 chr17 2352592 2352906 -87151647 - AluSg SINE Alu -2 308 1 1743 110 27 40 chr17 2352991 2353291 -87151262 + AluSq SINE Alu 1 296 -17 1858 157 23 17 chr17 2353888 2354413 -87150140 + L1M4 LINE L1 4958 5486 -692 2230 83 0 16 chr17 2354416 2354728 -87149825 + AluY SINE Alu 1 307 -4 1500 144 0 32 chr17 2354750 2355028 -87149525 + AluSx SINE Alu 11 279 -33 2190 106 0 7 chr17 2355076 2355379 -87149174 + AluSx SINE Alu 1 301 -11 384 310 76 25 chr17 2355532 2355729 -87148824 + MLT1K LTR MaLR 348 554 -34 864 186 69 0 chr17 2355741 2355929 -87148624 + MER2 DNA MER2_type 9 209 -136 1600 150 36 39 chr17 2355958 2356265 -87148288 - AluJb SINE Alu 0 312 7 286 122 37 183 chr17 2356269 2356351 -87148202 + MER2 DNA MER2_type 273 342 -3 534 223 9 18 chr17 2356402 2356514 -87148039 + FLAM_A SINE Alu 5 115 -27 26 50 0 0 chr17 2356514 2356554 -87147999 + AT_rich Low_complexity Low_complexity 1 40 0 2157 101 0 7 chr17 2356595 2356892 -87147661 - AluSg SINE Alu -15 295 1 1699 172 89 3 chr17 2357106 2357420 -87147133 + MER7A DNA MER2_type 8 346 0 436 215 0 0 chr17 2357420 2357499 -87147054 + MLT1F LTR MaLR 17 95 -472 * 1138 245 50 7 chr17 2357490 2357765 -87146788 + MLT1F LTR MaLR 212 501 -41 1482 200 3 27 chr17 2357765 2358065 -87146488 + AluJo SINE Alu 1 293 -19 2061 122 0 10 chr17 2358120 2358431 -87146122 + AluSx SINE Alu 2 309 -3 237 245 0 0 chr17 2358435 2358488 -87146065 + MLT1F LTR MaLR 490 542 0 603 300 74 65 chr17 2358712 2358986 -87145567 - L1ME4a LINE L1 -95 6026 5756 2338 53 0 30 chr17 2358986 2359290 -87145263 - AluY SINE Alu -16 295 1 1824 125 20 16 chr17 2359290 2359461 -87145092 - AluSx SINE Alu -7 305 130 210 37 0 0 chr17 2359461 2359488 -87145065 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1824 125 20 16 chr17 2359488 2359619 -87144934 - AluSx SINE Alu -182 130 1 603 300 74 65 chr17 2359619 2359913 -87144640 - L1ME4a LINE L1 -364 5757 5452 381 72 0 119 chr17 2360214 2360306 -87144247 - Alu SINE Alu -240 61 1 756 179 0 21 chr17 2360324 2360469 -87144084 - FLAM_C SINE Alu 0 143 2 1248 182 104 7 chr17 2360644 2360780 -87143773 + AluSx SINE Alu 1 122 -190 2232 99 7 0 chr17 2360780 2361083 -87143470 + AluSq SINE Alu 1 305 -8 1248 182 104 7 chr17 2361083 2361215 -87143338 + AluSx SINE Alu 122 295 -17 295 139 0 0 chr17 2361404 2361447 -87143106 + Alu SINE Alu 249 291 -11 204 292 0 0 chr17 2361499 2361547 -87143006 + L2 LINE L2 3223 3270 -2 1873 156 20 0 chr17 2361576 2361877 -87142676 + AluSx SINE Alu 1 307 -5 2223 103 0 0 chr17 2361877 2362188 -87142365 + AluSx SINE Alu 1 311 -1 773 191 157 55 chr17 2362198 2362434 -87142119 - MLT1A1 LTR MaLR -19 346 87 1876 128 14 3 chr17 2362614 2362902 -87141651 - AluSx SINE Alu -21 291 1 2960 213 8 34 chr17 2362992 2363608 -87140945 + MER82 DNA MER2_type 2 601 -52 1535 167 47 7 chr17 2363608 2363884 -87140669 + AluJb SINE Alu 1 287 -25 1025 142 0 11 chr17 2364074 2364250 -87140303 + AluSg/x SINE Alu 139 312 0 485 260 115 35 chr17 2364266 2364466 -87140087 + MIR SINE MIR 20 235 -27 1100 237 67 6 chr17 2364577 2364919 -87139634 + L1MC/D LINE L1 4902 5264 -882 847 138 0 36 chr17 2364919 2365057 -87139496 + AluSq/x SINE Alu 1 133 -180 721 198 35 108 chr17 2365063 2365217 -87139336 + L1MC/D LINE L1 5319 5448 -911 1860 73 84 15 chr17 2365217 2365491 -87139062 + AluY SINE Alu 1 293 -18 721 198 35 108 chr17 2365491 2365594 -87138959 + L1MC/D LINE L1 5448 5557 -802 288 107 321 0 chr17 2365700 2365756 -87138797 + Tigger1 DNA MER2_type 159 232 -2186 795 167 30 0 chr17 2365790 2365922 -87138631 + FRAM SINE Alu 27 162 -14 1590 95 5 5 chr17 2365922 2366144 -87138409 + AluSc SINE Alu 1 222 -87 1479 118 54 71 chr17 2366146 2366272 -87138281 + Tigger1 DNA MER2_type 1454 1581 -837 1386 175 74 7 chr17 2366272 2366557 -87137996 + AluJb SINE Alu 1 304 -8 1479 118 54 71 chr17 2366557 2366619 -87137934 + Tigger1 DNA MER2_type 1581 1643 -775 2234 99 0 0 chr17 2366619 2366922 -87137631 + AluSg SINE Alu 1 303 -7 1479 118 54 71 chr17 2366922 2367028 -87137525 + Tigger1 DNA MER2_type 1643 1744 -674 2048 115 6 13 chr17 2367031 2367318 -87137235 + AluSx SINE Alu 1 287 -25 183 80 0 0 chr17 2367318 2367343 -87137210 + (CA)n Simple_repeat Simple_repeat 2 26 0 2048 115 6 13 chr17 2367343 2367368 -87137185 + AluSx SINE Alu 287 311 -1 1119 97 0 0 chr17 2367601 2367756 -87136797 + AluSg/x SINE Alu 150 304 -8 1433 124 0 10 chr17 2367908 2368109 -87136444 - MER1B DNA MER1_type 0 339 141 2150 92 10 3 chr17 2368553 2368859 -87135694 - AluY SINE Alu -3 308 1 513 103 23 11 chr17 2368875 2368962 -87135591 - AluY SINE Alu -180 131 44 1166 138 0 6 chr17 2369219 2369400 -87135153 + AluSg/x SINE Alu 128 307 -5 21 0 0 0 chr17 2369465 2369486 -87135067 + AT_rich Low_complexity Low_complexity 1 21 0 197 269 128 26 chr17 2370124 2370202 -87134351 + MIR SINE MIR 106 191 -71 366 249 45 104 chr17 2371236 2371311 -87133242 + MER5A DNA MER1_type 1 79 -110 2205 113 0 0 chr17 2371311 2371613 -87132940 + AluSp SINE Alu 1 302 -11 2207 96 7 0 chr17 2371623 2371925 -87132628 + AluSg SINE Alu 1 304 -6 366 249 45 104 chr17 2371925 2372039 -87132514 + MER5A DNA MER1_type 88 189 0 338 319 46 0 chr17 2372181 2372310 -87132243 + L1MC/D LINE L1 5684 5818 -352 1823 118 0 58 chr17 2372322 2372635 -87131918 + AluJb SINE Alu 3 297 -15 1635 86 52 0 chr17 2372639 2372872 -87131681 + AluY SINE Alu 1 245 -66 1370 105 0 10 chr17 2372972 2373172 -87131381 + AluSc SINE Alu 102 299 -10 2074 90 4 4 chr17 2373179 2373456 -87131097 + AluSc SINE Alu 1 277 -32 260 83 21 0 chr17 2373459 2373507 -87131046 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 1688 129 0 0 chr17 2373941 2374181 -87130372 + AluSx SINE Alu 52 291 -21 702 208 120 5 chr17 2374192 2374384 -87130169 + L1ME1 LINE L1 5742 5955 -211 1787 177 0 0 chr17 2374384 2374678 -87129875 + AluJb SINE Alu 1 294 -18 2249 65 24 0 chr17 2374821 2375111 -87129442 - AluY SINE Alu -14 297 1 2173 123 0 0 chr17 2375111 2375419 -87129134 - AluSx SINE Alu -4 308 1 1030 277 89 48 chr17 2375425 2375746 -87128807 - HAL1 LINE L1 0 2507 2201 2203 86 3 10 chr17 2375746 2376049 -87128504 - AluSp SINE Alu -12 301 1 1030 277 89 48 chr17 2376049 2376409 -87128144 - HAL1 LINE L1 -306 2201 1798 365 245 126 7 chr17 2376449 2376592 -87127961 - L1ME4a LINE L1 -16 6105 5946 235 250 18 0 chr17 2376881 2376937 -87127616 + MER3 DNA MER1_type 34 90 -119 * 257 117 33 50 chr17 2376901 2376961 -87127592 - MER3 DNA MER1_type -7 202 144 2023 109 0 36 chr17 2376964 2377267 -87127286 - AluSq SINE Alu -21 292 1 1625 122 0 4 chr17 2377269 2377506 -87127047 - AluSx SINE Alu -23 289 54 984 118 24 18 chr17 2377619 2377789 -87126764 + L1MB4 LINE L1 6009 6179 -1 1568 159 0 53 chr17 2377924 2378256 -87126297 - AluJo SINE Alu 0 316 1 31 26 0 0 chr17 2378520 2378558 -87125995 + AT_rich Low_complexity Low_complexity 1 38 0 205 294 165 0 chr17 2378650 2378759 -87125794 + L2 LINE L2 2442 2568 -746 946 178 146 66 chr17 2378787 2379074 -87125479 - AluJo SINE Alu 0 312 3 327 310 103 54 chr17 2379076 2379337 -87125216 + L2 LINE L2 2616 2889 -425 920 68 0 0 chr17 2379358 2379476 -87125077 - AluSc SINE Alu -17 292 175 284 256 64 76 chr17 2379480 2379652 -87124901 + L2 LINE L2 2941 3110 -162 935 116 123 0 chr17 2379787 2379933 -87124620 - AluSq SINE Alu -149 164 1 501 273 56 0 chr17 2379948 2380109 -87124444 + L1ME LINE L1 5654 5823 -298 1636 71 0 0 chr17 2380110 2380320 -87124233 - AluY SINE Alu -7 304 95 1127 66 0 26 chr17 2380321 2380472 -87124081 - AluY SINE Alu -164 147 1 2221 87 3 7 chr17 2380472 2380772 -87123781 - AluSq SINE Alu -14 299 1 1217 128 0 0 chr17 2382178 2382358 -87122195 - AluSg/x SINE Alu 0 312 133 657 181 60 15 chr17 2382358 2382491 -87122062 + AluJo SINE Alu 14 152 -160 1951 101 3 18 chr17 2382693 2383006 -87121547 + AluSq SINE Alu 4 312 0 2219 96 0 3 chr17 2383862 2384163 -87120390 + AluSg SINE Alu 1 300 -10 405 80 0 0 chr17 2384529 2384579 -87119974 + Alu SINE Alu 1 50 -250 1235 52 0 0 chr17 2384579 2384732 -87119821 + AluY SINE Alu 152 304 -7 363 23 0 0 chr17 2384743 2384787 -87119766 + (CA)n Simple_repeat Simple_repeat 2 45 0 1866 156 0 7 chr17 2384971 2385279 -87119274 - AluJb SINE Alu -6 306 1 394 156 0 0 chr17 2385388 2385452 -87119101 - Alu SINE Alu -3 297 234 1411 116 4 42 chr17 2385553 2385794 -87118759 + AluSg/x SINE Alu 71 302 -8 2242 91 0 0 chr17 2386121 2386419 -87118134 - AluSx SINE Alu -13 299 2 952 152 0 43 chr17 2386439 2386623 -87117930 - AluSg/x SINE Alu 0 312 137 1712 163 27 3 chr17 2386630 2386930 -87117623 - AluJo SINE Alu -5 307 1 341 320 8 40 chr17 2387408 2387533 -87117020 + MIR3 SINE MIR 41 161 -47 232 219 0 0 chr17 2387535 2387576 -87116977 + AluJ/monomer SINE Alu 2 42 -260 2113 109 10 3 chr17 2387576 2387880 -87116673 + AluSx SINE Alu 1 306 -6 332 125 0 0 chr17 2388297 2388353 -87116200 - Alu SINE Alu 0 302 247 351 284 24 16 chr17 2388545 2388672 -87115881 - MLT1L LTR MaLR -2 613 486 314 54 0 0 chr17 2388876 2388913 -87115640 + U2 snRNA snRNA 1 37 -151 2015 97 18 0 chr17 2388992 2389116 -87115437 + AluY SINE Alu 1 121 -209 189 0 0 0 chr17 2389116 2389137 -87115416 + (CA)n Simple_repeat Simple_repeat 2 22 0 2015 97 18 0 chr17 2389137 2389337 -87115216 + AluY SINE Alu 121 330 0 1825 114 11 7 chr17 2389337 2389618 -87114935 + AluSq SINE Alu 1 282 -31 757 122 28 0 chr17 2389664 2389771 -87114782 - FLAM_C SINE Alu -32 111 2 710 249 152 91 chr17 2390014 2390496 -87114057 - MLT1H LTR MaLR 0 549 39 1135 147 0 0 chr17 2390512 2390689 -87113864 + AluSg/x SINE Alu 134 310 0 826 78 5 63 chr17 2391109 2391300 -87113253 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2065 125 3 0 chr17 2391300 2391635 -87112918 - AluSp SINE Alu 0 336 1 24 0 0 0 chr17 2391771 2391795 -87112758 + AT_rich Low_complexity Low_complexity 1 24 0 1964 129 3 10 chr17 2391865 2392160 -87112393 - AluSx SINE Alu -19 293 1 1747 141 7 11 chr17 2392249 2392561 -87111992 - AluSg SINE Alu 0 311 1 675 167 0 111 chr17 2392561 2392573 -87111980 - AluJo SINE Alu -167 145 133 1873 138 0 7 chr17 2392573 2392870 -87111683 - AluSq SINE Alu -18 295 1 675 167 0 111 chr17 2392870 2393019 -87111534 - AluJo SINE Alu -179 133 2 320 314 95 57 chr17 2393562 2393858 -87110695 + L2 LINE L2 2449 2755 -559 392 171 49 12 chr17 2393870 2393952 -87110601 - MIR SINE MIR -5 257 173 316 271 0 24 chr17 2393981 2394066 -87110487 - MIR SINE MIR -178 84 2 1091 314 31 110 chr17 2394295 2394467 -87110086 - AluJo SINE Alu -9 293 156 2245 94 0 3 chr17 2394467 2394765 -87109788 + AluSq SINE Alu 1 297 -16 1091 314 31 110 chr17 2394765 2394910 -87109643 - AluJo SINE Alu -146 156 1 1854 107 21 24 chr17 2395478 2395767 -87108786 + AluSx SINE Alu 2 289 -23 25 31 0 0 chr17 2395771 2395803 -87108750 + AT_rich Low_complexity Low_complexity 1 32 0 325 202 0 138 chr17 2395806 2395915 -87108638 + L1MC4 LINE L1 6615 6708 -1334 298 217 24 36 chr17 2395922 2396173 -87108380 + (TATATG)n Simple_repeat Simple_repeat 1 248 0 2324 87 3 0 chr17 2397181 2397493 -87107060 - AluSp SINE Alu 0 313 1 304 219 144 53 chr17 2397920 2398107 -87106446 - L1MC5 LINE L1 -182 7779 7576 23 0 0 0 chr17 2398132 2398155 -87106398 + AT_rich Low_complexity Low_complexity 1 23 0 1362 97 10 0 chr17 2398246 2398441 -87106112 - AluSp SINE Alu 0 313 117 249 368 34 8 chr17 2398639 2398681 -87105872 - L2 LINE L2 -237 3035 2996 1844 113 17 14 chr17 2398681 2398972 -87105581 + AluSx SINE Alu 1 292 -20 249 368 34 8 chr17 2398972 2399046 -87105507 - L2 LINE L2 -276 2996 2916 391 179 13 13 chr17 2399940 2400018 -87104535 + MIR SINE MIR 184 261 -1 430 340 32 6 chr17 2400227 2400383 -87104170 - MIR SINE MIR -75 187 28 1884 126 41 0 chr17 2400513 2400806 -87103747 - AluSq SINE Alu -8 305 1 2289 83 0 16 chr17 2400963 2401276 -87103277 - AluY SINE Alu -3 308 1 1909 128 3 13 chr17 2401321 2401627 -87102926 - AluSc SINE Alu -6 303 1 2030 135 3 6 chr17 2401627 2401938 -87102615 - AluSx SINE Alu -2 310 1 24 0 0 0 chr17 2402313 2402337 -87102216 + AT_rich Low_complexity Low_complexity 1 24 0 1870 142 3 7 chr17 2402337 2402632 -87101921 - AluJb SINE Alu -18 294 1 1507 139 4 8 chr17 2402648 2402885 -87101668 - MER46A DNA MER2_type 0 236 1 205 190 52 0 chr17 2402892 2402950 -87101603 + (TA)n Simple_repeat Simple_repeat 2 62 0 808 153 79 95 chr17 2403215 2403283 -87101270 + MER5A DNA MER1_type 1 69 -120 2097 100 3 0 chr17 2403283 2403573 -87100980 + AluSg SINE Alu 1 291 -19 808 153 79 95 chr17 2403573 2403694 -87100859 + MER5A DNA MER1_type 69 187 -2 512 141 41 50 chr17 2403714 2403835 -87100718 - L1MC3 LINE L1 -1 7784 7665 298 287 10 30 chr17 2404013 2404114 -87100439 - MIR SINE MIR -66 196 98 1851 152 3 10 chr17 2404151 2404460 -87100093 - AluJo SINE Alu -5 307 1 2219 96 3 0 chr17 2404604 2404916 -87099637 + AluSp SINE Alu 1 313 0 444 299 62 17 chr17 2404945 2405122 -87099431 - MIR SINE MIR -77 185 1 1586 244 99 46 chr17 2405158 2405653 -87098900 + MLT2F LTR ERVL 45 565 -98 1031 141 0 70 chr17 2405653 2405725 -87098828 - Tigger6 DNA MER2_type -3 1594 1519 2060 112 37 0 chr17 2405725 2406020 -87098533 - AluSg SINE Alu -4 306 1 2035 94 33 0 chr17 2406020 2406319 -87098234 - AluY SINE Alu -2 309 1 1031 141 0 70 chr17 2406319 2406430 -87098123 - Tigger6 DNA MER2_type -76 1521 1423 794 96 35 9 chr17 2406452 2406567 -87097986 - AluJb SINE Alu -194 118 1 816 189 9 108 chr17 2406743 2406896 -87097657 - L1M3 LINE L1 -541 5639 5472 755 208 0 0 chr17 2406896 2407026 -87097527 - FLAM_C SINE Alu -2 131 2 2064 125 0 3 chr17 2407032 2407336 -87097217 - AluSq SINE Alu -10 303 1 1939 141 0 13 chr17 2407337 2407682 -87096871 - AluSx SINE Alu 0 312 8 816 189 9 108 chr17 2407682 2407731 -87096822 - L1M3 LINE L1 -712 5468 5449 1622 173 3 14 chr17 2407966 2408261 -87096292 + AluJo SINE Alu 3 294 -18 536 264 8 8 chr17 2408273 2408402 -87096151 - L2 LINE L2 -3 3310 3182 1407 246 28 39 chr17 2408471 2408833 -87095720 + MLT1J LTR MaLR 3 360 -151 1306 193 30 43 chr17 2408842 2409143 -87095410 + AluJo SINE Alu 12 308 -4 199 109 0 43 chr17 2409155 2409201 -87095352 + (GAA)n Simple_repeat Simple_repeat 2 45 0 719 105 0 0 chr17 2409243 2409338 -87095215 - 7SLRNA srpRNA srpRNA -11 309 215 2309 90 6 0 chr17 2409338 2409649 -87094904 - AluSp SINE Alu 0 313 1 1614 111 4 0 chr17 2409649 2409874 -87094679 - 7SLRNA srpRNA srpRNA -93 227 1 266 253 0 13 chr17 2409879 2409954 -87094599 + MLT1J LTR MaLR 412 485 -26 229 268 237 0 chr17 2410014 2410111 -87094442 - L2 LINE L2 -223 3049 2930 977 90 0 8 chr17 2410216 2410350 -87094203 - AluSq/x SINE Alu -180 133 1 1551 173 3 26 chr17 2411142 2411278 -87093275 + AluJo SINE Alu 1 139 -173 2110 109 3 0 chr17 2411278 2411572 -87092981 + AluSg SINE Alu 1 295 -15 2377 59 3 13 chr17 2411574 2411881 -87092672 + AluY SINE Alu 1 304 -7 1551 173 3 26 chr17 2411881 2412048 -87092505 + AluJo SINE Alu 140 300 -12 2213 84 3 3 chr17 2412090 2412387 -87092166 + AluSq SINE Alu 1 297 -16 1426 176 97 38 chr17 2412664 2413004 -87091549 + LTR2B LTR ERV1 32 391 -99 867 45 0 0 chr17 2413022 2413132 -87091421 - SVA Other Other -1 1385 1276 563 136 2 0 chr17 2413134 2413228 -87091325 + LTR2B LTR ERV1 355 490 0 1073 151 0 0 chr17 2413229 2413395 -87091158 - AluSg/x SINE Alu -13 297 132 1520 93 9 0 chr17 2413395 2413609 -87090944 - AluSq SINE Alu -11 302 87 1003 167 0 22 chr17 2413712 2413892 -87090661 + AluSg/x SINE Alu 119 294 -16 1767 168 3 0 chr17 2413953 2414251 -87090302 - AluJb SINE Alu -13 299 1 338 287 103 51 chr17 2414251 2414582 -87089971 + HAL1 LINE L1 25 372 -2135 1933 123 0 16 chr17 2414585 2414894 -87089659 + AluSc SINE Alu 1 304 -5 430 284 83 33 chr17 2414895 2415213 -87089340 + L1MC/D LINE L1 5386 5714 -448 2073 79 7 4 chr17 2415344 2415658 -87088895 + AluSx SINE Alu 1 315 0 233 151 0 38 chr17 2415742 2415770 -87088783 + A-rich Low_complexity Low_complexity 5 32 -23 2296 86 3 3 chr17 2415770 2416083 -87088470 + AluSq SINE Alu 1 313 0 233 151 0 38 chr17 2416083 2416107 -87088446 + A-rich Low_complexity Low_complexity 32 55 0 415 327 35 39 chr17 2416328 2416582 -87087971 + L1M4 LINE L1 4582 4834 -1312 2075 124 0 6 chr17 2416627 2416941 -87087612 + AluSx SINE Alu 1 312 0 1257 102 0 0 chr17 2416941 2417108 -87087445 + AluSq SINE Alu 133 299 -14 974 174 11 16 chr17 2417231 2417421 -87087132 + AluJo SINE Alu 92 280 -32 614 325 13 21 chr17 2417441 2417675 -87086878 + MIR SINE MIR 31 262 0 612 215 23 8 chr17 2417859 2417989 -87086564 - AluSg/x SINE Alu -17 295 164 1263 113 5 5 chr17 2417991 2418177 -87086376 - AluSg/x SINE Alu -8 302 117 2018 119 10 10 chr17 2418293 2418595 -87085958 - AluSx SINE Alu -10 302 1 912 133 20 137 chr17 2418655 2418910 -87085643 + AluJb SINE Alu 87 311 -1 395 129 48 0 chr17 2419230 2419292 -87085261 - AluS SINE Alu -12 288 224 681 158 0 0 chr17 2419292 2419393 -87085160 - AluS SINE Alu -212 101 1 8118 127 143 38 chr17 2419442 2420997 -87083556 - pTR5 LTR ERV1 0 2438 589 999 94 0 0 chr17 2421127 2421254 -87083299 - FLAM_C SINE Alu -6 127 1 272 274 0 0 chr17 2421346 2421408 -87083145 - MIR3 SINE MIR -33 175 114 395 218 118 9 chr17 2421414 2421524 -87083029 - L1M4 LINE L1 -2553 3593 3472 1195 131 4 79 chr17 2421668 2421897 -87082656 + AluSx SINE Alu 1 212 -100 1007 104 0 146 chr17 2421997 2422209 -87082344 + AluJb SINE Alu 125 305 -7 517 348 146 29 chr17 2422218 2422904 -87081649 - L2 LINE L2 -727 2587 1822 1640 152 14 18 chr17 2422904 2423219 -87081334 + AluJo SINE Alu 1 314 0 1529 177 29 35 chr17 2423276 2423457 -87081096 + L1MB2 LINE L1 5651 5832 -339 2167 81 0 37 chr17 2423457 2423780 -87080773 + AluSx SINE Alu 1 311 -1 1529 177 29 35 chr17 2423780 2424025 -87080528 + L1MB2 LINE L1 5832 6171 0 622 164 95 0 chr17 2424297 2424413 -87080140 - FLAM_C SINE Alu 0 143 17 1200 103 0 0 chr17 2424555 2424720 -87079833 + AluSq SINE Alu 1 165 -148 1413 77 31 15 chr17 2424736 2424932 -87079621 + AluSg/x SINE Alu 101 299 -13 377 260 46 51 chr17 2425042 2425238 -87079315 + L1MC4a LINE L1 5711 5905 -1903 2381 66 0 0 chr17 2426776 2427079 -87077474 + AluY SINE Alu 1 303 -8 22 0 0 0 chr17 2427083 2427105 -87077448 + AT_rich Low_complexity Low_complexity 1 22 0 2401 42 0 0 chr17 2427112 2427418 -87077135 + AluY SINE Alu 1 306 0 263 273 68 45 chr17 2427682 2427792 -87076761 - MIR SINE MIR -78 184 69 2145 94 0 25 chr17 2427792 2428110 -87076443 + AluSg SINE Alu 1 310 0 263 273 68 45 chr17 2428110 2428131 -87076422 - MIR SINE MIR -193 69 50 2322 72 7 0 chr17 2428403 2428707 -87075846 + AluY SINE Alu 1 306 -5 1898 155 0 0 chr17 2428727 2429023 -87075530 + AluSq SINE Alu 1 296 -17 5332 142 25 66 chr17 2429023 2430066 -87074487 + L1MC1 LINE L1 5324 6323 -10 512 133 0 0 chr17 2430077 2430160 -87074393 + L1M4b LINE L1 90 172 -6687 189 107 0 0 chr17 2430160 2430188 -87074365 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1076 141 0 6 chr17 2430648 2430818 -87073735 - AluJb SINE Alu -27 285 117 240 86 0 0 chr17 2431268 2431303 -87073250 + (A)n Simple_repeat Simple_repeat 1 35 0 1924 89 23 0 chr17 2431539 2431798 -87072755 + AluSq SINE Alu 1 265 -48 207 0 0 0 chr17 2431803 2431826 -87072727 + (TC)n Simple_repeat Simple_repeat 2 24 0 808 291 160 38 chr17 2432851 2433490 -87071063 - L2 LINE L2 -667 2647 1931 2192 107 0 0 chr17 2433569 2433867 -87070686 + AluSq SINE Alu 1 298 -15 815 112 72 0 chr17 2433956 2434081 -87070472 + AluJo SINE Alu 2 135 -177 21 0 0 0 chr17 2434081 2434102 -87070451 + AT_rich Low_complexity Low_complexity 1 21 0 1194 166 67 9 chr17 2434239 2434462 -87070091 - MER46A DNA MER2_type 0 236 1 543 319 87 0 chr17 2435007 2435222 -87069331 + MIR SINE MIR 24 262 0 2454 188 75 30 chr17 2435371 2435945 -87068608 - L1MB7 LINE L1 0 6184 5585 1282 189 23 36 chr17 2436040 2436366 -87068187 - AluJb SINE Alu 0 312 1 445 269 65 9 chr17 2436689 2436797 -87067756 + MIR SINE MIR 34 147 -61 2254 103 3 0 chr17 2436800 2437111 -87067442 + AluSx SINE Alu 1 312 0 1865 214 156 63 chr17 2437367 2437816 -87066737 + L1MC4 LINE L1 6725 7255 -787 1673 171 0 28 chr17 2437816 2438137 -87066416 + AluSx SINE Alu 1 312 0 1865 214 156 63 chr17 2438137 2438342 -87066211 + L1MC4 LINE L1 7255 7440 -602 437 187 122 0 chr17 2438391 2438498 -87066055 + L1MB7 LINE L1 6049 6168 -16 1036 277 125 49 chr17 2438531 2439079 -87065474 + HAL1b LINE L1 94 714 -634 886 163 141 0 chr17 2439079 2439263 -87065290 - MER6B DNA MER2_type 0 210 1 1036 277 125 49 chr17 2439263 2439450 -87065103 + HAL1b LINE L1 714 885 -463 1647 141 21 34 chr17 2439520 2439811 -87064742 + AluJo SINE Alu 1 287 -25 21 0 0 0 chr17 2439811 2439832 -87064721 + AT_rich Low_complexity Low_complexity 1 21 0 368 252 121 89 chr17 2439833 2440174 -87064379 + L1M4 LINE L1 2137 3422 -2724 234 257 68 14 chr17 2441268 2441342 -87063211 - MER5C DNA MER1_type -245 79 2 2013 125 3 0 chr17 2441391 2441687 -87062866 - AluSq SINE Alu -14 299 3 277 303 8 53 chr17 2441696 2441828 -87062725 - Charlie8 DNA MER1_type -2203 214 89 3070 140 39 14 chr17 2441881 2442395 -87062158 + MER1A DNA MER1_type 1 527 0 790 303 69 69 chr17 2442563 2443072 -87061481 - L2 LINE L2 -1 3312 2804 336 205 24 36 chr17 2443083 2443166 -87061387 + MER94 DNA DNA 1 82 -52 1133 114 0 0 chr17 2443172 2443330 -87061223 - AluSg/x SINE Alu -17 293 136 378 183 16 0 chr17 2443435 2443520 -87061033 - L1P3 LINE L1 -402 5752 5664 442 188 20 2 chr17 2443536 2443787 -87060766 + AluJo SINE Alu 1 295 -17 636 250 152 62 chr17 2444034 2444190 -87060363 + Charlie8 DNA MER1_type 63 204 -2213 691 179 0 15 chr17 2444190 2444324 -87060229 - FLAM_C SINE Alu 0 133 2 636 250 152 62 chr17 2444324 2444535 -87060018 + Charlie8 DNA MER1_type 204 463 -1954 2312 55 3 0 chr17 2444535 2444825 -87059728 - AluSg SINE Alu -19 291 1 1743 161 3 0 chr17 2444854 2445139 -87059414 - AluSx SINE Alu -26 286 1 1243 88 83 6 chr17 2445545 2445726 -87058827 + MER30 DNA MER1_type 1 195 -35 2274 99 0 16 chr17 2446203 2446516 -87058037 + AluSg SINE Alu 1 308 -2 2077 94 17 14 chr17 2447226 2447523 -87057030 - AluSx SINE Alu -14 298 1 193 263 0 0 chr17 2447525 2447563 -87056990 - MIR SINE MIR -78 184 147 318 219 113 86 chr17 2447598 2447636 -87056917 + MER58B DNA MER1_type 4 40 -301 1495 159 21 10 chr17 2447636 2447925 -87056628 - AluJb SINE Alu -20 292 1 318 219 113 86 chr17 2447925 2448037 -87056516 + MER58B DNA MER1_type 40 158 -183 28 29 0 0 chr17 2448041 2448076 -87056477 + AT_rich Low_complexity Low_complexity 1 35 0 298 85 85 0 chr17 2448078 2448125 -87056428 + MER58B DNA MER1_type 150 200 -141 180 0 0 0 chr17 2448165 2448185 -87056368 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 21 36 0 0 chr17 2449006 2449034 -87055519 + AT_rich Low_complexity Low_complexity 1 28 0 1620 143 24 14 chr17 2449037 2449324 -87055229 - AluJo SINE Alu -9 303 14 525 173 136 0 chr17 2449345 2449455 -87055098 + MER58B DNA MER1_type 217 341 0 1222 192 4 54 chr17 2449621 2449881 -87054672 - AluJo SINE Alu -43 269 23 1739 115 64 3 chr17 2450006 2450302 -87054251 - MER2 DNA MER2_type 0 345 32 2155 103 0 0 chr17 2450454 2450754 -87053799 - AluSg SINE Alu -10 300 1 2166 154 26 48 chr17 2451320 2451735 -87052818 - MLT2D LTR ERVL -8 406 1 2305 53 0 33 chr17 2451797 2452097 -87052456 + AluY SINE Alu 1 290 -21 1830 120 0 37 chr17 2452651 2452950 -87051603 + AluSx SINE Alu 1 288 -24 2078 97 0 7 chr17 2452982 2453271 -87051282 + AluSg SINE Alu 1 287 -23 608 205 6 58 chr17 2453617 2453773 -87050780 - AluJo SINE Alu -63 249 102 871 145 47 47 chr17 2453773 2453945 -87050608 - AluJb SINE Alu -140 172 1 1020 222 4 50 chr17 2454204 2454465 -87050088 - AluJo SINE Alu -21 291 43 2105 103 0 7 chr17 2454998 2455288 -87049265 + AluSc SINE Alu 1 288 -21 1498 131 20 3 chr17 2455548 2455802 -87048751 - L1PA13 LINE L1 -14 6149 5845 1209 137 15 5 chr17 2456030 2456234 -87048319 - AluJb SINE Alu 0 312 107 1695 92 9 0 chr17 2456237 2456466 -87048087 - THE1A LTR MaLR 0 355 125 2192 108 3 11 chr17 2456466 2456817 -87047736 + L1PBa LINE L1 2413 2760 -4103 560 178 0 0 chr17 2456919 2457020 -87047533 + AluSg/x SINE Alu 204 304 -8 2262 85 3 13 chr17 2457286 2457593 -87046960 + AluSx SINE Alu 1 304 -8 1593 169 3 3 chr17 2458335 2458625 -87045928 - AluJb SINE Alu -22 290 1 1314 189 13 60 chr17 2458627 2458786 -87045767 - AluJo SINE Alu -14 288 148 1987 125 7 7 chr17 2458786 2459091 -87045462 - AluSx SINE Alu -7 305 1 1314 189 13 60 chr17 2459091 2459232 -87045321 - AluJo SINE Alu -154 148 2 544 126 0 172 chr17 2459244 2459395 -87045158 - FLAM_C SINE Alu -7 126 2 374 247 96 48 chr17 2459483 2459649 -87044904 - MIR SINE MIR -48 214 41 2355 70 0 6 chr17 2459878 2460191 -87044362 + AluY SINE Alu 1 311 0 1394 57 0 0 chr17 2460191 2460367 -87044186 + AluSg/x SINE Alu 132 307 -2 23 33 0 0 chr17 2461029 2461059 -87043494 + GC_rich Low_complexity Low_complexity 1 30 0 252 0 0 0 chr17 2461120 2461148 -87043405 + (CGG)n Simple_repeat Simple_repeat 2 29 0 285 102 51 0 chr17 2461417 2461476 -87043077 + CT-rich Low_complexity Low_complexity 1 62 0 237 200 31 15 chr17 2461635 2461700 -87042853 + CT-rich Low_complexity Low_complexity 2 67 0 2518 170 62 18 chr17 2463651 2464127 -87040426 + L1MB2 LINE L1 5628 6130 -41 2226 131 129 8 chr17 2464127 2464508 -87040045 + MSTA LTR MaLR 2 428 0 2518 170 62 18 chr17 2464508 2464544 -87040009 + L1MB2 LINE L1 6130 6163 -8 277 192 0 0 chr17 2465134 2465186 -87039367 - Alu SINE Alu -2 300 249 480 316 163 37 chr17 2465188 2465678 -87038875 + L2 LINE L2 2736 3270 -2 710 203 16 0 chr17 2465733 2465861 -87038692 - FLAM_A SINE Alu 0 133 4 22 0 0 0 chr17 2466050 2466072 -87038481 + AT_rich Low_complexity Low_complexity 1 22 0 1626 155 4 4 chr17 2466154 2466418 -87038135 - AluSx SINE Alu -14 298 35 2240 92 0 16 chr17 2466665 2466980 -87037573 - AluSx SINE Alu -2 310 1 2088 114 19 0 chr17 2467234 2467541 -87037012 + AluSq SINE Alu 1 313 0 1267 216 36 16 chr17 2467551 2467856 -87036697 + AluJo SINE Alu 1 311 -1 2262 95 0 0 chr17 2467976 2468272 -87036281 + AluSg SINE Alu 1 296 -14 486 307 7 7 chr17 2468396 2468533 -87036020 - MIR3 SINE MIR -25 183 47 1997 86 3 58 chr17 2468787 2469100 -87035453 + AluSq SINE Alu 1 296 -17 2297 163 38 57 chr17 2469179 2469702 -87034851 + L1MB4 LINE L1 5343 5855 -325 334 251 110 64 chr17 2469710 2469929 -87034624 + L1MB7 LINE L1 5642 5870 -314 * 353 231 132 52 chr17 2469917 2470144 -87034409 + L1MB7 LINE L1 5658 5867 -317 225 143 54 18 chr17 2470148 2470204 -87034349 + L1M4 LINE L1 5745 5802 -382 5414 72 24 15 chr17 2470317 2471114 -87033439 + SVA Other Other 65 868 -518 6453 65 13 41 chr17 2471158 2472134 -87032419 + SVA Other Other 433 1381 -5 781 311 138 26 chr17 2472297 2472956 -87031597 + L2 LINE L2 2243 2975 -339 1374 126 36 138 chr17 2473435 2473603 -87030950 + AluJo SINE Alu 3 122 -180 1914 103 3 72 chr17 2473603 2473923 -87030630 + AluSx SINE Alu 1 298 -14 1374 126 36 138 chr17 2473923 2474088 -87030465 + AluJo SINE Alu 122 302 0 966 151 37 55 chr17 2474143 2474361 -87030192 - L1MA4A LINE L1 -4 6299 6086 1000 199 23 14 chr17 2474657 2474873 -87029680 - AluJo SINE Alu -8 304 87 570 253 112 0 chr17 2474876 2475054 -87029499 + L2 LINE L2 3111 3308 -5 2457 54 0 0 chr17 2476312 2476610 -87027943 + AluSx SINE Alu 1 298 -14 694 240 147 62 chr17 2476765 2477002 -87027551 - MLT1H LTR MaLR -16 533 318 2029 88 13 42 chr17 2477002 2477309 -87027244 - AluSq SINE Alu -15 298 1 694 240 147 62 chr17 2477309 2477501 -87027052 - MLT1H LTR MaLR -231 318 30 623 284 72 32 chr17 2477722 2477960 -87026593 + MIR SINE MIR 18 261 -1 26 0 0 0 chr17 2478018 2478044 -87026509 + AT_rich Low_complexity Low_complexity 1 26 0 2026 97 0 7 chr17 2478182 2478489 -87026064 + AluSx SINE Alu 22 312 0 1982 126 10 3 chr17 2479167 2479468 -87025085 + AluSq SINE Alu 4 306 -7 584 174 0 37 chr17 2479561 2479670 -87024883 - AluJb SINE Alu -6 306 202 * 686 126 0 0 chr17 2479669 2479772 -87024781 + AluSg/x SINE Alu 196 298 -11 891 164 0 31 chr17 2480165 2480324 -87024229 + AluJo SINE Alu 1 154 -158 423 133 0 0 chr17 2480330 2480390 -87024163 + AluJb SINE Alu 95 154 -158 1436 142 0 0 chr17 2480396 2480608 -87023945 + AluJb SINE Alu 95 306 -6 209 179 0 90 chr17 2480923 2480990 -87023563 + A-rich Low_complexity Low_complexity 1 61 0 301 211 146 89 chr17 2481187 2481310 -87023243 - MLT1I LTR MaLR -232 177 48 524 115 35 35 chr17 2481418 2481505 -87023048 + L1M3 LINE L1 5583 5669 -514 1009 122 6 6 chr17 2481509 2481665 -87022888 - AluSq SINE Alu -157 156 1 1511 90 10 0 chr17 2482108 2482309 -87022244 - THE1A LTR MaLR -152 203 1 11444 91 10 24 chr17 2482309 2483394 -87021159 - THE1A-int LTR MaLR 0 1580 481 2113 103 37 0 chr17 2483394 2483694 -87020859 - AluY SINE Alu 0 311 1 11444 91 10 24 chr17 2483694 2483767 -87020786 - THE1A-int LTR MaLR -1099 481 408 1849 108 3 42 chr17 2483767 2484074 -87020479 - AluSx SINE Alu -15 297 3 11444 91 10 24 chr17 2484074 2484517 -87020036 - THE1A-int LTR MaLR -1172 408 1 2505 114 14 0 chr17 2484517 2484867 -87019686 - THE1A LTR MaLR 0 355 1 666 185 0 0 chr17 2484870 2484978 -87019575 - FLAM_C SINE Alu -34 109 2 23 54 0 0 chr17 2485138 2485175 -87019378 + AT_rich Low_complexity Low_complexity 1 37 0 1771 140 3 57 chr17 2485780 2486095 -87018458 + AluJo SINE Alu 1 298 -14 2247 101 7 10 chr17 2486105 2486402 -87018151 + AluSx SINE Alu 1 296 -16 2078 100 0 4 chr17 2486706 2486985 -87017568 - AluSg SINE Alu -30 280 3 15429 206 17 13 chr17 2486987 2490990 -87013563 - L1PA12 LINE L1 -752 6832 2822 253 283 65 0 chr17 2490998 2491090 -87013463 + L1ME LINE L1 5727 5824 -297 2301 106 3 6 chr17 2491094 2491406 -87013147 + AluSx SINE Alu 1 311 -1 1033 292 148 7 chr17 2491409 2491998 -87012555 - L1PA12 LINE L1 -6186 1399 728 447 223 133 30 chr17 2492037 2492203 -87012350 - L1MC5 LINE L1 -37 7924 7742 829 175 0 0 chr17 2492220 2492363 -87012190 - FLAM_C SINE Alu 0 143 1 988 208 83 39 chr17 2492363 2492700 -87011853 - L1MC5 LINE L1 -232 7729 7378 1734 167 63 0 chr17 2492701 2493018 -87011535 - MER2 DNA MER2_type 0 345 9 490 134 107 9 chr17 2493027 2493139 -87011414 - L1MC5 LINE L1 -583 7378 7256 2123 127 13 0 chr17 2493295 2493602 -87010951 - AluSq SINE Alu -2 311 1 445 347 115 0 chr17 2493721 2494009 -87010544 + L2 LINE L2 1780 2100 -1214 189 0 0 0 chr17 2494096 2494117 -87010436 + (T)n Simple_repeat Simple_repeat 1 21 0 226 337 111 46 chr17 2494165 2494268 -87010285 + L2 LINE L2 2313 2408 -906 2232 99 3 7 chr17 2494268 2494570 -87009983 - AluSx SINE Alu -11 301 1 226 337 111 46 chr17 2494570 2494772 -87009781 + L2 LINE L2 2408 2638 -676 217 329 21 100 chr17 2494973 2495015 -87009538 + L2 LINE L2 3144 3188 -84 2149 106 17 0 chr17 2495015 2495308 -87009245 + AluSq SINE Alu 1 298 -15 217 329 21 100 chr17 2495308 2495405 -87009148 + L2 LINE L2 3188 3272 0 1799 137 13 27 chr17 2495489 2495789 -87008764 - AluJo SINE Alu -6 306 11 1314 173 57 83 chr17 2495952 2496252 -87008301 + AluJb SINE Alu 1 292 -20 650 154 27 9 chr17 2496584 2496694 -87007859 - AluSx SINE Alu -10 300 189 961 145 0 0 chr17 2496694 2496832 -87007721 - AluSx SINE Alu -174 138 1 1398 194 44 34 chr17 2496865 2497158 -87007395 - AluJo SINE Alu -16 296 1 284 253 0 67 chr17 2497177 2497252 -87007301 + L2 LINE L2 3185 3254 -18 1336 181 58 11 chr17 2497465 2497725 -87006828 + AluJo SINE Alu 28 299 -13 2211 106 0 7 chr17 2498639 2498940 -87005613 - AluSq SINE Alu -14 299 1 2412 74 3 0 chr17 2499033 2499330 -87005223 - AluY SINE Alu -13 298 1 2134 96 0 4 chr17 2499733 2500013 -87004540 - AluSg SINE Alu -16 294 16 22 35 0 0 chr17 2500020 2500049 -87004504 + AT_rich Low_complexity Low_complexity 1 29 0 3383 255 72 50 chr17 2500054 2500584 -87003969 - L1MD3 LINE L1 0 8042 7525 1909 124 0 4 chr17 2500584 2500850 -87003703 - AluSg SINE Alu -13 297 33 3383 255 72 50 chr17 2500850 2501267 -87003286 - L1MD3 LINE L1 -517 7525 7119 2293 96 0 34 chr17 2501267 2501590 -87002963 - AluSx SINE Alu 0 312 1 3383 255 72 50 chr17 2501590 2502009 -87002544 - L1MD3 LINE L1 -923 7119 6659 641 187 193 0 chr17 2502014 2502164 -87002389 - MER20 DNA MER1_type -5 214 36 581 297 112 29 chr17 2502206 2502372 -87002181 - L1MC4a LINE L1 -1208 6600 6449 1647 154 37 85 chr17 2502372 2502749 -87001804 + MER46B DNA MER2_type 2 235 -1 581 297 112 29 chr17 2502749 2503210 -87001343 - L1MC4a LINE L1 -1359 6449 5901 1654 127 0 95 chr17 2503212 2503550 -87001003 - AluJo SINE Alu -6 306 1 770 169 73 15 chr17 2503550 2503686 -87000867 - AluJo SINE Alu -167 145 2 2016 125 3 23 chr17 2503686 2503991 -87000562 - AluSx SINE Alu -13 299 1 1225 171 76 36 chr17 2504034 2504285 -87000268 - AluJo SINE Alu -46 266 6 520 245 12 105 chr17 2504301 2504391 -87000162 - L1MC4a LINE L1 -1926 5882 5785 2192 121 0 3 chr17 2504391 2504698 -86999855 + AluSq SINE Alu 1 306 -7 520 245 12 105 chr17 2504698 2504864 -86999689 - L1MC4a LINE L1 -2023 5785 5650 1826 169 10 0 chr17 2505096 2505392 -86999161 + AluJb SINE Alu 1 299 -13 2094 100 18 0 chr17 2505447 2505728 -86998825 + AluSx SINE Alu 1 286 -26 219 36 0 0 chr17 2505728 2505756 -86998797 + (TA)n Simple_repeat Simple_repeat 2 29 0 2106 90 32 0 chr17 2505756 2506035 -86998518 - AluY SINE Alu -23 288 1 377 307 135 63 chr17 2506043 2506551 -86998002 + L1M4 LINE L1 2870 3340 -2806 1741 115 28 4 chr17 2506551 2506803 -86997750 + AluSx SINE Alu 51 308 -4 377 307 135 63 chr17 2506803 2507081 -86997472 + L1M4 LINE L1 3340 3596 -2550 1635 163 56 24 chr17 2507081 2507199 -86997354 + AluSg SINE Alu 1 114 -196 2035 107 6 50 chr17 2507199 2507516 -86997037 + AluSx SINE Alu 1 303 -9 1635 163 56 24 chr17 2507516 2507685 -86996868 + AluSg SINE Alu 114 297 -13 377 307 135 63 chr17 2507685 2507783 -86996770 + L1M4 LINE L1 3596 3685 -2461 2453 102 26 50 chr17 2507783 2507854 -86996699 - THE1C LTR MaLR 0 375 304 2224 82 7 0 chr17 2507854 2508161 -86996392 + AluY SINE Alu 1 309 0 2453 102 26 50 chr17 2508161 2508472 -86996081 - THE1C LTR MaLR -71 304 1 377 307 135 63 chr17 2508472 2508526 -86996027 + L1M4 LINE L1 3685 3734 -2412 2059 137 0 3 chr17 2508526 2508825 -86995728 + AluSx SINE Alu 1 298 -14 377 307 135 63 chr17 2508825 2509142 -86995411 + L1M4 LINE L1 3734 4219 -1927 910 138 13 38 chr17 2509205 2509364 -86995189 + AluSg/x SINE Alu 144 298 -12 2053 123 7 10 chr17 2509422 2509724 -86994829 + AluSx SINE Alu 1 301 -11 271 262 60 27 chr17 2509751 2509900 -86994653 + L1M4 LINE L1 4505 4658 -1488 24 0 0 0 chr17 2509903 2509927 -86994626 + AT_rich Low_complexity Low_complexity 1 24 0 232 189 19 0 chr17 2510159 2510212 -86994341 + L1M4 LINE L1 5115 5168 -978 991 165 215 58 chr17 2510234 2510361 -86994192 + AluJb SINE Alu 1 107 -195 2262 111 0 0 chr17 2510361 2510658 -86993895 + AluSx SINE Alu 1 297 -15 991 165 215 58 chr17 2510658 2510791 -86993762 + AluJb SINE Alu 107 302 0 1999 132 0 26 chr17 2511426 2511736 -86992817 + AluSx SINE Alu 1 302 -10 1915 168 93 26 chr17 2511875 2512261 -86992292 - L1MC2 LINE L1 -71 6273 5855 2484 51 3 16 chr17 2512261 2512572 -86991981 + AluY SINE Alu 1 307 -4 1915 168 93 26 chr17 2512572 2512603 -86991950 - L1MC2 LINE L1 -489 5855 5828 5885 46 3 5 chr17 2512888 2513562 -86990991 + L1PA5 LINE L1 5481 6153 -1 2149 107 3 28 chr17 2513919 2514238 -86990315 - AluY SINE Alu 0 311 1 1868 130 60 0 chr17 2514322 2514606 -86989947 - AluSq SINE Alu -12 301 1 1825 174 0 0 chr17 2514775 2515073 -86989480 - AluJb SINE Alu -14 298 1 760 165 126 77 chr17 2515073 2515255 -86989298 - AluJo SINE Alu -3 309 119 297 0 0 0 chr17 2515315 2515348 -86989205 + (TG)n Simple_repeat Simple_repeat 2 34 0 1408 171 121 11 chr17 2515523 2515787 -86988766 + AluSg SINE Alu 1 293 -17 517 200 0 0 chr17 2515810 2515905 -86988648 + U13 snRNA snRNA 1 95 -9 2267 95 3 10 chr17 2516049 2516355 -86988198 - AluSg SINE Alu -6 304 1 1175 168 25 15 chr17 2516383 2516580 -86987973 + AluJo SINE Alu 83 281 -31 861 96 0 0 chr17 2517061 2517176 -86987377 - AluY SINE Alu -20 291 177 2036 127 3 7 chr17 2517376 2517675 -86986878 - AluSx SINE Alu -14 298 1 1976 133 28 0 chr17 2519103 2519388 -86985165 + AluSx SINE Alu 1 293 -19 2082 102 56 0 chr17 2519388 2519673 -86984880 + AluSc SINE Alu 1 301 -8 1953 126 14 20 chr17 2519682 2519975 -86984578 + AluSx SINE Alu 1 291 -21 6482 90 60 6 chr17 2520362 2521776 -86982777 - L1PA8 LINE L1 0 6172 4675 1552 103 210 4 chr17 2521945 2522197 -86982356 + AluY SINE Alu 1 304 -7 2071 121 0 37 chr17 2522469 2522510 -86982043 - AluSx SINE Alu -2 310 269 414 0 0 0 chr17 2522510 2522556 -86981997 + (TG)n Simple_repeat Simple_repeat 1 46 0 2071 121 0 37 chr17 2522556 2522836 -86981717 - AluSx SINE Alu -43 269 1 2212 106 3 10 chr17 2522960 2523261 -86981292 + AluSp SINE Alu 1 299 -14 1019 109 0 0 chr17 2523262 2523400 -86981153 + AluY SINE Alu 135 272 -39 824 211 0 0 chr17 2523507 2523673 -86980880 - AluJb SINE Alu 0 312 147 2193 110 10 0 chr17 2523833 2524124 -86980429 - AluSg SINE Alu -16 294 1 668 88 0 0 chr17 2524125 2524205 -86980348 - AluSg1 SINE Alu -223 86 7 1103 141 0 0 chr17 2524375 2524538 -86980015 - AluSp SINE Alu -14 299 137 1817 93 4 0 chr17 2524539 2524775 -86979778 - AluSg SINE Alu -14 296 60 312 27 0 0 chr17 2524797 2524834 -86979719 + (TC)n Simple_repeat Simple_repeat 1 37 0 313 208 0 0 chr17 2524842 2524895 -86979658 + Tigger4(Zombi) DNA MER2_type 2679 2731 0 2395 91 7 7 chr17 2525722 2526031 -86978522 - AluSx SINE Alu -3 309 1 381 231 20 121 chr17 2526541 2526740 -86977813 + MIR SINE MIR 84 262 0 974 67 0 0 chr17 2527357 2527476 -86977077 + AluY SINE Alu 174 292 -19 2054 99 14 3 chr17 2528174 2528458 -86976095 + AluSx SINE Alu 1 287 -25 1864 147 31 0 chr17 2528536 2528822 -86975731 + AluJo SINE Alu 1 295 -17 2267 58 0 7 chr17 2528825 2529100 -86975453 + AluY SINE Alu 1 273 -38 258 286 64 64 chr17 2529205 2529376 -86975177 + L1ME LINE L1 5552 5722 -399 2110 92 27 7 chr17 2529397 2529690 -86974863 - AluSq SINE Alu -14 299 1 248 217 0 36 chr17 2529878 2529961 -86974592 + CT-rich Low_complexity Low_complexity 4 83 0 495 276 173 5 chr17 2530949 2531134 -86973419 + MIR SINE MIR 31 246 -16 2240 83 13 17 chr17 2531323 2531623 -86972930 - AluSg SINE Alu 0 310 12 2221 128 0 0 chr17 2531728 2532034 -86972519 - AluSx SINE Alu -6 306 1 1768 165 0 49 chr17 2532117 2532444 -86972109 + AluJo SINE Alu 1 311 -1 2283 102 7 0 chr17 2532919 2533214 -86971339 + AluSq SINE Alu 1 297 -16 2676 27 0 0 chr17 2533489 2533788 -86970765 + AluY SINE Alu 1 299 -12 22 0 0 0 chr17 2534808 2534830 -86969723 + AT_rich Low_complexity Low_complexity 1 22 0 681 208 0 17 chr17 2534994 2535114 -86969439 + FLAM_A SINE Alu 5 122 -11 1973 136 10 7 chr17 2535139 2535434 -86969119 - AluSx SINE Alu -16 296 1 827 83 101 0 chr17 2535656 2535765 -86968788 + AluJo SINE Alu 6 125 -187 1112 152 0 17 chr17 2535806 2535984 -86968569 + AluJo SINE Alu 120 294 -18 2172 106 0 28 chr17 2536223 2536543 -86968010 + AluSx SINE Alu 1 311 -1 2307 54 34 3 chr17 2537012 2537306 -86967247 + AluY SINE Alu 1 303 -8 2330 71 0 0 chr17 2537704 2538023 -86966530 + AluY SINE Alu 1 311 0 2142 118 0 31 chr17 2538106 2538251 -86966302 + AluSx SINE Alu 1 149 -163 2231 90 10 3 chr17 2538251 2538551 -86966002 + AluSp SINE Alu 1 302 -11 2142 118 0 31 chr17 2538551 2538727 -86965826 + AluSx SINE Alu 149 312 0 1624 163 41 34 chr17 2538737 2539031 -86965522 + AluJo SINE Alu 1 296 -16 696 251 6 0 chr17 2539042 2539213 -86965340 + MER3 DNA MER1_type 38 209 0 1146 112 0 0 chr17 2539457 2539803 -86964750 + (TGGA)n Simple_repeat Simple_repeat 1 346 0 519 288 123 27 chr17 2539812 2540219 -86964334 - L1MC4 LINE L1 -48 7994 7549 252 299 126 0 chr17 2540960 2541047 -86963506 + MIR SINE MIR 153 250 -12 2078 131 3 0 chr17 2541087 2541384 -86963169 + 7SLRNA srpRNA srpRNA 18 315 -5 1102 133 20 64 chr17 2541617 2541820 -86962733 - AluJb SINE Alu -32 280 87 186 43 0 0 chr17 2543692 2543715 -86960838 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 261 0 0 0 chr17 2545754 2545783 -86958770 + (T)n Simple_repeat Simple_repeat 1 29 0 926 98 0 8 chr17 2546132 2546265 -86958288 + FLAM_C SINE Alu 2 133 0 1916 143 10 10 chr17 2546580 2546888 -86957665 + AluSq SINE Alu 1 308 -5 346 266 148 30 chr17 2547215 2547384 -86957169 + MER5A DNA MER1_type 1 189 0 2245 103 0 0 chr17 2547483 2547784 -86956769 - AluSg SINE Alu -9 301 1 2017 104 0 11 chr17 2548106 2548385 -86956168 - AluSq SINE Alu -37 276 1 2009 101 3 0 chr17 2551413 2551700 -86952853 + AluSg SINE Alu 1 288 -22 304 30 60 30 chr17 2552062 2552129 -86952424 + (CCCCCG)n Simple_repeat Simple_repeat 5 73 0 1633 130 0 0 chr17 2553298 2553551 -86951002 + AluSx SINE Alu 54 306 0 183 209 47 0 chr17 2556120 2556163 -86948390 + MIR SINE MIR 103 147 -115 2327 74 7 3 chr17 2557249 2557548 -86947005 + AluSp SINE Alu 1 300 -13 185 171 29 0 chr17 2558841 2558876 -86945677 + MIR SINE MIR 112 147 -61 2076 123 0 10 chr17 2558893 2559202 -86945351 + AluSx SINE Alu 1 306 -6 1789 147 0 14 chr17 2559466 2559759 -86944794 - AluJb SINE Alu -23 289 1 2246 104 0 0 chr17 2559763 2560061 -86944492 - AluSg SINE Alu -12 298 1 2328 88 0 3 chr17 2562949 2563257 -86941296 - AluSq SINE Alu -6 307 1 344 312 33 45 chr17 2564075 2564251 -86940302 - MIR3 SINE MIR 0 208 35 245 260 146 32 chr17 2564317 2564440 -86940113 + MIR SINE MIR 47 184 -24 187 291 157 22 chr17 2566435 2566569 -86937984 - MIR3 SINE MIR -34 174 23 236 219 31 31 chr17 2568620 2568684 -86935869 - MIR SINE MIR -118 144 81 306 186 4 35 chr17 2570255 2570339 -86934214 + MIR SINE MIR 49 126 -82 214 158 42 63 chr17 2571633 2571728 -86932825 + (CCCG)n Simple_repeat Simple_repeat 4 96 0 225 226 312 0 chr17 2572485 2572571 -86931982 - MIR SINE MIR -49 159 49 1631 106 21 100 chr17 2572975 2573304 -86931249 + AluJo SINE Alu 1 303 -9 2338 67 7 0 chr17 2573304 2573601 -86930952 + AluSq SINE Alu 1 300 -13 358 246 40 43 chr17 2573632 2573799 -86930754 + L1MC4 LINE L1 1959 6985 -1337 260 254 103 11 chr17 2573823 2574004 -86930549 - L1MC4a LINE L1 -507 5826 5729 2016 135 26 0 chr17 2574178 2574481 -86930072 + AluJb SINE Alu 1 311 -1 2087 103 3 0 chr17 2574605 2574895 -86929658 - AluSx SINE Alu -21 291 1 484 286 0 0 chr17 2574972 2575098 -86929455 + MER94 DNA DNA 1 126 -8 2299 93 3 0 chr17 2575135 2575437 -86929116 - AluSg SINE Alu -7 303 1 195 411 56 0 chr17 2575440 2575530 -86929023 + L2 LINE L2 3155 3249 -23 960 195 0 0 chr17 2575535 2575704 -86928849 - FRAM SINE Alu -4 172 4 1723 75 6 177 chr17 2575830 2576197 -86928356 - AluSp SINE Alu 0 308 1 2152 110 7 0 chr17 2576482 2576790 -86927763 + AluSx SINE Alu 1 310 -2 335 194 10 126 chr17 2577245 2577313 -86927240 + MIR3 SINE MIR 112 186 -22 1784 124 10 59 chr17 2577313 2577619 -86926934 + AluSx SINE Alu 1 291 -21 2328 71 7 0 chr17 2577620 2577915 -86926638 + AluY SINE Alu 1 297 -14 335 194 10 126 chr17 2577915 2577947 -86926606 + MIR3 SINE MIR 185 202 -6 2120 136 0 0 chr17 2578042 2578350 -86926203 - AluSx SINE Alu -4 308 1 241 195 0 0 chr17 2578619 2578660 -86925893 + Alu SINE Alu 240 280 -22 636 171 0 18 chr17 2578714 2578825 -86925728 + FLAM_A SINE Alu 20 128 -14 2035 122 30 0 chr17 2578826 2579130 -86925423 + AluSp SINE Alu 1 313 0 516 210 129 47 chr17 2579155 2579267 -86925286 - MLT1K LTR MaLR -66 522 421 2191 107 0 7 chr17 2579267 2579575 -86924978 - AluSg SINE Alu -4 306 1 516 210 129 47 chr17 2579575 2579695 -86924858 - MLT1K LTR MaLR -167 421 271 288 299 13 0 chr17 2579753 2579830 -86924723 - MLT1K LTR MaLR -318 270 193 2204 97 7 3 chr17 2580465 2580763 -86923790 - AluSx SINE Alu -13 299 1 2489 53 0 3 chr17 2583318 2583622 -86920931 - AluSq SINE Alu -10 303 1 27 116 0 0 chr17 2584709 2584855 -86919698 + GC_rich Low_complexity Low_complexity 1 146 0 2173 93 0 31 chr17 2585222 2585543 -86919010 + AluSx SINE Alu 1 311 -1 551 320 82 42 chr17 2585709 2586087 -86918466 - L2 LINE L2 -1 3271 2879 2147 84 3 72 chr17 2586118 2586314 -86918239 - AluSx SINE Alu -3 309 144 2360 60 0 17 chr17 2586314 2586613 -86917940 - AluY SINE Alu -17 294 1 2147 84 3 72 chr17 2586613 2586748 -86917805 - AluSx SINE Alu -168 144 1 2048 108 10 14 chr17 2586748 2587044 -86917509 - AluSg SINE Alu -15 295 1 1433 168 119 0 chr17 2587045 2587313 -86917240 - AluJo SINE Alu -12 300 1 591 328 6 0 chr17 2587363 2587540 -86917013 + MER5B DNA MER1_type 1 178 0 2354 90 0 6 chr17 2587675 2587987 -86916566 + AluSg SINE Alu 1 310 0 800 145 0 36 chr17 2588017 2588155 -86916398 + FRAM SINE Alu 28 160 -16 1397 174 68 14 chr17 2588176 2588457 -86916096 + AluJb SINE Alu 1 296 -16 2430 49 13 0 chr17 2588457 2588763 -86915790 + AluY SINE Alu 1 310 -1 24 0 0 0 chr17 2589159 2589183 -86915370 + AT_rich Low_complexity Low_complexity 1 24 0 804 169 0 0 chr17 2589184 2589302 -86915251 - FLAM_C SINE Alu -24 119 2 2185 88 0 13 chr17 2589340 2589646 -86914907 + AluSx SINE Alu 1 302 -10 725 196 55 0 chr17 2589767 2589930 -86914623 - L1MB2 LINE L1 -5 6166 5995 259 283 0 0 chr17 2590274 2590334 -86914219 + MER91A DNA MER1_type 4 63 -133 210 200 71 94 chr17 2590368 2590453 -86914100 + MER91A DNA MER1_type 18 100 -96 378 0 0 0 chr17 2590653 2590695 -86913858 + (TG)n Simple_repeat Simple_repeat 1 42 0 216 0 0 0 chr17 2590694 2590718 -86913835 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 526 207 18 0 chr17 2592099 2592210 -86912343 + MIR SINE MIR 80 192 -70 2118 118 0 0 chr17 2592566 2592863 -86911690 + AluSx SINE Alu 1 297 -15 2441 47 0 10 chr17 2592863 2593209 -86911344 + AluY SINE Alu 1 311 0 2522 58 3 0 chr17 2593380 2593690 -86910863 - AluSp SINE Alu -2 311 1 2424 76 0 6 chr17 2593876 2594191 -86910362 - AluSp SINE Alu 0 313 1 215 299 29 135 chr17 2594266 2594540 -86910013 + L2 LINE L2 2919 3163 -109 2179 99 3 0 chr17 2594626 2594919 -86909634 - AluY SINE Alu -17 294 1 185 211 0 0 chr17 2595495 2595533 -86909020 - MIR SINE MIR -61 147 110 2166 115 0 0 chr17 2595564 2595860 -86908693 - AluSx SINE Alu -14 298 3 530 236 38 25 chr17 2595925 2596082 -86908471 + MIR3 SINE MIR 35 193 -15 2043 108 3 0 chr17 2596279 2596566 -86907987 + AluSg SINE Alu 1 288 -22 216 0 0 0 chr17 2596566 2596590 -86907963 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 804 165 0 0 chr17 2596597 2596718 -86907835 + FLAM_C SINE Alu 2 122 -21 1928 122 10 10 chr17 2596730 2597087 -86907466 + AluSx SINE Alu 1 312 0 2450 48 10 16 chr17 2597594 2597907 -86906646 - AluY SINE Alu 0 311 1 575 207 38 44 chr17 2598180 2598204 -86906349 + MIR SINE MIR 32 55 -207 1510 158 15 8 chr17 2598204 2598469 -86906084 - AluJo SINE Alu -45 267 1 575 207 38 44 chr17 2598469 2598619 -86905934 + MIR SINE MIR 55 208 -54 2282 41 48 3 chr17 2598622 2598915 -86905638 + AluY SINE Alu 1 306 -5 2132 112 0 0 chr17 2598920 2599215 -86905338 + AluSx SINE Alu 1 295 -17 2307 87 0 3 chr17 2599217 2599527 -86905026 + AluSc SINE Alu 1 309 0 2236 74 3 7 chr17 2599530 2599818 -86904735 + AluY SINE Alu 1 289 -22 299 25 25 0 chr17 2599818 2599858 -86904695 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 522 256 107 66 chr17 2599982 2600271 -86904282 - L2 LINE L2 -2 3311 3011 1216 164 100 9 chr17 2600278 2600509 -86904044 + MLT1E1 LTR MaLR 1 252 -402 2210 112 0 3 chr17 2600511 2600824 -86903729 + AluSx SINE Alu 1 312 0 1439 142 9 0 chr17 2600900 2601126 -86903427 + AluJb SINE Alu 84 311 -1 564 170 10 0 chr17 2601127 2601227 -86903326 + MLT1E LTR MaLR 493 593 0 251 211 111 11 chr17 2601227 2601317 -86903236 - L2 LINE L2 -258 3014 2916 265 281 0 0 chr17 2601330 2601394 -86903159 - MIR SINE MIR 0 262 199 * 285 350 54 39 chr17 2601392 2601526 -86903027 - L2 LINE L2 -400 2914 2775 2014 110 0 32 chr17 2601526 2601723 -86902830 + AluSx SINE Alu 1 186 -126 2371 73 0 0 chr17 2601723 2602023 -86902530 - AluY SINE Alu -11 300 1 2014 110 0 32 chr17 2602023 2602135 -86902418 + AluSx SINE Alu 186 300 -12 285 350 54 39 chr17 2602135 2602203 -86902350 - L2 LINE L2 -539 2775 2709 1190 153 14 5 chr17 2602206 2602415 -86902138 - AluJo SINE Alu -15 297 87 643 304 57 18 chr17 2602420 2602700 -86901853 - L2 LINE L2 -604 2710 2420 2113 256 88 41 chr17 2602746 2603279 -86901274 + L2 LINE L2 2153 2660 -653 2222 92 0 3 chr17 2603279 2603582 -86900971 + AluSx SINE Alu 1 302 -10 2113 256 88 41 chr17 2603582 2603994 -86900559 + L2 LINE L2 2660 3051 -262 2207 101 0 10 chr17 2603994 2604301 -86900252 - AluSg SINE Alu 0 310 7 2113 256 88 41 chr17 2604301 2604318 -86900235 + L2 LINE L2 3051 3066 -247 1006 161 105 115 chr17 2604318 2604623 -86899930 - AluJo SINE Alu 0 302 1 2113 256 88 41 chr17 2604623 2604770 -86899783 + L2 LINE L2 3066 3312 -1 260 219 70 78 chr17 2604776 2604904 -86899649 - L2 LINE L2 -907 2407 2281 1854 133 16 35 chr17 2604912 2605228 -86899325 + AluJb SINE Alu 3 312 0 201 322 0 0 chr17 2605285 2605372 -86899181 + (TG)n Simple_repeat Simple_repeat 2 88 0 2241 119 0 0 chr17 2606101 2606413 -86898140 - AluSq SINE Alu -1 312 1 2177 85 3 3 chr17 2606810 2607103 -86897450 - AluSx SINE Alu -19 293 1 2068 122 0 0 chr17 2607576 2607870 -86896683 + AluSq SINE Alu 1 294 -19 505 275 64 0 chr17 2607988 2608159 -86896394 - MIR SINE MIR -3 259 78 247 280 63 63 chr17 2608404 2608579 -86895974 + L2 LINE L2 3005 3179 -134 330 67 0 0 chr17 2608633 2608678 -86895875 + (TG)n Simple_repeat Simple_repeat 1 45 0 331 308 0 0 chr17 2609796 2609916 -86894637 + G-rich Low_complexity Low_complexity 1 120 0 323 143 0 0 chr17 2610239 2610295 -86894258 + MIR SINE MIR 71 126 -82 2055 89 13 13 chr17 2610401 2610704 -86893849 + AluSx SINE Alu 1 303 -9 421 144 10 96 chr17 2610836 2610940 -86893613 + MIR SINE MIR 128 222 -40 1919 142 0 0 chr17 2611359 2611669 -86892884 + AluSg SINE Alu 1 310 0 481 284 49 22 chr17 2612035 2612218 -86892335 + MIR SINE MIR 35 222 -40 2080 110 0 0 chr17 2612298 2612615 -86891938 - AluSx SINE Alu 0 317 1 2040 139 0 3 chr17 2612616 2612918 -86891635 - AluSx SINE Alu -11 301 1 1008 188 0 0 chr17 2612942 2613107 -86891446 - AluJo/FRAM SINE Alu -1 301 137 1756 138 14 3 chr17 2613107 2613389 -86891164 - AluJb SINE Alu -5 307 23 463 246 154 11 chr17 2613520 2613695 -86890858 - MIR SINE MIR -49 213 14 264 184 0 20 chr17 2613907 2613956 -86890597 - LTR33 LTR ERVL 0 521 474 1666 104 0 0 chr17 2613962 2614183 -86890370 + AluSq SINE Alu 1 221 -92 1112 45 0 8 chr17 2614183 2614317 -86890236 - AluSc SINE Alu -176 133 1 728 108 0 0 chr17 2614318 2614420 -86890133 - L1M3 LINE L1 -378 5793 5692 2214 52 0 25 chr17 2614426 2614735 -86889818 - AluY SINE Alu 0 308 7 206 32 32 0 chr17 2614773 2614804 -86889749 + (TA)n Simple_repeat Simple_repeat 2 33 0 951 177 6 6 chr17 2614806 2614964 -86889589 - FAM SINE Alu -17 158 1 2342 62 7 3 chr17 2615147 2615455 -86889098 - AluSg SINE Alu -1 309 1 29 78 0 0 chr17 2615714 2615778 -86888775 + GC_rich Low_complexity Low_complexity 1 64 0 23 0 0 0 chr17 2615851 2615874 -86888679 + GC_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr17 2615905 2615927 -86888626 + GC_rich Low_complexity Low_complexity 1 22 0 361 254 82 22 chr17 2616915 2617049 -86887504 - MIR SINE MIR -90 172 31 2020 126 0 10 chr17 2617248 2617549 -86887004 - AluJb SINE Alu -10 302 5 398 319 28 7 chr17 2617620 2617761 -86886792 + MLT1K LTR MaLR 174 317 -271 2378 64 0 0 chr17 2618005 2618300 -86886253 - AluY SINE Alu -16 295 1 1986 127 3 0 chr17 2618313 2618604 -86885949 - AluSg SINE Alu -18 292 1 528 232 26 46 chr17 2618844 2618995 -86885558 - MLT1K LTR MaLR -3 585 438 1414 150 7 66 chr17 2618998 2619271 -86885282 - AluJo SINE Alu -55 257 1 600 329 35 41 chr17 2619277 2619410 -86885143 - L1MC/D LINE L1 -2030 5778 5646 1694 164 23 13 chr17 2619410 2619579 -86884974 - AluJb SINE Alu -10 302 127 2342 92 0 0 chr17 2619579 2619882 -86884671 - AluSq SINE Alu -10 303 1 1694 164 23 13 chr17 2619882 2620011 -86884542 - AluJb SINE Alu -185 127 1 600 329 35 41 chr17 2620011 2620221 -86884332 - L1MC/D LINE L1 -2162 5646 5437 1874 56 0 0 chr17 2620223 2620454 -86884099 + AluY SINE Alu 81 311 0 2263 90 0 0 chr17 2620482 2620772 -86883781 - AluSx SINE Alu -22 290 1 1427 162 15 19 chr17 2620803 2621074 -86883479 - L1MC3 LINE L1 -200 7585 7316 2143 128 0 0 chr17 2621074 2621386 -86883167 - AluSq SINE Alu -1 312 1 2278 96 3 6 chr17 2621405 2621719 -86882834 - AluSp SINE Alu 0 313 1 507 196 10 0 chr17 2621758 2621855 -86882698 + MER2 DNA MER2_type 1 98 -247 1408 167 0 50 chr17 2621926 2622109 -86882444 - L1M4 LINE L1 -635 5543 5377 2479 65 3 0 chr17 2622109 2622418 -86882135 - AluY SINE Alu -1 310 1 1408 167 0 50 chr17 2622418 2622516 -86882037 - L1M4 LINE L1 -801 5377 5276 2076 111 13 25 chr17 2622518 2622833 -86881720 - AluSx SINE Alu -1 311 1 312 179 0 0 chr17 2622834 2622890 -86881663 - MLT1A2 LTR MaLR -318 56 1 1237 173 5 0 chr17 2622905 2623107 -86881446 - AluJo SINE Alu -109 203 1 2133 125 0 0 chr17 2623545 2623857 -86880696 + AluSx SINE Alu 1 312 0 308 314 8 42 chr17 2624095 2624213 -86880340 + MIR3 SINE MIR 85 198 -10 2077 100 28 0 chr17 2624281 2624572 -86879981 + AluSx SINE Alu 1 299 -13 2346 97 0 0 chr17 2624572 2624882 -86879671 + AluSg SINE Alu 1 310 0 272 338 116 0 chr17 2625270 2625468 -86879085 + L2 LINE L2 2341 2561 -753 772 148 49 0 chr17 2625471 2625593 -86878960 + FLAM_A SINE Alu 1 128 -5 2282 64 0 14 chr17 2625593 2625888 -86878665 + AluY SINE Alu 5 295 -16 1428 107 0 10 chr17 2625895 2626120 -86878433 + AluSg/x SINE Alu 78 300 0 209 279 66 0 chr17 2626120 2626181 -86878372 + L2 LINE L2 2643 2707 -607 1458 171 67 56 chr17 2626367 2626490 -86878063 + MLT1A1 LTR MaLR 1 121 -244 1682 114 103 0 chr17 2626490 2626752 -86877801 + AluSg SINE Alu 3 291 -19 1458 171 67 56 chr17 2626752 2626985 -86877568 + MLT1A1 LTR MaLR 121 361 -4 184 292 0 0 chr17 2627000 2627048 -86877505 + L2 LINE L2 3000 3047 -225 2288 98 7 0 chr17 2627213 2627519 -86877034 + AluSg SINE Alu 1 308 -2 771 311 73 87 chr17 2627576 2627869 -86876684 - L1MC4a LINE L1 -1742 6066 5783 2129 92 14 7 chr17 2627869 2628163 -86876390 - AluY SINE Alu -15 296 1 771 311 73 87 chr17 2628163 2628431 -86876122 - L1MC4a LINE L1 -2025 5783 5513 195 262 0 0 chr17 2628481 2628523 -86876030 + L2 LINE L2 3168 3209 -63 2231 102 0 0 chr17 2628541 2628844 -86875709 + AluSq SINE Alu 1 303 -10 1831 167 0 16 chr17 2629076 2629393 -86875160 + AluJo SINE Alu 1 312 0 2412 35 0 0 chr17 2629407 2629754 -86874799 + AluY SINE Alu 3 349 0 334 223 16 144 chr17 2629825 2629923 -86874630 - L3 LINE CR1 -111 1466 1402 2272 106 0 0 chr17 2629923 2630234 -86874319 + AluSx SINE Alu 2 312 0 334 223 16 144 chr17 2630234 2630323 -86874230 - L3 LINE CR1 -175 1402 1303 2104 120 0 19 chr17 2630890 2631248 -86873305 + AluSx SINE Alu 1 352 0 2241 100 13 0 chr17 2631612 2631921 -86872632 - AluSq SINE Alu 0 313 1 539 169 0 0 chr17 2632035 2632118 -86872435 - FLAM_A SINE Alu -16 126 44 1946 114 11 4 chr17 2632125 2632405 -86872148 - AluSq SINE Alu -17 296 15 1506 173 23 36 chr17 2632419 2632726 -86871827 - AluJo SINE Alu -9 303 1 640 209 162 16 chr17 2632733 2632924 -86871629 - MIR SINE MIR -13 249 31 1981 99 75 3 chr17 2632977 2633269 -86871284 - AluSq SINE Alu 0 313 1 455 395 30 31 chr17 2633271 2633808 -86870745 + L3 LINE CR1 186 805 -772 186 43 0 0 chr17 2633808 2633831 -86870722 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 455 395 30 31 chr17 2633831 2633842 -86870711 + L3 LINE CR1 805 815 -762 2222 80 7 0 chr17 2633857 2634189 -86870364 - AluSq SINE Alu 0 334 1 258 313 132 35 chr17 2634196 2634423 -86870130 + L3 LINE CR1 796 1044 -533 1947 103 41 3 chr17 2634612 2634902 -86869651 - AluSx SINE Alu -11 301 1 2067 121 0 35 chr17 2634948 2635263 -86869290 - AluSx SINE Alu -8 304 1 448 290 55 84 chr17 2635342 2635721 -86868832 - L2 LINE L2 -80 3233 2866 413 333 82 0 chr17 2635756 2635951 -86868602 + L3 LINE CR1 1343 1553 -24 2255 73 0 0 chr17 2636028 2636316 -86868237 + AluSx SINE Alu 1 288 -24 204 217 0 17 chr17 2636826 2636886 -86867667 + (CGG)n Simple_repeat Simple_repeat 3 61 0 321 26 0 0 chr17 2636955 2636993 -86867560 + (GGA)n Simple_repeat Simple_repeat 1 38 0 338 243 0 0 chr17 2638076 2638179 -86866374 + GA-rich Low_complexity Low_complexity 2 104 0 230 345 12 12 chr17 2638757 2638841 -86865712 + MIR SINE MIR 2 85 -177 310 197 33 0 chr17 2639330 2639391 -86865162 + MIR SINE MIR 74 136 -72 227 357 0 18 chr17 2639459 2639571 -86864982 + L3 LINE CR1 1443 1552 -25 2242 88 0 0 chr17 2640187 2640481 -86864072 - AluSp SINE Alu -18 295 2 403 315 0 0 chr17 2641666 2642100 -86862453 + (TG)n Simple_repeat Simple_repeat 1 434 0 659 184 15 167 chr17 2642725 2642865 -86861688 - MIR SINE MIR -1 261 183 2188 98 0 3 chr17 2642865 2643160 -86861393 + AluSx SINE Alu 1 294 -18 659 184 15 167 chr17 2643160 2643307 -86861246 - MIR SINE MIR -79 183 15 303 325 149 24 chr17 2643332 2643587 -86860966 + L2 LINE L2 3013 3299 -14 192 40 0 0 chr17 2643587 2643612 -86860941 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 303 227 30 0 chr17 2643678 2643744 -86860809 + MIR SINE MIR 5 72 -190 989 198 160 55 chr17 2643745 2644088 -86860465 - MLT1G1 LTR MaLR 0 595 217 2122 117 0 3 chr17 2644097 2644404 -86860149 - AluY SINE Alu -5 306 1 2237 101 0 0 chr17 2644406 2644702 -86859851 - AluSx SINE Alu -16 296 1 1674 198 36 51 chr17 2645515 2645930 -86858623 + LTR2 LTR ERV1 41 449 0 229 170 0 21 chr17 2645931 2645978 -86858575 + MIR SINE MIR 85 130 -78 2345 73 3 0 chr17 2646031 2646332 -86858221 - AluSq SINE Alu -11 302 1 353 301 58 0 chr17 2646343 2646446 -86858107 - MIR SINE MIR -68 140 32 2140 100 0 28 chr17 2646757 2647078 -86857475 - AluSx SINE Alu 0 312 1 2132 95 10 7 chr17 2647078 2647382 -86857171 - AluSx SINE Alu -7 305 1 1585 186 34 3 chr17 2647386 2647681 -86856872 - AluJo SINE Alu -2 310 7 2311 94 0 0 chr17 2647691 2647998 -86856555 - AluY SINE Alu -4 307 1 322 874 0 27 chr17 2648002 2648295 -86856258 - L1MC4a LINE L1 -232 5889 5542 2381 147 112 68 chr17 2648295 2648359 -86856194 - MLT2B1 LTR ERVL 0 520 460 195 42 0 0 chr17 2648359 2648383 -86856170 + (TG)n Simple_repeat Simple_repeat 2 25 0 2381 147 112 68 chr17 2648383 2648425 -86856128 - MLT2B1 LTR ERVL -60 460 421 1927 122 0 45 chr17 2648425 2648737 -86855816 - AluSx SINE Alu -10 302 5 2381 147 112 68 chr17 2648737 2649127 -86855426 - MLT2B1 LTR ERVL -99 421 1 322 874 0 27 chr17 2649127 2649145 -86855408 - L1MC4a LINE L1 -578 5543 5572 1804 123 39 7 chr17 2649194 2649478 -86855075 - AluJb SINE Alu -18 294 2 1738 114 0 70 chr17 2649645 2649943 -86854610 + AluSx SINE Alu 36 312 0 2125 101 7 23 chr17 2650242 2650550 -86854003 - AluSx SINE Alu -9 303 1 181 373 127 0 chr17 2650582 2650700 -86853853 - MIR3 SINE MIR -30 178 46 2103 118 0 0 chr17 2651057 2651353 -86853200 + AluSx SINE Alu 4 299 -13 407 276 135 0 chr17 2651687 2651843 -86852710 + MIR SINE MIR 79 255 -7 2290 106 0 0 chr17 2651980 2652291 -86852262 - AluSx SINE Alu -1 311 1 366 161 0 0 chr17 2652524 2652586 -86851967 - MIR SINE MIR -116 146 85 2361 87 0 0 chr17 2653285 2653585 -86850968 - AluSq SINE Alu -13 300 1 191 365 54 0 chr17 2653641 2653715 -86850838 + L2 LINE L2 3168 3245 -27 341 313 29 34 chr17 2653787 2653950 -86850603 - MLT1K LTR MaLR -4 584 421 2068 89 38 0 chr17 2653950 2654241 -86850312 + AluSx SINE Alu 1 302 -10 341 313 29 34 chr17 2654241 2654285 -86850268 - MLT1K LTR MaLR -167 421 378 2336 102 0 3 chr17 2654995 2655309 -86849244 - AluSq SINE Alu 0 313 1 183 288 51 17 chr17 2655456 2655515 -86849038 - L2 LINE L2 -21 3251 3191 219 318 6 35 chr17 2655891 2656061 -86848492 + (TG)n Simple_repeat Simple_repeat 1 165 0 213 238 0 0 chr17 2657010 2657090 -86847463 + (TG)n Simple_repeat Simple_repeat 1 80 0 186 150 0 0 chr17 2657173 2657213 -86847340 + (TG)n Simple_repeat Simple_repeat 1 40 0 222 234 234 0 chr17 2658398 2658492 -86846061 + L2 LINE L2 3147 3262 -10 328 358 20 35 chr17 2659023 2659224 -86845329 + MIR SINE MIR 11 208 -54 279 331 24 0 chr17 2659717 2659844 -86844709 + (ATGGTG)n Simple_repeat Simple_repeat 2 131 0 395 214 0 11 chr17 2660370 2660459 -86844094 + MIR SINE MIR 92 179 -83 2289 107 0 0 chr17 2660971 2661279 -86843274 - AluSc SINE Alu -1 308 1 2338 95 0 0 chr17 2661324 2661628 -86842925 + AluSx SINE Alu 1 304 -8 474 18 0 0 chr17 2661726 2661781 -86842772 + (TG)n Simple_repeat Simple_repeat 1 55 0 2012 108 28 3 chr17 2662559 2662845 -86841708 + AluSq SINE Alu 1 293 -20 205 277 15 15 chr17 2662873 2662938 -86841615 - L2 LINE L2 -213 3059 2995 237 278 0 42 chr17 2663020 2663092 -86841461 + MIR SINE MIR 85 153 -109 283 260 13 0 chr17 2663428 2663505 -86841048 - MLT1K LTR MaLR -2 586 509 782 254 68 36 chr17 2663595 2663728 -86840825 + L1M4 LINE L1 4597 4724 -1422 1949 142 0 0 chr17 2663728 2664045 -86840508 + AluSx SINE Alu 1 317 0 782 254 68 36 chr17 2664045 2664162 -86840391 + L1M4 LINE L1 4724 4856 -1290 506 339 86 5 chr17 2664411 2664597 -86839956 - MIR SINE MIR -15 247 47 342 196 134 31 chr17 2664971 2665068 -86839485 + MIR3 SINE MIR 95 201 -7 396 283 53 0 chr17 2665157 2665270 -86839283 + L2 LINE L2 3194 3312 -1 2043 117 17 3 chr17 2665483 2665651 -86838902 - AluSx SINE Alu -8 304 129 198 0 0 0 chr17 2665651 2665673 -86838880 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2043 117 17 3 chr17 2665673 2665804 -86838749 - AluSx SINE Alu -183 129 1 192 135 0 0 chr17 2665878 2665915 -86838638 + (TG)n Simple_repeat Simple_repeat 2 38 0 2033 104 0 14 chr17 2666508 2666828 -86837725 - AluSx SINE Alu 0 316 1 206 31 0 31 chr17 2666828 2666860 -86837693 + (TTA)n Simple_repeat Simple_repeat 2 32 0 1426 141 133 16 chr17 2666860 2667115 -86837438 - AluSx SINE Alu -27 285 1 1104 72 0 0 chr17 2667189 2667328 -86837225 - AluSq/x SINE Alu -173 139 1 1100 211 119 19 chr17 2668038 2668350 -86836203 + MER61B LTR ERV1 1 425 0 500 293 100 78 chr17 2670443 2670492 -86834061 - L3 LINE CR1 -2 1575 1529 1297 56 0 0 chr17 2670492 2670654 -86833899 - L1PA4 LINE L1 0 6155 5994 2496 72 0 0 chr17 2670654 2670960 -86833593 - AluSg SINE Alu -4 306 1 500 293 100 78 chr17 2670960 2671359 -86833194 - L3 LINE CR1 -47 1530 1116 241 212 30 81 chr17 2671419 2671518 -86833035 - MIR SINE MIR -56 152 59 2294 95 0 3 chr17 2671705 2672010 -86832543 - AluSx SINE Alu -8 304 1 1041 96 0 0 chr17 2672010 2672146 -86832407 - AluSq/x SINE Alu -177 136 1 669 207 5 88 chr17 2672774 2672839 -86831714 + MER5B DNA MER1_type 1 70 -108 2351 94 0 0 chr17 2672839 2673137 -86831416 + AluSq SINE Alu 1 298 -15 669 207 5 88 chr17 2673137 2673207 -86831346 + MER5B DNA MER1_type 70 118 -60 2076 104 0 17 chr17 2673207 2673506 -86831047 - AluSg SINE Alu -16 294 1 669 207 5 88 chr17 2673506 2673562 -86830991 + MER5B DNA MER1_type 118 177 -1 527 208 39 101 chr17 2673677 2673811 -86830742 - MER20 DNA MER1_type -25 194 76 2231 83 16 19 chr17 2673811 2674124 -86830429 + AluSx SINE Alu 1 312 0 527 208 39 101 chr17 2674124 2674196 -86830357 - MER20 DNA MER1_type -143 76 1 445 189 78 0 chr17 2674298 2674388 -86830165 + MIR SINE MIR 28 124 -138 368 278 45 65 chr17 2675162 2675351 -86829202 - MER5A DNA MER1_type -3 175 1 646 188 100 35 chr17 2675397 2675567 -86828986 + MIR SINE MIR 71 251 -11 2265 82 0 0 chr17 2675588 2675913 -86828640 - AluSx SINE Alu 0 325 1 2224 71 0 3 chr17 2676465 2676747 -86827806 - AluSx SINE Alu -8 304 24 3102 179 17 22 chr17 2676753 2677109 -86827444 - L1MB3 LINE L1 0 6183 5830 2061 130 0 19 chr17 2677109 2677425 -86827128 - AluSx SINE Alu -2 310 1 3102 179 17 22 chr17 2677425 2677655 -86826898 - L1MB3 LINE L1 -353 5830 5600 2189 108 3 0 chr17 2677656 2677952 -86826601 - AluSq SINE Alu -16 297 1 2257 99 3 0 chr17 2677963 2678267 -86826286 - AluY SINE Alu -6 305 1 2154 71 18 14 chr17 2678425 2678759 -86825794 - AluSx SINE Alu 0 335 1 797 278 17 30 chr17 2678878 2679112 -86825441 + MIR SINE MIR 32 262 0 2355 65 0 7 chr17 2679154 2679446 -86825107 - AluY SINE Alu -16 295 6 956 141 58 0 chr17 2679450 2679606 -86824947 - AluSg/x SINE Alu -6 304 140 2104 97 28 0 chr17 2679608 2679897 -86824656 - AluSx SINE Alu -13 299 3 1524 181 60 17 chr17 2679913 2680212 -86824341 - AluJb SINE Alu 0 312 1 298 313 110 49 chr17 2680219 2680465 -86824088 - L1MC/D LINE L1 -1988 5820 5560 2134 93 10 3 chr17 2680470 2680770 -86823783 + AluSq SINE Alu 1 302 -11 1685 96 57 57 chr17 2680865 2681166 -86823387 - AluSg SINE Alu 0 301 1 380 181 150 16 chr17 2681376 2681503 -86823050 - L1ME4a LINE L1 -3 6118 5975 2003 133 7 0 chr17 2681505 2681805 -86822748 - AluJb SINE Alu -10 302 1 872 150 33 56 chr17 2681808 2681988 -86822565 - MER3 DNA MER1_type -80 129 1 1483 181 18 18 chr17 2682471 2682752 -86821801 + AluJo SINE Alu 1 281 -31 237 33 0 0 chr17 2682752 2682782 -86821771 + (T)n Simple_repeat Simple_repeat 1 30 0 946 90 37 148 chr17 2682789 2682839 -86821714 + AluSx SINE Alu 11 65 -247 1298 25 12 6 chr17 2682839 2683002 -86821551 - L1PA4 LINE L1 0 6155 5992 946 90 37 148 chr17 2683002 2683140 -86821413 + AluSx SINE Alu 65 178 -134 2519 58 7 0 chr17 2683973 2684282 -86820271 + AluY SINE Alu 1 311 0 2245 102 3 0 chr17 2684297 2684592 -86819961 + AluSx SINE Alu 1 296 -16 2478 69 10 0 chr17 2684594 2684899 -86819654 + AluSp SINE Alu 3 310 -3 1561 180 50 11 chr17 2685082 2685365 -86819188 - AluJo SINE Alu -18 294 1 217 254 14 56 chr17 2685590 2685661 -86818892 - L2 LINE L2 -1 3312 3245 * 821 254 19 5 chr17 2685649 2685854 -86818699 + MIR SINE MIR 35 242 -20 2145 95 0 46 chr17 2686101 2686426 -86818127 - AluY SINE Alu -1 310 1 2268 110 0 0 chr17 2686857 2687165 -86817388 + AluSc SINE Alu 1 308 -1 368 330 64 34 chr17 2687421 2687657 -86816896 - L2 LINE L2 -50 3263 3021 1329 78 0 0 chr17 2687657 2687824 -86816729 + AluSx SINE Alu 1 167 -145 2342 84 7 0 chr17 2688190 2688498 -86816055 + AluSx SINE Alu 1 310 -2 296 197 68 68 chr17 2688561 2688678 -86815875 - L2 LINE L2 -277 3036 2920 2262 80 10 3 chr17 2689116 2689415 -86815138 - AluSx SINE Alu -11 301 1 783 197 0 0 chr17 2689950 2690082 -86814471 - FLAM_C SINE Alu 0 133 2 502 151 0 0 chr17 2690137 2690223 -86814330 - L1MB1 LINE L1 -1 6167 6082 2001 92 0 18 chr17 2690282 2690564 -86813989 + AluSx SINE Alu 22 298 -14 2308 61 0 10 chr17 2690565 2690882 -86813671 + AluSc SINE Alu 1 309 0 779 125 7 0 chr17 2691060 2691196 -86813357 + (TCCCC)n Simple_repeat Simple_repeat 1 137 0 2180 112 7 0 chr17 2691271 2691575 -86812978 - AluSx SINE Alu -6 306 1 248 217 130 99 chr17 2691575 2691736 -86812817 - L1MC4a LINE L1 -1863 5945 5780 1651 169 13 26 chr17 2691807 2692120 -86812433 + AluJo SINE Alu 1 309 -3 2266 105 0 0 chr17 2692122 2692427 -86812126 + AluSg SINE Alu 1 305 -5 2500 59 0 0 chr17 2692475 2692782 -86811771 + AluY SINE Alu 1 307 -4 1917 122 13 10 chr17 2692893 2693197 -86811356 + AluSx SINE Alu 1 305 -7 390 277 28 74 chr17 2693226 2693344 -86811209 - L1ME3 LINE L1 -316 5850 5728 2218 79 21 0 chr17 2693344 2693635 -86810918 - AluSx SINE Alu -15 297 1 390 277 28 74 chr17 2693635 2693670 -86810883 - L1ME3 LINE L1 -438 5728 5693 2001 53 0 0 chr17 2693670 2693915 -86810638 + AluY SINE Alu 64 308 -3 390 277 28 74 chr17 2693915 2694054 -86810499 - L1ME3 LINE L1 -473 5693 5565 1870 161 0 0 chr17 2694721 2695007 -86809546 + AluJb SINE Alu 9 294 -18 183 42 0 0 chr17 2695090 2695114 -86809439 + (TTAAA)n Simple_repeat Simple_repeat 1 24 0 2154 103 0 10 chr17 2695118 2695420 -86809133 - AluY SINE Alu -12 299 1 2183 78 0 3 chr17 2695429 2695711 -86808842 - AluSx SINE Alu -23 289 9 860 163 36 24 chr17 2695769 2695935 -86808618 + AluJo SINE Alu 123 290 -22 882 270 34 142 chr17 2696431 2696548 -86808005 - MLT1K LTR MaLR -21 567 439 1912 138 0 0 chr17 2696548 2696866 -86807687 + AluSx SINE Alu 1 318 0 882 270 34 142 chr17 2696866 2697176 -86807377 - MLT1K LTR MaLR -149 439 224 1850 160 0 0 chr17 2697176 2697469 -86807084 + AluJb SINE Alu 10 302 -10 882 270 34 142 chr17 2697469 2697658 -86806895 - MLT1K LTR MaLR -364 224 16 2254 93 0 0 chr17 2697803 2698104 -86806449 - AluY SINE Alu -10 301 1 311 307 11 0 chr17 2698105 2698193 -86806360 + MIR SINE MIR 62 150 -112 2307 97 0 3 chr17 2698205 2698516 -86806037 - AluSg SINE Alu 0 310 1 1091 188 21 52 chr17 2698895 2699183 -86805370 - MER113 DNA MER1_type? -43 478 200 2182 110 0 22 chr17 2699219 2699538 -86805015 + AluSx SINE Alu 1 312 0 1733 185 70 108 chr17 2699539 2699992 -86804561 - L1MC3 LINE L1 -35 7750 7281 1878 66 8 0 chr17 2699992 2700234 -86804319 - AluSp SINE Alu -7 306 63 1733 185 70 108 chr17 2700234 2700342 -86804211 - L1MC3 LINE L1 -504 7281 7211 2022 110 3 31 chr17 2700342 2700661 -86803892 - AluSx SINE Alu -2 310 1 1733 185 70 108 chr17 2700661 2700698 -86803855 - L1MC3 LINE L1 -574 7211 7174 661 154 89 8 chr17 2700723 2700846 -86803707 - FLAM_A SINE Alu 0 133 1 2087 115 0 0 chr17 2700914 2701209 -86803344 + AluJb SINE Alu 1 295 -17 1140 123 0 0 chr17 2701211 2701381 -86803172 + AluSq SINE Alu 141 310 -3 22 0 0 0 chr17 2701390 2701412 -86803141 + AT_rich Low_complexity Low_complexity 1 22 0 2373 60 0 10 chr17 2701502 2701804 -86802749 - AluY SINE Alu -12 299 1 2210 66 0 0 chr17 2702479 2702751 -86801802 + AluSx SINE Alu 34 305 -7 216 208 75 0 chr17 2703098 2703151 -86801402 + CT-rich Low_complexity Low_complexity 1 57 0 269 294 59 112 chr17 2703156 2703442 -86801111 - L2 LINE L2 -18 3295 3025 2219 93 7 3 chr17 2703483 2703785 -86800768 - AluSx SINE Alu -9 303 1 2354 80 0 0 chr17 2704207 2704518 -86800035 - AluY SINE Alu 0 311 1 2149 103 0 0 chr17 2705332 2705624 -86798929 - AluSx SINE Alu -3 309 18 710 227 178 58 chr17 2705625 2705779 -86798774 - L1ME2 LINE L1 -34 6130 5996 2048 111 0 0 chr17 2705779 2706092 -86798461 + AluSg SINE Alu 1 313 0 2017 126 0 3 chr17 2706100 2706401 -86798152 + AluSg SINE Alu 1 300 -10 710 227 178 58 chr17 2706401 2706601 -86797952 - L1ME2 LINE L1 -174 5990 5722 1164 129 0 6 chr17 2706603 2706796 -86797757 - AluSg/x SINE Alu 0 306 115 643 308 25 5 chr17 2706834 2707032 -86797521 - MIR SINE MIR -60 202 1 2344 70 0 0 chr17 2707202 2707504 -86797049 - AluSg SINE Alu -7 303 2 2105 108 3 13 chr17 2708697 2709012 -86795541 - AluSx SINE Alu 0 312 1 769 242 128 33 chr17 2710093 2710198 -86794355 - MER113 DNA MER1_type? -95 426 332 2512 50 0 0 chr17 2710198 2710498 -86794055 - AluY SINE Alu -11 300 1 769 242 128 33 chr17 2710498 2710665 -86793888 - MER113 DNA MER1_type? -189 332 182 2292 79 0 7 chr17 2710665 2710969 -86793584 + AluY SINE Alu 1 302 -9 2111 105 13 0 chr17 2710978 2711284 -86793269 + AluSq SINE Alu 1 310 -3 769 242 128 33 chr17 2711284 2711389 -86793164 - MER113 DNA MER1_type? -346 175 1 778 85 0 77 chr17 2711939 2712069 -86792484 - FLAM_C SINE Alu -13 130 11 210 37 0 0 chr17 2712526 2712553 -86792000 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 205 186 0 0 chr17 2712788 2712831 -86791722 + A-rich Low_complexity Low_complexity 2 44 0 237 239 18 46 chr17 2713655 2713764 -86790789 + G-rich Low_complexity Low_complexity 3 108 0 49 76 0 0 chr17 2713831 2713936 -86790617 + GC_rich Low_complexity Low_complexity 1 105 0 22 70 0 0 chr17 2713952 2713995 -86790558 + GC_rich Low_complexity Low_complexity 1 43 0 262 140 21 97 chr17 2714050 2714175 -86790378 + G-rich Low_complexity Low_complexity 1 115 0 1567 216 37 41 chr17 2715434 2715803 -86788750 - MER113 DNA MER1_type? -44 477 108 1863 115 3 11 chr17 2715803 2716112 -86788441 - AluSx SINE Alu 0 307 1 1567 216 37 41 chr17 2716112 2716204 -86788349 - MER113 DNA MER1_type? -413 108 17 2115 110 0 0 chr17 2718016 2718306 -86786247 + AluSx SINE Alu 1 290 -22 1389 187 74 107 chr17 2718620 2718824 -86785729 - L1MC5 LINE L1 -48 7913 7704 1542 144 7 22 chr17 2718824 2719094 -86785459 + AluJb SINE Alu 1 266 -46 1389 187 74 107 chr17 2719094 2719305 -86785248 - L1MC5 LINE L1 -257 7704 7488 2152 114 0 10 chr17 2719305 2719612 -86784941 - AluSx SINE Alu -8 304 1 1389 187 74 107 chr17 2719612 2719644 -86784909 - L1MC5 LINE L1 -473 7488 7456 1782 172 0 0 chr17 2719644 2719934 -86784619 - AluJb SINE Alu -22 290 1 1389 187 74 107 chr17 2719934 2720121 -86784432 - L1MC5 LINE L1 -505 7456 7298 859 304 98 43 chr17 2720633 2720791 -86783762 + L2 LINE L2 2606 2754 -559 2189 115 0 6 chr17 2720791 2721104 -86783449 - AluSx SINE Alu -1 311 1 859 304 98 43 chr17 2721104 2721611 -86782942 + L2 LINE L2 2754 3313 0 1096 113 57 0 chr17 2721674 2721833 -86782720 - AluSq SINE Alu -12 301 134 1993 78 0 75 chr17 2721833 2722154 -86782399 - AluY SINE Alu -14 297 1 281 167 0 77 chr17 2722820 2722898 -86781655 - MER113 DNA MER1_type? -308 213 142 2302 103 3 0 chr17 2722914 2723225 -86781328 + AluSx SINE Alu 1 312 0 2240 65 17 14 chr17 2723973 2724267 -86780286 + AluSq SINE Alu 1 295 -18 280 305 9 19 chr17 2724419 2724524 -86780029 - L2 LINE L2 -14 3299 3196 345 314 115 20 chr17 2724528 2724780 -86779773 + MER102a DNA MER1_type 34 309 -21 391 274 184 17 chr17 2725149 2725328 -86779225 - MIR SINE MIR -34 228 20 2091 101 3 0 chr17 2726781 2727098 -86777455 - AluSx SINE Alu 0 318 1 2012 134 0 3 chr17 2727100 2727398 -86777155 - AluSg SINE Alu -13 297 1 1612 283 67 16 chr17 2727420 2727975 -86776578 - MLT1K LTR MaLR -4 584 2 2250 96 0 3 chr17 2728715 2729017 -86775536 - AluSx SINE Alu -11 301 1 1846 190 25 11 chr17 2729043 2729401 -86775152 - MLT1A1 LTR MaLR 0 365 3 1043 186 80 0 chr17 2729414 2729640 -86774913 + L1MB4 LINE L1 5903 6146 -34 2085 104 7 10 chr17 2730316 2730615 -86773938 - AluSg SINE Alu -12 298 1 301 189 67 168 chr17 2730649 2730887 -86773666 - L1ME4a LINE L1 -11 6110 5897 649 288 91 81 chr17 2730889 2731142 -86773411 - MLT1K LTR MaLR -3 585 336 2211 119 0 0 chr17 2731142 2731454 -86773099 - AluSq SINE Alu -1 312 1 649 288 91 81 chr17 2731454 2731770 -86772783 - MLT1K LTR MaLR -252 336 10 715 278 66 32 chr17 2731819 2732140 -86772413 + L1MC4a LINE L1 5493 5826 -320 2080 116 34 0 chr17 2732140 2732433 -86772120 + AluSx SINE Alu 1 303 -9 682 295 114 41 chr17 2732457 2732870 -86771683 - MER65A LTR ERV1 -2 443 1 1185 164 121 4 chr17 2732893 2733125 -86771428 - AluJo SINE Alu -16 296 38 1261 138 0 0 chr17 2733132 2733321 -86771232 + AluSg/x SINE Alu 114 302 -10 1987 135 0 46 chr17 2733376 2733703 -86770850 + AluJb SINE Alu 1 312 0 547 117 43 0 chr17 2733860 2733954 -86770599 + L1MB5 LINE L1 6031 6128 -46 2074 81 3 47 chr17 2733954 2734274 -86770279 - AluSq SINE Alu 0 307 1 368 271 102 0 chr17 2734275 2734393 -86770160 + MIR SINE MIR 63 192 -70 954 216 121 67 chr17 2735150 2735260 -86769293 - LTR56 LTR ERV1 -1 444 341 2148 115 0 3 chr17 2735260 2735565 -86768988 - AluSx SINE Alu -8 304 1 954 216 121 67 chr17 2735565 2735875 -86768678 - LTR56 LTR ERV1 -104 341 1 250 343 0 19 chr17 2736003 2736108 -86768445 + L2 LINE L2 2304 2406 -908 2195 75 0 0 chr17 2736121 2736435 -86768118 - AluY SINE Alu 0 314 1 2795 149 16 69 chr17 2736476 2737081 -86767472 - MER4B LTR ERV1 -36 574 2 2363 75 7 0 chr17 2737082 2737387 -86767166 - AluSp SINE Alu -6 307 1 747 335 23 0 chr17 2737398 2737658 -86766895 + L2 LINE L2 2480 2745 -569 1958 107 0 11 chr17 2737664 2737935 -86766618 + AluSx SINE Alu 1 268 -44 309 371 54 5 chr17 2737978 2738164 -86766389 - L2 LINE L2 -530 2784 2590 271 280 229 0 chr17 2738425 2738582 -86765971 - L2 LINE L2 -896 2418 2226 436 363 14 5 chr17 2738990 2739213 -86765340 + MIR SINE MIR 34 258 -4 2215 123 0 0 chr17 2739312 2739613 -86764940 - AluSq SINE Alu -12 301 1 2483 100 0 0 chr17 2739750 2740060 -86764493 - AluSx SINE Alu -2 310 1 2349 98 0 3 chr17 2740062 2740359 -86764194 - AluSq SINE Alu -17 296 1 303 274 29 0 chr17 2740610 2740712 -86763841 - MIR SINE MIR -67 141 37 585 56 0 0 chr17 2740831 2740924 -86763629 + AluSp/q SINE Alu 212 304 0 366 232 191 10 chr17 2740952 2741146 -86763407 + L1 LINE L1 3722 3950 -2196 2498 94 0 0 chr17 2741423 2741732 -86762821 - AluSg SINE Alu -1 309 1 2389 79 6 29 chr17 2741983 2742299 -86762254 - AluY SINE Alu -2 309 1 2031 150 70 20 chr17 2742299 2742698 -86761855 + L1MD1 LINE L1 5582 6000 -359 778 171 7 7 chr17 2742701 2742853 -86761700 + L1MD1 LINE L1 6084 6235 -7 1258 108 12 0 chr17 2742855 2743022 -86761531 - AluSq SINE Alu -15 298 130 2223 99 0 48 chr17 2743412 2743726 -86760827 - AluSq SINE Alu -14 299 1 265 208 24 112 chr17 2743765 2743890 -86760663 - L2 LINE L2 -936 2378 2265 599 286 77 21 chr17 2744137 2744371 -86760182 + Charlie8 DNA MER1_type 26 272 -2145 587 167 19 0 chr17 2744399 2744507 -86760046 - L1MB5 LINE L1 -6 6168 6059 1732 122 0 8 chr17 2744508 2744754 -86759799 - AluSx SINE Alu -10 302 59 1020 93 10 62 chr17 2744855 2744991 -86759562 - L1MC/D LINE L1 -892 5467 5342 2204 117 0 0 chr17 2744991 2745281 -86759272 - AluSx SINE Alu -22 290 1 1020 93 10 62 chr17 2745281 2745337 -86759216 - L1MC/D LINE L1 -1017 5342 5285 2688 161 28 47 chr17 2745345 2745947 -86758606 - L1MB7 LINE L1 0 6184 5594 267 182 36 0 chr17 2745947 2746002 -86758551 - L1M4 LINE L1 -534 5650 5594 265 295 0 0 chr17 2745998 2746059 -86758494 - L1M4 LINE L1 -530 5654 5594 * 330 206 7 0 chr17 2746042 2746115 -86758438 - L1M3 LINE L1 -510 5670 5595 339 223 30 5 chr17 2746118 2746240 -86758313 - L1M1 LINE L1 -510 5670 5582 * 926 218 14 45 chr17 2746215 2746435 -86758118 - L1M4 LINE L1 -506 5668 5456 863 71 0 0 chr17 2746535 2746633 -86757920 - AluSq/x SINE Alu -186 126 29 180 97 0 0 chr17 2747266 2747297 -86757256 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1681 159 3 14 chr17 2747299 2747582 -86756971 - AluSx SINE Alu -30 282 3 427 94 0 0 chr17 2747699 2747763 -86756790 + Alu SINE Alu 236 299 -12 183 385 13 0 chr17 2747977 2748055 -86756498 - L2 LINE L2 -55 3258 3180 917 219 40 4 chr17 2748480 2748731 -86755822 - L1MB3 LINE L1 0 6183 5924 576 200 77 0 chr17 2748734 2748864 -86755689 - MER46A DNA MER2_type 0 236 97 1153 74 0 0 chr17 2748864 2748999 -86755554 + AluSq/x SINE Alu 1 135 -178 2277 116 3 0 chr17 2748999 2749301 -86755252 + AluSx SINE Alu 1 303 -9 592 162 0 0 chr17 2749301 2749400 -86755153 - MER46A DNA MER2_type -132 104 6 2026 98 0 4 chr17 2749526 2749781 -86754772 - AluSx SINE Alu -58 254 1 807 154 7 0 chr17 2749781 2749917 -86754636 + MLT1D LTR MaLR 367 503 -2 2158 97 49 3 chr17 2750359 2750647 -86753906 - AluSx SINE Alu -11 301 1 1447 97 181 30 chr17 2750912 2751211 -86753342 + THE1C LTR MaLR 7 350 -25 665 206 23 0 chr17 2751412 2751543 -86753010 + MER44D DNA MER2_type 600 605 0 275 278 17 17 chr17 2751543 2751658 -86752895 - L1M4 LINE L1 -2399 3747 3633 2564 81 0 7 chr17 2751677 2751987 -86752566 - AluSx SINE Alu -4 308 1 450 308 67 33 chr17 2752352 2752651 -86751902 + L1MC/D LINE L1 5493 5801 -320 373 210 0 27 chr17 2752652 2752759 -86751794 + AluS SINE Alu 2 84 -219 767 217 54 12 chr17 2753432 2753598 -86750955 - MER63A DNA MER1_type -37 173 1 23 0 0 0 chr17 2754498 2754521 -86750032 + AT_rich Low_complexity Low_complexity 1 23 0 1084 222 0 9 chr17 2754930 2755155 -86749398 - MER58A DNA MER1_type 0 224 2 228 185 11 179 chr17 2755164 2755312 -86749241 + MER113 DNA MER1_type? 1 114 -407 2349 91 13 3 chr17 2755312 2755621 -86748932 - AluSp SINE Alu 0 313 2 228 185 11 179 chr17 2755621 2755656 -86748897 + MER113 DNA MER1_type? 114 153 -368 1874 125 96 0 chr17 2757197 2757477 -86747076 - AluSx SINE Alu -5 307 1 201 74 0 0 chr17 2758165 2758192 -86746361 + (GGGTG)n Simple_repeat Simple_repeat 3 29 0 1147 307 60 73 chr17 2758486 2758693 -86745860 - L1M4 LINE L1 -2292 3854 3646 1474 88 206 88 chr17 2758693 2758965 -86745588 - AluSq SINE Alu -9 304 1 1147 307 60 73 chr17 2758965 2759520 -86745033 - L1M4 LINE L1 -2500 3646 3102 283 224 75 0 chr17 2759603 2759670 -86744883 - MIR SINE MIR -85 177 106 740 186 8 0 chr17 2759728 2759857 -86744696 - FLAM_C SINE Alu 0 133 4 337 308 28 41 chr17 2759864 2760182 -86744371 - L1M4 LINE L1 -3104 3042 2729 2023 142 17 0 chr17 2760266 2760555 -86743998 - AluJb SINE Alu -18 294 1 1058 284 83 11 chr17 2760561 2761004 -86743549 + L1MC/D LINE L1 5287 5761 -2047 1719 103 0 0 chr17 2761010 2761233 -86743320 - AluSg/x SINE Alu -1 309 87 922 215 77 11 chr17 2761357 2761650 -86742903 - L1ME LINE L1 -567 5580 5244 2560 72 0 0 chr17 2761659 2761965 -86742588 - AluY SINE Alu -5 306 1 2424 91 0 0 chr17 2761967 2762265 -86742288 - AluSg SINE Alu -12 298 1 636 167 15 38 chr17 2762265 2762397 -86742156 - AluJo/FLAM SINE Alu -173 129 1 2150 129 0 13 chr17 2762399 2762710 -86741843 - AluJb SINE Alu -5 307 1 1058 221 50 31 chr17 2762712 2762870 -86741683 - L1ME LINE L1 -947 5182 5029 2298 102 0 13 chr17 2762870 2763175 -86741378 - AluSc SINE Alu -8 301 1 1058 221 50 31 chr17 2763175 2763373 -86741180 - L1ME LINE L1 -1100 5029 4819 627 311 5 0 chr17 2763421 2763617 -86740936 - MER117 DNA MER1_type 0 197 1 325 212 71 62 chr17 2763620 2763733 -86740820 - MIR SINE MIR -135 127 14 181 331 33 41 chr17 2763701 2763822 -86740731 + MIR SINE MIR 34 153 -55 * 196 196 0 54 chr17 2764420 2764532 -86740021 + C-rich Low_complexity Low_complexity 3 108 0 837 228 92 13 chr17 2766258 2766486 -86738067 + MIR SINE MIR 16 261 -1 477 130 0 0 chr17 2766534 2766603 -86737950 + AluS SINE Alu 2 70 -242 1894 75 0 17 chr17 2766710 2766951 -86737602 - AluSq SINE Alu -76 237 1 969 285 73 39 chr17 2766951 2767750 -86736803 - L1ME LINE L1 -2867 3262 2437 426 275 72 4 chr17 2768297 2768533 -86736020 - L1ME LINE L1 -3759 2370 2119 2184 123 7 13 chr17 2768547 2768857 -86735696 - AluSx SINE Alu -4 308 1 202 222 25 49 chr17 2768886 2768967 -86735586 + T-rich Low_complexity Low_complexity 2 80 0 252 339 87 32 chr17 2769290 2769431 -86735122 - HAL1b LINE L1 -702 646 487 2445 77 0 26 chr17 2769431 2769744 -86734809 - AluY SINE Alu -6 305 1 252 339 87 32 chr17 2769744 2769820 -86734733 - HAL1b LINE L1 -861 487 417 23 54 0 0 chr17 2769877 2769914 -86734639 + AT_rich Low_complexity Low_complexity 1 37 0 519 299 54 9 chr17 2769975 2770199 -86734354 - L1ME LINE L1 -4898 1221 988 219 335 112 29 chr17 2770235 2770262 -86734291 + L2 LINE L2 2661 2684 -630 2250 124 0 0 chr17 2770262 2770569 -86733984 - AluSq SINE Alu -5 308 2 219 335 112 29 chr17 2770569 2770711 -86733842 + L2 LINE L2 2684 2844 -470 285 167 0 0 chr17 2770931 2770979 -86733574 - Alu SINE Alu -247 52 5 2323 63 14 3 chr17 2772891 2773177 -86731376 - AluSx SINE Alu -23 289 1 189 74 0 0 chr17 2774642 2774669 -86729884 + (ATG)n Simple_repeat Simple_repeat 2 28 0 237 297 51 93 chr17 2774721 2774809 -86729744 - MIR SINE MIR -65 143 60 2393 87 3 13 chr17 2774809 2775118 -86729435 + AluSg SINE Alu 1 306 -4 237 297 51 93 chr17 2775118 2775147 -86729406 - MIR SINE MIR -148 60 31 280 355 11 0 chr17 2775263 2775356 -86729197 - MIR SINE MIR -60 148 55 231 193 35 0 chr17 2775629 2775686 -86728867 + T-rich Low_complexity Low_complexity 2 60 0 228 154 0 0 chr17 2775811 2775863 -86728690 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 467 266 140 70 chr17 2775920 2776443 -86728110 - L1MEc LINE L1 -3574 2641 2119 2317 85 0 10 chr17 2777645 2777940 -86726613 - AluY SINE Alu -19 292 1 252 333 43 11 chr17 2778735 2778828 -86725725 + L2 LINE L2 3168 3263 -9 604 291 28 14 chr17 2779658 2779871 -86724682 - MIR SINE MIR -33 229 14 214 200 186 0 chr17 2780041 2780111 -86724442 + MER5A DNA MER1_type 85 167 -22 201 167 19 56 chr17 2780626 2780680 -86723873 + C-rich Low_complexity Low_complexity 2 53 0 2375 100 7 0 chr17 2781256 2781565 -86722988 - AluSx SINE Alu -1 311 1 316 311 8 42 chr17 2781569 2781688 -86722865 - MIR SINE MIR -101 161 47 414 263 68 8 chr17 2781735 2781853 -86722700 + MIR3 SINE MIR 30 154 -54 325 266 79 79 chr17 2782693 2782870 -86721683 + MIR SINE MIR 15 191 -71 2634 62 0 0 chr17 2784255 2784562 -86719991 - AluY SINE Alu -4 307 1 451 326 59 0 chr17 2785354 2785575 -86718978 + L1MC/D LINE L1 5567 5800 -2008 * 756 261 22 14 chr17 2785563 2785839 -86718714 + L1MB5 LINE L1 3334 3611 -2535 * 2579 205 31 7 chr17 2785818 2786512 -86718041 + L1MB5 LINE L1 5182 5890 -284 2252 96 0 0 chr17 2786517 2786842 -86717711 + AluSg SINE Alu 1 325 0 378 211 0 10 chr17 2786902 2787005 -86717548 + L1M4 LINE L1 5597 5694 -470 2151 38 0 0 chr17 2787005 2787244 -86717309 + AluY SINE Alu 1 239 -72 2262 109 3 0 chr17 2788977 2789279 -86715274 + AluSx SINE Alu 2 304 -8 2287 121 3 0 chr17 2789354 2789661 -86714892 - AluSq SINE Alu -5 308 1 345 334 76 12 chr17 2790033 2790278 -86714275 + MIR SINE MIR 3 261 -1 313 314 211 42 chr17 2791168 2791429 -86713124 + L2 LINE L2 2966 3270 -2 180 404 19 0 chr17 2791605 2791709 -86712844 - MIR SINE MIR -110 152 47 336 248 0 76 chr17 2791734 2791839 -86712714 - MIR SINE MIR -106 156 60 1422 19 0 0 chr17 2792098 2792260 -86712293 + L1PA4 LINE L1 5994 6155 0 272 310 78 16 chr17 2792521 2792669 -86711884 + MIR SINE MIR 21 192 -70 1108 153 45 0 chr17 2792773 2792992 -86711561 + AluSg/x SINE Alu 98 324 0 1420 118 34 58 chr17 2792992 2793153 -86711400 + L1M3 LINE L1 5319 5471 -697 2182 76 6 29 chr17 2793153 2793469 -86711084 + AluSc SINE Alu 1 309 0 1420 118 34 58 chr17 2793469 2793603 -86710950 + L1M3 LINE L1 5471 5607 -561 4097 219 55 63 chr17 2793620 2794149 -86710404 - L1M4 LINE L1 -1191 4955 4423 2211 74 29 29 chr17 2794149 2794460 -86710093 - AluY SINE Alu 0 311 1 4097 219 55 63 chr17 2794460 2795064 -86709489 - L1M4 LINE L1 -1723 4423 3834 2154 109 3 3 chr17 2795064 2795376 -86709177 - AluSx SINE Alu 0 312 1 4097 219 55 63 chr17 2795376 2795735 -86708818 - L1M4 LINE L1 -2312 3834 3474 229 209 149 88 chr17 2795971 2796045 -86708508 - MER5A DNA MER1_type -32 157 89 2233 92 3 0 chr17 2796045 2796340 -86708213 - AluSq SINE Alu -17 296 1 229 209 149 88 chr17 2796340 2796413 -86708140 - MER5A DNA MER1_type -100 89 1 452 246 25 49 chr17 2796811 2796933 -86707620 - L2 LINE L2 -2 3311 3193 191 277 161 36 chr17 2797369 2797506 -86707047 - MIR SINE MIR -13 249 96 200 244 0 0 chr17 2798672 2798713 -86705840 - L2 LINE L2 -3 3269 3229 2200 126 7 0 chr17 2799327 2799637 -86704916 - AluSx SINE Alu 0 312 1 338 291 48 79 chr17 2799786 2799891 -86704662 - MIR SINE MIR -13 249 151 2372 95 0 0 chr17 2799891 2800196 -86704357 - AluSx SINE Alu -7 305 1 338 291 48 79 chr17 2800196 2800279 -86704274 - MIR SINE MIR -111 151 67 186 381 27 34 chr17 2800514 2800661 -86703892 + L2 LINE L2 2909 3054 -218 313 190 0 0 chr17 2800665 2800723 -86703830 + MLT1F1 LTR MaLR 6 63 -504 2116 128 3 0 chr17 2800728 2801026 -86703527 + AluJb SINE Alu 7 305 -7 2196 106 0 19 chr17 2801037 2801370 -86703183 + AluSx SINE Alu 1 312 0 367 342 21 13 chr17 2801594 2801818 -86702735 - L1MC/D LINE L1 -382 5739 5579 357 318 139 40 chr17 2802102 2802157 -86702396 - MIR SINE MIR -11 251 203 2013 141 3 0 chr17 2802157 2802462 -86702091 - AluSq SINE Alu -7 306 1 357 318 139 40 chr17 2802462 2802629 -86701924 - MIR SINE MIR -59 203 7 707 217 28 28 chr17 2802877 2803057 -86701496 - MER104 DNA MER2_type 0 180 1 2222 103 0 0 chr17 2803256 2803548 -86701005 + AluSx SINE Alu 1 292 -20 248 229 29 0 chr17 2803983 2804053 -86700500 - L2 LINE L2 -284 2988 2917 1770 75 4 8 chr17 2804842 2805082 -86699471 - AluSg/x SINE Alu -1 311 73 543 44 0 0 chr17 2805083 2805151 -86699402 - AluY SINE Alu -10 299 232 21 0 0 0 chr17 2805151 2805172 -86699381 + AT_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr17 2806374 2806407 -86698146 + (CA)n Simple_repeat Simple_repeat 2 34 0 2252 97 13 7 chr17 2806537 2806846 -86697707 - AluSx SINE Alu -1 311 1 262 130 0 43 chr17 2806847 2806916 -86697637 + (TTTTG)n Simple_repeat Simple_repeat 5 70 0 239 326 61 0 chr17 2808253 2808351 -86696202 - MER91A DNA MER1_type -48 148 45 1881 143 14 10 chr17 2808440 2808734 -86695819 - AluJo SINE Alu -15 297 3 272 326 22 0 chr17 2809376 2809468 -86695085 + L3b LINE CR1 1283 1376 -207 814 246 44 68 chr17 2809981 2810235 -86694318 + MLT1D LTR MaLR 1 245 -260 2511 34 0 0 chr17 2810235 2810528 -86694025 + AluY SINE Alu 1 293 -18 814 246 44 68 chr17 2810528 2810639 -86693914 + MLT1D LTR MaLR 245 357 -148 212 356 0 42 chr17 2811202 2811320 -86693233 + C-rich Low_complexity Low_complexity 2 114 0 754 257 104 47 chr17 2811679 2812123 -86692430 + HAL1b LINE L1 874 1342 -6 723 119 12 226 chr17 2812187 2812207 -86692346 + AluSg/x SINE Alu 118 141 -168 2134 95 10 17 chr17 2812207 2812503 -86692050 + AluSx SINE Alu 1 294 -18 2333 84 3 0 chr17 2812503 2812799 -86691754 + AluSg SINE Alu 1 297 -13 723 119 12 226 chr17 2812799 2813020 -86691533 + AluSg/x SINE Alu 139 308 -1 1194 238 3 40 chr17 2813498 2813821 -86690732 + MLT1A1 LTR MaLR 55 365 0 389 249 136 45 chr17 2813822 2814087 -86690466 + MLT1C LTR MaLR 94 382 -123 415 200 3 114 chr17 2814258 2814339 -86690214 + MLT1C LTR MaLR 349 388 -79 2155 113 0 10 chr17 2814339 2814650 -86689903 + AluSx SINE Alu 1 308 -4 415 200 3 114 chr17 2814650 2814720 -86689833 + MLT1C LTR MaLR 388 464 -3 382 333 85 7 chr17 2815156 2815297 -86689256 - MIR SINE MIR -35 227 76 1175 128 35 62 chr17 2815612 2815838 -86688715 + AluJo SINE Alu 86 305 -7 2379 81 7 0 chr17 2815841 2816150 -86688403 + AluSx SINE Alu 1 311 -1 583 265 24 30 chr17 2816908 2817024 -86687529 - MIR SINE MIR 0 262 146 2712 139 12 21 chr17 2817024 2817384 -86687169 + MSTA LTR MaLR 1 358 -70 2294 105 3 0 chr17 2817384 2817688 -86686865 - AluSg SINE Alu -5 305 1 2712 139 12 21 chr17 2817688 2817759 -86686794 + MSTA LTR MaLR 358 428 0 583 265 24 30 chr17 2817759 2817808 -86686745 - MIR SINE MIR -116 146 98 2102 130 0 0 chr17 2817826 2818118 -86686435 + AluSx SINE Alu 1 292 -20 1026 90 0 0 chr17 2818137 2818270 -86686283 + AluSq/x SINE Alu 1 133 -180 2119 81 4 0 chr17 2818272 2818545 -86686008 + AluSp SINE Alu 1 274 -39 922 191 7 0 chr17 2818646 2818905 -86685648 + L1MA4 LINE L1 5172 5432 -743 * 1106 171 19 0 chr17 2818898 2819108 -86685445 - L1M4 LINE L1 -493 5691 5478 5152 131 30 15 chr17 2819146 2819625 -86684928 + L1MA4 LINE L1 5430 5928 -372 2240 92 16 3 chr17 2819625 2819931 -86684622 + AluSx SINE Alu 1 310 -2 5152 131 30 15 chr17 2819931 2820299 -86684254 + L1MA4 LINE L1 5928 6289 -11 291 228 22 33 chr17 2820394 2820486 -86684067 - L2 LINE L2 -182 3090 3000 247 308 239 0 chr17 2821202 2821319 -86683234 - MIR3 SINE MIR -22 186 42 1430 174 0 8 chr17 2821838 2822085 -86682468 - AluJb SINE Alu -26 286 42 542 333 4 71 chr17 2822203 2822274 -86682279 + MIR SINE MIR 1 75 -187 2084 86 18 0 chr17 2822274 2822573 -86681980 - AluSg SINE Alu 0 304 1 542 333 4 71 chr17 2822573 2822755 -86681798 + MIR SINE MIR 75 238 -24 348 24 0 0 chr17 2823400 2823441 -86681112 + (CA)n Simple_repeat Simple_repeat 1 41 0 214 214 0 0 chr17 2823593 2823635 -86680918 - MIR SINE MIR -110 152 111 367 252 48 0 chr17 2823645 2823748 -86680805 + MIR SINE MIR 81 188 -74 432 323 117 68 chr17 2824420 2824668 -86679885 + MIR SINE MIR 3 262 0 317 314 191 0 chr17 2825052 2825288 -86679265 + MLT1L LTR MaLR 218 498 -117 2152 101 0 13 chr17 2825522 2825820 -86678733 - AluSg SINE Alu -16 294 1 22 0 0 0 chr17 2826330 2826352 -86678201 + AT_rich Low_complexity Low_complexity 1 22 0 544 167 0 0 chr17 2826352 2826436 -86678117 - FLAM_C SINE Alu -25 118 35 2189 92 7 23 chr17 2826503 2826809 -86677744 + AluSx SINE Alu 1 301 -11 1099 194 45 4 chr17 2826901 2827148 -86677405 + MER7A DNA MER2_type 1 255 -91 321 197 58 88 chr17 2827165 2827302 -86677251 + MER7A DNA MER2_type 214 346 0 303 308 121 11 chr17 2827353 2827535 -86677018 - MIR SINE MIR -29 233 32 246 105 0 0 chr17 2827645 2827683 -86676870 + (A)n Simple_repeat Simple_repeat 1 38 0 210 37 0 0 chr17 2828659 2828686 -86675867 + (T)n Simple_repeat Simple_repeat 1 27 0 1369 105 51 39 chr17 2828833 2829090 -86675463 + AluSq SINE Alu 46 305 -8 2354 79 0 19 chr17 2829472 2829790 -86674763 + AluSx SINE Alu 1 312 0 2424 62 7 0 chr17 2830334 2830640 -86673913 - AluSc SINE Alu -1 308 1 400 331 51 11 chr17 2831414 2831589 -86672964 - MIR SINE MIR 0 262 81 213 380 26 9 chr17 2831702 2831815 -86672738 + MIR SINE MIR 23 137 -71 368 302 0 0 chr17 2831934 2832030 -86672523 - L3 LINE CR1 -78 1499 1404 548 330 90 67 chr17 2832865 2833963 -86670590 + L2 LINE L2 2131 3258 -14 2384 75 0 0 chr17 2833967 2834261 -86670292 + AluY SINE Alu 1 294 -17 2310 93 0 10 chr17 2834270 2834581 -86669972 + AluSx SINE Alu 1 308 -4 226 286 88 23 chr17 2835644 2835804 -86668749 - MIR SINE MIR -70 192 23 213 219 109 78 chr17 2835876 2835940 -86668613 + MER5A DNA MER1_type 59 124 -65 209 311 118 37 chr17 2837514 2837675 -86666878 + MIR SINE MIR 65 238 -24 453 203 142 14 chr17 2837827 2837975 -86666578 - MIR3 SINE MIR -15 193 27 2158 112 13 0 chr17 2838439 2838742 -86665811 + AluSg SINE Alu 1 307 -3 2234 104 0 3 chr17 2840451 2840758 -86663795 + AluSx SINE Alu 1 306 -6 270 95 0 0 chr17 2840875 2840917 -86663636 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 838 127 0 0 chr17 2840917 2841035 -86663518 - FLAM_C SINE Alu -25 118 1 2071 116 30 3 chr17 2842748 2843049 -86661504 - AluSg SINE Alu -1 309 1 509 202 0 0 chr17 2843627 2843721 -86660832 + FRAM SINE Alu 68 161 -15 255 320 0 13 chr17 2843831 2843906 -86660647 - MIR SINE MIR -12 250 177 370 268 183 0 chr17 2844695 2844860 -86659693 - MIR SINE MIR -60 148 6 262 395 0 0 chr17 2844858 2844993 -86659560 + MIR SINE MIR 31 140 -68 * 2202 75 0 4 chr17 2845585 2845864 -86658689 + AluSq SINE Alu 1 278 -35 231 36 0 0 chr17 2845864 2845892 -86658661 + (CAAT)n Simple_repeat Simple_repeat 3 30 0 488 307 84 6 chr17 2846439 2846605 -86657948 + MIR3 SINE MIR 5 183 -25 235 198 88 77 chr17 2846612 2846645 -86657908 + HsTC2 DNA Tc2 1 32 -1866 1692 159 0 36 chr17 2846645 2846947 -86657606 - AluJb SINE Alu -21 291 1 235 198 88 77 chr17 2846947 2847004 -86657549 + HsTC2 DNA Tc2 32 92 -1806 200 59 29 0 chr17 2847092 2847126 -86657427 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2115 96 0 7 chr17 2847128 2847408 -86657145 - AluSc SINE Alu -31 278 1 609 210 11 81 chr17 2847409 2847465 -86657088 - MIR SINE MIR -65 197 139 2041 101 7 42 chr17 2847465 2847771 -86656782 - AluSg SINE Alu -15 295 1 609 210 11 81 chr17 2847771 2847900 -86656653 - MIR SINE MIR -123 139 25 223 279 29 0 chr17 2847909 2847977 -86656576 + GA-rich Low_complexity Low_complexity 5 74 0 232 271 0 0 chr17 2847979 2848027 -86656526 - L2 LINE L2 -15 3257 3210 226 165 0 196 chr17 2848157 2848254 -86656299 - L1M3 LINE L1 -653 5527 5450 2346 89 0 0 chr17 2848259 2848562 -86655991 - AluY SINE Alu -8 303 1 1557 110 0 13 chr17 2848562 2848736 -86655817 - AluSg/x SINE Alu -5 307 135 2056 125 0 3 chr17 2848736 2849032 -86655521 - AluSg SINE Alu -15 295 1 1557 110 0 13 chr17 2849032 2849084 -86655469 - AluSg/x SINE Alu -177 135 84 299 295 19 38 chr17 2849270 2849375 -86655178 + L2 LINE L2 3208 3310 -3 226 286 29 0 chr17 2849966 2850036 -86654517 + CT-rich Low_complexity Low_complexity 1 72 0 306 350 0 8 chr17 2850795 2850812 -86653741 + MIR SINE MIR 22 38 -224 2285 95 0 3 chr17 2850812 2851116 -86653437 - AluSx SINE Alu -9 303 1 306 350 0 8 chr17 2851116 2851215 -86653338 + MIR SINE MIR 38 137 -125 207 273 82 45 chr17 2851330 2851440 -86653113 - L2 LINE L2 -12 3301 3188 2421 65 3 3 chr17 2851464 2851773 -86652780 - AluSg SINE Alu 0 310 2 243 0 0 0 chr17 2852578 2852605 -86651948 + (TG)n Simple_repeat Simple_repeat 2 28 0 2270 103 0 0 chr17 2852614 2852914 -86651639 - AluSx SINE Alu -12 300 1 23 33 0 0 chr17 2852919 2852949 -86651604 + AT_rich Low_complexity Low_complexity 1 30 0 807 222 5 31 chr17 2853294 2853488 -86651065 + MIR SINE MIR 47 235 -27 1830 138 46 0 chr17 2853517 2853800 -86650753 - AluSx SINE Alu -16 296 1 2284 85 3 3 chr17 2853820 2854115 -86650438 - AluSq SINE Alu -16 297 3 2114 126 3 0 chr17 2854115 2854416 -86650137 - AluSx SINE Alu -10 302 1 4337 163 29 12 chr17 2854577 2855084 -86649469 - L1MA5 LINE L1 -4 6296 5770 1989 113 12 41 chr17 2855084 2855404 -86649149 - AluSx SINE Alu -1 311 1 4337 163 29 12 chr17 2855404 2855653 -86648900 - L1MA5 LINE L1 -530 5770 5527 2151 93 0 17 chr17 2856123 2856296 -86648257 - AluSx SINE Alu -10 302 135 249 108 0 0 chr17 2856296 2856333 -86648220 + (TA)n Simple_repeat Simple_repeat 2 38 0 2151 93 0 17 chr17 2856333 2856460 -86648093 - AluSx SINE Alu -177 135 7 468 175 34 73 chr17 2857098 2857123 -86647430 - HAL1 LINE L1 -335 2172 2148 2453 62 0 7 chr17 2857123 2857428 -86647125 - AluY SINE Alu -8 303 1 468 175 34 73 chr17 2857428 2857579 -86646974 - HAL1 LINE L1 -359 2148 2003 1833 174 23 0 chr17 2857579 2857883 -86646670 - AluJo SINE Alu -1 311 1 1132 224 74 55 chr17 2858044 2858253 -86646300 - HAL1 LINE L1 -809 1698 1494 2349 96 0 3 chr17 2858253 2858566 -86645987 - AluSx SINE Alu 0 312 1 1132 224 74 55 chr17 2858566 2858776 -86645777 - HAL1 LINE L1 -1013 1494 1271 681 277 49 71 chr17 2858783 2859291 -86645262 - MLT1G LTR MaLR -51 539 38 263 229 169 0 chr17 2859326 2859444 -86645109 - HAL1 LINE L1 -1254 1253 1116 2266 83 0 40 chr17 2859457 2859783 -86644770 - AluSq SINE Alu 0 313 1 251 253 12 24 chr17 2859783 2859866 -86644687 - HAL1 LINE L1 -2425 82 1 906 101 0 0 chr17 2860450 2860569 -86643984 + AluSq/x SINE Alu 15 133 -179 2069 114 0 26 chr17 2860582 2860888 -86643665 + AluSx SINE Alu 1 298 -14 364 270 9 18 chr17 2861521 2861632 -86642921 + MER113 DNA MER1_type? 84 193 -328 627 288 83 0 chr17 2861778 2861983 -86642570 + MIR SINE MIR 2 223 -39 2239 82 0 3 chr17 2862028 2862320 -86642233 - AluSx SINE Alu -21 291 1 242 322 42 17 chr17 2862857 2862975 -86641578 + MIR SINE MIR 20 140 -68 2197 116 0 3 chr17 2863497 2863808 -86640745 + AluSq SINE Alu 1 310 -3 1534 102 204 8 chr17 2863857 2864102 -86640451 - AluSg1 SINE Alu -16 293 1 1980 130 31 0 chr17 2864362 2864654 -86639899 - AluJb SINE Alu -11 301 1 461 293 140 0 chr17 2865216 2865373 -86639180 - MIR SINE MIR -26 236 58 948 212 9 4 chr17 2865387 2865617 -86638936 - L1MB7 LINE L1 -158 6026 5801 2108 73 3 28 chr17 2865635 2865953 -86638600 - AluY SINE Alu 0 311 1 2074 114 3 3 chr17 2865955 2866245 -86638308 - AluSx SINE Alu -14 298 9 22 35 0 0 chr17 2866254 2866283 -86638270 + AT_rich Low_complexity Low_complexity 1 29 0 547 236 0 0 chr17 2866283 2866410 -86638143 - L1MB7 LINE L1 -355 5829 5703 180 0 0 0 chr17 2866807 2866827 -86637726 + (CAT)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr17 2866869 2866892 -86637661 + AT_rich Low_complexity Low_complexity 1 23 0 2283 76 0 0 chr17 2866894 2867184 -86637369 - AluSq SINE Alu -23 290 1 431 228 60 54 chr17 2867207 2867356 -86637197 - MIR SINE MIR -103 159 10 880 241 55 8 chr17 2868380 2868637 -86635916 - MLT1C LTR MaLR 0 467 199 2156 116 0 7 chr17 2868660 2868961 -86635592 - AluSx SINE Alu -13 299 1 354 45 0 0 chr17 2870973 2871017 -86633536 + (TG)n Simple_repeat Simple_repeat 1 44 0 590 249 133 0 chr17 2871100 2871265 -86633288 - MER5A DNA MER1_type -2 187 1 2222 97 0 3 chr17 2871325 2871625 -86632928 - AluSq SINE Alu -14 299 1 240 86 0 0 chr17 2872526 2872561 -86631992 + (TCCC)n Simple_repeat Simple_repeat 3 37 0 1375 254 178 6 chr17 2873292 2873793 -86630760 - MLT1K LTR MaLR 0 588 2 431 263 9 171 chr17 2873797 2874143 -86630410 - L2 LINE L2 -25 3247 2958 519 301 75 0 chr17 2874148 2874255 -86630298 + MER5A DNA MER1_type 4 130 -59 2278 75 3 0 chr17 2874255 2874548 -86630005 - AluSg SINE Alu -16 294 1 519 301 75 0 chr17 2874548 2874613 -86629940 + MER5A DNA MER1_type 130 189 0 754 311 179 19 chr17 2874667 2875171 -86629382 - L2 LINE L2 -410 2904 2482 1507 187 33 0 chr17 2875171 2875444 -86629109 - AluJo SINE Alu -25 287 6 754 311 179 19 chr17 2875444 2875678 -86628875 - L2 LINE L2 -832 2482 2048 216 0 0 0 chr17 2925860 2925884 -86578669 + (TGGGGG)n Simple_repeat Simple_repeat 1 24 0 747 196 32 31 chr17 2926235 2926543 -86578010 + MER31B LTR ERV1 1 390 -76 415 185 25 0 chr17 2926516 2926597 -86577956 + MER67D LTR ERV1 432 514 0 * 519 208 68 59 chr17 2926724 2926926 -86577627 - LTR16B LTR ERVL -17 447 241 2501 65 0 0 chr17 2926926 2927235 -86577318 + AluSg1 SINE Alu 1 309 0 519 208 68 59 chr17 2927235 2927268 -86577285 - LTR16B LTR ERVL -223 241 210 1551 202 91 142 chr17 2928158 2928941 -86575612 + LTR41 LTR ERVL 25 767 -6 2511 112 10 8 chr17 2929511 2929896 -86574657 - L1PB3 LINE L1 0 6154 5769 5912 53 21 7 chr17 2929896 2930652 -86573901 - L1PA7 LINE L1 -1 6153 5387 1423 225 209 23 chr17 2930659 2931299 -86573254 - HAL1 LINE L1 -296 2211 1453 377 306 70 32 chr17 2931634 2931863 -86572690 - L1M4 LINE L1 -1458 4688 4469 2138 105 0 0 chr17 2931863 2932158 -86572395 - AluSx SINE Alu -17 295 1 377 306 70 32 chr17 2932158 2932434 -86572119 - L1M4 LINE L1 -1677 4469 4164 329 296 141 68 chr17 2932531 2932913 -86571640 - L1M4 LINE L1 -1832 4314 3905 2024 81 7 20 chr17 2934742 2935038 -86569515 - AluSx SINE Alu -20 292 1 285 29 0 0 chr17 2935487 2935521 -86569032 + (TG)n Simple_repeat Simple_repeat 1 34 0 350 253 24 12 chr17 2935915 2935998 -86568555 - L2 LINE L2 -2 3311 3228 216 357 104 25 chr17 2936117 2936397 -86568156 + L2 LINE L2 2511 2812 -502 790 273 52 26 chr17 2936421 2936688 -86567865 + LTR16A LTR ERVL 9 282 -168 1123 193 73 46 chr17 2936688 2937051 -86567502 + MLT1A1 LTR MaLR 1 396 0 257 300 115 8 chr17 2937074 2937204 -86567349 + LTR16A LTR ERVL 307 450 0 1702 190 34 58 chr17 2937614 2937729 -86566824 - L1M2 LINE L1 -583 5708 5592 1601 174 0 17 chr17 2937729 2938023 -86566530 - AluJb SINE Alu -22 290 2 1702 190 34 58 chr17 2938023 2938776 -86565777 - L1M2 LINE L1 -699 5592 4314 * 4597 141 42 21 chr17 2938753 2939746 -86564807 - L1PA16 LINE L1 0 6166 5123 2178 168 13 2 chr17 2939734 2940127 -86564426 - L1M2 LINE L1 -1945 4201 3805 * 1369 280 24 53 chr17 2940217 2940712 -86563841 - L1M3f LINE L1 -4752 598 99 1345 125 5 5 chr17 2940712 2940920 -86563633 - L1PA10 LINE L1 -15 6153 5946 1369 280 24 53 chr17 2940920 2941017 -86563536 - L1M3f LINE L1 -5251 99 1 21 0 0 0 chr17 2941028 2941049 -86563504 + AT_rich Low_complexity Low_complexity 1 21 0 1274 176 75 80 chr17 2941088 2941464 -86563089 + MLT1A2 LTR MaLR 1 374 0 189 107 0 0 chr17 2941561 2941589 -86562964 + (T)n Simple_repeat Simple_repeat 1 28 0 1521 120 4 41 chr17 2941617 2942568 -86561985 - L1PB1 LINE L1 0 6151 5236 304 284 197 0 chr17 2942719 2942846 -86561707 + MIR SINE MIR 41 192 -70 24 0 0 0 chr17 2944059 2944083 -86560470 + AT_rich Low_complexity Low_complexity 1 24 0 3516 195 127 11 chr17 2944283 2945340 -86559213 - Charlie1 DNA MER1_type -1 2760 1582 430 284 75 50 chr17 2945351 2946163 -86558390 - L1M4 LINE L1 -2212 3934 3103 494 148 10 0 chr17 2948537 2948638 -86555915 - L1PA16 LINE L1 0 6166 6065 311 330 165 21 chr17 2948643 2948831 -86555722 + MIR SINE MIR 47 261 -1 22 70 0 0 chr17 2949380 2949423 -86555130 + AT_rich Low_complexity Low_complexity 1 43 0 267 295 93 49 chr17 2949543 2949726 -86554827 - L2 LINE L2 -288 3025 2835 1689 194 0 0 chr17 2950167 2950461 -86554092 - AluJo SINE Alu -18 294 1 1870 152 3 3 chr17 2950493 2950783 -86553770 + AluJb SINE Alu 1 290 -22 1942 130 0 0 chr17 2951071 2951348 -86553205 - AluSx SINE Alu -21 291 15 21 36 0 0 chr17 2951358 2951386 -86553167 + AT_rich Low_complexity Low_complexity 1 28 0 13067 133 19 13 chr17 2951397 2953660 -86550893 - Tigger1 DNA MER2_type 0 2418 142 619 257 79 3 chr17 2953677 2953992 -86550561 + L1M4 LINE L1 2637 2975 -3171 850 88 0 0 chr17 2954006 2954131 -86550422 + L1PBa LINE L1 1 125 -6738 268 300 73 27 chr17 2954601 2954711 -86549842 + L2 LINE L2 3138 3252 -20 25 0 0 0 chr17 2955021 2955046 -86549507 + AT_rich Low_complexity Low_complexity 1 25 0 2063 127 7 0 chr17 2955046 2955338 -86549215 - AluSx SINE Alu -18 294 1 182 352 56 28 chr17 2956190 2956332 -86548221 + L3 LINE CR1 1420 1565 -12 219 272 124 53 chr17 2956916 2957085 -86547468 + MER5A DNA MER1_type 9 189 0 328 305 37 0 chr17 2957456 2957620 -86546933 - L1M4 LINE L1 -1034 5348 5179 351 324 101 47 chr17 2958281 2958559 -86545994 + L1MEd LINE L1 571 863 -5256 1177 261 109 49 chr17 2958573 2959384 -86545169 - L1ME3A LINE L1 -73 6097 5195 567 88 0 0 chr17 2959384 2959464 -86545089 + MADE1 DNA Mariner 1 80 0 1177 261 109 49 chr17 2959464 2959805 -86544748 - L1ME3A LINE L1 -975 5195 4876 1298 176 53 68 chr17 2959817 2960041 -86544512 - L1MA9 LINE L1 0 6312 6086 1661 197 0 7 chr17 2960041 2960330 -86544223 + AluJo SINE Alu 1 287 -25 180 0 0 0 chr17 2960330 2960350 -86544203 + (CCA)n Simple_repeat Simple_repeat 1 20 0 1298 176 53 68 chr17 2960350 2960504 -86544049 - L1MA9 LINE L1 -224 6088 5939 2297 149 96 2 chr17 2960520 2960997 -86543556 - L1MA2 LINE L1 0 6304 5783 6278 219 53 30 chr17 2961022 2961170 -86543383 - L1M1 LINE L1 -1822 5743 5600 2176 62 0 0 chr17 2961170 2961446 -86543107 - L1PA7 LINE L1 0 6154 5879 6278 219 53 30 chr17 2961446 2963240 -86541313 - L1M1 LINE L1 -1965 5600 3850 1546 173 66 36 chr17 2963240 2963604 -86540949 - THE1C LTR MaLR 0 375 1 8711 134 50 42 chr17 2963609 2965174 -86539379 - MSTA-int LTR MaLR 0 1580 3 1651 156 186 14 chr17 2965176 2965541 -86539012 - MSTA LTR MaLR 0 428 1 6278 219 53 30 chr17 2965541 2965791 -86538762 - L1M1 LINE L1 -3718 3847 3489 503 250 15 7 chr17 2965818 2965954 -86538599 - L1M4 LINE L1 -5861 452 316 917 174 15 55 chr17 2966010 2966211 -86538342 - AluJo SINE Alu 0 312 120 239 227 0 0 chr17 2966232 2966298 -86538255 - L1M1 LINE L1 -4185 3380 3315 4037 263 26 59 chr17 2966371 2967831 -86536722 - L1M1 LINE L1 -4868 2628 1217 3372 88 24 41 chr17 2967855 2968204 -86536349 - L1PB1 LINE L1 -1 6150 5812 180 0 0 0 chr17 2968204 2968224 -86536329 + (TG)n Simple_repeat Simple_repeat 2 21 0 3372 88 24 41 chr17 2968224 2968409 -86536144 - L1PB1 LINE L1 -339 5812 5625 336 293 198 6 chr17 3069561 3069728 -86434825 + MIR SINE MIR 64 262 0 2134 248 44 113 chr17 3070597 3072543 -86432010 + L1M4c LINE L1 739 2584 -3798 781 143 0 9 chr17 3072543 3072655 -86431898 + FLAM_C SINE Alu 11 121 -22 2134 248 44 113 chr17 3072655 3073121 -86431432 + L1M4c LINE L1 2584 3080 -3302 452 202 0 0 chr17 3073190 3073292 -86431261 - L1P LINE L1 -2736 3410 3309 1130 165 20 5 chr17 3073305 3073505 -86431048 + L1 LINE L1 4282 4484 -1898 20353 153 16 18 chr17 3073505 3074616 -86429937 + L1P3 LINE L1 208 1320 -5141 207 0 0 0 chr17 3074616 3074639 -86429914 + (CAA)n Simple_repeat Simple_repeat 2 24 0 20353 153 16 18 chr17 3074639 3077987 -86426566 + L1P3 LINE L1 1320 4721 -1740 904 128 61 4 chr17 3077964 3078130 -86426423 + L1MA4 LINE L1 6438 6606 -20 * 292 337 98 0 chr17 3078565 3078728 -86425825 - MIR SINE MIR -78 184 6 1113 144 17 0 chr17 3079285 3079458 -86425095 - AluSg/x SINE Alu 0 312 137 215 339 83 9 chr17 3079791 3079900 -86424653 + MIR SINE MIR 19 135 -73 222 237 17 17 chr17 3080071 3080130 -86424423 + GA-rich Low_complexity Low_complexity 5 63 0 2147 121 3 3 chr17 3080639 3080946 -86423607 + AluSx SINE Alu 1 307 -5 2360 245 91 29 chr17 3081365 3081976 -86422577 - L1ME3A LINE L1 -69 6170 5598 3305 184 59 3 chr17 3081976 3082617 -86421936 - L1MA4 LINE L1 0 6300 5624 2360 245 91 29 chr17 3082617 3083274 -86421279 - L1ME3A LINE L1 -641 5598 4817 1973 127 52 14 chr17 3083318 3083609 -86420944 - AluSx SINE Alu -10 302 1 1366 173 8 25 chr17 3083609 3083852 -86420701 + MLT1A1 LTR MaLR 127 365 0 663 292 97 23 chr17 3083881 3084501 -86420052 - L1ME3A LINE L1 -4921 1475 810 1821 166 0 0 chr17 3085389 3085673 -86418880 + AluSx SINE Alu 6 289 -23 461 385 48 20 chr17 3085904 3086299 -86418254 + L2 LINE L2 2572 2977 -337 2123 114 23 0 chr17 3086654 3086953 -86417600 + AluSx SINE Alu 1 306 -6 2426 120 61 79 chr17 3087535 3087907 -86416646 + Tigger2a DNA MER2_type 1 365 -2343 8945 25 16 246 chr17 3087907 3089700 -86414853 - SVA Other Other -5 1381 2 2426 120 61 79 chr17 3089700 3089769 -86414784 + Tigger2a DNA MER2_type 365 434 0 215 306 0 59 chr17 3089860 3089945 -86414608 - MIR SINE MIR -61 147 68 2312 107 0 0 chr17 3090286 3090586 -86413967 - AluSq SINE Alu -13 300 1 229 297 54 0 chr17 3090903 3090977 -86413576 - L2 LINE L2 -13 3300 3223 700 306 207 35 chr17 3091130 3091340 -86413213 - L2 LINE L2 -407 2907 2734 2471 80 0 6 chr17 3091340 3091654 -86412899 - AluSx SINE Alu 0 312 1 700 306 207 35 chr17 3091654 3092337 -86412216 - L2 LINE L2 -580 2734 1860 2009 129 14 0 chr17 3093733 3094028 -86410525 - AluSx SINE Alu -13 299 1 392 284 204 35 chr17 3094308 3094426 -86410127 - MIR SINE MIR -3 259 162 2224 112 0 0 chr17 3094426 3094744 -86409809 + AluSx SINE Alu 1 318 0 392 284 204 35 chr17 3094744 3094825 -86409728 - MIR SINE MIR -100 162 25 609 303 83 30 chr17 3095008 3095404 -86409149 - Charlie8 DNA MER1_type -27 2390 1974 2392 33 25 0 chr17 3095410 3095726 -86408827 - L1PA5 LINE L1 0 6154 5862 389 185 188 55 chr17 3095739 3095770 -86408783 + Zaphod DNA AcHobo 568 594 -3437 2385 81 0 3 chr17 3095770 3096067 -86408486 - AluSq SINE Alu -17 296 1 389 185 188 55 chr17 3096067 3096360 -86408193 + Zaphod DNA AcHobo 594 935 -3096 846 102 18 13 chr17 3096414 3096552 -86408001 - L1PA8 LINE L1 -6 6162 6022 * 9784 167 60 98 chr17 3096541 3097689 -86406864 - L1 LINE L1 -960 5186 3996 840 257 6 6 chr17 3097689 3097868 -86406685 + MER8 DNA MER2_type 1 179 -60 328 270 0 0 chr17 3097843 3097906 -86406647 + MER2 DNA MER2_type 282 344 -1 * 9784 167 60 98 chr17 3097906 3099259 -86405294 - L1 LINE L1 -2188 3958 2572 1882 134 7 37 chr17 3099484 3099783 -86404770 + AluSx SINE Alu 6 295 -17 2482 170 29 56 chr17 3100256 3100414 -86404139 + MER70A LTR ERVL 1 162 -310 2293 67 0 7 chr17 3100414 3100697 -86403856 + L1PA8 LINE L1 5892 6172 0 2482 170 29 56 chr17 3100697 3101021 -86403532 + MER70A LTR ERVL 162 470 -2 398 249 203 23 chr17 3101122 3101299 -86403254 - MIR SINE MIR -51 211 3 211 391 78 5 chr17 3101679 3101871 -86402682 - L2 LINE L2 -510 2804 2599 374 216 0 0 chr17 3103704 3103778 -86400775 + MER116 DNA Mariner 3 76 -4 479 312 53 70 chr17 3104085 3104441 -86400112 + L2 LINE L2 2431 2780 -534 524 310 114 63 chr17 3104489 3104902 -86399651 + L2 LINE L2 2817 3250 -22 1947 120 3 50 chr17 3105028 3105329 -86399224 - AluSx SINE Alu -25 287 1 2125 119 0 29 chr17 3105645 3105956 -86398597 - AluSx SINE Alu -10 302 1 312 287 111 59 chr17 3106049 3106394 -86398159 + L1M4 LINE L1 4799 5168 -978 2855 40 69 3 chr17 3106394 3106740 -86397813 + L1PA3 LINE L1 5787 6155 0 312 287 111 59 chr17 3106740 3106781 -86397772 + L1M4 LINE L1 5168 5205 -941 209 338 40 0 chr17 3106901 3106975 -86397578 - MIR SINE MIR -166 96 20 1853 133 0 58 chr17 3107209 3107518 -86397035 - AluSx SINE Alu -16 296 6 574 55 0 0 chr17 3108983 3109056 -86395497 + Alu SINE Alu 2 74 -236 937 201 26 0 chr17 3159095 3159284 -86345269 + MLT1A1 LTR MaLR 171 364 -1 188 395 18 30 chr17 3159285 3159452 -86345101 + L2 LINE L2 2475 2639 -675 712 202 40 0 chr17 3159512 3159685 -86344868 - L1MA4 LINE L1 -4 6296 6117 728 325 41 14 chr17 3159740 3160085 -86344468 + L2 LINE L2 2077 2430 -884 757 231 78 0 chr17 3160106 3160362 -86344191 + MLT1A1 LTR MaLR 2 277 -88 1984 114 7 37 chr17 3161962 3162260 -86342293 - AluSq SINE Alu -24 289 1 2275 169 19 2 chr17 3162260 3162679 -86341874 - L1MA5 LINE L1 -258 6042 5617 348 273 69 18 chr17 3162688 3163021 -86341532 - L1 LINE L1 -1593 4553 4204 462 154 22 0 chr17 3163125 3163216 -86341337 + L1ME2 LINE L1 5880 5972 -192 613 158 0 0 chr17 3163266 3163361 -86341192 - AluS SINE Alu -217 95 1 445 281 31 23 chr17 3163374 3163634 -86340919 - L1 LINE L1 -2145 4001 3740 1866 119 43 12 chr17 3163945 3164273 -86340280 - L1MA4 LINE L1 -6 6294 5957 685 325 31 7 chr17 3164784 3165199 -86339354 - HAL1b LINE L1 -703 645 221 585 147 9 0 chr17 3166642 3166751 -86337802 - L1MA9 LINE L1 -349 5963 5854 680 145 69 19 chr17 3166754 3166913 -86337640 + L1MA7 LINE L1 6124 6290 -1 1732 65 24 116 chr17 3166979 3167271 -86337282 - AluYb8 SINE Alu -8 310 46 1144 73 0 0 chr17 3167271 3167407 -86337146 - AluSq/x SINE Alu -177 136 1 662 162 9 0 chr17 3167437 3167582 -86336971 + AluSg/x SINE Alu 182 327 0 1026 70 7 0 chr17 3167637 3167791 -86336762 - L1P4 LINE L1 -489 5672 5512 10249 170 5 13 chr17 3167851 3169884 -86334669 + L1P LINE L1 2976 4992 -1154 1462 241 48 95 chr17 3169880 3170308 -86334245 + L1M4 LINE L1 4098 4545 -1601 * 6380 73 18 14 chr17 3170308 3171719 -86332834 + L1PA10 LINE L1 4724 6168 0 1462 241 48 95 chr17 3171719 3172081 -86332472 + L1M4 LINE L1 4545 4923 -1223 351 0 0 0 chr17 3172081 3172120 -86332433 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 680 13 0 0 chr17 3172120 3172199 -86332354 - L1PA2 LINE L1 -11 6144 6066 1462 241 48 95 chr17 3172199 3172370 -86332183 + L1M4 LINE L1 4921 5015 -1131 313 349 50 26 chr17 3172595 3173051 -86331502 + MERVL LTR ERVL 4867 5333 -152 951 60 51 31 chr17 3174292 3174614 -86329939 + (TCTA)n Simple_repeat Simple_repeat 1 328 0 1566 172 23 10 chr17 3174632 3174940 -86329613 - MLT2D LTR ERVL -48 366 55 3340 55 23 5 chr17 3174940 3175380 -86329173 + L1PA8 LINE L1 5725 6172 0 851 347 90 53 chr17 3175788 3176808 -86327745 - L2 LINE L2 -11 3261 2200 2141 136 10 7 chr17 3176808 3177300 -86327253 - AluSx SINE Alu 0 312 1 851 347 90 53 chr17 3177300 3177561 -86326992 - L2 LINE L2 -1072 2200 1950 22 0 0 0 chr17 3179048 3179070 -86325483 + AT_rich Low_complexity Low_complexity 1 22 0 1937 168 0 3 chr17 3179070 3179380 -86325173 - AluJo SINE Alu -3 309 1 1890 112 12 0 chr17 3179390 3179668 -86324885 - AluSg SINE Alu 0 310 28 2409 84 3 0 chr17 3180016 3180324 -86324229 + AluY SINE Alu 1 309 -2 1026 70 7 0 chr17 3180564 3180718 -86323835 + L1P3 LINE L1 5512 5672 -489 288 0 0 0 chr17 3180773 3180805 -86323748 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1807 99 3 127 chr17 3180807 3181139 -86323414 - AluSx SINE Alu -17 295 5 384 349 34 19 chr17 3181164 3181433 -86323120 + L2 LINE L2 2174 2446 -868 286 187 0 27 chr17 3181889 3181964 -86322589 + L1M4 LINE L1 4577 4649 -1497 26 0 0 0 chr17 3182314 3182340 -86322213 + AT_rich Low_complexity Low_complexity 1 26 0 27 0 0 0 chr17 3182508 3182535 -86322018 + AT_rich Low_complexity Low_complexity 1 27 0 350 273 53 17 chr17 3182605 3182773 -86321780 + L1M4 LINE L1 5197 5367 -779 2034 145 0 0 chr17 3182823 3183159 -86321394 + AluSx SINE Alu 1 336 0 976 233 44 28 chr17 3183271 3183708 -86320845 - L1ME2 LINE L1 -88 6076 4829 913 42 42 0 chr17 3183708 3183827 -86320726 - L1PA13 LINE L1 -3 6160 6037 379 226 24 24 chr17 3183837 3183969 -86320584 - L1ME1 LINE L1 -339 5827 5701 547 83 42 0 chr17 3184011 3184107 -86320446 - L1PA13 LINE L1 -121 6042 5943 * 3348 170 16 12 chr17 3184096 3184768 -86319785 + L1P LINE L1 4324 4998 -1148 254 169 113 0 chr17 3184748 3184819 -86319734 - L1ME2 LINE L1 -1285 4861 4783 * 318 281 39 59 chr17 3185087 3185290 -86319263 - HAL1b LINE L1 -654 694 496 29 70 0 0 chr17 3185655 3185712 -86318841 + AT_rich Low_complexity Low_complexity 1 57 0 305 212 42 76 chr17 3185967 3186085 -86318468 - L1MC4 LINE L1 -138 7904 7791 2296 240 83 11 chr17 3186773 3187519 -86317034 - L1ME2 LINE L1 0 6164 5365 2166 110 7 10 chr17 3187776 3188077 -86316476 - AluSx SINE Alu -12 300 1 324 352 83 26 chr17 3188095 3188359 -86316194 + L1ME3 LINE L1 5688 5966 -196 1985 118 3 20 chr17 3188653 3188958 -86315595 + AluSx SINE Alu 1 300 -12 612 206 168 29 chr17 3190479 3190688 -86313865 + MIR SINE MIR 7 244 -18 234 82 68 41 chr17 3190694 3190767 -86313786 + (TCTA)n Simple_repeat Simple_repeat 2 76 0 26 0 0 0 chr17 3190992 3191018 -86313535 + AT_rich Low_complexity Low_complexity 1 26 0 2394 59 3 20 chr17 3191386 3191692 -86312861 - AluY SINE Alu -10 301 1 195 25 75 25 chr17 3191824 3191864 -86312689 + A-rich Low_complexity Low_complexity 4 45 0 526 253 126 16 chr17 3192096 3192278 -86312275 + L2 LINE L2 3112 3313 0 653 232 41 5 chr17 3193623 3193817 -86310736 + L1MA9 LINE L1 6073 6273 -39 1942 127 22 0 chr17 3193974 3194250 -86310303 + AluSx SINE Alu 1 310 0 253 0 0 0 chr17 3194250 3194278 -86310275 + (CAAAA)n Simple_repeat Simple_repeat 3 65 0 2614 37 0 3 chr17 3194736 3195034 -86309519 - AluY SINE Alu -14 297 1 529 213 7 85 chr17 3195583 3195698 -86308855 + MER5B DNA MER1_type 10 114 -64 2497 57 0 7 chr17 3195698 3195995 -86308558 - AluSc SINE Alu -13 296 2 529 213 7 85 chr17 3195995 3196020 -86308533 + MER5B DNA MER1_type 114 139 -39 631 239 6 44 chr17 3196284 3196443 -86308110 - MER5B DNA MER1_type -20 158 6 1983 99 32 7 chr17 3196597 3196879 -86307674 + AluY SINE Alu 1 289 -22 202 337 22 11 chr17 3197030 3197119 -86307434 + L3 LINE CR1 1483 1572 -5 269 94 47 16 chr17 3197446 3197510 -86307043 + CT-rich Low_complexity Low_complexity 1 66 0 2353 91 3 0 chr17 3197691 3197988 -86306565 - AluSp SINE Alu -15 298 1 348 275 69 30 chr17 3199777 3199908 -86304645 + MIR SINE MIR 61 196 -66 1829 171 7 3 chr17 3199970 3200275 -86304278 + AluJb SINE Alu 1 306 -6 7402 54 30 0 chr17 3200381 3201541 -86303012 - L1PA7 LINE L1 0 6154 4991 268 171 184 40 chr17 3201541 3201617 -86302936 + MLT1E2 LTR MaLR 3 89 -537 419 192 0 7 chr17 3201618 3201721 -86302832 - L1PB4 LINE L1 -68 6086 5987 * 758 213 11 32 chr17 3201712 3201900 -86302653 - L1PB4 LINE L1 -35 6121 5938 * 1238 227 64 24 chr17 3201894 3202269 -86302284 - L1ME LINE L1 -5230 840 451 28 0 0 0 chr17 3202327 3202355 -86302198 + AT_rich Low_complexity Low_complexity 1 28 0 264 100 0 0 chr17 3202710 3202750 -86301803 + (A)n Simple_repeat Simple_repeat 1 40 0 300 258 16 0 chr17 3202784 3202846 -86301707 + Tigger3(Golem) DNA MER2_type 1 63 -2966 855 127 19 83 chr17 3202859 3203016 -86301537 + Tigger3(Golem) DNA MER2_type 2882 3028 -1 525 259 77 79 chr17 3203017 3203458 -86301095 + L1ME LINE L1 5379 5818 -303 237 98 0 0 chr17 3203550 3203591 -86300962 + (TG)n Simple_repeat Simple_repeat 2 42 0 184 79 79 0 chr17 3205600 3205638 -86298915 + T-rich Low_complexity Low_complexity 2 42 0 3472 83 7 2 chr17 3208151 3208596 -86295957 + L1PA10 LINE L1 5722 6168 0 22 0 0 0 chr17 3208633 3208655 -86295898 + AT_rich Low_complexity Low_complexity 1 22 0 770 286 64 75 chr17 3208884 3209707 -86294846 + HAL1b LINE L1 98 911 -437 308 246 16 82 chr17 3209752 3209874 -86294679 + HAL1b LINE L1 794 907 -441 441 293 145 40 chr17 3210521 3210920 -86293633 + L1M4 LINE L1 2680 3120 -3026 187 318 118 0 chr17 3213030 3213115 -86291438 + MIR SINE MIR 58 152 -56 415 301 34 0 chr17 3214202 3214348 -86290205 + MIR SINE MIR 64 214 -48 462 316 7 0 chr17 3214419 3214555 -86289998 - MIR SINE MIR -75 187 51 2271 107 0 0 chr17 3214742 3215040 -86289513 + AluSx SINE Alu 1 298 -14 7933 40 5 0 chr17 3215154 3216352 -86288201 - L1PA5 LINE L1 0 6154 4957 5004 36 24 36 chr17 3216352 3217010 -86287543 + L1PA5 LINE L1 4309 4958 -1188 336 278 128 0 chr17 3217006 3217139 -86287414 + L1ME2 LINE L1 5511 5660 -502 * 494 332 80 27 chr17 3217395 3217922 -86286631 + L1M4 LINE L1 4733 5287 -859 2229 118 0 16 chr17 3217924 3218230 -86286323 + AluSc SINE Alu 1 301 -8 1070 106 0 0 chr17 3218238 3218379 -86286174 + AluSg/x SINE Alu 154 294 -18 248 70 23 0 chr17 3218382 3218425 -86286128 + (TA)n Simple_repeat Simple_repeat 2 45 0 204 120 40 20 chr17 3218442 3218492 -86286061 + (TA)n Simple_repeat Simple_repeat 1 51 0 893 247 151 49 chr17 3218576 3219107 -86285446 - L1MEc LINE L1 -5781 615 31 1475 224 71 6 chr17 3219256 3219608 -86284945 + L1ME2 LINE L1 5769 6143 -21 299 248 78 43 chr17 3220325 3220466 -86284087 + L2 LINE L2 3168 3313 0 1562 182 36 0 chr17 3220634 3220914 -86283639 - AluJo SINE Alu -22 290 1 236 331 88 11 chr17 3222963 3223144 -86281409 - L2 LINE L2 -791 2523 2329 2253 95 0 0 chr17 3223375 3223685 -86280868 - AluSx SINE Alu 0 310 1 2087 126 3 0 chr17 3227110 3227404 -86277149 - AluSx SINE Alu -17 295 1 227 390 70 0 chr17 3228244 3228344 -86276209 + L2 LINE L2 3141 3247 -25 23 68 0 0 chr17 3228846 3228890 -86275663 + AT_rich Low_complexity Low_complexity 1 44 0 5927 139 30 0 chr17 3229169 3230182 -86274371 - L1PA16 LINE L1 -3 6163 5131 192 226 274 0 chr17 3231133 3231195 -86273358 - MIR SINE MIR -107 155 77 511 262 16 40 chr17 3231957 3232155 -86272398 + MIR SINE MIR 10 200 -54 318 258 262 40 chr17 3233153 3233428 -86271125 - L1MC/D LINE L1 -496 5625 5408 369 221 26 0 chr17 3233717 3233794 -86270759 - MER58 DNA MER1_type -1 2419 2341 33 0 0 0 chr17 3233803 3233836 -86270717 + AT_rich Low_complexity Low_complexity 1 33 0 39276 38 5 1 chr17 3233839 3239319 -86265234 - L1PA4 LINE L1 0 6155 656 373 286 117 35 chr17 3239354 3239637 -86264916 - L1MC/D LINE L1 -896 5250 4945 2338 102 0 3 chr17 3239670 3239973 -86264580 - AluSx SINE Alu -10 302 1 262 114 0 0 chr17 3240160 3240195 -86264358 + U2 snRNA snRNA 1 35 -153 4224 99 11 0 chr17 3240240 3240794 -86263759 - L1PA11 LINE L1 0 6174 5615 441 127 0 0 chr17 3240796 3240867 -86263686 + L1P4 LINE L1 5017 5087 -1059 1198 28 0 14 chr17 3240868 3241010 -86263543 + MER11A LTR ERVK 1 140 -1126 13748 31 1 0 chr17 3241018 3243332 -86261221 - L1PA2 LINE L1 -2 6153 3838 22201 40 24 2 chr17 3243333 3247186 -86257367 - L1P LINE L1 -2157 3989 2 4256 127 30 33 chr17 3247186 3248155 -86256398 + MER11A LTR ERVK 119 1266 0 2796 85 3 2 chr17 3248155 3248692 -86255861 + L1P4 LINE L1 5083 5619 -549 266 161 107 0 chr17 3248684 3248740 -86255813 - L1MB4 LINE L1 -36 6144 6083 * 1393 144 21 20 chr17 3248712 3248992 -86255561 - L1MA4 LINE L1 -243 6054 5772 409 290 38 8 chr17 3249111 3249242 -86255311 - L1M4 LINE L1 -1533 4613 4479 331 345 98 0 chr17 3249480 3249674 -86254879 - L1MB4 LINE L1 -2341 5467 5255 22 35 0 0 chr17 3249970 3249999 -86254554 + AT_rich Low_complexity Low_complexity 1 29 0 312 244 35 35 chr17 3250123 3250209 -86254344 - MIR SINE MIR -53 209 124 760 129 23 0 chr17 3251595 3251727 -86252826 - L1MB3 LINE L1 -2 6181 6047 39333 81 12 7 chr17 3251742 3257854 -86246699 - L1PA5 LINE L1 -8 6146 12 334 235 81 78 chr17 3258591 3258617 -86245936 + MLT1K LTR MaLR 32 56 -532 2083 196 112 39 chr17 3258617 3259128 -86245425 + LTR55 LTR ERV 1 548 0 334 235 81 78 chr17 3259128 3259337 -86245216 + MLT1K LTR MaLR 56 298 -290 370 244 0 0 chr17 3259396 3259478 -86245075 - MLT1K LTR MaLR -138 450 369 955 261 127 54 chr17 3259647 3260409 -86244144 + HAL1 LINE L1 637 1454 -1053 243 284 26 32 chr17 3260464 3260587 -86243966 + L1ME LINE L1 3 126 -5944 714 99 18 9 chr17 3260606 3260717 -86243836 - L1MA7 LINE L1 -409 5882 5771 642 137 10 0 chr17 3260717 3260819 -86243734 - L1MA2 LINE L1 0 6304 6202 230 265 0 44 chr17 3260821 3260889 -86243664 + MLT1K LTR MaLR 217 281 -307 4334 116 22 22 chr17 3260966 3261655 -86242898 - L1MA2 LINE L1 -107 6197 5509 434 37 0 0 chr17 3261657 3261711 -86242842 - L1MA2 LINE L1 -895 5407 5354 8101 32 0 0 chr17 3261711 3262854 -86241699 - L1PA3 LINE L1 0 6155 5013 30731 35 1 0 chr17 3262854 3266511 -86238042 + L1PA3 LINE L1 1344 5001 -1145 8039 195 31 83 chr17 3266513 3268141 -86236412 - L1 LINE L1 -783 6782 5072 1843 106 44 7 chr17 3268141 3268414 -86236139 - L1MA1 LINE L1 0 6302 6020 8039 195 31 83 chr17 3268414 3268778 -86235775 - L1 LINE L1 -2493 5072 4691 489 211 11 0 chr17 3268778 3268868 -86235685 - AluJb SINE Alu -11 301 211 8039 195 31 83 chr17 3268868 3269895 -86234658 - L1 LINE L1 -2874 4691 3970 261 0 0 0 chr17 3269895 3269924 -86234629 + (TC)n Simple_repeat Simple_repeat 2 30 0 8039 195 31 83 chr17 3269924 3270954 -86233599 - L1 LINE L1 -3595 3970 2889 316 167 11 67 chr17 3270969 3271059 -86233494 + L1M4 LINE L1 3398 3482 -2664 258 274 49 55 chr17 3271863 3272027 -86232526 + L1MC1 LINE L1 5837 5999 -334 * 1495 149 15 8 chr17 3271909 3272171 -86232382 + L1MB3 LINE L1 5881 6144 -39 811 152 0 30 chr17 3272176 3272308 -86232245 - AluJo SINE Alu -176 136 9 322 302 0 0 chr17 3272601 3272707 -86231846 + L1M4 LINE L1 3465 3570 -2576 6734 206 9 7 chr17 3272712 3274156 -86230397 - L1P LINE L1 -2972 3174 1728 * 20845 40 1 1 chr17 3274151 3277163 -86227390 - L1PA5 LINE L1 -271 5883 2870 6280 142 21 16 chr17 3277139 3278146 -86226407 - MSTA-int LTR MaLR -566 1014 3 * 1961 143 178 22 chr17 3278148 3278518 -86226035 - MSTA LTR MaLR 0 428 1 1813 153 54 15 chr17 3278680 3279014 -86225539 - L1MA7 LINE L1 0 6291 5945 1950 134 62 3 chr17 3279014 3279321 -86225232 + L1M2 LINE L1 5434 5758 -533 429 287 71 71 chr17 3279932 3280214 -86224339 - MLT1I LTR MaLR 0 409 128 254 216 67 97 chr17 3280272 3280406 -86224147 - LTR67 LTR ERVL -17 540 411 312 333 8 17 chr17 3281342 3281462 -86223091 - MLT1L LTR MaLR -355 260 142 192 233 0 0 chr17 3281619 3281662 -86222891 + MIR SINE MIR 61 103 -159 10899 198 44 79 chr17 3281678 3282051 -86222502 - L1PB2 LINE L1 -2 6865 6481 225 232 0 0 chr17 3282051 3282107 -86222446 + LTR66 LTR ERVL 398 453 -157 10899 198 44 79 chr17 3282107 3284274 -86220279 - L1PB2 LINE L1 -386 6481 4241 1981 141 7 3 chr17 3284274 3284573 -86219980 - AluJb SINE Alu -12 300 1 10899 198 44 79 chr17 3284573 3285105 -86219448 - L1PB2 LINE L1 -2626 4241 3692 6207 60 21 57 chr17 3285105 3287289 -86217264 - SVA Other Other -518 1379 54 875 34 26 0 chr17 3287289 3287406 -86217147 + (GGGAGA)n Simple_repeat Simple_repeat 4 123 0 10899 198 44 79 chr17 3287406 3289210 -86215343 - L1PB2 LINE L1 -3174 3693 1828 2268 96 0 0 chr17 3289210 3289503 -86215050 - L1PB1 LINE L1 -1 6150 5858 10899 198 44 79 chr17 3289503 3289657 -86214896 - L1PB2 LINE L1 -5039 1828 1670 320 77 39 0 chr17 3289657 3289709 -86214844 - Alu SINE Alu 0 302 249 10899 198 44 79 chr17 3289709 3289801 -86214752 - L1PB2 LINE L1 -5197 1670 1576 2070 139 10 0 chr17 3289801 3290104 -86214449 - AluSx SINE Alu -6 306 1 10899 198 44 79 chr17 3290104 3291760 -86212793 - L1PB2 LINE L1 -5291 1576 1 409 275 107 0 chr17 3291772 3291903 -86212650 + MIR SINE MIR 117 261 -1 980 244 14 3 chr17 3292217 3292470 -86212083 + L1ME LINE L1 5419 5669 -493 2410 187 120 21 chr17 3292539 3293192 -86211361 - MER52A LTR ERV1 -955 800 4 313 294 24 0 chr17 3293439 3293524 -86211029 - MIR3 SINE MIR -45 163 77 21 0 0 0 chr17 3295817 3295838 -86208715 + AT_rich Low_complexity Low_complexity 1 21 0 200 261 58 0 chr17 3296118 3296187 -86208366 - MIR SINE MIR -93 169 97 297 303 42 34 chr17 3296229 3296348 -86208205 + L2 LINE L2 2953 3072 -200 246 312 21 64 chr17 3297181 3297322 -86207231 + L2 LINE L2 2933 3067 -205 656 292 88 22 chr17 3297539 3297813 -86206740 + L3 LINE CR1 1137 1428 -149 414 258 207 23 chr17 3297857 3298075 -86206478 - MIR SINE MIR -6 256 3 34 84 0 0 chr17 3298409 3298492 -86206061 + AT_rich Low_complexity Low_complexity 1 83 0 967 193 63 19 chr17 3299145 3299352 -86205201 + MER58A DNA MER1_type 1 216 -8 2359 59 3 11 chr17 3299353 3299663 -86204890 + AluSp SINE Alu 1 308 0 244 118 55 47 chr17 3299813 3299940 -86204613 + (TAGA)n Simple_repeat Simple_repeat 1 128 0 606 206 168 29 chr17 3299946 3300155 -86204398 - MIR SINE MIR -18 244 7 21 0 0 0 chr17 3301062 3301083 -86203470 + GC_rich Low_complexity Low_complexity 1 21 0 1992 118 3 20 chr17 3301677 3301982 -86202571 - AluSx SINE Alu -12 300 1 2253 106 0 10 chr17 3302558 3302861 -86201692 + AluSx SINE Alu 1 300 -12 2594 241 92 13 chr17 3303073 3303864 -86200689 + L1ME2 LINE L1 5311 6164 0 263 212 42 76 chr17 3304552 3304670 -86199883 + L1MC4 LINE L1 7791 7904 -138 29 70 0 0 chr17 3304925 3304982 -86199571 + AT_rich Low_complexity Low_complexity 1 57 0 373 267 81 59 chr17 3305332 3305568 -86198985 + HAL1b LINE L1 476 716 -632 288 169 113 0 chr17 3305818 3305889 -86198664 + L1ME2 LINE L1 4783 4861 -1285 * 3658 164 19 15 chr17 3305869 3306541 -86198012 - L1P LINE L1 -1148 4998 4324 584 118 43 14 chr17 3306530 3306661 -86197892 + L1PA13 LINE L1 5943 6072 -93 * 435 225 78 35 chr17 3306668 3306810 -86197743 + L1ME2 LINE L1 5701 5848 -316 980 42 42 0 chr17 3306810 3306929 -86197624 + L1PA13 LINE L1 6037 6160 -3 1128 227 50 35 chr17 3306929 3307366 -86197187 + L1ME2 LINE L1 4829 6076 -88 2022 145 0 0 chr17 3307478 3307814 -86196739 - AluSx SINE Alu 0 336 1 342 273 53 17 chr17 3307864 3308032 -86196521 - L1M4 LINE L1 -779 5367 5197 27 0 0 0 chr17 3308102 3308129 -86196424 + AT_rich Low_complexity Low_complexity 1 27 0 26 0 0 0 chr17 3308297 3308323 -86196230 + AT_rich Low_complexity Low_complexity 1 26 0 282 274 88 49 chr17 3308442 3308748 -86195805 - L1M4 LINE L1 -1252 4894 4577 378 346 34 19 chr17 3309204 3309473 -86195080 - L2 LINE L2 -868 2446 2174 1811 99 3 127 chr17 3309498 3309861 -86194692 + AluSx SINE Alu 5 326 0 1100 70 7 0 chr17 3309916 3310070 -86194483 - L1P4 LINE L1 -489 5672 5512 2430 81 3 0 chr17 3310310 3310618 -86193935 - AluY SINE Alu -2 309 1 1887 112 12 0 chr17 3310966 3311244 -86193309 + AluSg SINE Alu 28 310 0 1918 168 0 3 chr17 3311254 3311564 -86192989 + AluJo SINE Alu 1 309 -3 22 0 0 0 chr17 3311564 3311586 -86192967 + AT_rich Low_complexity Low_complexity 1 22 0 736 339 85 60 chr17 3313073 3313334 -86191219 + L2 LINE L2 1950 2203 -1069 2122 136 10 7 chr17 3313334 3313826 -86190727 + AluSx SINE Alu 1 312 0 736 339 85 60 chr17 3313826 3314850 -86189703 + L2 LINE L2 2203 3261 -11 3574 55 23 5 chr17 3315258 3315698 -86188855 - L1PA8 LINE L1 0 6172 5725 1705 172 23 10 chr17 3315698 3316006 -86188547 + MLT2D LTR ERVL 55 366 -48 951 60 51 31 chr17 3316024 3316346 -86188207 + (TAGA)n Simple_repeat Simple_repeat 1 328 0 1894 242 53 84 chr17 3318268 3318423 -86186130 - L1M4 LINE L1 -1131 5015 4857 728 53 21 21 chr17 3318423 3318557 -86185996 + L1PA2 LINE L1 6050 6183 0 1894 242 53 84 chr17 3318557 3318919 -86185634 - L1M4 LINE L1 -1289 4857 4485 6859 73 63 0 chr17 3318919 3320330 -86184223 - L1PA10 LINE L1 0 6168 4724 1894 242 53 84 chr17 3320330 3320758 -86183795 - L1M4 LINE L1 -1661 4485 4098 * 11904 172 7 18 chr17 3320754 3322813 -86181740 - L1P LINE L1 -1154 4992 2957 2046 115 11 3 chr17 3322813 3323099 -86181454 - AluSx SINE Alu -22 290 3 11904 172 7 18 chr17 3323099 3323257 -86181296 - L1P LINE L1 -3189 2957 2799 969 134 15 0 chr17 3323754 3323888 -86180665 + AluJo SINE Alu 1 136 -176 300 179 0 0 chr17 3323892 3323948 -86180605 - L1P LINE L1 -2085 4061 4006 778 156 170 7 chr17 3323967 3324102 -86180451 + AluJo SINE Alu 134 290 -22 246 62 0 0 chr17 3324357 3324389 -86180164 + (TG)n Simple_repeat Simple_repeat 1 32 0 2303 86 3 0 chr17 3324613 3324904 -86179649 - AluSp SINE Alu -21 292 1 349 270 79 53 chr17 3325292 3325444 -86179109 - MIR SINE MIR -43 219 64 1957 83 0 30 chr17 3325932 3326198 -86178355 + AluY SINE Alu 49 306 -5 251 273 13 0 chr17 3327686 3327763 -86176790 + GA-rich Low_complexity Low_complexity 1 78 0 2322 86 3 29 chr17 3328033 3328347 -86176206 + AluSg SINE Alu 5 310 0 191 269 30 30 chr17 3328358 3328425 -86176128 - L3 LINE CR1 -28 1549 1483 2249 82 0 7 chr17 3328576 3328867 -86175686 - AluY SINE Alu -22 289 1 260 192 39 0 chr17 3328872 3328924 -86175629 + MER5B DNA MER1_type 125 178 0 24 53 0 0 chr17 3329379 3329417 -86175136 + AT_rich Low_complexity Low_complexity 1 38 0 2452 88 0 0 chr17 3329775 3330083 -86174470 + AluSq SINE Alu 1 308 -5 546 253 67 108 chr17 3330089 3330295 -86174258 - L1M4 LINE L1 -1945 4201 3988 378 0 0 0 chr17 3330295 3330337 -86174216 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1775 144 0 11 chr17 3330342 3330605 -86173948 - AluSx SINE Alu -52 260 1 546 253 67 108 chr17 3330605 3330883 -86173670 - L1M4 LINE L1 -2162 3984 3731 2033 119 43 12 chr17 3331189 3331517 -86173036 - L1MA4 LINE L1 -6 6294 5957 797 318 41 11 chr17 3332014 3332454 -86172099 - HAL1b LINE L1 -689 659 207 634 147 9 0 chr17 3333886 3333995 -86170558 - L1MA9 LINE L1 -349 5963 5854 764 145 69 19 chr17 3333998 3334157 -86170396 + L1MA7 LINE L1 6124 6290 -1 2138 63 21 102 chr17 3334223 3334558 -86169995 - AluYb8 SINE Alu -8 310 3 772 223 36 72 chr17 3334608 3334859 -86169694 - L1MA9 LINE L1 -5 6286 6045 568 250 96 14 chr17 3336183 3336391 -86168162 - L2 LINE L2 0 3313 3089 269 297 48 41 chr17 3337556 3337701 -86166852 + MIR3 SINE MIR 31 176 -32 2318 93 0 37 chr17 3338144 3338467 -86166086 + AluSq SINE Alu 1 311 -2 369 301 41 67 chr17 3338622 3338967 -86165586 - L1ME LINE L1 -303 5818 5483 33 66 0 0 chr17 3339017 3339078 -86165475 + AT_rich Low_complexity Low_complexity 1 61 0 320 304 112 0 chr17 3339086 3339211 -86165342 - MIR SINE MIR -12 250 112 362 52 86 35 chr17 3339313 3339371 -86165182 - L1PA15 LINE L1 -3 6162 6102 4979 100 4 1 chr17 3339414 3340093 -86164460 - L1PA13 LINE L1 -49 6114 5434 12220 90 9 0 chr17 3340096 3341668 -86162885 - HERVL LTR ERVL -3328 2326 740 5767 87 10 33 chr17 3341673 3342158 -86162395 + L1PA10 LINE L1 5361 5821 -347 2086 101 11 0 chr17 3342158 3342436 -86162117 - AluSx SINE Alu -22 290 10 5767 87 10 33 chr17 3342436 3342774 -86161779 + L1PA10 LINE L1 5821 6165 -3 * 11353 163 41 18 chr17 3342756 3346042 -86158511 + L1MA5 LINE L1 2929 6290 -10 5138 30 0 0 chr17 3346269 3346866 -86157687 + L1PA3 LINE L1 5556 6152 -3 30 27 0 0 chr17 3347093 3347130 -86157423 + AT_rich Low_complexity Low_complexity 1 37 0 1214 330 96 53 chr17 3348517 3349230 -86155323 + L2 LINE L2 1907 2587 -685 2576 58 0 0 chr17 3349230 3349539 -86155014 - AluY SINE Alu -2 309 1 1214 330 96 53 chr17 3349539 3349835 -86154718 + L2 LINE L2 2587 2869 -403 2474 74 7 3 chr17 3349835 3350145 -86154408 - AluY SINE Alu 0 311 1 1214 330 96 53 chr17 3350145 3350430 -86154123 + L2 LINE L2 2869 3261 -11 2285 99 0 3 chr17 3350465 3350768 -86153785 - AluSp SINE Alu -11 302 1 521 207 131 77 chr17 3351512 3351709 -86152844 - MER5A DNA MER1_type 0 189 14 310 263 153 25 chr17 3351732 3351850 -86152703 + MER5B DNA MER1_type 46 178 0 211 365 22 62 chr17 3352430 3352704 -86151849 - L2 LINE L2 -358 2956 2694 627 301 10 5 chr17 3353195 3353401 -86151152 - ERVL LTR ERVL -617 5147 4941 585 305 10 5 chr17 3353944 3354141 -86150412 - ERVL LTR ERVL -858 4906 4709 327 280 11 21 chr17 3354152 3354245 -86150308 + L2 LINE L2 3221 3312 -1 383 321 18 14 chr17 3354247 3354468 -86150085 - L1M4 LINE L1 -2004 4142 3921 2724 239 65 21 chr17 3355615 3356661 -86147892 + L1ME3A LINE L1 5088 6165 -5 198 200 0 0 chr17 3356720 3356760 -86147793 - L2 LINE L2 -13 3300 3261 * 465 322 83 10 chr17 3356726 3356931 -86147622 - MIR SINE MIR -13 249 30 471 351 40 68 chr17 3357096 3357523 -86147030 + L2 LINE L2 2832 3246 -26 181 206 0 0 chr17 3357493 3357527 -86147026 + MIR SINE MIR 213 246 -16 * 262 284 11 34 chr17 3358141 3358229 -86146324 + MIR3 SINE MIR 14 99 -109 974 182 34 62 chr17 3358251 3358542 -86146011 - L1MA9 LINE L1 -38 6274 5992 193 391 11 11 chr17 3358542 3358634 -86145919 + MIR SINE MIR 91 182 -80 337 215 126 22 chr17 3359066 3359201 -86145352 + MLT1K LTR MaLR 374 522 -66 809 200 12 0 chr17 3359971 3360136 -86144417 + MLT1E2 LTR MaLR 460 626 0 192 158 0 0 chr17 3360287 3360325 -86144228 + (TA)n Simple_repeat Simple_repeat 1 38 0 1163 154 72 16 chr17 3360351 3360779 -86143774 - MLT1D LTR MaLR 0 505 10 268 226 19 0 chr17 3360774 3360827 -86143726 - MLT1D LTR MaLR -451 54 1 * 186 43 0 0 chr17 3361336 3361359 -86143194 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 496 299 102 39 chr17 3361475 3361729 -86142824 - L2 LINE L2 0 3313 3044 314 289 136 34 chr17 3362143 3362481 -86142072 - LTR33 LTR ERVL -130 393 22 188 384 89 7 chr17 3362583 3362729 -86141824 - L2 LINE L2 -352 2962 2805 901 188 41 64 chr17 3362758 3362976 -86141577 + MER58A DNA MER1_type 12 224 0 350 262 108 8 chr17 3363794 3363946 -86140607 - MIR SINE MIR -58 150 25 1958 157 3 3 chr17 3364356 3364656 -86139897 - AluJb SINE Alu -12 300 1 695 187 251 12 chr17 3364779 3365030 -86139523 - MER69 DNA AcHobo 0 2526 2216 518 200 20 0 chr17 3365046 3365146 -86139407 - AluJo SINE Alu -90 222 121 433 162 27 18 chr17 3365146 3365257 -86139296 - MER69 DNA AcHobo -314 2212 2101 1524 134 4 0 chr17 3365274 3365513 -86139040 - Tigger1 DNA MER2_type -2177 241 2 5437 219 51 73 chr17 3365520 3366171 -86138382 + L1M4c LINE L1 2420 3084 -3298 2374 97 0 10 chr17 3366171 3366481 -86138072 + AluSc SINE Alu 2 308 -1 5437 219 51 73 chr17 3366481 3366815 -86137738 + L1M4c LINE L1 3084 3424 -2958 2382 80 3 0 chr17 3366815 3367114 -86137439 + AluSc SINE Alu 1 300 -9 5437 219 51 73 chr17 3367114 3368133 -86136420 + L1M4c LINE L1 3424 4355 -2027 1215 190 31 0 chr17 3368133 3368359 -86136194 + MER46A DNA MER2_type 1 233 -3 5437 219 51 73 chr17 3368359 3368780 -86135773 + L1M4c LINE L1 4355 4784 -1598 8994 20 6 0 chr17 3368803 3370627 -86133926 - L1PA3 LINE L1 0 6155 4325 11481 133 91 5 chr17 3370627 3373064 -86131489 + L1MA9 LINE L1 3065 5800 -512 2065 100 16 53 chr17 3373064 3373384 -86131169 + AluSq SINE Alu 1 308 -5 11481 133 91 5 chr17 3373384 3373908 -86130645 + L1MA9 LINE L1 5800 6278 -34 2154 113 0 7 chr17 3373920 3374211 -86130342 - AluSx SINE Alu -23 289 1 22 56 0 0 chr17 3374445 3374481 -86130072 + AT_rich Low_complexity Low_complexity 1 36 0 300 291 38 13 chr17 3374711 3374790 -86129763 - MIR3 SINE MIR -30 178 98 1980 162 0 19 chr17 3375012 3375327 -86129226 + AluJo SINE Alu 3 311 -1 848 121 86 17 chr17 3375590 3375764 -86128789 - MER53 DNA DNA -1 188 3 22 88 0 0 chr17 3376120 3376177 -86128376 + AT_rich Low_complexity Low_complexity 1 57 0 301 256 44 0 chr17 3376219 3376309 -86128244 + MIR SINE MIR 132 225 -37 217 316 0 13 chr17 3376894 3376970 -86127583 + GA-rich Low_complexity Low_complexity 2 76 0 3327 152 34 7 chr17 3377724 3378310 -86126243 - MER7C DNA MER2_type 0 602 1 189 74 0 0 chr17 3378314 3378341 -86126212 + (CTATT)n Simple_repeat Simple_repeat 4 30 0 201 143 0 0 chr17 3378413 3378448 -86126105 + (TCTCCC)n Simple_repeat Simple_repeat 4 38 0 494 316 124 0 chr17 3379287 3379496 -86125057 + MIR SINE MIR 21 255 -7 233 229 114 14 chr17 3379487 3379557 -86124996 - MIR SINE MIR -95 113 37 * 267 303 55 9 chr17 3379937 3380046 -86124507 - L2 LINE L2 -25 3247 3134 23 0 0 0 chr17 3380591 3380614 -86123939 + AT_rich Low_complexity Low_complexity 1 23 0 967 193 32 32 chr17 3380669 3380740 -86123813 - L1MB7 LINE L1 -1 6183 6113 2388 87 3 3 chr17 3380740 3381052 -86123501 - AluSq SINE Alu -1 312 1 967 193 32 32 chr17 3381052 3381229 -86123324 - L1MB7 LINE L1 -70 6114 5935 302 231 102 54 chr17 3381253 3381400 -86123153 - L1MB7 LINE L1 -367 5754 5601 994 251 39 7 chr17 3382230 3382694 -86121859 - LTR33 LTR ERVL -3 518 1 1798 89 20 16 chr17 3382756 3383076 -86121477 + AluSq SINE Alu 39 359 0 271 290 0 81 chr17 3383557 3383681 -86120872 - MIR SINE MIR -115 147 34 785 178 53 0 chr17 3385329 3385481 -86119072 + LTR45B LTR ERV1 3 162 -327 2151 102 3 7 chr17 3385482 3385785 -86118768 - AluY SINE Alu -9 302 1 896 59 0 0 chr17 3385786 3385888 -86118665 - AluSq/x SINE Alu -177 136 35 1042 130 35 130 chr17 3385891 3386206 -86118347 + LTR12 LTR ERV1 1 285 -429 234 237 0 0 chr17 3386206 3386265 -86118288 + LTR30 LTR ERV1 552 610 -112 710 185 39 0 chr17 3386269 3386399 -86118154 + LTR12 LTR ERV1 349 483 -231 366 121 0 15 chr17 3386795 3386861 -86117692 - MSTA LTR MaLR -363 65 1 1071 262 111 25 chr17 3386895 3387338 -86117215 + MLT1E LTR MaLR 1 481 -112 427 135 34 149 chr17 3387329 3387401 -86117152 + Charlie5 DNA MER1_type 2334 2382 -242 * 2234 114 3 0 chr17 3387401 3387707 -86116846 + AluSc SINE Alu 1 307 -2 427 135 34 149 chr17 3387707 3387782 -86116771 + Charlie5 DNA MER1_type 2382 2464 -160 702 149 54 0 chr17 3387840 3387988 -86116565 + Charlie5 DNA MER1_type 2469 2624 0 488 248 74 0 chr17 3388499 3388648 -86115905 + MER105 DNA DNA 3 162 -42 230 171 0 0 chr17 3388647 3388688 -86115865 - MER105 DNA DNA -162 42 2 * 2890 194 41 68 chr17 3388908 3389466 -86115087 + L1MCa LINE L1 7 283 -5624 2112 132 0 3 chr17 3389466 3389762 -86114791 - AluSq SINE Alu -18 295 1 2890 194 41 68 chr17 3389762 3390519 -86114034 + L1MCa LINE L1 283 1058 -4849 1812 175 29 14 chr17 3390563 3390911 -86113642 + MLT1A1 LTR MaLR 13 365 0 1407 186 49 16 chr17 3390911 3391369 -86113184 + L1MCa LINE L1 1087 1530 -4896 1388 180 34 3 chr17 3391376 3391671 -86112882 + L1MA9 LINE L1 6009 6312 0 330 322 51 73 chr17 3391676 3391949 -86112604 + L1MC/D LINE L1 5433 5699 -2109 7857 31 0 0 chr17 3391949 3392923 -86111630 - L1PA2 LINE L1 -1786 4360 3387 8849 23 1 0 chr17 3392923 3394730 -86109823 + L1PA2 LINE L1 4346 6153 -2 1118 28 0 14 chr17 3394738 3394880 -86109673 - MER11A LTR ERVK -1126 140 1 430 141 0 0 chr17 3394881 3394959 -86109594 - L1P LINE L1 -1059 5087 5010 3934 99 11 0 chr17 3394959 3395508 -86109045 + L1PA11 LINE L1 5615 6174 0 244 114 0 0 chr17 3395553 3395588 -86108965 - U2 snRNA snRNA -153 35 1 6992 61 17 54 chr17 3395877 3397525 -86107028 + SVA Other Other 200 1383 -3 199 319 121 17 chr17 3397547 3397663 -86106890 - L3 LINE CR1 -48 1529 1402 1047 190 121 6 chr17 3398361 3398655 -86105898 - MLT1A1 LTR MaLR 0 374 4 313 344 15 8 chr17 3399706 3399837 -86104716 - MER5A DNA MER1_type -3 186 55 245 236 0 132 chr17 3400212 3400318 -86104235 + MIR SINE MIR 28 119 -143 666 272 112 4 chr17 3400334 3400566 -86103987 + MIR SINE MIR 6 262 0 261 307 59 20 chr17 3400785 3400886 -86103667 + MIR SINE MIR 17 121 -87 1924 70 4 0 chr17 3401602 3401843 -86102710 + AluSq SINE Alu 64 305 -8 2443 63 0 7 chr17 3402195 3402498 -86102055 + AluY SINE Alu 1 301 -10 2227 87 0 0 chr17 3402600 3402876 -86101677 + AluSx SINE Alu 1 276 -36 242 114 0 23 chr17 3402888 3402932 -86101621 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 180 0 0 0 chr17 3402934 3402954 -86101599 + (GGAAA)n Simple_repeat Simple_repeat 1 20 0 211 255 268 33 chr17 3404169 3404322 -86100231 + MIR SINE MIR 74 262 0 197 298 21 53 chr17 3404679 3404773 -86099780 + L3 LINE CR1 1279 1369 -208 22 56 0 0 chr17 3404819 3404855 -86099698 + AT_rich Low_complexity Low_complexity 1 36 0 2261 86 11 0 chr17 3405218 3405522 -86099031 - AluSq SINE Alu 0 308 2 194 314 80 51 chr17 3406585 3406760 -86097793 + MIR SINE MIR 17 196 -66 2304 65 0 0 chr17 3408635 3408911 -86095642 + AluY SINE Alu 35 310 -1 2439 68 0 10 chr17 3409328 3409623 -86094930 + AluY SINE Alu 1 292 -19 309 361 90 25 chr17 3410192 3410547 -86094006 + L2 LINE L2 2369 2746 -568 487 255 64 43 chr17 3410834 3411022 -86093531 - MLT1J LTR MaLR -13 498 307 1748 172 0 33 chr17 3411540 3411620 -86092933 + AluJo SINE Alu 1 82 -230 4191 118 25 67 chr17 3411620 3412341 -86092212 - LTR8 LTR ERV1 0 691 1 1748 172 0 33 chr17 3412341 3412563 -86091990 + AluJo SINE Alu 82 293 -19 230 333 65 38 chr17 3413930 3414116 -86090437 + MIR SINE MIR 46 236 -26 24 0 0 0 chr17 3414196 3414220 -86090333 + AT_rich Low_complexity Low_complexity 1 24 0 1356 37 0 0 chr17 3414220 3414381 -86090172 - L1PA4 LINE L1 -3 6152 5992 2001 133 27 3 chr17 3415082 3415383 -86089170 - AluSx SINE Alu -4 308 1 263 268 89 8 chr17 3415516 3415639 -86088914 + L2 LINE L2 2927 3059 -213 346 282 110 6 chr17 3415670 3415833 -86088720 - L2 LINE L2 -7 3306 3127 498 217 59 12 chr17 3415997 3416242 -86088311 - MER5C DNA MER1_type -1 323 9 1854 149 35 0 chr17 3416445 3416734 -86087819 - AluJo SINE Alu -10 302 4 869 94 0 0 chr17 3416845 3416962 -86087591 + AluSp/q SINE Alu 188 304 -9 1570 236 52 11 chr17 3417110 3417362 -86087191 - LTR40b LTR ERVL 0 462 183 2514 70 0 3 chr17 3417362 3417661 -86086892 - AluSq SINE Alu -15 298 1 1570 236 52 11 chr17 3417661 3417852 -86086701 - LTR40b LTR ERVL -279 183 1 23 33 0 0 chr17 3418166 3418196 -86086357 + AT_rich Low_complexity Low_complexity 1 30 0 339 65 0 0 chr17 3418468 3418514 -86086039 + (TG)n Simple_repeat Simple_repeat 1 46 0 404 282 126 11 chr17 3419117 3419291 -86085262 - MLT1L LTR MaLR -413 202 9 2189 131 0 0 chr17 3419802 3420108 -86084445 + AluSx SINE Alu 1 306 -6 784 228 84 60 chr17 3420984 3421410 -86083143 + L1MC2 LINE L1 5344 5776 -737 348 195 133 9 chr17 3421684 3421797 -86082756 + L1MC2 LINE L1 6218 6344 0 423 369 51 6 chr17 3422402 3422716 -86081837 + L3 LINE CR1 520 847 -730 285 360 55 6 chr17 3422720 3422884 -86081669 + L3 LINE CR1 1012 1183 -394 2174 127 7 3 chr17 3422892 3423200 -86081353 + AluSx SINE Alu 1 309 -3 222 314 59 39 chr17 3423211 3423295 -86081258 + L3 LINE CR1 1280 1370 -207 2040 153 3 0 chr17 3423295 3423603 -86080950 - AluJo SINE Alu -2 310 2 222 314 59 39 chr17 3423603 3423671 -86080882 + L3 LINE CR1 1370 1435 -142 870 257 91 103 chr17 3423888 3424414 -86080139 + MLT1H LTR MaLR 30 549 0 203 138 0 0 chr17 3424971 3425000 -86079553 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1822 98 124 0 chr17 3425034 3425300 -86079253 - AluSq SINE Alu -14 299 1 195 274 59 88 chr17 3426259 3426361 -86078192 - MER5B DNA MER1_type -4 174 76 2398 97 0 0 chr17 3426553 3426863 -86077690 - AluSg SINE Alu 0 310 1 597 269 187 35 chr17 3427171 3427577 -86076976 - L2 LINE L2 -1 3312 2845 377 214 79 84 chr17 3427719 3427781 -86076772 - MER5B DNA MER1_type -1 177 116 2270 84 10 3 chr17 3427781 3428077 -86076476 + AluY SINE Alu 1 298 -13 377 214 79 84 chr17 3428077 3428192 -86076361 - MER5B DNA MER1_type -62 116 1 312 197 46 99 chr17 3428367 3428519 -86076034 + L1ME1 LINE L1 6005 6148 -18 323 260 55 87 chr17 3428533 3428660 -86075893 - MER5B DNA MER1_type -49 129 7 294 272 0 0 chr17 3428730 3428811 -86075742 - MER5A DNA MER1_type -80 109 29 * 315 235 202 8 chr17 3428807 3428926 -86075627 + MER5A DNA MER1_type 48 189 0 1910 147 7 10 chr17 3429344 3429644 -86074909 - AluJo SINE Alu -13 299 1 299 291 86 0 chr17 3430126 3430243 -86074310 + L2 LINE L2 3187 3313 0 13983 123 48 44 chr17 3430404 3431500 -86073053 + Tigger1 DNA MER2_type 11 1101 -1317 2476 67 0 7 chr17 3431500 3431800 -86072753 - AluY SINE Alu -13 298 1 13983 123 48 44 chr17 3431800 3432665 -86071888 + Tigger1 DNA MER2_type 1101 1986 -432 2149 121 0 7 chr17 3432665 3432971 -86071582 + AluSx SINE Alu 1 304 -8 13983 123 48 44 chr17 3432971 3433406 -86071147 + Tigger1 DNA MER2_type 1986 2418 0 267 31 0 0 chr17 3434199 3434231 -86070322 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 538 231 8 45 chr17 3434788 3434922 -86069631 + MIR SINE MIR 121 249 -13 2330 108 0 3 chr17 3435541 3435855 -86068698 - AluSp SINE Alu 0 313 1 295 367 72 4 chr17 3435882 3436119 -86068434 + L2 LINE L2 2724 2976 -338 278 284 102 31 chr17 3436270 3436397 -86068156 + L2 LINE L2 3176 3311 -2 2367 104 0 0 chr17 3436746 3437054 -86067499 - AluSx SINE Alu -4 308 1 2014 125 0 3 chr17 3437675 3437964 -86066589 + AluSx SINE Alu 22 309 -3 258 105 0 0 chr17 3437985 3438023 -86066530 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 269 298 21 0 chr17 3438793 3438887 -86065666 + L1ME LINE L1 5558 5653 -468 6550 24 0 0 chr17 3439162 3439910 -86064643 + L1PA3 LINE L1 5408 6155 0 6941 55 17 0 chr17 3440214 3441181 -86063372 - L1PA8A LINE L1 -4 6127 5163 199 281 74 37 chr17 3442389 3442524 -86062029 + MIR3 SINE MIR 8 147 -61 222 235 224 20 chr17 3443033 3443131 -86061422 - L3 LINE CR1 -13 1564 1447 25 31 0 0 chr17 3445043 3445075 -86059478 + AT_rich Low_complexity Low_complexity 1 32 0 2413 103 0 0 chr17 3445095 3445406 -86059147 - AluSq SINE Alu -2 311 1 373 233 60 17 chr17 3445460 3445576 -86058977 - MIR3 SINE MIR -6 202 82 2011 111 49 0 chr17 3446406 3446694 -86057859 + AluSq SINE Alu 1 302 -11 2427 97 3 0 chr17 3446932 3447241 -86057312 + AluSq SINE Alu 1 310 -3 1093 88 0 0 chr17 3447754 3447891 -86056662 + AluSq/x SINE Alu 1 137 -175 1932 126 4 0 chr17 3447891 3448169 -86056384 + AluSx SINE Alu 1 279 -33 562 346 197 10 chr17 3448218 3448363 -86056190 - L3 LINE CR1 -2 1575 1458 2021 134 0 7 chr17 3448363 3448669 -86055884 + AluJb SINE Alu 1 304 -8 562 346 197 10 chr17 3448669 3448834 -86055719 - L3 LINE CR1 -119 1458 1325 2141 138 0 3 chr17 3448834 3449146 -86055407 - AluSx SINE Alu -1 311 1 562 346 197 10 chr17 3449146 3449438 -86055115 - L3 LINE CR1 -252 1325 859 244 173 177 0 chr17 3449459 3449524 -86055029 + MER5A DNA MER1_type 7 98 -91 1073 96 11 0 chr17 3450352 3450529 -86054024 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 780 121 0 0 chr17 3450545 3450677 -86053876 + (TGGA)n Simple_repeat Simple_repeat 3 134 0 1092 24 0 0 chr17 3450778 3450904 -86053649 + L1PA5 LINE L1 6020 6145 -9 239 327 27 9 chr17 3451253 3451363 -86053190 + L2 LINE L2 2971 3082 -190 609 184 0 0 chr17 3451428 3451537 -86053016 - MER63 DNA MER1_type 0 1060 952 1637 127 19 0 chr17 3451543 3451802 -86052751 + L1MA9 LINE L1 6044 6307 -5 840 242 33 25 chr17 3451831 3451891 -86052662 - MER63 DNA MER1_type -96 964 906 2081 125 0 3 chr17 3451891 3452178 -86052375 + AluSx SINE Alu 1 288 -24 197 32 0 32 chr17 3452178 3452209 -86052344 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2081 125 0 3 chr17 3452209 3452224 -86052329 + AluSx SINE Alu 288 302 -10 840 242 33 25 chr17 3452224 3452407 -86052146 - MER63 DNA MER1_type -154 906 719 827 170 105 0 chr17 3452409 3452609 -86051944 + MER44D DNA MER2_type 1 491 -118 2065 93 11 0 chr17 3452665 3452943 -86051610 + AluSx SINE Alu 30 310 -2 278 134 0 45 chr17 3452949 3453016 -86051537 - MER63 DNA MER1_type -746 184 121 * 677 149 0 25 chr17 3453014 3453135 -86051418 + MER44D DNA MER2_type 488 605 0 * 2000 189 38 34 chr17 3453135 3453535 -86051018 - MER63C DNA MER1_type -472 588 191 2173 114 7 0 chr17 3453535 3453841 -86050712 + AluSx SINE Alu 1 308 -4 2000 189 38 34 chr17 3453841 3453991 -86050562 - MER63C DNA MER1_type -869 191 33 258 32 0 0 chr17 3453991 3454022 -86050531 + (CA)n Simple_repeat Simple_repeat 2 32 0 2000 189 38 34 chr17 3454022 3454056 -86050497 - MER63C DNA MER1_type -1027 33 1 227 281 0 0 chr17 3454194 3454251 -86050302 + MIR SINE MIR 87 143 -65 835 188 0 0 chr17 3454787 3454920 -86049633 + FLAM_C SINE Alu 1 133 0 2171 89 0 0 chr17 3455135 3455416 -86049137 - AluSx SINE Alu -30 282 2 1097 201 82 11 chr17 3455440 3455719 -86048834 + L1MB2 LINE L1 5868 6166 -5 1958 109 31 14 chr17 3455719 3456012 -86048541 - AluSx SINE Alu -14 298 1 2108 125 3 0 chr17 3456294 3456598 -86047955 + AluSq SINE Alu 1 305 -8 322 137 0 0 chr17 3456690 3456741 -86047812 - Alu SINE Alu -244 55 5 319 294 89 89 chr17 3457233 3457682 -86046871 + L2 LINE L2 2824 3272 0 442 201 8 8 chr17 3457682 3457816 -86046737 + (TGGA)n Simple_repeat Simple_repeat 2 135 0 203 376 24 8 chr17 3457828 3457953 -86046600 + (TGGG)n Simple_repeat Simple_repeat 1 127 0 197 337 58 0 chr17 3457972 3458058 -86046495 - MIR SINE MIR -113 149 59 201 225 202 0 chr17 3458811 3458900 -86045653 + MIR3 SINE MIR 82 188 -20 401 281 51 7 chr17 3459336 3459510 -86045043 + MIR3 SINE MIR 4 184 -67 423 301 27 70 chr17 3460808 3460871 -86043682 + MER5B DNA MER1_type 1 65 -113 2296 102 3 3 chr17 3460871 3461184 -86043369 + AluSq SINE Alu 1 313 0 423 301 27 70 chr17 3461184 3461306 -86043247 + MER5B DNA MER1_type 65 178 0 1241 225 171 45 chr17 3463191 3463594 -86040959 + L2 LINE L2 2607 2958 -355 2271 93 0 0 chr17 3463594 3463894 -86040659 - AluSc SINE Alu -9 300 1 1241 225 171 45 chr17 3463894 3464105 -86040448 + L2 LINE L2 2958 3313 0 864 116 20 20 chr17 3464368 3464515 -86040038 + AluSg/x SINE Alu 161 307 -5 306 286 18 78 chr17 3464525 3464742 -86039811 + L1ME1 LINE L1 5955 6158 -8 257 267 238 0 chr17 3464868 3464973 -86039580 + MIR SINE MIR 17 146 -62 457 178 12 41 chr17 3465225 3465394 -86039159 + CT-rich Low_complexity Low_complexity 4 167 0 514 140 39 39 chr17 3465533 3465712 -86038841 + CT-rich Low_complexity Low_complexity 1 179 0 223 167 0 24 chr17 3465712 3465754 -86038799 + C-rich Low_complexity Low_complexity 2 42 0 364 276 158 43 chr17 3466100 3466404 -86038149 - L2 LINE L2 -8 3264 2926 2006 108 3 0 chr17 3466539 3466827 -86037726 + AluSq SINE Alu 21 309 -4 813 134 8 52 chr17 3467307 3467472 -86037081 - AluJo SINE Alu 0 312 166 812 141 0 8 chr17 3467616 3467737 -86036816 - AluJo SINE Alu -146 166 47 1987 96 55 17 chr17 3467834 3468125 -86036428 + AluSx SINE Alu 1 302 -10 2235 83 24 0 chr17 3468130 3468419 -86036134 + AluY SINE Alu 2 297 -14 442 318 52 87 chr17 3468438 3468804 -86035749 + L1MC4a LINE L1 5260 5255 -907 2292 85 0 0 chr17 3468804 3469097 -86035456 - AluSx SINE Alu -19 293 1 442 318 52 87 chr17 3469097 3469428 -86035125 + L1MC4a LINE L1 5254 5595 -567 1853 137 7 10 chr17 3469584 3469909 -86034644 + AluJb SINE Alu 1 312 0 23 0 0 0 chr17 3469972 3469995 -86034558 + AT_rich Low_complexity Low_complexity 1 23 0 191 273 101 30 chr17 3470061 3470160 -86034393 - MIR SINE MIR -59 203 98 773 97 142 0 chr17 3470160 3470312 -86034241 + AluSc SINE Alu 154 321 0 306 325 57 8 chr17 3470757 3470880 -86033673 - L2 LINE L2 0 3313 3185 2232 96 0 7 chr17 3471296 3471599 -86032954 + AluSx SINE Alu 1 301 -11 184 286 48 36 chr17 3471910 3471994 -86032559 + L2 LINE L2 2871 2955 -317 2251 90 10 6 chr17 3472158 3472469 -86032084 - AluSx SINE Alu 0 312 1 371 265 20 10 chr17 3472471 3472573 -86031980 + L2 LINE L2 3169 3271 -1 257 317 42 17 chr17 3473479 3473599 -86030954 + L2 LINE L2 2699 2821 -493 2197 114 3 0 chr17 3474211 3474518 -86030035 - AluSg SINE Alu -2 308 1 2111 105 0 53 chr17 3474927 3475250 -86029303 + AluSx SINE Alu 1 306 -6 203 178 0 22 chr17 3475324 3475369 -86029184 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 182 288 0 51 chr17 3475621 3475680 -86028873 - MIR SINE MIR -77 185 130 698 233 17 11 chr17 3475717 3475897 -86028656 - MER4C LTR ERV1 -9 456 276 1927 119 26 35 chr17 3475916 3476228 -86028325 + AluSx SINE Alu 1 309 -3 480 172 30 96 chr17 3476270 3476377 -86028176 - MER4C LTR ERV1 -201 349 286 2191 110 0 0 chr17 3476377 3476677 -86027876 + AluSx SINE Alu 7 306 -6 480 172 30 96 chr17 3476677 3476803 -86027750 - MER4C LTR ERV1 -264 286 153 302 295 9 0 chr17 3476840 3476907 -86027646 - MIR SINE MIR -97 111 39 1836 151 35 0 chr17 3476907 3477191 -86027362 + AluSx SINE Alu 1 294 -18 302 295 9 0 chr17 3477191 3477216 -86027337 - MIR SINE MIR -169 39 16 1958 131 3 0 chr17 3477550 3477840 -86026713 + AluSx SINE Alu 1 291 -21 284 375 18 0 chr17 3478490 3478602 -86025951 - MIR SINE MIR -62 146 33 459 222 67 22 chr17 3478978 3479113 -86025440 + MIR3 SINE MIR 33 173 -35 565 284 45 7 chr17 3479450 3479605 -86024948 - L2 LINE L2 -3 3310 3150 851 177 30 3 chr17 3479733 3480112 -86024441 + (TGGA)n Simple_repeat Simple_repeat 1 389 0 770 121 42 0 chr17 3480128 3480294 -86024259 + (TGGA)n Simple_repeat Simple_repeat 1 173 0 2542 56 0 0 chr17 3480733 3481038 -86023515 - AluY SINE Alu -6 305 1 2249 112 0 13 chr17 3482085 3482398 -86022155 - AluSg SINE Alu 0 310 2 225 0 0 0 chr17 3482398 3482423 -86022130 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 2274 81 0 3 chr17 3482423 3482708 -86021845 - AluSx SINE Alu -28 284 1 424 316 131 24 chr17 3483205 3483657 -86020896 + L2 LINE L2 2306 2805 -509 329 293 73 32 chr17 3484384 3484507 -86020046 - MIR SINE MIR -8 254 127 325 340 112 5 chr17 3485439 3485636 -86018917 - L3 LINE CR1 -396 1181 964 2246 98 3 3 chr17 3486112 3486419 -86018134 + AluSx SINE Alu 4 310 -2 188 259 129 24 chr17 3487115 3487200 -86017353 + MIR3 SINE MIR 94 187 -21 195 359 60 8 chr17 3488241 3488358 -86016195 + MIR SINE MIR 92 214 -48 551 304 63 8 chr17 3488523 3488743 -86015810 + MIR SINE MIR 32 260 -2 1419 113 24 0 chr17 3489923 3490136 -86014417 + AluSg/x SINE Alu 95 312 0 2669 150 30 35 chr17 3490264 3490640 -86013913 + L1MC1 LINE L1 5413 5786 -547 2082 130 0 9 chr17 3490640 3490955 -86013598 + AluSx SINE Alu 1 312 0 2669 150 30 35 chr17 3490955 3491145 -86013408 + L1MC1 LINE L1 5786 5976 -357 2023 136 3 3 chr17 3491145 3491447 -86013106 + AluJb SINE Alu 1 302 -10 1926 128 13 13 chr17 3491458 3491762 -86012791 + AluJo SINE Alu 1 304 -8 2114 125 3 0 chr17 3491926 3492229 -86012324 + AluSx SINE Alu 1 304 -8 583 313 99 0 chr17 3492396 3492588 -86011965 + MIR SINE MIR 2 212 -50 10561 49 14 17 chr17 3492954 3494344 -86010209 - SVA Other Other 0 1386 1 216 0 0 0 chr17 3494344 3494368 -86010185 + (GGGAGA)n Simple_repeat Simple_repeat 2 25 0 414 157 14 171 chr17 3494404 3494544 -86010009 - MER58B DNA MER1_type -1 340 223 288 172 0 0 chr17 3494550 3494608 -86009945 + (CA)n Simple_repeat Simple_repeat 2 59 0 2372 91 0 0 chr17 3495149 3495457 -86009096 + AluSq SINE Alu 1 308 -5 2089 130 0 9 chr17 3495468 3495783 -86008770 + AluSq SINE Alu 1 312 -1 2181 97 3 37 chr17 3496338 3496659 -86007894 + AluSq SINE Alu 4 313 0 318 182 11 11 chr17 3496963 3497054 -86007499 + Alu SINE Alu 241 302 0 2651 39 0 0 chr17 3497299 3497610 -86006943 + AluY SINE Alu 1 311 0 368 338 0 0 chr17 3497825 3497964 -86006589 + L1MEc LINE L1 35 173 -6223 2009 128 0 44 chr17 3498018 3498164 -86006389 + AluSx SINE Alu 1 152 -160 3139 38 0 3 chr17 3498164 3498536 -86006017 + L1PA5 LINE L1 5782 6152 -2 2009 128 0 44 chr17 3498536 3498710 -86005843 + AluSx SINE Alu 152 307 -5 370 378 15 5 chr17 3498712 3498916 -86005637 + L1MEc LINE L1 165 370 -6026 714 154 18 77 chr17 3499281 3499366 -86005187 + L1MB4 LINE L1 5978 6067 -113 1917 86 79 7 chr17 3499366 3499646 -86004907 + AluSx SINE Alu 1 300 -12 714 154 18 77 chr17 3499646 3499769 -86004784 + L1MB4 LINE L1 6067 6174 -6 2255 97 0 10 chr17 3499966 3500274 -86004279 - AluSx SINE Alu -7 305 1 844 258 22 45 chr17 3501809 3501954 -86002599 + MIR SINE MIR 2 140 -122 2276 110 0 0 chr17 3501954 3502263 -86002290 + AluSx SINE Alu 1 309 -3 844 258 22 45 chr17 3502263 3502384 -86002169 + MIR SINE MIR 140 262 0 419 238 98 0 chr17 3503365 3503487 -86001066 - MER91B DNA MER1_type -56 134 1 2645 199 30 47 chr17 3503895 3503917 -86000636 + L1MC4 LINE L1 6907 6928 -1114 1905 80 113 0 chr17 3503917 3504192 -86000361 + AluSx SINE Alu 1 306 -6 2645 199 30 47 chr17 3504192 3504453 -86000100 + L1MC4 LINE L1 6928 7192 -850 2104 118 0 0 chr17 3504453 3504749 -85999804 + AluSx SINE Alu 3 298 -14 2645 199 30 47 chr17 3504749 3505194 -85999359 + L1MC4 LINE L1 7192 7624 -418 1820 115 39 21 chr17 3505194 3505480 -85999073 + AluSx SINE Alu 1 291 -21 2289 95 0 22 chr17 3505485 3505620 -85998933 + AluSx SINE Alu 1 137 -175 2323 79 0 0 chr17 3505620 3505918 -85998635 + AluY SINE Alu 1 299 -8 270 81 0 0 chr17 3505918 3505955 -85998598 + (TA)n Simple_repeat Simple_repeat 1 37 0 2289 95 0 22 chr17 3505959 3506140 -85998413 + AluSx SINE Alu 137 310 -2 2078 95 0 18 chr17 3507282 3507621 -85996932 + AluSg SINE Alu 1 334 0 1155 134 70 0 chr17 3507633 3507819 -85996734 + AluSx SINE Alu 1 199 -113 3096 144 8 16 chr17 3507940 3508454 -85996099 + L1PA16 LINE L1 5651 6160 -6 2224 107 0 0 chr17 3508732 3509031 -85995522 - AluSx SINE Alu -13 299 1 504 154 5 199 chr17 3509081 3509282 -85995271 + MER20 DNA MER1_type 1 162 -57 200 204 45 0 chr17 3509586 3509630 -85994923 - L2 LINE L2 -2 3311 3266 2280 77 7 7 chr17 3509989 3510288 -85994265 + AluSx SINE Alu 1 299 -13 623 136 164 9 chr17 3510399 3510509 -85994044 - FLAM_A SINE Alu -6 136 10 2352 68 0 3 chr17 3510859 3511153 -85993400 + AluSc SINE Alu 1 293 -16 2562 61 0 0 chr17 3511162 3511473 -85993080 + AluY SINE Alu 1 311 0 978 189 0 0 chr17 3511493 3511657 -85992896 + FRAM SINE Alu 2 165 -1 2216 91 3 7 chr17 3511945 3512241 -85992312 + AluSq SINE Alu 6 300 -13 2211 85 26 0 chr17 3513265 3513570 -85990983 + AluSp SINE Alu 1 313 0 928 93 0 0 chr17 3513572 3513701 -85990852 + AluY SINE Alu 175 303 -8 2145 109 3 0 chr17 3513779 3514073 -85990480 + AluSx SINE Alu 1 295 -17 2101 116 3 3 chr17 3514413 3514715 -85989838 - AluSp SINE Alu -11 302 1 214 296 167 9 chr17 3515347 3515455 -85989098 + MIR3 SINE MIR 48 172 -36 2045 122 3 3 chr17 3515754 3516062 -85988491 + AluSx SINE Alu 1 308 0 385 363 163 7 chr17 3516120 3516420 -85988133 - L3 LINE CR1 -39 1538 1192 1979 126 20 0 chr17 3516801 3517095 -85987458 + AluSp SINE Alu 1 300 -13 202 189 0 0 chr17 3517370 3517407 -85987146 + (CTGGGG)n Simple_repeat Simple_repeat 1 37 0 2123 119 0 22 chr17 3517790 3518108 -85986445 + AluSq SINE Alu 1 311 -2 530 202 0 29 chr17 3518249 3518353 -85986200 + AluJo SINE Alu 120 220 -92 2053 140 16 0 chr17 3518460 3518767 -85985786 - AluSx SINE Alu 0 312 1 192 291 0 0 chr17 3521933 3521988 -85982565 + MIR SINE MIR 92 146 -62 252 0 0 0 chr17 3522347 3522375 -85982178 + (TG)n Simple_repeat Simple_repeat 2 29 0 1214 109 0 0 chr17 3522375 3522540 -85982013 - AluSg/x SINE Alu -40 270 106 2424 62 7 10 chr17 3523075 3523384 -85981169 + AluSq SINE Alu 3 310 -3 246 32 0 0 chr17 3523384 3523415 -85981138 + (CAG)n Simple_repeat Simple_repeat 2 32 0 237 143 24 0 chr17 3523578 3523620 -85980933 - MER57A LTR ERV1 -66 337 295 658 243 106 23 chr17 3524394 3524612 -85979941 - MIR SINE MIR -19 243 8 234 0 0 0 chr17 3525525 3525551 -85979002 + (TCCA)n Simple_repeat Simple_repeat 1 26 0 584 265 82 0 chr17 3525908 3526078 -85978475 - MIR SINE MIR -22 240 57 377 172 98 163 chr17 3526833 3526897 -85977656 - MER105 DNA DNA -1 203 136 2246 109 0 0 chr17 3526897 3527201 -85977352 - AluSg SINE Alu -6 304 1 377 172 98 163 chr17 3527201 3527351 -85977202 - MER105 DNA DNA -68 136 3 192 345 0 0 chr17 3527640 3527695 -85976858 - MIR SINE MIR -109 153 99 2304 89 0 3 chr17 3527793 3528096 -85976457 - AluSx SINE Alu -10 302 1 2223 84 3 3 chr17 3528186 3528473 -85976080 + AluSq SINE Alu 1 287 -26 22 0 0 0 chr17 3528473 3528495 -85976058 + AT_rich Low_complexity Low_complexity 1 22 0 3148 134 23 44 chr17 3528495 3528849 -85975704 - L1MB3 LINE L1 -7 6176 5837 2038 134 27 0 chr17 3528849 3529148 -85975405 - AluSg SINE Alu -3 307 1 3148 134 23 44 chr17 3529148 3529366 -85975187 - L1MB3 LINE L1 -346 5837 5616 2038 117 0 3 chr17 3529535 3529845 -85974708 + AluSx SINE Alu 1 309 0 1379 177 42 28 chr17 3530835 3531123 -85973430 - AluJo SINE Alu -20 292 1 546 275 35 18 chr17 3531230 3531401 -85973152 - MIR SINE MIR -10 252 79 2347 63 6 19 chr17 3532069 3532386 -85972167 + AluSp SINE Alu 1 313 0 204 346 122 39 chr17 3532633 3532838 -85971715 + MIR SINE MIR 7 228 -34 191 322 132 25 chr17 3533353 3533474 -85971079 - L2 LINE L2 -260 3053 2920 2411 82 0 19 chr17 3533545 3533863 -85970690 + AluSx SINE Alu 1 312 0 503 294 69 20 chr17 3534332 3534455 -85970098 + MIR SINE MIR 49 187 -75 1984 141 0 3 chr17 3534455 3534752 -85969801 + AluSx SINE Alu 1 296 -16 503 294 69 20 chr17 3534752 3534832 -85969721 + MIR SINE MIR 187 262 0 866 255 30 64 chr17 3535117 3535177 -85969376 - MLT1I LTR MaLR -15 394 334 234 0 0 0 chr17 3535177 3535203 -85969350 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2028 97 0 11 chr17 3535206 3535485 -85969068 - AluSx SINE Alu -31 281 6 866 255 30 64 chr17 3535485 3535718 -85968835 - MLT1I LTR MaLR -77 332 107 2163 103 14 0 chr17 3536294 3536586 -85967967 + AluSx SINE Alu 1 296 -16 2392 183 106 111 chr17 3536588 3536767 -85967786 - MER44D DNA MER2_type -1882 605 427 2243 111 0 0 chr17 3536767 3537065 -85967488 - AluSx SINE Alu -14 298 1 2392 183 106 111 chr17 3537065 3537161 -85967392 - MER44D DNA MER2_type -2060 427 332 2114 127 13 0 chr17 3537161 3537468 -85967085 + AluSx SINE Alu 1 311 -1 2392 183 106 111 chr17 3537468 3537928 -85966625 - MER44D DNA MER2_type -2155 332 1 2126 103 21 0 chr17 3538124 3538415 -85966138 - AluSx SINE Alu -15 297 1 252 0 0 0 chr17 3538552 3538580 -85965973 + (GA)n Simple_repeat Simple_repeat 1 28 0 2338 89 0 0 chr17 3540516 3540819 -85963734 + AluSq SINE Alu 1 303 -10 1955 138 20 13 chr17 3541028 3541333 -85963220 - AluSx SINE Alu -5 307 1 2081 128 3 0 chr17 3541374 3541672 -85962881 + AluSx SINE Alu 1 299 -13 416 302 16 1 chr17 3541780 3541913 -85962640 - MER5B DNA MER1_type -40 149 1 253 316 158 38 chr17 3541939 3541981 -85962572 - MER5A DNA MER1_type -1 188 152 2383 74 0 0 chr17 3541981 3542278 -85962275 - AluSg SINE Alu -13 297 1 253 316 158 38 chr17 3542278 3542393 -85962160 - MER5A DNA MER1_type -37 152 12 566 236 52 40 chr17 3542413 3542587 -85961966 + MER5B DNA MER1_type 1 176 -2 1944 96 0 0 chr17 3542648 3542897 -85961656 - AluSx SINE Alu -63 249 1 848 158 0 15 chr17 3542954 3543087 -85961466 - FLAM_A SINE Alu -2 131 1 243 310 100 0 chr17 3543343 3543443 -85961110 - MIR SINE MIR -73 135 26 2267 70 0 3 chr17 3543471 3543783 -85960770 + AluY SINE Alu 1 311 0 2433 83 0 0 chr17 3543794 3544106 -85960447 + AluSx SINE Alu 1 312 0 2285 97 0 0 chr17 3545080 3545379 -85959174 - AluSg1 SINE Alu -10 299 1 1511 196 72 19 chr17 3545379 3545860 -85958693 + MLT1F LTR MaLR 35 542 0 2116 117 3 3 chr17 3545955 3546264 -85958289 - AluSg SINE Alu -1 309 1 1096 82 0 0 chr17 3546264 3546399 -85958154 - AluSq/x SINE Alu -178 135 1 358 223 71 9 chr17 3546550 3546662 -85957891 + MER57-int LTR ERV1 127 245 -7292 516 86 26 192 chr17 3547051 3547202 -85957351 + MER57-int LTR ERV1 1177 1302 -3569 367 228 70 70 chr17 3547202 3547329 -85957224 + MER93b LTR ERV1 199 328 -45 2198 109 0 3 chr17 3547329 3547632 -85956921 - AluSg1 SINE Alu -7 302 1 367 228 70 70 chr17 3547632 3547662 -85956891 + MER93b LTR ERV1 327 356 -17 1230 156 7 48 chr17 3547692 3547727 -85956826 - L1M4 LINE L1 -391 5793 5758 2338 82 0 3 chr17 3547727 3548021 -85956532 + AluSc SINE Alu 1 293 -16 1230 156 7 48 chr17 3548021 3548254 -85956299 - L1M4 LINE L1 -426 5758 5536 2168 101 0 3 chr17 3548682 3548978 -85955575 + AluSc SINE Alu 1 295 -14 1179 181 23 30 chr17 3549160 3549426 -85955127 + MER58B DNA MER1_type 78 341 0 2338 73 0 20 chr17 3549492 3549795 -85954758 - AluY SINE Alu -14 297 1 2331 68 3 0 chr17 3549796 3550088 -85954465 - AluSg1 SINE Alu -16 293 1 773 163 6 17 chr17 3550702 3550874 -85953679 + CT-rich Low_complexity Low_complexity 2 171 0 2302 106 0 0 chr17 3550874 3551186 -85953367 - AluSx SINE Alu 0 312 1 1109 159 17 0 chr17 3551188 3551364 -85953189 - AluJb SINE Alu -16 296 118 2446 70 0 3 chr17 3551930 3552242 -85952311 - AluSx SINE Alu -1 311 1 221 270 0 40 chr17 3553028 3553102 -85951451 + MIR SINE MIR 85 155 -107 256 315 9 28 chr17 3553596 3553704 -85950849 + MIR SINE MIR 31 136 -126 1953 133 0 3 chr17 3553877 3554192 -85950361 - AluSx SINE Alu 0 314 1 2193 245 45 13 chr17 3554462 3555000 -85949553 + MLT1H1 LTR MaLR 1 555 0 2287 98 0 0 chr17 3555008 3555314 -85949239 + AluSx SINE Alu 1 306 -6 541 298 55 36 chr17 3555317 3555646 -85948907 - HAL1 LINE L1 -963 1544 1210 2208 82 0 23 chr17 3555674 3555977 -85948576 + AluY SINE Alu 4 299 -12 1084 140 0 28 chr17 3555977 3556155 -85948398 + AluSq SINE Alu 135 307 -6 509 283 69 24 chr17 3556157 3556485 -85948068 - L1M4 LINE L1 -656 5522 5182 263 206 27 0 chr17 3557470 3557543 -85947010 + L1MC5 LINE L1 7832 7906 -55 2385 84 0 0 chr17 3557558 3557856 -85946697 - AluSg SINE Alu -12 298 1 1830 166 0 13 chr17 3557880 3558188 -85946365 - AluJo SINE Alu -8 304 1 227 324 152 0 chr17 3558200 3558305 -85946248 - L3 LINE CR1 -118 1459 1339 465 332 76 5 chr17 3558339 3558550 -85946003 + MIR SINE MIR 18 243 -19 2311 93 10 0 chr17 3558684 3558985 -85945568 + AluSq SINE Alu 1 304 -9 2169 85 0 20 chr17 3559811 3560106 -85944447 + AluSx SINE Alu 1 289 -23 850 189 148 71 chr17 3560628 3560751 -85943802 + MER33 DNA MER1_type 4 116 -2469 2306 103 3 0 chr17 3560751 3561062 -85943491 - AluSx SINE Alu 0 312 1 850 189 148 71 chr17 3561062 3561205 -85943348 + MER33 DNA MER1_type 116 298 -2287 2246 79 7 0 chr17 3561205 3561495 -85943058 - AluSc SINE Alu -17 292 1 850 189 148 71 chr17 3561495 3561524 -85943029 + MER33 DNA MER1_type 298 323 -1 504 204 11 0 chr17 3561542 3561635 -85942918 + AluJ/FLAM SINE Alu 1 94 -218 258 195 0 91 chr17 3561966 3562043 -85942510 - MIR3 SINE MIR -38 170 101 2394 78 0 7 chr17 3562212 3562520 -85942033 - AluSx SINE Alu -6 306 1 1112 182 47 23 chr17 3562538 3562752 -85941801 + MER20 DNA MER1_type 1 219 0 5228 21 0 0 chr17 3562946 3563520 -85941033 + SVA Other Other 809 1382 -4 2196 111 0 7 chr17 3563528 3563835 -85940718 + AluSx SINE Alu 2 306 -6 2011 116 0 0 chr17 3564128 3564403 -85940150 + AluSx SINE Alu 1 275 -37 739 47 0 19 chr17 3564414 3564520 -85940033 + (GGAA)n Simple_repeat Simple_repeat 4 107 0 2307 33 0 0 chr17 3564520 3564793 -85939760 - AluY SINE Alu -38 273 1 299 171 198 36 chr17 3566608 3566719 -85937834 - MER106A DNA MER1_type -56 180 52 2369 60 0 10 chr17 3566723 3567024 -85937529 - AluSx SINE Alu -14 298 1 2262 104 0 0 chr17 3567484 3567782 -85936771 - AluSq SINE Alu -15 298 1 2211 102 0 0 chr17 3568633 3568927 -85935626 + AluSx SINE Alu 4 297 -15 22 56 0 0 chr17 3568927 3568963 -85935590 + AT_rich Low_complexity Low_complexity 1 36 0 1767 164 0 23 chr17 3569867 3570171 -85934382 + AluJo SINE Alu 6 302 -10 243 324 29 19 chr17 3570408 3570513 -85934040 + MARNA DNA Mariner 62 167 -419 2287 100 0 3 chr17 3570619 3570929 -85933624 - AluSg SINE Alu -1 309 1 630 174 0 0 chr17 3571280 3571418 -85933135 + (TG)n Simple_repeat Simple_repeat 1 138 0 307 283 19 9 chr17 3571486 3571592 -85932961 - MIR SINE MIR -43 165 59 2243 98 3 3 chr17 3571658 3571963 -85932590 + AluSx SINE Alu 1 305 -7 497 264 71 13 chr17 3572130 3572285 -85932268 + MIR SINE MIR 2 165 -97 2317 81 0 0 chr17 3572285 3572581 -85931972 + AluY SINE Alu 1 296 -15 1172 170 0 77 chr17 3572699 3572827 -85931726 + AluJb SINE Alu 1 101 -211 2070 104 14 7 chr17 3572827 3573115 -85931438 - AluSx SINE Alu -22 290 1 1172 170 0 77 chr17 3573115 3573245 -85931308 + AluJb SINE Alu 101 239 -73 714 258 57 0 chr17 3573386 3573580 -85930973 - MIR SINE MIR 0 262 58 2289 103 0 0 chr17 3573701 3574012 -85930541 - AluY SINE Alu 0 311 1 917 135 0 0 chr17 3574016 3574149 -85930404 - AluSq/x SINE Alu -179 133 1 2228 119 0 0 chr17 3574826 3575128 -85929425 + AluSx SINE Alu 1 302 -10 2099 115 10 7 chr17 3575531 3575835 -85928718 - AluSc SINE Alu -4 305 1 790 176 0 47 chr17 3575837 3575985 -85928568 - FLAM_C SINE Alu -2 141 1 2131 109 0 10 chr17 3578418 3578720 -85925833 + AluSx SINE Alu 3 301 -11 263 284 226 0 chr17 3578784 3578886 -85925667 + MER5A DNA MER1_type 59 183 -6 912 131 25 175 chr17 3579107 3579227 -85925326 + L1MA9 LINE L1 6036 6125 -187 229 175 0 0 chr17 3579227 3579267 -85925286 + Alu SINE Alu 135 174 -134 912 131 25 175 chr17 3579267 3579427 -85925126 + L1MA9 LINE L1 6125 6307 -5 971 211 11 0 chr17 3579571 3579756 -85924797 + AluJo SINE Alu 121 307 -5 2221 110 3 0 chr17 3580042 3580351 -85924202 - AluSx SINE Alu -2 310 1 2065 107 14 0 chr17 3580360 3580640 -85923913 - AluSx SINE Alu -28 284 1 399 287 100 10 chr17 3580687 3580923 -85923630 + L1ME3A LINE L1 5907 6162 0 2377 87 0 6 chr17 3580939 3581251 -85923302 + AluSx SINE Alu 1 310 -2 371 301 32 75 chr17 3581432 3581563 -85922990 + MIR SINE MIR 84 206 -56 2147 125 0 0 chr17 3581563 3581859 -85922694 + AluSq SINE Alu 1 296 -17 371 301 32 75 chr17 3581859 3581913 -85922640 + MIR SINE MIR 206 261 -1 847 82 16 16 chr17 3582249 3582371 -85922182 + FRAM SINE Alu 18 139 -37 2066 105 3 3 chr17 3582383 3582669 -85921884 + AluSx SINE Alu 1 286 -26 2231 108 0 0 chr17 3582849 3583145 -85921408 + AluSp SINE Alu 3 298 -15 476 286 71 18 chr17 3583401 3583569 -85920984 - MIR SINE MIR -23 239 63 2306 87 0 22 chr17 3583646 3583958 -85920595 + AluSx SINE Alu 1 305 -7 791 105 0 0 chr17 3583968 3584073 -85920480 + FLAM_C SINE Alu 1 105 -38 364 267 25 25 chr17 3585336 3585497 -85919056 + C-rich Low_complexity Low_complexity 5 165 0 310 298 17 44 chr17 3585519 3585700 -85918853 + C-rich Low_complexity Low_complexity 5 180 0 220 271 17 0 chr17 3586333 3586392 -85918161 + GA-rich Low_complexity Low_complexity 4 63 0 308 296 65 0 chr17 3588601 3588709 -85915844 - MIR SINE MIR -113 149 35 2264 101 0 0 chr17 3591286 3591583 -85912970 + AluSq SINE Alu 1 297 -16 240 35 0 0 chr17 3595001 3595030 -85909523 + (A)n Simple_repeat Simple_repeat 1 29 0 2371 67 10 0 chr17 3596322 3596622 -85907931 + AluSx SINE Alu 1 303 -9 640 257 48 62 chr17 3599113 3599145 -85905408 - MIR SINE MIR 0 262 231 2242 97 0 19 chr17 3599145 3599455 -85905098 + AluSx SINE Alu 1 304 -8 640 257 48 62 chr17 3599455 3599651 -85904902 - MIR SINE MIR -31 231 38 2090 99 7 20 chr17 3599844 3600146 -85904407 + AluSx SINE Alu 1 298 -14 2349 73 3 0 chr17 3600259 3600559 -85903994 + AluSp SINE Alu 1 301 -12 1482 157 52 28 chr17 3600610 3600896 -85903657 + AluJb SINE Alu 3 295 -17 272 343 72 12 chr17 3601034 3601200 -85903353 - L2 LINE L2 -214 3058 2883 502 155 10 62 chr17 3601237 3601334 -85903219 + FRAM SINE Alu 4 95 -81 298 247 62 0 chr17 3601794 3601875 -85902678 - L1ME LINE L1 -343 5778 5693 2137 110 0 25 chr17 3602159 3602477 -85902076 + AluSg SINE Alu 1 310 0 234 313 115 0 chr17 3603136 3603232 -85901321 - MIR3 SINE MIR -11 197 91 2295 50 9 40 chr17 3603287 3603608 -85900945 + AluY SINE Alu 1 311 0 675 335 80 15 chr17 3603948 3604285 -85900268 + L2 LINE L2 2914 3272 0 2141 95 3 3 chr17 3604304 3604600 -85899953 - AluSx SINE Alu -16 296 1 2216 88 7 3 chr17 3604815 3605111 -85899442 - AluSg SINE Alu -13 297 1 240 237 246 26 chr17 3605893 3606007 -85898546 - MER5A DNA MER1_type 0 189 51 2224 102 0 0 chr17 3606040 3606343 -85898210 + AluSx SINE Alu 1 303 -9 735 266 58 0 chr17 3608391 3608579 -85895974 + MIR SINE MIR 43 241 -21 268 300 14 0 chr17 3610864 3610934 -85893619 - MIR3 SINE MIR -51 157 87 335 283 52 38 chr17 3611296 3611490 -85893063 - MIR SINE MIR -51 211 18 217 257 206 37 chr17 3611517 3611653 -85892900 - L2 LINE L2 -2 3270 3112 2344 89 0 3 chr17 3612018 3612331 -85892222 + AluSq SINE Alu 2 313 0 2331 76 10 0 chr17 3612725 3613028 -85891525 + AluSx SINE Alu 1 306 -6 442 191 12 12 chr17 3613512 3613596 -85890957 + MER20 DNA MER1_type 64 147 -72 1780 147 7 3 chr17 3613596 3613882 -85890671 + AluJo SINE Alu 1 287 -25 2217 98 3 3 chr17 3614101 3614407 -85890146 - AluSp SINE Alu -7 306 1 657 209 0 0 chr17 3617656 3617809 -85886744 + (CA)n Simple_repeat Simple_repeat 1 153 0 1922 71 61 46 chr17 3619864 3620167 -85884386 + AluY SINE Alu 1 307 0 414 130 0 0 chr17 3620308 3620377 -85884176 + L1MC4 LINE L1 7475 7543 -499 1674 162 47 0 chr17 3620384 3620681 -85883872 + AluJb SINE Alu 1 311 -1 1824 179 12 66 chr17 3620700 3621279 -85883274 + L1MB5 LINE L1 5099 5659 -525 2089 113 0 19 chr17 3621279 3621598 -85882955 + AluSq SINE Alu 1 313 0 1824 179 12 66 chr17 3621598 3621649 -85882904 + L1MB5 LINE L1 5659 5711 -473 307 109 31 47 chr17 3621650 3621714 -85882839 - AluSq SINE Alu -1 301 239 1128 144 0 28 chr17 3621714 3621894 -85882659 - AluSq SINE Alu -137 176 2 1139 186 4 30 chr17 3621897 3622133 -85882420 + L1MB5 LINE L1 5730 5959 -215 1463 81 5 10 chr17 3622133 3622331 -85882222 - AluSx SINE Alu -115 197 1 605 213 20 25 chr17 3622373 3622542 -85882011 + MLT1B LTR MaLR 166 342 -36 22 35 0 0 chr17 3623974 3624003 -85880550 + GC_rich Low_complexity Low_complexity 1 29 0 219 69 0 0 chr17 3624086 3624115 -85880438 + (TCC)n Simple_repeat Simple_repeat 1 29 0 2220 60 50 10 chr17 3624265 3624565 -85879988 - AluSx SINE Alu 0 312 1 325 330 54 0 chr17 3625419 3625531 -85879022 - MER5A DNA MER1_type -9 180 63 433 333 128 27 chr17 3625557 3625854 -85878699 + L2 LINE L2 2986 3312 -1 1254 179 0 48 chr17 3626749 3626874 -85877679 + AluJo SINE Alu 1 130 -182 480 18 0 0 chr17 3626874 3626931 -85877622 + (CA)n Simple_repeat Simple_repeat 2 58 0 1254 179 0 48 chr17 3626931 3626949 -85877604 + AluJo SINE Alu 130 147 -165 1784 139 17 10 chr17 3626949 3627237 -85877316 + AluJo SINE Alu 1 290 -22 1254 179 0 48 chr17 3627237 3627343 -85877210 + AluJo SINE Alu 147 239 -73 2005 119 0 0 chr17 3627361 3627785 -85876768 + AluSg SINE Alu 2 425 0 288 263 105 26 chr17 3627791 3627905 -85876648 - MER112 DNA MER1_type -136 124 2 2245 91 0 0 chr17 3628056 3628352 -85876201 + AluSg SINE Alu 1 296 -14 1651 181 24 0 chr17 3628424 3628717 -85875836 + MSTB LTR MaLR 1 300 -126 1339 101 105 5 chr17 3628941 3629150 -85875403 - MER30 DNA MER1_type 0 230 1 2257 96 3 6 chr17 3629215 3629527 -85875026 + AluSp SINE Alu 3 313 0 1871 96 0 76 chr17 3629556 3629857 -85874696 - AluSx SINE Alu -4 308 31 4409 88 189 23 chr17 3629857 3630565 -85873988 + LTR12 LTR ERV1 1 826 0 1517 165 9 71 chr17 3630990 3631312 -85873241 + AluJo SINE Alu 1 302 -10 2377 76 0 13 chr17 3631586 3631903 -85872650 + AluSp SINE Alu 1 313 0 2166 109 3 3 chr17 3632496 3632800 -85871753 + AluSp SINE Alu 1 304 -9 1666 165 0 26 chr17 3633572 3633732 -85870821 - AluJb SINE Alu -17 295 145 2107 110 3 3 chr17 3633732 3634024 -85870529 - AluSc SINE Alu -17 292 1 1666 165 0 26 chr17 3634024 3634166 -85870387 - AluJb SINE Alu -167 145 1 1774 85 0 0 chr17 3634442 3634677 -85869876 - AluSc SINE Alu -70 239 5 692 236 109 0 chr17 3634677 3634906 -85869647 + Charlie4a DNA MER1_type 159 412 -96 2518 56 0 0 chr17 3635548 3635850 -85868703 + AluY SINE Alu 1 302 -9 228 296 0 0 chr17 3636361 3636415 -85868138 + L1ME LINE L1 5529 5582 -539 1990 100 0 0 chr17 3636716 3636987 -85867566 - AluSx SINE Alu -8 304 34 546 175 133 33 chr17 3637271 3637391 -85867162 + FLAM_A SINE Alu 1 132 -1 2052 85 14 11 chr17 3637398 3637716 -85866837 + AluSg SINE Alu 1 319 0 2068 123 0 0 chr17 3637913 3638206 -85866347 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr17 3638206 3638228 -85866325 + AT_rich Low_complexity Low_complexity 1 22 0 2028 137 7 0 chr17 3638414 3638720 -85865833 + AluSx SINE Alu 1 308 -4 1082 104 0 31 chr17 3639136 3639158 -85865395 - AluSg/x SINE Alu -8 304 283 2266 83 6 6 chr17 3639158 3639470 -85865083 - AluSx SINE Alu 0 312 1 201 39 0 0 chr17 3639473 3639499 -85865054 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1082 104 0 31 chr17 3639499 3639635 -85864918 - AluSg/x SINE Alu -31 281 147 655 328 94 55 chr17 3640318 3640443 -85864110 + L1M4 LINE L1 4156 4275 -1871 2167 71 14 10 chr17 3640443 3640737 -85863816 + AluSx SINE Alu 1 295 -17 655 328 94 55 chr17 3640737 3640864 -85863689 + L1M4 LINE L1 4275 4396 -1750 1535 171 34 13 chr17 3640864 3641162 -85863391 + AluJo SINE Alu 1 304 -8 655 328 94 55 chr17 3641162 3641252 -85863301 + L1M4 LINE L1 4396 4481 -1665 2286 103 3 0 chr17 3641252 3641563 -85862990 + AluSp SINE Alu 2 313 0 655 328 94 55 chr17 3641563 3641721 -85862832 + L1M4 LINE L1 4481 4631 -1515 2308 72 0 0 chr17 3641721 3642012 -85862541 - AluY SINE Alu -20 291 1 2379 77 0 0 chr17 3642014 3642311 -85862242 - AluSc SINE Alu -12 297 1 655 328 94 55 chr17 3642311 3642386 -85862167 + L1M4 LINE L1 4631 4760 -1386 1353 178 15 37 chr17 3643370 3643640 -85860913 + AluJo SINE Alu 15 278 -34 2091 85 0 51 chr17 3643660 3643976 -85860577 + AluSg SINE Alu 1 300 -10 268 320 13 0 chr17 3645424 3645499 -85859054 + L3 LINE CR1 1481 1556 -21 474 310 58 65 chr17 3645931 3646192 -85858361 + MLT1L LTR MaLR 136 394 -221 2134 117 0 13 chr17 3646730 3647046 -85857507 + AluSx SINE Alu 1 312 0 1949 116 7 3 chr17 3647496 3647807 -85856746 - AluSx SINE Alu 0 312 1 2204 103 0 3 chr17 3648361 3648662 -85855891 - AluSx SINE Alu -12 300 1 1972 145 0 0 chr17 3648718 3649008 -85855545 - AluJb SINE Alu -22 290 1 2005 135 0 19 chr17 3649040 3649351 -85855202 - AluJo SINE Alu -3 309 5 225 265 0 0 chr17 3649491 3649540 -85855013 - L2 LINE L2 -243 3070 3022 1248 146 5 36 chr17 3649541 3649675 -85854878 + AluSx SINE Alu 1 129 -183 2148 62 47 0 chr17 3649675 3649950 -85854603 + AluSp SINE Alu 1 287 -26 190 0 0 0 chr17 3649950 3649971 -85854582 + (GAAAA)n Simple_repeat Simple_repeat 3 150 0 2453 65 3 0 chr17 3649977 3650285 -85854268 + AluSx SINE Alu 1 309 -3 1063 311 36 60 chr17 3650303 3651055 -85853498 - L2 LINE L2 -312 3001 2266 861 102 0 8 chr17 3654324 3654442 -85850111 + FLAM_A SINE Alu 1 117 -16 2150 90 0 29 chr17 3654496 3654807 -85849746 - AluSg SINE Alu -8 302 1 2472 65 0 0 chr17 3655168 3655476 -85849077 - AluY SINE Alu -3 308 1 816 226 6 0 chr17 3655982 3656141 -85848412 - AluJb SINE Alu -13 299 140 2350 94 3 0 chr17 3656146 3656454 -85848099 - AluSx SINE Alu -3 309 1 2202 98 0 25 chr17 3656531 3656847 -85847706 + AluSx SINE Alu 1 308 -4 2087 112 3 0 chr17 3657390 3657676 -85846877 - AluSx SINE Alu -25 287 1 1451 99 33 5 chr17 3657677 3657888 -85846665 - L1PA10 LINE L1 -13 6155 5939 2190 75 4 0 chr17 3657955 3658286 -85846267 + AluSg1 SINE Alu 1 332 0 791 187 79 30 chr17 3658361 3658564 -85845989 - MER20 DNA MER1_type -1 218 6 2511 77 0 0 chr17 3659144 3659454 -85845099 - AluSx SINE Alu -2 310 1 2219 108 0 10 chr17 3659603 3659909 -85844644 + AluSx SINE Alu 1 303 -9 286 319 88 96 chr17 3660352 3660612 -85843941 - L2 LINE L2 -8 3264 3007 520 187 18 160 chr17 3660676 3660785 -85843768 - MER105 DNA DNA -13 191 68 2261 103 3 3 chr17 3660785 3661097 -85843456 - AluSq SINE Alu -1 312 1 520 187 18 160 chr17 3661097 3661128 -85843425 - MER105 DNA DNA -136 68 34 2135 193 159 48 chr17 3661128 3661227 -85843326 - LTR65 LTR ERV1 0 669 582 2190 86 4 0 chr17 3661227 3661529 -85843024 - AluSx SINE Alu 0 307 5 2135 193 159 48 chr17 3661529 3661878 -85842675 - LTR65 LTR ERV1 -87 582 134 2433 59 0 10 chr17 3661878 3662185 -85842368 - AluY SINE Alu -7 304 1 2135 193 159 48 chr17 3662185 3662336 -85842217 - LTR65 LTR ERV1 -535 134 1 520 187 18 160 chr17 3662336 3662413 -85842140 - MER105 DNA DNA -170 34 4 1529 123 11 84 chr17 3662835 3662975 -85841578 - AluJb SINE Alu -49 263 153 2383 76 3 0 chr17 3662975 3663279 -85841274 - AluSp SINE Alu -8 305 1 1529 123 11 84 chr17 3663279 3663422 -85841131 - AluJb SINE Alu -159 153 1 469 248 142 0 chr17 3663554 3663695 -85840858 - MIR SINE MIR -1 261 101 2043 101 4 0 chr17 3663695 3663973 -85840580 + AluSx SINE Alu 22 300 -12 1067 127 7 0 chr17 3663973 3664146 -85840407 + AluSq SINE Alu 134 307 0 274 333 51 0 chr17 3664487 3664604 -85839949 + L3 LINE CR1 1308 1430 -147 401 21 0 0 chr17 3664605 3664653 -85839900 - AluY SINE Alu -265 48 1 254 309 107 98 chr17 3664715 3664824 -85839729 - L2 LINE L2 -636 2678 2572 2212 117 3 0 chr17 3664824 3665133 -85839420 + AluSx SINE Alu 1 310 -2 254 309 107 98 chr17 3665133 3665443 -85839110 - L2 LINE L2 -742 2572 2255 2120 84 0 0 chr17 3666006 3666281 -85838272 - AluSg SINE Alu -35 275 1 864 246 72 0 chr17 3666354 3666549 -85838004 + MER3 DNA MER1_type 1 209 0 726 277 179 14 chr17 3666704 3667244 -85837309 + L2 LINE L2 2667 3313 0 2191 117 3 0 chr17 3668179 3668488 -85836065 - AluSx SINE Alu -2 310 1 2506 29 3 32 chr17 3668883 3669198 -85835355 - AluY SINE Alu -5 306 1 2108 148 41 35 chr17 3669501 3669606 -85834947 + L1MC4 LINE L1 7378 7481 -561 2266 97 3 0 chr17 3669606 3669904 -85834649 + AluSq SINE Alu 1 299 -14 2108 148 41 35 chr17 3669904 3670259 -85834294 + L1MC4 LINE L1 7481 7841 -201 1252 121 0 0 chr17 3670267 3670440 -85834113 - AluSg/x SINE Alu -14 298 126 2116 109 0 34 chr17 3670440 3670762 -85833791 - AluSx SINE Alu -1 311 1 205 264 58 58 chr17 3671136 3671223 -85833330 + MIR3 SINE MIR 107 193 -15 2516 74 0 0 chr17 3671502 3671813 -85832740 - AluSx SINE Alu -1 311 1 810 222 0 30 chr17 3671815 3671982 -85832571 - FRAM SINE Alu 0 166 5 2211 103 6 13 chr17 3672248 3672559 -85831994 - AluSx SINE Alu -3 309 1 2224 102 0 0 chr17 3673149 3673452 -85831101 - AluSq SINE Alu -10 303 1 239 330 52 0 chr17 3674094 3674209 -85830344 - MIR3 SINE MIR -7 201 81 2289 83 6 10 chr17 3674256 3674568 -85829985 - AluY SINE Alu 0 311 1 1150 38 0 0 chr17 3674570 3674701 -85829852 - AluY SINE Alu -180 131 1 2239 70 27 10 chr17 3675120 3675419 -85829134 - AluY SINE Alu -7 304 1 1079 277 177 43 chr17 3675932 3676115 -85828438 - L2 LINE L2 -1 3312 3155 2149 94 3 3 chr17 3676115 3676414 -85828139 + AluSx SINE Alu 1 299 -13 1079 277 177 43 chr17 3676414 3677063 -85827490 - L2 LINE L2 -158 3155 2311 2427 50 7 0 chr17 3677063 3677361 -85827192 - AluY SINE Alu -10 301 2 1079 277 177 43 chr17 3677361 3677520 -85827033 - L2 LINE L2 -1002 2311 2175 2242 112 0 0 chr17 3677546 3677850 -85826703 + AluSg SINE Alu 1 304 -6 572 307 146 0 chr17 3677869 3678061 -85826492 - MIR SINE MIR -35 227 8 420 278 26 57 chr17 3680054 3680233 -85824320 + MIR SINE MIR 14 192 -61 2093 126 17 0 chr17 3680284 3680578 -85823975 + AluSx SINE Alu 1 299 -13 2167 111 7 0 chr17 3680579 3680885 -85823668 + AluSp SINE Alu 2 309 -4 219 231 102 37 chr17 3681466 3681574 -85822979 + MIR3 SINE MIR 40 154 -54 1773 117 53 0 chr17 3682075 3682363 -85822190 - AluSx SINE Alu 0 307 6 303 187 0 133 chr17 3682660 3682863 -85821690 + C-rich Low_complexity Low_complexity 4 179 0 569 113 0 0 chr17 3683413 3683493 -85821060 + AluSg/x SINE Alu 219 298 -14 274 221 253 0 chr17 3683825 3683920 -85820633 + MIR SINE MIR 21 139 -69 187 286 143 0 chr17 3683901 3683978 -85820575 + L2 LINE L2 3137 3224 -48 * 258 359 18 41 chr17 3683980 3684035 -85820518 - MIR3 SINE MIR -2 206 151 1783 152 13 32 chr17 3684035 3684212 -85820341 - AluSx SINE Alu -2 310 140 2132 118 0 10 chr17 3684212 3684516 -85820037 - AluSx SINE Alu -11 301 1 1783 152 13 32 chr17 3684516 3684654 -85819899 - AluSx SINE Alu -172 140 1 258 359 18 41 chr17 3684654 3684768 -85819785 - MIR3 SINE MIR -57 151 41 325 230 62 120 chr17 3684982 3685291 -85819262 + L2 LINE L2 2747 3052 -220 219 258 72 41 chr17 3685787 3685884 -85818669 - MIR SINE MIR -87 121 22 570 232 14 162 chr17 3685949 3686055 -85818498 - MIR SINE MIR 0 262 142 1108 148 0 0 chr17 3686055 3686217 -85818336 - FRAM SINE Alu 0 166 5 570 232 14 162 chr17 3686217 3686249 -85818304 - MIR SINE MIR -120 142 107 2145 112 3 16 chr17 3686249 3686563 -85817990 - AluSx SINE Alu -2 310 1 570 232 14 162 chr17 3686563 3686655 -85817898 - MIR SINE MIR -155 107 78 2473 62 3 0 chr17 3686655 3686959 -85817594 + AluY SINE Alu 1 305 -6 570 232 14 162 chr17 3686959 3687010 -85817543 - MIR SINE MIR -184 78 21 507 254 125 19 chr17 3687599 3687954 -85816599 + MLT1H1 LTR MaLR 86 547 -8 2200 117 3 3 chr17 3688241 3688550 -85816003 - AluSx SINE Alu -3 309 1 274 208 20 89 chr17 3688613 3688714 -85815839 + MIR3 SINE MIR 81 174 -34 336 111 0 0 chr17 3688828 3688882 -85815671 + (TCC)n Simple_repeat Simple_repeat 1 54 0 2405 68 3 10 chr17 3690400 3690708 -85813845 - AluY SINE Alu -4 307 2 2027 134 7 0 chr17 3690712 3691003 -85813550 - AluSx SINE Alu -19 293 1 288 0 0 0 chr17 3691117 3691149 -85813404 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 239 310 0 0 chr17 3691155 3691213 -85813340 - L2 LINE L2 -19 3294 3237 2179 92 0 0 chr17 3692225 3692528 -85812025 + AluSx SINE Alu 1 303 0 208 281 24 85 chr17 3692659 3692741 -85811812 + L3 LINE CR1 1377 1453 -124 2571 43 0 0 chr17 3692878 3693181 -85811372 + AluY SINE Alu 1 303 -8 559 288 179 11 chr17 3693361 3693729 -85810824 + L2 LINE L2 1818 2247 -1067 1181 119 0 21 chr17 3693731 3693925 -85810628 + MLT1D LTR MaLR 1 190 -315 1113 45 0 0 chr17 3693934 3694088 -85810465 + GSAT Satellite centromeric 32 185 -32 * 1215 189 124 40 chr17 3694083 3694336 -85810217 + MLT1D LTR MaLR 154 384 -121 1912 107 0 21 chr17 3694336 3694616 -85809937 + AluSq SINE Alu 1 274 -39 410 0 0 20 chr17 3694620 3694671 -85809882 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1215 189 124 40 chr17 3694671 3694735 -85809818 + MLT1D LTR MaLR 386 503 -2 555 273 23 11 chr17 3694735 3694911 -85809642 + L2 LINE L2 2355 2532 -782 2268 104 0 3 chr17 3694911 3695220 -85809333 - AluSq SINE Alu -5 308 1 1050 96 0 0 chr17 3695220 3695355 -85809198 - AluSq/x SINE Alu -177 135 1 1297 183 48 8 chr17 3695451 3695702 -85808851 - AluJb SINE Alu -17 295 35 704 176 155 10 chr17 3695705 3695888 -85808665 + MLT1D LTR MaLR 245 436 -69 1735 154 0 8 chr17 3695956 3696222 -85808331 - AluJb SINE Alu -20 292 29 589 312 159 3 chr17 3696404 3696718 -85807835 + L2 LINE L2 2945 3307 -6 257 310 20 40 chr17 3697206 3697306 -85807247 - MER91C DNA MER1_type -3 137 40 2095 114 0 29 chr17 3697507 3697822 -85806731 - AluSx SINE Alu -6 306 1 2248 102 0 31 chr17 3697937 3698259 -85806294 - AluSx SINE Alu 0 312 1 737 289 120 25 chr17 3698955 3699356 -85805197 + L1ME3A LINE L1 5691 6129 -41 2336 77 13 10 chr17 3699356 3699666 -85804887 - AluSq SINE Alu -2 311 1 360 319 128 57 chr17 3699844 3700227 -85804326 + L2 LINE L2 2849 3258 -14 261 0 0 0 chr17 3700228 3700257 -85804296 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 2388 81 7 0 chr17 3700297 3700592 -85803961 - AluSx SINE Alu -14 298 2 3562 209 28 42 chr17 3700690 3701039 -85803514 - MER21B LTR ERV1 -49 814 462 2201 90 24 3 chr17 3701039 3701329 -85803224 + AluSg SINE Alu 1 296 -14 3562 209 28 42 chr17 3701329 3701792 -85802761 - MER21B LTR ERV1 -401 462 13 2285 103 0 25 chr17 3702324 3702644 -85801909 + AluSx SINE Alu 1 312 0 1597 151 6 71 chr17 3702790 3703101 -85801452 - AluJb SINE Alu -17 295 5 385 319 128 21 chr17 3703223 3703321 -85801232 - L1ME LINE L1 -360 5804 5718 2205 98 0 35 chr17 3703321 3703637 -85800916 - AluSx SINE Alu -6 306 2 385 319 128 21 chr17 3703637 3703865 -85800688 - L1ME LINE L1 -446 5718 5437 2604 63 0 0 chr17 3703923 3704225 -85800328 - AluSx SINE Alu -9 303 2 406 318 65 15 chr17 3704230 3704431 -85800122 - MIR SINE MIR -43 219 9 1532 151 12 15 chr17 3704469 3704728 -85799825 - AluJb SINE Alu -54 258 1 277 129 71 14 chr17 3704731 3704801 -85799752 + L1ME4a LINE L1 6047 6120 -1 2585 40 0 7 chr17 3704827 3705131 -85799422 - AluY SINE Alu -9 302 1 185 265 41 0 chr17 3705875 3705924 -85798629 + L2 LINE L2 3148 3198 -74 698 209 39 34 chr17 3705935 3706141 -85798412 + L1ME2 LINE L1 5648 5854 -310 2065 117 0 47 chr17 3706173 3706490 -85798063 + AluSx SINE Alu 1 302 -10 386 193 67 44 chr17 3706522 3706657 -85797896 - L1MC4 LINE L1 -933 7109 6972 544 346 29 8 chr17 3706660 3706903 -85797650 + L1MEc LINE L1 51 298 -6098 916 219 45 20 chr17 3706913 3707159 -85797394 + L1ME2 LINE L1 5903 6154 -10 427 220 47 127 chr17 3707176 3707232 -85797321 + L1MC5 LINE L1 7708 7767 -194 2120 116 0 28 chr17 3707232 3707551 -85797002 - AluSx SINE Alu -1 311 2 427 220 47 127 chr17 3707551 3707730 -85796823 + L1MC5 LINE L1 7767 7924 -37 227 322 44 22 chr17 3707745 3707835 -85796718 - L1MC/D LINE L1 -2219 5589 5498 2287 65 0 77 chr17 3707898 3708084 -85796469 - AluSp SINE Alu -14 299 147 2347 79 26 3 chr17 3708084 3708387 -85796166 - AluY SINE Alu -1 310 1 2287 65 0 77 chr17 3708387 3708524 -85796029 - AluSp SINE Alu -166 147 1 722 81 0 10 chr17 3708524 3708623 -85795930 - AluSp SINE Alu -178 135 38 1794 155 0 20 chr17 3708625 3708922 -85795631 - AluJb SINE Alu -9 303 13 1923 111 36 33 chr17 3709272 3709578 -85794975 - AluSx SINE Alu -1 311 5 2321 94 3 10 chr17 3710058 3710366 -85794187 - AluSx SINE Alu -6 306 1 363 293 8 0 chr17 3710729 3710862 -85793691 + L1M4 LINE L1 2419 2552 -3594 1312 130 0 0 chr17 3710900 3711085 -85793468 + AluSq SINE Alu 1 185 -128 1206 101 0 0 chr17 3711187 3711336 -85793217 - AluSg SINE Alu -161 149 1 1850 155 28 17 chr17 3711741 3712032 -85792521 + AluJb SINE Alu 5 298 -14 253 322 106 28 chr17 3712395 3712575 -85791978 + MIR SINE MIR 5 198 -64 316 322 93 57 chr17 3713402 3713703 -85790850 + HAL1b LINE L1 901 1212 -136 1860 169 0 32 chr17 3713762 3714076 -85790477 + AluJb SINE Alu 1 304 -8 359 257 112 14 chr17 3714114 3714328 -85790225 + L1M4 LINE L1 5140 5374 -772 1374 97 0 6 chr17 3714375 3714551 -85790002 + AluSq SINE Alu 3 177 -136 488 260 46 62 chr17 3714688 3714807 -85789746 - L1M4 LINE L1 -2687 3459 3340 2657 36 0 0 chr17 3714807 3715108 -85789445 - AluY SINE Alu -10 301 1 488 260 46 62 chr17 3715108 3715437 -85789116 - L1M4 LINE L1 -2806 3340 3007 803 39 10 0 chr17 3715437 3715540 -85789013 + (TTCC)n Simple_repeat Simple_repeat 1 104 0 1995 128 4 0 chr17 3715542 3715816 -85788737 - AluSx SINE Alu -37 275 1 1703 168 0 70 chr17 3715819 3716147 -85788406 - AluJb SINE Alu -1 311 7 488 260 46 62 chr17 3716147 3716313 -85788240 - L1M4 LINE L1 -3142 3004 2675 2508 69 0 0 chr17 3716314 3716605 -85787948 + AluSc SINE Alu 5 295 -14 2025 93 0 76 chr17 3716729 3717031 -85787522 - AluSx SINE Alu -3 309 31 4535 89 136 33 chr17 3717031 3717780 -85786773 + LTR12 LTR ERV1 1 826 0 1629 165 9 71 chr17 3718206 3718528 -85786025 + AluJo SINE Alu 1 302 -10 2463 80 0 13 chr17 3718802 3719115 -85785438 + AluSp SINE Alu 1 309 -4 2269 112 3 3 chr17 3719708 3720012 -85784541 + AluSp SINE Alu 1 304 -9 1793 165 0 26 chr17 3720784 3720944 -85783609 - AluJb SINE Alu -17 295 145 2223 113 3 3 chr17 3720944 3721236 -85783317 - AluSc SINE Alu -17 292 1 1793 165 0 26 chr17 3721236 3721378 -85783175 - AluJb SINE Alu -167 145 1 1878 85 0 0 chr17 3721654 3721889 -85782664 - AluSc SINE Alu -70 239 5 697 236 109 0 chr17 3721889 3722118 -85782435 + Charlie4a DNA MER1_type 159 412 -96 2683 43 0 0 chr17 3722760 3723059 -85781494 + AluY SINE Alu 1 299 -12 180 0 0 0 chr17 3723059 3723079 -85781474 + (TA)n Simple_repeat Simple_repeat 2 21 0 555 259 0 0 chr17 3724027 3724368 -85780185 + (CA)n Simple_repeat Simple_repeat 1 341 0 249 266 0 0 chr17 3724383 3724477 -85780076 + (CA)n Simple_repeat Simple_repeat 1 94 0 181 268 0 0 chr17 3724755 3724796 -85779757 + L2 LINE L2 3206 3246 -26 318 227 0 23 chr17 3725386 3725474 -85779079 - AluJ/FRAM SINE Alu 0 302 217 * 331 170 86 0 chr17 3725433 3725517 -85779036 + AluJ/FRAM SINE Alu 221 302 0 415 261 15 46 chr17 3725544 3725674 -85778879 + L1MC5 LINE L1 6995 7120 -841 280 109 18 18 chr17 3725686 3725741 -85778812 + (TCCC)n Simple_repeat Simple_repeat 4 58 0 2177 133 0 3 chr17 3725745 3726054 -85778499 - AluSx SINE Alu -4 308 1 273 260 75 48 chr17 3726101 3726247 -85778306 + L1MC4 LINE L1 7100 7249 -793 237 318 103 0 chr17 3726251 3726358 -85778195 + L1MC4 LINE L1 7323 7440 -602 281 286 26 0 chr17 3726363 3726440 -85778113 - MER5A DNA MER1_type -107 82 4 1972 116 3 27 chr17 3726482 3726773 -85777780 + AluSx SINE Alu 1 286 -26 192 40 0 0 chr17 3726773 3726798 -85777755 + (CA)n Simple_repeat Simple_repeat 2 26 0 287 279 79 92 chr17 3726891 3727143 -85777410 + L1MC5 LINE L1 7340 7594 -367 2583 50 0 3 chr17 3727143 3727442 -85777111 + AluY SINE Alu 1 298 -13 287 279 79 92 chr17 3727442 3727558 -85776995 + L1MC5 LINE L1 7594 7704 -257 2300 109 0 0 chr17 3727558 3727852 -85776701 - AluSx SINE Alu -18 294 1 287 279 79 92 chr17 3727852 3727926 -85776627 + L1MC5 LINE L1 7704 7777 -184 462 253 136 6 chr17 3727927 3728089 -85776464 - MER5A DNA MER1_type -3 186 4 2209 94 16 10 chr17 3728381 3728689 -85775864 - AluSx SINE Alu -2 310 1 2199 109 3 7 chr17 3729320 3729623 -85774930 - AluSg SINE Alu -8 302 1 680 172 0 0 chr17 3729623 3729739 -85774814 - AluSg/x SINE Alu -14 296 181 1283 117 11 0 chr17 3729939 3730118 -85774435 - AluY SINE Alu -130 181 1 2477 83 0 3 chr17 3730246 3730548 -85774005 - AluSg SINE Alu -9 301 1 915 120 0 35 chr17 3730549 3730691 -85773862 - AluJo SINE Alu -175 137 1 199 333 23 0 chr17 3730732 3730819 -85773734 + L2 LINE L2 3157 3245 -27 181 268 0 0 chr17 3731726 3731767 -85772786 - L2 LINE L2 -26 3246 3206 249 266 0 0 chr17 3732046 3732140 -85772413 + (TG)n Simple_repeat Simple_repeat 1 94 0 627 253 0 0 chr17 3732155 3732504 -85772049 + (TG)n Simple_repeat Simple_repeat 1 349 0 216 0 0 0 chr17 3733451 3733475 -85771078 + (TA)n Simple_repeat Simple_repeat 2 25 0 2660 47 0 0 chr17 3733475 3733771 -85770782 - AluY SINE Alu -15 296 1 2310 98 0 0 chr17 3733771 3734067 -85770486 - AluSx SINE Alu -16 296 1 204 265 47 47 chr17 3734704 3734874 -85769679 + L2 LINE L2 2868 3037 -235 281 275 75 50 chr17 3735825 3735985 -85768568 + MIR3 SINE MIR 30 193 -15 1936 119 29 4 chr17 3736153 3736456 -85768097 + AluSx SINE Alu 1 310 0 672 232 7 13 chr17 3738368 3738523 -85766030 + MER3 DNA MER1_type 3 156 -53 1292 234 68 45 chr17 3739532 3740045 -85764508 + L1MC4 LINE L1 7516 8040 -2 26 0 0 0 chr17 3740046 3740072 -85764481 + AT_rich Low_complexity Low_complexity 1 26 0 2259 65 3 20 chr17 3740124 3740417 -85764136 + AluY SINE Alu 1 288 -23 448 215 25 66 chr17 3740417 3740538 -85764015 + FLAM_A SINE Alu 11 126 -16 2042 128 7 10 chr17 3740599 3740897 -85763656 + AluSx SINE Alu 1 297 -15 302 296 181 10 chr17 3741067 3741266 -85763287 - MIR SINE MIR -18 244 12 2404 81 10 0 chr17 3741303 3741601 -85762952 - AluSx SINE Alu -11 301 1 570 226 96 7 chr17 3741674 3741820 -85762733 + MLT1A2 LTR MaLR 1 159 -215 315 278 10 21 chr17 3742126 3742223 -85762330 - MIR3 SINE MIR -20 188 93 2419 77 0 3 chr17 3742426 3742723 -85761830 - AluSx SINE Alu -16 296 1 180 0 0 0 chr17 3743063 3743083 -85761470 + (A)n Simple_repeat Simple_repeat 1 20 0 191 287 84 28 chr17 3743872 3744015 -85760538 - L2 LINE L2 0 3313 3163 448 304 37 12 chr17 3744121 3744282 -85760271 - L2 LINE L2 -20 3252 3088 620 117 11 0 chr17 3745091 3745185 -85759368 - FRAM SINE Alu -24 152 58 225 330 10 20 chr17 3745185 3745285 -85759268 - L2 LINE L2 -529 2785 2687 460 92 0 0 chr17 3745285 3745350 -85759203 + L1MB8 LINE L1 5377 5441 -737 856 128 7 54 chr17 3745350 3745498 -85759055 + FLAM_C SINE Alu 1 141 -2 3122 163 82 43 chr17 3745501 3745772 -85758781 + L1MB8 LINE L1 5428 5687 -491 2214 104 3 10 chr17 3745772 3746081 -85758472 + AluSq SINE Alu 1 307 -6 3122 163 82 43 chr17 3746081 3746531 -85758022 + L1MB8 LINE L1 5687 6177 -1 22 0 0 0 chr17 3748586 3748608 -85755945 + AT_rich Low_complexity Low_complexity 1 22 0 333 129 32 0 chr17 3750098 3750160 -85754393 - AluSq SINE Alu 0 302 239 1199 99 0 12 chr17 3750160 3750322 -85754231 - AluSq SINE Alu -153 160 1 248 319 44 44 chr17 3751637 3751750 -85752803 + L2 LINE L2 2981 3093 -179 259 292 15 0 chr17 3751764 3751829 -85752724 + L2 LINE L2 3245 3310 -3 1226 194 116 47 chr17 3751943 3752263 -85752290 - MER2 DNA MER2_type -2 342 1 2182 60 21 32 chr17 3753130 3753415 -85751138 + AluY SINE Alu 14 295 -16 289 274 89 32 chr17 3753544 3753668 -85750885 + L1ME4a LINE L1 5389 5519 -602 2472 72 3 3 chr17 3753717 3754023 -85750530 + AluY SINE Alu 3 308 -3 367 259 147 45 chr17 3754119 3754331 -85750222 + L1ME4a LINE L1 5718 5974 -147 231 36 0 0 chr17 3754331 3754359 -85750194 + (CA)n Simple_repeat Simple_repeat 1 28 0 367 259 147 45 chr17 3754359 3754459 -85750094 + L1ME4a LINE L1 5974 6062 -59 303 140 0 0 chr17 3754861 3754911 -85749642 + (TCC)n Simple_repeat Simple_repeat 2 51 0 2680 213 79 20 chr17 3755177 3755648 -85748905 - MER82 DNA MER2_type -6 647 131 2463 72 0 10 chr17 3755648 3755955 -85748598 + AluY SINE Alu 1 304 -7 2680 213 79 20 chr17 3755955 3756088 -85748465 - MER82 DNA MER2_type -522 131 7 1808 171 0 33 chr17 3756328 3756632 -85747921 - AluJb SINE Alu -14 298 5 2202 101 3 10 chr17 3757045 3757343 -85747210 + AluSg SINE Alu 1 296 -14 2319 98 0 0 chr17 3757813 3758110 -85746443 - AluSx SINE Alu -5 307 11 2865 199 155 57 chr17 3759238 3759431 -85745122 + L1MC4 LINE L1 6813 6986 -1056 2228 74 3 101 chr17 3759431 3759768 -85744785 + AluSc SINE Alu 1 304 -5 2865 199 155 57 chr17 3759768 3759986 -85744567 + L1MC4 LINE L1 6986 7181 -861 826 162 0 29 chr17 3759986 3760122 -85744431 - FLAM_C SINE Alu -1 132 1 2865 199 155 57 chr17 3760122 3760710 -85743843 + L1MC4 LINE L1 7181 7911 -131 330 132 0 0 chr17 3760725 3760778 -85743775 + (CATA)n Simple_repeat Simple_repeat 2 54 0 317 167 50 0 chr17 3760778 3760838 -85743715 - L1MCa LINE L1 -4358 2068 2006 182 114 0 29 chr17 3760839 3760874 -85743679 + (CATA)n Simple_repeat Simple_repeat 4 37 0 322 227 15 0 chr17 3760874 3760940 -85743613 - L1MCa LINE L1 -4363 2063 1997 218 295 16 0 chr17 3761208 3761269 -85743284 - L3 LINE CR1 -5 1572 1511 22 0 0 0 chr17 3761465 3761487 -85743066 + AT_rich Low_complexity Low_complexity 1 22 0 819 243 128 16 chr17 3761590 3761841 -85742712 + L2 LINE L2 3035 3313 0 1592 177 57 13 chr17 3762764 3763163 -85741390 + AluJo SINE Alu 1 412 0 2153 39 19 8 chr17 3763163 3763423 -85741130 + AluY SINE Alu 33 295 -16 286 171 89 0 chr17 3763423 3763539 -85741014 + GA-rich Low_complexity Low_complexity 9 138 0 325 372 16 0 chr17 3764028 3764157 -85740396 + MIR3 SINE MIR 60 190 -18 235 170 0 0 chr17 3764254 3764301 -85740252 - L1MA10 LINE L1 -10 6324 6278 2246 129 0 0 chr17 3764309 3764618 -85739935 - AluSx SINE Alu -3 309 1 882 220 6 6 chr17 3764620 3764802 -85739751 + MER58A DNA MER1_type 43 224 0 234 312 35 28 chr17 3766033 3766174 -85738379 + L1ME4a LINE L1 4561 4702 -1444 383 217 28 32 chr17 3766219 3766398 -85738155 + L1M2 LINE L1 5283 5463 -693 404 296 165 53 chr17 3766575 3766933 -85737620 + L1ME4a LINE L1 5620 6017 -104 2266 83 10 0 chr17 3766994 3767282 -85737271 - AluSc SINE Alu -18 291 1 2474 82 3 0 chr17 3767305 3767610 -85736943 - AluSp SINE Alu -7 306 1 2302 95 7 3 chr17 3767691 3767997 -85736556 + AluY SINE Alu 1 307 -4 1804 84 33 18 chr17 3768144 3768301 -85736252 + L1MA1 LINE L1 6026 6190 -112 2371 109 0 0 chr17 3768301 3768603 -85735950 + AluSx SINE Alu 1 302 -10 1804 84 33 18 chr17 3768603 3768718 -85735835 + L1MA1 LINE L1 6190 6302 0 2401 74 10 3 chr17 3768751 3769060 -85735493 + AluY SINE Alu 1 311 0 21 100 0 0 chr17 3769173 3769243 -85735310 + AT_rich Low_complexity Low_complexity 1 70 0 1925 154 0 10 chr17 3769371 3769663 -85734890 + AluJo SINE Alu 5 293 -19 942 153 35 0 chr17 3769663 3769807 -85734746 - AluJb SINE Alu -162 150 2 810 135 15 60 chr17 3769924 3770057 -85734496 + FLAM_C SINE Alu 1 127 -16 1570 109 9 5 chr17 3770893 3771104 -85733449 + AluSp SINE Alu 1 212 -101 318 130 0 0 chr17 3771104 3771158 -85733395 + FLAM SINE Alu 78 131 -2 285 366 92 7 chr17 3771251 3771404 -85733149 + L3 LINE CR1 355 520 -1057 808 299 267 20 chr17 3771434 3772172 -85732381 + L3 LINE CR1 648 1567 -10 706 274 101 21 chr17 3772283 3772520 -85732033 + MIR SINE MIR 7 262 0 816 285 37 32 chr17 3772666 3772772 -85731781 - MIR SINE MIR -1 261 157 2487 92 0 0 chr17 3772772 3773077 -85731476 + AluSg SINE Alu 1 305 -5 816 285 37 32 chr17 3773077 3773216 -85731337 - MIR SINE MIR -105 157 15 240 242 0 32 chr17 3773222 3773268 -85731285 + MER5B DNA MER1_type 1 46 -132 2181 133 3 0 chr17 3773268 3773577 -85730976 + AluSg SINE Alu 1 310 0 240 242 0 32 chr17 3773577 3773592 -85730961 + MER5B DNA MER1_type 46 60 -118 2195 85 32 0 chr17 3773616 3773899 -85730654 + AluSg SINE Alu 1 292 -18 1767 100 60 8 chr17 3773910 3774160 -85730393 + AluSg SINE Alu 45 307 -3 29 0 0 0 chr17 3774379 3774408 -85730145 + AT_rich Low_complexity Low_complexity 1 29 0 320 282 137 3 chr17 3774409 3774526 -85730027 - MIR SINE MIR -65 143 55 644 278 44 8 chr17 3775033 3775285 -85729268 + MIR SINE MIR 2 262 0 2336 99 0 0 chr17 3775754 3776047 -85728506 - AluSx SINE Alu -19 293 1 208 205 26 0 chr17 3776213 3776252 -85728301 + MIR SINE MIR 40 79 -129 335 200 0 0 chr17 3776823 3776883 -85727670 + L2 LINE L2 3213 3272 0 251 330 22 11 chr17 3776967 3777058 -85727495 - MIR SINE MIR -115 147 56 2257 87 35 0 chr17 3777385 3777674 -85726879 - AluSc SINE Alu -10 299 1 1183 155 0 0 chr17 3778074 3778248 -85726305 + AluJb SINE Alu 125 298 -14 2050 129 0 0 chr17 3778547 3778826 -85725727 + AluSx SINE Alu 6 284 -28 1716 166 8 0 chr17 3779078 3779343 -85725210 - AluJb SINE Alu -45 267 1 1580 186 43 7 chr17 3779632 3779933 -85724620 - AluJo SINE Alu 0 312 1 2140 124 10 3 chr17 3779936 3780242 -85724311 - AluSx SINE Alu -3 309 2 336 331 23 39 chr17 3780577 3780707 -85723846 + MIR SINE MIR 3 130 -132 187 253 203 0 chr17 3780657 3780736 -85723817 + L2 LINE L2 2019 2113 -1201 * 206 220 231 22 chr17 3780877 3780968 -85723585 + L2 LINE L2 3192 3301 -12 1911 100 4 0 chr17 3780968 3781217 -85723336 + AluSp SINE Alu 1 250 -63 946 44 9 0 chr17 3781219 3781352 -85723201 + AluSp/q SINE Alu 169 302 0 251 183 366 0 chr17 3781468 3781539 -85723014 - FLAM_A SINE Alu -23 110 14 591 226 242 0 chr17 3782933 3783119 -85721434 - MIR SINE MIR -2 260 30 184 271 294 0 chr17 3783218 3783303 -85721250 - MIR SINE MIR -63 145 36 1039 121 0 0 chr17 3783441 3783685 -85720868 - FLAM_C SINE Alu 0 244 1 247 254 127 87 chr17 3783687 3783813 -85720740 + MIR3 SINE MIR 58 188 -20 542 208 82 60 chr17 3783843 3784026 -85720527 + MIR SINE MIR 20 206 -56 2206 84 49 0 chr17 3784171 3784456 -85720097 + AluSg SINE Alu 1 299 -11 180 0 0 0 chr17 3784487 3784507 -85720046 + (TG)n Simple_repeat Simple_repeat 2 21 0 627 253 78 34 chr17 3784958 3785247 -85719306 - LTR37B LTR ERV1 0 458 139 2670 43 0 0 chr17 3785259 3785561 -85718992 - AluY SINE Alu -9 302 1 2577 70 0 10 chr17 3785566 3785880 -85718673 - AluY SINE Alu 0 311 1 2143 104 0 7 chr17 3786062 3786349 -85718204 - AluSg1 SINE Alu -23 286 2 328 320 77 37 chr17 3786369 3786641 -85717912 - L2 LINE L2 -1267 2047 1765 2071 135 0 0 chr17 3786673 3786981 -85717572 - AluSx SINE Alu 0 308 1 2169 95 48 7 chr17 3787374 3787668 -85716885 - AluSx SINE Alu -6 306 1 209 271 0 17 chr17 3787695 3787754 -85716799 + CT-rich Low_complexity Low_complexity 1 58 0 2183 90 4 0 chr17 3787755 3788033 -85716520 - AluSg SINE Alu -31 279 1 507 311 167 37 chr17 3788048 3788722 -85715831 + L2 LINE L2 1928 2513 -759 1926 163 10 0 chr17 3788722 3789028 -85715525 - AluJb SINE Alu -1 311 3 507 311 167 37 chr17 3789028 3789552 -85715001 + L2 LINE L2 2513 3272 0 2402 66 0 7 chr17 3789687 3789975 -85714578 + AluSg SINE Alu 10 295 -15 237 33 0 0 chr17 3789976 3790006 -85714547 + (TCTCCC)n Simple_repeat Simple_repeat 2 31 0 10935 30 16 87 chr17 3790006 3791489 -85713064 + SVA Other Other 1 1378 -8 537 115 29 132 chr17 3791502 3791653 -85712900 + L1MC3 LINE L1 5891 6056 -1729 2165 105 0 39 chr17 3791653 3791825 -85712728 - AluSg SINE Alu -16 294 138 2360 70 0 3 chr17 3791825 3792111 -85712442 - AluY SINE Alu -26 285 1 2165 105 0 39 chr17 3792111 3792244 -85712309 - AluSg SINE Alu -172 138 1 537 115 29 132 chr17 3792244 3792506 -85712047 + L1MC3 LINE L1 6056 6343 -1442 2155 104 14 0 chr17 3792506 3792795 -85711758 - AluSx SINE Alu -19 293 1 537 115 29 132 chr17 3792795 3792847 -85711706 + L1MC3 LINE L1 6343 6399 -1386 2596 54 0 0 chr17 3792847 3793143 -85711410 - AluY SINE Alu -15 296 1 537 115 29 132 chr17 3793143 3793160 -85711393 + L1MC3 LINE L1 6399 7783 -2 562 189 9 9 chr17 3793174 3793280 -85711273 + MER5B DNA MER1_type 46 151 -27 207 313 0 0 chr17 3794305 3794353 -85710200 - L2 LINE L2 -18 3254 3207 3904 183 55 31 chr17 3794390 3794469 -85710084 + MER21B LTR ERV1 6 82 -781 2571 56 0 3 chr17 3794469 3794773 -85709780 - AluY SINE Alu -8 303 1 3904 183 55 31 chr17 3794773 3795454 -85709099 + MER21B LTR ERV1 82 790 -73 2391 56 42 0 chr17 3795454 3795740 -85708813 - AluY SINE Alu -13 298 1 3904 183 55 31 chr17 3795740 3795810 -85708743 + MER21B LTR ERV1 790 857 -6 2275 70 20 20 chr17 3795827 3796127 -85708426 + AluSx SINE Alu 5 304 -8 364 284 63 0 chr17 3796141 3796236 -85708317 - MIR SINE MIR -115 147 47 2104 128 0 23 chr17 3799032 3799336 -85705217 - AluJb SINE Alu -15 297 1 2281 105 3 10 chr17 3799613 3799917 -85704636 + AluSq SINE Alu 1 302 -11 713 176 0 17 chr17 3799992 3800111 -85704442 + FLAM_C SINE Alu 2 118 -25 2107 116 17 0 chr17 3800349 3800641 -85703912 - AluJo SINE Alu -9 303 7 2523 55 0 0 chr17 3800652 3800945 -85703608 - AluY SINE Alu -18 293 1 439 141 0 0 chr17 3800945 3801016 -85703537 - MER94 DNA DNA -53 81 11 813 293 112 49 chr17 3803018 3803123 -85701430 - L2 LINE L2 0 3313 3216 2207 91 0 7 chr17 3803123 3803420 -85701133 - AluSq SINE Alu -18 295 1 813 293 112 49 chr17 3803420 3804014 -85700539 - L2 LINE L2 -97 3216 2564 243 263 66 13 chr17 3804926 3805002 -85699551 + L2 LINE L2 3192 3271 -1 2243 90 0 3 chr17 3805051 3805350 -85699203 - AluY SINE Alu -11 300 3 2355 57 37 0 chr17 3805356 3805656 -85698897 - AluY SINE Alu 0 311 1 298 293 40 0 chr17 3806608 3806707 -85697846 - MIR SINE MIR -59 149 47 2500 51 0 0 chr17 3806768 3807064 -85697489 - AluY SINE Alu -15 296 1 2462 64 0 6 chr17 3807701 3808055 -85696498 - AluY SINE Alu 0 352 1 2080 82 89 0 chr17 3808063 3808345 -85696208 - AluSx SINE Alu -5 307 1 181 286 0 0 chr17 3809162 3809204 -85695349 + L2 LINE L2 3272 3313 0 288 380 39 8 chr17 3809969 3810098 -85694455 - L2 LINE L2 0 3272 3140 926 251 25 4 chr17 3810492 3810771 -85693782 + L1MC4 LINE L1 7460 7744 -298 2105 119 0 3 chr17 3810777 3811072 -85693481 - AluSx SINE Alu -18 294 1 1036 96 0 7 chr17 3811072 3811208 -85693345 - AluSq/x SINE Alu -178 135 1 2502 52 0 3 chr17 3811239 3811546 -85693007 + AluY SINE Alu 1 306 -5 528 177 3 9 chr17 3811546 3811670 -85692883 + L1MC4 LINE L1 7670 7785 0 1624 168 45 17 chr17 3811691 3811982 -85692571 - AluJo SINE Alu -13 299 1 185 341 57 23 chr17 3812335 3812423 -85692130 + L2 LINE L2 3168 3258 -14 214 238 0 63 chr17 3813012 3813075 -85691478 - MIR SINE MIR -130 78 20 2419 83 0 0 chr17 3813145 3813457 -85691096 - AluSx SINE Alu 0 312 1 254 316 13 0 chr17 3813964 3814040 -85690513 + G-rich Low_complexity Low_complexity 1 77 0 194 100 0 0 chr17 3814078 3814108 -85690445 - L2 LINE L2 -20 3293 3264 418 270 91 102 chr17 3814179 3814368 -85690185 + L2 LINE L2 2232 2417 -897 191 35 0 35 chr17 3814368 3814397 -85690156 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 418 270 91 102 chr17 3814397 3814581 -85689972 + L2 LINE L2 2417 2601 -713 208 254 12 23 chr17 3814938 3815035 -85689518 + MIR SINE MIR 60 153 -61 231 36 0 0 chr17 3815180 3815208 -85689345 + (TATG)n Simple_repeat Simple_repeat 1 28 0 2256 106 0 0 chr17 3815210 3815513 -85689040 - AluSq SINE Alu -10 303 1 463 312 60 54 chr17 3815634 3816258 -85688295 + L2 LINE L2 2553 3211 -61 535 263 103 4 chr17 3817110 3817342 -85687211 - MER112 DNA MER1_type -1 259 5 387 286 7 57 chr17 3817538 3817678 -85686875 + MIR SINE MIR 56 188 -74 354 262 23 78 chr17 3818235 3818423 -85686130 - MIR3 SINE MIR -67 141 15 578 190 0 0 chr17 3818513 3818613 -85685940 - MIR SINE MIR -52 210 111 267 351 52 22 chr17 3820020 3820154 -85684399 - L3 LINE CR1 -18 1559 1422 190 119 119 0 chr17 3820154 3820196 -85684357 - L3 LINE CR1 -123 1454 1408 339 352 132 20 chr17 3821375 3821679 -85682874 + L3 LINE CR1 1176 1513 -64 2118 111 0 0 chr17 3822759 3823039 -85681514 + AluSx SINE Alu 11 290 -22 219 286 102 20 chr17 3823512 3823610 -85680943 + MIR SINE MIR 32 137 -71 382 311 107 0 chr17 3824293 3824415 -85680138 + L2 LINE L2 3179 3313 0 181 270 63 16 chr17 3824420 3824483 -85680070 - MIR3 SINE MIR -37 171 106 195 279 211 0 chr17 3824688 3824792 -85679761 - MIR SINE MIR -60 148 23 468 333 92 9 chr17 3824799 3825027 -85679526 + MIR SINE MIR 16 262 0 198 0 0 0 chr17 3825313 3825335 -85679218 + (TG)n Simple_repeat Simple_repeat 2 23 0 252 304 78 48 chr17 3826826 3827056 -85677497 + L2 LINE L2 2246 2482 -832 * 280 317 208 5 chr17 3827050 3827252 -85677301 + L2 LINE L2 2817 3059 -213 1300 267 32 32 chr17 3827566 3828001 -85676552 - L2 LINE L2 -13 3300 2866 315 296 26 17 chr17 3828047 3828162 -85676391 - L2 LINE L2 -189 3083 2968 216 351 53 0 chr17 3828260 3828374 -85676179 - L2 LINE L2 -561 2753 2634 21 0 0 0 chr17 3828872 3828893 -85675660 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr17 3829359 3829381 -85675172 + GC_rich Low_complexity Low_complexity 1 22 0 240 35 0 0 chr17 3829397 3829426 -85675127 + (CCCCG)n Simple_repeat Simple_repeat 4 32 0 30 77 0 0 chr17 3829456 3829521 -85675032 + GC_rich Low_complexity Low_complexity 1 65 0 529 341 38 8 chr17 3830147 3830411 -85674142 + L2 LINE L2 2442 2713 -601 545 278 157 39 chr17 3830461 3830742 -85673811 + L2 LINE L2 2957 3270 -2 887 252 44 53 chr17 3830757 3831078 -85673475 - MLT1J LTR MaLR -191 320 3 296 275 110 16 chr17 3831112 3831171 -85673382 - MIR SINE MIR -28 234 182 800 156 0 30 chr17 3831171 3831306 -85673247 + FLAM_C SINE Alu 3 133 0 296 275 110 16 chr17 3831306 3831415 -85673138 - MIR SINE MIR -80 182 42 316 367 43 31 chr17 3831435 3831759 -85672794 - L2 LINE L2 -1266 2048 1721 781 166 52 140 chr17 3831989 3832063 -85672490 - MER3 DNA MER1_type 0 209 130 2127 83 0 28 chr17 3832063 3832353 -85672200 + AluSx SINE Alu 11 292 -20 781 166 52 140 chr17 3832353 3832507 -85672046 - MER3 DNA MER1_type -79 130 1 299 273 26 0 chr17 3832887 3832964 -85671589 - MIR3 SINE MIR -22 186 108 455 305 43 7 chr17 3833505 3833646 -85670907 - MER5A DNA MER1_type -6 183 38 919 241 50 0 chr17 3833671 3833870 -85670683 + MER3 DNA MER1_type 1 209 0 885 196 25 6 chr17 3835603 3835766 -85668787 - FRAM SINE Alu 0 166 1 2227 99 3 0 chr17 3836218 3836520 -85668033 + AluSx SINE Alu 1 303 -9 2179 120 0 3 chr17 3836570 3836878 -85667675 + AluSx SINE Alu 1 307 -5 360 339 83 32 chr17 3837044 3837262 -85667291 + L2 LINE L2 3084 3312 -1 2448 67 0 0 chr17 3837466 3837766 -85666787 - AluY SINE Alu -11 300 1 633 230 14 0 chr17 3837872 3838020 -85666533 + MER58B DNA MER1_type 190 339 -2 551 360 5 5 chr17 3838214 3838417 -85666136 - MIR SINE MIR -24 238 36 1141 119 11 17 chr17 3838515 3838692 -85665861 - AluSg/x SINE Alu -3 307 132 2139 106 7 7 chr17 3838692 3838995 -85665558 - AluSx SINE Alu -9 303 1 2216 116 0 3 chr17 3838997 3839308 -85665245 - AluSx SINE Alu -2 310 1 2169 95 3 0 chr17 3841992 3842277 -85662276 + AluSq SINE Alu 28 313 0 806 271 50 39 chr17 3842385 3842536 -85662017 + MIR SINE MIR 2 159 -103 2224 82 0 7 chr17 3842536 3842830 -85661723 - AluSc SINE Alu -17 292 1 806 271 50 39 chr17 3842830 3842936 -85661617 + MIR SINE MIR 159 262 0 1692 240 52 26 chr17 3843150 3843608 -85660945 + MLT1K LTR MaLR 4 473 -3 342 0 0 0 chr17 3843690 3843728 -85660825 + (TG)n Simple_repeat Simple_repeat 2 39 0 2133 104 10 10 chr17 3844678 3844986 -85659567 + AluSq SINE Alu 1 308 -5 382 320 51 13 chr17 3845192 3845351 -85659202 + MIR SINE MIR 21 190 -61 2236 82 0 3 chr17 3845435 3845729 -85658824 - AluSg SINE Alu -17 293 1 837 136 8 0 chr17 3845964 3846096 -85658457 + AluSq/x SINE Alu 1 133 -179 245 317 19 10 chr17 3846098 3846202 -85658351 - L2 LINE L2 -12 3301 3197 292 207 0 0 chr17 3846202 3846260 -85658293 - Tigger5 DNA MER2_type 0 2323 2266 238 171 0 0 chr17 3846326 3846367 -85658186 - Tigger5 DNA MER2_type 0 2323 2283 2409 81 0 0 chr17 3846367 3846674 -85657879 - AluSx SINE Alu -5 307 1 219 374 53 16 chr17 3846718 3846905 -85657648 + L2 LINE L2 2334 2527 -787 528 216 0 26 chr17 3847207 3847323 -85657230 + L2 LINE L2 3199 3311 -2 346 309 24 48 chr17 3847357 3847370 -85657183 + Charlie8 DNA MER1_type 69 81 -260 1740 177 0 16 chr17 3847370 3847687 -85656866 - AluJb SINE Alu 0 312 1 222 37 0 0 chr17 3847691 3847718 -85656835 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 346 309 24 48 chr17 3847718 3847867 -85656686 + Charlie8 DNA MER1_type 84 232 -109 1180 249 3 21 chr17 3848242 3848531 -85656022 + MLT1K LTR MaLR 142 425 -163 2381 93 0 0 chr17 3848718 3849030 -85655523 - AluSx SINE Alu 0 312 1 215 88 0 0 chr17 3849425 3849459 -85655094 + L2 LINE L2 3025 3058 -214 191 294 0 0 chr17 3849462 3849513 -85655040 - L3 LINE CR1 -111 1466 1416 2126 101 20 3 chr17 3849530 3849826 -85654727 - AluSx SINE Alu -11 301 1 245 232 29 14 chr17 3850589 3850658 -85653895 + MIR SINE MIR 29 98 -164 205 121 0 0 chr17 3850748 3850781 -85653772 + L3 LINE CR1 1423 1455 -122 364 272 18 9 chr17 3851115 3851229 -85653324 + MIR3 SINE MIR 15 129 -79 386 184 53 35 chr17 3853460 3853574 -85650979 + MIR SINE MIR 37 152 -110 340 244 106 32 chr17 3853756 3853879 -85650674 - MIR3 SINE MIR -21 187 56 354 146 11 34 chr17 3854390 3854479 -85650074 + GA-rich Low_complexity Low_complexity 1 87 0 846 99 10 48 chr17 3854486 3854788 -85649765 + (GGGA)n Simple_repeat Simple_repeat 1 290 0 417 39 0 0 chr17 3854824 3854875 -85649678 + (TCC)n Simple_repeat Simple_repeat 1 51 0 407 229 48 9 chr17 3855308 3855413 -85649140 - MIR SINE MIR -79 183 75 1782 169 0 43 chr17 3856111 3856255 -85648298 + AluJb SINE Alu 1 150 -162 1731 153 3 3 chr17 3856255 3856566 -85647987 + AluSq SINE Alu 4 314 0 1782 169 0 43 chr17 3856566 3856746 -85647807 + AluJb SINE Alu 150 312 0 2383 87 0 3 chr17 3856904 3857252 -85647301 - AluSg SINE Alu 0 347 1 307 250 0 22 chr17 3857264 3857284 -85647269 - L1MA10 LINE L1 0 6334 6315 674 314 98 15 chr17 3857284 3857609 -85646944 - L1ME1 LINE L1 -9 6157 5806 194 246 0 49 chr17 3858153 3858214 -85646339 + MIR SINE MIR 88 145 -63 239 319 0 0 chr17 3858439 3858508 -85646045 + MER45A DNA AcHobo 5 73 -105 247 286 0 0 chr17 3858697 3858760 -85645793 - L1ME3 LINE L1 -7 6155 6093 2359 92 0 0 chr17 3858764 3859069 -85645484 - AluSx SINE Alu -7 305 1 382 202 61 0 chr17 3859075 3859174 -85645379 + MER45A DNA AcHobo 74 178 0 1705 122 54 14 chr17 3859655 3859959 -85644594 + AluSx SINE Alu 1 312 0 2148 90 4 0 chr17 3862990 3863268 -85641285 - AluSx SINE Alu -33 279 1 252 199 14 96 chr17 3866551 3866697 -85637856 + (CCCCAG)n Simple_repeat Simple_repeat 1 134 0 2183 80 28 0 chr17 3867265 3867554 -85636999 + AluSx SINE Alu 1 297 -15 2588 46 0 0 chr17 3867914 3868220 -85636333 - AluY SINE Alu -5 306 1 2073 110 0 0 chr17 3868517 3868843 -85635710 - AluSx SINE Alu 0 326 1 1754 169 0 3 chr17 3868843 3869133 -85635420 - AluJb SINE Alu -17 295 7 2346 50 4 0 chr17 3869399 3869701 -85634852 + AluSx SINE Alu 1 303 0 2241 90 3 0 chr17 3869857 3870156 -85634397 + AluY SINE Alu 3 302 -9 2320 89 0 0 chr17 3870312 3870616 -85633937 - AluSx SINE Alu -1 311 8 1594 176 53 7 chr17 3870626 3870910 -85633643 - AluJb SINE Alu -15 297 1 2221 106 3 0 chr17 3870919 3871222 -85633331 - AluSx SINE Alu -8 304 1 462 228 139 15 chr17 3871726 3871928 -85632625 + MLT1K LTR MaLR 30 256 -332 2330 76 0 0 chr17 3871935 3872226 -85632327 - AluSx SINE Alu -10 302 12 664 133 20 0 chr17 3872226 3872324 -85632229 - AluS SINE Alu -213 100 1 236 277 38 107 chr17 3872324 3872483 -85632070 + MLT1K LTR MaLR 249 396 -192 339 25 0 0 chr17 3873121 3873161 -85631392 + (CA)n Simple_repeat Simple_repeat 2 41 0 214 269 32 11 chr17 3873404 3873497 -85631056 + (CA)n Simple_repeat Simple_repeat 1 95 0 205 370 11 0 chr17 3874280 3874372 -85630181 + G-rich Low_complexity Low_complexity 3 95 0 2136 108 0 0 chr17 3874551 3874839 -85629714 + AluSx SINE Alu 1 288 -24 2099 110 31 0 chr17 3874946 3875236 -85629317 - AluSx SINE Alu -13 299 1 1889 165 3 0 chr17 3875285 3875582 -85628971 + AluJo SINE Alu 1 298 -14 798 233 75 43 chr17 3875806 3875906 -85628647 + L1ME2 LINE L1 5724 5819 -345 2440 69 0 7 chr17 3875906 3876212 -85628341 + AluSc SINE Alu 1 304 -5 798 233 75 43 chr17 3876212 3876433 -85628120 + L1ME2 LINE L1 5819 6055 -109 213 65 0 0 chr17 3876433 3876464 -85628089 + (T)n Simple_repeat Simple_repeat 1 31 0 665 106 0 0 chr17 3876474 3876559 -85627994 - AluJ/FLAM SINE Alu -226 86 2 383 286 0 0 chr17 3876566 3876671 -85627882 + L1ME2 LINE L1 6050 6154 -10 2217 106 0 0 chr17 3876906 3877207 -85627346 - AluSx SINE Alu -11 301 1 1778 116 64 4 chr17 3879405 3879706 -85624847 + AluSx SINE Alu 1 317 0 504 350 86 0 chr17 3880360 3880663 -85623890 + L2 LINE L2 2439 2767 -547 25 65 0 0 chr17 3881393 3881439 -85623114 + GC_rich Low_complexity Low_complexity 1 46 0 224 255 255 20 chr17 3881829 3881931 -85622622 + MIR SINE MIR 20 145 -63 270 229 55 73 chr17 3882067 3882176 -85622377 - L3 LINE CR1 -101 1476 1370 2213 88 14 7 chr17 3882365 3882661 -85621892 + AluSc SINE Alu 1 298 -11 2030 107 3 27 chr17 3882669 3882969 -85621584 + AluSx SINE Alu 1 293 -19 437 313 78 6 chr17 3884341 3884520 -85620033 + L2 LINE L2 3094 3285 -28 908 142 15 0 chr17 3884984 3885118 -85619435 - AluJo SINE Alu -176 136 1 2329 98 3 0 chr17 3885246 3885553 -85619000 + AluSx SINE Alu 1 308 -4 871 205 35 57 chr17 3885970 3886199 -85618354 + MIR SINE MIR 39 262 0 1887 131 0 0 chr17 3886279 3886546 -85618007 + AluSq SINE Alu 1 267 -46 2263 70 0 7 chr17 3886562 3886847 -85617706 - AluSq SINE Alu -14 299 17 825 124 0 8 chr17 3887463 3887631 -85616922 + AluSg/x SINE Alu 175 312 0 753 152 42 55 chr17 3888356 3888495 -85616058 + MER5A DNA MER1_type 8 146 -43 1846 98 58 4 chr17 3888495 3888769 -85615784 - AluSx SINE Alu -23 289 1 753 152 42 55 chr17 3888769 3888794 -85615759 + MER5A DNA MER1_type 146 170 -19 956 187 36 67 chr17 3888933 3888993 -85615560 + MER20 DNA MER1_type 1 61 -158 1834 161 0 7 chr17 3888993 3889291 -85615262 - AluJo SINE Alu -16 296 1 956 187 36 67 chr17 3889291 3889455 -85615098 + MER20 DNA MER1_type 61 218 -1 274 242 30 106 chr17 3890346 3890478 -85614075 - MIR3 SINE MIR -10 198 77 2373 61 10 0 chr17 3890897 3891193 -85613360 - AluSg SINE Alu -11 299 1 226 344 23 42 chr17 3891212 3891441 -85613112 - MIR SINE MIR -8 254 30 216 310 56 0 chr17 3891510 3891581 -85612972 + MER5A DNA MER1_type 9 83 -106 2232 81 0 0 chr17 3892269 3892581 -85611972 - AluSx SINE Alu 0 312 1 366 184 11 35 chr17 3892661 3892748 -85611805 + MLT1I LTR MaLR 3 87 -322 553 247 117 7 chr17 3892823 3892977 -85611576 + MER3 DNA MER1_type 4 127 -82 494 286 47 52 chr17 3892988 3893201 -85611352 + MLT1I LTR MaLR 197 408 -1 598 290 65 9 chr17 3893540 3893754 -85610799 - MIR SINE MIR -30 232 7 693 288 64 0 chr17 3894462 3894681 -85609872 + MIR SINE MIR 8 240 -22 400 221 106 35 chr17 3894701 3894814 -85609739 + L2 LINE L2 3191 3311 -2 257 370 31 0 chr17 3894812 3894939 -85609614 + L2 LINE L2 2715 2845 -469 * 367 148 0 0 chr17 3895007 3895068 -85609485 - L1MA7 LINE L1 -3 6288 6228 416 230 29 10 chr17 3895095 3895199 -85609354 - L1MC4 LINE L1 -1339 6983 1996 382 246 0 26 chr17 3895178 3895293 -85609260 - L1MC4 LINE L1 -1339 6983 1995 * 320 259 25 25 chr17 3895223 3895298 -85609255 + L1MC3 LINE L1 6571 6646 -1134 * 2009 113 3 27 chr17 3895298 3895598 -85608955 - AluSx SINE Alu -19 293 1 340 367 136 0 chr17 3897016 3897280 -85607273 + L1MC/D LINE L1 5366 5665 -2143 506 337 16 11 chr17 3898165 3898349 -85606204 - MIR SINE MIR -55 207 23 253 260 0 14 chr17 3898601 3898674 -85605879 - MIR SINE MIR -122 140 69 * 945 243 20 0 chr17 3898645 3898847 -85605706 + MIR SINE MIR 57 262 0 39 22 0 0 chr17 3900523 3900569 -85603984 + GC_rich Low_complexity Low_complexity 1 46 0 26 50 0 0 chr17 3900757 3900797 -85603756 + GC_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr17 3900834 3900859 -85603694 + GC_rich Low_complexity Low_complexity 1 25 0 33 0 0 0 chr17 3900883 3900916 -85603637 + GC_rich Low_complexity Low_complexity 1 33 0 262 0 0 0 chr17 3902249 3902278 -85602275 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2018 108 3 46 chr17 3902278 3902601 -85601952 - AluSx SINE Alu -3 309 1 1675 149 0 81 chr17 3902604 3902925 -85601628 - AluJb SINE Alu -17 295 1 200 379 47 18 chr17 3902933 3903102 -85601451 - L3 LINE CR1 -818 759 586 1604 83 0 0 chr17 3903806 3904048 -85600505 - AluSg/x SINE Alu 0 320 79 629 139 0 170 chr17 3904049 3904214 -85600339 - AluSq/x SINE Alu -175 137 1 231 344 122 27 chr17 3904327 3904548 -85600005 - L2 LINE L2 -429 2885 2644 254 198 176 11 chr17 3904661 3904752 -85599801 - MIR SINE MIR -18 244 139 245 200 123 15 chr17 3904752 3904817 -85599736 + MER45B DNA AcHobo 1 72 -968 746 190 0 7 chr17 3904818 3904955 -85599598 - FLAM_A SINE Alu -6 136 1 4354 195 34 35 chr17 3904955 3904995 -85599558 + MER45B DNA AcHobo 63 102 -1479 2279 85 0 3 chr17 3904995 3905300 -85599253 - AluSx SINE Alu -8 304 1 4354 195 34 35 chr17 3905300 3906061 -85598492 + MER45B DNA AcHobo 102 862 -719 2191 93 0 26 chr17 3906061 3906371 -85598182 + AluSx SINE Alu 1 302 -10 4354 195 34 35 chr17 3906371 3906474 -85598079 + MER45B DNA AcHobo 862 969 -612 1568 176 3 37 chr17 3906474 3906797 -85597756 - AluJo SINE Alu 0 312 1 4354 195 34 35 chr17 3906797 3906868 -85597685 + MER45B DNA AcHobo 969 1039 -1 258 283 186 18 chr17 3906869 3906982 -85597571 - MIR SINE MIR -116 146 15 199 302 39 31 chr17 3907520 3907649 -85596904 - MIR3 SINE MIR -28 180 51 2277 96 0 0 chr17 3907989 3908292 -85596261 + AluSq SINE Alu 1 303 -10 1726 149 33 10 chr17 3908301 3908602 -85595951 + AluJo SINE Alu 5 312 0 231 225 225 17 chr17 3908772 3908892 -85595661 - L2 LINE L2 -192 3080 2936 324 261 85 8 chr17 3910211 3910341 -85594212 + L2 LINE L2 2876 3015 -257 227 380 52 18 chr17 3911056 3911285 -85593268 + L2 LINE L2 2826 3062 -210 205 359 19 28 chr17 3911465 3911571 -85592982 + L2 LINE L2 3208 3312 -1 2175 107 3 10 chr17 3911741 3911914 -85592639 - AluSq SINE Alu -6 307 135 2471 68 0 0 chr17 3911914 3912221 -85592332 - AluY SINE Alu -4 307 1 2175 107 3 10 chr17 3912221 3912356 -85592197 - AluSq SINE Alu -178 135 1 261 284 34 23 chr17 3914062 3914150 -85590403 - MIR SINE MIR -170 92 4 348 286 95 8 chr17 3914349 3914479 -85590074 + MIR SINE MIR 42 181 -60 2217 79 3 13 chr17 3914504 3914809 -85589744 + AluSx SINE Alu 1 302 -10 615 244 78 0 chr17 3915446 3915626 -85588927 + MIR SINE MIR 9 202 -60 694 252 172 64 chr17 3915707 3916084 -85588469 + MLT1L LTR MaLR 122 539 -76 866 230 0 0 chr17 3916085 3916263 -85588290 - AluSg/x SINE Alu -1 311 134 2199 106 0 3 chr17 3916287 3916589 -85587964 + AluSg SINE Alu 1 301 -9 1540 142 0 4 chr17 3916747 3916979 -85587574 - AluJo SINE Alu -81 231 1 588 261 6 24 chr17 3916979 3917144 -85587409 + MLT1K LTR MaLR 421 582 -6 301 276 38 0 chr17 3918036 3918141 -85586412 + MIR3 SINE MIR 85 193 -15 282 29 0 0 chr17 3918566 3918601 -85585952 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 2159 107 0 3 chr17 3918723 3919022 -85585531 - AluSx SINE Alu -14 298 1 2063 93 7 0 chr17 3919947 3920259 -85584294 + AluY SINE Alu 1 314 0 436 282 83 33 chr17 3920470 3920651 -85583902 + MLT1K LTR MaLR 396 585 -3 3673 105 57 0 chr17 3921156 3921316 -85583237 - MER41A LTR ERV1 0 554 405 2205 111 7 0 chr17 3921316 3921623 -85582930 - AluSg SINE Alu -1 309 1 3673 105 57 0 chr17 3921623 3921985 -85582568 - MER41A LTR ERV1 -149 405 2 2226 96 3 0 chr17 3922211 3922514 -85582039 - AluSp SINE Alu -9 304 1 700 177 51 162 chr17 3927314 3927843 -85576710 + Charlie1 DNA MER1_type 5 2755 -6 333 276 82 18 chr17 3928413 3928583 -85575970 + MIR3 SINE MIR 23 203 -5 996 174 38 136 chr17 3929359 3929675 -85574878 + AluY SINE Alu 11 295 -16 2186 104 0 19 chr17 3929746 3930062 -85574491 + AluSg SINE Alu 1 310 0 930 192 6 24 chr17 3930252 3930419 -85574134 + FRAM SINE Alu 3 166 0 1733 166 0 7 chr17 3930427 3930722 -85573831 + AluJb SINE Alu 1 293 -19 644 276 165 11 chr17 3931758 3932200 -85572353 + L1ME4a LINE L1 4061 4570 -1576 493 133 0 0 chr17 3932200 3932275 -85572278 + AluJ/FRAM SINE Alu 226 300 -12 581 309 76 12 chr17 3932279 3932609 -85571944 + L1ME4a LINE L1 4918 5268 -878 196 348 0 14 chr17 3933615 3933684 -85570869 - MIR SINE MIR -125 83 16 410 209 23 0 chr17 3934008 3934094 -85570459 - L2 LINE L2 -8 3264 3177 2500 38 0 0 chr17 3936404 3936695 -85567858 + AluY SINE Alu 1 291 -20 550 242 242 15 chr17 3936917 3937115 -85567438 - MIR SINE MIR -6 256 14 1068 168 89 5 chr17 3937430 3937632 -85566921 - AluJo SINE Alu -1 311 93 186 326 141 44 chr17 3938577 3938939 -85565614 - L2 LINE L2 -10 3262 2866 2151 93 3 0 chr17 3939505 3939794 -85564759 + AluSx SINE Alu 1 290 -22 181 205 26 0 chr17 3940174 3940213 -85564340 + L3 LINE CR1 1344 1383 -194 36 53 0 0 chr17 3942239 3942296 -85562257 + AT_rich Low_complexity Low_complexity 1 57 0 726 159 0 51 chr17 3942296 3942434 -85562119 - FLAM_A SINE Alu -1 132 2 1322 153 55 0 chr17 3942457 3942693 -85561860 - MER57A LTR ERV1 -25 378 130 397 276 173 50 chr17 3942715 3943018 -85561535 + MLT1J LTR MaLR 64 429 -82 5552 50 7 29 chr17 3943018 3943745 -85560808 - SVA Other Other 0 1386 676 397 276 173 50 chr17 3943745 3943840 -85560713 + MLT1J LTR MaLR 429 511 0 503 132 0 0 chr17 3944888 3944964 -85559589 - AluJo SINE Alu -11 301 226 1348 151 27 0 chr17 3945177 3945396 -85559157 - AluJo SINE Alu -87 225 1 273 287 20 10 chr17 3946309 3946410 -85558143 + L1ME4a LINE L1 5544 5645 -476 328 316 38 30 chr17 3946591 3946724 -85557829 + L1ME4a LINE L1 5935 6068 -53 216 328 119 6 chr17 3946745 3946922 -85557631 - L3b LINE CR1 -114 1469 1273 192 125 0 0 chr17 3947663 3947695 -85556858 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 280 358 90 15 chr17 3947721 3948030 -85556523 + L2 LINE L2 2717 3056 -257 303 306 124 8 chr17 3948060 3948181 -85556372 + L2 LINE L2 3136 3270 -2 1514 187 0 39 chr17 3948297 3948602 -85555951 + AluJo SINE Alu 1 293 -19 36 53 0 0 chr17 3950612 3950669 -85553884 + AT_rich Low_complexity Low_complexity 1 57 0 726 159 0 51 chr17 3950669 3950807 -85553746 - FLAM_A SINE Alu -1 132 2 1322 153 55 0 chr17 3950830 3951066 -85553487 - MER57A LTR ERV1 -25 378 130 476 287 178 21 chr17 3951088 3951475 -85553078 + MLT1J LTR MaLR 64 511 0 503 132 0 0 chr17 3952523 3952599 -85551954 - AluJo SINE Alu -11 301 226 1416 151 27 0 chr17 3952812 3953031 -85551522 - AluJo SINE Alu -87 225 1 265 287 20 10 chr17 3953944 3954045 -85550508 + L1ME LINE L1 5544 5645 -476 186 299 124 11 chr17 3954380 3954557 -85549996 - L3b LINE CR1 -114 1469 1273 192 125 0 0 chr17 3955298 3955330 -85549223 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 207 329 117 21 chr17 3955356 3955665 -85548888 + L2 LINE L2 2717 3056 -257 272 306 124 8 chr17 3955695 3955816 -85548737 + L2 LINE L2 3136 3270 -2 1560 190 0 39 chr17 3955932 3956237 -85548316 + AluJo SINE Alu 1 293 -19 2221 126 0 3 chr17 3956581 3956891 -85547662 - AluSx SINE Alu -3 309 1 2175 126 17 0 chr17 3957797 3958091 -85546462 + AluSx SINE Alu 1 299 -13 1608 254 44 45 chr17 3958103 3958630 -85545923 + L1MEc LINE L1 35 560 -5836 779 273 89 61 chr17 3958653 3958905 -85545648 + L1MEc LINE L1 1277 1520 -4876 2241 111 7 3 chr17 3958905 3959212 -85545341 - AluSq SINE Alu -5 308 1 779 273 89 61 chr17 3959212 3959519 -85545034 + L1MEc LINE L1 1520 1852 -4544 532 172 35 52 chr17 3959553 3959669 -85544884 - FLAM_C SINE Alu -18 115 2 2418 91 3 0 chr17 3959679 3959987 -85544566 - AluSq SINE Alu -4 309 1 1381 144 12 37 chr17 3959987 3960230 -85544323 - AluJo SINE Alu -10 302 66 501 202 0 40 chr17 3960248 3960347 -85544206 - FLAM_C SINE Alu -19 124 30 285 172 129 32 chr17 3960358 3960451 -85544102 - L1MEc LINE L1 -4258 2138 2037 745 212 109 0 chr17 3960457 3960650 -85543903 - L1MEc LINE L1 -4320 2076 1863 2016 133 7 7 chr17 3960659 3960959 -85543594 + AluSx SINE Alu 1 300 -12 633 150 150 33 chr17 3960962 3961115 -85543438 + L1MEc LINE L1 2229 2399 -3997 426 218 51 0 chr17 3961201 3961279 -85543274 - MER2 DNA MER2_type -262 83 2 1730 234 10 103 chr17 3961282 3962009 -85542544 + L1MEc LINE L1 2367 3160 -3055 2250 90 7 0 chr17 3962009 3962297 -85542256 + AluSq SINE Alu 22 311 -2 1730 234 10 103 chr17 3962297 3962308 -85542245 + L1MEc LINE L1 3160 3170 -3045 791 178 23 0 chr17 3962308 3962437 -85542116 + FLAM_C SINE Alu 2 133 0 1730 234 10 103 chr17 3962437 3962658 -85541895 + L1MEc LINE L1 3170 3362 -2853 272 157 0 39 chr17 3962766 3962817 -85541736 + Tigger5 DNA MER2_type 7 55 -2268 * 378 173 13 40 chr17 3962784 3962859 -85541694 + Tigger5 DNA MER2_type 2251 2323 0 308 111 0 0 chr17 3962876 3962921 -85541632 + L1ME3A LINE L1 4564 4608 -1538 725 136 183 8 chr17 3962934 3963127 -85541426 - AluJo SINE Alu -24 288 2 429 214 103 0 chr17 3963171 3963288 -85541265 + L1ME3A LINE L1 4633 4761 -1385 1047 107 0 0 chr17 3963289 3963420 -85541133 + AluSq/x SINE Alu 1 131 -181 2155 119 0 3 chr17 3963425 3963758 -85540795 + AluSx SINE Alu 1 332 0 756 220 62 5 chr17 3963759 3963968 -85540585 + L1ME3A LINE L1 4752 4972 -1174 2283 112 0 10 chr17 3965739 3966052 -85538501 - AluSg SINE Alu 0 310 1 268 209 80 92 chr17 3966951 3967114 -85537439 - L1ME4a LINE L1 -27 6094 5934 2033 139 0 7 chr17 3967118 3967412 -85537141 + AluJb SINE Alu 1 292 -20 186 191 0 0 chr17 3967416 3967458 -85537095 + (TATG)n Simple_repeat Simple_repeat 2 43 0 25 0 0 0 chr17 3967461 3967486 -85537067 + AT_rich Low_complexity Low_complexity 1 25 0 1915 89 0 0 chr17 3968242 3968478 -85536075 + AluSq SINE Alu 23 258 -55 244 279 0 0 chr17 3968555 3968616 -85535937 + L1MC4 LINE L1 6460 6520 -1522 627 215 59 59 chr17 3968631 3968850 -85535703 - MER20 DNA MER1_type 0 219 1 2335 74 13 3 chr17 3968856 3969154 -85535399 + AluSq SINE Alu 1 301 -12 234 0 0 0 chr17 3969181 3969207 -85535346 + (CA)n Simple_repeat Simple_repeat 2 27 0 1250 200 216 0 chr17 3969245 3969550 -85535003 + L1MC4 LINE L1 6719 7089 -953 2074 234 55 26 chr17 3969551 3969953 -85534600 + L1MC4 LINE L1 7243 7671 -371 1717 188 10 10 chr17 3969953 3970262 -85534291 - AluJo SINE Alu -3 309 1 2074 234 55 26 chr17 3970262 3970475 -85534078 + L1MC4 LINE L1 7671 7876 -166 894 241 89 59 chr17 3970533 3970902 -85533651 + L1ME3A LINE L1 5492 5880 -290 2073 106 7 3 chr17 3970902 3971213 -85533340 + AluSx SINE Alu 1 312 0 894 241 89 59 chr17 3971213 3971306 -85533247 + L1ME3A LINE L1 5880 5969 -201 291 50 0 0 chr17 3971303 3971343 -85533210 - L1M4 LINE L1 -843 5303 5264 * 1896 132 7 7 chr17 3971559 3971872 -85532681 + AluSx SINE Alu 1 313 0 2633 46 0 3 chr17 3972017 3972320 -85532233 - AluY SINE Alu -9 302 1 716 229 171 28 chr17 3974150 3974577 -85529976 + L1MC4 LINE L1 7555 8042 0 2383 88 0 10 chr17 3975051 3975358 -85529195 - AluSx SINE Alu -8 304 1 417 254 131 60 chr17 3975390 3975673 -85528880 + L2 LINE L2 3010 3312 -1 487 193 0 96 chr17 3976261 3976396 -85528157 + L2 LINE L2 3132 3253 -19 2339 110 0 0 chr17 3976885 3977193 -85527360 - AluSc SINE Alu -1 308 1 2292 96 3 0 chr17 3977248 3977539 -85527014 + AluSx SINE Alu 1 292 -20 2442 97 0 0 chr17 3978569 3978879 -85525674 - AluY SINE Alu -1 310 1 1003 209 18 65 chr17 3979924 3980115 -85524438 + L1MC4 LINE L1 6820 7018 -1024 1896 166 7 0 chr17 3980115 3980411 -85524142 + AluJb SINE Alu 1 298 -14 2237 108 3 0 chr17 3980413 3980709 -85523844 + AluY SINE Alu 1 297 -14 1003 209 18 65 chr17 3980709 3980792 -85523761 + L1MC4 LINE L1 7019 7084 -958 1904 94 50 43 chr17 3981465 3981764 -85522789 - AluSg SINE Alu -9 301 1 659 184 98 90 chr17 3981853 3981982 -85522571 - MIR SINE MIR -25 237 103 1935 136 7 4 chr17 3981982 3982291 -85522262 + AluJb SINE Alu 1 310 0 659 184 98 90 chr17 3982291 3982394 -85522159 - MIR SINE MIR -159 103 2 22 0 0 0 chr17 3983279 3983301 -85521252 + AT_rich Low_complexity Low_complexity 1 22 0 318 261 28 115 chr17 3984051 3984180 -85520373 + L1MC5 LINE L1 7651 7743 -218 2181 101 17 0 chr17 3984180 3984468 -85520085 - AluSx SINE Alu -19 293 1 318 261 28 115 chr17 3984468 3984625 -85519928 + L1MC5 LINE L1 7743 7912 -49 34 0 0 0 chr17 3985302 3985336 -85519217 + AT_rich Low_complexity Low_complexity 1 34 0 1966 153 0 0 chr17 3985337 3985619 -85518934 + AluSx SINE Alu 1 282 -30 236 376 76 27 chr17 3987019 3987428 -85517125 - L2 LINE L2 -18 3254 2826 203 191 85 0 chr17 3988087 3988134 -85516419 + L2 LINE L2 3263 3313 0 1530 142 46 4 chr17 3988551 3988811 -85515742 - MER1B DNA MER1_type 0 339 69 206 217 0 0 chr17 3989360 3989406 -85515147 - L2 LINE L2 -5 3308 3263 234 0 0 0 chr17 3989420 3989446 -85515107 + (TTA)n Simple_repeat Simple_repeat 2 27 0 221 231 92 15 chr17 3989486 3989551 -85515002 + MIR SINE MIR 25 94 -114 299 200 0 57 chr17 3989557 3989627 -85514926 - 5S rRNA rRNA -53 68 3 872 222 17 26 chr17 3990461 3990691 -85513862 - MIR SINE MIR -27 235 8 1766 182 7 3 chr17 3991345 3991642 -85512911 + AluJb SINE Alu 1 298 -14 589 192 90 30 chr17 3991716 3991883 -85512670 + L1ME4a LINE L1 5944 6120 -1 211 281 0 0 chr17 3992318 3992375 -85512178 - MIR SINE MIR -33 229 173 2775 281 142 50 chr17 3992384 3993035 -85511518 + L2 LINE L2 602 1191 -2122 1760 145 57 3 chr17 3993035 3993318 -85511235 + AluSx SINE Alu 1 298 -14 2775 281 142 50 chr17 3993318 3995159 -85509394 + L2 LINE L2 1191 3309 -4 487 231 130 0 chr17 3996061 3996169 -85508384 + FLAM_C SINE Alu 2 123 -20 1591 164 6 68 chr17 3996320 3996481 -85508072 - AluJb SINE Alu -16 296 162 2327 107 0 0 chr17 3996481 3996780 -85507773 - AluSx SINE Alu -13 299 1 1591 164 6 68 chr17 3996780 3996929 -85507624 - AluJb SINE Alu -150 162 5 1233 63 25 0 chr17 3997627 3997786 -85506767 + L1PA5 LINE L1 5989 6151 -3 1828 147 33 16 chr17 3997874 3998181 -85506372 + AluJb SINE Alu 1 312 0 686 226 96 26 chr17 3998307 3998577 -85505976 - L1MC5 LINE L1 -54 7907 7619 1606 137 0 113 chr17 3998601 3998936 -85505617 + AluJo SINE Alu 1 297 -5 194 320 40 0 chr17 3999512 3999587 -85504966 - MIR SINE MIR -77 131 54 24 77 0 0 chr17 4000249 4000301 -85504252 + AT_rich Low_complexity Low_complexity 1 52 0 294 212 47 0 chr17 4000311 4000396 -85504157 + L1ME4a LINE L1 5831 5919 -202 241 231 0 0 chr17 4000429 4000468 -85504085 + AluJo SINE Alu 2 40 -263 581 131 0 47 chr17 4000471 4000578 -85503975 - AluJo/FRAM SINE Alu -2 310 209 1618 182 14 0 chr17 4000578 4000853 -85503700 + AluJo SINE Alu 27 305 -7 207 167 0 0 chr17 4000862 4000904 -85503649 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 2116 104 7 33 chr17 4001041 4001340 -85503213 - AluSq SINE Alu -22 291 1 315 316 43 0 chr17 4001454 4001571 -85502982 - L2 LINE L2 -8 3305 3184 2329 98 3 0 chr17 4002302 4002609 -85501944 + AluSx SINE Alu 1 308 -4 310 333 0 0 chr17 4003052 4003148 -85501405 - MIR SINE MIR -66 142 47 24 0 0 0 chr17 4003337 4003361 -85501192 + AT_rich Low_complexity Low_complexity 1 24 0 221 333 15 0 chr17 4003975 4004041 -85500512 - L2 LINE L2 -217 3055 2989 306 350 14 0 chr17 4004111 4004251 -85500302 - L2 LINE L2 -457 2857 2716 247 295 122 51 chr17 4005149 4005305 -85499248 - L2 LINE L2 -2 3270 3104 1705 161 0 29 chr17 4006182 4006492 -85498061 - AluJo SINE Alu -11 301 1 567 195 88 0 chr17 4007580 4007693 -85496860 - MER58A DNA MER1_type 0 160 38 2337 43 3 13 chr17 4008886 4009187 -85495366 - AluY SINE Alu -13 298 1 1894 137 0 29 chr17 4009208 4009523 -85495030 - AluSx SINE Alu -6 306 1 445 238 32 56 chr17 4009523 4009649 -85494904 + MER5B DNA MER1_type 5 127 -51 193 335 129 13 chr17 4012868 4013023 -85491530 - MIR SINE MIR -70 192 20 1004 182 9 40 chr17 4014284 4014509 -85490044 - AluJo SINE Alu -94 218 1 203 146 24 0 chr17 4014756 4014797 -85489756 + CT-rich Low_complexity Low_complexity 3 44 0 1134 101 24 0 chr17 4015713 4015881 -85488672 + AluSc SINE Alu 132 303 -6 237 273 114 45 chr17 4015881 4016013 -85488540 - MER112 DNA MER1_type -115 145 5 294 234 183 15 chr17 4016227 4016364 -85488189 + L3 LINE CR1 1346 1505 -72 1781 155 7 0 chr17 4016382 4016672 -85487881 - AluSx SINE Alu -19 293 2 581 265 155 0 chr17 4017099 4017299 -85487254 + MIR SINE MIR 6 236 -26 334 308 67 10 chr17 4017369 4017473 -85487080 + L2 LINE L2 3123 3232 -40 1602 181 0 37 chr17 4017706 4018027 -85486526 + AluSx SINE Alu 1 309 -3 1468 174 31 14 chr17 4018042 4018335 -85486218 - AluJo SINE Alu -14 298 1 678 215 117 27 chr17 4018408 4018631 -85485922 + L1MC5 LINE L1 7688 7930 -31 * 1809 254 53 30 chr17 4018629 4019166 -85485387 + L1PA14 LINE L1 405 928 -5226 1937 83 12 0 chr17 4019166 4019418 -85485135 - AluSc SINE Alu -54 255 1 541 156 37 18 chr17 4019427 4019536 -85485017 - L1MB7 LINE L1 0 6184 6074 1809 254 53 30 chr17 4019536 4019868 -85484685 + L1PA14 LINE L1 935 5780 -374 1579 107 0 0 chr17 4019908 4020124 -85484429 + AluSg SINE Alu 1 216 -94 2509 92 51 0 chr17 4020141 4020512 -85484041 + L1PA14 LINE L1 5769 6158 -3 2067 132 3 0 chr17 4020523 4020834 -85483719 + AluSx SINE Alu 1 312 0 2773 234 88 67 chr17 4020834 4021848 -85482705 + HAL1 LINE L1 1060 2107 -400 1870 155 3 3 chr17 4021848 4022151 -85482402 + AluJb SINE Alu 1 303 -9 2773 234 88 67 chr17 4022151 4022383 -85482170 + HAL1 LINE L1 2107 2333 -174 201 220 0 20 chr17 4022673 4022723 -85481830 - L2 LINE L2 -279 2993 2945 181 260 0 20 chr17 4022740 4022790 -85481763 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4022807 4022857 -85481696 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4022874 4022924 -85481629 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4022941 4022991 -85481562 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4023008 4023058 -85481495 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4023075 4023125 -85481428 - L2 LINE L2 -279 2993 2945 180 260 0 20 chr17 4023142 4023192 -85481361 - L2 LINE L2 -279 2993 2945 180 260 0 20 chr17 4023208 4023258 -85481295 - L2 LINE L2 -279 2993 2945 410 0 20 0 chr17 4025083 4025133 -85479420 + (TG)n Simple_repeat Simple_repeat 2 52 0 247 200 20 0 chr17 4025133 4025183 -85479370 + (CATA)n Simple_repeat Simple_repeat 2 52 0 220 289 141 74 chr17 4025686 4025732 -85478821 - MIR3 SINE MIR -62 146 104 2181 97 3 0 chr17 4025732 4026030 -85478523 + AluSg SINE Alu 3 301 -9 220 289 141 74 chr17 4026030 4026118 -85478435 - MIR3 SINE MIR -104 104 3 22 0 0 0 chr17 4026941 4026963 -85477590 + AT_rich Low_complexity Low_complexity 1 22 0 453 209 40 129 chr17 4027538 4027763 -85476790 - L1MC5 LINE L1 -46 7915 7711 1869 147 7 0 chr17 4027777 4028077 -85476476 - AluJb SINE Alu -10 302 1 832 286 96 49 chr17 4028396 4028935 -85475618 + L1M4 LINE L1 3658 4230 -1916 1202 121 0 0 chr17 4029106 4029280 -85475273 + AluSg/x SINE Alu 136 309 -3 2237 89 0 0 chr17 4029833 4030125 -85474428 + AluSq SINE Alu 1 292 -21 362 316 110 30 chr17 4030872 4031109 -85473444 + L3 LINE CR1 961 1216 -361 1764 170 3 3 chr17 4031647 4031953 -85472600 - AluJb SINE Alu -5 307 2 873 91 83 0 chr17 4032219 4032351 -85472202 + AluSp SINE Alu 1 143 -170 25 0 0 0 chr17 4032351 4032376 -85472177 + AT_rich Low_complexity Low_complexity 1 25 0 1307 76 17 0 chr17 4032379 4032585 -85471968 + AluSp SINE Alu 110 318 0 537 350 137 5 chr17 4032812 4033192 -85471361 - L3 LINE CR1 -344 1233 804 414 282 57 13 chr17 4033550 4033738 -85470815 - MIR SINE MIR -31 231 33 1985 105 0 48 chr17 4033864 4034177 -85470376 + AluSq SINE Alu 4 301 -12 285 304 64 59 chr17 4034981 4035185 -85469368 + L2 LINE L2 3086 3290 -23 1072 167 158 92 chr17 4035206 4035285 -85469268 - MER44D DNA MER2_type -1882 609 537 388 46 0 31 chr17 4035285 4035350 -85469203 + (TA)n Simple_repeat Simple_repeat 2 64 0 1072 167 158 92 chr17 4035350 4035399 -85469154 - MER44D DNA MER2_type -1954 537 493 2274 64 3 3 chr17 4035399 4035695 -85468858 + AluY SINE Alu 1 296 -15 1072 167 158 92 chr17 4035695 4035882 -85468671 - MER44D DNA MER2_type -1998 493 2 2201 84 0 19 chr17 4035933 4036241 -85468312 + AluSp SINE Alu 1 302 -11 1680 149 28 3 chr17 4036601 4036890 -85467663 + AluJb SINE Alu 1 296 -16 1903 124 14 7 chr17 4036985 4037275 -85467278 - AluSx SINE Alu -20 292 1 640 211 0 30 chr17 4037820 4037953 -85466600 - FLAM_C SINE Alu -9 134 6 958 137 0 0 chr17 4038065 4038211 -85466342 + MLT2A2 LTR ERVL 308 453 0 3715 122 14 21 chr17 4038211 4038244 -85466309 + HERVL-A2 LTR ERVL 1 33 -5621 2100 104 0 7 chr17 4038244 4038542 -85466011 - AluSg SINE Alu -14 296 1 3715 122 14 21 chr17 4038542 4039084 -85465469 + HERVL-A2 LTR ERVL 33 572 -5082 11022 107 13 0 chr17 4039086 4040563 -85463990 + HERVL LTR ERVL 2125 3620 -2034 231 260 39 77 chr17 4040577 4040681 -85463872 + MIR SINE MIR 113 212 -50 2334 78 0 7 chr17 4040945 4041253 -85463300 - AluSq SINE Alu -7 306 1 337 286 267 34 chr17 4041809 4042075 -85462478 + L2 LINE L2 2985 3312 -1 595 288 55 66 chr17 4042126 4042296 -85462257 + L1M4 LINE L1 4791 4961 -1185 1915 113 29 0 chr17 4042296 4042571 -85461982 - AluSq SINE Alu -22 291 9 595 288 55 66 chr17 4042571 4042855 -85461698 + L1M4 LINE L1 4961 5240 -906 1983 145 0 0 chr17 4042925 4043236 -85461317 - AluSx SINE Alu -1 311 1 215 235 0 86 chr17 4043252 4043290 -85461263 + MIR SINE MIR 186 215 -47 1813 124 10 29 chr17 4043290 4043596 -85460957 + AluJo SINE Alu 1 300 -12 215 235 0 86 chr17 4043596 4043638 -85460915 + MIR SINE MIR 215 259 -3 431 215 21 0 chr17 4043916 4044009 -85460544 - U13 snRNA snRNA -9 95 1 1544 174 27 14 chr17 4044631 4044925 -85459628 - AluJo SINE Alu -14 298 1 1739 124 84 0 chr17 4044936 4045209 -85459344 - AluSg SINE Alu -14 296 1 1985 141 0 0 chr17 4046175 4046474 -85458079 + AluSx SINE Alu 5 303 -9 261 0 0 0 chr17 4046525 4046554 -85457999 + (TA)n Simple_repeat Simple_repeat 1 29 0 1398 94 5 19 chr17 4046688 4046900 -85457653 + AluSq SINE Alu 94 302 -11 23 0 0 0 chr17 4046948 4046971 -85457582 + AT_rich Low_complexity Low_complexity 1 23 0 2125 112 0 22 chr17 4047551 4047865 -85456688 + AluY SINE Alu 1 307 -4 1500 62 5 0 chr17 4048031 4048223 -85456330 + AluSg/x SINE Alu 96 288 -22 2104 93 0 23 chr17 4048353 4048654 -85455899 + AluSc SINE Alu 5 298 -11 285 238 119 0 chr17 4048993 4049077 -85455476 - MIR SINE MIR -76 186 93 1486 164 0 57 chr17 4049493 4049839 -85454714 - AluJo SINE Alu 0 328 1 1693 141 40 13 chr17 4050004 4050303 -85454250 - AluSx SINE Alu -5 307 1 2032 101 6 19 chr17 4050362 4050679 -85453874 - AluSp SINE Alu 0 313 1 642 287 22 32 chr17 4051070 4051317 -85453236 + MIR SINE MIR 3 256 -6 756 251 0 6 chr17 4051572 4051755 -85452798 - MLT1E2-int LTR MaLR -1157 214 33 1685 231 70 35 chr17 4051796 4052233 -85452320 - MLT1E2 LTR MaLR 0 626 151 776 188 34 40 chr17 4052323 4052499 -85452054 - MLT1E2 LTR MaLR -330 175 1 2298 62 0 3 chr17 4053697 4053988 -85450565 - AluY SINE Alu -17 294 5 272 284 124 47 chr17 4054985 4055154 -85449399 + MIR SINE MIR 3 184 -78 2480 84 3 0 chr17 4055608 4055919 -85448634 - AluSp SINE Alu -1 312 1 192 77 0 0 chr17 4056451 4056477 -85448076 + (TA)n Simple_repeat Simple_repeat 2 27 0 2674 40 3 0 chr17 4056733 4057036 -85447517 - AluY SINE Alu -7 304 1 2138 112 7 0 chr17 4057038 4057332 -85447221 - AluSx SINE Alu -16 296 1 216 0 0 0 chr17 4057949 4057973 -85446580 + (A)n Simple_repeat Simple_repeat 1 24 0 1920 164 0 6 chr17 4058120 4058432 -85446121 + AluJb SINE Alu 1 310 -2 2018 133 7 13 chr17 4059089 4059389 -85445164 + AluJb SINE Alu 1 298 -14 1806 163 10 13 chr17 4059961 4060262 -85444291 + AluJb SINE Alu 1 300 -12 1602 153 24 0 chr17 4060287 4060542 -85444011 - AluJo SINE Alu -24 288 28 2092 138 3 13 chr17 4060781 4061093 -85443460 + AluSx SINE Alu 1 309 -3 2273 107 3 0 chr17 4061306 4061605 -85442948 - AluSp SINE Alu -13 300 1 1811 173 3 7 chr17 4062302 4062603 -85441950 - AluJb SINE Alu 0 312 13 240 289 304 0 chr17 4062628 4062898 -85441655 - L3 LINE CR1 -14 1563 1212 432 0 0 0 chr17 4063260 4063308 -85441245 + (TG)n Simple_repeat Simple_repeat 2 49 0 450 225 47 41 chr17 4064705 4064874 -85439679 - Charlie1 DNA MER1_type 0 2761 2592 189 0 0 0 chr17 4064971 4064992 -85439561 + (A)n Simple_repeat Simple_repeat 1 21 0 1959 131 16 16 chr17 4065042 4065347 -85439206 + AluSq SINE Alu 1 305 -8 249 91 0 0 chr17 4065364 4065397 -85439156 + Alu SINE Alu 1 33 -268 2053 108 9 41 chr17 4065399 4065715 -85438838 + AluSx SINE Alu 7 312 0 2417 78 10 3 chr17 4065724 4066031 -85438522 + AluSq SINE Alu 1 309 -4 1012 164 0 0 chr17 4066039 4066198 -85438355 + FRAM SINE Alu 9 167 -9 244 279 48 30 chr17 4066253 4066418 -85438135 - L1P LINE L1 -3452 2694 2527 332 284 89 64 chr17 4066418 4066587 -85437966 - L1M4 LINE L1 -3623 2523 2345 681 62 42 0 chr17 4066587 4066683 -85437870 - HY3 scRNA scRNA -1 100 1 332 284 89 64 chr17 4066683 4066749 -85437804 - L1M4 LINE L1 -3801 2345 2282 2214 112 7 3 chr17 4068293 4068596 -85435957 - AluSx SINE Alu -8 304 1 467 232 106 53 chr17 4068924 4068990 -85435563 + MER20 DNA MER1_type 2 63 -156 2157 132 0 0 chr17 4068990 4069286 -85435267 - AluSx SINE Alu -10 302 7 467 232 106 53 chr17 4069286 4069426 -85435127 + MER20 DNA MER1_type 63 219 0 1275 131 0 0 chr17 4070558 4070734 -85433819 - AluSp SINE Alu -4 309 134 294 249 69 83 chr17 4071334 4071484 -85433069 + L2 LINE L2 1564 1712 -1602 2286 117 0 0 chr17 4071484 4071792 -85432761 + AluSx SINE Alu 2 309 -3 294 249 69 83 chr17 4071792 4071858 -85432695 + L2 LINE L2 1712 1777 -1537 222 254 16 16 chr17 4071953 4072016 -85432537 - L2 LINE L2 -536 2778 2716 968 141 22 5 chr17 4072254 4072438 -85432115 + L1PB2 LINE L1 5959 6145 -6 217 98 20 39 chr17 4072719 4072770 -85431783 + (GGA)n Simple_repeat Simple_repeat 2 51 0 687 237 63 10 chr17 4072807 4073014 -85431539 + HAL1 LINE L1 2184 2401 -106 572 84 36 0 chr17 4073029 4073112 -85431441 - HY3 scRNA scRNA -2 99 14 26 50 0 0 chr17 4073681 4073721 -85430832 + AT_rich Low_complexity Low_complexity 1 40 0 675 200 0 0 chr17 4073821 4073946 -85430607 + AluJo/FLAM SINE Alu 3 127 -175 2365 88 3 0 chr17 4073948 4074243 -85430310 + AluSg SINE Alu 1 296 -14 2208 110 3 0 chr17 4076332 4076623 -85427930 - AluSq SINE Alu -17 296 5 2352 65 33 26 chr17 4078662 4078969 -85425584 - AluY SINE Alu -2 309 1 2059 137 0 29 chr17 4078990 4079305 -85425248 - AluSx SINE Alu -6 306 1 415 238 32 56 chr17 4079305 4079431 -85425122 + MER5B DNA MER1_type 5 127 -51 2043 168 0 0 chr17 4084090 4084400 -85420153 - AluJb SINE Alu -2 310 1 1585 206 3 19 chr17 4084423 4084733 -85419820 + AluJo SINE Alu 1 305 -7 225 360 26 20 chr17 4085133 4085286 -85419267 - L1MC/D LINE L1 -2164 5644 5491 2525 48 10 0 chr17 4086295 4086590 -85417963 + AluY SINE Alu 1 298 -13 181 274 0 65 chr17 4087443 4087505 -85417048 - MIR SINE MIR -81 181 124 246 276 104 22 chr17 4087855 4087989 -85416564 + MIR SINE MIR 47 191 -71 1771 70 86 150 chr17 4090637 4090964 -85413589 + AluSx SINE Alu 1 306 -6 2071 132 7 3 chr17 4090984 4091280 -85413273 - AluSx SINE Alu -15 297 1 1174 92 92 24 chr17 4095748 4095955 -85408598 - L1PB1 LINE L1 -2 6149 5929 308 321 30 15 chr17 4096540 4096674 -85407879 + MIR SINE MIR 48 183 -79 1507 125 133 26 chr17 4097060 4097324 -85407229 - AluSx SINE Alu -1 311 20 332 308 100 8 chr17 4098148 4098268 -85406285 + L2 LINE L2 3181 3311 -2 2018 128 7 3 chr17 4098567 4098856 -85405697 + AluJb SINE Alu 7 296 -16 259 325 50 17 chr17 4099820 4099940 -85404613 - L2 LINE L2 -217 3055 2932 2094 103 6 91 chr17 4100147 4100487 -85404066 + AluSx SINE Alu 1 311 -1 532 203 23 53 chr17 4103986 4104119 -85400434 - FLAM_A SINE Alu -2 131 3 206 343 40 80 chr17 4104288 4104463 -85400090 + MER5A DNA MER1_type 21 188 -1 212 242 158 32 chr17 4105038 4105133 -85399420 + L2 LINE L2 3204 3310 -3 687 193 0 17 chr17 4105169 4105288 -85399265 - FLAM_A SINE Alu -16 117 1 935 305 90 23 chr17 4105703 4106246 -85398307 + L2 LINE L2 2493 3068 -245 2232 128 0 0 chr17 4106374 4106678 -85397875 + AluSx SINE Alu 2 305 -7 2129 133 0 3 chr17 4107426 4107719 -85396834 - AluSx SINE Alu -11 301 10 2283 118 3 10 chr17 4107734 4108048 -85396505 - AluSx SINE Alu 0 312 1 2019 104 0 4 chr17 4108580 4108848 -85395705 - AluSx SINE Alu -45 267 1 1841 239 47 48 chr17 4109531 4109612 -85394941 + L1M4c LINE L1 2070 2150 -4232 2190 114 0 17 chr17 4109612 4109921 -85394632 + AluSx SINE Alu 1 304 0 1841 239 47 48 chr17 4109921 4109952 -85394601 + L1M4c LINE L1 2150 2180 -4202 1887 158 0 16 chr17 4109952 4110255 -85394298 + AluJo SINE Alu 1 298 -14 1841 239 47 48 chr17 4110255 4110525 -85394028 + L1M4c LINE L1 2180 2449 -3933 2583 60 0 0 chr17 4110525 4110825 -85393728 + AluY SINE Alu 1 300 -11 1841 239 47 48 chr17 4110825 4111184 -85393369 + L1M4c LINE L1 2449 2799 -3583 1525 35 29 0 chr17 4111184 4111358 -85393195 + SVA Other Other 1208 1386 0 1841 239 47 48 chr17 4111358 4111406 -85393147 + L1M4c LINE L1 2799 2846 -3536 461 213 21 0 chr17 4111407 4111501 -85393052 - AluJo SINE Alu -178 134 39 761 188 19 0 chr17 4111510 4111670 -85392883 + L1M4c LINE L1 2836 2998 -3384 728 208 39 0 chr17 4111678 4111808 -85392745 - AluJo SINE Alu -176 136 2 4289 209 37 40 chr17 4111809 4112621 -85391932 + L1M4c LINE L1 2987 3799 -2583 2064 112 0 4 chr17 4112621 4112899 -85391654 + AluSx SINE Alu 27 303 -9 4289 209 37 40 chr17 4112899 4113132 -85391421 + L1M4c LINE L1 3799 4031 -2351 2196 112 14 7 chr17 4113132 4113428 -85391125 - AluSx SINE Alu -14 298 1 4289 209 37 40 chr17 4113428 4113692 -85390861 + L1M4c LINE L1 4031 4294 -2088 761 186 54 143 chr17 4113793 4113968 -85390585 - MLT1F LTR MaLR -224 318 188 1975 162 0 0 chr17 4113968 4114258 -85390295 - AluJo SINE Alu -22 290 1 761 186 54 143 chr17 4114258 4114431 -85390122 - MLT1F LTR MaLR -354 188 1 603 264 16 36 chr17 4114441 4114634 -85389919 + L2 LINE L2 3114 3302 -11 213 39 0 0 chr17 4114669 4114695 -85389858 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1557 170 4 43 chr17 4114767 4115044 -85389509 - AluJb SINE Alu -45 267 2 275 62 0 42 chr17 4115045 4115093 -85389460 + MER65A LTR ERV1 400 445 0 2143 117 0 52 chr17 4115146 4115470 -85389083 + AluSx SINE Alu 1 307 -5 422 131 31 46 chr17 4115470 4115600 -85388953 + GA-rich Low_complexity Low_complexity 1 128 0 390 267 89 5 chr17 4115791 4116007 -85388546 + L1M4 LINE L1 5191 5424 -740 251 175 0 32 chr17 4116023 4116086 -85388467 + GA-rich Low_complexity Low_complexity 3 63 0 2272 104 0 13 chr17 4116128 4116436 -85388117 + AluSx SINE Alu 1 304 -8 2218 96 27 7 chr17 4116713 4117014 -85387539 - AluSx SINE Alu -5 307 1 391 332 156 17 chr17 4117187 4117425 -85387128 + L2 LINE L2 2079 2349 -965 814 190 70 25 chr17 4117426 4117584 -85386969 + FRAM SINE Alu 1 161 -15 516 328 72 39 chr17 4117626 4117695 -85386858 + L2 LINE L2 2376 2441 -873 1851 141 56 0 chr17 4117695 4117979 -85386574 - AluSx SINE Alu -12 300 1 516 328 72 39 chr17 4117979 4117998 -85386555 + L2 LINE L2 2441 2458 -856 2198 113 7 0 chr17 4117998 4118299 -85386254 - AluSx SINE Alu -9 303 1 516 328 72 39 chr17 4118299 4118661 -85385892 + L2 LINE L2 2458 2847 -467 2452 86 3 0 chr17 4118661 4118962 -85385591 - AluSp SINE Alu -11 302 1 516 328 72 39 chr17 4118962 4118994 -85385559 + L2 LINE L2 2847 2876 -438 263 421 64 0 chr17 4119101 4119241 -85385312 + L2 LINE L2 3123 3271 -1 1039 174 0 0 chr17 4119249 4119410 -85385143 - AluSg/x SINE Alu -16 294 134 1743 154 79 101 chr17 4119410 4119844 -85384709 + L1MB7 LINE L1 5674 6116 -68 2514 74 0 0 chr17 4119844 4120141 -85384412 + AluY SINE Alu 1 297 -14 1741 164 14 3 chr17 4120151 4120444 -85384109 + AluSx SINE Alu 13 308 -4 1778 171 31 0 chr17 4120444 4120731 -85383822 + AluJb SINE Alu 1 296 -16 1743 154 79 101 chr17 4120731 4120789 -85383764 + L1MB7 LINE L1 6123 6167 -17 352 221 12 35 chr17 4121095 4121181 -85383372 + MIR SINE MIR 41 124 -84 2463 69 0 0 chr17 4121448 4121739 -85382814 + AluY SINE Alu 1 291 -20 370 100 29 43 chr17 4122023 4122093 -85382460 + L1MB7 LINE L1 5808 5876 -308 2408 80 3 3 chr17 4123038 4123338 -85381215 - AluSq SINE Alu -13 300 1 191 386 29 0 chr17 4125034 4125104 -85379449 - MIR SINE MIR -96 112 41 1227 91 5 32 chr17 4125114 4125301 -85379252 - L1PA11 LINE L1 0 6174 5993 2402 91 0 0 chr17 4125630 4125928 -85378625 + AluSx SINE Alu 1 298 -14 439 356 75 61 chr17 4126230 4126590 -85377963 - L2 LINE L2 -2 3270 2906 1122 254 135 21 chr17 4126617 4127047 -85377506 - MLT1J LTR MaLR -27 484 6 2379 70 13 7 chr17 4129212 4129510 -85375043 - AluY SINE Alu -11 300 1 197 327 0 0 chr17 4129664 4129719 -85374834 + L2 LINE L2 2716 2770 -544 323 331 18 10 chr17 4130250 4130379 -85374174 + MIR SINE MIR 18 141 -67 362 132 0 15 chr17 4130640 4130708 -85373845 + (GGGA)n Simple_repeat Simple_repeat 4 70 0 292 129 0 48 chr17 4130708 4130770 -85373783 + (GGAGAA)n Simple_repeat Simple_repeat 3 61 0 2293 109 0 0 chr17 4131127 4131421 -85373132 + AluSg SINE Alu 1 294 -16 300 270 81 0 chr17 4131507 4131655 -85372898 + L1ME4a LINE L1 5962 6121 0 360 297 12 36 chr17 4132054 4132219 -85372334 + MLT1K LTR MaLR 126 286 -302 494 215 25 0 chr17 4132290 4132411 -85372142 + MLT1K LTR MaLR 462 585 -3 992 193 6 0 chr17 4132897 4133063 -85371490 + FAM SINE Alu 1 167 -8 1000 184 54 97 chr17 4133127 4133317 -85371236 - L1M4 LINE L1 -914 5232 5036 2064 140 0 31 chr17 4133317 4133639 -85370914 - AluSx SINE Alu 0 312 1 1000 184 54 97 chr17 4133639 4133732 -85370821 - L1M4 LINE L1 -1110 5036 4962 2328 118 0 3 chr17 4133732 4134036 -85370517 - AluSx SINE Alu -9 303 1 1000 184 54 97 chr17 4134036 4134082 -85370471 - L1M4 LINE L1 -1184 4962 4916 427 307 101 46 chr17 4134592 4134810 -85369743 + MIR SINE MIR 2 231 -31 229 181 0 113 chr17 4136269 4136446 -85368107 + G-rich Low_complexity Low_complexity 2 158 0 2160 95 0 3 chr17 4136804 4137133 -85367420 + AluSx SINE Alu 1 328 0 1026 108 43 0 chr17 4137814 4137992 -85366561 - AluSp SINE Alu 0 324 141 1684 228 49 48 chr17 4138101 4138627 -85365926 - L1MC4 LINE L1 -276 7766 7240 819 241 66 0 chr17 4138634 4138846 -85365707 - L1MC4 LINE L1 -990 7052 6827 310 155 13 25 chr17 4138866 4138945 -85365608 - AluS SINE Alu -238 65 1 265 265 0 13 chr17 4138945 4139029 -85365524 - L1MC4 LINE L1 -1474 6530 6439 270 268 14 14 chr17 4139900 4139971 -85364582 + L2 LINE L2 3198 3268 -4 2242 103 7 0 chr17 4140449 4140739 -85363814 + AluSg SINE Alu 1 292 -18 281 311 92 0 chr17 4142530 4142649 -85361904 - MER117 DNA MER1_type -22 175 46 1804 177 0 13 chr17 4142756 4143055 -85361498 - AluJb SINE Alu -17 295 1 1758 180 9 25 chr17 4143114 4143431 -85361122 - AluJb SINE Alu 0 312 1 27 29 0 0 chr17 4143770 4143804 -85360749 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr17 4143892 4143913 -85360640 + AT_rich Low_complexity Low_complexity 1 21 0 2157 117 3 13 chr17 4144761 4145070 -85359483 + AluSx SINE Alu 1 306 -6 2003 93 0 0 chr17 4145826 4146083 -85358470 - AluY SINE Alu 0 311 55 2463 93 0 0 chr17 4146845 4147147 -85357406 + AluSq SINE Alu 1 302 -11 1790 169 23 13 chr17 4147169 4147477 -85357076 + AluJo SINE Alu 1 311 -1 1030 212 73 38 chr17 4148156 4148232 -85356321 - LTR37A LTR ERV1 0 426 354 1548 174 22 73 chr17 4148232 4148251 -85356302 - AluJb SINE Alu -11 301 283 201 74 0 0 chr17 4148251 4148278 -85356275 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 1548 174 22 73 chr17 4148278 4148428 -85356125 - AluJb SINE Alu -29 283 153 2210 102 3 16 chr17 4148428 4148731 -85355822 - AluSx SINE Alu -9 303 5 1548 174 22 73 chr17 4148731 4148877 -85355676 - AluJb SINE Alu -159 153 1 1030 212 73 38 chr17 4148877 4149168 -85355385 - LTR37A LTR ERV1 -72 354 46 222 37 0 0 chr17 4149186 4149213 -85355340 + (T)n Simple_repeat Simple_repeat 1 27 0 2445 70 30 0 chr17 4149409 4149711 -85354842 - AluY SINE Alu 0 311 1 1136 138 10 20 chr17 4150126 4150329 -85354224 - L1MA2 LINE L1 0 6304 6104 223 352 33 0 chr17 4150416 4150507 -85354046 - L2 LINE L2 -6 3266 3173 1073 318 92 53 chr17 4151186 4152242 -85352311 - L2 LINE L2 0 3272 2163 1802 163 7 29 chr17 4152242 4152549 -85352004 + AluJb SINE Alu 1 300 -12 1073 318 92 53 chr17 4152549 4152813 -85351740 - L2 LINE L2 -1109 2163 1911 485 260 180 0 chr17 4152985 4153135 -85351418 - MER5A DNA MER1_type 0 189 13 251 330 53 0 chr17 4153178 4153272 -85351281 - L3 LINE CR1 -67 1510 1412 471 289 162 29 chr17 4153400 4153708 -85350845 - L3 LINE CR1 -555 1022 674 2163 107 0 32 chr17 4154083 4154391 -85350162 + AluSx SINE Alu 2 299 -13 2444 91 3 0 chr17 4154722 4155030 -85349523 - AluSp SINE Alu -4 309 1 2060 136 20 3 chr17 4155030 4155324 -85349229 - AluSx SINE Alu -12 300 2 186 311 107 80 chr17 4156212 4156437 -85348116 - L2 LINE L2 -97 3175 2945 1153 60 0 0 chr17 4156555 4156689 -85347864 - AluSq/x SINE Alu -178 134 1 216 271 19 84 chr17 4156722 4156829 -85347724 - MIR3 SINE MIR -1 207 108 2490 78 3 0 chr17 4157515 4157821 -85346732 + AluSp SINE Alu 1 307 -6 280 93 19 19 chr17 4157831 4157885 -85346668 + L1MB7 LINE L1 6130 6183 -1 1801 102 0 38 chr17 4157895 4158159 -85346394 + AluSx SINE Alu 58 311 -1 312 207 35 0 chr17 4158212 4158270 -85346283 + AluS SINE Alu 2 61 -241 2332 90 3 3 chr17 4158535 4158835 -85345718 - AluSx SINE Alu -12 300 1 2072 122 0 0 chr17 4158853 4159160 -85345393 - AluSx SINE Alu 0 309 3 625 256 84 0 chr17 4159540 4159731 -85344822 - MIR SINE MIR 0 262 56 2313 92 20 3 chr17 4159740 4160044 -85344509 - AluY SINE Alu -2 309 1 670 177 15 23 chr17 4160044 4160174 -85344379 - FLAM_A SINE Alu -4 129 1 219 158 0 0 chr17 4160175 4160213 -85344340 - MIR SINE MIR -71 191 154 283 85 0 0 chr17 4160321 4160368 -85344185 + Alu SINE Alu 262 308 0 2197 65 41 31 chr17 4160409 4160703 -85343850 - AluY SINE Alu -6 305 9 884 195 227 35 chr17 4161311 4161567 -85342986 + AluSx SINE Alu 1 305 -7 1405 181 89 14 chr17 4161571 4161678 -85342875 + AluJb SINE Alu 1 99 -213 2235 117 0 0 chr17 4161678 4161976 -85342577 + AluSq SINE Alu 3 300 -13 1405 181 89 14 chr17 4161976 4162150 -85342403 + AluJb SINE Alu 99 303 -9 1703 163 46 0 chr17 4163115 4163397 -85341156 - AluJo SINE Alu -17 295 1 355 273 40 66 chr17 4163475 4163673 -85340880 - HAL1b LINE L1 -916 432 240 260 278 204 6 chr17 4164217 4164379 -85340174 - MLT1K LTR MaLR -17 571 378 335 167 0 39 chr17 4164715 4164793 -85339760 + L1ME4a LINE L1 6046 6120 -1 2216 100 10 3 chr17 4164840 4165139 -85339414 + AluSx SINE Alu 1 301 -11 2321 62 10 10 chr17 4167100 4167388 -85337165 + AluSg SINE Alu 1 288 -22 336 227 106 63 chr17 4167460 4167520 -85337033 + L1MC/D LINE L1 5198 5254 -984 1901 158 7 3 chr17 4167520 4167817 -85336736 - AluJb SINE Alu -14 298 1 336 227 106 63 chr17 4167817 4168007 -85336546 + L1MC/D LINE L1 5254 5472 -766 1527 153 3 130 chr17 4168298 4168433 -85336120 + AluJb SINE Alu 1 151 -161 512 103 11 0 chr17 4168433 4168520 -85336033 + L1PB1 LINE L1 6063 6150 -1 1527 153 3 130 chr17 4168520 4168731 -85335822 + AluJb SINE Alu 151 303 -9 239 148 37 19 chr17 4168768 4168822 -85335731 + (CATA)n Simple_repeat Simple_repeat 2 56 0 719 224 46 0 chr17 4169145 4169319 -85335234 + MER5A DNA MER1_type 2 183 -6 189 107 0 0 chr17 4169546 4169574 -85334979 + (A)n Simple_repeat Simple_repeat 1 28 0 2265 97 0 10 chr17 4169659 4169958 -85334595 - AluSq SINE Alu -17 296 1 1642 212 13 0 chr17 4171043 4171345 -85333208 - AluJb SINE Alu -6 306 1 2081 135 7 0 chr17 4171453 4171750 -85332803 - AluSx SINE Alu -13 299 1 399 230 0 11 chr17 4172255 4172342 -85332211 - MIR SINE MIR -175 87 2 2627 208 73 66 chr17 4172371 4172492 -85332061 - L1ME1 LINE L1 -8 6092 5973 2291 120 3 3 chr17 4172492 4172801 -85331752 + AluSx SINE Alu 2 310 -2 2627 208 73 66 chr17 4172801 4173577 -85330976 - L1ME1 LINE L1 -127 5973 5188 1910 239 131 23 chr17 4173586 4174446 -85330107 - L1ME1 LINE L1 -2045 4035 3083 1294 98 0 6 chr17 4174446 4174619 -85329934 - AluSg/x SINE Alu -11 299 128 345 220 184 48 chr17 4174619 4174787 -85329766 - L1ME1 LINE L1 -2993 3087 2897 862 175 6 38 chr17 4174789 4174949 -85329604 - AluJo SINE Alu -138 174 20 497 218 77 12 chr17 4174970 4175140 -85329413 - L1ME1 LINE L1 -3570 2510 2330 1678 174 14 7 chr17 4175147 4175435 -85329118 + AluJb SINE Alu 2 291 -21 369 243 26 53 chr17 4175490 4175642 -85328911 - L1ME1 LINE L1 -5882 188 41 2123 123 0 3 chr17 4175841 4176134 -85328419 - AluSx SINE Alu -20 292 1 21 0 0 0 chr17 4176141 4176162 -85328391 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 4176243 4176266 -85328287 + AT_rich Low_complexity Low_complexity 1 23 0 1847 58 9 0 chr17 4176767 4176991 -85327562 + AluY SINE Alu 82 307 -4 650 234 96 59 chr17 4178013 4178316 -85326237 - L1MC5 LINE L1 -47 7914 7601 1662 229 112 74 chr17 4178353 4179255 -85325298 - L1MC5 LINE L1 -471 7490 6542 204 382 88 23 chr17 4180249 4180572 -85323981 + L2 LINE L2 1700 2071 -1243 2323 39 0 0 chr17 4180572 4180832 -85323721 - AluY SINE Alu -11 300 41 204 382 88 23 chr17 4180832 4181032 -85323521 + L2 LINE L2 2071 2257 -1057 2016 94 56 3 chr17 4181032 4181320 -85323233 - AluSq SINE Alu -8 305 3 1995 188 105 20 chr17 4181519 4182015 -85322538 - L1MB7 LINE L1 -56 6128 5591 1386 167 0 70 chr17 4182049 4182336 -85322217 - AluJo SINE Alu -23 289 23 2028 87 38 11 chr17 4182643 4182930 -85321623 - AluSg1 SINE Alu -10 299 5 498 33 0 0 chr17 4183006 4183066 -85321487 + (TA)n Simple_repeat Simple_repeat 2 61 0 1364 198 32 12 chr17 4183068 4183321 -85321232 - AluJo SINE Alu -31 281 24 294 179 32 0 chr17 4183322 4183417 -85321136 + (TA)n Simple_repeat Simple_repeat 2 99 0 2102 129 3 3 chr17 4183418 4183721 -85320832 - AluSg SINE Alu -7 303 1 231 306 24 0 chr17 4183762 4183847 -85320706 - L1ME4a LINE L1 -67 6054 5968 204 135 0 0 chr17 4183849 4183886 -85320667 + (TG)n Simple_repeat Simple_repeat 1 37 0 333 182 0 80 chr17 4184066 4184087 -85320466 - L1ME4a LINE L1 -327 5794 5773 2342 86 7 13 chr17 4184087 4184390 -85320163 + AluSx SINE Alu 1 301 -11 333 182 0 80 chr17 4184390 4184456 -85320097 - L1ME4a LINE L1 -348 5773 5714 230 315 177 35 chr17 4186622 4187159 -85317394 + L2 LINE L2 2248 2860 -454 2137 104 3 7 chr17 4187912 4188211 -85316342 + AluY SINE Alu 1 298 -13 985 185 45 15 chr17 4188278 4188478 -85316075 + MER3 DNA MER1_type 1 206 -3 376 250 121 0 chr17 4188824 4188948 -85315605 - MIR SINE MIR -112 150 12 2197 103 20 3 chr17 4188950 4189252 -85315301 - AluSx SINE Alu -5 307 1 425 186 23 12 chr17 4189455 4189541 -85315012 - L2 LINE L2 -43 3270 3184 * 508 304 62 41 chr17 4189533 4189930 -85314623 - L2 LINE L2 -258 3055 2653 1957 160 3 7 chr17 4190005 4190312 -85314241 + AluJb SINE Alu 1 306 -6 21 0 0 0 chr17 4190617 4190638 -85313915 + AT_rich Low_complexity Low_complexity 1 21 0 1885 136 39 0 chr17 4190877 4191157 -85313396 + AluSx SINE Alu 1 291 -21 683 171 0 8 chr17 4191715 4191832 -85312721 + AluJo/FLAM SINE Alu 2 117 -195 539 158 158 36 chr17 4191827 4191966 -85312587 - AluSg/x SINE Alu -16 294 139 * 1717 154 0 0 chr17 4191973 4192232 -85312321 - AluSx SINE Alu -53 259 1 1104 123 0 0 chr17 4192266 4192421 -85312132 + AluJb SINE Alu 132 286 -26 219 88 0 0 chr17 4193134 4193168 -85311385 + (CACCC)n Simple_repeat Simple_repeat 3 36 0 2517 74 0 0 chr17 4194594 4194893 -85309660 + AluSx SINE Alu 1 299 -13 229 299 19 37 chr17 4194984 4195091 -85309462 - L2 LINE L2 -2673 641 537 793 172 31 0 chr17 4195107 4195235 -85309318 - FLAM_C SINE Alu -1 132 1 843 185 5 43 chr17 4195373 4195557 -85308996 + FRAM SINE Alu 1 172 -4 230 176 59 0 chr17 4196107 4196158 -85308395 + L2 LINE L2 3209 3262 -10 337 234 47 55 chr17 4196180 4196308 -85308245 + MIR3 SINE MIR 33 159 -49 2469 63 3 22 chr17 4196582 4196898 -85307655 - AluSg SINE Alu 0 310 1 191 257 124 9 chr17 4197359 4197464 -85307089 + MIR SINE MIR 16 132 -130 1212 108 11 17 chr17 4200069 4200245 -85304308 + FRAM SINE Alu 1 171 -5 859 201 39 44 chr17 4202316 4202520 -85302033 - MER3 DNA MER1_type -5 204 2 251 167 83 69 chr17 4202857 4202929 -85301624 - MIR SINE MIR -31 231 159 1641 176 27 10 chr17 4203016 4203311 -85301242 - AluJo SINE Alu -10 302 3 1703 58 24 0 chr17 4203663 4203871 -85300682 - AluY SINE Alu -19 292 80 2608 50 0 0 chr17 4203871 4204167 -85300386 - AluY SINE Alu -14 297 1 1223 183 114 19 chr17 4204441 4204704 -85299849 + AluJo SINE Alu 1 288 -24 376 88 0 18 chr17 4204728 4204785 -85299768 + Alu SINE Alu 238 293 -8 1420 124 139 23 chr17 4205870 4206129 -85298424 - AluSg SINE Alu -21 289 1 445 288 158 28 chr17 4206379 4206604 -85297949 - LTR16A LTR ERVL 0 457 201 795 196 266 32 chr17 4206749 4207061 -85297492 + MLT1F1 LTR MaLR 183 567 0 1799 128 60 0 chr17 4207588 4207870 -85296683 - AluSx SINE Alu -13 299 1 1360 128 50 5 chr17 4208004 4208222 -85296331 + MER30 DNA MER1_type 1 228 -2 2209 113 3 3 chr17 4208663 4208963 -85295590 + AluSq SINE Alu 1 300 -13 277 235 78 72 chr17 4209037 4209190 -85295363 + L1 LINE L1 4882 5035 -1111 874 168 7 7 chr17 4209299 4209454 -85295099 + AluSg/x SINE Alu 135 289 -21 369 0 0 0 chr17 4209456 4209497 -85295056 + (TA)n Simple_repeat Simple_repeat 2 42 0 2003 141 3 7 chr17 4209674 4209971 -85294582 - AluSx SINE Alu -14 298 3 1818 161 43 7 chr17 4209973 4210272 -85294281 - AluSx SINE Alu -2 310 1 2236 86 21 3 chr17 4210279 4210569 -85293984 - AluSq SINE Alu -18 295 1 400 251 104 32 chr17 4210575 4210960 -85293593 + L1ME3A LINE L1 5521 5940 -230 522 69 14 0 chr17 4211409 4211481 -85293072 - U3 snRNA snRNA -144 73 1 2235 128 0 0 chr17 4211707 4212019 -85292534 - AluSx SINE Alu 0 312 1 1816 134 40 0 chr17 4212867 4213143 -85291410 + AluSg SINE Alu 1 287 -23 254 319 11 0 chr17 4213330 4213421 -85291132 + GA-rich Low_complexity Low_complexity 4 95 0 2144 114 0 20 chr17 4213505 4213811 -85290742 + AluSx SINE Alu 1 300 -12 26 30 0 0 chr17 4213892 4213925 -85290628 + AT_rich Low_complexity Low_complexity 1 33 0 2251 128 0 7 chr17 4213953 4214257 -85290296 + AluSx SINE Alu 1 302 -10 2289 121 0 6 chr17 4214605 4214918 -85289635 + AluSx SINE Alu 1 311 -1 1833 171 13 10 chr17 4215092 4215432 -85289121 - AluJo SINE Alu 0 341 1 388 289 139 66 chr17 4215518 4215958 -85288595 + HAL1 LINE L1 1394 1875 -632 2305 98 0 3 chr17 4215958 4216254 -85288299 + AluSc SINE Alu 1 295 -14 388 289 139 66 chr17 4216254 4216301 -85288252 + HAL1 LINE L1 1875 1917 -590 2345 107 0 0 chr17 4216413 4216713 -85287840 + AluSx SINE Alu 3 302 -10 1253 134 0 21 chr17 4217048 4217235 -85287318 + AluSx SINE Alu 1 183 -129 260 266 46 29 chr17 4217254 4217427 -85287126 + C-rich Low_complexity Low_complexity 3 178 0 180 228 0 0 chr17 4217465 4217522 -85287031 + C-rich Low_complexity Low_complexity 1 57 0 194 224 0 26 chr17 4217586 4217662 -85286891 + C-rich Low_complexity Low_complexity 3 76 0 397 306 0 0 chr17 4217962 4218086 -85286467 + G-rich Low_complexity Low_complexity 1 124 0 384 249 0 0 chr17 4218098 4218263 -85286290 + G-rich Low_complexity Low_complexity 1 165 0 351 167 0 0 chr17 4218297 4218387 -85286166 + G-rich Low_complexity Low_complexity 1 90 0 1458 98 0 0 chr17 4218427 4218611 -85285942 + AluSg/x SINE Alu 116 299 -13 22 0 0 0 chr17 4218709 4218731 -85285822 + AT_rich Low_complexity Low_complexity 1 22 0 1118 208 64 13 chr17 4218916 4219152 -85285401 - MLT1F1 LTR MaLR -307 260 13 615 248 30 0 chr17 4219192 4219325 -85285228 - MER119 DNA MER1_type -391 192 56 421 167 175 0 chr17 4219811 4219925 -85284628 - L1MA9 LINE L1 -10 6302 6169 1437 204 87 63 chr17 4219967 4220384 -85284169 - L1MC4a LINE L1 0 7808 7377 1748 175 24 0 chr17 4220384 4220675 -85283878 + AluJo SINE Alu 1 298 -14 1437 204 87 63 chr17 4220675 4220718 -85283835 - L1MC4a LINE L1 -431 7377 7337 1810 174 26 10 chr17 4220830 4221134 -85283419 + AluJb SINE Alu 1 309 -3 220 295 77 0 chr17 4221186 4221264 -85283289 + L2 LINE L2 3191 3274 -39 199 396 20 41 chr17 4222791 4222988 -85281565 + L2 LINE L2 2992 3184 -88 1686 141 46 89 chr17 4223093 4223440 -85281113 + MER7A DNA MER2_type 1 330 -16 1615 167 33 46 chr17 4223673 4223979 -85280574 - AluJo SINE Alu -10 302 1 478 239 23 6 chr17 4223986 4224114 -85280439 - L1MA9 LINE L1 0 6291 6167 2329 108 7 0 chr17 4224231 4224536 -85280017 + AluSx SINE Alu 1 307 -5 2134 122 7 0 chr17 4226028 4226323 -85278230 + AluSg SINE Alu 1 297 -13 26 30 0 0 chr17 4226657 4226690 -85277863 + AT_rich Low_complexity Low_complexity 1 33 0 627 104 144 80 chr17 4227215 4227340 -85277213 + FLAM_C SINE Alu 1 133 0 2053 116 37 7 chr17 4227642 4227936 -85276617 - AluSp SINE Alu -10 303 1 2082 125 7 0 chr17 4227939 4228228 -85276325 - AluSx SINE Alu -21 291 1 1978 111 17 10 chr17 4228719 4229007 -85275546 - AluSg SINE Alu -20 290 1 441 270 146 74 chr17 4229382 4229815 -85274738 + L1MC4 LINE L1 7579 8042 0 1944 72 0 0 chr17 4229895 4230131 -85274422 - AluY SINE Alu -75 236 1 303 242 53 45 chr17 4230134 4230266 -85274287 - L1M1 LINE L1 -4139 3426 3294 938 149 24 0 chr17 4230326 4230494 -85274059 + L1MA8 LINE L1 6092 6263 -28 938 189 12 0 chr17 4230496 4230660 -85273893 + FRAM SINE Alu 1 163 -13 285 183 0 0 chr17 4230710 4230770 -85273783 + (CATA)n Simple_repeat Simple_repeat 2 61 0 1628 182 0 30 chr17 4232089 4232386 -85272167 - AluJb SINE Alu -24 288 1 334 148 0 33 chr17 4232388 4232449 -85272104 - FLAM_A SINE Alu 0 133 75 282 253 32 32 chr17 4232479 4232574 -85271979 - L2 LINE L2 -11 3302 3208 2138 117 7 0 chr17 4232684 4232982 -85271571 + AluSx SINE Alu 1 300 -12 190 176 40 135 chr17 4233340 4233382 -85271171 - L2 LINE L2 -60 3253 3219 2146 124 0 0 chr17 4233382 4233680 -85270873 + AluY SINE Alu 1 298 -13 190 176 40 135 chr17 4233680 4233711 -85270842 - L2 LINE L2 -94 3219 3187 723 162 0 63 chr17 4234185 4234327 -85270226 + FLAM_C SINE Alu 1 133 0 2136 104 0 4 chr17 4234626 4234940 -85269613 - AluSc SINE Alu 0 313 1 670 177 15 23 chr17 4234940 4235070 -85269483 - FLAM_A SINE Alu -4 129 1 596 258 16 27 chr17 4235071 4235257 -85269296 - MIR SINE MIR -71 191 8 2183 134 0 0 chr17 4235507 4235805 -85268748 - AluSx SINE Alu -14 298 1 25 0 0 0 chr17 4235824 4235849 -85268704 + AT_rich Low_complexity Low_complexity 1 25 0 1321 182 22 85 chr17 4236760 4237078 -85267475 - AluJo SINE Alu -14 298 1 488 179 8 60 chr17 4237083 4237200 -85267353 - FLAM_A SINE Alu -13 129 19 931 114 0 8 chr17 4237204 4237336 -85267217 + AluJb SINE Alu 171 301 -11 2050 133 13 0 chr17 4237341 4237643 -85266910 + AluSg SINE Alu 1 306 -4 1979 137 3 13 chr17 4238404 4238717 -85265836 + AluJb SINE Alu 1 310 -2 200 318 123 26 chr17 4238738 4238933 -85265620 + L2 LINE L2 2083 2296 -1018 310 291 250 15 chr17 4239311 4239507 -85265046 + MIR SINE MIR 21 262 0 677 228 59 41 chr17 4239578 4239724 -85264829 + MIR SINE MIR 21 174 -88 2235 129 0 15 chr17 4239724 4240066 -85264487 + MER1B DNA MER1_type 1 337 0 677 228 59 41 chr17 4240066 4240138 -85264415 + MIR SINE MIR 174 243 -19 307 54 0 0 chr17 4240250 4240287 -85264266 + AluSp SINE Alu 132 168 -135 421 123 0 0 chr17 4240287 4240344 -85264209 + AluS SINE Alu 230 286 -24 1061 146 113 17 chr17 4240736 4240975 -85263578 - MER58B DNA MER1_type 0 341 80 225 232 24 110 chr17 4241017 4241099 -85263454 - MER58B DNA MER1_type -251 90 16 1060 186 15 51 chr17 4241973 4242247 -85262306 + L1ME1 LINE L1 4382 4645 -1501 1393 163 135 0 chr17 4242247 4242492 -85262061 - AluJo SINE Alu -17 295 18 1079 233 103 21 chr17 4242505 4242883 -85261670 + L1ME1 LINE L1 4634 5042 -1104 878 136 45 32 chr17 4242892 4243047 -85261506 + FAM SINE Alu 1 46 -3 3204 191 104 46 chr17 4243092 4243347 -85261206 + L1ME1 LINE L1 4980 5219 -947 2122 111 4 0 chr17 4243347 4243627 -85260926 + AluSx SINE Alu 21 301 -11 3204 191 104 46 chr17 4243627 4243859 -85260694 + L1ME1 LINE L1 5219 5436 -730 1610 172 62 10 chr17 4243859 4244150 -85260403 + AluJo SINE Alu 1 306 -6 3204 191 104 46 chr17 4244150 4244569 -85259984 + L1ME1 LINE L1 5436 5963 -203 1787 84 0 4 chr17 4244569 4244818 -85259735 + AluSx SINE Alu 58 305 0 3204 191 104 46 chr17 4244818 4245030 -85259523 + L1ME1 LINE L1 5963 6161 -5 1249 217 75 65 chr17 4245430 4245598 -85258955 + MLT1D LTR MaLR 3 168 -337 2461 81 3 0 chr17 4245598 4245906 -85258647 + AluY SINE Alu 1 309 -2 1249 217 75 65 chr17 4245906 4246231 -85258322 + MLT1D LTR MaLR 168 501 -4 210 321 0 0 chr17 4246482 4246535 -85258018 - MIR SINE MIR -155 107 55 2057 116 7 14 chr17 4246830 4247123 -85257430 - AluSq SINE Alu -22 291 1 2379 99 0 3 chr17 4247386 4247689 -85256864 - AluSg SINE Alu -8 302 1 261 191 48 16 chr17 4247833 4247896 -85256657 - L1ME LINE L1 -557 5564 5500 2111 46 81 0 chr17 4248213 4248473 -85256080 + AluSx SINE Alu 21 301 -11 3448 169 23 73 chr17 4249096 4249881 -85254672 - L1MB8 LINE L1 -5 6173 5428 2356 100 3 0 chr17 4250274 4250613 -85253940 + AluSx SINE Alu 1 340 0 1780 142 46 14 chr17 4250769 4251051 -85253502 + AluJb SINE Alu 1 291 -21 351 202 0 0 chr17 4251075 4251159 -85253394 + GA-rich Low_complexity Low_complexity 3 86 0 202 265 0 20 chr17 4251190 4251239 -85253314 - MIR SINE MIR -164 98 51 805 248 48 41 chr17 4251239 4251509 -85253044 + HsTC2c DNA Tc2 457 728 -1 437 175 38 0 chr17 4251925 4252005 -85252548 - LTR32 LTR ERVL -77 394 312 1964 134 31 0 chr17 4252402 4252693 -85251860 - AluSx SINE Alu -12 300 1 218 304 0 0 chr17 4253209 4253278 -85251275 + L2 LINE L2 2712 2780 -534 354 231 51 0 chr17 4253528 4253606 -85250947 + MER3 DNA MER1_type 1 82 -127 223 315 176 13 chr17 4253769 4254007 -85250546 + L2 LINE L2 2921 3197 -116 249 273 87 33 chr17 4254065 4254248 -85250305 - L2 LINE L2 -1 3312 3120 640 183 95 53 chr17 4254318 4254487 -85250066 + FRAM SINE Alu 1 40 0 236 262 182 27 chr17 4255191 4255378 -85249175 - MER112 DNA MER1_type -42 218 3 1122 162 0 0 chr17 4255381 4255554 -85248999 + AluSg/x SINE Alu 126 298 -14 1928 99 4 11 chr17 4255952 4256224 -85248329 - AluSg SINE Alu 0 310 41 2226 123 0 0 chr17 4256400 4256709 -85247844 + AluSx SINE Alu 1 309 -3 1719 105 9 4 chr17 4256822 4257051 -85247502 + AluSq SINE Alu 1 230 -83 346 257 50 30 chr17 4259631 4259732 -85244821 - MIR SINE MIR -155 107 5 1341 177 117 11 chr17 4260165 4260431 -85244122 - AluJb SINE Alu -14 298 5 1919 96 82 11 chr17 4261093 4261373 -85243180 - AluSp SINE Alu -13 300 1 2352 88 3 0 chr17 4261684 4261981 -85242572 - AluSx SINE Alu -14 298 1 1636 101 9 9 chr17 4262409 4262628 -85241925 - AluSq SINE Alu -94 219 1 2299 110 0 0 chr17 4262790 4263089 -85241464 - AluSg SINE Alu -11 299 1 282 255 158 9 chr17 4263512 4263656 -85240897 - MER5A DNA MER1_type -16 162 8 366 162 0 0 chr17 4264143 4264211 -85240342 - L1MA10 LINE L1 -2 6332 6265 2234 101 3 0 chr17 4264211 4264499 -85240054 + AluSp SINE Alu 1 289 -24 1188 155 0 0 chr17 4264504 4264678 -85239875 + AluSg/x SINE Alu 123 296 -16 2016 147 3 3 chr17 4265116 4265416 -85239137 + AluSx SINE Alu 1 300 -12 192 336 75 94 chr17 4266644 4266909 -85237644 - L2 LINE L2 -417 2897 2638 3369 188 26 39 chr17 4317421 4317542 -85187011 - L1MB7 LINE L1 -8 6176 6055 2255 114 0 0 chr17 4317542 4317840 -85186713 + AluSx SINE Alu 1 298 -14 3369 188 26 39 chr17 4317840 4318020 -85186533 - L1MB7 LINE L1 -129 6055 5874 2274 107 7 0 chr17 4318020 4318318 -85186235 + AluSx SINE Alu 1 300 -12 3369 188 26 39 chr17 4318318 4318818 -85185735 - L1MB7 LINE L1 -310 5874 5384 2179 90 0 17 chr17 4318837 4319127 -85185426 + AluSg1 SINE Alu 1 285 -24 1817 125 23 15 chr17 4319272 4319536 -85185017 - AluJb SINE Alu -46 266 1 297 217 56 133 chr17 4319796 4319917 -85184636 + MER58C DNA MER1_type 1 111 -104 2510 77 3 0 chr17 4319917 4320228 -85184325 + AluSp SINE Alu 1 312 -1 297 217 56 133 chr17 4320228 4320249 -85184304 + MER58C DNA MER1_type 111 132 -83 274 137 27 41 chr17 4321492 4321565 -85182988 + (CGGGG)n Simple_repeat Simple_repeat 2 73 0 343 308 34 0 chr17 4322126 4322243 -85182310 - MIR SINE MIR -1 261 141 1736 118 77 83 chr17 4322243 4322556 -85181997 - AluSx SINE Alu -1 311 1 801 185 7 0 chr17 4322557 4322692 -85181861 - AluSq/x SINE Alu -177 136 1 342 309 12 0 chr17 4322692 4322776 -85181777 - MIR SINE MIR -115 147 63 1584 96 9 9 chr17 4323278 4323507 -85181046 - AluSq SINE Alu -84 229 1 31 0 0 0 chr17 4325690 4325721 -85178832 + GC_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr17 4326178 4326200 -85178353 + GC_rich Low_complexity Low_complexity 1 22 0 945 137 37 19 chr17 4326635 4326796 -85177757 - AluJo SINE Alu -41 271 108 2330 92 3 0 chr17 4326805 4327108 -85177445 + AluSx SINE Alu 5 308 -4 1314 85 11 26 chr17 4327110 4327299 -85177254 + AluY SINE Alu 126 311 0 1135 116 18 0 chr17 4327562 4327726 -85176827 - AluSq SINE Alu -68 245 79 853 193 0 0 chr17 4328306 4328446 -85176107 - FLAM_C SINE Alu -3 140 1 2240 89 7 7 chr17 4328644 4328958 -85175595 - AluSp SINE Alu 0 314 1 2242 124 7 0 chr17 4329232 4329530 -85175023 - AluSx SINE Alu -12 300 1 667 169 0 17 chr17 4329621 4329739 -85174814 + FLAM_C SINE Alu 2 117 -26 2553 57 0 0 chr17 4329852 4330148 -85174405 - AluY SINE Alu -15 296 1 720 165 0 0 chr17 4330412 4330527 -85174026 - AluSc SINE Alu -52 257 143 1414 264 41 2 chr17 4330673 4331109 -85173444 + L2 LINE L2 2262 2714 -600 633 197 39 0 chr17 4331109 4331236 -85173317 + FLAM_C SINE Alu 2 133 0 2119 209 43 16 chr17 4331236 4331863 -85172690 + L1M4 LINE L1 3126 3769 -2377 2174 82 0 38 chr17 4331865 4332336 -85172217 + AluY SINE Alu 1 460 0 480 164 27 0 chr17 4332351 4332461 -85172092 + GA-rich Low_complexity Low_complexity 1 113 0 1393 115 6 0 chr17 4332591 4332774 -85171779 - AluSx SINE Alu -128 184 1 2233 103 3 3 chr17 4332774 4333076 -85171477 - AluSx SINE Alu -5 307 6 1895 132 24 14 chr17 4333083 4333379 -85171174 - AluSx SINE Alu -13 299 1 397 281 150 22 chr17 4333382 4333695 -85170858 + L2 LINE L2 524 876 -2438 2208 114 0 26 chr17 4333695 4334001 -85170552 - AluSg SINE Alu -7 303 6 2282 106 6 3 chr17 4334028 4334340 -85170213 - AluSq SINE Alu 0 313 1 2223 83 30 17 chr17 4334495 4334795 -85169758 + AluSc SINE Alu 1 304 -5 192 40 0 0 chr17 4335336 4335361 -85169192 + (TAA)n Simple_repeat Simple_repeat 1 25 0 1162 106 5 96 chr17 4335509 4335735 -85168818 + AluSg/x SINE Alu 117 324 0 234 128 0 0 chr17 4335983 4336022 -85168531 + (CTCA)n Simple_repeat Simple_repeat 1 39 0 1306 88 0 0 chr17 4336035 4336205 -85168348 + AluSg/x SINE Alu 135 304 -6 186 362 39 16 chr17 4336241 4336368 -85168185 - L2 LINE L2 -2 3311 3182 766 181 44 111 chr17 4336620 4336890 -85167663 + AluJb SINE Alu 61 312 0 1381 105 0 0 chr17 4337669 4337841 -85166712 + AluSq SINE Alu 36 207 -106 1913 137 26 7 chr17 4338961 4339267 -85165286 + AluSq SINE Alu 1 312 -1 788 103 26 0 chr17 4339521 4339637 -85164916 - LTR8 LTR ERV1 0 691 573 2030 125 26 20 chr17 4339637 4339941 -85164612 - AluSq SINE Alu -6 307 2 1228 206 112 55 chr17 4339983 4340035 -85164518 + MLT1D LTR MaLR 1 49 -456 3156 135 6 21 chr17 4340035 4340570 -85163983 + MER1A DNA MER1_type 1 527 0 1228 206 112 55 chr17 4340570 4340919 -85163634 + MLT1D LTR MaLR 49 425 -80 2231 99 6 29 chr17 4340949 4341263 -85163290 - AluSq SINE Alu -6 307 1 2207 116 0 13 chr17 4341301 4341603 -85162950 - AluSx SINE Alu -14 298 1 1576 157 74 68 chr17 4341674 4341718 -85162835 + MSTD LTR MaLR 1 43 -353 2337 114 0 0 chr17 4341718 4342017 -85162536 - AluSq SINE Alu -12 301 3 1576 157 74 68 chr17 4342017 4342366 -85162187 + MSTD LTR MaLR 43 396 0 2311 107 7 0 chr17 4342392 4342691 -85161862 + AluSx SINE Alu 1 301 -11 366 133 17 0 chr17 4342693 4342753 -85161800 + AluJ/FLAM SINE Alu 1 61 -241 1711 167 38 0 chr17 4342899 4343163 -85161390 - AluJb SINE Alu -22 290 17 1016 178 45 107 chr17 4343163 4343277 -85161276 - L1MC5 LINE L1 -306 7655 7535 2504 73 3 0 chr17 4343277 4343579 -85160974 + AluSp SINE Alu 1 303 -10 1016 178 45 107 chr17 4343579 4343726 -85160827 - L1MC5 LINE L1 -426 7535 7431 2362 100 7 3 chr17 4343726 4344036 -85160517 + AluSq SINE Alu 1 311 -2 1016 178 45 107 chr17 4344036 4344222 -85160331 - L1MC5 LINE L1 -530 7431 7235 1388 167 4 4 chr17 4344241 4344469 -85160084 - AluJb SINE Alu 0 312 85 2332 93 7 0 chr17 4344526 4344826 -85159727 - AluSx SINE Alu -10 302 1 362 256 143 30 chr17 4344826 4344959 -85159594 + LTR67 LTR ERVL 28 175 -382 2202 121 13 0 chr17 4345019 4345325 -85159228 - AluY SINE Alu -1 310 1 676 252 57 24 chr17 4345391 4345601 -85158952 + LTR67 LTR ERVL 334 550 -7 1302 68 6 12 chr17 4345733 4345896 -85158657 - AluSx SINE Alu -150 162 1 241 273 98 35 chr17 4346002 4346145 -85158408 - L1ME LINE L1 -202 5919 5768 2432 81 3 0 chr17 4346154 4346449 -85158104 - AluSp SINE Alu -17 296 1 274 253 13 0 chr17 4346449 4346524 -85158029 - L1ME LINE L1 -2021 5787 5712 1035 176 20 39 chr17 4346539 4346583 -85157970 - L1MB3 LINE L1 0 6183 6140 2231 114 0 10 chr17 4346583 4346746 -85157807 - AluSx SINE Alu -16 296 136 2414 78 7 13 chr17 4346746 4347052 -85157501 - AluY SINE Alu -7 304 1 2231 114 0 10 chr17 4347052 4347187 -85157366 - AluSx SINE Alu -176 136 1 1035 176 20 39 chr17 4347187 4347397 -85157156 - L1MB3 LINE L1 -43 6140 5934 1687 176 4 7 chr17 4347398 4347677 -85156876 + AluJb SINE Alu 3 280 -32 260 51 0 26 chr17 4347681 4347720 -85156833 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 2433 93 0 3 chr17 4347720 4348030 -85156523 + AluSx SINE Alu 1 309 -3 23 0 0 0 chr17 4348030 4348053 -85156500 + AT_rich Low_complexity Low_complexity 1 23 0 366 194 11 43 chr17 4348053 4348146 -85156407 - L1MB3 LINE L1 -232 5948 5859 306 107 0 0 chr17 4348146 4348202 -85156351 - Alu SINE Alu 0 302 247 399 232 20 10 chr17 4348351 4348450 -85156103 - MLT1L LTR MaLR -108 507 408 1386 239 100 25 chr17 4348456 4348807 -85155746 - MLT1F LTR MaLR -4 538 148 2301 121 0 0 chr17 4348807 4349113 -85155440 - AluSx SINE Alu -6 306 1 1386 239 100 25 chr17 4349113 4349192 -85155361 - MLT1F LTR MaLR -394 148 76 2317 109 0 6 chr17 4349303 4349614 -85154939 - AluSq SINE Alu -4 309 1 268 326 22 0 chr17 4349706 4349798 -85154755 - MLT1L LTR MaLR -319 296 203 1965 130 27 0 chr17 4349892 4350185 -85154368 + AluSg SINE Alu 1 301 -9 338 258 57 48 chr17 4350262 4350386 -85154167 + L1ME4a LINE L1 5936 6060 -61 2338 110 0 0 chr17 4350474 4350773 -85153780 + AluSg SINE Alu 1 299 -11 439 367 41 7 chr17 4350902 4351196 -85153357 - L2 LINE L2 -816 2498 2195 756 176 8 0 chr17 4351200 4351353 -85153200 + FLAM_C SINE Alu 2 155 0 26 0 0 0 chr17 4351436 4351462 -85153091 + AT_rich Low_complexity Low_complexity 1 26 0 228 229 0 0 chr17 4351470 4351518 -85153035 - Alu SINE Alu -7 293 246 277 256 12 23 chr17 4351821 4351907 -85152646 + CT-rich Low_complexity Low_complexity 2 86 0 2449 84 0 0 chr17 4352019 4352315 -85152238 + AluSg SINE Alu 1 296 -14 1266 109 0 0 chr17 4352315 4352480 -85152073 + AluSg/x SINE Alu 132 296 -13 2426 100 0 0 chr17 4352491 4352802 -85151751 + AluY SINE Alu 1 311 0 2399 109 0 3 chr17 4352833 4353145 -85151408 + AluSq SINE Alu 1 311 -2 2266 116 0 0 chr17 4353277 4353578 -85150975 + AluSx SINE Alu 5 305 -7 2162 97 47 3 chr17 4353599 4353899 -85150654 + AluSp SINE Alu 1 313 0 1814 171 0 10 chr17 4354018 4354316 -85150237 + AluJo SINE Alu 15 309 -3 344 269 101 8 chr17 4354354 4354473 -85150080 - MIR SINE MIR -13 249 120 375 350 39 15 chr17 4355519 4355725 -85148828 - L1M4 LINE L1 -2693 3453 3243 2270 102 0 7 chr17 4355757 4356060 -85148493 - AluSc SINE Alu -8 301 1 2457 99 0 0 chr17 4356266 4356579 -85147974 - AluSq SINE Alu 0 313 1 808 218 62 6 chr17 4356589 4356768 -85147785 - AluJb SINE Alu 0 312 124 1520 123 20 0 chr17 4357206 4357410 -85147143 + AluSg/x SINE Alu 83 290 -20 323 271 98 53 chr17 4357410 4357543 -85147010 - L1M4 LINE L1 -3652 2494 2356 269 143 0 32 chr17 4357745 4357808 -85146745 + (TTTC)n Simple_repeat Simple_repeat 1 61 0 1031 128 0 11 chr17 4357823 4358002 -85146551 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 646 186 9 0 chr17 4358002 4358116 -85146437 - FLAM_A SINE Alu -19 114 1 236 304 98 64 chr17 4358333 4358629 -85145924 + L2 LINE L2 2966 3271 -1 1657 222 19 91 chr17 4358656 4358729 -85145824 - L2 LINE L2 0 3313 3236 2127 113 0 3 chr17 4358729 4359032 -85145521 + AluSx SINE Alu 1 302 0 1657 222 19 91 chr17 4359032 4359560 -85144993 - L2 LINE L2 -77 3236 2758 741 317 94 39 chr17 4359773 4360136 -85144417 + L2 LINE L2 558 962 -2352 2303 95 0 13 chr17 4360136 4360440 -85144113 - AluSc SINE Alu -9 300 1 741 317 94 39 chr17 4360440 4360618 -85143935 + L2 LINE L2 962 1129 -2185 612 324 76 42 chr17 4360643 4360792 -85143761 - L2 LINE L2 0 3313 3171 1924 116 98 0 chr17 4360792 4361069 -85143484 + AluSx SINE Alu 1 304 -8 612 324 76 42 chr17 4361069 4361090 -85143463 - L2 LINE L2 -142 3171 3152 1640 191 0 23 chr17 4361090 4361225 -85143328 + AluJb SINE Alu 4 141 -171 2373 97 0 0 chr17 4361225 4361525 -85143028 + AluSq SINE Alu 3 302 -11 1640 191 0 23 chr17 4361525 4361692 -85142861 + AluJb SINE Alu 141 299 -13 612 324 76 42 chr17 4361692 4361900 -85142653 - L2 LINE L2 -161 3152 2921 696 162 0 0 chr17 4361958 4362063 -85142490 + FLAM_C SINE Alu 5 109 -34 51 0 0 0 chr17 4362106 4362157 -85142396 + AT_rich Low_complexity Low_complexity 1 51 0 599 329 63 77 chr17 4362160 4362342 -85142211 - L2 LINE L2 -416 2898 2715 2216 128 0 3 chr17 4362342 4362646 -85141907 - AluSx SINE Alu -5 307 5 599 329 63 77 chr17 4362646 4362658 -85141895 - L2 LINE L2 -599 2715 2704 2001 68 89 48 chr17 4362658 4362951 -85141602 - AluY SINE Alu -6 305 1 2033 129 31 0 chr17 4362952 4363238 -85141315 - AluSc SINE Alu -14 295 1 599 329 63 77 chr17 4363238 4363286 -85141267 - L2 LINE L2 -610 2704 2657 937 118 0 22 chr17 4363286 4363422 -85141131 + FLAM_C SINE Alu 1 133 0 599 329 63 77 chr17 4363422 4363855 -85140698 - L2 LINE L2 -657 2657 2228 1255 155 4 52 chr17 4363910 4364142 -85140411 + AluJo SINE Alu 86 306 -6 2238 125 3 0 chr17 4364144 4364455 -85140098 + AluSx SINE Alu 1 312 0 2454 90 0 0 chr17 4364458 4364770 -85139783 + AluSx SINE Alu 1 312 0 830 318 48 3 chr17 4364785 4365118 -85139435 - L2 LINE L2 -1161 2153 1806 1435 285 95 36 chr17 4365131 4365816 -85138737 - L2 LINE L2 -2066 1248 524 1913 126 48 3 chr17 4365819 4366112 -85138441 + AluSx SINE Alu 1 306 -6 402 217 12 0 chr17 4366117 4366200 -85138353 - BC200 scRNA scRNA -114 86 3 452 120 0 0 chr17 4366208 4366283 -85138270 - Alu SINE Alu -3 309 235 322 158 18 0 chr17 4366383 4366440 -85138113 + AluSp SINE Alu 125 182 -121 804 209 19 0 chr17 4366453 4366611 -85137942 - AluJo/FRAM SINE Alu -5 297 137 1305 172 32 48 chr17 4366614 4366864 -85137689 - AluJb SINE Alu -19 293 48 1187 147 0 0 chr17 4367579 4367749 -85136804 + AluSg/x SINE Alu 135 304 -6 2164 76 10 53 chr17 4367752 4368056 -85136497 + AluSc SINE Alu 1 291 -18 189 0 0 0 chr17 4368076 4368097 -85136456 + (TG)n Simple_repeat Simple_repeat 2 22 0 2250 96 0 17 chr17 4368299 4368623 -85135930 - AluY SINE Alu 0 311 1 1060 104 7 0 chr17 4368623 4368767 -85135786 - AluSq/x SINE Alu -167 145 1 909 192 0 0 chr17 4369166 4369322 -85135231 + FRAM SINE Alu 1 156 -20 759 113 96 0 chr17 4369459 4369574 -85134979 - AluSq/x SINE Alu -185 127 2 475 209 55 0 chr17 4370258 4370368 -85134185 - L1MC3 LINE L1 0 7785 7670 1654 112 0 0 chr17 4370412 4370626 -85133927 - AluSg SINE Alu -81 229 16 184 100 0 0 chr17 4371444 4371474 -85133079 + L2 LINE L2 2759 2788 -526 2179 127 3 10 chr17 4371633 4371947 -85132606 - AluSx SINE Alu 0 312 1 1685 139 79 7 chr17 4371951 4372254 -85132299 + Tigger1 DNA MER2_type 182 506 -1912 1143 157 0 0 chr17 4372275 4372441 -85132112 + FRAM SINE Alu 1 158 -18 2857 16 0 0 chr17 4372443 4372751 -85131802 + AluYa5 SINE Alu 1 308 -3 2082 148 3 0 chr17 4372753 4373057 -85131496 + AluSg SINE Alu 1 305 -5 1120 75 0 0 chr17 4373078 4373212 -85131341 + AluSg SINE Alu 1 134 -176 1971 109 4 0 chr17 4373212 4373469 -85131084 + AluSg SINE Alu 1 258 -52 2486 62 7 3 chr17 4373735 4374041 -85130512 + AluY SINE Alu 3 309 -2 1369 124 0 0 chr17 4374041 4374234 -85130319 + AluSg SINE Alu 118 310 0 1247 139 6 0 chr17 4374261 4374434 -85130119 + AluSg SINE Alu 6 179 -131 2005 126 0 0 chr17 4374570 4374840 -85129713 + AluSq SINE Alu 27 296 -17 391 273 70 98 chr17 4374843 4375206 -85129347 - L1MC4 LINE L1 -153 6703 5665 208 257 29 0 chr17 4375751 4375821 -85128732 + GA-rich Low_complexity Low_complexity 1 72 0 1194 122 74 0 chr17 4376443 4376611 -85127942 - AluSp SINE Alu 0 313 126 1763 146 7 17 chr17 4376611 4376905 -85127648 - AluSx SINE Alu -21 291 1 1194 122 74 0 chr17 4376905 4376951 -85127602 - AluSp SINE Alu -187 126 85 958 180 23 6 chr17 4376973 4377011 -85127542 - AluJo SINE Alu -137 175 139 2539 67 0 0 chr17 4377011 4377308 -85127245 - AluSx SINE Alu -15 297 1 958 180 23 6 chr17 4377308 4377441 -85127112 - AluJo SINE Alu -173 139 1 1613 199 3 7 chr17 4377523 4377815 -85126738 + AluJo SINE Alu 16 306 -6 2061 104 0 17 chr17 4377819 4378155 -85126398 + AluSq SINE Alu 1 331 0 345 255 120 32 chr17 4378359 4378575 -85125978 + L1MCa LINE L1 2469 2703 -3723 689 161 36 0 chr17 4378594 4378706 -85125847 + FLAM_A SINE Alu 1 116 -17 317 205 12 36 chr17 4378791 4378874 -85125679 + L1M4 LINE L1 5192 5272 -874 1596 183 47 9 chr17 4379020 4379364 -85125189 - L1M4 LINE L1 -1895 4251 3895 1046 160 28 0 chr17 4379368 4379549 -85125004 - AluSg/x SINE Alu -5 305 120 367 220 0 55 chr17 4379550 4379641 -85124912 - L1M4 LINE L1 -2277 3869 3784 2374 107 0 3 chr17 4379643 4379952 -85124601 - AluSx SINE Alu -4 308 1 2282 116 3 0 chr17 4379963 4380266 -85124287 - AluSp SINE Alu -9 304 1 375 137 0 3 chr17 4380286 4380357 -85124196 + MLT1F LTR MaLR 481 591 -4 2312 113 0 10 chr17 4381038 4381347 -85123206 - AluSx SINE Alu -6 306 1 335 293 188 17 chr17 4381466 4381705 -85122848 - L2 LINE L2 -4 3268 2989 2529 62 0 0 chr17 4381987 4382279 -85122274 - AluY SINE Alu -19 292 1 2208 125 0 3 chr17 4382456 4382761 -85121792 - AluSx SINE Alu -2 310 7 1218 160 18 36 chr17 4382769 4382988 -85121565 - AluJo SINE Alu -1 311 97 2415 87 6 3 chr17 4383143 4383454 -85121099 - AluSx SINE Alu 0 312 1 613 257 11 0 chr17 4383533 4383708 -85120845 - MER104 DNA MER2_type -3 177 1 1089 249 113 32 chr17 4383769 4384307 -85120246 - HAL1b LINE L1 -728 620 39 2038 98 18 4 chr17 4384498 4384774 -85119779 + AluSx SINE Alu 20 299 -13 923 184 17 17 chr17 4385073 4385247 -85119306 + AluJo SINE Alu 121 294 -18 2269 101 7 0 chr17 4385487 4385783 -85118770 - AluY SINE Alu -13 298 1 1086 92 14 0 chr17 4385785 4385927 -85118626 - AluSq/x SINE Alu -169 144 1 252 294 160 50 chr17 4386263 4386382 -85118171 - L2 LINE L2 0 3272 3141 414 245 152 22 chr17 4386710 4386894 -85117659 - L2 LINE L2 -456 2858 2651 533 63 76 13 chr17 4387424 4387503 -85117050 - AluS SINE Alu -228 85 2 306 0 0 0 chr17 4387742 4387776 -85116777 + (CA)n Simple_repeat Simple_repeat 2 35 0 2173 116 0 56 chr17 4387851 4388170 -85116383 + AluSq SINE Alu 7 307 -6 381 222 46 52 chr17 4388370 4388385 -85116168 - Charlie2a DNA MER1_type -12 2850 2836 858 143 0 8 chr17 4388385 4388518 -85116035 - FLAM_C SINE Alu 0 133 2 381 222 46 52 chr17 4388518 4388655 -85115898 - Charlie2a DNA MER1_type -26 2836 2699 * 599 221 32 32 chr17 4388649 4388839 -85115714 - Charlie2a DNA MER1_type -1206 1656 1467 797 259 62 35 chr17 4389034 4389324 -85115229 - Charlie2a DNA MER1_type -2561 301 4 2472 80 0 6 chr17 4390334 4390647 -85113906 + AluSq SINE Alu 1 311 -2 234 62 0 0 chr17 4390787 4390819 -85113734 + (CA)n Simple_repeat Simple_repeat 1 32 0 321 259 129 17 chr17 4391388 4391504 -85113049 - MIR SINE MIR -90 172 44 2263 104 0 3 chr17 4391677 4391975 -85112578 + AluY SINE Alu 5 301 -10 34 24 0 0 chr17 4392050 4392091 -85112462 + AT_rich Low_complexity Low_complexity 1 41 0 1323 147 9 9 chr17 4392242 4392453 -85112100 + AluSx SINE Alu 1 211 -101 366 149 0 0 chr17 4392454 4392517 -85112036 + AluSq/x SINE Alu 78 133 -170 1785 156 32 3 chr17 4392519 4392802 -85111751 + AluSx SINE Alu 7 297 -15 408 288 18 9 chr17 4392802 4392913 -85111640 - MIR SINE MIR -131 131 20 781 206 0 0 chr17 4392931 4393057 -85111496 - FLAM_A SINE Alu -7 126 1 2411 182 42 24 chr17 4393069 4393363 -85111190 - L1MB5 LINE L1 0 6174 5866 2243 119 0 3 chr17 4393363 4393666 -85110887 - AluSx SINE Alu -10 302 1 2411 182 42 24 chr17 4393666 4393876 -85110677 - L1MB5 LINE L1 -308 5866 5661 1459 153 0 36 chr17 4393876 4394125 -85110428 - AluSx SINE Alu 0 312 73 2430 91 0 0 chr17 4394125 4394420 -85110133 - AluY SINE Alu -14 297 1 450 145 0 0 chr17 4394420 4394482 -85110071 - AluSx SINE Alu -230 82 21 2247 117 0 7 chr17 4394504 4394812 -85109741 - AluSg SINE Alu -4 306 1 1676 153 40 45 chr17 4394812 4395086 -85109467 - L1MB5 LINE L1 -513 5667 5394 2241 143 0 0 chr17 4395086 4395394 -85109159 - AluSg SINE Alu -2 308 1 1676 153 40 45 chr17 4395394 4395471 -85109082 - L1MB5 LINE L1 -786 5394 5318 1047 182 0 0 chr17 4395483 4395642 -85108911 - FRAM SINE Alu -17 159 1 1310 240 127 83 chr17 4395685 4396022 -85108531 - L1MC4 LINE L1 0 8042 7721 2457 90 0 10 chr17 4396022 4396334 -85108219 - AluSg SINE Alu -1 309 1 1310 240 127 83 chr17 4396334 4396381 -85108172 - L1MC4 LINE L1 -321 7721 7678 2336 102 3 0 chr17 4396381 4396676 -85107877 - AluSp SINE Alu -17 296 1 1310 240 127 83 chr17 4396676 4396799 -85107754 - L1MC4 LINE L1 -364 7678 7562 1744 137 10 73 chr17 4396799 4397112 -85107441 - AluJb SINE Alu -19 293 1 1310 240 127 83 chr17 4397112 4397406 -85107147 - L1MC4 LINE L1 -480 7562 7204 897 136 0 0 chr17 4398363 4398481 -85106072 + AluJo/FLAM SINE Alu 1 118 -194 2455 74 0 35 chr17 4398481 4398793 -85105760 - AluSx SINE Alu -11 301 1 2235 102 10 0 chr17 4398793 4399087 -85105466 - AluSx SINE Alu -15 297 1 24 0 0 0 chr17 4399100 4399124 -85105429 + AT_rich Low_complexity Low_complexity 1 24 0 707 192 172 0 chr17 4399240 4399391 -85105162 - MIR SINE MIR -69 193 17 2164 98 26 16 chr17 4399586 4399891 -85104662 - AluSx SINE Alu -1 311 4 2636 43 3 0 chr17 4399899 4400200 -85104353 - AluY SINE Alu -9 302 1 23 0 0 0 chr17 4400581 4400604 -85103949 + AT_rich Low_complexity Low_complexity 1 23 0 2000 134 10 0 chr17 4400732 4401022 -85103531 - AluSq SINE Alu -12 301 9 877 153 14 28 chr17 4401025 4401169 -85103384 - AluSg/x SINE Alu -46 266 125 1085 188 62 19 chr17 4401342 4401550 -85103003 - MER20 DNA MER1_type -2 217 1 1992 104 6 71 chr17 4401889 4402215 -85102338 - AluSx SINE Alu -7 305 1 278 222 19 0 chr17 4402263 4402317 -85102236 - MIR SINE MIR -8 254 200 2239 126 0 0 chr17 4402318 4402627 -85101926 - AluSx SINE Alu -3 309 1 2059 145 0 3 chr17 4402636 4402932 -85101621 - AluSx SINE Alu -17 295 1 2266 93 3 3 chr17 4402953 4403242 -85101311 - AluSp SINE Alu -24 289 1 2096 99 58 3 chr17 4403990 4404283 -85100270 - AluSc SINE Alu 0 309 1 2293 108 6 10 chr17 4404887 4405201 -85099352 - AluSp SINE Alu 0 313 1 758 225 55 5 chr17 4405217 4405435 -85099118 + L1MD2 LINE L1 5099 5327 -819 801 213 0 18 chr17 4405435 4405599 -85098954 + FRAM SINE Alu 1 154 -22 1217 178 19 16 chr17 4405599 4405857 -85098696 + L1MD2 LINE L1 5324 5582 -777 22 0 0 0 chr17 4405914 4405936 -85098617 + AT_rich Low_complexity Low_complexity 1 22 0 838 161 0 0 chr17 4405936 4406054 -85098499 - FLAM_C SINE Alu -25 118 1 533 68 0 0 chr17 4406056 4406129 -85098424 - AluSp/q SINE Alu -13 300 228 703 175 186 5 chr17 4406162 4406356 -85098197 + L1MD2 LINE L1 5920 6148 -211 1280 135 122 16 chr17 4406402 4406647 -85097906 - MER44D DNA MER2_type 0 605 280 418 165 22 33 chr17 4406663 4406754 -85097799 - MER44D DNA MER2_type -544 161 72 211 250 17 17 chr17 4407099 4407159 -85097394 + MIR SINE MIR 6 65 -197 2284 99 3 3 chr17 4407161 4407463 -85097090 - AluSq SINE Alu -11 302 1 1807 96 12 0 chr17 4407481 4407721 -85096832 + AluSp SINE Alu 54 296 -17 1394 184 52 42 chr17 4407770 4408079 -85096474 - AluJo SINE Alu 0 312 1 1831 110 43 7 chr17 4408314 4408615 -85095938 + THE1C LTR MaLR 63 374 -1 598 139 0 30 chr17 4408626 4408727 -85095826 - FLAM_C SINE Alu -6 137 40 207 0 0 0 chr17 4408753 4408776 -85095777 + (A)n Simple_repeat Simple_repeat 1 23 0 240 267 43 26 chr17 4409060 4409176 -85095377 - MIR SINE MIR -10 252 135 * 2792 258 110 58 chr17 4409130 4410205 -85094348 + L2 LINE L2 1401 2753 -560 1282 176 200 4 chr17 4410205 4410455 -85094098 + AluJo SINE Alu 1 299 -3 2792 258 110 58 chr17 4410455 4411047 -85093506 + L2 LINE L2 2753 3313 0 503 100 0 0 chr17 4411166 4411236 -85093317 + AluSq SINE Alu 1 70 -243 851 149 0 37 chr17 4411236 4411397 -85093156 + AluSp/q SINE Alu 159 313 0 1452 155 76 49 chr17 4411403 4411707 -85092846 + AluJo SINE Alu 1 312 0 225 30 0 0 chr17 4412008 4412041 -85092512 - L1PA16 LINE L1 -5 6161 6129 2410 80 0 3 chr17 4413242 4413553 -85091000 - AluSg SINE Alu 0 310 1 305 289 11 11 chr17 4413612 4413702 -85090851 - L2 LINE L2 -4 3268 3179 2293 81 0 35 chr17 4413918 4414228 -85090325 + AluSx SINE Alu 1 299 -13 2230 78 26 3 chr17 4414878 4415184 -85089369 - AluSq SINE Alu 0 313 1 372 399 26 21 chr17 4415449 4415642 -85088911 + MIR SINE MIR 21 214 -48 557 200 50 0 chr17 4415732 4415857 -85088696 + MER53 DNA DNA 2 139 -50 1924 132 4 0 chr17 4415857 4416163 -85088390 + AluSx SINE Alu 1 307 0 557 200 50 0 chr17 4416163 4416196 -85088357 + MER53 DNA DNA 139 169 -20 1313 168 0 42 chr17 4416196 4416434 -85088119 - AluJb SINE Alu -1 311 84 889 147 0 0 chr17 4416587 4416723 -85087830 + AluSg/x SINE Alu 176 311 -1 201 39 0 0 chr17 4416723 4416749 -85087804 + (GA)n Simple_repeat Simple_repeat 1 26 0 726 62 0 0 chr17 4416749 4416845 -85087708 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 1956 137 3 13 chr17 4417854 4418154 -85086399 - AluSq SINE Alu -16 297 1 1966 105 14 27 chr17 4418201 4418518 -85086035 - AluSp SINE Alu 0 313 1 270 0 0 0 chr17 4418520 4418550 -85086003 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1716 83 9 0 chr17 4418550 4418779 -85085774 - AluSg1 SINE Alu -29 280 50 937 107 0 0 chr17 4418779 4418910 -85085643 - AluSq/x SINE Alu -178 135 5 1211 132 5 44 chr17 4419023 4419259 -85085294 - AluJb SINE Alu 0 312 85 617 255 25 45 chr17 4419273 4419473 -85085080 + L1MC4a LINE L1 5512 5707 -2101 2402 82 0 13 chr17 4419473 4419790 -85084763 - AluSp SINE Alu 0 313 1 830 58 0 0 chr17 4419801 4419904 -85084649 - AluY SINE Alu -23 288 186 334 228 172 17 chr17 4419904 4420084 -85084469 + L1MC4a LINE L1 5704 5911 -1897 1660 125 95 8 chr17 4420113 4420401 -85084152 + AluSg SINE Alu 1 310 0 1677 152 48 21 chr17 4420407 4420696 -85083857 + AluJb SINE Alu 1 297 -15 2334 82 0 0 chr17 4420702 4420996 -85083557 + AluSc SINE Alu 1 294 -15 198 0 0 0 chr17 4421008 4421030 -85083523 + (CA)n Simple_repeat Simple_repeat 2 23 0 306 353 16 16 chr17 4421307 4421429 -85083124 + MIR3 SINE MIR 73 194 -14 2234 89 7 10 chr17 4421473 4421777 -85082776 + AluSx SINE Alu 1 303 -9 1926 119 20 0 chr17 4421777 4422070 -85082483 + AluSx SINE Alu 1 300 -12 272 255 224 0 chr17 4422722 4422820 -85081733 + MIR3 SINE MIR 36 155 -53 235 246 0 18 chr17 4422809 4422866 -85081687 + MER5A DNA MER1_type 112 167 -22 * 2040 116 3 3 chr17 4422883 4423177 -85081376 - AluSx SINE Alu -18 294 1 279 219 0 0 chr17 4423384 4423425 -85081128 + A-rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr17 4423432 4423454 -85081099 + GC_rich Low_complexity Low_complexity 1 22 0 23 40 0 0 chr17 4423512 4423537 -85081016 + GC_rich Low_complexity Low_complexity 1 25 0 241 328 0 0 chr17 4423539 4423600 -85080953 + A-rich Low_complexity Low_complexity 1 61 0 2139 101 0 26 chr17 4424108 4424416 -85080137 - AluSx SINE Alu -12 300 1 2306 90 0 3 chr17 4425269 4425570 -85078983 - AluSq SINE Alu -13 300 1 351 277 129 9 chr17 4426183 4426315 -85078238 + MIR3 SINE MIR 37 163 -45 180 274 105 21 chr17 4426231 4426326 -85078227 - L2 LINE L2 -1876 1438 1336 * 375 375 44 13 chr17 4427018 4427247 -85077306 + MIR SINE MIR 22 257 -5 240 363 113 29 chr17 4427480 4427684 -85076869 + L3 LINE CR1 1311 1531 -46 183 328 118 8 chr17 4428721 4428840 -85075713 - L2 LINE L2 -175 3097 2966 204 272 90 0 chr17 4428939 4429046 -85075507 + MIR3 SINE MIR 99 215 -31 248 327 27 0 chr17 4429414 4429524 -85075029 + MIR SINE MIR 23 135 -73 185 196 43 0 chr17 4429659 4429705 -85074848 - MIR SINE MIR -118 144 97 203 83 28 28 chr17 4430126 4430162 -85074391 + (TCC)n Simple_repeat Simple_repeat 3 38 0 458 203 30 0 chr17 4430163 4430296 -85074257 + CT-rich Low_complexity Low_complexity 2 138 0 1085 165 6 0 chr17 4430303 4430473 -85074080 - AluJb SINE Alu -7 305 135 224 30 30 0 chr17 4430474 4430507 -85074046 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1924 125 0 41 chr17 4430507 4430802 -85073751 - AluSq SINE Alu -30 283 1 1495 101 0 0 chr17 4431135 4431334 -85073219 - AluSc SINE Alu 0 309 111 1889 129 0 37 chr17 4431556 4431873 -85072680 - AluSx SINE Alu 0 306 1 251 291 88 9 chr17 4431912 4432026 -85072527 + MIR SINE MIR 28 147 -71 1058 156 78 0 chr17 4432026 4432205 -85072348 - AluJo SINE Alu -47 265 73 189 246 90 30 chr17 4432508 4432642 -85071911 - L2 LINE L2 -2418 896 755 322 314 105 8 chr17 4433302 4433340 -85071213 - MIR SINE MIR -110 152 119 1748 113 109 22 chr17 4433340 4433615 -85070938 + AluSg SINE Alu 1 299 -11 322 314 105 8 chr17 4433615 4433700 -85070853 - MIR SINE MIR -143 119 17 199 239 0 0 chr17 4433780 4433826 -85070727 - MIR SINE MIR -112 150 105 243 315 55 16 chr17 4433949 4434076 -85070477 + L2 LINE L2 2923 3054 -218 2332 77 0 26 chr17 4434585 4434896 -85069657 - AluSg SINE Alu -7 303 1 2273 92 0 0 chr17 4434896 4435188 -85069365 - AluSx SINE Alu -20 292 1 229 172 0 47 chr17 4435951 4436006 -85068547 - FAM SINE Alu -136 179 126 1516 141 0 0 chr17 4436006 4436226 -85068327 - AluJo SINE Alu -92 220 1 1024 130 59 18 chr17 4436481 4436670 -85067883 - AluSg/x SINE Alu 0 312 121 2273 113 0 0 chr17 4436679 4436990 -85067563 - AluSx SINE Alu -1 311 1 1891 169 0 0 chr17 4437085 4437386 -85067167 + AluJo SINE Alu 1 301 -11 216 0 0 0 chr17 4438738 4438762 -85065791 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 2126 103 7 0 chr17 4438984 4439294 -85065259 + AluSx SINE Alu 1 312 0 1964 129 3 35 chr17 4439313 4439624 -85064929 + AluSx SINE Alu 1 301 -11 204 250 36 27 chr17 4439630 4439742 -85064811 + (TATATG)n Simple_repeat Simple_repeat 4 116 0 306 250 50 0 chr17 4440423 4440503 -85064050 + MIR SINE MIR 82 165 -97 2311 85 3 3 chr17 4440541 4440848 -85063705 - AluSq SINE Alu -6 307 1 1167 246 131 65 chr17 4440853 4441313 -85063240 - MLT1G1 LTR MaLR 0 595 90 1720 172 3 3 chr17 4441313 4441609 -85062944 + AluSx SINE Alu 1 296 -16 1167 246 131 65 chr17 4441609 4441704 -85062849 - MLT1G1 LTR MaLR -505 90 3 801 247 128 45 chr17 4441993 4442127 -85062426 - L2 LINE L2 -1 3312 3191 2293 101 0 0 chr17 4442127 4442424 -85062129 + AluSg SINE Alu 1 297 -13 2109 106 3 10 chr17 4442425 4442727 -85061826 + AluSx SINE Alu 1 300 -12 801 247 128 45 chr17 4442727 4443147 -85061406 - L2 LINE L2 -121 3192 2708 441 293 105 38 chr17 4443152 4443524 -85061029 - MLT1H LTR MaLR 0 549 153 1916 119 10 17 chr17 4443541 4443836 -85060717 - AluSx SINE Alu -19 293 1 249 273 0 91 chr17 4443836 4443957 -85060596 - MLT1H LTR MaLR -419 123 14 1432 195 18 131 chr17 4443970 4444024 -85060529 - L2 LINE L2 -607 2707 2649 617 184 22 44 chr17 4444024 4444160 -85060393 + FLAM_C SINE Alu 1 133 0 1432 195 18 131 chr17 4444160 4444557 -85059996 - L2 LINE L2 -665 2649 2307 850 63 16 8 chr17 4444562 4444688 -85059865 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 2015 96 7 4 chr17 4444689 4444969 -85059584 - AluSq SINE Alu -32 281 1 1902 134 0 7 chr17 4444978 4445268 -85059285 - AluJb SINE Alu -24 288 1 1429 127 0 9 chr17 4445310 4445523 -85059030 + AluSg/x SINE Alu 93 303 -9 388 141 343 20 chr17 4445523 4445622 -85058931 - L2 LINE L2 -1020 2294 2164 1009 132 18 150 chr17 4445989 4446031 -85058522 - L1MB8 LINE L1 0 6184 6138 2115 105 3 0 chr17 4446031 4446317 -85058236 + AluSx SINE Alu 3 289 -23 1009 132 18 150 chr17 4446317 4446600 -85057953 - L1MB8 LINE L1 -46 6138 5902 751 248 34 41 chr17 4446676 4446807 -85057746 - HAL1b LINE L1 -451 897 767 2228 106 3 0 chr17 4446807 4447108 -85057445 - AluSp SINE Alu -11 302 1 751 248 34 41 chr17 4447108 4447271 -85057282 - HAL1b LINE L1 -581 767 605 2101 141 0 0 chr17 4447338 4447650 -85056903 - AluJb SINE Alu 0 312 1 2269 87 3 3 chr17 4447745 4448043 -85056510 - AluSx SINE Alu -14 298 1 180 111 0 0 chr17 4448066 4448093 -85056460 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 1914 148 19 16 chr17 4448661 4448972 -85055581 - AluJb SINE Alu 0 312 1 1900 122 37 10 chr17 4449275 4449571 -85054982 - AluSq SINE Alu -9 304 1 229 351 0 6 chr17 4450801 4450975 -85053578 + (TG)n Simple_repeat Simple_repeat 1 173 0 253 354 54 0 chr17 4451819 4451949 -85052604 - MIR3 SINE MIR -9 199 63 2313 95 0 9 chr17 4453838 4454153 -85050400 - AluSx SINE Alu 0 312 1 424 293 38 15 chr17 4454678 4454811 -85049742 - MIR SINE MIR -38 170 35 2214 92 7 0 chr17 4454828 4455122 -85049431 - AluSq SINE Alu -17 296 1 700 269 23 0 chr17 4455601 4455776 -85048777 + MIR SINE MIR 23 201 -61 212 254 18 0 chr17 4455918 4455973 -85048580 - L3 LINE CR1 -102 1475 1420 255 250 157 0 chr17 4456113 4456223 -85048330 + MIR SINE MIR 38 172 -63 264 204 0 0 chr17 4456411 4456465 -85048088 - L3 LINE CR1 -291 1286 1233 339 282 183 12 chr17 4456882 4457205 -85047348 - L2 LINE L2 -1437 1877 1500 494 261 17 52 chr17 4457473 4457683 -85046870 + MIR SINE MIR 5 203 -59 2332 91 3 0 chr17 4457757 4458064 -85046489 - AluSc SINE Alu -1 308 1 197 307 85 53 chr17 4458102 4458149 -85046404 - L3 LINE CR1 -3 1574 1530 581 256 26 37 chr17 4458149 4458340 -85046213 - MER5A DNA MER1_type 0 189 1 197 307 85 53 chr17 4458340 4458481 -85046072 - L3 LINE CR1 -47 1530 1380 576 282 164 14 chr17 4459968 4460188 -85044365 + MIR SINE MIR 2 254 -8 2187 127 0 0 chr17 4460191 4460499 -85044054 - AluSx SINE Alu -4 308 1 279 294 104 31 chr17 4460884 4461047 -85043506 - L2 LINE L2 -172 3100 2926 497 313 38 0 chr17 4461126 4461263 -85043290 - MIR SINE MIR -89 173 28 2313 90 6 0 chr17 4461263 4461574 -85042979 - AluSq SINE Alu 0 313 1 497 313 38 0 chr17 4461574 4461596 -85042957 - MIR SINE MIR -234 28 8 1420 267 91 9 chr17 4462555 4462770 -85041783 - L2 LINE L2 -1 3312 3116 2286 87 13 0 chr17 4462770 4463070 -85041483 + AluSg SINE Alu 1 304 -6 1420 267 91 9 chr17 4463070 4463607 -85040946 - L2 LINE L2 -197 3116 2500 2222 103 10 0 chr17 4464306 4464607 -85039946 - AluSq SINE Alu -9 304 1 1740 162 7 23 chr17 4465609 4465918 -85038635 + AluSx SINE Alu 1 304 -8 2263 75 17 0 chr17 4467008 4467301 -85037252 - AluSp SINE Alu -15 298 1 917 139 0 7 chr17 4467302 4467439 -85037114 - AluSq/x SINE Alu -177 136 1 252 314 25 16 chr17 4467722 4467843 -85036710 - LTR67 LTR ERVL -2 555 434 2198 112 26 0 chr17 4468087 4468392 -85036161 + AluSp SINE Alu 1 313 0 214 365 52 26 chr17 4468437 4468552 -85036001 + MIR3 SINE MIR 89 206 -2 450 253 106 88 chr17 4468984 4469257 -85035296 - L2 LINE L2 0 3272 2995 2322 64 0 10 chr17 4469585 4469880 -85034673 - AluY SINE Alu -19 292 1 199 211 0 0 chr17 4470788 4470826 -85033727 - MIR SINE MIR -62 146 109 358 252 17 50 chr17 4471223 4471342 -85033211 - MIR SINE MIR -64 144 30 21 36 0 0 chr17 4472170 4472198 -85032355 + GC_rich Low_complexity Low_complexity 1 28 0 304 183 25 33 chr17 4472346 4472466 -85032087 + (CCG)n Simple_repeat Simple_repeat 1 119 0 34 0 0 0 chr17 4472500 4472534 -85032019 + GC_rich Low_complexity Low_complexity 1 34 0 331 303 38 23 chr17 4473405 4473537 -85031016 + MIR3 SINE MIR 23 156 -52 266 385 96 0 chr17 4473759 4473894 -85030659 - MIR3 SINE MIR -13 195 48 494 278 14 4 chr17 4474878 4475034 -85029519 - MIR3 SINE MIR -61 147 3 2388 84 3 0 chr17 4475151 4475461 -85029092 + AluSx SINE Alu 1 311 -1 435 268 43 0 chr17 4475550 4475688 -85028865 + MER103 DNA DNA 21 164 -2 625 175 0 58 chr17 4475882 4476002 -85028551 - AluJo SINE Alu -11 301 189 1975 110 40 0 chr17 4476021 4476293 -85028260 + AluSx SINE Alu 2 284 -28 262 204 0 0 chr17 4476385 4476439 -85028114 + AluJ/monomer SINE Alu 247 300 -1 21 36 0 0 chr17 4476439 4476467 -85028086 + AT_rich Low_complexity Low_complexity 1 28 0 931 169 42 0 chr17 4476496 4476662 -85027891 - AluJo SINE Alu -125 187 15 495 350 104 30 chr17 4476678 4477101 -85027452 + L2 LINE L2 2195 2668 -646 2304 93 0 3 chr17 4477101 4477403 -85027150 - AluSx SINE Alu -11 301 1 495 350 104 30 chr17 4477403 4477519 -85027034 + L2 LINE L2 2668 2774 -540 906 71 0 0 chr17 4477534 4477647 -85026906 + AluSc SINE Alu 1 113 -196 4588 56 15 7 chr17 4477758 4478478 -85026075 + SVA Other Other 316 1157 -229 1061 117 111 6 chr17 4478503 4478674 -85025879 + AluSg/x SINE Alu 102 290 -20 887 299 95 50 chr17 4481163 4481608 -85022945 + HAL1 LINE L1 1060 1558 -949 1806 169 0 0 chr17 4481608 4481903 -85022650 - AluJo SINE Alu -13 299 5 887 299 95 50 chr17 4481903 4482245 -85022308 + HAL1 LINE L1 1558 1883 -624 21 0 0 0 chr17 4482293 4482314 -85022239 + AT_rich Low_complexity Low_complexity 1 21 0 2309 66 7 0 chr17 4482321 4482610 -85021943 + AluY SINE Alu 1 291 -20 200 136 0 68 chr17 4482748 4482792 -85021761 + (TTTTTG)n Simple_repeat Simple_repeat 1 41 0 2065 67 32 21 chr17 4483028 4483313 -85021240 + AluSp SINE Alu 1 288 -25 762 80 0 0 chr17 4483422 4483522 -85021031 + AluSg/x SINE Alu 198 297 -15 2242 102 3 3 chr17 4483654 4483967 -85020586 + AluSp SINE Alu 1 313 0 1975 131 7 0 chr17 4483973 4484263 -85020290 + AluSx SINE Alu 1 292 -20 3945 128 134 43 chr17 4484402 4485813 -85018740 - pTR5 LTR ERV1 0 2438 742 542 189 23 23 chr17 4485880 4486012 -85018541 - LTR45 LTR ERV1 0 525 394 2248 41 24 10 chr17 4486052 4486345 -85018208 + AluY SINE Alu 1 297 -14 2196 240 121 40 chr17 4486700 4486893 -85017660 + HAL1 LINE L1 261 437 -2070 2196 86 0 0 chr17 4486893 4487200 -85017353 + AluSg SINE Alu 1 307 0 2196 240 121 40 chr17 4487200 4488116 -85016437 + HAL1 LINE L1 437 1460 -1047 24 0 0 0 chr17 4488116 4488140 -85016413 + AT_rich Low_complexity Low_complexity 1 24 0 32 0 0 0 chr17 4488345 4488377 -85016176 + AT_rich Low_complexity Low_complexity 1 32 0 611 68 0 0 chr17 4489163 4489237 -85015316 + AluSp/q SINE Alu 216 289 -24 2226 91 44 0 chr17 4489247 4489544 -85015009 + AluSq SINE Alu 1 310 -3 343 276 95 9 chr17 4489626 4489836 -85014717 + L1MC4a LINE L1 6026 6253 -1555 2117 102 0 32 chr17 4489865 4490180 -85014373 - AluY SINE Alu -6 305 1 611 68 0 0 chr17 4490190 4490264 -85014289 - AluSp/q SINE Alu -24 289 216 2365 85 0 0 chr17 4490535 4490842 -85013711 + AluSx SINE Alu 1 307 -5 1520 194 33 0 chr17 4491154 4491453 -85013100 - AluJb SINE Alu 0 308 1 1387 180 3 42 chr17 4494761 4494921 -85009632 - AluJo SINE Alu -19 293 147 2281 86 0 19 chr17 4494921 4495235 -85009318 - AluSq SINE Alu -5 308 1 1387 180 3 42 chr17 4495235 4495358 -85009195 - AluJo SINE Alu -165 147 21 2294 80 3 13 chr17 4495540 4495840 -85008713 + AluSx SINE Alu 1 297 -15 548 314 105 0 chr17 4496302 4496493 -85008060 + MIR SINE MIR 42 252 -10 2007 134 7 3 chr17 4496501 4496807 -85007746 + AluJb SINE Alu 1 307 -5 2197 101 7 0 chr17 4496991 4497288 -85007265 + AluSx SINE Alu 1 299 -13 2298 119 0 0 chr17 4497817 4498128 -85006425 + AluSx SINE Alu 1 311 -1 527 354 134 29 chr17 4498371 4498848 -85005705 - L3 LINE CR1 -50 1527 1001 658 51 0 0 chr17 4499260 4499339 -85005214 + AluSq/x SINE Alu 57 135 -178 2415 87 0 0 chr17 4499339 4499650 -85004903 + AluSq SINE Alu 1 311 -2 553 155 124 72 chr17 4499743 4499937 -85004616 + MER46A DNA MER2_type 32 235 -1 244 281 25 8 chr17 4500101 4500142 -85004411 - HAL1b LINE L1 0 1348 1309 1800 153 14 0 chr17 4500142 4500417 -85004136 + AluJo SINE Alu 1 279 -33 291 28 0 0 chr17 4500418 4500454 -85004099 + (CAAT)n Simple_repeat Simple_repeat 4 39 0 244 281 25 8 chr17 4500454 4500531 -85004022 - HAL1b LINE L1 -38 1310 1226 1701 181 0 20 chr17 4500536 4500835 -85003718 - AluJb SINE Alu -19 293 1 251 197 0 45 chr17 4502987 4503053 -85001500 + (CTGGGG)n Simple_repeat Simple_repeat 2 64 0 2022 128 3 3 chr17 4503122 4503420 -85001133 - AluSx SINE Alu -14 298 1 448 304 131 0 chr17 4503621 4503835 -85000718 + LTR33 LTR ERVL 41 282 -239 330 260 30 0 chr17 4503909 4504009 -85000544 + LTR33 LTR ERVL 417 519 -2 360 256 103 0 chr17 4504415 4504532 -85000021 + MIR3 SINE MIR 58 186 -22 275 239 147 91 chr17 4505440 4505725 -84998828 + L2 LINE L2 2950 3250 -22 2078 112 0 3 chr17 4507461 4507795 -84996758 - AluSx SINE Alu 0 333 1 182 189 0 0 chr17 4509130 4509167 -84995386 + L2 LINE L2 3028 3064 -208 244 236 0 42 chr17 4509267 4509339 -84995214 - L3 LINE CR1 -108 1469 1401 278 270 79 53 chr17 4510176 4510328 -84994225 + MIR3 SINE MIR 3 158 -50 240 357 29 53 chr17 4510337 4510508 -84994045 - MIR SINE MIR -22 240 74 242 388 165 0 chr17 4510759 4510965 -84993588 - L2 LINE L2 -95 3177 2938 218 284 154 79 chr17 4511337 4511695 -84992858 - L2 LINE L2 -917 2397 1980 2441 87 0 0 chr17 4511695 4512007 -84992546 + AluSx SINE Alu 1 312 0 218 284 154 79 chr17 4512007 4512208 -84992345 - L2 LINE L2 -1333 1981 1796 245 340 32 53 chr17 4512984 4513172 -84991381 - MIR3 SINE MIR -20 188 5 239 338 64 39 chr17 4514884 4515118 -84989435 + L2 LINE L2 2170 2409 -905 258 32 0 0 chr17 4515418 4515449 -84989104 + (TC)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr17 4517034 4517055 -84987498 + GC_rich Low_complexity Low_complexity 1 21 0 25 65 0 0 chr17 4517465 4517511 -84987042 + GC_rich Low_complexity Low_complexity 1 46 0 322 237 29 58 chr17 4519882 4520021 -84984532 - MIR3 SINE MIR -73 135 1 183 287 73 45 chr17 4520157 4520404 -84984149 + L2 LINE L2 2021 2274 -1040 405 0 0 0 chr17 4520579 4520624 -84983929 + (CA)n Simple_repeat Simple_repeat 1 45 0 212 355 86 0 chr17 4520649 4520742 -84983811 + L2 LINE L2 3209 3309 -4 271 287 104 9 chr17 4520772 4520887 -84983666 - L2 LINE L2 -789 2525 2400 2130 119 0 34 chr17 4520894 4521214 -84983339 + AluSx SINE Alu 1 309 -3 2296 94 0 7 chr17 4522533 4522842 -84981711 + AluSx SINE Alu 1 307 -5 1331 34 0 53 chr17 4522879 4523088 -84981465 + SVA Other Other 1 198 -1188 868 126 47 126 chr17 4523620 4523786 -84980767 - Charlie5 DNA MER1_type 0 2585 2448 2245 83 3 17 chr17 4523786 4524088 -84980465 + AluSx SINE Alu 1 298 -14 868 126 47 126 chr17 4524088 4524198 -84980355 - Charlie5 DNA MER1_type -137 2448 2331 275 357 170 6 chr17 4524251 4524433 -84980120 + MIR SINE MIR 45 256 -6 205 282 103 0 chr17 4524790 4524868 -84979685 - MIR SINE MIR -62 146 61 199 250 225 15 chr17 4525690 4525815 -84978738 - MIR SINE MIR -68 140 19 180 345 58 23 chr17 4526705 4526792 -84977761 + L2 LINE L2 2987 3076 -196 1051 216 11 42 chr17 4529111 4529375 -84975178 - MIR SINE MIR 0 262 7 345 294 43 49 chr17 4529998 4530161 -84974392 + MER5A DNA MER1_type 24 185 -4 208 306 69 0 chr17 4530152 4530224 -84974329 - MIR3 SINE MIR -39 169 93 * 1027 166 0 0 chr17 4530983 4531146 -84973407 + AluJb SINE Alu 134 296 -16 216 365 78 17 chr17 4531155 4531385 -84973168 - L2 LINE L2 -1544 1770 1527 195 222 37 19 chr17 4532116 4532170 -84972383 - L2 LINE L2 -212 3060 3006 307 310 77 36 chr17 4532561 4532730 -84971823 + MIR3 SINE MIR 3 183 -63 230 337 12 0 chr17 4532939 4533022 -84971531 - L2 LINE L2 -213 3059 2976 384 282 46 23 chr17 4533632 4533763 -84970790 + MIR SINE MIR 66 199 -63 357 281 0 0 chr17 4534324 4534459 -84970094 + (TG)n Simple_repeat Simple_repeat 1 135 0 294 414 37 0 chr17 4536934 4537096 -84967457 - MIR SINE MIR -59 203 36 2339 99 0 3 chr17 4537723 4538036 -84966517 + AluSx SINE Alu 1 312 0 370 325 20 54 chr17 4538154 4538357 -84966196 - L2 LINE L2 -85 3187 2992 227 222 22 74 chr17 4538411 4538546 -84966007 + L1MEd LINE L1 73 200 -5919 295 178 22 44 chr17 4538616 4538706 -84965847 - L1MC5 LINE L1 -35 7926 7839 783 304 66 68 chr17 4538939 4539068 -84965485 + L1MEd LINE L1 583 711 -5408 2173 86 10 3 chr17 4539068 4539360 -84965193 + AluSq SINE Alu 1 294 -19 783 304 66 68 chr17 4539360 4539716 -84964837 + L1MEd LINE L1 711 1067 -5052 188 391 30 17 chr17 4539782 4539935 -84964618 - L2 LINE L2 -455 2859 2701 2539 52 3 0 chr17 4539935 4540245 -84964308 + AluY SINE Alu 1 311 0 188 391 30 17 chr17 4540245 4540321 -84964232 - L2 LINE L2 -613 2701 2627 322 263 30 20 chr17 4541758 4541857 -84962696 + MIR3 SINE MIR 56 155 -53 437 262 111 8 chr17 4542415 4542541 -84962012 + MIR SINE MIR 13 151 -111 267 375 0 0 chr17 4542724 4542828 -84961725 + L2 LINE L2 2988 3091 -181 502 306 61 25 chr17 4543142 4543250 -84961303 - MIR SINE MIR -24 238 118 1902 207 39 42 chr17 4543250 4543609 -84960944 - MER63B DNA MER1_type -629 433 74 2207 105 0 0 chr17 4543609 4543905 -84960648 + AluSx SINE Alu 1 296 -16 1902 207 39 42 chr17 4543905 4543979 -84960574 - MER63B DNA MER1_type -988 74 1 502 306 61 25 chr17 4543979 4544066 -84960487 - MIR SINE MIR -144 118 36 227 191 32 32 chr17 4544228 4544291 -84960262 + CT-rich Low_complexity Low_complexity 1 63 0 956 275 53 77 chr17 4544591 4544849 -84959704 + L2 LINE L2 2702 2964 -349 2086 107 3 10 chr17 4544849 4545147 -84959406 + AluSx SINE Alu 1 296 -16 956 275 53 77 chr17 4545147 4545178 -84959375 + L2 LINE L2 2964 2994 -319 1776 111 96 4 chr17 4545178 4545448 -84959105 + AluSx SINE Alu 1 295 -17 956 275 53 77 chr17 4545448 4545702 -84958851 + L2 LINE L2 2994 3307 -6 394 243 59 52 chr17 4545766 4545902 -84958651 + MIR3 SINE MIR 12 148 -60 532 272 26 101 chr17 4545904 4546095 -84958458 + MIR SINE MIR 2 169 -93 2101 127 3 0 chr17 4546095 4546394 -84958159 + AluSx SINE Alu 1 300 -12 532 272 26 101 chr17 4546394 4546470 -84958083 + MIR SINE MIR 169 249 -13 457 258 8 32 chr17 4547152 4547276 -84957277 + MIR3 SINE MIR 7 127 -81 573 270 100 15 chr17 4547375 4547575 -84956978 + MIR SINE MIR 46 262 0 364 265 39 10 chr17 4547581 4547683 -84956870 + L3 LINE CR1 1399 1503 -74 199 111 44 0 chr17 4547864 4547909 -84956644 - L2 LINE L2 -212 3060 3014 2319 109 0 0 chr17 4548013 4548325 -84956228 + AluSq SINE Alu 1 312 -1 203 352 48 8 chr17 4548346 4548471 -84956082 - L2 LINE L2 -481 2833 2704 300 409 48 0 chr17 4548825 4549033 -84955520 + L1ME2 LINE L1 4572 4789 -1357 1073 273 74 34 chr17 4549196 4549716 -84954837 + L1ME2 LINE L1 5247 5802 -362 2261 100 0 0 chr17 4549716 4550015 -84954538 - AluSq SINE Alu -14 299 1 1073 273 74 34 chr17 4550015 4550112 -84954441 + L1ME2 LINE L1 5802 5894 -270 2016 102 3 56 chr17 4550147 4550470 -84954083 - AluSq SINE Alu -7 306 1 1587 179 3 14 chr17 4550479 4550622 -84953931 - AluJo SINE Alu -25 287 144 2304 99 0 0 chr17 4550622 4550926 -84953627 - AluSg1 SINE Alu -5 304 1 1587 179 3 14 chr17 4550926 4551072 -84953481 - AluJo SINE Alu -168 144 1 1887 112 63 0 chr17 4551101 4551386 -84953167 + AluSg SINE Alu 1 303 -7 520 189 24 0 chr17 4553782 4553909 -84950644 + (TCCA)n Simple_repeat Simple_repeat 3 132 0 181 299 112 28 chr17 4554122 4554229 -84950324 - MIR SINE MIR -72 136 21 258 250 21 31 chr17 4558370 4558466 -84946087 + CT-rich Low_complexity Low_complexity 5 99 0 213 219 183 0 chr17 4559413 4559495 -84945058 + MIR SINE MIR 21 117 -91 1712 136 19 30 chr17 4560461 4560498 -84944055 + LTR47A LTR ERVL 13 49 -403 2050 99 3 65 chr17 4560498 4560820 -84943733 - AluSx SINE Alu -10 302 1 1712 136 19 30 chr17 4560820 4561177 -84943376 + LTR47A LTR ERVL 49 452 0 2118 120 0 13 chr17 4561198 4561514 -84943039 - AluSx SINE Alu 0 312 1 1745 221 85 38 chr17 4561523 4562133 -84942420 - L1M4 LINE L1 -892 5254 4616 1931 148 3 0 chr17 4562162 4562460 -84942093 + AluSx SINE Alu 1 299 -13 261 0 0 0 chr17 4562493 4562522 -84942031 + (TA)n Simple_repeat Simple_repeat 2 30 0 2334 79 0 7 chr17 4562522 4562825 -84941728 - AluSc SINE Alu -8 301 1 705 215 77 127 chr17 4562825 4563230 -84941323 + MLT1G3 LTR MaLR 106 595 0 2056 108 0 26 chr17 4563307 4563612 -84940941 + AluSx SINE Alu 1 297 -15 1828 80 0 4 chr17 4563744 4563983 -84940570 + AluY SINE Alu 1 238 -73 234 0 0 0 chr17 4563986 4564012 -84940541 + (A)n Simple_repeat Simple_repeat 1 26 0 322 73 18 18 chr17 4564733 4564788 -84939765 + (TG)n Simple_repeat Simple_repeat 2 56 0 2078 111 10 3 chr17 4565138 4565436 -84939117 + AluSx SINE Alu 1 300 -12 2412 81 0 0 chr17 4565822 4566129 -84938424 - AluSx SINE Alu -5 307 1 945 304 84 35 chr17 4566129 4566643 -84937910 - L1MC4a LINE L1 -977 6831 6293 2182 99 0 3 chr17 4566645 4566939 -84937614 + AluSx SINE Alu 1 293 -19 790 270 43 13 chr17 4566942 4567175 -84937378 - L1MC4a LINE L1 -2001 5807 5568 568 212 150 16 chr17 4567178 4567371 -84937182 - L1MC4a LINE L1 -2258 5550 5332 2230 97 0 22 chr17 4567374 4567694 -84936859 - AluSp SINE Alu 0 313 1 204 125 0 0 chr17 4567716 4567748 -84936805 + (TG)n Simple_repeat Simple_repeat 2 33 0 1894 120 11 4 chr17 4567748 4568024 -84936529 - AluSx SINE Alu -34 278 1 1879 160 3 13 chr17 4568055 4568362 -84936191 + AluJb SINE Alu 1 304 -8 452 313 28 17 chr17 4568380 4568559 -84935994 + L2 LINE L2 2550 2730 -584 741 193 7 0 chr17 4568628 4568768 -84935785 - LTR64 LTR ERVK -415 143 3 214 254 73 0 chr17 4568874 4568929 -84935624 + L2 LINE L2 3148 3206 -66 2361 58 3 26 chr17 4568950 4569261 -84935292 - AluY SINE Alu -7 304 1 2072 106 3 7 chr17 4571157 4571460 -84933093 + AluSq SINE Alu 1 302 -11 24 32 0 0 chr17 4571484 4571515 -84933038 + AT_rich Low_complexity Low_complexity 1 31 0 2175 106 0 7 chr17 4571520 4571821 -84932732 - AluSq SINE Alu -14 299 1 1154 150 19 33 chr17 4571825 4571988 -84932565 - AluJo SINE Alu -18 294 130 233 0 62 0 chr17 4571988 4572020 -84932533 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2024 71 18 18 chr17 4572020 4572302 -84932251 - AluY SINE Alu -29 282 1 1154 150 19 33 chr17 4572302 4572350 -84932203 - AluJo SINE Alu -180 132 85 637 170 30 0 chr17 4572419 4572519 -84932034 - U6 snRNA snRNA -4 103 1 2026 125 0 0 chr17 4572625 4572922 -84931631 + AluSx SINE Alu 1 297 -15 2176 101 7 3 chr17 4572957 4573265 -84931288 + AluSg SINE Alu 1 309 -1 397 181 21 0 chr17 4573265 4573359 -84931194 + GA-rich Low_complexity Low_complexity 1 96 0 870 71 11 50 chr17 4573361 4573543 -84931010 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 505 285 85 41 chr17 4573553 4573848 -84930705 - HAL1 LINE L1 -84 2423 2116 897 300 98 23 chr17 4573899 4574390 -84930163 + MLT1G LTR MaLR 10 555 0 1666 236 83 48 chr17 4574391 4574934 -84929619 + L2 LINE L2 2381 2942 -372 2356 266 123 36 chr17 4574942 4576162 -84928391 - HAL1 LINE L1 -439 2068 743 1759 141 19 44 chr17 4576178 4576582 -84927971 - AluSp SINE Alu 0 396 1 240 261 11 45 chr17 4576598 4576686 -84927867 - HAL1 LINE L1 -1783 724 640 357 338 109 42 chr17 4576714 4577117 -84927436 - HAL1 LINE L1 -2076 431 2 379 296 23 38 chr17 4577261 4577393 -84927160 + MIR SINE MIR 133 262 0 181 263 0 0 chr17 4577780 4577818 -84926735 + MIR SINE MIR 42 79 -129 526 240 113 70 chr17 4577825 4578054 -84926499 + MIR SINE MIR 20 258 -4 2115 84 0 7 chr17 4578409 4578722 -84925831 - AluSq SINE Alu 0 313 3 2338 93 0 0 chr17 4578854 4579156 -84925397 - AluSx SINE Alu -10 302 1 1220 242 31 92 chr17 4579558 4580132 -84924421 + MER34 LTR ERV1 1 539 -3 2134 91 14 0 chr17 4581568 4581855 -84922698 - AluSp SINE Alu -22 291 1 1874 103 46 4 chr17 4582075 4582356 -84922197 + AluSq SINE Alu 1 293 -20 2382 89 0 6 chr17 4582509 4582822 -84921731 + AluSx SINE Alu 1 311 -1 29 0 0 0 chr17 4583198 4583227 -84921326 + AT_rich Low_complexity Low_complexity 1 29 0 2260 90 0 3 chr17 4583227 4583526 -84921027 + AluSq SINE Alu 1 298 -15 1252 151 5 23 chr17 4583696 4583914 -84920639 + AluJb SINE Alu 85 298 -14 231 188 0 0 chr17 4584027 4584075 -84920478 + GA-rich Low_complexity Low_complexity 4 51 0 614 237 132 26 chr17 4585133 4585323 -84919230 - MER63A DNA MER1_type 0 210 1 3652 128 11 5 chr17 4586311 4586864 -84917689 + L1PA15 LINE L1 5606 6161 -4 1079 145 0 31 chr17 4586962 4587155 -84917398 - AluSg/x SINE Alu -5 305 119 473 209 18 67 chr17 4587174 4587364 -84917189 - MER106B DNA MER1_type -5 1054 856 2008 84 4 0 chr17 4587364 4587625 -84916928 + AluSq SINE Alu 1 262 -51 225 0 0 0 chr17 4587627 4587652 -84916901 + (TAA)n Simple_repeat Simple_repeat 2 26 0 473 209 18 67 chr17 4587652 4587720 -84916833 - MER106B DNA MER1_type -204 855 1 2045 117 10 10 chr17 4587816 4588114 -84916439 + AluSx SINE Alu 1 298 -14 214 346 55 16 chr17 4589606 4589733 -84914820 + L2 LINE L2 3180 3311 -2 1633 139 17 50 chr17 4590076 4590378 -84914175 - AluJb SINE Alu -20 292 1 460 263 2 14 chr17 4590406 4590543 -84914010 - MIR SINE MIR -62 146 16 203 354 0 0 chr17 4593479 4593561 -84910992 + G-rich Low_complexity Low_complexity 6 87 0 262 139 0 0 chr17 4593981 4594024 -84910529 - MIR SINE MIR -9 253 211 195 220 0 0 chr17 4594720 4594770 -84909783 + (CACG)n Simple_repeat Simple_repeat 2 51 0 2089 97 3 32 chr17 4595349 4595659 -84908894 - AluSg SINE Alu -9 301 1 226 333 37 37 chr17 4595732 4595867 -84908686 + L2 LINE L2 3129 3263 -9 2174 119 0 0 chr17 4596058 4596370 -84908183 - AluSx SINE Alu 0 312 1 1318 268 106 34 chr17 4596505 4597056 -84907497 - L1MC4a LINE L1 -588 5563 5396 2223 102 0 3 chr17 4597056 4597361 -84907192 - AluSq SINE Alu -9 304 1 1318 268 106 34 chr17 4597361 4597381 -84907172 - L1MC4a LINE L1 -755 5396 5379 621 221 40 137 chr17 4597577 4597703 -84906850 + MLT1F-int LTR MaLR 1078 1215 -156 2124 113 10 0 chr17 4597703 4598004 -84906549 + AluSq SINE Alu 3 306 -7 621 221 40 137 chr17 4598004 4598198 -84906355 + MLT1F-int LTR MaLR 1215 1367 -4 1613 217 36 74 chr17 4598204 4598651 -84905902 + MLT1F LTR MaLR 2 431 -111 1061 191 11 0 chr17 4598677 4598866 -84905687 - AluJb SINE Alu -8 304 114 2057 112 0 19 chr17 4598994 4599328 -84905225 - AluSx SINE Alu 0 312 3 1601 171 27 13 chr17 4599854 4599978 -84904575 + AluJo SINE Alu 3 124 -188 2208 107 0 3 chr17 4599978 4600286 -84904267 + AluSx SINE Alu 1 307 -5 1601 171 27 13 chr17 4600286 4600459 -84904094 + AluJo SINE Alu 124 304 -8 2151 88 14 10 chr17 4600529 4600826 -84903727 + AluSx SINE Alu 1 298 -14 1113 174 19 31 chr17 4601389 4601679 -84902874 - MER89 LTR ERV1 -170 389 1 773 201 41 106 chr17 4601679 4601972 -84902581 - L1ME LINE L1 -628 5538 5265 758 83 0 0 chr17 4602121 4602217 -84902336 + AluSc SINE Alu 201 296 -13 23 0 0 0 chr17 4603139 4603162 -84901391 + AT_rich Low_complexity Low_complexity 1 23 0 205 276 0 26 chr17 4604008 4604084 -84900469 + (TG)n Simple_repeat Simple_repeat 1 74 0 230 274 0 0 chr17 4608875 4608937 -84895616 + C-rich Low_complexity Low_complexity 6 67 0 2063 92 0 27 chr17 4609930 4610222 -84894331 - AluSg SINE Alu -26 284 1 1974 133 10 0 chr17 4610710 4611004 -84893549 - AluSg SINE Alu -13 297 1 271 317 125 0 chr17 4611457 4611577 -84892976 + MIR SINE MIR 95 229 -33 200 184 0 0 chr17 4612592 4612630 -84891923 + (GGCTG)n Simple_repeat Simple_repeat 4 41 0 2061 104 9 35 chr17 4613292 4613610 -84890943 + AluSq SINE Alu 1 310 -3 241 242 13 41 chr17 4614491 4614603 -84889950 + MIR SINE MIR 10 114 -94 * 311 349 61 28 chr17 4614586 4614798 -84889755 - MIR SINE MIR -3 259 41 744 156 0 0 chr17 4614825 4614934 -84889619 - FRAM SINE Alu -58 118 10 2310 92 0 0 chr17 4615224 4615519 -84889034 + AluSq SINE Alu 1 295 -18 2018 109 46 0 chr17 4616635 4616919 -84887634 - AluSx SINE Alu -15 297 1 198 208 21 21 chr17 4616990 4617038 -84887515 - MIR SINE MIR -186 76 29 1192 234 72 16 chr17 4617221 4617528 -84887025 + MER33 DNA MER1_type 1 324 0 320 311 116 66 chr17 4619490 4619792 -84884761 - L2 LINE L2 0 3313 2997 558 300 191 10 chr17 4619917 4620304 -84884249 - L2 LINE L2 -537 2777 2321 2282 89 0 7 chr17 4621109 4621413 -84883140 - AluSq SINE Alu -11 302 1 1688 186 0 0 chr17 4621414 4621723 -84882830 - AluJo SINE Alu 0 312 2 992 248 66 106 chr17 4624952 4625327 -84879226 + L1ME3A LINE L1 5690 6042 -128 2210 103 6 10 chr17 4625327 4625639 -84878914 - AluSq SINE Alu -2 311 1 992 248 66 106 chr17 4625639 4625764 -84878789 + L1ME3A LINE L1 6042 6170 0 359 299 86 0 chr17 4625891 4626008 -84878545 - MER5A DNA MER1_type -4 185 59 612 323 50 0 chr17 4626749 4626969 -84877584 + MIR SINE MIR 26 256 -6 213 39 0 0 chr17 4627041 4627067 -84877486 + (CA)n Simple_repeat Simple_repeat 1 26 0 215 227 0 0 chr17 4627089 4627133 -84877420 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 634 241 59 18 chr17 4627134 4627304 -84877249 + MER5B DNA MER1_type 2 178 0 202 254 8 164 chr17 4627317 4627439 -84877114 + MER5B DNA MER1_type 17 119 -59 2225 104 0 3 chr17 4627446 4627744 -84876809 - AluSq SINE Alu -16 297 1 372 253 0 0 chr17 4628068 4628151 -84876402 - ERVL LTR ERVL -3757 2007 1925 824 77 0 0 chr17 4628160 4628264 -84876289 - AluSg/x SINE Alu -10 300 197 548 293 95 31 chr17 4628301 4628436 -84876117 + HERVL LTR ERVL 2333 2458 -3196 2091 94 18 0 chr17 4628436 4628795 -84875758 - AluSx SINE Alu 0 364 1 548 293 95 31 chr17 4628795 4628843 -84875710 + HERVL LTR ERVL 2458 2501 -3153 2217 121 0 0 chr17 4628843 4629148 -84875405 - AluSx SINE Alu -7 305 1 548 293 95 31 chr17 4629148 4629256 -84875297 + HERVL LTR ERVL 2501 2645 -3009 572 259 30 55 chr17 4629281 4629517 -84875036 + LTR67 LTR ERVL 328 557 0 2171 93 43 10 chr17 4630030 4630332 -84874221 - AluSx SINE Alu 0 312 1 207 0 0 0 chr17 4630342 4630365 -84874188 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1367 94 0 6 chr17 4630387 4630568 -84873985 - AluSp SINE Alu -133 180 1 1504 213 94 43 chr17 4630642 4631154 -84873399 - LTR55 LTR ERV -10 538 1 1622 175 11 0 chr17 4631304 4631573 -84872980 - AluJo SINE Alu -4 308 37 2062 140 3 13 chr17 4631610 4631925 -84872628 - AluSx SINE Alu 0 312 1 2221 108 0 3 chr17 4632092 4632397 -84872156 - AluSx SINE Alu -5 307 4 265 143 200 0 chr17 4632424 4632494 -84872059 - MER105 DNA DNA 0 204 121 2108 107 3 10 chr17 4632890 4633189 -84871364 + AluSx SINE Alu 3 299 -13 649 268 49 0 chr17 4633220 4633444 -84871109 + L1MB2 LINE L1 5936 6170 -1 282 56 0 0 chr17 4633586 4633622 -84870931 + (TG)n Simple_repeat Simple_repeat 1 36 0 775 172 8 0 chr17 4634272 4634394 -84870159 - FLAM_C SINE Alu -18 125 3 210 37 0 0 chr17 4634425 4634452 -84870101 + (TA)n Simple_repeat Simple_repeat 1 27 0 2327 82 0 0 chr17 4634452 4634746 -84869807 - AluSg SINE Alu -16 294 1 23 33 0 0 chr17 4636367 4636397 -84868156 + AT_rich Low_complexity Low_complexity 1 30 0 2420 222 65 29 chr17 4636464 4637053 -84867500 - L1ME1 LINE L1 -108 6058 5435 795 88 0 0 chr17 4637053 4637166 -84867387 + (TG)n Simple_repeat Simple_repeat 2 114 0 2420 222 65 29 chr17 4637166 4637324 -84867229 - L1ME1 LINE L1 -731 5435 5284 819 149 0 0 chr17 4637324 4637458 -84867095 - AluSp/q SINE Alu -5 308 175 270 0 0 0 chr17 4638276 4638306 -84866247 + (TG)n Simple_repeat Simple_repeat 1 30 0 526 190 0 74 chr17 4638307 4638478 -84866075 - MIR SINE MIR -26 236 82 1585 115 27 103 chr17 4638993 4639324 -84865229 + AluYb8 SINE Alu 4 309 -9 206 264 217 39 chr17 4640221 4640350 -84864203 - L2 LINE L2 -219 3053 2902 2265 92 3 0 chr17 4690875 4691180 -84813373 - AluY SINE Alu -5 306 1 29 0 0 0 chr17 4691250 4691279 -84813274 + AT_rich Low_complexity Low_complexity 1 29 0 579 157 10 0 chr17 4691361 4691463 -84813090 - AluJb SINE Alu 0 312 210 720 155 0 0 chr17 4691631 4691734 -84812819 - FRAM SINE Alu -37 139 37 451 93 0 13 chr17 4691734 4691809 -84812744 + L1M4 LINE L1 5415 5488 -690 2022 128 7 3 chr17 4691809 4692107 -84812446 + AluSx SINE Alu 1 299 -13 848 142 8 0 chr17 4692117 4692251 -84812302 + AluJb SINE Alu 1 135 -177 2172 99 14 3 chr17 4692251 4692544 -84812009 + AluSg SINE Alu 1 296 -14 363 149 15 0 chr17 4692992 4693059 -84811494 - AluJ/FLAM SINE Alu -230 72 5 849 178 33 75 chr17 4693102 4693141 -84811412 - MIR SINE MIR -35 227 188 2321 83 3 0 chr17 4693141 4693441 -84811112 - AluSx SINE Alu -11 301 1 849 178 33 75 chr17 4693441 4693615 -84810938 - MIR SINE MIR -74 188 23 1550 98 5 0 chr17 4694014 4694219 -84810334 + AluSx SINE Alu 1 206 -106 800 196 0 18 chr17 4695726 4695889 -84808664 - AluSq SINE Alu -153 160 1 253 302 113 19 chr17 4695895 4696001 -84808552 - MIR3 SINE MIR -33 175 60 356 301 30 23 chr17 4697094 4697227 -84807326 - MIR SINE MIR -116 146 13 1358 132 0 18 chr17 4698500 4698720 -84805833 - AluSq SINE Alu -9 304 89 1100 107 153 11 chr17 4698721 4698898 -84805655 - AluSx SINE Alu -56 256 55 1343 77 0 11 chr17 4699005 4699187 -84805366 + AluY SINE Alu 127 306 -5 783 167 13 0 chr17 4699190 4699340 -84805213 - L1M4 LINE L1 -1254 4892 4741 290 47 47 0 chr17 4699341 4699384 -84805169 + (TTTTC)n Simple_repeat Simple_repeat 4 48 0 2144 110 10 0 chr17 4699398 4699698 -84804855 - AluSg SINE Alu -7 303 1 1885 183 23 76 chr17 4699698 4699930 -84804623 - L1M4 LINE L1 -1657 4489 4246 1731 107 133 0 chr17 4699930 4700193 -84804360 - AluSg SINE Alu -2 298 1 1885 183 23 76 chr17 4700193 4700529 -84804024 - L1M4 LINE L1 -1900 4246 3951 1036 160 59 0 chr17 4700542 4700729 -84803824 - AluSg/x SINE Alu -1 309 112 525 148 0 12 chr17 4700832 4700913 -84803640 + AluSg/x SINE Alu 214 293 -17 2466 62 0 0 chr17 4700917 4701222 -84803331 + AluY SINE Alu 1 305 -6 445 276 41 8 chr17 4701466 4701589 -84802964 - MIR3 SINE MIR -17 191 65 262 226 21 75 chr17 4702175 4702268 -84802285 + GA-rich Low_complexity Low_complexity 3 90 0 2456 34 3 10 chr17 4703961 4704257 -84800296 + AluY SINE Alu 3 296 -15 1011 70 0 0 chr17 4705207 4705336 -84799217 + AluY SINE Alu 163 291 -20 1026 243 27 0 chr17 4707006 4707265 -84797288 - MER58B DNA MER1_type 0 341 76 334 154 31 0 chr17 4707265 4707330 -84797223 + AluJ/FLAM SINE Alu 1 67 -235 866 169 0 7 chr17 4707430 4707566 -84796987 - AluJo SINE Alu -129 183 49 897 161 0 0 chr17 4707570 4707713 -84796840 + AluJb SINE Alu 164 306 -6 4818 96 0 85 chr17 4707741 4708049 -84796504 + LTR8 LTR ERV1 1 334 -357 2305 85 7 0 chr17 4708049 4708356 -84796197 + AluSx SINE Alu 3 311 -1 4818 96 0 85 chr17 4708356 4708801 -84795752 + LTR8 LTR ERV1 334 690 -1 1065 79 11 96 chr17 4709117 4709295 -84795258 - AluSx SINE Alu -10 300 138 2554 43 0 3 chr17 4711589 4711893 -84792660 + AluY SINE Alu 1 303 -8 943 61 0 0 chr17 4712121 4712236 -84792317 - AluSx SINE Alu -173 139 25 1510 107 0 30 chr17 4713075 4713308 -84791245 + AluSg/x SINE Alu 87 312 0 2081 126 0 3 chr17 4713997 4714306 -84790247 + AluSx SINE Alu 1 308 -4 427 76 0 51 chr17 4715242 4715312 -84789241 + Alu SINE Alu 233 305 -7 2495 43 0 10 chr17 4715312 4715616 -84788937 + AluY SINE Alu 1 301 -10 615 148 157 0 chr17 4715618 4715733 -84788820 + FLAM_C SINE Alu 1 133 0 2074 108 10 3 chr17 4715738 4716034 -84788519 + AluSp SINE Alu 1 298 -15 2178 98 0 7 chr17 4716041 4716336 -84788217 + AluSq SINE Alu 1 293 -20 208 303 13 13 chr17 4716485 4716561 -84787992 + L2 LINE L2 3016 3091 -181 2273 66 0 10 chr17 4716749 4717063 -84787490 + AluSx SINE Alu 1 311 0 1697 135 13 50 chr17 4717203 4717506 -84787047 + AluJo SINE Alu 1 292 -20 327 344 26 20 chr17 4717577 4717728 -84786825 + L2 LINE L2 3150 3301 -12 2295 86 0 3 chr17 4717787 4718088 -84786465 + AluSc SINE Alu 1 300 -9 182 296 155 0 chr17 4718088 4718159 -84786394 - MIR SINE MIR -116 146 65 1036 208 13 22 chr17 4718159 4718390 -84786163 + AluJo SINE Alu 71 299 -13 1865 125 4 4 chr17 4718397 4718678 -84785875 + AluY SINE Alu 5 285 -26 31 0 0 0 chr17 4718678 4718709 -84785844 + AT_rich Low_complexity Low_complexity 1 31 0 927 142 0 0 chr17 4718741 4718882 -84785671 - AluJb SINE Alu -4 308 168 2088 85 0 4 chr17 4719003 4719274 -84785279 - AluSg SINE Alu -40 270 1 2203 87 0 31 chr17 4719287 4719608 -84784945 - AluY SINE Alu 0 311 1 928 95 0 29 chr17 4719800 4719937 -84784616 - AluSq/x SINE Alu -180 133 1 210 214 31 133 chr17 4722812 4722862 -84781691 + L2 LINE L2 2971 3008 -264 2275 77 3 3 chr17 4722862 4723161 -84781392 - AluSp SINE Alu -14 299 1 210 214 31 133 chr17 4723161 4723208 -84781345 + L2 LINE L2 3008 3058 -214 540 170 0 0 chr17 4723226 4723320 -84781233 - AluJ/FRAM SINE Alu -3 309 216 435 293 60 20 chr17 4723377 4723527 -84781026 + L2 LINE L2 3117 3272 0 268 360 82 19 chr17 4723645 4723912 -84780641 - L3b LINE CR1 -196 1387 1104 2305 100 3 0 chr17 4725007 4725316 -84779237 + AluSx SINE Alu 1 310 -2 279 0 0 0 chr17 4726240 4726271 -84778282 + (A)n Simple_repeat Simple_repeat 1 31 0 2216 97 3 3 chr17 4726288 4726587 -84777966 + AluSc SINE Alu 2 300 -9 232 103 0 0 chr17 4727014 4727053 -84777500 + L1M2 LINE L1 5742 5780 -520 858 171 0 38 chr17 4727055 4727213 -84777340 + FRAM SINE Alu 1 152 -24 2316 102 0 6 chr17 4727224 4727538 -84777015 + AluSx SINE Alu 1 312 0 2021 181 8 31 chr17 4727554 4727809 -84776744 + L1PB4 LINE L1 5785 6030 -126 2138 95 27 0 chr17 4727809 4728103 -84776450 + AluSx SINE Alu 1 302 -10 2021 181 8 31 chr17 4728103 4728228 -84776325 + L1PB4 LINE L1 6030 6156 0 448 225 0 0 chr17 4728247 4728327 -84776226 + AluJ/FLAM SINE Alu 5 84 -228 337 308 0 54 chr17 4728462 4728647 -84775906 + C-rich Low_complexity Low_complexity 2 176 0 275 293 20 14 chr17 4728709 4728856 -84775697 + CT-rich Low_complexity Low_complexity 1 148 0 309 100 0 0 chr17 4729242 4729292 -84775261 + (CAG)n Simple_repeat Simple_repeat 3 52 0 297 75 0 0 chr17 4729822 4729862 -84774691 + (CA)n Simple_repeat Simple_repeat 2 41 0 321 309 118 22 chr17 4730592 4730728 -84773825 + MIR SINE MIR 40 188 -74 341 83 133 0 chr17 4731710 4731770 -84772783 - AluS SINE Alu -235 68 1 671 148 16 41 chr17 4731810 4731932 -84772621 + FLAM_C SINE Alu 11 129 -14 1977 128 27 3 chr17 4731963 4732259 -84772294 + AluSx SINE Alu 1 303 -9 1610 179 18 4 chr17 4732816 4733126 -84771427 - AluJb SINE Alu 0 314 1 2037 116 3 3 chr17 4733138 4733454 -84771099 - AluSx SINE Alu 0 316 1 1818 145 0 26 chr17 4733457 4733767 -84770786 - AluSx SINE Alu -10 302 1 241 216 39 0 chr17 4733782 4733833 -84770720 - MER66A LTR ERV1 -143 335 283 2551 203 71 50 chr17 4733867 4733909 -84770644 + L1MC4 LINE L1 7181 7221 -821 2129 81 7 42 chr17 4733909 4734217 -84770336 + AluSq SINE Alu 1 297 -16 2551 203 71 50 chr17 4734217 4735017 -84769536 + L1MC4 LINE L1 7221 8041 -1 1573 180 13 28 chr17 4735089 4735406 -84769147 - AluJb SINE Alu 0 312 1 321 341 40 8 chr17 4735846 4735972 -84768581 - MIR SINE MIR -59 149 20 2006 111 7 0 chr17 4740961 4741264 -84763289 + AluSx SINE Alu 1 305 0 379 298 118 0 chr17 4742132 4742293 -84762260 + MIR SINE MIR 57 236 -26 666 277 43 77 chr17 4742329 4742510 -84762043 + L2 LINE L2 3021 3190 -123 2070 108 0 29 chr17 4742510 4742816 -84761737 + AluSx SINE Alu 1 297 -15 666 277 43 77 chr17 4742816 4742934 -84761619 + L2 LINE L2 3190 3310 -3 2269 99 0 6 chr17 4744209 4744523 -84760030 + AluSx SINE Alu 1 312 0 681 224 105 53 chr17 4744651 4744879 -84759674 - MIR SINE MIR 0 262 23 2318 98 7 0 chr17 4745010 4745316 -84759237 - AluSx SINE Alu -4 308 1 1222 163 26 13 chr17 4745857 4746084 -84758469 - L1MB3 LINE L1 -1 6182 5953 2042 102 3 24 chr17 4746654 4746949 -84757604 - AluSx SINE Alu -15 297 9 827 204 7 0 chr17 4747697 4747849 -84756704 - FRAM SINE Alu -23 153 1 324 0 0 0 chr17 4748246 4748282 -84756271 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 819 152 65 0 chr17 4748282 4748420 -84756133 - AluSq SINE Alu -32 281 135 715 187 16 0 chr17 4748916 4749039 -84755514 + FLAM_C SINE Alu 1 125 -18 180 200 0 0 chr17 4749051 4749091 -84755462 + GA-rich Low_complexity Low_complexity 1 40 0 354 206 109 11 chr17 4749286 4749378 -84755175 + MIR SINE MIR 24 124 -138 2422 52 0 0 chr17 4749389 4749676 -84754877 - AluY SINE Alu -24 287 1 935 96 0 22 chr17 4749679 4749815 -84754738 - AluSq SINE Alu -180 133 1 418 198 62 0 chr17 4749816 4749912 -84754641 + MIR SINE MIR 113 214 -48 2010 64 8 0 chr17 4750444 4750694 -84753859 - AluSp SINE Alu -61 252 1 919 115 0 8 chr17 4750695 4750825 -84753728 - AluSq/x SINE Alu -183 129 1 1973 143 20 0 chr17 4750833 4751133 -84753420 - AluSx SINE Alu -6 306 1 421 93 0 53 chr17 4751133 4751208 -84753345 - MLT2C2 LTR ERVL -393 71 1 554 143 0 0 chr17 4751270 4751361 -84753192 + FLAM_C SINE Alu 51 141 -2 455 142 19 47 chr17 4751368 4751474 -84753079 + L1MDa LINE L1 1 103 -6437 1047 177 21 0 chr17 4751474 4751660 -84752893 + AluSg/x SINE Alu 120 309 -1 1399 173 24 45 chr17 4751680 4751993 -84752560 + MLT2D LTR ERVL 62 369 -45 183 100 0 0 chr17 4751993 4752023 -84752530 + (TG)n Simple_repeat Simple_repeat 2 31 0 1399 173 24 45 chr17 4752023 4752044 -84752509 + MLT2D LTR ERVL 369 389 -25 933 129 58 7 chr17 4752044 4752199 -84752354 - AluJb SINE Alu -36 276 114 1605 173 61 0 chr17 4752236 4752514 -84752039 - AluJb SINE Alu -17 295 1 536 343 29 0 chr17 4752592 4752767 -84751786 - L1M4 LINE L1 -3532 2614 2435 1396 224 94 34 chr17 4752772 4753243 -84751310 - MLT1D LTR MaLR -4 488 1 225 304 43 0 chr17 4753246 4753407 -84751146 - L1M4 LINE L1 -3708 2438 2271 2057 95 41 10 chr17 4753411 4753706 -84750847 - AluSq SINE Alu -7 306 3 26 50 0 0 chr17 4753974 4754014 -84750539 + GC_rich Low_complexity Low_complexity 1 40 0 2223 76 0 7 chr17 4758532 4758820 -84745733 - AluSc SINE Alu -23 286 1 969 159 0 69 chr17 4758836 4759025 -84745528 - FRAM SINE Alu 0 176 1 397 231 58 70 chr17 4759027 4759183 -84745370 - MER5A DNA MER1_type 0 189 36 1707 166 3 3 chr17 4759603 4759892 -84744661 - AluJb SINE Alu -23 289 1 2255 105 0 0 chr17 4759897 4760202 -84744351 - AluSx SINE Alu -7 305 1 337 313 43 0 chr17 4760208 4760371 -84744182 - L1ME4a LINE L1 -2 6119 5950 237 257 0 59 chr17 4761243 4761395 -84743158 + G-rich Low_complexity Low_complexity 5 147 0 483 323 127 26 chr17 4763140 4763168 -84741385 + L2 LINE L2 1685 1709 -1605 2226 71 17 14 chr17 4763168 4763463 -84741090 + AluSp SINE Alu 1 296 -17 483 323 127 26 chr17 4763463 4763861 -84740692 + L2 LINE L2 1709 2154 -1160 1058 106 0 0 chr17 4763864 4764005 -84740548 - AluSq/x SINE Alu -170 142 2 841 291 21 21 chr17 4764006 4764295 -84740258 + L2 LINE L2 2152 2440 -874 455 308 44 60 chr17 4764607 4764640 -84739913 + L2 LINE L2 2550 2582 -690 1650 99 0 4 chr17 4764640 4764873 -84739680 - AluSg/x SINE Alu 0 312 81 1564 157 7 18 chr17 4764875 4765149 -84739404 - AluJo SINE Alu -41 271 1 455 308 44 60 chr17 4765149 4765304 -84739249 + L2 LINE L2 2583 2739 -533 1956 127 3 7 chr17 4765304 4765604 -84738949 + AluSq SINE Alu 1 299 -14 455 308 44 60 chr17 4765604 4765871 -84738682 + L2 LINE L2 2739 3076 -196 1185 124 119 0 chr17 4766194 4766396 -84738157 - AluSc SINE Alu -13 296 71 1941 117 4 0 chr17 4766397 4766670 -84737883 - AluSp SINE Alu -39 274 1 411 209 0 0 chr17 4766846 4766913 -84737640 + AluJb SINE Alu 200 266 -46 2307 95 3 0 chr17 4766925 4767231 -84737322 - AluSx SINE Alu -5 307 1 2248 106 3 0 chr17 4767559 4767870 -84736683 - AluSx SINE Alu 0 312 1 188 143 24 0 chr17 4768026 4768068 -84736485 + CT-rich Low_complexity Low_complexity 5 47 0 670 91 0 0 chr17 4768510 4768598 -84735955 - AluS SINE Alu -225 88 1 839 183 0 0 chr17 4768621 4768763 -84735790 - FLAM_C SINE Alu -1 142 1 982 154 5 53 chr17 4768777 4768965 -84735588 - AluSg/x SINE Alu 0 312 134 2517 44 0 0 chr17 4768965 4769263 -84735290 - AluY SINE Alu -9 302 5 260 207 52 60 chr17 4769524 4769640 -84734913 - MLT1K LTR MaLR -286 302 188 2219 94 0 0 chr17 4769762 4770050 -84734503 + AluSx SINE Alu 14 301 -11 1943 141 13 3 chr17 4770619 4770918 -84733635 - AluSx SINE Alu -10 302 1 1627 171 3 27 chr17 4770940 4771103 -84733450 - AluJb SINE Alu -20 292 138 2293 86 3 7 chr17 4771103 4771115 -84733438 - AluSp SINE Alu -12 301 290 189 74 0 0 chr17 4771115 4771142 -84733411 + (TA)n Simple_repeat Simple_repeat 1 27 0 2293 86 3 7 chr17 4771142 4771431 -84733122 - AluSp SINE Alu -23 290 1 1627 171 3 27 chr17 4771431 4771566 -84732987 - AluJb SINE Alu -174 138 1 238 53 0 0 chr17 4771678 4771716 -84732837 + Alu SINE Alu 258 295 -8 1284 96 6 6 chr17 4771775 4771952 -84732601 - AluSq SINE Alu -136 177 1 2252 95 0 0 chr17 4773695 4773991 -84730562 - AluY SINE Alu -15 296 1 2202 91 0 7 chr17 4773991 4774287 -84730266 - AluSc SINE Alu -15 294 1 2191 104 0 3 chr17 4775269 4775568 -84728985 - AluSx SINE Alu -14 298 1 344 268 39 4 chr17 4776368 4776604 -84727949 + (TCCA)n Simple_repeat Simple_repeat 1 244 0 336 303 100 65 chr17 4777483 4777803 -84726750 + L1ME LINE L1 5255 5440 -722 2053 122 3 0 chr17 4777803 4778090 -84726463 - AluSx SINE Alu -24 288 1 336 303 100 65 chr17 4778090 4778247 -84726306 + L1ME LINE L1 5440 5590 -572 2102 128 0 0 chr17 4778358 4778642 -84725911 + AluSx SINE Alu 1 287 -25 195 69 0 0 chr17 4778642 4778671 -84725882 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 2102 128 0 0 chr17 4778671 4778683 -84725870 + AluSx SINE Alu 286 297 -15 675 256 0 55 chr17 4778876 4779075 -84725478 - L1ME2 LINE L1 -52 6112 5925 2183 120 0 0 chr17 4779075 4779384 -84725169 + AluSc SINE Alu 1 309 0 1199 111 0 0 chr17 4779384 4779546 -84725007 + AluSq SINE Alu 134 295 -18 1414 170 33 33 chr17 4779553 4779853 -84724700 + AluJb SINE Alu 1 300 -12 188 301 193 42 chr17 4779897 4780090 -84724463 + L2 LINE L2 3026 3255 -17 2115 62 87 3 chr17 4780090 4780379 -84724174 + AluSq SINE Alu 1 313 0 188 301 193 42 chr17 4780379 4780398 -84724155 + L2 LINE L2 3255 3270 -2 2255 99 0 0 chr17 4781002 4781305 -84723248 - AluSq SINE Alu -10 303 1 1731 157 48 0 chr17 4782674 4782968 -84721585 + AluJo SINE Alu 1 308 -4 23 0 0 0 chr17 4784106 4784129 -84720424 + GC_rich Low_complexity Low_complexity 1 23 0 36 77 0 0 chr17 4784515 4784593 -84719960 + GC_rich Low_complexity Low_complexity 1 78 0 21 57 0 0 chr17 4784623 4784658 -84719895 + GC_rich Low_complexity Low_complexity 1 35 0 25 75 0 0 chr17 4784840 4784893 -84719660 + GC_rich Low_complexity Low_complexity 1 53 0 373 308 117 0 chr17 4785058 4785178 -84719375 - L2 LINE L2 -1 3312 3179 1213 223 72 5 chr17 4785231 4785649 -84718904 - L1ME2 LINE L1 -393 5771 5326 1326 117 187 44 chr17 4785651 4785696 -84718857 - AluJb SINE Alu 0 312 275 2420 60 0 7 chr17 4785696 4785998 -84718555 - AluY SINE Alu -11 300 1 1326 117 187 44 chr17 4785998 4786225 -84718328 - AluJb SINE Alu -37 275 1 2153 70 35 3 chr17 4786234 4786519 -84718034 - AluSp SINE Alu -19 294 1 844 220 9 51 chr17 4786520 4786778 -84717775 + L1ME2 LINE L1 5926 6334 0 1948 104 56 3 chr17 4786784 4787072 -84717481 + AluSc SINE Alu 1 303 -6 2432 77 0 0 chr17 4787164 4787475 -84717078 + AluY SINE Alu 1 311 0 2001 135 0 0 chr17 4787646 4787942 -84716611 + AluSx SINE Alu 1 296 -16 2468 65 0 7 chr17 4787942 4788251 -84716302 + AluY SINE Alu 1 307 -4 434 250 11 107 chr17 4788293 4788449 -84716104 + MIR SINE MIR 34 162 -100 2149 102 3 7 chr17 4788449 4788744 -84715809 + AluSx SINE Alu 1 294 -18 434 250 11 107 chr17 4788744 4788821 -84715732 + MIR SINE MIR 162 245 -17 824 202 5 58 chr17 4789562 4789639 -84714914 - MER45A DNA AcHobo -1403 178 98 2231 82 10 0 chr17 4789639 4789932 -84714621 + AluY SINE Alu 1 296 -15 824 202 5 58 chr17 4789932 4790042 -84714511 - MER45A DNA AcHobo -1483 98 1 720 298 57 32 chr17 4790768 4791083 -84713470 - L2 LINE L2 -17 3296 2974 887 187 22 39 chr17 4791083 4791251 -84713302 + L1MC1 LINE L1 6155 6324 -9 2252 94 0 7 chr17 4791251 4791550 -84713003 + AluSx SINE Alu 1 297 -15 1963 103 4 0 chr17 4791550 4791813 -84712740 + AluSp SINE Alu 38 301 -12 887 187 22 39 chr17 4791813 4791825 -84712728 + L1MC1 LINE L1 6322 6333 0 1381 187 37 23 chr17 4791826 4791953 -84712600 + AluJo SINE Alu 1 125 -187 2104 138 0 0 chr17 4791953 4792265 -84712288 + AluSx SINE Alu 1 312 0 1381 187 37 23 chr17 4792265 4792437 -84712116 + AluJo SINE Alu 125 304 -8 2276 93 0 3 chr17 4794335 4794636 -84709917 - AluSx SINE Alu -12 300 1 1927 66 0 4 chr17 4795727 4795970 -84708583 + AluSg SINE Alu 32 273 -37 190 0 0 62 chr17 4795974 4796006 -84708547 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1713 175 13 34 chr17 4796106 4796529 -84708024 - L1M4 LINE L1 -507 5667 5254 792 151 22 29 chr17 4796556 4796695 -84707858 - FRAM SINE Alu -38 138 1 2793 12 0 6 chr17 4796700 4797020 -84707533 - AluYb8 SINE Alu 0 318 1 1801 98 0 8 chr17 4797039 4797284 -84707269 - AluSx SINE Alu -69 243 1 500 193 40 13 chr17 4797285 4797435 -84707118 - L1M4 LINE L1 -838 5308 5155 860 49 0 0 chr17 4797536 4797638 -84706915 - AluS SINE Alu -210 102 1 1842 86 12 4 chr17 4798078 4798335 -84706218 + AluSq SINE Alu 47 305 -8 21 0 0 0 chr17 4798533 4798554 -84705999 + GC_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr17 4798621 4798649 -84705904 + GC_rich Low_complexity Low_complexity 1 28 0 1617 149 76 4 chr17 4801266 4801541 -84703012 - AluJb SINE Alu -17 295 1 412 267 104 54 chr17 4801616 4801840 -84702713 - MIR3 SINE MIR -6 256 7 627 252 129 31 chr17 4802997 4803291 -84701262 - MER102b DNA MER1_type 0 341 19 240 226 0 0 chr17 4803580 4803642 -84700911 + CT-rich Low_complexity Low_complexity 2 63 0 290 229 9 48 chr17 4806259 4806364 -84698189 + MER113 DNA MER1_type? 4 104 -417 2383 77 0 0 chr17 4806371 4806668 -84697885 - AluSg SINE Alu -13 297 1 361 283 94 11 chr17 4806682 4806893 -84697660 - L1MC5 LINE L1 -12 7927 7545 2195 101 13 7 chr17 4806915 4807222 -84697331 - AluSx SINE Alu -3 309 1 2145 119 0 6 chr17 4808197 4808509 -84696044 - AluY SINE Alu -1 310 1 832 229 28 17 chr17 4808523 4808702 -84695851 + AluJb SINE Alu 131 311 -1 2253 107 10 0 chr17 4808723 4809032 -84695521 + AluSp SINE Alu 1 312 -1 299 128 0 0 chr17 4809474 4809521 -84695032 + AluSp/q SINE Alu 204 250 -53 1087 147 17 60 chr17 4809521 4809753 -84694800 + AluJo SINE Alu 85 306 -6 2301 74 0 0 chr17 4809768 4810051 -84694502 + AluSx SINE Alu 13 295 -17 441 339 23 6 chr17 4810071 4810242 -84694311 - MLT1K LTR MaLR -282 306 133 199 322 17 107 chr17 4810391 4810476 -84694077 - MIR SINE MIR -27 235 144 336 48 0 0 chr17 4810476 4810518 -84694035 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 199 322 17 107 chr17 4810518 4810545 -84694008 - MIR SINE MIR -118 144 116 2127 113 0 0 chr17 4810545 4810852 -84693701 - AluSq SINE Alu 0 309 3 199 322 17 107 chr17 4810852 4810914 -84693639 - MIR SINE MIR -146 116 75 1948 152 3 25 chr17 4812003 4812188 -84692365 - AluJb SINE Alu -4 308 120 2265 100 3 0 chr17 4812188 4812499 -84692054 - AluSx SINE Alu 0 312 1 1948 152 3 25 chr17 4812499 4812529 -84692024 - AluJb SINE Alu -191 121 2 703 133 0 0 chr17 4812529 4812627 -84691926 - AluJ/FLAM SINE Alu -213 99 2 2167 94 30 17 chr17 4813233 4813531 -84691022 + AluSx SINE Alu 5 306 -6 339 318 28 0 chr17 4813626 4813733 -84690820 + L2 LINE L2 3197 3306 -7 619 148 0 19 chr17 4813755 4813863 -84690690 + FRAM SINE Alu 62 167 -9 2422 103 3 0 chr17 4813921 4814231 -84690322 + AluSp SINE Alu 1 311 -2 302 340 139 15 chr17 4814266 4814556 -84689997 - L2 LINE L2 -239 3074 2741 2416 64 0 20 chr17 4814558 4814854 -84689699 - AluY SINE Alu -16 295 6 1885 230 96 45 chr17 4814900 4815157 -84689396 - L1ME3A LINE L1 -5 6165 5923 2163 84 24 14 chr17 4815157 4815444 -84689109 - AluSx SINE Alu -22 290 1 1885 230 96 45 chr17 4815444 4815583 -84688970 - L1ME3A LINE L1 -247 5923 5793 2311 124 0 6 chr17 4815583 4815897 -84688656 - AluSx SINE Alu 0 312 1 1885 230 96 45 chr17 4815897 4816124 -84688429 - L1ME3A LINE L1 -377 5793 5509 311 331 11 67 chr17 4816137 4816213 -84688340 - L2 LINE L2 -613 2701 2622 2281 108 3 0 chr17 4816213 4816518 -84688035 + AluSg SINE Alu 1 306 -4 311 331 11 67 chr17 4816518 4816619 -84687934 - L2 LINE L2 -692 2622 2534 1731 171 3 45 chr17 4816752 4816898 -84687655 + AluJo SINE Alu 1 129 -183 2335 95 3 0 chr17 4816898 4817193 -84687360 + AluSp SINE Alu 1 296 -17 1731 171 3 45 chr17 4817193 4817356 -84687197 + AluJo SINE Alu 129 297 -15 1794 169 28 0 chr17 4817628 4817912 -84686641 + AluJb SINE Alu 1 292 -20 2484 80 0 3 chr17 4818071 4818370 -84686183 + AluSc SINE Alu 1 298 -11 1729 182 30 0 chr17 4818451 4818748 -84685805 + AluJo SINE Alu 1 306 -6 2364 103 3 0 chr17 4819349 4819650 -84684903 - AluSp SINE Alu -11 302 1 249 300 56 0 chr17 4819685 4819775 -84684778 - MIR SINE MIR -70 192 98 824 164 7 26 chr17 4820193 4820328 -84684225 + AluJo SINE Alu 1 134 -178 1437 150 49 95 chr17 4820328 4820654 -84683899 + AluSq SINE Alu 1 311 -2 824 164 7 26 chr17 4820654 4820670 -84683883 + AluJo SINE Alu 134 149 -163 2489 65 0 3 chr17 4820821 4821113 -84683440 - AluSc SINE Alu -18 291 1 438 293 5 34 chr17 4821115 4821323 -84683230 - L1MC5 LINE L1 -429 7532 7331 246 316 187 50 chr17 4821337 4821456 -84683097 + L2 LINE L2 2809 2910 -362 2393 105 0 0 chr17 4821456 4821761 -84682792 - AluSq SINE Alu -8 305 1 246 316 187 50 chr17 4821761 4822043 -84682510 + L2 LINE L2 2910 3265 -7 277 330 80 18 chr17 4822372 4822484 -84682069 - L2 LINE L2 -4 3309 3191 734 252 89 43 chr17 4822486 4822596 -84681957 + MER58B DNA MER1_type 1 104 -2316 2396 55 0 21 chr17 4822596 4822885 -84681668 + AluY SINE Alu 17 299 -12 734 252 89 43 chr17 4822885 4823099 -84681454 + MER58B DNA MER1_type 104 340 -1 560 222 73 43 chr17 4823113 4823347 -84681206 - MER112 DNA MER1_type -12 248 8 678 139 47 47 chr17 4823347 4823476 -84681077 + FLAM_C SINE Alu 1 129 -4 348 259 9 19 chr17 4823590 4823698 -84680855 - L2 LINE L2 -196 3076 2970 2437 100 0 0 chr17 4823701 4824002 -84680551 + AluSg1 SINE Alu 2 302 -7 1400 102 5 0 chr17 4824303 4824490 -84680063 - AluSp SINE Alu -5 308 121 350 54 0 54 chr17 4824498 4824572 -84679981 + (TTTTG)n Simple_repeat Simple_repeat 1 70 0 1310 70 0 41 chr17 4824573 4824744 -84679809 - AluY SINE Alu -147 164 1 706 159 0 23 chr17 4824747 4824879 -84679674 - AluJo/FLAM SINE Alu -173 129 1 722 246 28 9 chr17 4824879 4825094 -84679459 - L1M4 LINE L1 -3371 2775 2557 711 259 118 4 chr17 4825242 4825470 -84679083 - MIR SINE MIR -3 259 6 2281 125 0 0 chr17 4825566 4825878 -84678675 - AluSx SINE Alu 0 312 1 1844 165 3 3 chr17 4825890 4826175 -84678378 - AluJb SINE Alu -27 285 1 2412 92 0 10 chr17 4826365 4826668 -84677885 + AluSx SINE Alu 2 301 -11 347 285 57 83 chr17 4826685 4826913 -84677640 + MIR SINE MIR 39 260 -2 1383 292 58 64 chr17 4827043 4827462 -84677091 + L2 LINE L2 107 527 -2787 2387 69 41 72 chr17 4827462 4827881 -84676672 - L1MA2 LINE L1 0 6304 5899 2183 117 3 13 chr17 4827881 4828190 -84676363 - AluSx SINE Alu -1 311 6 1383 292 58 64 chr17 4828190 4828690 -84675863 + L2 LINE L2 525 1021 -2293 1363 114 0 0 chr17 4828721 4828897 -84675656 - AluSx SINE Alu -136 176 1 194 363 22 22 chr17 4828911 4829002 -84675551 + L2 LINE L2 3222 3312 -1 1376 113 11 0 chr17 4829075 4829260 -84675293 + AluSp SINE Alu 1 187 -126 1937 137 7 7 chr17 4829362 4829654 -84674899 - AluSx SINE Alu -20 292 1 2167 91 63 0 chr17 4829931 4830217 -84674336 - AluSx SINE Alu -7 305 2 384 288 109 42 chr17 4831177 4831304 -84673249 - L2 LINE L2 -58 3255 3138 1835 139 49 7 chr17 4831304 4831591 -84672962 - AluJb SINE Alu -13 299 1 384 288 109 42 chr17 4831591 4831776 -84672777 - L2 LINE L2 -175 3138 2922 2085 136 7 3 chr17 4831893 4832195 -84672358 - AluJb SINE Alu -9 303 1 2034 143 17 0 chr17 4832312 4832605 -84671948 + AluSx SINE Alu 7 304 -8 2307 45 7 41 chr17 4832783 4833110 -84671443 + AluY SINE Alu 1 317 0 180 77 0 0 chr17 4834144 4834170 -84670383 + (CAG)n Simple_repeat Simple_repeat 3 28 0 563 267 53 16 chr17 4834388 4834575 -84669978 - MIR SINE MIR -3 259 66 2269 78 0 19 chr17 4834875 4835182 -84669371 - AluSc SINE Alu -8 301 1 2115 86 52 0 chr17 4835362 4835663 -84668890 - AluSx SINE Alu 0 315 1 245 347 116 0 chr17 4835730 4835851 -84668702 - L2 LINE L2 -1 3271 3137 224 247 340 0 chr17 4835859 4835956 -84668597 + L2 LINE L2 3141 3270 -2 1140 93 0 0 chr17 4836107 4836246 -84668307 + AluSg SINE Alu 1 139 -171 365 75 0 0 chr17 4836251 4836304 -84668249 + Alu SINE Alu 249 301 0 370 243 103 26 chr17 4836382 4836555 -84667998 - MIR SINE MIR -10 252 63 865 254 79 63 chr17 4838614 4838896 -84665657 + L2 LINE L2 2211 2504 -810 2477 93 0 0 chr17 4838896 4839208 -84665345 - AluSp SINE Alu -1 312 1 865 254 79 63 chr17 4839208 4839382 -84665171 + L2 LINE L2 2504 2674 -640 2344 107 0 13 chr17 4839423 4839740 -84664813 - AluSq SINE Alu 0 313 1 334 219 109 0 chr17 4839749 4839877 -84664676 - L1M4 LINE L1 -2191 3955 3814 1428 97 11 0 chr17 4839877 4840063 -84664490 - AluSg/x SINE Alu -13 297 110 651 269 46 102 chr17 4840215 4840625 -84663928 - MLT1K LTR MaLR -26 562 176 1319 48 6 0 chr17 4840625 4840791 -84663762 - THE1C LTR MaLR 0 375 209 1178 67 0 0 chr17 4841091 4841226 -84663327 + AluSq/x SINE Alu 1 135 -178 2226 107 7 13 chr17 4841226 4841534 -84663019 + AluSx SINE Alu 1 306 -6 2015 127 8 33 chr17 4841754 4841879 -84662674 - L1PA16 LINE L1 -9 6157 6030 2474 95 0 0 chr17 4841879 4842184 -84662369 - AluSx SINE Alu -7 305 1 2015 127 8 33 chr17 4842184 4842419 -84662134 - L1PA16 LINE L1 -136 6030 5806 421 270 75 70 chr17 4842456 4842622 -84661931 + MLT1J LTR MaLR 234 398 -113 189 0 0 0 chr17 4842622 4842643 -84661910 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2231 92 0 7 chr17 4842645 4842929 -84661624 - AluSx SINE Alu -29 283 2 421 270 75 70 chr17 4842929 4843000 -84661553 + MLT1J LTR MaLR 398 475 -36 2284 105 23 3 chr17 4843173 4843479 -84661074 - AluSx SINE Alu 0 312 1 723 237 121 22 chr17 4843497 4843508 -84661045 + HsTC2 DNA Tc2 2 11 -1887 1671 117 121 23 chr17 4843508 4843772 -84660781 - AluSg SINE Alu -20 290 1 723 237 121 22 chr17 4843772 4843984 -84660569 + HsTC2 DNA Tc2 11 247 -1651 1492 214 21 8 chr17 4843990 4844369 -84660184 + L1M4 LINE L1 4375 4758 -1388 962 168 114 111 chr17 4844370 4844689 -84659864 + AluJo SINE Alu 1 320 0 2275 97 13 13 chr17 4844698 4845007 -84659546 + AluSp SINE Alu 2 310 -3 1939 138 22 28 chr17 4845012 4845374 -84659179 + L1MC1 LINE L1 5918 6277 -56 1029 113 0 0 chr17 4845374 4845507 -84659046 + AluSq/x SINE Alu 1 133 -179 222 118 0 0 chr17 4845507 4845541 -84659012 + (A)n Simple_repeat Simple_repeat 1 34 0 452 73 0 15 chr17 4845541 4845609 -84658944 + L1MC1 LINE L1 6261 6327 -6 2100 118 0 10 chr17 4845610 4845938 -84658615 + AluSx SINE Alu 1 312 0 571 209 201 14 chr17 4846067 4846352 -84658201 + HsTC2 DNA Tc2 1296 1811 -87 2113 131 0 0 chr17 4846352 4846662 -84657891 + AluSx SINE Alu 1 310 0 230 306 113 48 chr17 4846709 4846938 -84657615 - L2 LINE L2 -23 3290 3047 493 100 0 0 chr17 4847059 4847129 -84657424 + AluS SINE Alu 2 71 -242 273 57 0 0 chr17 4847623 4847658 -84656895 + (A)n Simple_repeat Simple_repeat 1 35 0 313 250 31 102 chr17 4847811 4847939 -84656614 - L2 LINE L2 -6 3307 3189 2031 102 11 0 chr17 4848076 4848341 -84656212 + AluSq SINE Alu 1 268 -45 351 281 10 97 chr17 4848530 4848726 -84655827 - MIR SINE MIR -59 203 25 1715 148 129 44 chr17 4848840 4849106 -84655447 + MER39 LTR ERV1 1 243 -464 2338 88 14 0 chr17 4849106 4849400 -84655153 - AluSp SINE Alu -15 298 1 1715 148 129 44 chr17 4849400 4849620 -84654933 + MER39 LTR ERV1 243 707 0 236 200 0 0 chr17 4850390 4850435 -84654118 - L2 LINE L2 -2 3311 3267 637 188 39 0 chr17 4850694 4850822 -84653731 - FLAM_C SINE Alu 0 133 1 2181 90 11 4 chr17 4850957 4851264 -84653289 - AluSg SINE Alu 0 309 1 186 191 0 0 chr17 4851587 4851629 -84652924 + (TTA)n Simple_repeat Simple_repeat 1 42 0 347 273 167 0 chr17 4852221 4852353 -84652200 + MIR SINE MIR 47 200 -62 1600 120 4 21 chr17 4852579 4852758 -84651795 - AluSq SINE Alu -1 312 137 2378 79 10 0 chr17 4852758 4853050 -84651503 - AluSx SINE Alu -17 295 1 1600 120 4 21 chr17 4853050 4853112 -84651441 - AluSq SINE Alu -176 137 75 2015 101 18 0 chr17 4854005 4854281 -84650272 - AluSx SINE Alu -17 295 15 266 319 121 28 chr17 4854334 4854582 -84649971 - L2 LINE L2 -354 2960 2690 1252 171 20 33 chr17 4854703 4854948 -84649605 - AluJo SINE Alu -70 242 1 798 328 85 32 chr17 4854970 4855467 -84649086 - L2 LINE L2 -1081 2233 1689 2185 108 0 20 chr17 4855467 4855772 -84648781 + AluSg SINE Alu 11 309 -1 798 328 85 32 chr17 4855772 4855954 -84648599 - L2 LINE L2 -1625 1689 1518 241 130 0 0 chr17 4856018 4856064 -84648489 + MADE1 DNA Mariner 1 46 -34 197 291 182 7 chr17 4856073 4856221 -84648332 - L2 LINE L2 -1897 1417 1244 330 146 0 0 chr17 4856534 4856582 -84647971 + AluSg/x SINE Alu 218 265 -37 548 212 78 60 chr17 4856682 4856899 -84647654 + L1MC4 LINE L1 5639 5859 -1949 979 248 125 21 chr17 4856899 4857400 -84647153 + L2 LINE L2 2509 3072 -241 288 0 0 0 chr17 4857400 4857432 -84647121 + (CA)n Simple_repeat Simple_repeat 1 32 0 1984 112 36 7 chr17 4857523 4857800 -84646753 + AluSg SINE Alu 1 285 -25 379 260 77 65 chr17 4857863 4858032 -84646521 + L2 LINE L2 3103 3273 -40 273 267 61 53 chr17 4858037 4858168 -84646385 + L1MD2 LINE L1 6198 6329 -30 366 333 0 0 chr17 4858176 4858266 -84646287 + L1MC4 LINE L1 6614 6703 -1339 339 298 48 0 chr17 4858224 4858308 -84646245 - L1MC4 LINE L1 -1339 6703 6616 * 1117 215 5 10 chr17 4858411 4858616 -84645937 - AluJo SINE Alu -108 204 1 1360 263 198 35 chr17 4858643 4858985 -84645568 + HAL1 LINE L1 126 411 -2096 1959 71 108 8 chr17 4858985 4859253 -84645300 + AluSx SINE Alu 1 295 -17 1360 263 198 35 chr17 4859253 4859275 -84645278 + HAL1 LINE L1 411 428 -2079 1554 170 99 7 chr17 4859275 4859558 -84644995 + AluJb SINE Alu 1 309 -3 1360 263 198 35 chr17 4859558 4859792 -84644761 + HAL1 LINE L1 428 823 -1684 1138 168 0 0 chr17 4859792 4859965 -84644588 - FRAM SINE Alu -6 170 1 287 247 35 0 chr17 4859968 4860053 -84644500 + HAL1 LINE L1 817 904 -1603 572 138 0 0 chr17 4860131 4860218 -84644335 + AluS SINE Alu 2 88 -225 2355 116 0 0 chr17 4860533 4860844 -84643709 + AluSx SINE Alu 1 311 -1 308 192 39 0 chr17 4860844 4860922 -84643631 + HAL1 LINE L1 2304 2384 -123 1035 150 63 77 chr17 4860931 4860980 -84643573 + AluJb SINE Alu 87 135 -177 2335 109 0 6 chr17 4860980 4861293 -84643260 + AluSx SINE Alu 1 311 -1 1035 150 63 77 chr17 4861293 4861450 -84643103 + AluJb SINE Alu 135 290 -22 396 203 144 25 chr17 4861455 4861573 -84642980 + HAL1 LINE L1 2376 2507 0 2240 119 7 0 chr17 4861601 4861927 -84642626 + AluSq SINE Alu 1 313 0 2429 99 0 0 chr17 4862321 4862623 -84641930 + AluSq SINE Alu 1 302 -11 2194 102 0 7 chr17 4862790 4863084 -84641469 + AluSx SINE Alu 1 292 -20 309 141 0 0 chr17 4863260 4863282 -84641271 + (A)n Simple_repeat Simple_repeat 1 22 -42 2412 72 10 0 chr17 4863282 4863574 -84640979 - AluSp SINE Alu -20 293 1 309 141 0 0 chr17 4863574 4863586 -84640967 + (A)n Simple_repeat Simple_repeat 22 33 -31 217 0 0 0 chr17 4863592 4863616 -84640937 + (TTG)n Simple_repeat Simple_repeat 1 180 0 2121 98 40 0 chr17 4863616 4863887 -84640666 - AluSq SINE Alu -9 304 1 309 141 0 0 chr17 4863887 4863902 -84640651 + (A)n Simple_repeat Simple_repeat 33 47 -17 2412 49 7 3 chr17 4863902 4864206 -84640347 - AluY SINE Alu -6 305 1 309 141 0 0 chr17 4864206 4864218 -84640335 + (A)n Simple_repeat Simple_repeat 46 64 0 2425 62 7 0 chr17 4864226 4864532 -84640021 - AluY SINE Alu -3 308 1 29 0 0 0 chr17 4864602 4864631 -84639922 + AT_rich Low_complexity Low_complexity 1 29 0 1399 160 4 4 chr17 4864713 4864951 -84639602 - AluJb SINE Alu 0 312 75 22 0 0 0 chr17 4865115 4865137 -84639416 + AT_rich Low_complexity Low_complexity 1 22 0 267 295 67 9 chr17 4865308 4865413 -84639140 - L3 LINE CR1 -1310 267 157 283 316 62 37 chr17 4865510 4865754 -84638799 + L1MC4 LINE L1 7689 7938 -104 188 206 0 0 chr17 4865939 4865973 -84638580 + L2 LINE L2 3016 3049 -264 2067 120 10 0 chr17 4866192 4866492 -84638061 + AluSg SINE Alu 1 303 -7 593 154 0 77 chr17 4867872 4868067 -84636486 + CT-rich Low_complexity Low_complexity 1 180 0 278 254 213 25 chr17 4869510 4869632 -84634921 + MIR SINE MIR 62 206 -56 22 0 0 0 chr17 4869632 4869654 -84634899 + AT_rich Low_complexity Low_complexity 1 22 0 1149 209 60 38 chr17 4873080 4873396 -84631157 + Charlie4a DNA MER1_type 1 323 -185 1659 139 63 21 chr17 4873396 4873683 -84630870 + AluJb SINE Alu 1 299 -13 2251 95 0 3 chr17 4873683 4873979 -84630574 + AluSg SINE Alu 1 295 -15 838 171 29 0 chr17 4874223 4874363 -84630190 + FRAM SINE Alu 9 152 -24 1390 156 5 9 chr17 4874919 4875143 -84629410 - AluSg/x SINE Alu -18 292 70 279 324 54 0 chr17 4875808 4875919 -84628634 - MER117 DNA MER1_type -55 142 26 356 346 64 16 chr17 4875920 4876108 -84628445 + MIR SINE MIR 60 256 -6 2038 127 3 3 chr17 4876165 4876464 -84628089 - AluSx SINE Alu -13 299 1 1719 107 19 91 chr17 4877086 4877405 -84627148 + AluSx SINE Alu 1 296 -16 2205 110 0 0 chr17 4877406 4877707 -84626846 + AluSc SINE Alu 1 301 -8 21 0 0 0 chr17 4877729 4877750 -84626803 + AT_rich Low_complexity Low_complexity 1 21 0 1854 151 14 0 chr17 4877768 4878059 -84626494 + AluJb SINE Alu 1 295 -17 2514 50 3 0 chr17 4879103 4879405 -84625148 - AluY SINE Alu -8 303 1 1959 153 3 0 chr17 4879408 4879716 -84624837 - AluSx SINE Alu -3 309 1 445 101 0 2 chr17 4879911 4880169 -84624384 + AluY SINE Alu 2 304 -7 366 181 64 0 chr17 4880185 4880278 -84624275 + MER58 DNA MER1_type 1 109 -232 386 292 106 0 chr17 4880356 4880469 -84624084 + L2 LINE L2 3148 3272 0 5920 201 21 15 chr17 4880495 4880700 -84623853 + L1MB8 LINE L1 3974 4176 -1970 2008 143 0 3 chr17 4880700 4881014 -84623539 + AluSq SINE Alu 1 313 0 5920 201 21 15 chr17 4881014 4882214 -84622339 + L1MB8 LINE L1 4176 5388 -758 2977 145 12 79 chr17 4882219 4882393 -84622160 + L1PB3 LINE L1 5611 5795 -359 2045 97 4 4 chr17 4882393 4882671 -84621882 + AluSg SINE Alu 1 278 -32 2977 145 12 79 chr17 4882671 4883077 -84621476 + L1PB3 LINE L1 5795 6152 -2 2058 127 0 0 chr17 4883087 4883378 -84621175 + AluSx SINE Alu 1 291 -21 2519 50 0 0 chr17 4884833 4885132 -84619421 + AluY SINE Alu 1 299 -12 392 247 17 98 chr17 4885178 4885375 -84619178 - L2 LINE L2 -107 3206 3029 2286 88 0 0 chr17 4885375 4885671 -84618882 + AluSq SINE Alu 1 296 -17 392 247 17 98 chr17 4885671 4885708 -84618845 - L2 LINE L2 -284 3029 2991 1310 170 87 7 chr17 4885712 4885971 -84618582 + L1MB8 LINE L1 5518 5804 -380 3050 163 20 38 chr17 4885971 4886531 -84618022 - MER44D DNA MER2_type 0 605 1 1310 170 87 7 chr17 4886531 4886559 -84617994 + L1MB8 LINE L1 5804 5828 -356 553 206 76 30 chr17 4886563 4886694 -84617859 + FLAM_A SINE Alu 1 137 -5 1243 182 16 55 chr17 4886710 4887017 -84617536 + L1MB8 LINE L1 5845 6139 -39 1908 117 0 28 chr17 4887017 4887337 -84617216 + AluSx SINE Alu 1 312 0 1778 86 0 163 chr17 4887338 4887688 -84616865 + AluSg SINE Alu 1 293 -17 2174 96 0 3 chr17 4887688 4887989 -84616564 + AluSg SINE Alu 1 300 -10 405 125 0 0 chr17 4888095 4888151 -84616402 - AluS SINE Alu -246 63 8 2531 292 65 43 chr17 4888205 4888240 -84616313 - L2 LINE L2 -342 2972 2939 1503 181 10 16 chr17 4888240 4888544 -84616009 + AluJo SINE Alu 1 302 -10 2531 292 65 43 chr17 4888544 4889423 -84615130 - L2 LINE L2 -375 2939 2029 1652 186 6 6 chr17 4889423 4889734 -84614819 + AluJo SINE Alu 1 311 -1 2531 292 65 43 chr17 4889734 4889886 -84614667 - L2 LINE L2 -1285 2029 1882 1598 196 113 100 chr17 4889961 4890204 -84614349 + L1MC4 LINE L1 7177 7415 -627 765 124 7 103 chr17 4890204 4890349 -84614204 - FLAM_C SINE Alu 0 133 3 1598 196 113 100 chr17 4890349 4890551 -84614002 + L1MC4 LINE L1 7415 7613 -429 1790 126 35 29 chr17 4890551 4890861 -84613692 + AluSx SINE Alu 1 312 0 1598 196 113 100 chr17 4890861 4890919 -84613634 + L1MC4 LINE L1 7613 7669 -373 198 0 0 0 chr17 4890919 4890941 -84613612 + (TTG)n Simple_repeat Simple_repeat 2 23 0 1598 196 113 100 chr17 4890941 4891063 -84613490 + L1MC4 LINE L1 7669 7812 -230 695 81 11 0 chr17 4891163 4891250 -84613303 + AluSq SINE Alu 101 188 -125 1663 149 25 38 chr17 4891343 4891658 -84612895 + AluJb SINE Alu 1 311 -1 207 0 0 0 chr17 4891693 4891716 -84612837 + (A)n Simple_repeat Simple_repeat 1 23 0 466 299 13 32 chr17 4892105 4892259 -84612294 - L2 LINE L2 -567 2747 2597 326 278 87 24 chr17 4892389 4892515 -84612038 + L2 LINE L2 3175 3308 -5 1835 169 0 0 chr17 4892837 4893133 -84611420 + AluJb SINE Alu 1 296 -16 293 330 60 32 chr17 4893603 4893788 -84610765 - L2 LINE L2 -713 2601 2412 * 322 310 87 45 chr17 4893768 4894092 -84610461 + L2 LINE L2 2746 3077 -195 305 221 13 39 chr17 4894137 4894214 -84610339 + L2 LINE L2 3195 3269 -3 2279 61 3 10 chr17 4895169 4895465 -84609088 - AluSx SINE Alu -18 294 1 2140 93 17 0 chr17 4896458 4896748 -84607805 - AluSx SINE Alu -17 295 1 834 370 58 40 chr17 4896751 4897563 -84606990 + L2 LINE L2 2474 3298 -15 793 196 14 0 chr17 4897564 4897707 -84606846 - AluJb SINE Alu -52 260 116 2246 86 3 3 chr17 4897708 4898011 -84606542 - AluY SINE Alu -8 303 1 1456 129 177 12 chr17 4898013 4898261 -84606292 - AluSg SINE Alu -11 289 1 355 190 76 0 chr17 4898539 4898618 -84605935 + AluSg/x SINE Alu 170 254 -48 6381 136 238 19 chr17 4898629 4899969 -84604584 - pTR5 LTR ERV1 -21 2417 785 530 124 19 38 chr17 4899969 4900074 -84604479 + FRAM SINE Alu 74 176 0 200 296 163 10 chr17 4900224 4900322 -84604231 + L2 LINE L2 3173 3285 -28 241 247 34 22 chr17 4900322 4900411 -84604142 + (TGGA)n Simple_repeat Simple_repeat 2 91 0 583 238 73 6 chr17 4903209 4903373 -84601180 + MIR SINE MIR 1 175 -87 542 101 0 0 chr17 4903373 4903479 -84601074 - AluSg/x SINE Alu 0 319 214 2204 85 0 24 chr17 4903481 4903619 -84600934 + AluSx SINE Alu 1 141 -161 1939 141 0 19 chr17 4903619 4903757 -84600796 + AluSx SINE Alu 1 140 -172 2298 69 3 0 chr17 4903757 4904047 -84600506 + AluY SINE Alu 1 291 -20 1939 141 0 19 chr17 4904047 4904220 -84600333 + AluSx SINE Alu 140 306 -6 2204 85 0 24 chr17 4904220 4904376 -84600177 + AluSx SINE Alu 141 288 -14 252 293 13 0 chr17 4904378 4904453 -84600100 + MIR SINE MIR 179 254 -8 357 62 0 0 chr17 4905877 4905925 -84598628 + (CA)n Simple_repeat Simple_repeat 2 49 0 309 100 0 0 chr17 4905961 4906011 -84598542 + (CA)n Simple_repeat Simple_repeat 2 51 0 186 191 0 0 chr17 4906041 4906083 -84598470 + (CA)n Simple_repeat Simple_repeat 2 43 0 363 23 0 0 chr17 4906101 4906145 -84598408 + (CA)n Simple_repeat Simple_repeat 2 45 0 208 150 25 0 chr17 4907045 4907085 -84597468 + (CTGGGG)n Simple_repeat Simple_repeat 6 46 0 2104 121 3 0 chr17 4907242 4907539 -84597014 - AluSx SINE Alu -13 299 2 1985 113 28 3 chr17 4909189 4909480 -84595073 - AluSq SINE Alu -15 298 1 262 302 239 16 chr17 4909884 4910202 -84594351 - L2 LINE L2 -46 3267 2879 200 261 134 0 chr17 4910346 4910465 -84594088 - L2 LINE L2 -457 2857 2723 181 195 73 0 chr17 4912086 4912127 -84592426 + L2 LINE L2 3226 3269 -3 210 37 0 0 chr17 4912755 4912782 -84591771 + (CAA)n Simple_repeat Simple_repeat 3 29 0 2261 90 0 0 chr17 4912797 4913098 -84591455 - AluSx SINE Alu -11 301 1 316 346 108 0 chr17 4913163 4913377 -84591176 - L2 LINE L2 -230 3083 2847 21 0 0 0 chr17 4913651 4913672 -84590881 + AT_rich Low_complexity Low_complexity 1 21 0 359 270 36 0 chr17 5114749 5114860 -84389693 + L1MC/D LINE L1 5486 5600 -744 2312 109 3 0 chr17 5115023 5115334 -84389219 + AluSq SINE Alu 1 312 -1 378 0 0 0 chr17 5115834 5115876 -84388677 + (CA)n Simple_repeat Simple_repeat 2 43 0 1822 129 29 0 chr17 5115902 5116180 -84388373 + AluJo SINE Alu 1 286 -26 246 192 27 41 chr17 5116358 5116431 -84388122 + C-rich Low_complexity Low_complexity 1 72 0 28 0 0 0 chr17 5116525 5116553 -84388000 + GC_rich Low_complexity Low_complexity 1 28 0 5683 52 8 0 chr17 5117125 5117783 -84386770 + LTR5 LTR ERVK 1 663 -306 2250 98 7 13 chr17 5117921 5118227 -84386326 - AluSx SINE Alu -8 304 1 501 278 124 0 chr17 5118301 5118470 -84386083 + MIR SINE MIR 71 260 -2 2155 110 0 0 chr17 5118501 5118782 -84385771 + AluSg SINE Alu 11 291 -19 2254 71 0 17 chr17 5118986 5119283 -84385270 + AluY SINE Alu 1 292 -19 184 343 27 0 chr17 5119747 5119820 -84384733 + L2 LINE L2 2884 2958 -356 2408 81 3 3 chr17 5119838 5120146 -84384407 - AluSp SINE Alu -5 308 1 2225 82 13 16 chr17 5120152 5120455 -84384098 - AluSq SINE Alu -11 302 1 1000 181 12 0 chr17 5121069 5121235 -84383318 + AluSg/x SINE Alu 138 305 -7 2038 121 3 36 chr17 5121388 5121721 -84382832 - AluSq SINE Alu 0 313 1 23 0 0 0 chr17 5121767 5121790 -84382763 + AT_rich Low_complexity Low_complexity 1 23 0 577 196 38 23 chr17 5121790 5121923 -84382630 - AluJb SINE Alu -176 136 2 300 47 23 0 chr17 5122394 5122437 -84382116 + L1P2 LINE L1 5758 5801 -354 339 171 11 34 chr17 5122535 5122623 -84381930 + L1MA9 LINE L1 6222 6307 -5 1119 290 96 47 chr17 5122943 5123028 -84381525 + L2 LINE L2 316 395 -2919 2058 158 0 3 chr17 5123028 5123332 -84381221 - AluJb SINE Alu -5 307 5 1119 290 96 47 chr17 5123332 5123904 -84380649 + L2 LINE L2 395 1005 -2309 911 126 0 0 chr17 5124008 5124127 -84380426 + AluSg/x SINE Alu 169 287 -23 2453 101 0 0 chr17 5124127 5124435 -84380118 + AluSx SINE Alu 1 308 -4 1904 116 0 56 chr17 5124624 5124908 -84379645 - AluSq SINE Alu -16 297 30 2087 127 20 0 chr17 5125044 5125336 -84379217 + AluSx SINE Alu 1 298 -14 216 209 0 0 chr17 5125658 5125701 -84378852 + A-rich Low_complexity Low_complexity 1 43 0 2160 90 45 3 chr17 5126413 5126701 -84377852 + AluSp SINE Alu 2 301 -12 229 357 66 50 chr17 5126983 5127302 -84377251 + L2 LINE L2 2864 3187 -85 2275 62 4 7 chr17 5127444 5127718 -84376835 + AluSp SINE Alu 32 304 -9 207 204 0 0 chr17 5128057 5128106 -84376447 + T-rich Low_complexity Low_complexity 3 51 0 4493 36 0 12 chr17 5128106 5128608 -84375945 - SVA Other Other 0 1386 891 2145 107 24 0 chr17 5128908 5129198 -84375355 - AluSx SINE Alu -15 297 1 250 208 56 14 chr17 5130072 5130144 -84374409 - MIR SINE MIR -75 187 113 293 51 0 0 chr17 5130624 5130663 -84373890 - Alu SINE Alu -245 58 20 1511 99 33 9 chr17 5130701 5130913 -84373640 + AluSg/x SINE Alu 89 305 -5 419 310 71 25 chr17 5131182 5131379 -84373174 - MIR SINE MIR 0 262 57 1995 125 13 3 chr17 5132477 5132781 -84371772 + AluSq SINE Alu 1 307 -6 291 204 146 39 chr17 5132781 5132884 -84371669 + MLT1A2 LTR MaLR 161 274 -100 2345 79 0 0 chr17 5134109 5134389 -84370164 - AluSq SINE Alu -16 297 18 2409 83 0 13 chr17 5134560 5134874 -84369679 - AluSg SINE Alu 0 310 1 2652 67 0 0 chr17 5134879 5135191 -84369362 - AluSx SINE Alu 0 312 1 213 204 23 11 chr17 5135741 5135829 -84368724 + CT-rich Low_complexity Low_complexity 1 89 0 1093 153 37 104 chr17 5136124 5136712 -84367841 - MER4C LTR ERV1 -15 450 1 1037 74 7 14 chr17 5137809 5137957 -84366596 - AluY SINE Alu -1 310 164 2195 114 7 13 chr17 5138256 5138562 -84365991 - AluSx SINE Alu -8 304 1 231 314 49 10 chr17 5138791 5138893 -84365660 - MIR3 SINE MIR -100 108 3 207 185 158 87 chr17 5139012 5139115 -84365438 + MIR SINE MIR 27 138 -70 1758 166 10 30 chr17 5139361 5139663 -84364890 + AluJo SINE Alu 1 296 -16 2347 76 3 7 chr17 5139666 5139957 -84364596 + AluSp SINE Alu 1 290 -23 210 175 0 25 chr17 5139982 5140022 -84364531 + GA-rich Low_complexity Low_complexity 3 41 0 230 83 83 21 chr17 5140450 5140498 -84364055 + LTR41 LTR ERVL 711 761 -12 2229 115 0 7 chr17 5141266 5141562 -84362991 - AluSx SINE Alu -18 294 1 3465 209 42 68 chr17 5141997 5142442 -84362111 - MLT-int LTR MaLR -753 982 570 2223 107 3 0 chr17 5142442 5142733 -84361820 + AluSq SINE Alu 1 292 -21 3465 209 42 68 chr17 5142733 5143175 -84361378 - MLT-int LTR MaLR -1165 570 118 2086 126 7 3 chr17 5143175 5143469 -84361084 - AluSx SINE Alu -17 295 1 2170 105 18 0 chr17 5143759 5144045 -84360508 + AluSc SINE Alu 2 292 -17 1380 105 0 0 chr17 5144415 5144587 -84359966 - AluSq SINE Alu -141 172 1 180 0 0 0 chr17 5145175 5145195 -84359358 + (G)n Simple_repeat Simple_repeat 1 20 0 1650 110 68 48 chr17 5145505 5145797 -84358756 + AluSp SINE Alu 2 299 -14 1525 164 42 18 chr17 5146302 5146426 -84358127 + AluJo SINE Alu 1 120 -182 2071 130 3 29 chr17 5146426 5146563 -84357990 + AluSx SINE Alu 1 140 -172 2307 92 0 4 chr17 5146563 5146888 -84357665 + AluSq SINE Alu 5 328 0 2071 130 3 29 chr17 5146888 5147080 -84357473 + AluSx SINE Alu 140 312 0 1525 164 42 18 chr17 5147080 5147241 -84357312 + AluJo SINE Alu 120 293 -9 2516 58 10 0 chr17 5147243 5147535 -84357018 + AluY SINE Alu 1 295 -16 1605 172 8 0 chr17 5147871 5148127 -84356426 + AluJo SINE Alu 10 267 -45 318 307 66 49 chr17 5152050 5152294 -84352259 + L1M2 LINE L1 1665 1912 -4937 545 272 78 56 chr17 5152394 5152606 -84351947 + L2 LINE L2 2913 3138 -175 1954 138 51 0 chr17 5152606 5152902 -84351651 - AluSx SINE Alu -1 311 1 545 272 78 56 chr17 5152902 5153046 -84351507 + L2 LINE L2 3138 3277 -36 2134 113 19 13 chr17 5153208 5153517 -84351036 + AluSx SINE Alu 1 311 -1 2374 70 3 3 chr17 5153790 5154098 -84350455 + AluSp SINE Alu 2 309 0 305 295 11 0 chr17 5154381 5154476 -84350077 - MIR3 SINE MIR -2 206 111 1679 167 7 7 chr17 5154524 5154627 -84349926 + AluJb SINE Alu 31 133 -179 2359 105 0 0 chr17 5154627 5154921 -84349632 + AluSq SINE Alu 1 294 -19 1679 167 7 7 chr17 5154921 5155099 -84349454 + AluJb SINE Alu 132 312 0 2275 96 7 0 chr17 5155644 5155935 -84348618 + AluSc SINE Alu 5 297 -12 556 98 0 12 chr17 5156072 5156154 -84348399 - AluJb SINE Alu -148 164 84 1774 132 38 0 chr17 5156201 5156466 -84348087 + AluSx SINE Alu 18 292 -20 26 50 0 0 chr17 5156467 5156507 -84348046 + AT_rich Low_complexity Low_complexity 1 40 0 2259 96 20 0 chr17 5156560 5156852 -84347701 + AluSp SINE Alu 1 298 -15 2288 96 3 7 chr17 5156854 5157156 -84347397 + AluY SINE Alu 1 301 -10 2312 94 10 3 chr17 5157717 5158026 -84346527 - AluY SINE Alu 0 311 1 2046 143 10 0 chr17 5158076 5158377 -84346176 - AluJo SINE Alu -8 304 1 740 251 157 61 chr17 5158510 5158969 -84345584 - LTR33 LTR ERVL -9 512 10 585 331 74 46 chr17 5159020 5159455 -84345098 + L2 LINE L2 2196 2642 -672 282 80 20 0 chr17 5159480 5159530 -84345023 - AluY SINE Alu -169 132 82 1526 109 14 0 chr17 5159530 5159741 -84344812 - AluY SINE Alu -94 217 4 997 272 71 57 chr17 5160112 5160608 -84343945 - MLT1J LTR MaLR -8 503 1 1702 182 0 14 chr17 5160667 5160953 -84343600 - AluJo SINE Alu -30 282 1 258 315 87 8 chr17 5161190 5161444 -84343109 + L1M4 LINE L1 4672 4945 -1201 2026 144 7 0 chr17 5161668 5161959 -84342594 - AluSx SINE Alu -14 298 6 811 117 23 8 chr17 5162240 5162368 -84342185 - AluJb SINE Alu -7 305 176 910 157 7 20 chr17 5164171 5164318 -84340235 - FRAM SINE Alu -14 162 18 742 205 0 0 chr17 5165226 5165343 -84339210 - FLAM_C SINE Alu -25 118 2 493 260 113 23 chr17 5165448 5165625 -84338928 + MIR3 SINE MIR 9 201 -7 536 218 171 64 chr17 5165686 5165781 -84338772 - MIR SINE MIR -2 260 177 479 167 49 0 chr17 5165781 5165883 -84338670 - L1MB8 LINE L1 0 6178 6072 536 218 171 64 chr17 5165883 5166021 -84338532 - MIR SINE MIR -85 177 2 987 218 119 48 chr17 5169251 5169628 -84334925 - MLT1C LTR MaLR -58 409 6 1618 218 139 37 chr17 5169674 5169887 -84334666 + L1ME3A LINE L1 4399 4589 -1557 347 0 23 0 chr17 5169887 5169930 -84334623 + (TG)n Simple_repeat Simple_repeat 1 44 0 1618 218 139 37 chr17 5169930 5170412 -84334141 + L1ME3A LINE L1 4589 5165 -981 2080 110 10 20 chr17 5170412 5170711 -84333842 + AluSg SINE Alu 1 296 -14 885 260 89 41 chr17 5170727 5171173 -84333380 + L1ME3A LINE L1 5407 5902 -268 1888 157 7 0 chr17 5171173 5171467 -84333086 + AluJb SINE Alu 6 301 -11 885 260 89 41 chr17 5171467 5171533 -84333020 + L1ME3A LINE L1 5902 5963 -207 2341 98 3 0 chr17 5171742 5172038 -84332515 - AluSp SINE Alu -16 297 1 2236 116 0 3 chr17 5172105 5172406 -84332147 - AluSg SINE Alu -10 300 1 1624 185 13 10 chr17 5173192 5173490 -84331063 - AluJo SINE Alu -13 299 1 33 43 0 0 chr17 5174183 5174230 -84330323 + AT_rich Low_complexity Low_complexity 1 47 0 2299 106 6 3 chr17 5174748 5175060 -84329493 - AluSp SINE Alu 0 313 1 2015 143 10 0 chr17 5175191 5175484 -84329069 - AluSx SINE Alu -16 296 1 35 74 0 11 chr17 5175486 5175530 -84329023 + AT_rich Low_complexity Low_complexity 1 44 -50 2344 107 0 0 chr17 5175530 5175840 -84328713 - AluSx SINE Alu -2 310 1 35 74 0 11 chr17 5175840 5175890 -84328663 + AT_rich Low_complexity Low_complexity 44 94 0 683 234 116 111 chr17 5176024 5176105 -84328448 - L2 LINE L2 -799 2515 2436 2145 98 14 0 chr17 5176105 5176380 -84328173 - AluSc SINE Alu -30 279 1 683 234 116 111 chr17 5176380 5176739 -84327814 - L2 LINE L2 -878 2436 2073 1905 127 7 14 chr17 5176739 5177031 -84327522 + AluSx SINE Alu 1 290 -22 2715 13 10 7 chr17 5177506 5177810 -84326743 + AluYa5 SINE Alu 1 305 -6 2209 103 4 0 chr17 5177912 5178236 -84326317 + AluSx SINE Alu 1 325 0 582 259 24 24 chr17 5178346 5178512 -84326041 + MER5A DNA MER1_type 24 189 0 2042 112 46 0 chr17 5178522 5178807 -84325746 - AluSp SINE Alu -15 298 1 281 254 111 40 chr17 5179136 5179262 -84325291 - Charlie2 DNA MER1_type -797 2065 1931 1365 191 8 12 chr17 5179270 5179527 -84325026 + AluJb SINE Alu 18 273 -39 593 61 91 0 chr17 5179686 5179785 -84324768 - AluSq/x SINE Alu -205 108 1 1440 146 11 52 chr17 5179945 5180072 -84324481 + AluJb SINE Alu 3 115 -197 2226 103 3 0 chr17 5180072 5180363 -84324190 + AluSc SINE Alu 2 293 -16 1440 146 11 52 chr17 5180363 5180503 -84324050 + AluJb SINE Alu 115 259 -53 486 143 112 0 chr17 5180503 5180601 -84323952 + FRAM SINE Alu 67 175 -1 2161 101 50 0 chr17 5181149 5181446 -84323107 + AluSq SINE Alu 1 312 -1 330 186 0 0 chr17 5181747 5181806 -84322747 + L1MB5 LINE L1 5902 5960 -214 2184 120 7 3 chr17 5181886 5182194 -84322359 + AluSp SINE Alu 3 311 -2 366 229 8 29 chr17 5182248 5182391 -84322162 + L1ME LINE L1 5314 5455 -701 1821 171 7 0 chr17 5182413 5182705 -84321848 + AluJb SINE Alu 1 294 -18 265 283 33 0 chr17 5182883 5182975 -84321578 - L1ME LINE L1 -459 5662 5568 2328 90 3 6 chr17 5183066 5183378 -84321175 + AluSq SINE Alu 3 313 0 1288 86 0 131 chr17 5183510 5183594 -84320959 - AluSx SINE Alu -119 193 100 2156 78 50 0 chr17 5183594 5183877 -84320676 - AluY SINE Alu -14 297 1 1288 86 0 131 chr17 5183877 5184014 -84320539 - AluSx SINE Alu -212 100 1 1993 145 0 0 chr17 5184183 5184472 -84320081 + AluJb SINE Alu 1 289 -23 2202 116 3 0 chr17 5184566 5184858 -84319695 + AluSg SINE Alu 2 294 -16 334 203 125 55 chr17 5184924 5185052 -84319501 + MLT1B LTR MaLR 2 138 -252 1451 181 4 0 chr17 5185052 5185290 -84319263 + AluJo SINE Alu 1 239 -73 549 189 0 27 chr17 5185292 5185403 -84319150 + AluJb SINE Alu 202 309 -3 427 215 16 0 chr17 5185403 5185524 -84319029 + GA-rich Low_complexity Low_complexity 1 123 0 218 171 0 0 chr17 5185539 5185574 -84318979 + CT-rich Low_complexity Low_complexity 1 35 0 804 192 13 0 chr17 5185625 5185781 -84318772 + MLT1B LTR MaLR 192 349 -41 247 162 0 0 chr17 5185824 5185861 -84318692 + MLT1B LTR MaLR 354 390 0 2079 93 6 42 chr17 5185920 5186231 -84318322 - AluSg SINE Alu -9 301 2 649 280 63 19 chr17 5186240 5186552 -84318001 + L1ME LINE L1 5479 5806 -360 1978 133 0 17 chr17 5186552 5186845 -84317708 + AluJb SINE Alu 11 298 -14 2356 72 10 3 chr17 5186845 5187138 -84317415 + AluSc SINE Alu 1 295 -14 386 171 0 14 chr17 5187139 5187209 -84317344 + MLT1C LTR MaLR 399 467 0 330 45 0 0 chr17 5187298 5187342 -84317211 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 2131 115 7 0 chr17 5187342 5187621 -84316932 - AluSq SINE Alu -32 281 1 315 310 147 16 chr17 5187624 5187753 -84316800 - MIR3 SINE MIR -61 147 2 553 189 8 45 chr17 5188045 5188177 -84316376 - FAM SINE Alu -5 44 1 2307 117 3 0 chr17 5188206 5188514 -84316039 - AluSx SINE Alu -3 309 1 26 50 0 0 chr17 5188715 5188755 -84315798 + AT_rich Low_complexity Low_complexity 1 40 0 629 185 174 34 chr17 5189405 5189458 -84315095 - MER3 DNA MER1_type -3 206 162 1657 191 10 16 chr17 5189458 5189772 -84314781 + AluJb SINE Alu 1 312 0 629 185 174 34 chr17 5189772 5189896 -84314657 - MER3 DNA MER1_type -47 162 4 229 203 90 8 chr17 5193286 5193419 -84311134 + (TA)n Simple_repeat Simple_repeat 1 144 0 * 239 222 30 30 chr17 5193329 5193428 -84311125 + (TATAA)n Simple_repeat Simple_repeat 5 103 0 1682 135 16 64 chr17 5193701 5193874 -84310679 - AluSx SINE Alu -15 297 144 6371 36 0 14 chr17 5193874 5194604 -84309949 - SVA Other Other -2 1384 665 1682 135 16 64 chr17 5194604 5194742 -84309811 - AluSx SINE Alu -168 144 1 1723 124 86 4 chr17 5196363 5196630 -84307923 - MER7A DNA MER2_type -4 342 56 444 153 0 28 chr17 5196630 5196702 -84307851 + AluJ/FRAM SINE Alu 220 289 -23 2650 58 0 0 chr17 5197486 5197796 -84306757 - AluY SINE Alu 0 311 2 2042 127 3 3 chr17 5199362 5199661 -84304892 - AluSc SINE Alu -10 299 1 2395 61 14 3 chr17 5199673 5199969 -84304584 - AluY SINE Alu -12 299 1 820 163 0 15 chr17 5200071 5200206 -84304347 - FLAM_C SINE Alu 0 133 1 625 178 29 106 chr17 5200267 5200392 -84304161 - LTR41 LTR ERVL -2 771 638 2066 116 0 33 chr17 5200392 5200693 -84303860 + AluSx SINE Alu 1 291 -21 1899 166 0 7 chr17 5200703 5200993 -84303560 + AluJb SINE Alu 1 288 -24 625 178 29 106 chr17 5200993 5201064 -84303489 - LTR41 LTR ERVL -144 629 580 623 237 124 27 chr17 5201129 5201315 -84303238 - MER63A DNA MER1_type 0 210 7 339 173 298 19 chr17 5201316 5201420 -84303133 + FLAM_A SINE Alu 1 133 0 213 264 138 50 chr17 5201470 5201629 -84302924 - L2 LINE L2 -471 2843 2671 399 310 44 0 chr17 5202166 5202279 -84302274 - MIR SINE MIR -121 141 24 27 0 0 0 chr17 5202452 5202479 -84302074 + AT_rich Low_complexity Low_complexity 1 27 0 2418 78 0 3 chr17 5202489 5202783 -84301770 + AluSq SINE Alu 5 297 -16 1866 164 13 0 chr17 5202953 5203252 -84301301 + AluJb SINE Alu 1 303 -9 1085 215 113 58 chr17 5203260 5203434 -84301119 + L1MEc LINE L1 39 202 -6194 1527 123 192 0 chr17 5203434 5203695 -84300858 - AluJb SINE Alu -1 311 1 1085 215 113 58 chr17 5203695 5203902 -84300651 + L1MEc LINE L1 202 441 -5955 498 165 52 0 chr17 5204594 5204691 -84299862 - Charlie1 DNA MER1_type -30 2731 2630 549 205 74 95 chr17 5204701 5204839 -84299714 - Charlie1 DNA MER1_type -2544 217 83 2081 130 0 22 chr17 5204839 5205155 -84299398 + AluJb SINE Alu 1 309 -3 549 205 74 95 chr17 5205155 5205206 -84299347 - Charlie1 DNA MER1_type -2678 83 32 345 271 146 35 chr17 5205247 5205391 -84299162 - MIR SINE MIR -24 238 79 1681 153 44 24 chr17 5206781 5207076 -84297477 + AluJb SINE Alu 1 301 -11 1367 152 0 0 chr17 5208975 5209213 -84295340 - AluJb SINE Alu 0 322 85 704 281 92 41 chr17 5209293 5209781 -84294772 - L1ME4a LINE L1 -1 6120 5608 2069 156 99 21 chr17 5210974 5211398 -84293155 + MSTB2 LTR MaLR 1 457 0 1054 146 0 0 chr17 5212283 5212454 -84292099 + AluSg/x SINE Alu 131 301 0 2097 119 14 0 chr17 5212585 5212871 -84291682 - AluSq SINE Alu -23 290 1 779 61 0 0 chr17 5213572 5213671 -84290882 - L1PA4 LINE L1 -2 6153 6055 2786 34 3 0 chr17 5213671 5213996 -84290557 + L1P2 LINE L1 5449 5774 -381 1565 170 48 15 chr17 5214848 5215118 -84289435 + AluJo SINE Alu 6 319 0 208 114 0 0 chr17 5215118 5215153 -84289400 + (TAA)n Simple_repeat Simple_repeat 2 180 0 2331 94 0 29 chr17 5215660 5215968 -84288585 + AluSx SINE Alu 1 299 -13 2314 110 0 3 chr17 5216026 5216335 -84288218 + AluSc SINE Alu 1 308 -1 2020 116 14 83 chr17 5218920 5219282 -84285271 + MER1B DNA MER1_type 1 337 0 2476 97 3 0 chr17 5219890 5220201 -84284352 + AluSp SINE Alu 1 312 -1 438 260 97 41 chr17 5220467 5220690 -84283863 + L1M4 LINE L1 2963 3211 -2935 2331 80 0 7 chr17 5220690 5220991 -84283562 + AluY SINE Alu 1 299 -12 438 260 97 41 chr17 5220991 5221086 -84283467 + L1M4 LINE L1 3211 3299 -2847 1003 88 0 0 chr17 5221205 5221330 -84283223 + AluSq/x SINE Alu 1 125 -187 2268 109 3 0 chr17 5221334 5221637 -84282916 + AluSg SINE Alu 1 304 -6 709 281 55 46 chr17 5221639 5222205 -84282348 + L1M4 LINE L1 3422 3992 -2154 242 247 21 10 chr17 5222511 5222608 -84281945 + L1M4 LINE L1 4272 4369 -1777 1751 133 10 45 chr17 5223652 5223960 -84280593 - AluSq SINE Alu -16 297 1 720 140 0 18 chr17 5224146 5224260 -84280293 + FLAM_C SINE Alu 6 117 -26 26 0 0 0 chr17 5224267 5224293 -84280260 + AT_rich Low_complexity Low_complexity 1 26 0 29 0 0 0 chr17 5228306 5228335 -84276218 + AT_rich Low_complexity Low_complexity 1 29 0 635 251 15 41 chr17 5228336 5228531 -84276022 - LTR41 LTR ERVL -583 190 1 2272 127 17 17 chr17 5228775 5229130 -84275423 - THE1A LTR MaLR 0 355 1 11729 91 10 8 chr17 5229130 5230707 -84273846 - THE1A-int LTR MaLR 0 1580 1 2485 112 6 8 chr17 5230707 5231063 -84273490 - THE1A LTR MaLR 0 355 1 1157 242 11 23 chr17 5231166 5231430 -84273123 + MIR SINE MIR 2 262 0 845 138 23 0 chr17 5231506 5231636 -84272917 - FLAM_C SINE Alu 0 133 1 2426 78 0 0 chr17 5232372 5232668 -84271885 - AluY SINE Alu -15 296 1 24 0 0 0 chr17 5232679 5232703 -84271850 + AT_rich Low_complexity Low_complexity 1 24 0 757 161 0 0 chr17 5232754 5232866 -84271687 - FLAM_C SINE Alu -30 113 2 1759 164 44 0 chr17 5232868 5233161 -84271392 - AluJb SINE Alu -6 306 1 1554 163 67 14 chr17 5233161 5233442 -84271111 - AluJo SINE Alu -15 297 1 2186 112 3 7 chr17 5233711 5234005 -84270548 + AluSx SINE Alu 1 293 -19 2030 195 101 43 chr17 5234324 5234857 -84269696 + LTR6A LTR ERV1 1 564 0 1790 88 0 0 chr17 5235850 5236077 -84268476 - AluSg/x SINE Alu -14 298 72 572 291 0 55 chr17 5236195 5236394 -84268159 + MIR SINE MIR 3 190 -72 2131 109 3 10 chr17 5236827 5237130 -84267423 + AluSx SINE Alu 1 301 -11 1825 73 0 0 chr17 5237249 5237483 -84267070 + L1PA6 LINE L1 5919 6152 -2 1932 129 3 45 chr17 5237519 5237829 -84266724 + AluSx SINE Alu 1 297 -15 1193 148 6 0 chr17 5237829 5238005 -84266548 + AluSg/x SINE Alu 132 308 -2 300 246 158 35 chr17 5238094 5238208 -84266345 + L2 LINE L2 3186 3313 0 27 49 0 0 chr17 5238416 5238457 -84266096 + AT_rich Low_complexity Low_complexity 1 41 0 1304 161 81 22 chr17 5238528 5238801 -84265752 - AluJo SINE Alu -11 301 13 252 0 0 0 chr17 5238830 5238858 -84265695 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 1492 193 4 22 chr17 5238877 5239152 -84265401 - AluJo SINE Alu -42 270 1 2320 86 0 0 chr17 5239159 5239469 -84265084 - AluSc SINE Alu 0 310 1 2960 176 98 41 chr17 5239490 5240176 -84264377 - MER21B LTR ERV1 -45 818 94 2167 125 3 6 chr17 5240182 5240493 -84264060 - AluSp SINE Alu -3 310 1 1964 148 0 0 chr17 5240494 5240792 -84263761 - AluSx SINE Alu -12 300 3 2378 99 0 13 chr17 5240869 5241183 -84263370 - AluSp SINE Alu -3 310 1 327 232 32 74 chr17 5241407 5241502 -84263051 - L2 LINE L2 -9 3263 3173 269 288 12 0 chr17 5241512 5241592 -84262961 - L1ME LINE L1 -357 5764 5684 1248 141 20 43 chr17 5241635 5241890 -84262663 + Charlie1b DNA MER1_type 59 307 -216 1119 203 11 23 chr17 5241890 5242156 -84262397 - AluJo SINE Alu -11 301 39 2308 107 3 3 chr17 5242336 5242645 -84261908 + AluSx SINE Alu 1 309 -3 426 282 141 33 chr17 5242674 5242887 -84261666 + MIR SINE MIR 21 256 -6 2139 105 3 3 chr17 5243053 5243348 -84261205 + AluSx SINE Alu 1 295 -17 2204 117 0 7 chr17 5243348 5243648 -84260905 + AluSg SINE Alu 1 298 -12 1406 150 0 0 chr17 5244421 5244628 -84259925 - AluSq SINE Alu -7 306 100 2247 81 0 7 chr17 5244630 5244915 -84259638 - AluY SINE Alu -28 283 1 2070 111 3 20 chr17 5245121 5245419 -84259134 - AluSx SINE Alu -19 293 1 253 314 49 10 chr17 5245650 5245752 -84258801 - MIR3 SINE MIR -100 108 3 231 182 158 87 chr17 5245871 5245974 -84258579 + MIR SINE MIR 27 138 -70 230 329 0 0 chr17 5246366 5246442 -84258111 - L1ME LINE L1 -331 5839 5764 1412 183 20 53 chr17 5246446 5246746 -84257807 - AluJo SINE Alu -22 290 1 248 208 0 0 chr17 5246750 5246798 -84257755 - L1ME LINE L1 -387 5783 5736 522 260 27 0 chr17 5246852 5246998 -84257555 - L1ME LINE L1 -428 5742 5593 2356 112 0 3 chr17 5247012 5247325 -84257228 - AluSx SINE Alu 0 312 1 2214 89 3 7 chr17 5247795 5248087 -84256466 - AluY SINE Alu -6 305 15 2377 95 0 0 chr17 5248091 5248387 -84256166 - AluY SINE Alu -15 296 1 938 204 71 82 chr17 5248397 5248775 -84255778 - MLT1A2 LTR MaLR 0 374 1 1974 143 0 17 chr17 5248802 5249102 -84255451 - AluSx SINE Alu -17 295 1 1607 161 75 7 chr17 5249131 5249411 -84255142 + AluJb SINE Alu 1 299 -13 484 278 73 122 chr17 5249570 5249955 -84254598 + L2 LINE L2 2948 3313 0 751 260 25 54 chr17 5249955 5250062 -84254491 - MIR SINE MIR 0 262 153 2437 72 0 10 chr17 5250062 5250368 -84254185 - AluY SINE Alu -8 303 1 751 260 25 54 chr17 5250368 5250502 -84254051 - MIR SINE MIR -109 153 28 2218 111 34 0 chr17 5250643 5250941 -84253612 - AluSx SINE Alu 0 312 5 1876 153 0 10 chr17 5251188 5251476 -84253077 - AluJb SINE Alu -13 299 15 205 229 183 46 chr17 5251540 5251671 -84252882 + MIR3 SINE MIR 11 159 -49 2037 74 4 0 chr17 5253340 5253612 -84250941 + AluSp SINE Alu 39 311 0 622 300 155 51 chr17 5253822 5254017 -84250536 + L2 LINE L2 2006 2179 -1093 2084 118 0 30 chr17 5254017 5254322 -84250231 - AluSx SINE Alu -16 296 1 622 300 155 51 chr17 5254322 5254930 -84249623 + L2 LINE L2 2179 2722 -550 2385 107 0 0 chr17 5254930 5255239 -84249314 + AluSg SINE Alu 1 309 -1 622 300 155 51 chr17 5255239 5255552 -84249001 + L2 LINE L2 2722 3266 -6 332 293 136 21 chr17 5255651 5255791 -84248762 + L2 LINE L2 3151 3306 -7 2251 102 13 3 chr17 5256047 5256350 -84248203 + AluSq SINE Alu 1 306 -7 2154 132 7 0 chr17 5256486 5256782 -84247771 + AluSx SINE Alu 1 298 -14 483 239 90 0 chr17 5256921 5257055 -84247498 - MLT1L LTR MaLR 0 615 470 402 209 181 60 chr17 5257082 5257186 -84247367 - MLT1L LTR MaLR -211 404 314 2237 92 46 0 chr17 5257186 5257470 -84247083 - AluSc SINE Alu -12 297 1 402 209 181 60 chr17 5257470 5257547 -84247006 - MLT1L LTR MaLR -301 314 201 1954 167 39 28 chr17 5257549 5257756 -84246797 - MLT1A1 LTR MaLR -1 364 150 1914 156 0 56 chr17 5257756 5257925 -84246628 - AluJo SINE Alu -9 303 159 2397 92 0 10 chr17 5257925 5258229 -84246324 - AluY SINE Alu -10 301 1 1914 156 0 56 chr17 5258229 5258380 -84246173 - AluJo SINE Alu -153 159 1 1954 167 39 28 chr17 5258380 5258532 -84246021 - MLT1A1 LTR MaLR -215 150 1 6242 198 66 46 chr17 5258532 5259697 -84244856 - MLT1A1-int LTR MaLR 0 1735 534 2172 126 3 3 chr17 5259697 5260007 -84244546 + AluSq SINE Alu 1 310 -3 6242 198 66 46 chr17 5260007 5260309 -84244244 - MLT1A1-int LTR MaLR -1201 534 239 1294 296 40 30 chr17 5265148 5265820 -84238733 - L1MC3 LINE L1 -1621 6164 5486 257 178 10 139 chr17 5271114 5271215 -84233338 + SN5 Other centromeric 300 387 -68 2003 161 24 3 chr17 5272215 5272551 -84232002 - MER2 DNA MER2_type 0 344 2 183 80 0 0 chr17 5272631 5272656 -84231897 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 216 182 23 0 chr17 5273140 5273184 -84231369 + C-rich Low_complexity Low_complexity 4 48 0 213 204 23 11 chr17 5273495 5273583 -84230970 + GA-rich Low_complexity Low_complexity 1 89 0 2265 92 3 3 chr17 5274136 5274442 -84230111 + AluSp SINE Alu 1 306 -7 585 64 0 0 chr17 5274488 5274566 -84229987 + (TG)n Simple_repeat Simple_repeat 2 79 0 3105 136 4 10 chr17 5274765 5275251 -84229302 - MER1A DNA MER1_type 0 529 47 766 161 14 156 chr17 5275446 5275657 -84228896 - MLT1C LTR MaLR 0 467 210 238 108 37 0 chr17 5275657 5275708 -84228845 + MLT-int LTR MaLR 142 216 -1155 270 160 0 0 chr17 5276281 5276331 -84228222 + (CGTG)n Simple_repeat Simple_repeat 3 52 0 201 121 0 0 chr17 5276380 5276413 -84228140 + (TG)n Simple_repeat Simple_repeat 2 34 0 192 346 38 53 chr17 5278009 5278405 -84226148 + L2 LINE L2 2498 2887 -427 319 259 126 21 chr17 5279229 5279372 -84225181 + MIR3 SINE MIR 44 201 -7 216 0 0 0 chr17 5279705 5279729 -84224824 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 311 319 104 7 chr17 5280346 5280481 -84224072 + MIR SINE MIR 81 228 -34 24 0 0 0 chr17 5280508 5280532 -84224021 + AT_rich Low_complexity Low_complexity 1 24 0 349 263 256 7 chr17 5281156 5281293 -84223260 + LTR28 LTR ERV1 8 178 -842 339 163 23 47 chr17 5281304 5281390 -84223163 + LTR1 LTR ERV1 107 190 -595 * 2377 223 65 39 chr17 5281359 5282054 -84222499 + LTR28 LTR ERV1 308 1020 0 1533 118 126 37 chr17 5282161 5282431 -84222122 - AluSg SINE Alu -14 296 3 501 265 107 20 chr17 5282467 5282663 -84221890 + L2 LINE L2 2587 2799 -515 241 261 76 89 chr17 5282684 5282715 -84221838 - L2 LINE L2 0 3313 3283 2280 81 0 0 chr17 5282715 5283012 -84221541 - AluSg SINE Alu -13 297 1 241 261 76 89 chr17 5283012 5283137 -84221416 - L2 LINE L2 -30 3283 3159 212 271 127 34 chr17 5283251 5283369 -84221184 + L2 LINE L2 2884 3012 -301 * 435 312 102 10 chr17 5283355 5283560 -84220993 - MIR SINE MIR -8 254 31 1952 118 3 0 chr17 5284698 5284986 -84219567 - AluSx SINE Alu -23 289 1 735 176 142 0 chr17 5285211 5285387 -84219166 - MLT1A2 LTR MaLR 0 374 174 2019 117 3 7 chr17 5285404 5285713 -84218840 - AluSx SINE Alu -4 308 1 277 248 19 43 chr17 5286137 5286298 -84218255 + A-rich Low_complexity Low_complexity 6 162 0 390 318 60 35 chr17 5286825 5287026 -84217527 + MIR SINE MIR 57 262 0 1006 177 28 19 chr17 5287295 5287510 -84217043 - AluSg/x SINE Alu -5 307 91 2490 0 0 17 chr17 5287546 5287839 -84216714 + AluYa5 SINE Alu 18 305 -6 2112 100 4 0 chr17 5287941 5288260 -84216293 + AluSx SINE Alu 1 320 0 601 271 18 18 chr17 5288371 5288537 -84216016 + MER5A DNA MER1_type 24 189 0 1938 115 45 0 chr17 5288545 5288832 -84215721 - AluSp SINE Alu -13 300 1 260 252 110 47 chr17 5289162 5289289 -84215264 - Charlie2 DNA MER1_type -797 2065 1931 1475 190 3 27 chr17 5289297 5289568 -84214985 + AluJb SINE Alu 18 283 -29 264 30 0 0 chr17 5289568 5289601 -84214952 + (TATAA)n Simple_repeat Simple_repeat 4 36 0 1475 190 3 27 chr17 5289601 5289629 -84214924 + AluJb SINE Alu 283 310 -2 406 320 28 39 chr17 5289630 5289811 -84214742 - Charlie2 DNA MER1_type -2683 179 1 1436 87 36 14 chr17 5289885 5290104 -84214449 + AluY SINE Alu 84 307 -4 596 199 12 53 chr17 5290585 5290756 -84213797 + Charlie2 DNA MER1_type 2692 2855 -7 2112 114 3 0 chr17 5291141 5291440 -84213113 - AluSx SINE Alu -12 300 1 1537 127 91 36 chr17 5291683 5291958 -84212595 - AluJb SINE Alu -22 290 1 289 286 13 0 chr17 5291986 5292063 -84212490 + L2 LINE L2 3186 3263 -9 193 327 35 44 chr17 5293260 5293373 -84211180 - L2 LINE L2 -219 3053 2942 199 319 42 0 chr17 5293380 5293452 -84211101 + L2 LINE L2 2884 2958 -356 2067 103 3 10 chr17 5293470 5293780 -84210773 - AluSp SINE Alu -5 308 1 2184 78 3 19 chr17 5293786 5294093 -84210460 - AluSq SINE Alu -11 302 1 228 224 0 0 chr17 5294201 5294250 -84210303 - MLT1K LTR MaLR -339 249 201 303 353 101 29 chr17 5294452 5294575 -84209978 + L2 LINE L2 1019 1132 -2182 2066 107 3 17 chr17 5294575 5294709 -84209844 + AluSg SINE Alu 1 135 -175 2277 98 3 0 chr17 5294709 5295016 -84209537 + AluSg SINE Alu 1 308 -2 2066 107 3 17 chr17 5295016 5295179 -84209374 + AluSg SINE Alu 135 294 -16 303 353 101 29 chr17 5295179 5295361 -84209192 + L2 LINE L2 1132 1346 -1968 589 180 73 101 chr17 5295549 5295567 -84208986 - MER5B DNA MER1_type -2 176 159 7798 64 2 3 chr17 5295567 5296537 -84208016 + LTR5 LTR ERVK 1 969 0 589 180 73 101 chr17 5296537 5296696 -84207857 - MER5B DNA MER1_type -19 159 4 970 136 14 127 chr17 5296707 5296856 -84207697 + MER5A DNA MER1_type 1 121 -68 2048 120 3 19 chr17 5296856 5297173 -84207380 - AluSx SINE Alu 0 312 1 970 136 14 127 chr17 5297173 5297236 -84207317 + MER5A DNA MER1_type 121 189 0 2260 99 0 3 chr17 5297339 5297653 -84206900 - AluSp SINE Alu 0 313 1 2001 123 0 3 chr17 5298056 5298378 -84206175 - AluSx SINE Alu 0 321 1 420 226 0 12 chr17 5298788 5298872 -84205681 + Tigger5 DNA MER2_type 1 83 -2240 1221 111 12 0 chr17 5298878 5299049 -84205504 - AluSg/x SINE Alu -2 310 138 846 87 17 0 chr17 5299080 5299195 -84205358 + AluSq/x SINE Alu 1 117 -195 2049 115 26 0 chr17 5299195 5299499 -84205054 - AluSx SINE Alu 0 312 1 477 181 0 0 chr17 5299499 5299582 -84204971 + Tigger5 DNA MER2_type 2241 2323 0 372 236 28 69 chr17 5300052 5300196 -84204357 - MER117 DNA MER1_type -57 140 3 976 113 0 0 chr17 5300358 5300500 -84204053 - AluSp/q SINE Alu -4 309 168 1004 149 24 100 chr17 5300500 5300749 -84203804 - L1 LINE L1 -1114 5032 4803 2130 113 3 3 chr17 5300799 5301100 -84203453 + AluSx SINE Alu 10 310 -2 2091 75 6 53 chr17 5301419 5301738 -84202815 + AluSg SINE Alu 2 305 -5 743 189 13 19 chr17 5301877 5302036 -84202517 - MLT1B LTR MaLR -41 349 192 218 171 0 0 chr17 5302087 5302122 -84202431 + GA-rich Low_complexity Low_complexity 1 35 0 427 215 16 0 chr17 5302137 5302258 -84202295 + CT-rich Low_complexity Low_complexity 1 123 0 595 180 0 27 chr17 5302258 5302369 -84202184 - AluJb SINE Alu -3 309 202 1359 177 0 4 chr17 5302371 5302603 -84201950 - AluJo SINE Alu -73 239 9 327 207 129 43 chr17 5302626 5302742 -84201811 - MLT1B LTR MaLR -263 127 2 1849 117 3 23 chr17 5302809 5303109 -84201444 - AluSg SINE Alu -15 295 2 936 117 0 0 chr17 5303200 5303328 -84201225 - AluJb SINE Alu -23 289 162 244 208 56 14 chr17 5303457 5303529 -84201024 - MIR SINE MIR -75 187 113 229 83 83 21 chr17 5303831 5303879 -84200674 + LTR41 LTR ERVL 711 761 -12 1031 243 10 17 chr17 5304643 5304935 -84199618 - AluSq SINE Alu -12 301 12 1185 137 55 136 chr17 5305483 5305852 -84198701 - MER4C LTR ERV1 0 473 149 5043 78 39 58 chr17 5305971 5306827 -84197726 - SVA Other Other -519 867 29 1531 123 0 25 chr17 5306831 5307066 -84197487 - AluSq SINE Alu 0 313 85 2231 115 0 3 chr17 5307120 5307433 -84197120 - AluSq SINE Alu -1 312 1 2296 66 3 10 chr17 5307442 5307745 -84196808 - AluSp SINE Alu -12 301 1 1288 206 0 23 chr17 5307828 5308129 -84196424 - AluSg SINE Alu -16 294 1 822 169 5 77 chr17 5308154 5308349 -84196204 - LTR62 LTR ERVK -538 181 1 826 269 90 35 chr17 5308792 5309160 -84195393 - MLT1H1 LTR MaLR 0 555 168 1460 88 5 5 chr17 5309163 5309367 -84195186 - AluSx SINE Alu -16 294 91 748 209 32 41 chr17 5309367 5309587 -84194966 - LTR7 LTR ERV1 0 450 233 756 161 0 0 chr17 5311732 5311850 -84192703 + AluSg/x SINE Alu 177 294 -16 823 214 28 6 chr17 5311850 5311969 -84192584 + AluJo SINE Alu 1 127 -185 509 0 16 0 chr17 5311969 5312030 -84192523 + (CA)n Simple_repeat Simple_repeat 2 63 0 823 214 28 6 chr17 5312030 5312092 -84192461 + AluJo SINE Alu 127 186 -126 729 123 9 0 chr17 5312111 5312217 -84192336 - AluSx SINE Alu -202 111 5 2184 86 3 16 chr17 5312602 5312906 -84191647 + AluSg SINE Alu 5 304 -6 968 177 0 0 chr17 5312909 5313067 -84191486 + AluJb SINE Alu 140 297 -15 1719 175 0 7 chr17 5313073 5313370 -84191183 + AluJo SINE Alu 5 299 -13 396 295 18 9 chr17 5313439 5313551 -84191002 + L2 LINE L2 3159 3271 -42 2188 113 0 6 chr17 5314100 5314411 -84190142 - AluSx SINE Alu -2 310 2 674 173 17 12 chr17 5314533 5314706 -84189847 + CT-rich Low_complexity Low_complexity 5 178 0 627 163 10 0 chr17 5314745 5314843 -84189710 - AluJ/FLAM SINE Alu -212 100 2 1967 202 24 71 chr17 5315312 5315363 -84189190 + LTR31 LTR ERV1 1 53 -566 1607 164 38 11 chr17 5315363 5315488 -84189065 + AluJo SINE Alu 3 123 -189 270 0 0 0 chr17 5315488 5315518 -84189035 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1607 164 38 11 chr17 5315518 5315679 -84188874 + AluJo SINE Alu 123 297 -15 1967 202 24 71 chr17 5315679 5315803 -84188750 + LTR31 LTR ERV1 53 181 -438 2327 104 10 10 chr17 5315803 5316112 -84188441 + AluSq SINE Alu 1 309 -4 1967 202 24 71 chr17 5316112 5316503 -84188050 + LTR31 LTR ERV1 181 553 -66 2303 55 0 35 chr17 5316503 5316814 -84187739 + AluY SINE Alu 1 300 -11 1967 202 24 71 chr17 5316814 5316862 -84187691 + LTR31 LTR ERV1 553 602 -17 303 250 70 0 chr17 5317098 5317198 -84187355 + (CAGTG)n Simple_repeat Simple_repeat 4 110 0 2081 126 3 10 chr17 5317469 5317770 -84186783 - AluSx SINE Alu -8 304 6 2205 99 0 7 chr17 5318138 5318441 -84186112 - AluSc SINE Alu 0 301 1 2397 57 0 3 chr17 5318786 5319069 -84185484 + AluSq SINE Alu 25 306 -7 362 236 63 0 chr17 5319210 5319349 -84185204 - MIR SINE MIR -70 138 45 2275 98 0 10 chr17 5320454 5320759 -84183794 + AluSx SINE Alu 1 302 -10 302 280 131 0 chr17 5320977 5321084 -84183469 + MIR3 SINE MIR 36 156 -52 208 338 26 13 chr17 5321377 5321454 -84183099 - L2 LINE L2 -241 3031 2954 2094 121 3 19 chr17 5322161 5322475 -84182078 - AluSp SINE Alu -3 310 2 1110 219 93 7 chr17 5322803 5323082 -84181471 + MLT1D LTR MaLR 41 343 -162 1712 71 9 0 chr17 5323259 5323494 -84181059 - AluSg/x SINE Alu 0 306 70 2279 106 0 0 chr17 5323613 5323906 -84180647 + AluSg SINE Alu 17 309 -1 691 291 57 0 chr17 5323911 5324121 -84180432 + L1ME3A LINE L1 5944 6165 -5 228 35 0 0 chr17 5324595 5324624 -84179929 + (TG)n Simple_repeat Simple_repeat 2 30 0 5765 30 0 3 chr17 5324624 5325333 -84179220 - L1PA4 LINE L1 -4 6151 5445 736 71 0 0 chr17 5325333 5325428 -84179125 + L1PA5 LINE L1 6054 6152 -2 437 153 0 0 chr17 5325464 5325536 -84179017 - AluJ/FLAM SINE Alu -239 73 2 2361 105 7 0 chr17 5325545 5325851 -84178702 - AluSx SINE Alu -4 308 1 660 149 61 0 chr17 5326012 5326126 -84178427 - FLAM_C SINE Alu -17 126 6 2131 221 46 63 chr17 5326159 5326250 -84178303 + MER77 LTR ERV1 46 137 -468 2383 87 0 7 chr17 5326250 5326548 -84178005 + AluSg SINE Alu 1 296 -14 2099 140 0 3 chr17 5326558 5326858 -84177695 + AluSx SINE Alu 1 299 -13 2131 221 46 63 chr17 5326858 5327325 -84177228 + MER77 LTR ERV1 146 605 0 699 151 0 125 chr17 5327517 5327669 -84176884 + FLAM_A SINE Alu 1 133 0 2101 102 0 47 chr17 5327677 5327999 -84176554 + AluSg SINE Alu 1 307 -3 2261 95 3 7 chr17 5328007 5328302 -84176251 + AluSx SINE Alu 4 297 -15 298 264 0 0 chr17 5328667 5328739 -84175814 - MIR SINE MIR -176 86 15 227 174 22 0 chr17 5328779 5328825 -84175728 + L2 LINE L2 3224 3270 -2 2081 104 0 28 chr17 5329022 5329311 -84175242 - AluSq SINE Alu -31 282 2 2355 79 0 13 chr17 5329323 5329626 -84174927 - AluY SINE Alu -12 299 1 2330 106 0 3 chr17 5329901 5330204 -84174349 - AluSq SINE Alu -11 302 1 297 272 237 18 chr17 5330330 5330444 -84174109 - MIR3 SINE MIR -21 187 49 2183 106 0 32 chr17 5330782 5331094 -84173459 - AluSx SINE Alu -10 302 1 316 248 106 39 chr17 5331130 5331286 -84173267 + MIR SINE MIR 34 204 -58 2354 80 0 10 chr17 5331385 5331684 -84172869 - AluY SINE Alu -15 296 1 291 28 0 0 chr17 5331685 5331721 -84172832 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2193 101 22 0 chr17 5331721 5331998 -84172555 - AluSg SINE Alu -27 283 1 322 234 120 53 chr17 5382153 5382300 -84122253 + L1M4 LINE L1 4469 4636 -1510 1982 101 8 0 chr17 5382300 5382557 -84121996 - AluSp SINE Alu -18 295 37 322 234 120 53 chr17 5382557 5382618 -84121935 + L1M4 LINE L1 4636 4691 -1455 2441 48 35 7 chr17 5382650 5382939 -84121614 + AluY SINE Alu 1 297 -14 1859 153 0 0 chr17 5382939 5383213 -84121340 - AluSx SINE Alu -37 275 1 285 250 26 13 chr17 5383385 5383461 -84121092 - LTR67 LTR ERVL -380 177 101 1935 108 0 0 chr17 5383535 5383786 -84120767 + AluSg SINE Alu 54 304 -6 663 312 75 20 chr17 5383850 5384142 -84120411 + L2 LINE L2 1121 1428 -1886 271 222 42 0 chr17 5384170 5384242 -84120311 + L2 LINE L2 1541 1615 -1699 1938 133 3 10 chr17 5384242 5384535 -84120018 - AluSg SINE Alu -19 291 1 414 140 0 0 chr17 5384573 5384630 -84119923 - AluS SINE Alu -260 58 2 637 237 59 0 chr17 5384630 5384782 -84119771 + MER20 DNA MER1_type 54 214 -5 501 281 6 18 chr17 5385172 5385336 -84119217 + AluSq SINE Alu 147 308 -5 2424 96 0 0 chr17 5385339 5385642 -84118911 + AluSc SINE Alu 3 305 -4 2289 216 111 27 chr17 5385644 5385806 -84118747 + L1M4 LINE L1 4462 4609 -1537 2045 133 7 0 chr17 5385806 5386099 -84118454 - AluSq SINE Alu -18 295 1 2289 216 111 27 chr17 5386099 5386574 -84117979 + L1M4 LINE L1 4609 5174 -972 2284 116 6 0 chr17 5386574 5386885 -84117668 + AluSp SINE Alu 1 313 0 2289 216 111 27 chr17 5386885 5386997 -84117556 + L1M4 LINE L1 5174 5275 -871 250 217 103 69 chr17 5387099 5387274 -84117279 + Charlie7 DNA MER1_type 508 688 -1924 1356 136 148 38 chr17 5387417 5387653 -84116900 - AluJo SINE Alu -17 295 34 254 234 0 0 chr17 5387669 5387716 -84116837 + L2 LINE L2 3255 3301 -12 2346 99 0 3 chr17 5387718 5388021 -84116532 + AluSq SINE Alu 1 302 -11 2452 154 20 18 chr17 5388021 5388476 -84116077 + LTR62 LTR ERVK 262 717 -2 459 252 25 0 chr17 5388650 5388769 -84115784 - AluSq/x SINE Alu -190 123 2 1523 176 20 36 chr17 5388845 5389146 -84115407 - AluSx SINE Alu -16 296 1 330 257 37 37 chr17 5389267 5389376 -84115177 - MIR SINE MIR 0 262 154 2036 128 44 3 chr17 5389421 5389719 -84114834 - AluSg SINE Alu 0 310 1 2212 119 7 3 chr17 5389729 5390031 -84114522 - AluSx SINE Alu -9 303 1 2397 69 0 3 chr17 5390109 5390400 -84114153 + AluY SINE Alu 4 293 -18 197 302 32 0 chr17 5390757 5390820 -84113733 + L2 LINE L2 2714 2778 -536 2308 89 27 0 chr17 5390826 5391118 -84113435 + AluSx SINE Alu 1 300 -12 2269 106 3 7 chr17 5392525 5392827 -84111726 - AluSx SINE Alu -2 310 10 944 147 4 113 chr17 5392897 5393128 -84111425 + L1 LINE L1 4827 5032 -1114 1004 105 0 7 chr17 5393128 5393271 -84111282 + AluSp/q SINE Alu 168 309 -4 321 254 28 70 chr17 5393435 5393577 -84110976 + MER117 DNA MER1_type 5 140 -57 505 169 0 0 chr17 5394047 5394130 -84110423 - Tigger5 DNA MER2_type 0 2323 2241 2051 117 25 0 chr17 5394130 5394412 -84110141 + AluSx SINE Alu 1 289 -23 86 103 0 0 chr17 5394619 5394891 -84109662 + GC_rich Low_complexity Low_complexity 1 272 0 2067 115 0 16 chr17 5394971 5395307 -84109246 + AluY SINE Alu 3 311 0 407 319 32 13 chr17 5395330 5395487 -84109066 - Charlie2 DNA MER1_type -2622 160 1 1485 99 36 14 chr17 5395561 5395784 -84108769 + AluY SINE Alu 84 311 0 611 199 12 53 chr17 5396260 5396431 -84108122 + Charlie2 DNA MER1_type 2692 2855 -7 2266 107 3 0 chr17 5396813 5397112 -84107441 - AluSx SINE Alu -12 300 1 183 348 162 29 chr17 5397113 5397317 -84107236 + L2 LINE L2 3029 3259 -13 1629 131 91 36 chr17 5397355 5397630 -84106923 - AluJb SINE Alu -22 290 1 314 286 13 0 chr17 5397658 5397735 -84106818 + L2 LINE L2 3186 3263 -9 199 319 35 44 chr17 5398919 5399032 -84105521 - L2 LINE L2 -219 3053 2942 213 319 42 0 chr17 5399039 5399111 -84105442 + L2 LINE L2 2883 2957 -356 2390 81 3 3 chr17 5399129 5399437 -84105116 - AluSp SINE Alu -5 308 1 2368 81 0 16 chr17 5399443 5399750 -84104803 - AluSq SINE Alu -11 302 1 323 341 99 41 chr17 5400109 5400232 -84104321 + L2 LINE L2 1019 1134 -2180 2180 108 3 17 chr17 5400232 5400366 -84104187 + AluSg SINE Alu 1 135 -175 2427 101 0 0 chr17 5400366 5400673 -84103880 + AluSg SINE Alu 1 307 -3 2180 108 3 17 chr17 5400673 5400835 -84103718 + AluSg SINE Alu 135 293 -17 323 341 99 41 chr17 5400835 5401025 -84103528 + L2 LINE L2 1134 1350 -1964 556 185 73 101 chr17 5401205 5401223 -84103330 - MER5B DNA MER1_type -2 176 159 8564 52 2 0 chr17 5401223 5402190 -84102363 + LTR5 LTR ERVK 1 969 0 556 185 73 101 chr17 5402190 5402349 -84102204 - MER5B DNA MER1_type -19 159 4 1041 137 15 93 chr17 5402360 5402501 -84102052 + MER5A DNA MER1_type 1 123 -66 2197 112 3 40 chr17 5402501 5402824 -84101729 - AluSx SINE Alu -1 311 1 1041 137 15 93 chr17 5402824 5402887 -84101666 + MER5A DNA MER1_type 123 189 0 2420 99 0 0 chr17 5402990 5403303 -84101250 - AluSp SINE Alu 0 313 1 2149 124 0 0 chr17 5403704 5404026 -84100527 - AluSp SINE Alu 0 324 3 449 222 0 11 chr17 5404438 5404528 -84100025 + Tigger5 DNA MER2_type 1 89 -2234 1300 111 12 0 chr17 5404528 5404700 -84099853 - AluSg/x SINE Alu -1 311 138 885 73 0 0 chr17 5404731 5404841 -84099712 + AluSq/x SINE Alu 1 110 -203 258 95 0 0 chr17 5404841 5404883 -84099670 + (T)n Simple_repeat Simple_repeat 1 42 0 1051 102 0 0 chr17 5405314 5405442 -84099111 + AluSq/x SINE Alu 6 133 -180 2362 94 0 0 chr17 5405445 5405754 -84098799 + AluY SINE Alu 1 309 -2 244 256 44 22 chr17 5405755 5405845 -84098708 + Charlie2 DNA MER1_type 219 310 -2472 1564 174 4 18 chr17 5405918 5406193 -84098360 - AluJb SINE Alu -24 288 18 275 246 111 40 chr17 5406201 5406327 -84098226 + Charlie2 DNA MER1_type 1931 2065 -797 2075 109 46 0 chr17 5406656 5406941 -84097612 + AluSp SINE Alu 1 298 -15 645 259 24 24 chr17 5406951 5407117 -84097436 - MER5A DNA MER1_type 0 189 24 2234 100 4 0 chr17 5407227 5407546 -84097007 - AluSx SINE Alu 0 320 1 2888 10 0 0 chr17 5407648 5407955 -84096598 - AluYa5 SINE Alu -4 307 1 2105 121 0 23 chr17 5408422 5408727 -84095826 - AluSx SINE Alu -14 298 1 2463 84 0 0 chr17 5408750 5409048 -84095505 - AluY SINE Alu -13 298 1 2522 77 0 3 chr17 5410096 5410408 -84094145 - AluY SINE Alu 0 311 1 2034 143 10 0 chr17 5410458 5410758 -84093795 - AluJo SINE Alu -9 303 1 656 251 157 61 chr17 5410891 5411350 -84093203 - LTR33 LTR ERVL -9 512 10 654 330 76 45 chr17 5411390 5411836 -84092717 + L2 LINE L2 2183 2642 -672 320 78 0 0 chr17 5411862 5411913 -84092640 - AluY SINE Alu -169 132 82 1582 107 9 0 chr17 5411913 5412128 -84092425 - AluY SINE Alu -94 217 1 907 264 73 58 chr17 5412497 5412993 -84091560 - MLT1J LTR MaLR -8 503 1 1693 182 0 14 chr17 5413052 5413338 -84091215 - AluJo SINE Alu -30 282 1 294 283 55 7 chr17 5413666 5413811 -84090742 + L1M4 LINE L1 4776 4927 -1219 2043 141 7 0 chr17 5414053 5414344 -84090209 - AluSx SINE Alu -14 298 6 802 117 23 8 chr17 5414625 5414753 -84089800 - AluJb SINE Alu -7 305 176 926 154 7 20 chr17 5416556 5416705 -84087848 - FRAM SINE Alu -12 164 18 755 205 0 0 chr17 5417614 5417731 -84086822 - FLAM_C SINE Alu -25 118 2 533 287 105 17 chr17 5417836 5418017 -84086536 + MIR3 SINE MIR 9 205 -3 564 222 171 64 chr17 5418074 5418169 -84086384 - MIR SINE MIR -2 260 177 486 167 49 0 chr17 5418169 5418271 -84086282 - L1MB8 LINE L1 0 6178 6072 564 222 171 64 chr17 5418271 5418409 -84086144 - MIR SINE MIR -85 177 2 2620 48 0 0 chr17 5421586 5421898 -84082655 + AluSx SINE Alu 1 312 0 2232 83 0 16 chr17 5421904 5422218 -84082335 + AluSg SINE Alu 1 309 -1 2351 91 0 0 chr17 5422375 5422682 -84081871 + AluSx SINE Alu 3 309 -3 2040 87 45 3 chr17 5423413 5423701 -84080852 + AluSp SINE Alu 2 301 -12 307 359 65 52 chr17 5423983 5424367 -84080186 + L2 LINE L2 2864 3252 -20 700 244 144 0 chr17 5424371 5424572 -84079981 - L1MEc LINE L1 -5955 441 212 1284 111 26 5 chr17 5424580 5424770 -84079783 + AluJb SINE Alu 1 194 -118 225 0 0 0 chr17 5424809 5424834 -84079719 + (A)n Simple_repeat Simple_repeat 1 25 0 598 216 74 45 chr17 5424834 5425010 -84079543 - L1MEc LINE L1 -6177 219 39 1800 170 7 0 chr17 5425018 5425318 -84079235 - AluJb SINE Alu -10 302 1 2417 77 0 3 chr17 5425486 5425796 -84078757 - AluSq SINE Alu 0 313 5 27 0 0 0 chr17 5425806 5425833 -84078720 + AT_rich Low_complexity Low_complexity 1 27 0 413 312 57 6 chr17 5426006 5426163 -84078390 + MIR SINE MIR 24 188 -74 210 355 157 29 chr17 5426511 5426855 -84077698 + L2 LINE L2 2498 2885 -429 348 173 298 19 chr17 5426866 5426970 -84077583 - FLAM_A SINE Alu 0 133 1 622 242 124 27 chr17 5426971 5427157 -84077396 + MER63A DNA MER1_type 7 210 0 586 178 29 106 chr17 5427222 5427293 -84077260 + LTR41 LTR ERVL 580 655 -118 1808 166 0 7 chr17 5427293 5427583 -84076970 - AluJb SINE Alu -24 288 1 1971 116 0 33 chr17 5427593 5427894 -84076659 - AluSx SINE Alu -21 291 1 586 178 29 106 chr17 5427894 5428019 -84076534 + LTR41 LTR ERVL 664 771 -2 844 163 0 15 chr17 5428080 5428215 -84076338 + FLAM_C SINE Alu 1 133 0 2289 61 14 3 chr17 5428315 5428612 -84075941 + AluY SINE Alu 1 300 -11 2118 110 0 3 chr17 5428624 5428924 -84075629 + AluSc SINE Alu 1 299 -10 336 301 17 80 chr17 5429990 5430166 -84074387 + L1ME4a LINE L1 5957 6121 0 2521 61 0 0 chr17 5430491 5430801 -84073752 + AluY SINE Alu 2 311 0 2109 96 21 0 chr17 5430927 5431218 -84073335 - AluSx SINE Alu -15 297 1 305 252 47 65 chr17 5431344 5431451 -84073102 + L1MDa LINE L1 1984 2088 -4452 244 208 56 14 chr17 5432089 5432161 -84072392 - MIR SINE MIR -75 187 113 229 83 83 21 chr17 5432462 5432510 -84072043 + LTR41 LTR ERVL 711 761 -12 2107 119 0 7 chr17 5433273 5433575 -84070978 - AluSx SINE Alu -12 300 1 1252 154 32 104 chr17 5434114 5434722 -84069831 - MER4C LTR ERV1 0 465 1 405 473 64 32 chr17 5435829 5436110 -84068443 - AluSg SINE Alu -1 309 20 21 0 0 0 chr17 5436117 5436138 -84068415 + AT_rich Low_complexity Low_complexity 1 21 0 1411 108 28 9 chr17 5436146 5436358 -84068195 + AluSg/x SINE Alu 92 307 -5 410 315 71 25 chr17 5436627 5436824 -84067729 - MIR SINE MIR 0 262 57 2134 111 3 0 chr17 5437922 5438229 -84066324 + AluSx SINE Alu 1 308 -4 757 171 142 0 chr17 5438246 5438422 -84066131 + MLT1A2 LTR MaLR 174 374 0 2027 101 3 0 chr17 5438644 5438930 -84065623 + AluSx SINE Alu 1 287 -25 189 0 0 0 chr17 5438930 5438951 -84065602 + (CA)n Simple_repeat Simple_repeat 2 22 0 200 259 25 0 chr17 5439632 5439713 -84064840 + (CCCCG)n Simple_repeat Simple_repeat 4 86 0 432 324 103 5 chr17 5440064 5440268 -84064285 + MIR SINE MIR 31 254 -8 239 274 128 26 chr17 5440254 5440371 -84064182 - L2 LINE L2 -301 3012 2884 * 292 304 25 44 chr17 5440485 5440612 -84063941 + L2 LINE L2 3159 3284 -29 2291 78 0 0 chr17 5440612 5440907 -84063646 + AluSg SINE Alu 3 297 -13 292 304 25 44 chr17 5440907 5440937 -84063616 + L2 LINE L2 3284 3313 0 501 265 107 20 chr17 5440958 5441154 -84063399 - L2 LINE L2 -515 2799 2587 1559 114 125 37 chr17 5441187 5441459 -84063094 + AluSg SINE Alu 1 296 -14 2450 222 65 36 chr17 5441566 5442259 -84062294 - LTR28 LTR ERV1 0 1020 308 350 176 24 35 chr17 5442228 5442313 -84062240 - LTR1 LTR ERV1 -595 190 107 * 399 244 267 0 chr17 5442324 5442459 -84062094 - LTR28 LTR ERV1 -842 178 8 24 0 0 0 chr17 5443082 5443106 -84061447 + AT_rich Low_complexity Low_complexity 1 24 0 311 319 104 7 chr17 5443133 5443268 -84061285 - MIR SINE MIR -34 228 81 216 0 0 0 chr17 5443884 5443908 -84060645 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 319 259 126 21 chr17 5444239 5444382 -84060171 - MIR3 SINE MIR -7 201 44 192 346 38 53 chr17 5445200 5445596 -84058957 - L2 LINE L2 -427 2887 2498 198 71 0 0 chr17 5446760 5446788 -84057765 + (GCGTG)n Simple_repeat Simple_repeat 4 31 0 201 121 0 0 chr17 5447177 5447210 -84057343 + (CA)n Simple_repeat Simple_repeat 2 34 0 279 133 0 0 chr17 5447268 5447313 -84057240 + (CA)n Simple_repeat Simple_repeat 1 45 0 238 108 37 0 chr17 5447884 5447935 -84056618 - MLT-int LTR MaLR -1155 216 142 796 162 14 152 chr17 5447935 5448145 -84056408 + MLT1C LTR MaLR 210 467 0 3138 136 4 8 chr17 5448340 5448825 -84055728 + MER1A DNA MER1_type 47 529 0 549 68 0 0 chr17 5449024 5449098 -84055455 + (CA)n Simple_repeat Simple_repeat 2 75 0 2300 92 3 0 chr17 5449144 5449449 -84055104 - AluSp SINE Alu -7 306 1 213 204 23 11 chr17 5449999 5450087 -84054466 + CT-rich Low_complexity Low_complexity 1 89 0 210 222 0 0 chr17 5450397 5450442 -84054111 + G-rich Low_complexity Low_complexity 4 48 0 183 80 0 0 chr17 5450925 5450950 -84053603 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 2019 158 24 3 chr17 5451030 5451366 -84053187 + MER2 DNA MER2_type 2 344 0 257 178 10 139 chr17 5452362 5452463 -84052090 - SN5 Other centromeric -68 387 300 1305 293 43 27 chr17 5457724 5458392 -84046161 + L1MC3 LINE L1 5486 6164 -1621 464 249 60 100 chr17 5463524 5463663 -84040890 - L1MD3 LINE L1 0 7995 7852 1643 169 0 26 chr17 5463663 5463971 -84040582 + AluJo SINE Alu 1 300 -12 464 249 60 100 chr17 5463971 5464132 -84040421 - L1MD3 LINE L1 -143 7852 7707 444 173 0 37 chr17 5464326 5464407 -84040146 - AluJ/FRAM SINE Alu -15 297 220 1614 124 86 4 chr17 5464407 5464674 -84039879 + MER7A DNA MER2_type 56 342 -4 1737 142 16 50 chr17 5466289 5466425 -84038128 + AluSx SINE Alu 1 140 -172 6252 33 0 7 chr17 5466425 5467150 -84037403 + SVA Other Other 665 1384 -2 1737 142 16 50 chr17 5467150 5467330 -84037223 + AluSx SINE Alu 140 306 -6 239 222 30 30 chr17 5467594 5467736 -84036817 + (TTATA)n Simple_repeat Simple_repeat 1 142 0 222 365 117 7 chr17 5470678 5470815 -84033738 - MIR3 SINE MIR -15 193 42 686 200 113 16 chr17 5471120 5471251 -84033302 + MER3 DNA MER1_type 4 160 -49 1689 202 10 0 chr17 5471251 5471558 -84032995 - AluJb SINE Alu -2 310 1 686 200 113 16 chr17 5471558 5471611 -84032942 + MER3 DNA MER1_type 160 206 -3 31 44 0 0 chr17 5472255 5472300 -84032253 + AT_rich Low_complexity Low_complexity 1 45 0 2367 122 0 0 chr17 5472501 5472813 -84031740 + AluSx SINE Alu 1 312 0 591 206 8 23 chr17 5472839 5472970 -84031583 + FAM SINE Alu 1 46 -3 355 302 147 16 chr17 5473261 5473390 -84031163 + MIR3 SINE MIR 2 147 -61 2148 115 7 0 chr17 5473393 5473672 -84030881 + AluSq SINE Alu 1 281 -32 399 21 0 0 chr17 5473672 5473720 -84030833 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 1233 229 151 49 chr17 5473809 5473880 -84030673 - MLT1D LTR MaLR 0 505 443 2320 92 7 3 chr17 5473880 5474174 -84030379 - AluSc SINE Alu -14 295 1 1233 229 151 49 chr17 5474174 5474547 -84030006 - MLT1D LTR MaLR -62 443 16 1463 228 139 37 chr17 5474600 5474813 -84029740 + L1ME3A LINE L1 4399 4589 -1557 347 0 23 0 chr17 5474813 5474856 -84029697 + (TG)n Simple_repeat Simple_repeat 1 44 0 1463 228 139 37 chr17 5474856 5475338 -84029215 + L1ME3A LINE L1 4589 5165 -981 2293 106 0 17 chr17 5475338 5475639 -84028914 + AluSg SINE Alu 1 296 -14 817 262 84 42 chr17 5475655 5476102 -84028451 + L1ME3A LINE L1 5407 5899 -271 1909 169 3 0 chr17 5476102 5476397 -84028156 + AluJb SINE Alu 6 301 -11 817 262 84 42 chr17 5476397 5476457 -84028096 + L1ME3A LINE L1 5899 5955 -215 282 297 34 47 chr17 5476524 5476672 -84027881 + L1ME3A LINE L1 5968 6113 -57 2374 95 3 0 chr17 5476672 5476968 -84027585 - AluSp SINE Alu -16 297 1 2259 116 0 3 chr17 5477035 5477336 -84027217 - AluSg SINE Alu -10 300 1 1670 170 12 49 chr17 5478094 5478418 -84026135 - AluJo SINE Alu 0 312 1 37 52 0 0 chr17 5479104 5479162 -84025391 + AT_rich Low_complexity Low_complexity 1 58 0 2363 106 6 0 chr17 5479680 5479991 -84024562 - AluSp SINE Alu 0 313 1 2033 143 10 0 chr17 5480122 5480415 -84024138 - AluSx SINE Alu -16 296 1 35 74 0 11 chr17 5480417 5480461 -84024092 + AT_rich Low_complexity Low_complexity 1 44 -50 2302 106 0 6 chr17 5480461 5480773 -84023780 - AluSx SINE Alu -2 310 1 35 74 0 11 chr17 5480773 5480823 -84023730 + AT_rich Low_complexity Low_complexity 44 94 0 819 234 112 115 chr17 5480957 5481041 -84023512 - L2 LINE L2 -799 2515 2432 2158 95 15 0 chr17 5481041 5481314 -84023239 - AluSc SINE Alu -32 277 1 819 234 112 115 chr17 5481314 5481674 -84022879 - L2 LINE L2 -882 2432 2072 1514 155 43 0 chr17 5481682 5481960 -84022593 + AluJb SINE Alu 10 299 -13 1494 146 107 23 chr17 5482138 5482399 -84022154 + AluJo SINE Alu 30 312 0 1065 77 14 43 chr17 5482441 5482649 -84021904 - AluSc SINE Alu -15 294 2 562 170 94 9 chr17 5482689 5482795 -84021758 + MLT1B LTR MaLR 1 115 -275 1809 88 0 0 chr17 5482797 5483024 -84021529 + AluSp SINE Alu 87 313 0 1715 194 0 3 chr17 5483775 5484068 -84020485 + AluJo SINE Alu 11 302 -10 2003 128 6 16 chr17 5484314 5484627 -84019926 + AluSx SINE Alu 1 310 -2 683 135 0 45 chr17 5484709 5484820 -84019733 + AluSx SINE Alu 2 107 -205 1236 146 23 0 chr17 5484923 5485142 -84019411 + AluSx SINE Alu 85 308 -4 419 271 145 42 chr17 5485171 5485385 -84019168 + MIR SINE MIR 21 256 -6 2181 105 0 3 chr17 5485551 5485847 -84018706 + AluSx SINE Alu 1 295 -17 2285 117 0 0 chr17 5485847 5486145 -84018408 + AluSg SINE Alu 1 298 -12 2178 93 0 81 chr17 5486919 5487114 -84017439 - AluSq SINE Alu -7 306 148 2215 77 45 0 chr17 5487114 5487400 -84017153 - AluY SINE Alu -12 299 1 2178 93 0 81 chr17 5487400 5487537 -84017016 - AluSq SINE Alu -165 148 1 1994 149 0 0 chr17 5487706 5487995 -84016558 + AluJb SINE Alu 1 289 -23 2231 116 3 0 chr17 5488086 5488379 -84016174 + AluSg SINE Alu 2 295 -15 326 205 126 47 chr17 5488445 5488572 -84015981 + MLT1B LTR MaLR 2 138 -252 1492 184 0 0 chr17 5488572 5488811 -84015742 + AluJo SINE Alu 1 239 -73 539 198 0 27 chr17 5488813 5488924 -84015629 + AluJb SINE Alu 202 309 -3 268 171 26 13 chr17 5488924 5489000 -84015553 + GA-rich Low_complexity Low_complexity 1 77 0 746 199 13 0 chr17 5489163 5489319 -84015234 + MLT1B LTR MaLR 192 349 -41 236 162 0 0 chr17 5489362 5489399 -84015154 + MLT1B LTR MaLR 354 390 0 2192 76 6 51 chr17 5489460 5489775 -84014778 - AluSg SINE Alu -8 302 2 573 287 80 23 chr17 5489784 5490084 -84014469 + L1MC/D LINE L1 5479 5795 -2013 2041 129 0 17 chr17 5490096 5490391 -84014162 + AluJb SINE Alu 11 300 -12 2360 105 0 0 chr17 5490391 5490686 -84013867 + AluSp SINE Alu 1 295 -18 1289 129 0 0 chr17 5490686 5490864 -84013689 + AluSc SINE Alu 132 309 0 2371 86 0 0 chr17 5491409 5491700 -84012853 + AluSc SINE Alu 5 295 -14 622 73 0 12 chr17 5491837 5491919 -84012634 - AluJb SINE Alu -148 164 84 1988 133 25 0 chr17 5491951 5492236 -84012317 + AluSx SINE Alu 1 292 -20 26 50 0 0 chr17 5492237 5492277 -84012276 + AT_rich Low_complexity Low_complexity 1 40 0 2289 89 20 0 chr17 5492330 5492622 -84011931 + AluSp SINE Alu 1 298 -15 2354 89 3 13 chr17 5492624 5492980 -84011573 + AluY SINE Alu 1 353 0 727 85 0 19 chr17 5493320 5493426 -84011127 - AluSp/q SINE Alu -12 301 198 2412 93 0 0 chr17 5493602 5493913 -84010640 - AluSq SINE Alu -2 311 1 291 320 27 7 chr17 5493953 5494103 -84010450 + L1ME LINE L1 5517 5669 -452 1857 173 7 0 chr17 5494271 5494566 -84009987 - AluJb SINE Alu -15 297 1 346 237 12 31 chr17 5494588 5494731 -84009822 - L1MC/D LINE L1 -719 5455 5314 2261 120 3 3 chr17 5494785 5495094 -84009459 - AluSp SINE Alu -2 311 3 310 186 0 0 chr17 5495174 5495233 -84009320 - L1MB5 LINE L1 -214 5960 5902 2185 101 50 0 chr17 5495535 5495832 -84008721 - AluSq SINE Alu -1 312 1 515 152 101 0 chr17 5496380 5496479 -84008074 - AluJo/FRAM SINE Alu -1 311 203 1563 142 24 12 chr17 5496479 5496604 -84007949 - AluJb SINE Alu -53 259 137 2322 104 0 0 chr17 5496604 5496902 -84007651 - AluSc SINE Alu -10 299 2 1563 142 24 12 chr17 5496902 5497030 -84007523 - AluJb SINE Alu -175 137 3 2385 78 0 0 chr17 5497190 5497510 -84007043 + AluSq SINE Alu 1 320 0 2327 106 3 0 chr17 5497558 5497869 -84006684 + AluSq SINE Alu 1 312 -1 288 0 0 0 chr17 5498370 5498402 -84006151 + (CA)n Simple_repeat Simple_repeat 2 33 0 2018 139 10 0 chr17 5498428 5498716 -84005837 + AluJo SINE Alu 1 291 -21 259 25 50 0 chr17 5498725 5498765 -84005788 + (TTTTA)n Simple_repeat Simple_repeat 1 42 0 2279 64 0 7 chr17 5498765 5499046 -84005507 - AluY SINE Alu -32 279 1 2145 110 0 0 chr17 5499251 5499532 -84005021 - AluSg SINE Alu -19 291 11 530 273 127 0 chr17 5499567 5499732 -84004821 - MIR SINE MIR -6 256 71 2288 94 3 13 chr17 5499806 5500113 -84004440 + AluSx SINE Alu 1 304 -8 2229 114 3 13 chr17 5500293 5500600 -84003953 - AluSx SINE Alu -8 304 1 253 314 49 10 chr17 5500829 5500931 -84003622 - MIR3 SINE MIR -100 108 3 231 182 158 87 chr17 5501050 5501153 -84003400 + MIR SINE MIR 27 138 -70 1745 166 10 30 chr17 5501399 5501701 -84002852 + AluJo SINE Alu 1 296 -16 2416 93 3 3 chr17 5501704 5502017 -84002536 + AluSp SINE Alu 1 313 0 202 313 113 45 chr17 5502024 5502289 -84002264 - L2 LINE L2 -160 3112 2830 2427 100 0 0 chr17 5502410 5502711 -84001842 + AluSx SINE Alu 1 301 -11 229 245 20 0 chr17 5502713 5502762 -84001791 + MIR3 SINE MIR 136 185 -23 1987 93 58 34 chr17 5503042 5503333 -84001220 + AluSp SINE Alu 2 299 -14 1645 164 42 18 chr17 5503838 5503962 -84000591 + AluJo SINE Alu 1 120 -182 2062 130 3 29 chr17 5503962 5504099 -84000454 + AluSx SINE Alu 1 140 -172 2296 92 0 4 chr17 5504099 5504424 -84000129 + AluSq SINE Alu 5 328 0 2062 130 3 29 chr17 5504424 5504616 -83999937 + AluSx SINE Alu 140 312 0 1645 164 42 18 chr17 5504616 5504777 -83999776 + AluJo SINE Alu 120 293 -9 2579 58 0 0 chr17 5504779 5505074 -83999479 + AluY SINE Alu 1 295 -16 1932 172 0 0 chr17 5505409 5505706 -83998847 + AluJo SINE Alu 10 306 -6 2137 92 4 0 chr17 5506102 5506374 -83998179 + AluSx SINE Alu 1 273 -39 254 308 33 33 chr17 5506444 5506535 -83998018 + MIR SINE MIR 17 107 -155 743 244 0 12 chr17 5506535 5506699 -83997854 - FRAM SINE Alu -14 162 1 2569 52 0 7 chr17 5506725 5507030 -83997523 + AluY SINE Alu 1 303 -8 361 302 87 8 chr17 5507106 5507232 -83997321 - L2 LINE L2 -1 3271 3136 1143 157 0 64 chr17 5507232 5507406 -83997147 - MER58B DNA MER1_type -2086 334 177 2183 100 3 23 chr17 5507406 5507707 -83996846 - AluSx SINE Alu -17 295 1 1143 157 0 64 chr17 5507707 5507767 -83996786 - MER58B DNA MER1_type -2243 177 115 849 175 13 7 chr17 5507769 5507923 -83996630 - AluJb SINE Alu 0 312 158 895 199 55 0 chr17 5507949 5508130 -83996423 + AluJo SINE Alu 121 311 -1 247 264 0 0 chr17 5508131 5508184 -83996369 - MER58B DNA MER1_type -254 87 35 2532 68 0 3 chr17 5508235 5508544 -83996009 + AluSx SINE Alu 1 308 -4 2150 86 59 3 chr17 5508617 5508907 -83995646 + AluSq SINE Alu 1 306 -7 1243 187 19 100 chr17 5508934 5509244 -83995309 + AluJb SINE Alu 2 286 -16 1878 135 0 10 chr17 5509645 5509933 -83994620 - AluSq SINE Alu -28 285 1 2302 58 4 7 chr17 5512508 5512784 -83991769 - AluSg SINE Alu -33 277 3 274 213 52 29 chr17 5513142 5513278 -83991275 + (CCCCG)n Simple_repeat Simple_repeat 5 143 0 201 74 0 0 chr17 5513475 5513502 -83991051 + (CTTG)n Simple_repeat Simple_repeat 1 27 0 2289 91 0 0 chr17 5513502 5513778 -83990775 - AluSg SINE Alu -28 282 4 518 228 179 19 chr17 5513879 5514041 -83990512 - MIR SINE MIR -44 218 31 1684 186 23 3 chr17 5514135 5514256 -83990297 + AluJo SINE Alu 1 118 -194 189 0 0 0 chr17 5514256 5514277 -83990276 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1684 186 23 3 chr17 5514277 5514461 -83990092 + AluJo SINE Alu 118 312 0 2356 82 23 3 chr17 5514655 5514960 -83989593 - AluSx SINE Alu -1 311 1 2306 93 0 0 chr17 5515533 5515851 -83988702 + AluSc SINE Alu 1 318 0 1806 178 3 13 chr17 5515864 5516167 -83988386 + AluJb SINE Alu 13 312 0 2332 113 0 0 chr17 5516173 5516473 -83988080 + AluSq SINE Alu 1 300 -13 1628 146 103 11 chr17 5516981 5517262 -83987291 - AluJo SINE Alu -5 307 1 436 249 45 119 chr17 5517315 5517400 -83987153 + MIR SINE MIR 47 137 -125 710 197 31 0 chr17 5517400 5517527 -83987026 + FLAM_A SINE Alu 1 131 -2 2231 105 0 3 chr17 5517529 5517815 -83986738 + AluSx SINE Alu 1 314 0 186 35 69 0 chr17 5517815 5517844 -83986709 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 436 249 45 119 chr17 5517844 5517931 -83986622 + MIR SINE MIR 138 210 -52 808 159 0 51 chr17 5518015 5518153 -83986400 - FLAM_C SINE Alu -12 131 1 1697 153 34 3 chr17 5518197 5518491 -83986062 - AluJb SINE Alu -9 303 1 2143 82 0 23 chr17 5519123 5519427 -83985126 - AluY SINE Alu -14 297 1 2209 113 0 0 chr17 5520001 5520310 -83984243 + AluSq SINE Alu 1 309 -4 303 124 101 34 chr17 5520310 5520366 -83984187 - LTR37A LTR ERV1 -8 418 352 1499 116 0 0 chr17 5520366 5520573 -83983980 + AluSg/x SINE Alu 85 291 -21 303 124 101 34 chr17 5520573 5520605 -83983948 - LTR37A LTR ERV1 -74 352 324 347 107 0 0 chr17 5520611 5520667 -83983886 + Alu SINE Alu 247 302 0 686 193 33 82 chr17 5520673 5520744 -83983809 - LTR37A LTR ERV1 -111 315 242 4423 131 68 30 chr17 5520744 5520913 -83983640 + LTR39 LTR ERV1 1 162 -621 1998 111 0 20 chr17 5520913 5521244 -83983309 + AluSx SINE Alu 1 312 0 4423 131 68 30 chr17 5521244 5521659 -83982894 + LTR39 LTR ERV1 162 622 -161 2398 81 0 0 chr17 5521659 5521967 -83982586 + AluSx SINE Alu 1 308 -4 4423 131 68 30 chr17 5521967 5522136 -83982417 + LTR39 LTR ERV1 622 783 0 686 193 33 82 chr17 5522136 5522307 -83982246 - LTR37A LTR ERV1 -184 242 85 3184 123 35 0 chr17 5522323 5522785 -83981768 + MER1A DNA MER1_type 37 514 -15 1969 87 21 24 chr17 5522908 5523196 -83981357 - AluSc SINE Alu -14 295 9 897 169 38 0 chr17 5523220 5523380 -83981173 - FRAM SINE Alu 0 166 1 2368 57 0 10 chr17 5523909 5524208 -83980345 + AluSg SINE Alu 4 299 -11 2580 162 19 71 chr17 5524432 5524461 -83980092 + L1MB2 LINE L1 5446 5475 -696 222 37 0 0 chr17 5524461 5524488 -83980065 + (CA)n Simple_repeat Simple_repeat 2 28 0 2580 162 19 71 chr17 5524488 5524824 -83979729 + L1MB2 LINE L1 5475 5827 -344 2222 91 0 0 chr17 5524824 5525120 -83979433 + AluSx SINE Alu 1 296 -16 2580 162 19 71 chr17 5525120 5525243 -83979310 + L1MB2 LINE L1 5827 5901 -270 2272 96 0 0 chr17 5525243 5525536 -83979017 + AluSx SINE Alu 3 295 -17 2580 162 19 71 chr17 5525536 5525633 -83978920 + L1MB2 LINE L1 5901 6002 -169 22 70 0 0 chr17 5525692 5525735 -83978818 + AT_rich Low_complexity Low_complexity 1 43 0 1452 139 7 85 chr17 5525735 5525785 -83978768 + Tigger2 DNA MER2_type 2446 2498 -220 2107 88 12 34 chr17 5525785 5526105 -83978448 - AluSp SINE Alu 0 313 1 2029 133 3 0 chr17 5526105 5526406 -83978147 - AluSx SINE Alu -10 302 1 1452 139 7 85 chr17 5526406 5526649 -83977904 + Tigger2 DNA MER2_type 2496 2717 -1 194 200 160 20 chr17 5526667 5526717 -83977836 + L2 LINE L2 3024 3080 -233 697 239 133 70 chr17 5526717 5527007 -83977546 + L1MEc LINE L1 805 1140 -5256 2263 91 7 0 chr17 5527007 5527316 -83977237 + AluSp SINE Alu 1 311 -2 697 239 133 70 chr17 5527316 5527523 -83977030 + L1MEc LINE L1 1140 1333 -5063 2025 128 3 0 chr17 5527863 5528161 -83976392 + AluSx SINE Alu 1 299 -13 2352 87 3 0 chr17 5528218 5528529 -83976024 - AluSx SINE Alu 0 312 1 948 208 16 0 chr17 5528879 5529000 -83975553 + AluJo SINE Alu 1 127 -185 365 0 22 0 chr17 5529000 5529045 -83975508 + (CA)n Simple_repeat Simple_repeat 2 47 0 948 208 16 0 chr17 5529045 5529106 -83975447 + AluJo SINE Alu 127 186 -126 805 93 0 0 chr17 5529124 5529231 -83975322 - AluSq/x SINE Alu -202 111 5 2129 87 7 13 chr17 5529616 5529915 -83974638 + AluSg SINE Alu 5 301 -9 945 186 0 0 chr17 5529917 5530078 -83974475 + AluJb SINE Alu 136 296 -16 1701 179 0 3 chr17 5530084 5530380 -83974173 + AluJo SINE Alu 5 299 -13 466 315 55 0 chr17 5530449 5530595 -83973958 + L2 LINE L2 3159 3312 -1 2321 90 0 7 chr17 5531102 5531412 -83973141 - AluSx SINE Alu -3 309 2 674 173 17 12 chr17 5531534 5531707 -83972846 + CT-rich Low_complexity Low_complexity 5 178 0 615 163 10 0 chr17 5531745 5531843 -83972710 - AluJ/FLAM SINE Alu -212 100 2 1609 161 39 7 chr17 5532358 5532483 -83972070 + AluJo SINE Alu 3 123 -189 270 0 0 0 chr17 5532483 5532513 -83972040 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1609 161 39 7 chr17 5532513 5532672 -83971881 + AluJo SINE Alu 123 296 -16 2167 198 24 67 chr17 5532680 5532795 -83971758 + LTR31 LTR ERV1 76 194 -425 2198 100 10 10 chr17 5532795 5533104 -83971449 + AluSq SINE Alu 1 309 -4 2167 198 24 67 chr17 5533104 5533490 -83971063 + LTR31 LTR ERV1 194 553 -66 2449 40 3 7 chr17 5533490 5533790 -83970763 + AluY SINE Alu 1 299 -12 2167 198 24 67 chr17 5533790 5533838 -83970715 + LTR31 LTR ERV1 553 602 -17 254 256 70 0 chr17 5534071 5534157 -83970396 + (CAGTG)n Simple_repeat Simple_repeat 4 95 0 1959 127 3 7 chr17 5534423 5534723 -83969830 - AluSx SINE Alu -8 304 6 2129 112 0 0 chr17 5535091 5535387 -83969166 - AluSc SINE Alu -13 296 1 2282 57 0 0 chr17 5535729 5536011 -83968542 + AluSq SINE Alu 25 306 -7 386 224 66 3 chr17 5536152 5536291 -83968262 - MIR SINE MIR -70 138 45 2043 109 0 0 chr17 5537393 5537701 -83966852 + AluSx SINE Alu 1 308 0 2117 108 17 0 chr17 5537724 5538020 -83966533 + AluSx SINE Alu 1 301 -11 280 252 49 119 chr17 5538359 5538455 -83966098 - MIR SINE MIR -110 152 51 2135 91 0 27 chr17 5538455 5538627 -83965926 - AluSx SINE Alu -12 300 125 228 35 0 0 chr17 5538627 5538656 -83965897 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2143 87 0 14 chr17 5538656 5538943 -83965610 - AluY SINE Alu -28 283 1 2135 91 0 27 chr17 5538943 5539067 -83965486 - AluSx SINE Alu -185 127 11 280 252 49 119 chr17 5539067 5539113 -83965440 - MIR SINE MIR -211 51 20 1224 125 0 0 chr17 5539164 5539340 -83965213 + AluSg/x SINE Alu 130 305 -5 2020 125 0 13 chr17 5539997 5540302 -83964251 - AluSx SINE Alu -11 301 1 560 306 151 39 chr17 5540380 5540871 -83963682 - L3 LINE CR1 -65 1512 967 2179 78 7 0 chr17 5540893 5541187 -83963366 - AluY SINE Alu -15 296 1 256 146 0 0 chr17 5541187 5541228 -83963325 - L1ME LINE L1 -342 5828 5788 1164 90 0 0 chr17 5541235 5541390 -83963163 - AluY SINE Alu -18 293 139 275 272 87 0 chr17 5541412 5541504 -83963049 - L1ME LINE L1 -402 5768 5669 265 210 51 53 chr17 5541578 5541672 -83962881 - L1ME LINE L1 -423 5698 5606 1877 102 58 10 chr17 5541876 5542171 -83962382 - AluSx SINE Alu -3 309 1 1001 241 86 80 chr17 5542405 5542484 -83962069 - MER115 DNA AcHobo -2 691 614 1989 125 3 13 chr17 5542484 5542795 -83961758 + AluSx SINE Alu 5 312 0 1001 241 86 80 chr17 5542795 5543101 -83961452 - MER115 DNA AcHobo -79 614 304 2052 86 14 4 chr17 5543199 5543494 -83961059 - AluSg1 SINE Alu 0 298 1 2905 37 3 0 chr17 5543502 5543851 -83960702 - L1PA8 LINE L1 -6 6166 5817 250 278 0 0 chr17 5543932 5543986 -83960567 - MER115 DNA AcHobo -484 209 156 2313 78 0 0 chr17 5544086 5544382 -83960171 + AluSg SINE Alu 1 296 -14 201 238 313 0 chr17 5544528 5544608 -83959945 + L2 LINE L2 3205 3309 -4 305 249 96 47 chr17 5544694 5544843 -83959710 - MIR3 SINE MIR -65 143 1 249 53 0 211 chr17 5544946 5545077 -83959476 + (TCCC)n Simple_repeat Simple_repeat 1 103 0 21 114 0 0 chr17 5545463 5545568 -83958985 + GC_rich Low_complexity Low_complexity 1 105 0 180 296 170 59 chr17 5545890 5546025 -83958528 + MIR3 SINE MIR 2 151 -57 1753 157 3 3 chr17 5547336 5547635 -83956918 - AluJb SINE Alu -13 299 1 22 0 0 0 chr17 5547841 5547863 -83956690 + AT_rich Low_complexity Low_complexity 1 22 0 793 155 31 0 chr17 5548172 5548301 -83956252 - FLAM_C SINE Alu 0 133 1 592 274 47 16 chr17 5548477 5548667 -83955886 - MIR SINE MIR -30 232 37 308 302 81 53 chr17 5548690 5549056 -83955497 - L1MC/D LINE L1 -321 5800 5466 2176 97 0 0 chr17 5549083 5549373 -83955180 + AluSg SINE Alu 1 290 -20 386 270 30 20 chr17 5549381 5549481 -83955072 - L2 LINE L2 -2 3270 3170 1501 250 54 44 chr17 5549537 5550199 -83954354 - L2 LINE L2 -4 3309 2655 2218 95 0 0 chr17 5550199 5550493 -83954060 + AluSx SINE Alu 14 307 -5 1501 250 54 44 chr17 5550493 5550507 -83954046 - L2 LINE L2 -658 2655 2643 1751 144 28 11 chr17 5550507 5550791 -83953762 + AluJb SINE Alu 4 292 -20 1501 250 54 44 chr17 5550791 5551004 -83953549 - L2 LINE L2 -670 2643 2410 196 311 33 0 chr17 5551036 5551097 -83953456 - L2 LINE L2 -215 3057 2995 201 316 0 0 chr17 5551192 5551249 -83953304 - L2 LINE L2 -540 2774 2718 2097 125 3 0 chr17 5551253 5551564 -83952989 - AluSx SINE Alu 0 312 1 1888 143 0 7 chr17 5551566 5551873 -83952680 - AluSx SINE Alu -5 307 3 196 148 0 37 chr17 5551952 5552006 -83952547 + (TTTC)n Simple_repeat Simple_repeat 2 53 0 194 91 30 0 chr17 5552031 5552064 -83952489 + CT-rich Low_complexity Low_complexity 3 36 0 310 247 134 16 chr17 5552088 5552304 -83952249 - L1MC/D LINE L1 -788 5358 5118 552 210 22 29 chr17 5552448 5552586 -83951967 - LTR41 LTR ERVL -43 730 594 2389 54 0 3 chr17 5552961 5553257 -83951296 - AluY SINE Alu -16 295 1 1338 200 3 10 chr17 5553464 5553754 -83950799 - AluSx SINE Alu -14 298 11 1959 122 0 10 chr17 5553999 5554293 -83950260 + AluSg SINE Alu 2 292 -18 25 51 0 0 chr17 5554317 5554356 -83950197 + AT_rich Low_complexity Low_complexity 1 39 0 270 296 145 48 chr17 5554370 5554495 -83950058 - L1ME4a LINE L1 -187 5934 5822 1750 138 18 7 chr17 5554495 5554778 -83949775 + AluSx SINE Alu 1 286 -26 270 296 145 48 chr17 5554778 5555129 -83949424 - L1ME4a LINE L1 -299 5822 5412 23 0 0 0 chr17 5555173 5555196 -83949357 + AT_rich Low_complexity Low_complexity 1 23 0 1895 139 17 0 chr17 5555251 5555553 -83949000 - AluSx SINE Alu -5 307 1 1408 194 20 17 chr17 5555553 5555846 -83948707 - AluJb SINE Alu -13 299 6 1985 117 10 24 chr17 5555877 5556175 -83948378 + AluSp SINE Alu 1 294 -19 1382 171 89 0 chr17 5556307 5556576 -83947977 - AluJb SINE Alu -19 293 1 22 56 0 0 chr17 5556835 5556871 -83947682 + AT_rich Low_complexity Low_complexity 1 36 0 355 234 0 0 chr17 5556953 5557017 -83947536 - MER2 DNA MER2_type 0 345 282 1597 124 54 0 chr17 5557021 5557280 -83947273 + AluSg SINE Alu 37 309 -1 999 143 0 0 chr17 5557287 5557448 -83947105 - MER2 DNA MER2_type -134 211 51 239 248 114 78 chr17 5557591 5557671 -83946882 - L1ME LINE L1 -219 5902 5826 2014 115 0 23 chr17 5557671 5557975 -83946578 + AluSx SINE Alu 1 297 -15 239 248 114 78 chr17 5557975 5558201 -83946352 - L1ME LINE L1 -295 5826 5585 329 265 82 18 chr17 5558428 5558598 -83945955 - HAL1b LINE L1 -1092 256 76 454 300 65 39 chr17 5558647 5558836 -83945717 - L1ME LINE L1 -2289 3857 3655 2085 112 10 0 chr17 5558836 5559132 -83945421 - AluSp SINE Alu -14 299 1 454 300 65 39 chr17 5559132 5559249 -83945304 - L1ME LINE L1 -2491 3655 3543 419 249 11 62 chr17 5559275 5559307 -83945246 - L1ME LINE L1 -327 5794 5762 1510 182 30 13 chr17 5559307 5559609 -83944944 - AluJb SINE Alu -5 307 1 419 249 11 62 chr17 5559609 5559753 -83944800 - L1ME LINE L1 -359 5762 5627 422 284 105 12 chr17 5560068 5560230 -83944323 + MIR SINE MIR 29 205 -57 474 189 277 14 chr17 5560267 5560415 -83944138 - MIR SINE MIR -71 191 5 298 182 268 71 chr17 5561179 5561228 -83943325 - L1MC5 LINE L1 -122 7839 7801 2465 50 0 0 chr17 5561228 5561526 -83943027 - AluY SINE Alu -13 298 1 298 182 268 71 chr17 5561526 5561674 -83942879 - L1MC5 LINE L1 -160 7801 7603 915 166 137 66 chr17 5561732 5561943 -83942610 - L1MC5 LINE L1 -1053 6908 6683 2232 97 0 0 chr17 5562291 5562599 -83941954 - AluSc SINE Alu -1 308 1 1570 180 80 43 chr17 5562771 5563144 -83941409 - L1MC3 LINE L1 -246 7539 7153 721 330 65 57 chr17 5563329 5563450 -83941103 - LTR67 LTR ERVL -9 548 429 806 184 107 6 chr17 5563450 5563618 -83940935 - MER5A DNA MER1_type -3 186 2 721 330 65 57 chr17 5563618 5564005 -83940548 - LTR67 LTR ERVL -128 429 36 180 345 0 0 chr17 5564261 5564319 -83940234 + L3 LINE CR1 563 620 -957 470 323 81 44 chr17 5564380 5564724 -83939829 + L3 LINE CR1 850 1206 -371 1944 138 0 0 chr17 5564816 5565113 -83939440 - AluSx SINE Alu -15 297 1 22 56 0 0 chr17 5565147 5565183 -83939370 + AT_rich Low_complexity Low_complexity 1 36 0 1038 168 16 0 chr17 5565215 5565400 -83939153 - AluJo SINE Alu -124 188 1 1664 188 0 0 chr17 5565804 5566114 -83938439 - AluSx SINE Alu 0 310 1 2232 102 0 3 chr17 5566324 5566628 -83937925 + AluSq SINE Alu 2 304 -9 2023 126 3 10 chr17 5566869 5567171 -83937382 + AluSq SINE Alu 1 300 -13 1023 152 92 0 chr17 5568625 5568809 -83935744 - Tigger5 DNA MER2_type -2 2321 2121 2260 98 0 0 chr17 5568917 5569213 -83935340 + AluSx SINE Alu 1 296 -16 390 112 10 71 chr17 5569402 5569500 -83935053 - Tigger5 DNA MER2_type -192 2131 2040 306 307 113 20 chr17 5569545 5569608 -83934945 - L1ME4a LINE L1 -2 6119 6063 2114 105 3 0 chr17 5569608 5569893 -83934660 + AluSx SINE Alu 1 286 -26 306 307 113 20 chr17 5569893 5569979 -83934574 - L1ME4a LINE L1 -58 6063 5956 2402 80 0 0 chr17 5570798 5571098 -83933455 - AluSx SINE Alu -12 300 1 187 280 13 40 chr17 5571766 5571841 -83932712 - L2 LINE L2 0 3272 3200 2241 86 3 16 chr17 5571940 5572253 -83932300 + AluSp SINE Alu 1 309 -4 571 211 12 62 chr17 5572376 5572537 -83932016 + MER5A DNA MER1_type 1 153 -36 464 255 235 7 chr17 5572550 5572703 -83931850 - MER5A DNA MER1_type -1 188 1 418 262 100 47 chr17 5572739 5572874 -83931679 - Charlie2 DNA MER1_type -40 2822 2696 1961 82 33 59 chr17 5572874 5573180 -83931373 - AluSg SINE Alu -12 298 1 418 262 100 47 chr17 5573180 5573365 -83931188 - Charlie2 DNA MER1_type -166 2696 2485 2225 103 0 0 chr17 5573372 5573674 -83930879 - AluSx SINE Alu -2 310 9 648 286 29 6 chr17 5573680 5573851 -83930702 - MER5A DNA MER1_type -14 175 1 25 0 0 0 chr17 5573915 5573940 -83930613 + AT_rich Low_complexity Low_complexity 1 25 0 2240 73 7 17 chr17 5574548 5574848 -83929705 - AluY SINE Alu -14 297 1 1534 116 151 12 chr17 5575210 5575469 -83929084 + AluSx SINE Alu 1 295 -17 329 276 32 8 chr17 5575534 5575657 -83928896 + L1ME3 LINE L1 6035 6160 -2 195 42 0 0 chr17 5575827 5575851 -83928702 + (CAGA)n Simple_repeat Simple_repeat 4 27 0 2209 80 3 23 chr17 5577065 5577365 -83927188 + AluSc SINE Alu 1 294 -15 500 268 95 6 chr17 5577380 5577548 -83927005 - MER5A DNA MER1_type 0 189 7 296 321 291 0 chr17 5578398 5578563 -83925990 + MIR SINE MIR 46 258 -4 1768 169 0 7 chr17 5578609 5578904 -83925649 + AluJo SINE Alu 6 298 -14 2271 85 10 10 chr17 5578910 5579216 -83925337 + AluSx SINE Alu 1 306 -6 222 309 52 41 chr17 5580896 5580993 -83923560 - L2 LINE L2 -14 3258 3161 393 302 18 62 chr17 5581476 5581658 -83922895 - L2 LINE L2 0 3313 3141 2041 76 6 111 chr17 5581658 5582001 -83922552 - AluSp SINE Alu -6 307 1 393 302 18 62 chr17 5582001 5582043 -83922510 - L2 LINE L2 -172 3141 3099 2080 154 0 0 chr17 5582105 5582417 -83922136 + AluJb SINE Alu 1 312 0 398 277 53 71 chr17 5582513 5582695 -83921858 + MIR SINE MIR 1 178 -30 2470 45 3 16 chr17 5582783 5583095 -83921458 + AluY SINE Alu 1 308 -3 2163 105 7 7 chr17 5583463 5583759 -83920794 - AluSx SINE Alu -11 301 6 1118 74 0 0 chr17 5583835 5583970 -83920583 + AluSg SINE Alu 1 135 -175 1957 94 80 0 chr17 5583970 5584245 -83920308 + AluSx SINE Alu 1 297 -15 2257 93 7 13 chr17 5584493 5584803 -83919750 + AluSx SINE Alu 4 311 -1 2326 83 3 6 chr17 5584803 5585116 -83919437 + AluSp SINE Alu 1 313 0 654 246 129 26 chr17 5585653 5585885 -83918668 - MIR SINE MIR -3 259 4 483 277 43 5 chr17 5589208 5589396 -83915157 + L1MC4a LINE L1 5362 5556 -2252 1328 81 0 0 chr17 5589401 5589573 -83914980 + AluY SINE Alu 126 297 -14 601 257 87 52 chr17 5589583 5589628 -83914925 + L1MC4a LINE L1 5555 5597 -537 2461 38 3 0 chr17 5589628 5589919 -83914634 - AluY SINE Alu -19 292 1 601 257 87 52 chr17 5589919 5590145 -83914408 + L1MC4a LINE L1 5597 5832 -302 1995 134 3 3 chr17 5590160 5590459 -83914094 + AluSx SINE Alu 1 299 -13 2302 86 3 0 chr17 5590578 5590879 -83913674 - AluY SINE Alu -9 302 1 2009 129 3 3 chr17 5590908 5591202 -83913351 + AluSg SINE Alu 1 294 -16 203 254 15 60 chr17 5592183 5592250 -83912303 - L2 LINE L2 -1 3312 3249 194 347 0 0 chr17 5592301 5592376 -83912177 + L2 LINE L2 2971 3045 -227 467 333 41 31 chr17 5593549 5593744 -83910809 - L3 LINE CR1 -7 1570 1374 2211 89 10 0 chr17 5593750 5594041 -83910512 + AluSx SINE Alu 1 294 -18 700 156 18 0 chr17 5594051 5594160 -83910393 + AluSq/x SINE Alu 1 111 -201 2193 96 3 0 chr17 5594170 5594461 -83910092 - AluSx SINE Alu -20 292 1 1478 92 0 0 chr17 5594463 5594658 -83909895 + AluSc SINE Alu 103 297 -12 528 325 211 12 chr17 5594658 5595264 -83909289 - L3 LINE CR1 -199 1378 652 2223 98 0 31 chr17 5597039 5597357 -83907196 + AluSx SINE Alu 1 308 -4 426 296 84 28 chr17 5598025 5598204 -83906349 - MIR SINE MIR -41 221 33 488 298 136 5 chr17 5598395 5598593 -83905960 - MIR SINE MIR -35 227 4 223 333 11 11 chr17 5598708 5598798 -83905755 - MIR3 SINE MIR -116 92 3 26 50 0 0 chr17 5602329 5602369 -83902184 + GC_rich Low_complexity Low_complexity 1 40 0 227 283 7 36 chr17 5602379 5602517 -83902036 + G-rich Low_complexity Low_complexity 1 134 0 2211 75 51 0 chr17 5603691 5603986 -83900567 - AluSx SINE Alu -2 310 1 1672 151 37 27 chr17 5603986 5604283 -83900270 - AluJb SINE Alu -11 301 1 2402 86 0 3 chr17 5604425 5604738 -83899815 - AluSp SINE Alu -1 312 1 831 152 0 23 chr17 5604741 5604873 -83899680 - AluJo/FLAM SINE Alu -173 129 1 2135 105 7 0 chr17 5605168 5605462 -83899091 - AluSx SINE Alu -16 296 1 2390 89 0 0 chr17 5605572 5605876 -83898677 - AluSg SINE Alu -6 304 1 605 271 90 0 chr17 5606124 5606312 -83898241 - L2 LINE L2 0 3313 3109 2389 89 0 0 chr17 5606314 5606618 -83897935 + AluSx SINE Alu 1 304 -8 2296 65 3 3 chr17 5606618 5606908 -83897645 + AluY SINE Alu 1 290 -21 2247 94 7 0 chr17 5606908 5607206 -83897347 + AluSp SINE Alu 1 300 -13 2231 107 0 0 chr17 5607206 5607506 -83897047 + AluSq SINE Alu 1 300 -13 874 220 0 0 chr17 5607512 5607671 -83896882 + FRAM SINE Alu 1 159 -17 191 105 53 0 chr17 5607685 5607723 -83896830 + GA-rich Low_complexity Low_complexity 1 40 0 288 77 0 0 chr17 5607730 5607769 -83896784 + (GGGGA)n Simple_repeat Simple_repeat 4 42 0 2049 123 10 7 chr17 5607802 5608104 -83896449 + AluJo SINE Alu 1 303 -9 467 240 34 17 chr17 5608176 5608355 -83896198 - L1MC5 LINE L1 -36 7925 7744 905 284 251 15 chr17 5608360 5608878 -83895675 - L2 LINE L2 -618 2696 2057 957 90 298 6 chr17 5609086 5609168 -83895385 - MER30 DNA MER1_type 0 230 173 2281 89 10 0 chr17 5609168 5609472 -83895081 + AluSq SINE Alu 1 307 -6 2288 76 0 16 chr17 5609482 5609786 -83894767 - AluSq SINE Alu -14 299 1 957 90 298 6 chr17 5609786 5609870 -83894683 - MER30 DNA MER1_type -63 167 1 2291 100 0 0 chr17 5614662 5614963 -83889590 + AluSx SINE Alu 1 301 -11 428 360 7 7 chr17 5615034 5615187 -83889366 - MIR SINE MIR -21 241 89 1250 88 0 0 chr17 5615190 5615349 -83889204 - AluSp SINE Alu -21 292 134 2245 87 7 0 chr17 5615349 5615647 -83888906 - AluSg SINE Alu -10 300 1 2284 68 0 0 chr17 5616137 5616443 -83888110 + AluY SINE Alu 2 307 0 2153 124 0 0 chr17 5616502 5616801 -83887752 + AluSx SINE Alu 1 299 -13 2319 71 3 10 chr17 5616803 5617100 -83887453 + AluSq SINE Alu 3 297 -16 216 163 0 0 chr17 5620439 5620482 -83884071 + C-rich Low_complexity Low_complexity 5 47 0 2448 68 10 0 chr17 5620848 5621157 -83883396 - AluSq SINE Alu -1 312 1 539 327 125 11 chr17 5621310 5621591 -83882962 + L3 LINE CR1 1191 1503 -74 334 299 0 11 chr17 5621616 5621703 -83882850 + L2 LINE L2 3187 3272 0 384 347 18 24 chr17 5622042 5622212 -83882341 + MIR3 SINE MIR 17 185 -23 1101 178 66 5 chr17 5622318 5622515 -83882038 - MER3 DNA MER1_type 0 209 1 2128 122 0 6 chr17 5623657 5623969 -83880584 - AluSx SINE Alu -2 310 1 266 243 66 44 chr17 5623998 5624080 -83880473 - L1ME4a LINE L1 0 6121 6033 2349 90 0 0 chr17 5624080 5624379 -83880174 + AluSx SINE Alu 1 299 -13 266 243 66 44 chr17 5624379 5624432 -83880121 - L1ME4a LINE L1 -88 6033 5983 302 383 82 27 chr17 5624912 5625168 -83879385 - L1M4c LINE L1 -5180 1204 935 1990 148 7 0 chr17 5628397 5628701 -83875852 + AluSx SINE Alu 1 306 -6 1520 171 45 21 chr17 5628741 5629027 -83875526 + AluJo SINE Alu 1 293 -19 333 269 48 58 chr17 5633951 5634055 -83870498 - MIR SINE MIR -156 106 4 1667 155 10 39 chr17 5634108 5634248 -83870305 + AluJb SINE Alu 1 144 -168 2175 64 0 0 chr17 5634248 5634559 -83869994 + AluSc SINE Alu 14 324 0 1667 155 10 39 chr17 5634559 5634726 -83869827 + AluJb SINE Alu 144 300 -12 290 276 69 26 chr17 5634755 5634871 -83869682 - L2 LINE L2 -25 3288 3168 215 214 36 0 chr17 5634973 5635029 -83869524 - L2 LINE L2 -289 2983 2926 2053 94 3 14 chr17 5635050 5635173 -83869380 + AluSx SINE Alu 14 137 -175 2322 87 0 10 chr17 5635173 5635483 -83869070 + AluSp SINE Alu 1 307 -6 2053 94 3 14 chr17 5635483 5635647 -83868906 + AluSx SINE Alu 137 298 -14 2535 52 0 0 chr17 5635725 5636030 -83868523 + AluY SINE Alu 1 305 -6 460 188 47 0 chr17 5636298 5636383 -83868170 - AluJ/FLAM SINE Alu -221 91 3 2446 79 0 0 chr17 5636629 5636934 -83867619 + AluSg SINE Alu 1 305 -5 187 286 0 0 chr17 5636952 5637001 -83867552 + L2 LINE L2 3190 3238 -75 1367 165 189 0 chr17 5637021 5637275 -83867278 - AluJo SINE Alu 0 302 1 798 229 40 63 chr17 5637321 5637544 -83867009 + AluJo SINE Alu 3 220 -92 338 90 5 5 chr17 5637551 5637742 -83866811 + AluSg SINE Alu 14 301 0 1139 164 5 55 chr17 5637750 5637969 -83866584 + AluJb SINE Alu 84 291 -21 2223 103 0 3 chr17 5637971 5638271 -83866282 + AluSx SINE Alu 1 299 -13 274 323 54 31 chr17 5638334 5638424 -83866129 + L2 LINE L2 3137 3223 -49 1759 118 56 59 chr17 5638424 5638597 -83865956 + MER44D DNA MER2_type 1 173 -2318 2335 76 0 32 chr17 5638597 5638912 -83865641 - AluY SINE Alu -6 305 1 2304 84 7 0 chr17 5638913 5639210 -83865343 - AluSq SINE Alu -14 299 1 1759 118 56 59 chr17 5639210 5639373 -83865180 + MER44D DNA MER2_type 172 608 -1 274 323 54 31 chr17 5639373 5639412 -83865141 + L2 LINE L2 3223 3269 -3 2194 111 0 3 chr17 5641294 5641600 -83862953 - AluSx SINE Alu -7 305 1 817 165 15 0 chr17 5641641 5641774 -83862779 + AluJo SINE Alu 1 135 -177 1593 150 27 60 chr17 5641774 5642074 -83862479 + AluJo SINE Alu 1 290 -22 738 310 15 5 chr17 5642078 5642278 -83862275 + MIR SINE MIR 19 220 -42 2498 58 3 3 chr17 5642293 5642602 -83861951 - AluSp SINE Alu -4 309 1 1122 148 0 0 chr17 5642830 5643006 -83861547 - FRAM SINE Alu -1 175 1 591 64 86 0 chr17 5644460 5644600 -83859953 + (CAGAGA)n Simple_repeat Simple_repeat 1 152 0 476 219 64 97 chr17 5645360 5645463 -83859090 + MIR SINE MIR 25 130 -132 2153 79 59 0 chr17 5645463 5645753 -83858800 - AluSg SINE Alu -3 307 1 476 219 64 97 chr17 5645753 5645866 -83858687 + MIR SINE MIR 130 235 -27 * 1055 194 38 13 chr17 5645860 5646097 -83858456 - MIR SINE MIR -1 261 19 230 250 107 0 chr17 5646831 5646915 -83857638 + L2 LINE L2 3175 3267 -5 1990 104 7 31 chr17 5647624 5647763 -83856790 + AluSx SINE Alu 1 142 -163 2276 32 72 0 chr17 5647763 5648042 -83856511 + AluY SINE Alu 1 299 -12 1990 104 7 31 chr17 5648042 5648214 -83856339 + AluSx SINE Alu 142 305 0 258 238 33 25 chr17 5650276 5650398 -83854155 + C-rich Low_complexity Low_complexity 2 124 0 23 78 0 0 chr17 5651373 5651424 -83853129 + GC_rich Low_complexity Low_complexity 1 51 0 22 56 0 0 chr17 5652374 5652410 -83852143 + GC_rich Low_complexity Low_complexity 1 36 0 193 303 131 7 chr17 5653851 5653996 -83850557 + MIR3 SINE MIR 25 187 -21 1524 187 11 0 chr17 5656369 5656647 -83847906 - AluJb SINE Alu -5 307 27 687 117 0 100 chr17 5656652 5656772 -83847781 - AluJb SINE Alu -204 108 1 1672 112 0 0 chr17 5658444 5658676 -83845877 - AluSg/x SINE Alu -5 307 76 229 62 0 0 chr17 5658676 5658708 -83845845 - Alu SINE Alu -268 32 1 400 263 76 35 chr17 5658763 5658934 -83845619 - MIR SINE MIR -17 245 68 248 286 0 16 chr17 5659161 5659224 -83845329 + GA-rich Low_complexity Low_complexity 4 65 0 1720 163 3 3 chr17 5664764 5665053 -83839500 - AluJb SINE Alu -23 289 1 2255 108 0 0 chr17 5665058 5665365 -83839188 - AluSx SINE Alu -5 307 1 337 313 43 0 chr17 5665371 5665534 -83839019 - L1ME4a LINE L1 -2 6119 5950 207 280 60 24 chr17 5666395 5666563 -83837990 + (TTGGGG)n Simple_repeat Simple_repeat 3 176 0 483 323 127 26 chr17 5668226 5668254 -83836299 + L2 LINE L2 1685 1709 -1605 2226 71 17 14 chr17 5668254 5668549 -83836004 + AluSp SINE Alu 1 296 -17 483 323 127 26 chr17 5668549 5668947 -83835606 + L2 LINE L2 1709 2154 -1160 1105 106 0 0 chr17 5668950 5669091 -83835462 - AluSq/x SINE Alu -170 142 2 852 295 70 48 chr17 5669092 5669594 -83834959 + L2 LINE L2 2152 2664 -650 1701 103 0 4 chr17 5669597 5669829 -83834724 - AluSg/x SINE Alu -1 309 79 1188 171 9 23 chr17 5669831 5670047 -83834506 - AluJo SINE Alu -41 271 59 2169 97 7 3 chr17 5670165 5670463 -83834090 + AluY SINE Alu 1 299 -12 1003 88 0 0 chr17 5670676 5670801 -83833752 + AluSq/x SINE Alu 1 125 -188 2268 109 3 0 chr17 5670805 5671108 -83833445 + AluSg SINE Alu 1 304 -6 715 281 55 44 chr17 5671110 5671675 -83832878 + L1M4 LINE L1 3422 3992 -2154 242 247 21 10 chr17 5671981 5672078 -83832475 + L1M4 LINE L1 4272 4369 -1777 1926 121 10 39 chr17 5673310 5673616 -83830937 - AluSq SINE Alu -16 297 1 780 143 0 0 chr17 5673802 5673914 -83830639 + FLAM_C SINE Alu 6 117 -26 26 0 0 0 chr17 5673921 5673947 -83830606 + AT_rich Low_complexity Low_complexity 1 26 0 29 0 0 0 chr17 5677946 5677975 -83826578 + AT_rich Low_complexity Low_complexity 1 29 0 635 251 15 41 chr17 5677976 5678171 -83826382 - LTR41 LTR ERVL -583 190 1 2462 107 8 8 chr17 5678415 5678770 -83825783 - THE1A LTR MaLR 0 355 1 12042 84 11 5 chr17 5678770 5680340 -83824213 - THE1A-int LTR MaLR 0 1580 1 2458 102 11 8 chr17 5680340 5680694 -83823859 - THE1A LTR MaLR 0 355 1 1162 239 15 23 chr17 5680797 5681060 -83823493 + MIR SINE MIR 2 262 0 845 138 23 0 chr17 5681135 5681265 -83823288 - FLAM_C SINE Alu 0 133 1 2529 61 0 3 chr17 5681996 5682293 -83822260 - AluY SINE Alu -15 296 1 2219 120 13 0 chr17 5682450 5682758 -83821795 + AluSx SINE Alu 1 312 0 1420 197 39 8 chr17 5682760 5683120 -83821433 + L1M4 LINE L1 4480 4850 -1296 2323 101 0 0 chr17 5683125 5683421 -83821132 - AluY SINE Alu -15 296 1 246 180 0 0 chr17 5683425 5683475 -83821078 + L1MA10 LINE L1 6285 6334 0 1756 88 0 0 chr17 5684792 5685009 -83819544 + AluSg/x SINE Alu 85 301 -11 192 313 127 45 chr17 5685130 5685264 -83819289 - L2 LINE L2 -218 3054 2910 293 265 102 48 chr17 5685607 5685773 -83818780 - HAL1 LINE L1 -8 2499 2325 1779 133 29 32 chr17 5685773 5686089 -83818464 - MER21A LTR ERV1 0 931 617 2218 120 0 3 chr17 5686090 5686389 -83818164 - AluSq SINE Alu -15 298 1 2254 118 0 0 chr17 5686389 5686685 -83817868 - AluSx SINE Alu -16 296 1 2158 105 22 0 chr17 5687113 5687426 -83817127 + AluSg SINE Alu 1 319 0 2365 74 0 10 chr17 5687427 5687725 -83816828 + AluY SINE Alu 1 295 -16 359 234 115 40 chr17 5687824 5687978 -83816575 - MIR SINE MIR -58 204 34 2255 110 0 23 chr17 5688014 5688323 -83816230 + AluSx SINE Alu 1 302 -10 354 248 248 18 chr17 5688661 5688774 -83815779 + MIR3 SINE MIR 49 187 -21 2393 99 0 0 chr17 5688899 5689201 -83815352 + AluSq SINE Alu 1 302 -11 2448 76 0 7 chr17 5689473 5689775 -83814778 + AluY SINE Alu 1 300 -11 2148 101 0 21 chr17 5689787 5690074 -83814479 + AluSq SINE Alu 2 282 -31 252 152 22 0 chr17 5690271 5690317 -83814236 - L2 LINE L2 -2 3270 3224 319 264 0 0 chr17 5690357 5690429 -83814124 + MIR SINE MIR 15 86 -176 2380 92 0 0 chr17 5690793 5691086 -83813467 - AluSx SINE Alu -16 296 4 2380 102 0 22 chr17 5691094 5691408 -83813145 - AluSg SINE Alu -3 307 1 813 133 0 113 chr17 5691415 5691565 -83812988 - FLAM_A SINE Alu 0 133 1 2121 190 74 88 chr17 5691754 5692220 -83812333 - MER77 LTR ERV1 0 605 134 2099 137 0 3 chr17 5692220 5692520 -83812033 - AluSx SINE Alu -13 299 1 2414 84 0 3 chr17 5692530 5692827 -83811726 - AluSg SINE Alu -14 296 1 2121 190 74 88 chr17 5692827 5692917 -83811636 - MER77 LTR ERV1 -480 125 46 735 140 61 0 chr17 5692950 5693064 -83811489 + FLAM_C SINE Alu 6 126 -17 2352 105 7 0 chr17 5693225 5693531 -83811022 + AluSx SINE Alu 1 308 -4 1928 160 0 0 chr17 5693539 5693833 -83810720 + AluJo SINE Alu 1 294 -18 5327 31 0 0 chr17 5693833 5694449 -83810104 + L1PA4 LINE L1 5536 6151 -4 264 30 0 0 chr17 5694449 5694482 -83810071 + (CA)n Simple_repeat Simple_repeat 2 34 0 1538 215 44 133 chr17 5694953 5695168 -83809385 - L1ME3A LINE L1 -5 6165 5933 2420 104 0 0 chr17 5695168 5695476 -83809077 - AluSg SINE Alu -1 309 2 1538 215 44 133 chr17 5695476 5695637 -83808916 - L1ME3A LINE L1 -237 5933 5864 1508 164 20 55 chr17 5695637 5695955 -83808598 - AluJo SINE Alu 0 308 1 1538 215 44 133 chr17 5695955 5696208 -83808345 - L1ME3A LINE L1 -306 5864 5590 2356 112 0 3 chr17 5696219 5696532 -83808021 - AluSx SINE Alu 0 312 1 2537 58 0 0 chr17 5697000 5697292 -83807261 - AluY SINE Alu -8 303 12 2392 88 0 0 chr17 5697292 5697587 -83806966 - AluY SINE Alu -16 295 1 844 209 90 101 chr17 5697597 5697975 -83806578 - MLT1A2 LTR MaLR 0 374 1 2092 145 0 3 chr17 5698002 5698298 -83806255 - AluSx SINE Alu -17 295 1 1687 162 75 0 chr17 5698326 5698604 -83805949 + AluJb SINE Alu 1 299 -13 600 298 70 83 chr17 5698760 5699133 -83805420 + L2 LINE L2 2946 3313 0 801 257 25 50 chr17 5699133 5699239 -83805314 - MIR SINE MIR 0 262 155 2531 73 0 0 chr17 5699239 5699542 -83805011 - AluY SINE Alu -8 303 1 801 257 25 50 chr17 5699542 5699676 -83804877 - MIR SINE MIR -107 155 28 2218 111 34 0 chr17 5699817 5700115 -83804438 - AluSx SINE Alu 0 312 5 1931 163 0 7 chr17 5700354 5700655 -83803898 - AluJo SINE Alu -13 299 1 204 201 152 28 chr17 5700704 5700822 -83803731 + MIR SINE MIR 11 159 -49 2037 74 4 0 chr17 5702499 5702771 -83801782 + AluSp SINE Alu 39 311 0 622 299 155 51 chr17 5702981 5703176 -83801377 + L2 LINE L2 2006 2179 -1093 2245 98 0 30 chr17 5703176 5703481 -83801072 - AluSx SINE Alu -16 296 1 622 299 155 51 chr17 5703481 5704089 -83800464 + L2 LINE L2 2179 2722 -550 2306 107 3 3 chr17 5704089 5704398 -83800155 + AluSg SINE Alu 1 309 -1 622 299 155 51 chr17 5704398 5704711 -83799842 + L2 LINE L2 2722 3266 -6 24 0 0 0 chr17 5704795 5704819 -83799734 + AT_rich Low_complexity Low_complexity 1 24 0 339 359 145 0 chr17 5704819 5704950 -83799603 + L2 LINE L2 3116 3265 -7 2251 102 13 3 chr17 5705206 5705509 -83799044 + AluSq SINE Alu 1 306 -7 2179 119 14 0 chr17 5705645 5705939 -83798614 + AluSx SINE Alu 1 298 -14 483 239 90 0 chr17 5706078 5706212 -83798341 - MLT1L LTR MaLR 0 615 470 402 209 181 60 chr17 5706239 5706343 -83798210 - MLT1L LTR MaLR -211 404 314 2237 92 46 0 chr17 5706343 5706627 -83797926 - AluSc SINE Alu -12 297 1 402 209 181 60 chr17 5706627 5706704 -83797849 - MLT1L LTR MaLR -301 314 201 1954 167 39 28 chr17 5706706 5706913 -83797640 - MLT1A1 LTR MaLR -1 364 150 1914 156 0 56 chr17 5706913 5707082 -83797471 - AluJo SINE Alu -9 303 159 2374 96 0 10 chr17 5707082 5707385 -83797168 - AluY SINE Alu -11 300 1 1914 156 0 56 chr17 5707385 5707536 -83797017 - AluJo SINE Alu -153 159 1 1954 167 39 28 chr17 5707536 5707688 -83796865 - MLT1A1 LTR MaLR -215 150 1 6782 195 65 42 chr17 5707688 5708845 -83795708 - MLT1A1-int LTR MaLR 0 1735 532 2207 126 3 0 chr17 5708845 5709154 -83795399 + AluSq SINE Alu 1 310 -3 6782 195 65 42 chr17 5709154 5709532 -83795021 - MLT1A1-int LTR MaLR -1203 532 164 423 115 16 0 chr17 5709632 5709693 -83794860 - AluS SINE Alu -255 63 2 2443 80 0 0 chr17 5709778 5710077 -83794476 + AluSg SINE Alu 1 299 -11 333 280 131 0 chr17 5710294 5710401 -83794152 + MIR3 SINE MIR 36 156 -52 227 283 17 0 chr17 5710683 5710743 -83793810 - L2 LINE L2 -273 3040 2980 184 282 91 36 chr17 5711170 5711280 -83793273 - L3 LINE CR1 -2 1575 1460 2215 121 3 10 chr17 5711466 5711780 -83792773 - AluSp SINE Alu 0 313 2 1045 224 92 7 chr17 5712105 5712386 -83792167 + MLT1D LTR MaLR 41 345 -160 1913 148 7 3 chr17 5712561 5712868 -83791685 - AluJo SINE Alu 0 308 1 446 238 61 37 chr17 5712934 5713098 -83791455 + MLT1H1 LTR MaLR 10 177 -413 725 96 0 0 chr17 5713101 5713195 -83791358 + AluSg1 SINE Alu 2 95 -214 776 215 37 19 chr17 5714393 5714607 -83789946 + LTR7 LTR ERV1 233 450 0 1553 94 5 0 chr17 5714607 5714810 -83789743 + AluSg1 SINE Alu 93 296 -16 711 261 92 38 chr17 5714813 5715181 -83789372 + MLT1H1 LTR MaLR 168 555 0 551 208 219 6 chr17 5715449 5715627 -83788926 + MLT1D LTR MaLR 290 505 0 2471 88 0 3 chr17 5715658 5715966 -83788587 - AluSx SINE Alu -5 307 1 3642 156 26 61 chr17 5716275 5716494 -83788059 + LTR62 LTR ERVK 1 226 -493 2475 103 0 0 chr17 5716494 5716804 -83787749 + AluSg SINE Alu 1 310 0 3642 156 26 61 chr17 5716804 5716871 -83787682 + LTR62 LTR ERVK 226 294 -425 2395 103 0 0 chr17 5716871 5717173 -83787380 + AluSp SINE Alu 1 302 -11 3642 156 26 61 chr17 5717173 5717628 -83786925 + LTR62 LTR ERVK 294 717 -2 741 170 7 21 chr17 5717837 5717978 -83786575 - AluY SINE Alu -22 289 151 260 150 0 0 chr17 5717978 5718018 -83786535 - Alu SINE Alu -268 40 1 248 188 12 47 chr17 5718020 5718105 -83786448 + L1MC4a LINE L1 5858 5939 -1869 2296 112 0 0 chr17 5718105 5718409 -83786144 + AluSq SINE Alu 1 304 -9 3992 185 43 21 chr17 5718465 5719134 -83785419 - L1MB7 LINE L1 0 6184 5531 2184 112 7 7 chr17 5719134 5719430 -83785123 - AluSq SINE Alu -17 296 1 3992 185 43 21 chr17 5719430 5719757 -83784796 - L1MB7 LINE L1 -653 5531 5212 2294 113 6 0 chr17 5719757 5720068 -83784485 - AluSp SINE Alu 0 313 1 3992 185 43 21 chr17 5720068 5720537 -83784016 - L1MB7 LINE L1 -972 5212 4683 346 125 0 0 chr17 5720543 5720591 -83783962 + Alu SINE Alu 1 48 -254 1326 114 11 0 chr17 5720697 5720872 -83783681 - AluSg SINE Alu -133 177 1 2049 122 30 7 chr17 5720935 5721230 -83783323 + AluSx SINE Alu 11 312 0 2159 105 7 13 chr17 5721232 5721537 -83783016 + AluSg SINE Alu 1 303 -7 286 330 0 0 chr17 5721544 5721635 -83782918 + L1ME LINE L1 5560 5650 -520 1784 173 77 0 chr17 5721641 5721954 -83782599 - MER1B DNA MER1_type 0 337 1 1671 167 10 20 chr17 5722020 5722320 -83782233 + AluJo SINE Alu 1 297 -15 1358 139 19 43 chr17 5722320 5722578 -83781975 - Charlie1b DNA MER1_type -213 310 59 230 312 19 8 chr17 5722603 5722707 -83781846 + L1PA8A LINE L1 5673 5772 -349 259 242 32 74 chr17 5722710 5722805 -83781748 + L2 LINE L2 3173 3263 -9 2362 98 0 13 chr17 5723029 5723344 -83781209 + AluSp SINE Alu 1 311 -2 2149 124 0 0 chr17 5723416 5723714 -83780839 + AluSx SINE Alu 3 300 -12 2197 119 3 3 chr17 5723715 5724025 -83780528 + AluSp SINE Alu 1 310 -3 3669 169 95 18 chr17 5724031 5724704 -83779849 + MER21B LTR ERV1 94 818 -45 2345 82 0 0 chr17 5724725 5725035 -83779518 + AluSc SINE Alu 1 310 0 1505 186 4 22 chr17 5725042 5725317 -83779236 + AluJo SINE Alu 1 270 -42 252 0 0 0 chr17 5725336 5725364 -83779189 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1285 165 81 18 chr17 5725392 5725665 -83778888 + AluJo SINE Alu 13 302 -10 27 49 0 0 chr17 5725736 5725777 -83778776 + AT_rich Low_complexity Low_complexity 1 41 0 260 192 0 0 chr17 5725984 5726036 -83778517 - L2 LINE L2 0 3313 3262 1170 148 6 0 chr17 5726187 5726363 -83778190 - AluSg/x SINE Alu -2 310 134 1951 127 3 39 chr17 5726363 5726671 -83777882 - AluSx SINE Alu -15 297 1 1816 64 4 0 chr17 5726707 5726940 -83777613 - L1PA6 LINE L1 -2 6152 5919 2123 106 3 10 chr17 5727059 5727362 -83777191 - AluSx SINE Alu -11 301 1 501 291 0 47 chr17 5727821 5727993 -83776560 - MIR SINE MIR -96 166 3 1804 80 0 0 chr17 5728111 5728337 -83776216 + AluSg/x SINE Alu 72 297 -15 2108 190 107 34 chr17 5729320 5729846 -83774707 - LTR6A LTR ERV1 0 564 1 2159 106 7 7 chr17 5730163 5730456 -83774097 - AluSx SINE Alu -19 293 1 1588 163 69 7 chr17 5730723 5731000 -83773553 + AluJo SINE Alu 1 294 -18 1726 164 44 0 chr17 5731002 5731295 -83773258 + AluJb SINE Alu 1 306 -6 747 169 0 0 chr17 5731296 5731414 -83773139 + FLAM_C SINE Alu 1 118 -15 24 0 0 0 chr17 5731460 5731484 -83773069 + AT_rich Low_complexity Low_complexity 1 24 0 2563 61 0 0 chr17 5731495 5731792 -83772761 + AluY SINE Alu 1 297 -14 823 138 23 0 chr17 5732522 5732652 -83771901 + FLAM_C SINE Alu 1 133 0 1055 249 4 8 chr17 5732751 5732992 -83771561 - MIR SINE MIR -21 241 2 2419 104 11 8 chr17 5733095 5733449 -83771104 + THE1A LTR MaLR 1 355 0 11897 84 11 5 chr17 5733449 5735019 -83769534 + THE1A-int LTR MaLR 1 1580 0 2441 107 8 8 chr17 5735019 5735374 -83769179 + THE1A LTR MaLR 1 355 0 676 246 15 41 chr17 5735618 5735813 -83768740 + LTR41 LTR ERVL 1 190 -583 29 0 0 0 chr17 5735814 5735843 -83768710 + AT_rich Low_complexity Low_complexity 1 29 0 1386 217 64 31 chr17 5737012 5737079 -83767474 - Charlie2 DNA MER1_type -510 2352 2289 2133 108 10 20 chr17 5737079 5737385 -83767168 + AluSg SINE Alu 1 303 -7 1386 217 64 31 chr17 5737385 5737800 -83766753 - Charlie2 DNA MER1_type -573 2289 1854 2048 115 3 17 chr17 5737828 5738115 -83766438 - AluSx SINE Alu -29 283 1 2037 133 0 10 chr17 5738489 5738782 -83765771 + AluSx SINE Alu 1 290 -22 1703 104 0 0 chr17 5739896 5740126 -83764427 - AluSg/x SINE Alu -1 309 80 2560 57 0 0 chr17 5740185 5740482 -83764071 - AluY SINE Alu -14 297 1 436 269 133 50 chr17 5741024 5741234 -83763319 + HAL1 LINE L1 1156 1347 -1160 2287 111 0 7 chr17 5741234 5741540 -83763013 + AluSx SINE Alu 1 304 -8 436 269 133 50 chr17 5741540 5741787 -83762766 + HAL1 LINE L1 1347 1651 -856 2147 116 7 3 chr17 5741835 5742145 -83762408 + AluSx SINE Alu 1 311 -1 2246 125 0 0 chr17 5742217 5742522 -83762031 + AluSx SINE Alu 1 305 -7 1005 169 0 11 chr17 5742565 5742743 -83761810 - AluSg/x SINE Alu -9 301 126 1990 204 75 29 chr17 5742743 5743292 -83761261 + L1M4 LINE L1 3613 4186 -1960 204 40 0 0 chr17 5743292 5743317 -83761236 + (TA)n Simple_repeat Simple_repeat 2 26 0 3640 208 55 7 chr17 5743322 5744030 -83760523 + MER21B LTR ERV1 36 777 -86 235 132 0 0 chr17 5744031 5744069 -83760484 + L1MB8 LINE L1 6141 6178 0 1000 260 46 26 chr17 5744203 5744591 -83759962 + L1M4 LINE L1 3490 3862 -2284 682 151 0 0 chr17 5744591 5744710 -83759843 + L1MA6 LINE L1 6177 6295 -5 2267 101 10 3 chr17 5744715 5745023 -83759530 + AluSg SINE Alu 1 310 0 2090 106 24 10 chr17 5745036 5745328 -83759225 - AluSx SINE Alu -16 296 1 4686 207 50 45 chr17 5745328 5746694 -83757859 + L1MA4 LINE L1 2254 3612 -3953 1795 163 10 10 chr17 5746694 5746826 -83757727 + AluJb SINE Alu 1 132 -180 2012 149 0 3 chr17 5746826 5747127 -83757426 + AluJo SINE Alu 1 300 -12 1795 163 10 10 chr17 5747127 5747283 -83757270 + AluJb SINE Alu 131 289 -23 4686 207 50 45 chr17 5747283 5747445 -83757108 + L1MA4 LINE L1 3612 3772 -3793 1370 164 56 72 chr17 5747445 5747583 -83756970 + AluJo SINE Alu 1 140 -172 2238 99 0 3 chr17 5747583 5747875 -83756678 + AluSq SINE Alu 1 291 -22 1370 164 56 72 chr17 5747875 5748041 -83756512 + AluJo SINE Alu 140 300 -12 4686 207 50 45 chr17 5748041 5748278 -83756275 + L1MA4 LINE L1 3772 4037 -3528 6431 154 59 126 chr17 5748283 5748459 -83756094 + L1MA4 LINE L1 5141 5327 -2396 2118 138 3 3 chr17 5748459 5748771 -83755782 + AluSx SINE Alu 1 312 0 6431 154 59 126 chr17 5748771 5750678 -83753875 + L1MA4 LINE L1 5327 7085 -638 2012 104 3 83 chr17 5750678 5751004 -83753549 + AluSq SINE Alu 2 301 -12 1775 179 45 73 chr17 5751004 5751495 -83753058 + L1MA4 LINE L1 7242 7718 -1 464 206 37 0 chr17 5751490 5751597 -83752956 + L1MC1 LINE L1 5282 5392 -941 * 4447 179 33 7 chr17 5751604 5752460 -83752093 + L1MC1 LINE L1 5456 6333 0 1345 170 33 8 chr17 5752471 5752712 -83751841 - Tigger3(Golem) DNA MER2_type 0 3029 2783 2425 95 0 13 chr17 5752712 5753028 -83751525 + AluSx SINE Alu 1 312 0 585 252 22 0 chr17 5753060 5753195 -83751358 - Tigger3(Golem) DNA MER2_type -2890 139 2 2034 159 0 3 chr17 5754009 5754318 -83750235 + AluJb SINE Alu 1 308 -4 2120 75 65 0 chr17 5754318 5754596 -83749957 + AluSg SINE Alu 1 297 -13 353 242 80 93 chr17 5754606 5754895 -83749658 + L1MC5 LINE L1 7530 7814 -147 2328 78 3 3 chr17 5754895 5755189 -83749364 + AluSq SINE Alu 1 294 -19 353 242 80 93 chr17 5755189 5755287 -83749266 + L1MC5 LINE L1 7814 7912 -49 329 123 15 0 chr17 5755427 5755492 -83749061 + (TA)n Simple_repeat Simple_repeat 1 66 0 284 312 42 8 chr17 5756178 5756297 -83748256 - MIR SINE MIR -75 133 8 1862 153 3 3 chr17 5756387 5756669 -83747884 + AluJo SINE Alu 1 282 -30 243 0 0 0 chr17 5756674 5756701 -83747852 + (T)n Simple_repeat Simple_repeat 1 27 0 360 266 152 15 chr17 5756701 5757018 -83747535 + L1M3 LINE L1 5195 5545 -748 458 250 107 18 chr17 5757205 5757373 -83747180 - MIR SINE MIR -10 252 70 21 0 0 0 chr17 5757501 5757522 -83747031 + AT_rich Low_complexity Low_complexity 1 21 0 2284 86 3 35 chr17 5758243 5758556 -83745997 - AluSx SINE Alu -9 303 1 2367 90 0 0 chr17 5758809 5759108 -83745445 - AluY SINE Alu -12 299 1 461 299 41 28 chr17 5759251 5759473 -83745080 - MLT1J LTR MaLR -12 601 305 274 285 103 23 chr17 5759509 5759690 -83744863 - MLT1J LTR MaLR -287 159 2 1328 151 56 119 chr17 5759697 5759878 -83744675 - AluSx SINE Alu -13 299 145 2399 90 0 0 chr17 5759878 5760177 -83744376 - AluSx SINE Alu -12 300 2 1328 151 56 119 chr17 5760177 5760314 -83744239 - AluSx SINE Alu -167 145 1 388 299 162 5 chr17 5760480 5760684 -83743869 + MIR SINE MIR 6 241 -21 388 240 38 117 chr17 5761144 5761541 -83743012 + L2 LINE L2 2979 3310 -3 1815 156 16 13 chr17 5761910 5762267 -83742286 - L1MC3 LINE L1 -12 7983 7450 22 0 0 0 chr17 5763027 5763049 -83741504 + AT_rich Low_complexity Low_complexity 1 22 0 2451 57 0 27 chr17 5763050 5763350 -83741203 + AluY SINE Alu 1 292 -19 2191 92 7 26 chr17 5763927 5764231 -83740322 + AluSp SINE Alu 2 299 -14 1534 172 54 37 chr17 5764521 5764817 -83739736 + AluJo SINE Alu 1 301 -11 872 248 0 0 chr17 5765001 5765162 -83739391 + AluJb SINE Alu 129 289 -23 2280 95 0 16 chr17 5765164 5765468 -83739085 + AluSx SINE Alu 3 301 -11 376 270 110 19 chr17 5765471 5765789 -83738764 + L1M4 LINE L1 2270 2616 -3530 463 224 20 61 chr17 5765884 5766031 -83738522 + MIR SINE MIR 64 204 -58 225 279 15 0 chr17 5766041 5766109 -83738444 + MIR SINE MIR 167 235 -27 2497 83 0 3 chr17 5766311 5766625 -83737928 + AluSq SINE Alu 1 313 0 354 265 103 7 chr17 5766626 5766762 -83737791 + L1M4 LINE L1 3123 3271 -2875 751 192 48 12 chr17 5766765 5766932 -83737621 + AluJo SINE Alu 121 293 -19 294 277 188 66 chr17 5766932 5768002 -83736551 + L1M4 LINE L1 3306 4595 -1551 1542 132 123 8 chr17 5768002 5768253 -83736300 + AluSg1 SINE Alu 1 280 -29 294 277 188 66 chr17 5768253 5768615 -83735938 + L1M4 LINE L1 4595 4912 -1234 2056 112 32 0 chr17 5768624 5768909 -83735644 + AluSx SINE Alu 1 294 -18 483 154 13 0 chr17 5768919 5768997 -83735556 + AluJ/FLAM SINE Alu 2 80 -232 21 0 0 0 chr17 5769110 5769131 -83735422 + AT_rich Low_complexity Low_complexity 1 21 0 1627 168 14 3 chr17 5769168 5769454 -83735099 + AluSx SINE Alu 14 302 -10 1950 134 0 20 chr17 5769521 5769827 -83734726 - AluJo SINE Alu -12 300 1 2508 70 0 3 chr17 5769839 5770139 -83734414 - AluY SINE Alu -12 299 1 699 227 57 81 chr17 5770170 5770231 -83734322 - L1M4 LINE L1 -1455 4691 4630 1939 102 12 0 chr17 5770231 5770487 -83734066 + AluSp SINE Alu 37 295 -18 699 227 57 81 chr17 5770487 5770650 -83733903 - L1M4 LINE L1 -1516 4630 4465 2484 86 0 0 chr17 5770650 5770954 -83733599 - AluSc SINE Alu -4 305 2 2561 85 0 0 chr17 5770956 5771263 -83733290 - AluSq SINE Alu -6 307 1 699 227 57 81 chr17 5771263 5771369 -83733184 - L1M4 LINE L1 -1682 4464 4365 2524 62 0 10 chr17 5771372 5771676 -83732877 - AluY SINE Alu -10 301 1 1345 181 0 0 chr17 5771685 5771890 -83732663 - AluJb SINE Alu -23 289 85 2269 92 0 7 chr17 5771903 5772209 -83732344 - AluSx SINE Alu -8 304 1 2195 232 6 40 chr17 5772209 5772739 -83731814 - L1M4 LINE L1 -5697 845 334 476 239 26 0 chr17 5772743 5772860 -83731693 + L1M4 LINE L1 581 700 -5842 1021 133 0 0 chr17 5772885 5773035 -83731518 - AluSg/x SINE Alu -1 311 162 507 17 0 0 chr17 5773035 5773095 -83731458 - AluSp/q SINE Alu -16 297 238 1830 106 10 51 chr17 5773109 5773401 -83731152 - AluSx SINE Alu -32 280 1 2003 128 14 0 chr17 5773412 5773693 -83730860 - AluSx SINE Alu -7 305 21 837 178 51 0 chr17 5773777 5773934 -83730619 - MER20 DNA MER1_type -1 218 54 414 140 0 0 chr17 5773934 5773991 -83730562 + AluS SINE Alu 2 58 -260 180 0 0 0 chr17 5774007 5774027 -83730526 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2521 65 0 7 chr17 5774028 5774335 -83730218 + AluY SINE Alu 1 305 -6 395 250 48 16 chr17 5774407 5774531 -83730022 + L1MC4 LINE L1 7914 8041 -1 1247 278 224 49 chr17 5774563 5775052 -83729501 - L2 LINE L2 -1091 2223 1821 1646 164 114 0 chr17 5775052 5775332 -83729221 - AluJo SINE Alu 0 312 1 1247 278 224 49 chr17 5775332 5775389 -83729164 - L2 LINE L2 -1493 1821 1775 2121 118 7 0 chr17 5775389 5775678 -83728875 + AluSg SINE Alu 1 291 -19 1247 278 224 49 chr17 5775678 5776069 -83728484 - L2 LINE L2 -1539 1775 1121 1976 100 0 0 chr17 5776133 5776384 -83728169 - AluSg SINE Alu -6 304 54 643 295 104 39 chr17 5776458 5776814 -83727739 + LTR67 LTR ERVL 101 479 -78 2659 52 0 0 chr17 5776971 5777277 -83727276 - AluY SINE Alu -5 306 1 1694 181 56 3 chr17 5777521 5777809 -83726744 - AluJb SINE Alu -9 303 1 2290 92 27 0 chr17 5778673 5778966 -83725587 - AluSx SINE Alu -11 301 1 197 302 32 0 chr17 5778972 5779035 -83725518 - L2 LINE L2 -536 2778 2714 988 224 75 67 chr17 5779336 5779390 -83725163 + Charlie7 DNA MER1_type 284 336 -2276 2456 75 0 0 chr17 5779390 5779685 -83724868 - AluY SINE Alu -16 295 1 2259 85 0 7 chr17 5779688 5780004 -83724549 - AluSg SINE Alu 0 314 1 988 224 75 67 chr17 5780004 5780346 -83724207 + Charlie7 DNA MER1_type 337 688 -1924 2493 93 3 0 chr17 5780628 5780939 -83723614 - AluSp SINE Alu -1 312 1 2138 119 6 72 chr17 5781547 5781908 -83722645 - MER1B DNA MER1_type 0 337 1 2148 118 7 3 chr17 5784493 5784798 -83719755 - AluSc SINE Alu -1 308 3 2331 94 0 29 chr17 5784858 5785166 -83719387 - AluSx SINE Alu -13 299 1 1564 170 48 15 chr17 5785673 5785978 -83718575 - AluJo SINE Alu 0 319 6 207 276 51 71 chr17 5786929 5787027 -83717526 - MIR SINE MIR -5 257 162 460 165 52 0 chr17 5787063 5787160 -83717393 - Charlie1 DNA MER1_type -30 2731 2630 510 230 70 75 chr17 5787170 5787308 -83717245 - Charlie1 DNA MER1_type -2544 217 79 2149 132 0 19 chr17 5787308 5787626 -83716927 + AluJb SINE Alu 1 312 0 510 230 70 75 chr17 5787626 5787674 -83716879 - Charlie1 DNA MER1_type -2682 79 32 407 306 148 27 chr17 5787715 5787898 -83716655 - MIR SINE MIR -24 238 34 1784 154 44 17 chr17 5789246 5789539 -83715014 + AluJb SINE Alu 1 301 -11 186 244 89 67 chr17 5790211 5790301 -83714252 - L2 LINE L2 -2787 527 436 1384 152 0 0 chr17 5791429 5791667 -83712886 - AluJb SINE Alu 0 322 85 627 285 92 39 chr17 5791747 5792234 -83712319 - L1ME4a LINE L1 -1 6120 5608 2163 156 99 17 chr17 5793423 5793845 -83710708 + MSTB2 LTR MaLR 1 457 0 21 36 0 0 chr17 5794212 5794240 -83710313 + AT_rich Low_complexity Low_complexity 1 28 0 1512 180 11 18 chr17 5794602 5794905 -83709648 + AluSx SINE Alu 1 301 0 2158 115 14 0 chr17 5795036 5795322 -83709231 - AluSq SINE Alu -23 290 1 756 82 0 0 chr17 5796023 5796121 -83708432 - L1PA5 LINE L1 -3 6151 6054 2934 31 0 0 chr17 5796121 5796474 -83708079 + L1P2 LINE L1 5449 5801 -354 359 171 11 34 chr17 5796572 5796660 -83707893 + L1MA9 LINE L1 6222 6307 -5 1360 276 153 35 chr17 5796980 5797065 -83707488 + L2 LINE L2 316 390 -2924 2050 161 0 3 chr17 5797065 5797370 -83707183 - AluJb SINE Alu -4 308 5 1360 276 153 35 chr17 5797370 5797962 -83706591 + L2 LINE L2 390 1073 -2241 598 228 233 5 chr17 5798175 5798381 -83706172 + L2 LINE L2 1823 2075 -1239 405 0 0 0 chr17 5798382 5798427 -83706126 + (TC)n Simple_repeat Simple_repeat 2 46 0 26 50 0 0 chr17 5798439 5798479 -83706074 + GC_rich Low_complexity Low_complexity 1 40 0 262 239 31 25 chr17 5798618 5798777 -83705776 + (CCGCG)n Simple_repeat Simple_repeat 1 160 0 1167 281 93 21 chr17 5798938 5799508 -83705045 - HsTC2a DNA Tc2 0 744 134 204 40 0 0 chr17 5799724 5799749 -83704804 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 769 192 13 0 chr17 5800242 5800398 -83704155 + MLT1B LTR MaLR 192 349 -41 236 162 0 0 chr17 5800441 5800478 -83704075 + MLT1B LTR MaLR 354 390 0 2206 77 6 45 chr17 5800537 5800849 -83703704 - AluSg SINE Alu -9 301 2 573 287 80 23 chr17 5800858 5801158 -83703395 + L1MC/D LINE L1 5479 5795 -2013 2041 129 0 17 chr17 5801170 5801465 -83703088 + AluJb SINE Alu 11 300 -12 2851 6 0 22 chr17 5801465 5801782 -83702771 + AluY SINE Alu 1 310 -1 2350 105 0 0 chr17 5801782 5802076 -83702477 + AluSp SINE Alu 1 294 -19 1267 135 0 0 chr17 5802076 5802254 -83702299 + AluSc SINE Alu 132 309 0 1223 145 0 0 chr17 5802754 5802926 -83701627 - AluJb SINE Alu -140 172 1 2342 73 7 17 chr17 5803558 5803858 -83700695 - AluY SINE Alu -14 297 1 2477 80 0 3 chr17 5804252 5804551 -83700002 + AluSc SINE Alu 1 298 -11 1725 182 30 0 chr17 5804632 5804929 -83699624 + AluJo SINE Alu 1 306 -6 2354 103 3 0 chr17 5805530 5805831 -83698722 - AluSp SINE Alu -11 302 1 262 300 56 0 chr17 5805866 5805956 -83698597 - MIR SINE MIR -70 192 98 189 301 126 75 chr17 5805986 5806225 -83698328 - L2 LINE L2 -18 3254 3004 1530 152 97 15 chr17 5806374 5806509 -83698044 + AluSq SINE Alu 1 124 -189 1425 150 49 95 chr17 5806509 5806835 -83697718 + AluSq SINE Alu 1 311 -2 1530 152 97 15 chr17 5806835 5806968 -83697585 + AluSq SINE Alu 124 291 -22 1976 144 6 13 chr17 5806978 5807291 -83697262 - AluSx SINE Alu -1 311 1 2155 91 63 0 chr17 5807568 5807854 -83696699 - AluSx SINE Alu -7 305 2 452 256 131 64 chr17 5808813 5808940 -83695613 - L2 LINE L2 -58 3255 3138 1826 139 49 7 chr17 5808940 5809227 -83695326 - AluJb SINE Alu -13 299 1 452 256 131 64 chr17 5809227 5809412 -83695141 - L2 LINE L2 -175 3138 2922 2076 136 7 3 chr17 5809529 5809831 -83694722 - AluJb SINE Alu -9 303 1 2033 143 17 0 chr17 5809948 5810241 -83694312 + AluSx SINE Alu 7 304 -8 2285 45 7 41 chr17 5810419 5810746 -83693807 + AluY SINE Alu 1 317 0 180 77 0 0 chr17 5811780 5811806 -83692747 + (CAG)n Simple_repeat Simple_repeat 3 28 0 605 265 92 5 chr17 5812024 5812209 -83692344 - MIR SINE MIR -3 259 59 2248 78 0 19 chr17 5812511 5812818 -83691735 - AluSc SINE Alu -8 301 1 2096 86 52 0 chr17 5812998 5813299 -83691254 - AluSx SINE Alu 0 315 1 268 347 116 0 chr17 5813366 5813487 -83691066 - L2 LINE L2 -1 3271 3137 257 237 340 0 chr17 5813495 5813592 -83690961 + L2 LINE L2 3141 3270 -2 1135 93 0 0 chr17 5813743 5813882 -83690671 + AluSg SINE Alu 1 139 -171 364 75 0 0 chr17 5813887 5813940 -83690613 + Alu SINE Alu 248 300 0 409 260 133 29 chr17 5814018 5814191 -83690362 - MIR SINE MIR -10 252 62 963 258 76 63 chr17 5816249 5816531 -83688022 + L2 LINE L2 2211 2503 -811 2467 93 0 0 chr17 5816531 5816843 -83687710 - AluSp SINE Alu -1 312 1 963 258 76 63 chr17 5816843 5817018 -83687535 + L2 LINE L2 2503 2674 -640 2339 107 0 13 chr17 5817059 5817376 -83687177 - AluSq SINE Alu 0 313 1 338 203 109 0 chr17 5817385 5817513 -83687040 - L1M4 LINE L1 -2191 3955 3814 1431 101 11 0 chr17 5817513 5817702 -83686851 - AluSg/x SINE Alu -13 299 109 344 23 0 0 chr17 5817702 5817745 -83686808 + AluSc SINE Alu 92 134 -165 740 231 64 0 chr17 5817745 5817901 -83686652 + AluJo/FRAM SINE Alu 137 302 0 2018 184 23 76 chr17 5817923 5818259 -83686294 + L1M4 LINE L1 3951 4246 -1900 1734 107 133 0 chr17 5818259 5818522 -83686031 + AluSg SINE Alu 1 298 -2 2018 184 23 76 chr17 5818522 5818754 -83685799 + L1M4 LINE L1 4246 4489 -1657 2230 110 10 0 chr17 5818754 5819054 -83685499 + AluSg SINE Alu 1 303 -7 269 23 0 70 chr17 5819068 5819111 -83685442 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 1580 166 25 31 chr17 5819112 5819267 -83685286 + L1M4 LINE L1 4741 4895 -1251 2413 62 10 20 chr17 5819267 5819573 -83684980 - AluY SINE Alu -7 304 2 1580 166 25 31 chr17 5819573 5819859 -83684694 + L1M4 LINE L1 4895 5308 -838 1870 98 0 8 chr17 5819860 5820105 -83684448 + AluSx SINE Alu 1 243 -69 2915 12 0 6 chr17 5820124 5820444 -83684109 + AluYb8 SINE Alu 1 318 0 793 151 22 29 chr17 5820449 5820588 -83683965 + FRAM SINE Alu 1 138 -38 1833 175 13 34 chr17 5820615 5821038 -83683515 + L1M4 LINE L1 5254 5667 -507 191 0 0 62 chr17 5821138 5821170 -83683383 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 670 71 24 0 chr17 5821170 5821255 -83683298 - AluSg/x SINE Alu -31 278 192 1907 62 0 4 chr17 5821174 5821415 -83683138 - AluSg SINE Alu -37 273 34 2244 93 0 3 chr17 5822508 5822809 -83681744 + AluSx SINE Alu 1 300 -12 1343 187 37 23 chr17 5824707 5824879 -83679674 - AluJo SINE Alu -8 304 125 2068 138 0 0 chr17 5824879 5825191 -83679362 - AluSx SINE Alu 0 312 1 1343 187 37 23 chr17 5825191 5825318 -83679235 - AluJo SINE Alu -187 125 1 888 187 22 39 chr17 5825319 5825331 -83679222 - L1MC1 LINE L1 0 6333 6322 1946 103 4 0 chr17 5825331 5825594 -83678959 - AluSp SINE Alu -12 301 38 2223 94 0 7 chr17 5825594 5825893 -83678660 - AluSx SINE Alu -15 297 1 888 187 22 39 chr17 5825893 5826061 -83678492 - L1MC1 LINE L1 -9 6324 6155 691 279 67 41 chr17 5826061 5826376 -83678177 + L2 LINE L2 2974 3296 -17 818 202 5 58 chr17 5827102 5827212 -83677341 + MER45A DNA AcHobo 1 98 -1483 2209 82 10 0 chr17 5827212 5827505 -83677048 - AluY SINE Alu -15 296 1 818 202 5 58 chr17 5827505 5827582 -83676971 + MER45A DNA AcHobo 98 178 0 413 245 9 107 chr17 5828323 5828400 -83676153 - MIR SINE MIR -17 245 162 2118 102 3 7 chr17 5828400 5828695 -83675858 - AluSx SINE Alu -18 294 1 413 245 9 107 chr17 5828695 5828851 -83675702 - MIR SINE MIR -100 162 34 2451 65 0 7 chr17 5828893 5829202 -83675351 - AluY SINE Alu -4 307 1 1969 135 0 0 chr17 5829202 5829498 -83675055 - AluSx SINE Alu -16 296 1 2414 77 0 0 chr17 5829669 5829980 -83674573 - AluY SINE Alu 0 311 1 1926 97 56 3 chr17 5830072 5830360 -83674193 - AluSc SINE Alu -6 303 1 292 342 13 13 chr17 5830366 5830383 -83674170 - L1MA10 LINE L1 0 6334 6318 913 212 8 54 chr17 5830383 5830624 -83673929 - L1ME2 LINE L1 -9 6155 5926 2131 70 35 3 chr17 5830625 5830910 -83673643 + AluSp SINE Alu 1 294 -19 1307 117 187 44 chr17 5830919 5831146 -83673407 + AluJb SINE Alu 1 275 -37 2399 60 0 7 chr17 5831146 5831448 -83673105 + AluY SINE Alu 1 300 -11 1307 117 187 44 chr17 5831448 5831493 -83673060 + AluJb SINE Alu 275 312 0 1325 223 72 5 chr17 5831495 5831913 -83672640 + L1ME2 LINE L1 5326 5771 -393 365 314 116 0 chr17 5831965 5832086 -83672467 + L2 LINE L2 3137 3271 -1 25 75 0 0 chr17 5832251 5832304 -83672249 + GC_rich Low_complexity Low_complexity 1 53 0 21 57 0 0 chr17 5832486 5832521 -83672032 + GC_rich Low_complexity Low_complexity 1 35 0 36 77 0 0 chr17 5832551 5832629 -83671924 + GC_rich Low_complexity Low_complexity 1 78 0 23 0 0 0 chr17 5833015 5833038 -83671515 + GC_rich Low_complexity Low_complexity 1 23 0 1690 157 48 0 chr17 5834176 5834470 -83670083 - AluJo SINE Alu -4 308 1 2230 99 0 0 chr17 5835839 5836142 -83668411 + AluSq SINE Alu 1 303 -10 2100 62 87 3 chr17 5836765 5837054 -83667499 - AluSq SINE Alu 0 313 1 1376 170 33 33 chr17 5837291 5837591 -83666962 - AluJb SINE Alu -12 300 1 1185 111 0 0 chr17 5837598 5837760 -83666793 - AluSq SINE Alu -18 295 134 2160 120 0 0 chr17 5837760 5838069 -83666484 - AluSc SINE Alu 0 309 1 731 256 0 55 chr17 5838069 5838268 -83666285 + L1ME2 LINE L1 5925 6112 -52 2064 128 0 0 chr17 5838461 5838473 -83666080 - AluSx SINE Alu -15 297 286 195 69 0 0 chr17 5838473 5838502 -83666051 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 2064 128 0 0 chr17 5838502 5838786 -83665767 - AluSx SINE Alu -25 287 1 387 267 125 114 chr17 5838895 5839066 -83665487 - L1ME2 LINE L1 -368 5753 5585 2019 109 4 0 chr17 5839066 5839341 -83665212 + AluSx SINE Alu 13 288 -24 387 267 125 114 chr17 5839341 5839665 -83664888 - L1ME2 LINE L1 -536 5585 5251 344 268 39 4 chr17 5840540 5840776 -83663777 + (TGGA)n Simple_repeat Simple_repeat 1 244 0 2166 104 0 3 chr17 5841576 5841875 -83662678 + AluSx SINE Alu 1 298 -14 2178 101 0 0 chr17 5842857 5843153 -83661400 + AluY SINE Alu 1 296 -15 2226 95 0 0 chr17 5843153 5843449 -83661104 + AluY SINE Alu 1 296 -15 1264 96 6 6 chr17 5845192 5845369 -83659184 + AluSq SINE Alu 1 177 -136 309 141 0 0 chr17 5845406 5845428 -83659125 + (A)n Simple_repeat Simple_repeat 1 22 -42 2268 75 10 0 chr17 5845428 5845720 -83658833 - AluSp SINE Alu -18 295 1 309 141 0 0 chr17 5845720 5845732 -83658821 + (A)n Simple_repeat Simple_repeat 22 33 -31 1995 101 40 0 chr17 5845732 5846033 -83658520 - AluSq SINE Alu 0 313 1 309 141 0 0 chr17 5846033 5846048 -83658505 + (A)n Simple_repeat Simple_repeat 33 47 -17 2412 49 7 3 chr17 5846048 5846352 -83658201 - AluY SINE Alu -6 305 1 309 141 0 0 chr17 5846352 5846364 -83658189 + (A)n Simple_repeat Simple_repeat 46 64 0 2425 62 7 0 chr17 5846372 5846678 -83657875 - AluY SINE Alu -3 308 1 29 0 0 0 chr17 5846748 5846777 -83657776 + AT_rich Low_complexity Low_complexity 1 29 0 1924 154 3 3 chr17 5846859 5847171 -83657382 - AluJb SINE Alu 0 312 1 1697 103 96 21 chr17 5847537 5847818 -83656735 + AluSq SINE Alu 1 302 -11 1236 111 0 0 chr17 5847819 5847990 -83656563 + AluSq SINE Alu 134 304 -9 382 305 59 32 chr17 5849257 5849444 -83655109 + MIR SINE MIR 13 204 -58 306 277 107 9 chr17 5849419 5849531 -83655022 - L2 LINE L2 0 3313 3191 * 945 148 17 126 chr17 5849536 5849593 -83654960 - MER3 DNA MER1_type -3 206 144 2232 96 3 19 chr17 5849593 5849768 -83654785 - AluSx SINE Alu -3 309 140 1911 96 74 0 chr17 5849768 5850039 -83654514 - AluSg SINE Alu -17 293 3 2232 96 3 19 chr17 5850039 5850177 -83654376 - AluSx SINE Alu -172 140 1 945 148 17 126 chr17 5850177 5850224 -83654329 - MER3 DNA MER1_type -65 144 93 2226 92 3 13 chr17 5850224 5850528 -83654025 + AluSx SINE Alu 1 301 -11 945 148 17 126 chr17 5850528 5850652 -83653901 - MER3 DNA MER1_type -116 93 2 1774 162 11 0 chr17 5850797 5851075 -83653478 - AluJo SINE Alu -31 281 1 2256 112 0 6 chr17 5851084 5851398 -83653155 - AluSx SINE Alu 0 312 1 679 153 90 0 chr17 5851431 5851542 -83653011 + FLAM_A SINE Alu 1 121 -12 948 174 31 0 chr17 5851608 5851769 -83652784 - AluJo/FRAM SINE Alu 0 302 137 1828 148 0 16 chr17 5851769 5852074 -83652479 - AluSg SINE Alu -10 300 1 2405 65 10 3 chr17 5852082 5852391 -83652162 - AluSp SINE Alu 0 313 3 2223 100 7 0 chr17 5852423 5852732 -83651821 + AluY SINE Alu 1 311 0 2195 108 0 0 chr17 5853188 5853493 -83651060 - AluSg SINE Alu -5 305 1 417 181 252 0 chr17 5853629 5853756 -83650797 - MIR SINE MIR -13 249 91 2207 106 0 0 chr17 5853852 5854153 -83650400 - AluSx SINE Alu -11 301 1 200 371 89 40 chr17 5854237 5854585 -83649968 - L2 LINE L2 -72 3200 2836 850 219 0 28 chr17 5854591 5854769 -83649784 + FRAM SINE Alu 2 174 -2 2310 102 0 3 chr17 5854822 5855135 -83649418 - AluSx SINE Alu 0 312 1 2140 98 10 0 chr17 5855142 5855437 -83649116 - AluSp SINE Alu -15 298 1 638 143 151 0 chr17 5855437 5855556 -83648997 - FLAM_C SINE Alu -5 138 2 2477 43 0 10 chr17 5855559 5855863 -83648690 - AluY SINE Alu -10 301 1 2277 82 0 7 chr17 5855863 5856167 -83648386 - AluSx SINE Alu -9 303 1 278 149 0 0 chr17 5856170 5856217 -83648336 - AluSq/x SINE Alu -169 133 87 2071 106 0 3 chr17 5856218 5856502 -83648051 + AluSq SINE Alu 1 283 -30 258 56 0 0 chr17 5856594 5856630 -83647923 + (A)n Simple_repeat Simple_repeat 1 36 0 300 111 0 0 chr17 5856633 5856678 -83647875 - AluSq/x SINE Alu -198 104 60 1650 166 0 11 chr17 5856678 5856956 -83647597 + AluJb SINE Alu 22 296 -16 2511 61 0 0 chr17 5856960 5857271 -83647282 + AluY SINE Alu 1 311 0 435 276 41 8 chr17 5857509 5857632 -83646921 - MIR3 SINE MIR -17 191 65 262 226 21 75 chr17 5858218 5858311 -83646242 + GA-rich Low_complexity Low_complexity 3 90 0 1972 111 7 0 chr17 5860520 5860823 -83643730 + AluSx SINE Alu 1 305 0 355 298 118 0 chr17 5861691 5861852 -83642701 + MIR SINE MIR 57 236 -26 661 277 43 77 chr17 5861888 5862069 -83642484 + L2 LINE L2 3021 3190 -123 2038 108 0 29 chr17 5862069 5862375 -83642178 + AluSx SINE Alu 1 297 -15 661 277 43 77 chr17 5862375 5862493 -83642060 + L2 LINE L2 3190 3310 -3 2425 61 0 0 chr17 5864119 5864416 -83640137 - AluY SINE Alu -14 297 1 414 0 0 0 chr17 5865113 5865159 -83639394 + (TG)n Simple_repeat Simple_repeat 1 46 0 316 95 0 0 chr17 5865228 5865270 -83639283 + MER4E LTR ERV1 651 692 -74 246 316 76 76 chr17 5867035 5867115 -83637438 + MER20B DNA MER1_type 4 83 -700 2437 34 3 10 chr17 5867115 5867411 -83637142 + AluY SINE Alu 3 296 -15 246 316 76 76 chr17 5867411 5867501 -83637052 + MER20B DNA MER1_type 82 174 -609 2323 93 0 3 chr17 5868368 5868681 -83635872 + AluSx SINE Alu 1 312 0 668 224 105 53 chr17 5868809 5869037 -83635516 - MIR SINE MIR 0 262 23 2291 98 7 0 chr17 5869168 5869474 -83635079 - AluSx SINE Alu -4 308 1 1219 163 26 13 chr17 5870015 5870242 -83634311 - L1MB3 LINE L1 -1 6182 5953 2042 102 3 24 chr17 5870812 5871107 -83633446 - AluSx SINE Alu -15 297 9 827 204 7 0 chr17 5871855 5872007 -83632546 - FRAM SINE Alu -23 153 1 324 0 0 0 chr17 5872404 5872440 -83632113 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 819 152 65 0 chr17 5872440 5872578 -83631975 - AluSq SINE Alu -32 281 135 715 187 16 0 chr17 5873073 5873196 -83631357 + FLAM_C SINE Alu 1 125 -18 180 200 0 0 chr17 5873208 5873248 -83631305 + GA-rich Low_complexity Low_complexity 1 40 0 354 206 109 11 chr17 5873443 5873535 -83631018 + MIR SINE MIR 24 124 -138 2422 52 0 0 chr17 5873546 5873833 -83630720 - AluY SINE Alu -24 287 1 935 96 0 22 chr17 5873836 5873972 -83630581 - AluSq SINE Alu -180 133 1 418 198 62 0 chr17 5873973 5874069 -83630484 + MIR SINE MIR 113 214 -48 182 219 178 112 chr17 5874626 5874747 -83629806 + L2 LINE L2 2879 3015 -257 2275 77 3 3 chr17 5874747 5875046 -83629507 - AluSp SINE Alu -14 299 1 182 219 178 112 chr17 5875046 5875093 -83629460 + L2 LINE L2 3015 3058 -214 540 170 0 0 chr17 5875111 5875205 -83629348 - AluJ/FRAM SINE Alu -3 309 216 435 293 60 20 chr17 5875262 5875412 -83629141 + L2 LINE L2 3117 3272 0 268 360 82 19 chr17 5875530 5875797 -83628756 - L3b LINE CR1 -196 1387 1104 2321 97 3 0 chr17 5876892 5877201 -83627352 + AluSx SINE Alu 1 310 -2 383 192 0 67 chr17 5877942 5878135 -83626418 + (TGGG)n Simple_repeat Simple_repeat 1 180 0 344 266 41 0 chr17 5878261 5878500 -83626053 + G-rich Low_complexity Low_complexity 1 248 0 296 204 58 29 chr17 5878504 5878676 -83625877 + (GTGTG)n Simple_repeat Simple_repeat 4 180 0 1791 106 4 34 chr17 5880108 5880373 -83624180 + AluSq SINE Alu 1 257 -56 2424 68 0 0 chr17 5880388 5880684 -83623869 + AluY SINE Alu 1 296 -15 2254 68 41 0 chr17 5880684 5880979 -83623574 + AluY SINE Alu 1 307 -4 1356 124 0 16 chr17 5880979 5881173 -83623380 + AluSq SINE Alu 108 298 -15 2105 123 0 3 chr17 5882642 5882951 -83621602 - AluSx SINE Alu -4 308 1 1510 107 0 30 chr17 5883641 5883874 -83620679 - AluSg/x SINE Alu 0 312 87 2257 83 0 0 chr17 5884713 5885001 -83619552 + AluSq SINE Alu 25 312 -1 2147 119 3 0 chr17 5886681 5886983 -83617570 - AluSx SINE Alu -9 303 1 849 178 33 75 chr17 5887382 5887556 -83616997 + MIR SINE MIR 23 188 -74 2321 83 3 0 chr17 5887556 5887856 -83616697 + AluSx SINE Alu 1 301 -11 849 178 33 75 chr17 5887856 5887895 -83616658 + MIR SINE MIR 188 227 -35 1761 179 3 10 chr17 5887938 5888240 -83616313 + AluJo SINE Alu 5 304 -8 517 302 148 0 chr17 5888759 5888961 -83615592 + MIR SINE MIR 27 258 -4 2220 81 3 0 chr17 5888964 5889272 -83615281 - AluSx SINE Alu 0 309 1 2337 81 3 0 chr17 5889301 5889598 -83614955 + AluSp SINE Alu 1 298 -15 2283 85 0 3 chr17 5889625 5889919 -83614634 + AluSq SINE Alu 1 293 -20 208 303 13 13 chr17 5890068 5890144 -83614409 + L2 LINE L2 3016 3091 -181 2273 66 0 10 chr17 5890332 5890646 -83613907 + AluSx SINE Alu 1 311 0 1732 136 13 46 chr17 5890786 5891088 -83613465 + AluJo SINE Alu 1 292 -20 327 344 26 20 chr17 5891159 5891310 -83613243 + L2 LINE L2 3150 3301 -12 2295 86 0 3 chr17 5891369 5891670 -83612883 + AluSc SINE Alu 1 300 -9 182 296 155 0 chr17 5891670 5891741 -83612812 - MIR SINE MIR -116 146 65 1049 204 13 22 chr17 5891741 5891972 -83612581 + AluJo SINE Alu 71 299 -13 2120 75 4 4 chr17 5891978 5892290 -83612263 + AluY SINE Alu 4 315 0 933 141 0 0 chr17 5892322 5892464 -83612089 - AluJb SINE Alu -3 309 168 820 176 8 0 chr17 5892551 5892682 -83611871 + FLAM_C SINE Alu 1 132 -1 1964 118 6 38 chr17 5892701 5893015 -83611538 + AluSx SINE Alu 1 304 -8 2551 173 63 23 chr17 5893015 5893153 -83611400 - L1MA4 LINE L1 -12 6288 6157 2171 127 0 0 chr17 5893153 5893460 -83611093 - AluSx SINE Alu -5 307 1 2551 173 63 23 chr17 5893460 5893921 -83610632 - L1MA4 LINE L1 -143 6157 5665 1099 168 0 22 chr17 5893921 5894100 -83610453 - AluJb SINE Alu -4 308 134 198 0 0 0 chr17 5894100 5894122 -83610431 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2185 81 0 3 chr17 5894122 5894407 -83610146 - AluY SINE Alu -27 284 1 1699 148 10 30 chr17 5894410 5894759 -83609794 - AluJb SINE Alu 0 312 2 987 144 0 0 chr17 5894759 5894932 -83609621 - L1MA4 LINE L1 -634 5666 5494 313 128 0 169 chr17 5894933 5895085 -83609468 - Alu SINE Alu 0 302 236 2286 84 0 16 chr17 5895085 5895394 -83609159 - AluY SINE Alu -7 304 1 189 0 0 0 chr17 5895396 5895417 -83609136 + (T)n Simple_repeat Simple_repeat 1 21 0 804 140 0 44 chr17 5895424 5895560 -83608993 - AluJb SINE Alu -182 130 1 443 99 33 0 chr17 5895560 5895651 -83608902 - L1MA4 LINE L1 -812 5488 5395 3762 152 18 47 chr17 5895658 5895725 -83608828 - L1MB7 LINE L1 0 6184 6117 2112 137 0 6 chr17 5895725 5896038 -83608515 + AluJb SINE Alu 1 311 -1 3762 152 18 47 chr17 5896038 5896358 -83608195 - L1MB7 LINE L1 -67 6117 5825 1574 170 0 74 chr17 5896358 5896694 -83607859 - AluJo SINE Alu -1 311 1 3762 152 18 47 chr17 5896694 5897035 -83607518 - L1MB7 LINE L1 -359 5825 5476 720 155 0 0 chr17 5897054 5897157 -83607396 - FRAM SINE Alu -37 139 37 481 95 0 0 chr17 5897157 5897231 -83607322 + L1M4 LINE L1 5415 5488 -690 2022 128 7 3 chr17 5897231 5897529 -83607024 + AluSx SINE Alu 1 299 -13 848 142 8 0 chr17 5897539 5897673 -83606880 + AluJ SINE Alu 1 135 -177 2172 99 14 3 chr17 5897673 5897966 -83606587 + AluSg SINE Alu 1 296 -14 2061 141 0 3 chr17 5898789 5899102 -83605451 - AluSx SINE Alu 0 312 1 241 294 76 22 chr17 5899122 5899214 -83605339 - MIR3 SINE MIR -52 156 60 184 311 54 27 chr17 5900336 5900410 -83604143 + MIR3 SINE MIR 110 185 -23 829 216 6 0 chr17 5900508 5900670 -83603883 + AluJ SINE Alu 134 296 -16 2132 111 7 0 chr17 5900673 5900970 -83603583 + AluSp SINE Alu 1 299 -14 2074 128 0 0 chr17 5900979 5901277 -83603276 - AluY SINE Alu -13 298 1 1906 151 7 3 chr17 5901991 5902290 -83602263 + AluJo SINE Alu 4 303 -9 365 345 14 20 chr17 5902767 5902915 -83601638 - MIR SINE MIR 0 262 116 2589 43 0 0 chr17 5902989 5903292 -83601261 - AluY SINE Alu -8 303 1 2053 107 40 3 chr17 5905470 5905769 -83598784 - AluSx SINE Alu -2 310 1 2348 58 0 3 chr17 5905800 5906092 -83598461 + AluY SINE Alu 1 291 -20 1140 259 22 13 chr17 5907762 5908021 -83596532 - MER58B DNA MER1_type -2079 341 77 2325 95 0 0 chr17 5908021 5908325 -83596228 + AluSx SINE Alu 1 304 -8 1140 259 22 13 chr17 5908325 5908378 -83596175 - MER58B DNA MER1_type -2343 77 26 2292 87 0 3 chr17 5908388 5908686 -83595867 - AluSg SINE Alu -13 297 1 2203 87 0 31 chr17 5908699 5909020 -83595533 - AluY SINE Alu 0 311 1 928 95 0 29 chr17 5909212 5909349 -83595204 - AluSq/x SINE Alu -180 133 1 246 32 0 0 chr17 5912853 5912884 -83591669 + (CAG)n Simple_repeat Simple_repeat 1 31 0 2116 85 0 0 chr17 5913139 5913410 -83591143 + AluSx SINE Alu 24 294 -18 1988 113 23 17 chr17 5913535 5913837 -83590716 + AluSg SINE Alu 1 304 -6 2267 71 3 22 chr17 5913871 5914182 -83590371 - AluSp SINE Alu -8 305 1 271 295 0 0 chr17 5914826 5914931 -83589622 + (CAG)n Simple_repeat Simple_repeat 1 105 0 330 301 9 44 chr17 5914965 5915224 -83589329 + CT-rich Low_complexity Low_complexity 1 249 0 275 293 20 14 chr17 5915255 5915402 -83589151 + CT-rich Low_complexity Low_complexity 1 148 0 309 100 0 0 chr17 5915788 5915838 -83588715 + (CAG)n Simple_repeat Simple_repeat 3 52 0 297 75 0 0 chr17 5916368 5916408 -83588145 + (CA)n Simple_repeat Simple_repeat 2 41 0 321 309 118 22 chr17 5917138 5917274 -83587279 + MIR SINE MIR 40 188 -74 321 341 40 8 chr17 5919983 5920109 -83584444 - MIR SINE MIR -59 149 20 21 0 0 0 chr17 5924342 5924363 -83580190 + GC_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr17 5924493 5924533 -83580020 + GC_rich Low_complexity Low_complexity 1 40 0 2316 76 0 7 chr17 5929051 5929339 -83575214 - AluSc SINE Alu -23 286 1 1002 159 0 69 chr17 5929355 5929544 -83575009 - FRAM SINE Alu 0 176 1 440 218 61 75 chr17 5929546 5929693 -83574860 - MER5A DNA MER1_type 0 189 45 217 217 43 0 chr17 5929951 5929997 -83574556 - MIR SINE MIR -92 170 123 1764 133 13 53 chr17 5930449 5930750 -83573803 + AluJo SINE Alu 1 289 -23 2403 88 0 3 chr17 5930760 5931057 -83573496 + AluSx SINE Alu 1 296 -16 731 119 0 0 chr17 5931673 5931791 -83572762 + L1M LINE L1 5296 5413 -889 588 146 0 39 chr17 5931793 5931896 -83572657 + FLAM_A SINE Alu 40 138 -4 364 179 13 0 chr17 5931906 5931984 -83572569 + AluSp/q SINE Alu 225 303 0 2905 88 21 0 chr17 5931987 5932417 -83572136 + L1MA1 LINE L1 5755 6193 -109 2533 45 3 16 chr17 5932464 5932773 -83571780 + AluY SINE Alu 1 305 -6 992 133 0 0 chr17 5932942 5933077 -83571476 + AluSq/x SINE Alu 1 135 -178 2021 112 24 7 chr17 5933077 5933373 -83571180 + AluSg SINE Alu 1 301 -9 887 131 0 5 chr17 5933860 5934265 -83570288 + (CA)n Simple_repeat Simple_repeat 1 402 0 2061 93 29 0 chr17 5934551 5934831 -83569722 - AluSx SINE Alu -11 301 14 251 149 27 54 chr17 5934952 5935026 -83569527 + MLT1K LTR MaLR 188 259 -329 2623 44 0 0 chr17 5935329 5935627 -83568926 + AluY SINE Alu 5 302 -9 1036 154 5 53 chr17 5935627 5935815 -83568738 + AluSg/x SINE Alu 132 310 0 872 183 0 0 chr17 5935829 5935971 -83568582 + FLAM_C SINE Alu 1 142 -1 681 92 0 0 chr17 5935995 5936082 -83568471 + AluS SINE Alu 2 88 -225 188 143 24 0 chr17 5936524 5936566 -83567987 + GA-rich Low_complexity Low_complexity 5 47 0 2345 106 3 0 chr17 5936722 5937033 -83567520 + AluSx SINE Alu 1 312 0 2463 88 3 0 chr17 5937361 5937667 -83566886 + AluSx SINE Alu 1 307 -5 1284 174 9 30 chr17 5937679 5937909 -83566644 - AluJo SINE Alu -46 266 42 2144 103 16 19 chr17 5938019 5938329 -83566224 - AluSc SINE Alu 0 309 1 2078 115 61 0 chr17 5938344 5938639 -83565914 - AluSp SINE Alu 0 313 1 674 129 48 40 chr17 5938679 5938803 -83565750 + AluJo SINE Alu 11 135 -177 2188 113 27 0 chr17 5938832 5939125 -83565428 + AluSx SINE Alu 1 301 -11 183 407 50 29 chr17 5939260 5939400 -83565153 - L2 LINE L2 -92 3180 3038 1666 179 18 4 chr17 5939684 5939994 -83564559 - AluJb SINE Alu 0 314 1 2161 117 3 0 chr17 5940006 5940321 -83564232 - AluSx SINE Alu 0 316 1 1899 145 0 26 chr17 5940324 5940634 -83563919 - AluSx SINE Alu -10 302 1 254 216 39 0 chr17 5940649 5940700 -83563853 - MER66B LTR ERV1 -143 343 291 2738 203 71 50 chr17 5940734 5940776 -83563777 + L1MC4 LINE L1 7181 7221 -821 2233 81 7 42 chr17 5940776 5941084 -83563469 + AluSq SINE Alu 1 297 -16 2738 203 71 50 chr17 5941084 5941884 -83562669 + L1MC4 LINE L1 7221 8041 -1 1634 180 13 28 chr17 5941956 5942273 -83562280 - AluJb SINE Alu 0 312 1 279 275 72 14 chr17 5942293 5942431 -83562122 + L1ME LINE L1 5727 5872 -298 1682 148 35 4 chr17 5942433 5942689 -83561864 + AluSx SINE Alu 1 264 -48 1417 161 17 25 chr17 5943134 5943203 -83561350 + AluJo SINE Alu 52 120 -196 2314 101 0 0 chr17 5943203 5943500 -83561053 - AluSq SINE Alu -16 297 1 1417 161 17 25 chr17 5943500 5943697 -83560856 + AluJo SINE Alu 120 316 0 2158 113 3 0 chr17 5943884 5944202 -83560351 + AluSx SINE Alu 1 319 0 2236 85 41 10 chr17 5944266 5944560 -83559993 + AluSq SINE Alu 3 305 -8 246 304 43 0 chr17 5944564 5944725 -83559828 + L1M4 LINE L1 2271 2438 -3708 1465 222 96 36 chr17 5944728 5945202 -83559351 + MLT1D LTR MaLR 1 423 -5 483 326 34 6 chr17 5945204 5945379 -83559174 + L1M4 LINE L1 2435 2614 -3532 1667 173 61 0 chr17 5945457 5945735 -83558818 + AluJb SINE Alu 1 295 -17 967 129 58 7 chr17 5945772 5945927 -83558626 + AluJb SINE Alu 114 276 -36 1495 167 24 45 chr17 5945927 5945948 -83558605 - MLT2D LTR ERVL -25 389 369 183 100 0 0 chr17 5945948 5945978 -83558575 + (CA)n Simple_repeat Simple_repeat 2 31 0 1495 167 24 45 chr17 5945978 5946291 -83558262 - MLT2D LTR ERVL -45 369 62 1094 177 21 0 chr17 5946311 5946497 -83558056 - AluSg/x SINE Alu -1 311 122 497 142 19 47 chr17 5946497 5946603 -83557950 - L1MDa LINE L1 -6437 103 1 541 143 0 0 chr17 5946610 5946701 -83557852 - FLAM_A SINE Alu -2 140 50 453 93 0 53 chr17 5946763 5946838 -83557715 + MLT2C2 LTR ERVL 1 71 -393 2058 143 20 0 chr17 5946838 5947138 -83557415 + AluSx SINE Alu 1 306 -6 958 115 0 8 chr17 5947146 5947276 -83557277 + AluSq/x SINE Alu 1 129 -183 2399 97 7 0 chr17 5947277 5947587 -83556966 + AluSx SINE Alu 1 312 0 1223 150 0 0 chr17 5947644 5947824 -83556729 - AluSq SINE Alu 0 313 134 1532 159 29 84 chr17 5947824 5947981 -83556572 - AluJo SINE Alu -10 302 169 2620 52 0 13 chr17 5947981 5948288 -83556265 + AluY SINE Alu 1 303 -8 1532 159 29 84 chr17 5948288 5948439 -83556114 - AluJo SINE Alu -143 169 11 1964 177 7 49 chr17 5948464 5948589 -83555964 - L1PB4 LINE L1 0 6156 6027 2236 95 27 0 chr17 5948589 5948883 -83555670 - AluSx SINE Alu -10 302 1 1964 177 7 49 chr17 5948883 5949163 -83555390 - L1PB4 LINE L1 -129 6027 5768 2428 91 0 0 chr17 5949172 5949468 -83555085 - AluSx SINE Alu -16 296 1 881 171 0 38 chr17 5949479 5949637 -83554916 - FRAM SINE Alu -24 152 1 246 103 0 0 chr17 5949639 5949678 -83554875 - L1M2 LINE L1 -520 5780 5742 2348 90 3 3 chr17 5950105 5950404 -83554149 - AluSc SINE Alu -9 300 2 2989 9 0 0 chr17 5950422 5950740 -83553813 - AluYb8 SINE Alu 0 318 1 1913 136 3 53 chr17 5950772 5951144 -83553409 + AluJb SINE Alu 5 360 0 2254 76 9 54 chr17 5951167 5951483 -83553070 + AluSx SINE Alu 1 302 -10 4739 96 0 85 chr17 5951799 5952244 -83552309 - LTR8 LTR ERV1 -1 690 334 2389 85 7 0 chr17 5952244 5952551 -83552002 - AluSx SINE Alu -1 311 3 4739 96 0 85 chr17 5952551 5952859 -83551694 - LTR8 LTR ERV1 -357 334 1 875 167 0 0 chr17 5952887 5953025 -83551528 - AluJb SINE Alu -6 306 169 1603 163 4 4 chr17 5953025 5953271 -83551282 + AluJb SINE Alu 40 285 -27 2636 40 0 10 chr17 5953338 5953640 -83550913 - AluY SINE Alu -12 299 1 245 272 98 80 chr17 5953641 5953865 -83550688 + L1M4 LINE L1 3526 3753 -2393 2025 117 4 0 chr17 5953865 5954138 -83550415 + AluSp SINE Alu 1 274 -39 1221 124 119 0 chr17 5954139 5954341 -83550212 + AluSc SINE Alu 71 296 -13 227 271 0 21 chr17 5954664 5954712 -83549841 - L2 LINE L2 -196 3076 3030 1361 111 0 0 chr17 5955599 5955771 -83548782 + AluSq SINE Alu 1 172 -141 231 323 10 10 chr17 5955935 5956034 -83548519 + L1MC4a LINE L1 5755 5853 -1955 862 134 0 0 chr17 5956049 5956168 -83548385 - AluSp/q SINE Alu -19 294 176 1022 138 0 7 chr17 5956168 5956320 -83548233 - AluSg/x SINE Alu -8 304 154 274 143 0 0 chr17 5956320 5956362 -83548191 - Alu SINE Alu -266 42 1 270 191 12 36 chr17 5956364 5956448 -83548105 + L1MC4a LINE L1 5858 5939 -1869 1739 113 0 0 chr17 5956448 5956679 -83547874 + AluSx SINE Alu 1 231 -81 1495 141 0 0 chr17 5956780 5956993 -83547560 + AluSg/x SINE Alu 100 312 0 333 257 37 37 chr17 5957038 5957147 -83547406 + MIR SINE MIR 154 262 0 1871 148 16 29 chr17 5957268 5957578 -83546975 + AluSx SINE Alu 1 306 -6 2128 104 0 11 chr17 5957638 5957949 -83546604 + AluSx SINE Alu 1 308 0 915 91 0 0 chr17 5957972 5958082 -83546471 + AluSq/x SINE Alu 1 110 -202 452 240 70 75 chr17 5958183 5958334 -83546219 + L1ME LINE L1 5133 5284 -862 1797 149 67 0 chr17 5958334 5958602 -83545951 + AluSx SINE Alu 1 286 -26 452 240 70 75 chr17 5958602 5958650 -83545903 + L1ME LINE L1 5284 5331 -815 2551 71 0 0 chr17 5958651 5958962 -83545591 + AluY SINE Alu 1 311 0 1107 119 0 36 chr17 5958980 5959148 -83545405 + AluSg/x SINE Alu 144 305 -5 327 282 77 72 chr17 5959150 5959345 -83545208 + L1ME LINE L1 5325 5462 -700 825 183 0 0 chr17 5960225 5960362 -83544191 - FLAM_C SINE Alu -4 139 3 368 318 72 26 chr17 5960502 5960697 -83543856 + L1MC/D LINE L1 5372 5575 -2233 29 28 0 0 chr17 5960797 5960833 -83543720 + AT_rich Low_complexity Low_complexity 1 36 0 2046 138 0 0 chr17 5961288 5961614 -83542939 + AluSx SINE Alu 1 326 0 2320 92 3 7 chr17 5962147 5962439 -83542114 - AluSp SINE Alu -22 291 1 189 418 0 0 chr17 5962444 5962535 -83542018 - L2 LINE L2 -226 3046 2956 2389 84 7 7 chr17 5962712 5963021 -83541532 - AluY SINE Alu -2 309 1 1670 158 21 0 chr17 5963032 5963323 -83541230 - L1MB7 LINE L1 -6 6178 5882 189 366 117 24 chr17 5963325 5963623 -83540930 - L2 LINE L2 -568 2746 2421 297 213 98 41 chr17 5963887 5964009 -83540544 - MER103 DNA DNA -2 164 36 2643 44 0 0 chr17 5964259 5964555 -83539998 + AluY SINE Alu 1 296 -15 1326 79 129 10 chr17 5965102 5965304 -83539249 - MER30 DNA MER1_type 0 230 5 28 61 0 0 chr17 5965434 5965483 -83539070 + AT_rich Low_complexity Low_complexity 1 49 0 1829 162 3 24 chr17 5965674 5965970 -83538583 + AluJb SINE Alu 1 290 -22 311 298 53 7 chr17 5966043 5966194 -83538359 - L1ME LINE L1 -331 5790 5633 364 105 0 0 chr17 5966430 5966487 -83538066 + Alu SINE Alu 244 300 -2 375 187 60 84 chr17 5966529 5966695 -83537858 - MIR SINE MIR -9 253 92 185 347 92 52 chr17 5966738 5967064 -83537489 + L2 LINE L2 2820 3158 -114 814 171 0 0 chr17 5967208 5967337 -83537216 + AluJo/FLAM SINE Alu 5 133 -179 1751 171 10 14 chr17 5967340 5967632 -83536921 + AluJb SINE Alu 1 291 -21 436 316 37 18 chr17 5968656 5968874 -83535679 + L2 LINE L2 2596 2817 -497 1280 168 10 10 chr17 5969796 5970004 -83534549 + AluSg/x SINE Alu 87 294 -18 363 216 88 24 chr17 5970115 5970240 -83534313 - L1ME4a LINE L1 -27 6094 5962 1455 117 47 0 chr17 5970284 5970497 -83534056 - AluJb SINE Alu -5 307 85 2308 88 7 10 chr17 5970520 5970814 -83533739 - AluSg SINE Alu -17 293 1 339 251 53 37 chr17 5970815 5971002 -83533551 - L1ME4a LINE L1 -179 5942 5753 2045 129 10 0 chr17 5971015 5971309 -83533244 - AluSx SINE Alu -15 297 1 1148 204 40 42 chr17 5971363 5971716 -83532837 - MER74A LTR ERVL -63 495 144 1257 196 116 7 chr17 5972276 5972552 -83532001 - L1MB5 LINE L1 -1 6173 5868 374 297 254 20 chr17 5972552 5972601 -83531952 + L2 LINE L2 1963 1999 -1315 2299 61 0 0 chr17 5972601 5972896 -83531657 + AluY SINE Alu 1 295 -16 374 297 254 20 chr17 5972896 5973189 -83531364 + L2 LINE L2 1999 2385 -929 287 360 61 20 chr17 5973258 5973405 -83531148 + L2 LINE L2 3116 3268 -4 283 298 46 14 chr17 5974563 5974709 -83529844 - MIR SINE MIR -50 212 65 1973 124 10 0 chr17 5975533 5975840 -83528713 - AluSg SINE Alu 0 310 1 216 333 90 17 chr17 5976512 5976689 -83527864 - L2 LINE L2 -245 3027 2838 1824 79 86 11 chr17 5976772 5977052 -83527501 + AluSx SINE Alu 1 301 -11 25 0 0 0 chr17 5977380 5977405 -83527148 + AT_rich Low_complexity Low_complexity 1 25 0 2325 222 100 39 chr17 5977861 5978713 -83525840 - L1ME3A LINE L1 0 6170 5267 2048 127 0 0 chr17 5978769 5979068 -83525485 - AluSx SINE Alu -13 299 1 243 0 0 0 chr17 5979293 5979320 -83525233 + (CA)n Simple_repeat Simple_repeat 2 28 0 2063 73 4 4 chr17 5979345 5979617 -83524936 - AluSg SINE Alu -38 272 1 2023 97 7 29 chr17 5979796 5980105 -83524448 - AluSq SINE Alu -11 302 1 1745 103 0 8 chr17 5980919 5981172 -83523381 + AluSg SINE Alu 45 295 -15 2267 91 7 0 chr17 5981740 5982047 -83522506 - AluSp SINE Alu -4 309 1 206 167 0 24 chr17 5982255 5982297 -83522256 + (TATG)n Simple_repeat Simple_repeat 4 44 0 958 262 121 32 chr17 5982308 5982811 -83521742 - L1MC4 LINE L1 -142 7900 7353 829 234 172 39 chr17 5982813 5983004 -83521549 - L1MC4a LINE L1 -1377 6431 6267 2406 62 0 0 chr17 5983004 5983312 -83521241 - AluY SINE Alu -1 310 3 829 234 172 39 chr17 5983312 5983585 -83520968 - L1MC4a LINE L1 -1541 6267 5905 502 291 21 121 chr17 5983704 5983993 -83520560 + L2 LINE L2 2996 3255 -17 1046 76 0 0 chr17 5984211 5984342 -83520211 + AluSg SINE Alu 1 131 -179 786 262 50 57 chr17 5984472 5984754 -83519799 - MLT2F LTR ERVL -367 296 17 1221 192 28 0 chr17 5984857 5985112 -83519441 + L1MD3 LINE L1 7734 7995 0 927 85 4 2 chr17 5985296 5985553 -83519000 + AluSq SINE Alu 1 313 0 2173 105 0 13 chr17 5986282 5986595 -83517958 + AluSx SINE Alu 1 309 -3 182 342 0 51 chr17 5987368 5987447 -83517106 + L3b LINE CR1 1433 1507 -76 261 0 0 0 chr17 5987670 5987699 -83516854 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 369 62 0 0 chr17 5987698 5987746 -83516807 + (CA)n Simple_repeat Simple_repeat 1 48 0 385 323 37 25 chr17 5987755 5987916 -83516637 + MIR SINE MIR 97 259 -3 297 256 136 48 chr17 5987964 5988089 -83516464 - MIR SINE MIR -74 188 53 217 167 0 30 chr17 5988796 5988862 -83515691 + GA-rich Low_complexity Low_complexity 2 65 0 263 226 17 52 chr17 5988871 5988986 -83515567 + (CAGAGA)n Simple_repeat Simple_repeat 6 116 0 531 273 14 7 chr17 5989068 5989207 -83515346 - MIR SINE MIR 0 262 123 748 258 220 18 chr17 5989413 5989754 -83514799 + L2 LINE L2 2904 3313 0 1174 301 46 26 chr17 5990027 5990442 -83514111 + LTR16A LTR ERVL 21 443 -7 577 303 12 47 chr17 5990468 5990722 -83513831 - L3 LINE CR1 -163 1414 1170 315 267 48 38 chr17 5991916 5992021 -83512532 - L2 LINE L2 -12 3260 3155 475 266 57 0 chr17 5992188 5992312 -83512241 + Charlie8 DNA MER1_type 92 222 -2195 304 309 0 94 chr17 5992405 5992554 -83511999 - L2 LINE L2 -238 3034 2900 2156 114 3 7 chr17 5992675 5992983 -83511570 + AluSx SINE Alu 5 311 -1 2098 220 50 45 chr17 5993107 5993643 -83510910 - MLT1G1 LTR MaLR -5 590 52 1496 178 23 33 chr17 5993646 5994134 -83510419 + AluJo SINE Alu 1 485 0 1128 71 0 33 chr17 5993950 5994178 -83510375 + (GAAA)n Simple_repeat Simple_repeat 3 224 0 1166 290 6 9 chr17 5994204 5994525 -83510028 - L2 LINE L2 -1018 2296 1977 195 296 26 70 chr17 5994539 5994654 -83509899 - L2 LINE L2 -563 2751 2642 2188 88 0 0 chr17 5995131 5995425 -83509128 + AluY SINE Alu 1 294 -17 214 239 226 9 chr17 5996103 5996260 -83508293 + MIR SINE MIR 35 262 0 808 236 106 22 chr17 5996499 5996946 -83507607 - LTR33A LTR ERVL 0 523 2 503 301 162 27 chr17 5997467 5997832 -83506721 + L2 LINE L2 2900 3313 0 222 265 0 0 chr17 5997832 5997900 -83506653 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 230 336 35 0 chr17 5997914 5998027 -83506526 + (TGGA)n Simple_repeat Simple_repeat 1 117 0 299 227 10 0 chr17 5998034 5998131 -83506422 + (TGGG)n Simple_repeat Simple_repeat 2 99 0 1306 224 33 15 chr17 5998559 5998889 -83505664 + MLT2C1 LTR ERVL 1 336 -61 374 119 0 15 chr17 5998893 5998960 -83505593 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 234 277 67 118 chr17 5999586 5999781 -83504772 - L2 LINE L2 -93 3179 2995 665 316 14 19 chr17 5999808 6000017 -83504536 - MIR SINE MIR -18 244 37 1723 175 3 0 chr17 6000046 6000331 -83504222 - AluJb SINE Alu -26 286 1 22 35 0 0 chr17 6000556 6000585 -83503968 + AT_rich Low_complexity Low_complexity 1 29 0 547 190 28 28 chr17 6000677 6000819 -83503734 + MER96B DNA MER1_type? 192 333 -84 418 330 19 39 chr17 6000897 6001103 -83503450 - L2 LINE L2 -433 2881 2680 2175 122 39 28 chr17 6001274 6001636 -83502917 + THE1C LTR MaLR 8 373 -2 2332 163 18 50 chr17 6002043 6002545 -83502008 + L1ME2 LINE L1 5677 6162 -2 1016 156 28 69 chr17 6002658 6002876 -83501677 + MER3 DNA MER1_type 1 209 0 263 369 63 0 chr17 6003091 6003202 -83501351 - HAL1 LINE L1 -1635 872 755 492 309 114 61 chr17 6003334 6003774 -83500779 - HAL1 LINE L1 -2044 463 1 369 290 30 38 chr17 6005407 6005538 -83499015 - MLT1J LTR MaLR -152 359 230 2200 98 0 0 chr17 6005538 6005835 -83498718 + AluY SINE Alu 1 297 -14 467 235 115 68 chr17 6005862 6006096 -83498457 - MLT1J LTR MaLR -257 254 10 213 389 0 8 chr17 6007724 6007850 -83496703 + (CA)n Simple_repeat Simple_repeat 1 125 0 2120 103 0 3 chr17 6008109 6008401 -83496152 + AluSx SINE Alu 1 291 -21 2065 166 133 33 chr17 6008445 6008903 -83495650 - MLT1D LTR MaLR -1 504 1 2086 111 13 0 chr17 6009018 6009325 -83495228 - AluSx SINE Alu -1 311 1 763 244 29 6 chr17 6009332 6009504 -83495049 + MIR SINE MIR 48 223 -39 251 273 55 9 chr17 6009859 6009969 -83494584 - MLT1G1-int LTR MaLR -1618 117 3 360 204 48 39 chr17 6009971 6010074 -83494479 - MLT1G1 LTR MaLR 0 549 446 461 274 0 0 chr17 6010207 6010309 -83494244 + MIR SINE MIR 45 146 -62 1874 125 36 0 chr17 6010311 6010592 -83493961 + AluJo SINE Alu 2 292 -20 736 262 4 42 chr17 6010971 6011208 -83493345 - MLT2F LTR ERVL 0 663 436 2905 195 84 14 chr17 6011222 6011317 -83493236 - MER63C DNA MER1_type -143 917 830 1748 134 42 18 chr17 6011317 6011601 -83492952 + AluSx SINE Alu 1 291 -21 2905 195 84 14 chr17 6011601 6012126 -83492427 - MER63C DNA MER1_type -230 830 254 1417 263 36 39 chr17 6012167 6012578 -83491975 - MLT2F LTR ERVL -237 426 17 254 193 0 53 chr17 6012661 6012718 -83491835 - MLT2F LTR ERVL -593 70 17 1264 249 75 48 chr17 6014421 6014803 -83489750 - MLT1G1 LTR MaLR -210 341 1 1882 156 10 0 chr17 6015074 6015369 -83489184 + AluSx SINE Alu 1 298 -14 1266 213 39 110 chr17 6015494 6015986 -83488567 - MLT2B1 LTR ERVL -62 458 2 275 277 116 18 chr17 6016244 6016356 -83488197 - L2 LINE L2 -18 3254 3132 2167 105 3 10 chr17 6016736 6017156 -83487397 - AluSx SINE Alu 0 418 1 565 272 52 28 chr17 6017223 6017401 -83487152 - MIR SINE MIR -33 229 44 2002 146 26 19 chr17 6017401 6017778 -83486775 - L1MA4 LINE L1 -6 6294 5915 565 272 52 28 chr17 6017778 6017812 -83486741 - MIR SINE MIR -218 44 12 791 142 80 40 chr17 6018292 6018468 -83486085 + MER96B DNA MER1_type? 1 183 -234 195 42 0 0 chr17 6018608 6018632 -83485921 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2145 103 0 3 chr17 6018668 6018970 -83485583 - AluSg SINE Alu -9 301 1 29 28 0 0 chr17 6019060 6019096 -83485457 + AT_rich Low_complexity Low_complexity 1 36 0 1570 295 108 49 chr17 6019136 6019332 -83485221 - L1M4c LINE L1 -2005 4141 3958 2486 24 3 3 chr17 6019332 6019626 -83484927 - AluY SINE Alu -17 294 1 1570 295 108 49 chr17 6019626 6020121 -83484432 - L1M4c LINE L1 -2188 3958 3493 2245 109 0 3 chr17 6020121 6020432 -83484121 - AluSx SINE Alu -2 310 1 1570 295 108 49 chr17 6020432 6021385 -83483168 - L1M4c LINE L1 -2653 3493 2400 2407 76 0 0 chr17 6021624 6021928 -83482625 - AluSg SINE Alu -6 304 1 21 95 0 0 chr17 6022078 6022141 -83482412 + AT_rich Low_complexity Low_complexity 1 63 0 280 211 7 145 chr17 6022471 6022557 -83481996 - L1M4c LINE L1 -781 1647 1551 189 0 0 0 chr17 6022557 6022578 -83481975 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1673 184 7 0 chr17 6022581 6022869 -83481684 - AluJb SINE Alu -22 290 1 280 211 7 145 chr17 6022869 6022930 -83481623 - L1M4c LINE L1 -879 1549 483 369 195 37 43 chr17 6023131 6023295 -83481258 + A-rich Low_complexity Low_complexity 2 164 0 235 173 15 68 chr17 6023457 6023590 -83480963 + (TAA)n Simple_repeat Simple_repeat 1 126 0 208 266 16 43 chr17 6023594 6023778 -83480775 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 * 291 134 60 67 chr17 6023677 6023811 -83480742 + (AATAG)n Simple_repeat Simple_repeat 5 137 0 364 305 83 50 chr17 6023835 6024137 -83480416 + L1MEd LINE L1 808 1119 -5000 413 294 16 16 chr17 6025001 6025127 -83479426 - FLAM_A SINE Alu -6 127 2 374 87 5 103 chr17 6025319 6025514 -83479039 + (TGGGGG)n Simple_repeat Simple_repeat 2 177 0 * 436 33 50 83 chr17 6025475 6025656 -83478897 + (GTGTG)n Simple_repeat Simple_repeat 4 178 0 357 96 60 42 chr17 6025681 6025848 -83478705 + (GGGTG)n Simple_repeat Simple_repeat 5 174 0 567 98 12 49 chr17 6025911 6026074 -83478479 + (TGGG)n Simple_repeat Simple_repeat 1 157 0 375 239 0 0 chr17 6026078 6026195 -83478358 + G-rich Low_complexity Low_complexity 1 117 0 2217 265 37 23 chr17 6026614 6027471 -83477082 - L1M4 LINE L1 -2147 3999 3131 1214 157 113 47 chr17 6029188 6029532 -83475021 + L1MB3 LINE L1 5816 6182 -1 296 275 75 6 chr17 6029780 6029940 -83474613 + L1ME LINE L1 5274 5444 -677 2168 122 3 0 chr17 6029944 6030248 -83474305 + AluSx SINE Alu 7 311 -1 1418 203 52 41 chr17 6030544 6030933 -83473620 + L1ME2 LINE L1 5755 6144 -20 1525 184 122 6 chr17 6031158 6031494 -83473059 + L1MC4 LINE L1 6529 6903 -1139 21 0 0 0 chr17 6031498 6031519 -83473034 + AT_rich Low_complexity Low_complexity 1 21 0 1465 177 3 46 chr17 6031522 6031805 -83472748 + AluJo SINE Alu 5 275 -37 623 280 160 6 chr17 6031868 6032193 -83472360 + L1ME LINE L1 5430 5804 -317 1492 193 0 11 chr17 6032269 6032539 -83472014 - AluJb SINE Alu -24 288 22 250 143 0 24 chr17 6032544 6032586 -83471967 - FAM SINE Alu -35 144 104 * 291 145 84 72 chr17 6032572 6032655 -83471898 - FAM SINE Alu -31 144 61 429 113 0 0 chr17 6032896 6032967 -83471586 + Alu SINE Alu 239 309 -1 2201 116 3 0 chr17 6035085 6035386 -83469167 - AluSx SINE Alu -10 302 1 21 57 0 0 chr17 6036768 6036803 -83467750 + AT_rich Low_complexity Low_complexity 1 35 0 710 140 18 0 chr17 6036803 6036917 -83467636 - FLAM_C SINE Alu -26 117 2 201 317 39 29 chr17 6037510 6037614 -83466939 - L2 LINE L2 -240 3032 2928 2219 109 0 3 chr17 6037694 6037987 -83466566 - AluSq SINE Alu -21 292 1 328 316 59 33 chr17 6038297 6038449 -83466104 - MER5B DNA MER1_type -22 156 1 23 0 0 0 chr17 6039662 6039685 -83464868 + GC_rich Low_complexity Low_complexity 1 23 0 681 181 0 0 chr17 6040571 6040676 -83463877 + AluSg/x SINE Alu 146 250 -62 1288 159 0 26 chr17 6040676 6040908 -83463645 + AluJb SINE Alu 85 310 -2 2147 135 3 0 chr17 6040972 6041275 -83463278 - AluSx SINE Alu -8 304 1 975 266 54 43 chr17 6041275 6041624 -83462929 - MER67C LTR ERV1 -201 509 157 1155 170 35 25 chr17 6043321 6043521 -83461032 - AluJo SINE Alu -25 287 86 746 234 177 54 chr17 6044378 6044616 -83459937 + MLT1D LTR MaLR 1 258 -132 2388 86 3 3 chr17 6044616 6044917 -83459636 + AluSx SINE Alu 1 301 -11 746 234 177 54 chr17 6044917 6045069 -83459484 + MLT1D LTR MaLR 258 390 0 2050 125 10 7 chr17 6045697 6046001 -83458552 + AluSx SINE Alu 1 305 -7 850 173 0 37 chr17 6046001 6046151 -83458402 + AluSg/x SINE Alu 134 288 -24 279 0 0 0 chr17 6046151 6046182 -83458371 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1856 160 0 10 chr17 6046182 6046482 -83458071 + AluJb SINE Alu 2 298 -14 2389 211 49 42 chr17 6046496 6047066 -83457487 + L1M4 LINE L1 3750 4327 -1819 1818 168 0 7 chr17 6047066 6047363 -83457190 - AluJo SINE Alu -17 295 1 2389 211 49 42 chr17 6047363 6047485 -83457068 + L1M4 LINE L1 4327 4447 -1699 264 108 0 0 chr17 6047488 6047525 -83457028 - THE1B LTR MaLR 0 364 328 1126 194 0 0 chr17 6047525 6047742 -83456811 + L1M4 LINE L1 4591 4807 -1339 859 144 0 0 chr17 6047754 6047872 -83456681 + AluSq/x SINE Alu 1 118 -194 1222 123 0 0 chr17 6047908 6048078 -83456475 - AluSg/x SINE Alu -12 298 129 869 162 7 7 chr17 6048090 6048238 -83456315 - AluYa5 SINE Alu -30 281 134 944 151 0 7 chr17 6048731 6048904 -83455649 - AluJb SINE Alu 0 311 140 2258 102 7 3 chr17 6048917 6049220 -83455333 - AluSx SINE Alu -8 304 1 302 252 26 52 chr17 6049554 6049669 -83454884 - L1ME LINE L1 -309 5855 5744 2158 120 3 0 chr17 6050073 6050365 -83454188 + AluSx SINE Alu 1 293 -19 1870 134 13 17 chr17 6051503 6051801 -83452752 - AluSx SINE Alu -15 297 1 755 161 35 0 chr17 6052270 6052413 -83452140 - L1MB7 LINE L1 -10 6174 6027 432 0 0 0 chr17 6052437 6052485 -83452068 + (CA)n Simple_repeat Simple_repeat 2 49 0 826 189 47 11 chr17 6052487 6052677 -83451876 - L1MB8 LINE L1 -140 6038 5842 1549 133 12 8 chr17 6052820 6053061 -83451492 - AluSx SINE Alu -16 296 55 2075 96 0 77 chr17 6053183 6053371 -83451182 - AluSx SINE Alu -13 299 145 2120 113 3 28 chr17 6053371 6053689 -83450864 - AluSg SINE Alu 0 310 1 2075 96 0 77 chr17 6053689 6053824 -83450729 - AluSx SINE Alu -167 145 1 189 107 0 0 chr17 6053843 6053871 -83450682 + (T)n Simple_repeat Simple_repeat 1 28 0 1574 154 0 55 chr17 6054157 6054469 -83450084 + AluJb SINE Alu 1 295 -17 1543 128 128 12 chr17 6054610 6054886 -83449667 - AluSg SINE Alu 0 308 4 891 175 6 47 chr17 6054922 6055093 -83449460 + FRAM SINE Alu 1 164 -2 203 299 52 13 chr17 6055351 6055428 -83449125 + L2 LINE L2 3193 3272 0 2350 79 10 7 chr17 6056268 6056573 -83447980 - AluSp SINE Alu -7 306 1 214 272 72 24 chr17 6058115 6058240 -83446313 + L2 LINE L2 1632 1762 -1552 263 313 0 0 chr17 6058792 6058856 -83445697 + L2 LINE L2 3020 3083 -189 2291 108 0 0 chr17 6060831 6061127 -83443426 - AluSx SINE Alu -14 298 3 2084 137 0 10 chr17 6061214 6061513 -83443040 + AluSx SINE Alu 1 296 -16 943 144 0 60 chr17 6061520 6061687 -83442866 + AluSq SINE Alu 136 292 -21 23 0 0 0 chr17 6061716 6061739 -83442814 + AT_rich Low_complexity Low_complexity 1 23 0 2245 110 0 7 chr17 6066740 6067048 -83437505 - AluSx SINE Alu -6 306 1 2074 106 11 11 chr17 6067052 6067335 -83437218 - AluY SINE Alu -28 283 1 241 233 35 47 chr17 6067835 6067921 -83436632 - MARNA DNA Mariner -76 510 426 2341 103 7 0 chr17 6068243 6068543 -83436010 + AluSx SINE Alu 1 302 -10 2376 87 7 0 chr17 6068631 6068929 -83435624 + AluSx SINE Alu 1 300 -12 1498 142 120 29 chr17 6069447 6069722 -83434831 - AluJo SINE Alu -12 300 1 372 282 77 45 chr17 6069769 6070023 -83434530 + MIR SINE MIR 1 258 -4 283 179 73 113 chr17 6071310 6071461 -83433092 - L1ME3 LINE L1 -78 6084 5940 1770 148 17 44 chr17 6071548 6071703 -83432850 - AluJb SINE Alu -23 289 144 2274 90 3 17 chr17 6071703 6072002 -83432551 - AluSg SINE Alu -15 295 1 1770 148 17 44 chr17 6072002 6072143 -83432410 - AluJb SINE Alu -168 144 1 2211 122 0 3 chr17 6072178 6072481 -83432072 - AluSg SINE Alu -6 304 3 935 290 78 31 chr17 6072675 6073164 -83431389 - L2 LINE L2 -836 2478 1967 497 324 66 28 chr17 6073174 6073398 -83431155 - L2 LINE L2 -67 3205 2966 225 0 0 0 chr17 6073398 6073423 -83431130 + (CTGGGG)n Simple_repeat Simple_repeat 1 25 0 497 324 66 28 chr17 6073423 6073485 -83431068 - L2 LINE L2 -306 2966 2908 1132 143 16 108 chr17 6074016 6074274 -83430279 - MER46A DNA MER2_type -1 235 2 1757 127 46 3 chr17 6074282 6074565 -83429988 - AluSx SINE Alu -17 295 1 3574 170 46 43 chr17 6074567 6074675 -83429878 - L1MB8 LINE L1 -5 6173 6067 2103 106 0 3 chr17 6074675 6074968 -83429585 + AluSq SINE Alu 1 292 -21 3574 170 46 43 chr17 6074968 6075666 -83428887 - L1MB8 LINE L1 -111 6067 5365 372 198 124 8 chr17 6075684 6075805 -83428748 - L1MB8 LINE L1 -863 5283 5149 1724 164 0 7 chr17 6075805 6076098 -83428455 + AluJb SINE Alu 1 291 -21 1300 224 119 17 chr17 6076105 6076458 -83428095 + MLT1D LTR MaLR 115 503 -2 471 199 14 55 chr17 6076463 6076609 -83427944 - L1MB8 LINE L1 -2091 4055 3916 1835 121 32 38 chr17 6076636 6076950 -83427603 - AluSx SINE Alu 0 312 1 2087 103 3 7 chr17 6077037 6077338 -83427215 - AluSx SINE Alu -12 300 1 2146 84 7 17 chr17 6077342 6077638 -83426915 - AluSc SINE Alu -16 293 1 2362 63 0 10 chr17 6077638 6077938 -83426615 - AluY SINE Alu -14 297 1 180 0 0 0 chr17 6077938 6077958 -83426595 + (T)n Simple_repeat Simple_repeat 1 20 0 451 236 48 34 chr17 6077982 6078262 -83426291 - L1MB8 LINE L1 -2708 3438 3120 1084 158 32 50 chr17 6078589 6078810 -83425743 - Tigger1 DNA MER2_type 0 2418 2202 572 169 127 28 chr17 6078799 6078941 -83425612 - Tigger1 DNA MER2_type -2261 157 2 * 2289 76 10 0 chr17 6078964 6079265 -83425288 + AluSg SINE Alu 1 304 -6 30 0 0 0 chr17 6079813 6079843 -83424710 + AT_rich Low_complexity Low_complexity 1 30 0 2194 88 7 0 chr17 6079849 6080146 -83424407 + AluSp SINE Alu 1 299 -14 1950 129 33 0 chr17 6080782 6081085 -83423468 + AluSp SINE Alu 1 313 0 181 225 113 14 chr17 6081172 6081243 -83423310 + MIR3 SINE MIR 100 177 -31 1066 144 18 140 chr17 6081420 6081469 -83423084 - L1MA5 LINE L1 -450 5850 5797 1501 182 52 0 chr17 6081469 6081738 -83422815 + AluJb SINE Alu 1 283 -19 1066 144 18 140 chr17 6081738 6081806 -83422747 - L1MA5 LINE L1 -503 5797 5722 1686 136 3 48 chr17 6081806 6081944 -83422609 + AluSx SINE Alu 1 144 -161 2144 108 0 3 chr17 6081944 6082251 -83422302 + AluSg SINE Alu 2 307 -3 1686 136 3 48 chr17 6082251 6082430 -83422123 + AluSx SINE Alu 144 305 0 1066 144 18 140 chr17 6082430 6082595 -83421958 - L1MA5 LINE L1 -578 5722 5601 2208 105 0 3 chr17 6083078 6083392 -83421161 + AluSq SINE Alu 1 313 0 192 304 139 13 chr17 6083725 6083804 -83420749 - L2 LINE L2 -18 3254 3166 302 319 173 34 chr17 6084128 6084158 -83420395 + L2 LINE L2 1798 1822 -1492 917 164 41 55 chr17 6084158 6084377 -83420176 + MER20 DNA MER1_type 3 218 -1 302 319 173 34 chr17 6084377 6084791 -83419762 + L2 LINE L2 1822 2304 -1010 1191 106 156 0 chr17 6085418 6085512 -83419041 + MER30 DNA MER1_type 1 79 -151 195 42 0 0 chr17 6085512 6085536 -83419017 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 1191 106 156 0 chr17 6085536 6085640 -83418913 + MER30 DNA MER1_type 79 230 0 185 330 11 78 chr17 6087012 6087191 -83417362 + L2 LINE L2 3030 3196 -76 486 278 88 78 chr17 6087714 6087839 -83416714 + L1ME4a LINE L1 5718 5840 -281 2480 69 0 0 chr17 6087839 6088144 -83416409 + AluSq SINE Alu 1 305 -8 486 278 88 78 chr17 6088144 6088324 -83416229 + L1ME4a LINE L1 5840 6026 -95 1033 273 145 26 chr17 6088331 6088916 -83415637 - L2 LINE L2 -9 3304 2661 753 117 8 17 chr17 6089205 6089325 -83415228 + AluJb SINE Alu 11 129 -183 209 364 53 30 chr17 6089886 6090018 -83414535 + L2 LINE L2 3133 3267 -5 2240 88 0 52 chr17 6090029 6090358 -83414195 + AluSx SINE Alu 1 312 0 310 98 0 0 chr17 6091145 6091186 -83413367 + Tigger7 DNA MER2_type 227 267 -466 * 444 167 0 83 chr17 6091184 6091280 -83413273 + Tigger7 DNA MER2_type 2489 2576 -11 1178 164 45 0 chr17 6091818 6092019 -83412534 - AluJb SINE Alu -102 210 1 336 330 40 17 chr17 6092283 6092459 -83412094 - MIR3 SINE MIR -9 199 20 2084 102 3 3 chr17 6092948 6093242 -83411311 - AluSp SINE Alu -19 294 1 1697 129 19 0 chr17 6093387 6093643 -83410910 + AluSx SINE Alu 1 261 -51 590 100 0 0 chr17 6093646 6093726 -83410827 + AluSg/x SINE Alu 212 291 -18 39 0 0 0 chr17 6093726 6093765 -83410788 + AT_rich Low_complexity Low_complexity 1 39 0 1859 146 3 3 chr17 6093765 6094067 -83410486 - AluSx SINE Alu -10 302 1 309 289 51 64 chr17 6094146 6094302 -83410251 - MIR SINE MIR -50 212 59 248 86 224 52 chr17 6094378 6094436 -83410117 - Tigger5 DNA MER2_type -5 2318 2251 * 323 182 0 0 chr17 6094405 6094460 -83410093 - Tigger5 DNA MER2_type -2268 55 1 446 117 0 0 chr17 6094482 6094542 -83410011 + Tigger5 DNA MER2_type 2264 2323 0 2346 95 0 0 chr17 6094610 6094914 -83409639 + AluSx SINE Alu 1 304 -8 222 37 0 0 chr17 6094928 6094955 -83409598 + (CA)n Simple_repeat Simple_repeat 2 28 0 1317 163 47 57 chr17 6095580 6095881 -83408672 - AluJb SINE Alu -3 299 2 898 164 0 44 chr17 6096049 6096232 -83408321 + AluJb SINE Alu 125 299 -13 260 225 67 67 chr17 6096256 6096304 -83408249 - L2 LINE L2 -85 3228 3181 1833 142 0 0 chr17 6096304 6096605 -83407948 + AluSx SINE Alu 1 301 0 2174 91 7 13 chr17 6096607 6096915 -83407638 + AluSq SINE Alu 1 306 -7 260 225 67 67 chr17 6096915 6096951 -83407602 - L2 LINE L2 -132 3181 3140 2094 91 7 0 chr17 6097013 6097299 -83407254 - AluSx SINE Alu -24 288 1 262 303 64 9 chr17 6097766 6097875 -83406678 + L2 LINE L2 3023 3137 -176 269 253 72 24 chr17 6098676 6098759 -83405794 + L2 LINE L2 2275 2361 -953 796 234 112 0 chr17 6099503 6099700 -83404853 - MER20 DNA MER1_type 0 219 1 196 300 0 0 chr17 6100468 6100518 -83404035 - MER5A DNA MER1_type -59 130 81 1580 107 37 12 chr17 6100546 6100789 -83403764 - AluSx SINE Alu -17 295 47 347 306 116 16 chr17 6100885 6101006 -83403547 + MIR SINE MIR 18 150 -58 361 335 64 6 chr17 6101077 6101250 -83403303 - MIR SINE MIR 0 262 80 253 281 37 12 chr17 6101867 6101949 -83402604 - MIR SINE MIR -171 91 8 1527 170 22 58 chr17 6101977 6102288 -83402265 + AluJo SINE Alu 3 302 0 1081 132 42 0 chr17 6102505 6102672 -83401881 - AluJ SINE Alu -10 302 129 22 0 0 0 chr17 6102672 6102694 -83401859 + AT_rich Low_complexity Low_complexity 1 22 0 1718 166 0 17 chr17 6102726 6103028 -83401525 - AluJb SINE Alu -3 309 13 819 170 7 27 chr17 6103030 6103177 -83401376 - AluJ SINE Alu -167 145 2 386 305 114 0 chr17 6103182 6103313 -83401240 + MIR SINE MIR 117 262 0 * 607 295 163 18 chr17 6103301 6103528 -83401025 + MIR SINE MIR 1 260 -2 811 219 14 0 chr17 6103742 6103888 -83400665 - MER58B DNA MER1_type 0 341 194 253 234 252 47 chr17 6103901 6104008 -83400545 + L2 LINE L2 3142 3270 -2 2139 96 7 7 chr17 6104080 6104383 -83400170 - AluSx SINE Alu -9 303 1 723 218 0 0 chr17 6105127 6105251 -83399302 - MER63A DNA MER1_type -37 173 50 2212 89 0 10 chr17 6105387 6105689 -83398864 - AluSg SINE Alu -11 299 1 2252 94 0 0 chr17 6105881 6106178 -83398375 - AluSx SINE Alu -10 302 6 189 171 0 0 chr17 6107501 6107536 -83397017 + (TATG)n Simple_repeat Simple_repeat 2 36 0 384 282 26 34 chr17 6108189 6108306 -83396247 - MIR3 SINE MIR -78 130 15 208 240 73 62 chr17 6108420 6108516 -83396037 + L2 LINE L2 2860 2956 -316 2148 101 0 0 chr17 6108633 6108920 -83395633 + AluSx SINE Alu 1 287 -25 2179 112 0 6 chr17 6108930 6109243 -83395310 + AluSq SINE Alu 1 311 -2 1814 155 7 0 chr17 6109952 6110248 -83394305 + AluSx SINE Alu 1 298 -14 869 85 78 0 chr17 6110620 6110749 -83393804 - MER85 DNA T2_type 0 139 1 252 301 92 46 chr17 6112701 6112874 -83391679 + MIR3 SINE MIR 21 201 -7 2369 59 0 0 chr17 6113212 6113501 -83391052 - AluSc SINE Alu -8 301 13 2160 76 0 57 chr17 6114495 6114812 -83389741 + AluSc SINE Alu 1 299 -10 931 177 61 140 chr17 6115106 6115485 -83389068 + L1MB7 LINE L1 4960 5308 -838 1855 92 42 0 chr17 6115489 6115751 -83388802 + AluSg SINE Alu 5 277 -33 1097 211 50 18 chr17 6115765 6116044 -83388509 + L1MB7 LINE L1 5897 6184 0 1591 126 89 0 chr17 6116085 6116356 -83388197 - AluSg SINE Alu -13 297 3 1639 103 63 16 chr17 6118206 6118458 -83386095 + MER21A LTR ERV1 1 264 -667 2959 147 75 10 chr17 6118465 6118983 -83385570 + MER21A LTR ERV1 378 929 -2 1191 191 108 0 chr17 6119254 6119495 -83385058 + MER21B LTR ERV1 292 558 -305 1758 140 24 10 chr17 6120633 6120925 -83383628 - AluSx SINE Alu -1 311 16 518 48 0 0 chr17 6120925 6120988 -83383565 - AluY SINE Alu -247 64 2 225 0 0 0 chr17 6120998 6121023 -83383530 + (T)n Simple_repeat Simple_repeat 1 25 0 187 211 225 0 chr17 6121637 6121708 -83382845 - MIR3 SINE MIR -15 193 107 298 149 15 90 chr17 6121798 6121865 -83382688 + U7 snRNA snRNA 1 62 -1 414 273 77 28 chr17 6122588 6122731 -83381822 - MIR SINE MIR -36 226 77 2476 87 0 0 chr17 6123817 6124126 -83380427 - AluSx SINE Alu -3 309 1 1891 152 0 24 chr17 6124729 6125026 -83379527 - AluSx SINE Alu -22 290 1 197 265 0 0 chr17 6125044 6125093 -83379460 + L2 LINE L2 2997 3045 -227 491 246 16 0 chr17 6125129 6125251 -83379302 + MIR SINE MIR 62 185 -77 191 247 86 37 chr17 6125297 6125378 -83379175 + MIR SINE MIR 178 262 0 1073 83 0 0 chr17 6125983 6126116 -83378437 + AluSq/x SINE Alu 1 133 -179 1961 80 109 11 chr17 6126120 6126395 -83378158 + AluSc SINE Alu 1 302 -7 2232 84 0 52 chr17 6126644 6126975 -83377578 + AluSx SINE Alu 1 315 0 449 214 65 54 chr17 6127073 6127241 -83377312 + L1ME4a LINE L1 5952 6121 0 21 82 0 0 chr17 6127319 6127368 -83377185 + AT_rich Low_complexity Low_complexity 1 49 0 649 192 146 0 chr17 6127700 6127830 -83376723 - FRAM SINE Alu -30 146 1 349 226 88 38 chr17 6128002 6128161 -83376392 + L1ME LINE L1 5210 5376 -770 2194 120 0 16 chr17 6128176 6128484 -83376069 - AluSx SINE Alu -9 303 1 291 267 38 19 chr17 6128546 6128651 -83375902 + MIR SINE MIR 137 243 -19 2158 120 3 0 chr17 6129860 6130152 -83374401 - AluSx SINE Alu -19 293 1 302 252 26 52 chr17 6130556 6130671 -83373882 + L1ME LINE L1 5744 5855 -309 2301 102 3 3 chr17 6131005 6131309 -83373244 + AluSx SINE Alu 1 304 -8 945 151 0 7 chr17 6131322 6131495 -83373058 + AluJb SINE Alu 140 311 0 869 112 77 7 chr17 6132001 6132144 -83372409 + FAM SINE Alu 12 164 -21 438 231 56 0 chr17 6133017 6133125 -83371428 + MER81 DNA DNA 1 114 0 332 283 99 24 chr17 6134244 6134456 -83370097 + MIR SINE MIR 23 250 -12 328 170 0 19 chr17 6135112 6135353 -83369200 + AluJo SINE Alu 1 301 -1 2186 78 0 4 chr17 6135804 6136074 -83368479 + AluSx SINE Alu 33 301 -11 1897 141 57 0 chr17 6136088 6136371 -83368182 + AluSx SINE Alu 1 299 -13 37 81 0 0 chr17 6136383 6136469 -83368084 + AT_rich Low_complexity Low_complexity 1 86 0 296 261 33 11 chr17 6136795 6136887 -83367666 + HAL1 LINE L1 324 417 -2090 242 269 19 39 chr17 6136907 6137011 -83367542 + HAL1 LINE L1 1802 1903 -604 608 230 0 0 chr17 6137214 6137340 -83367213 + FLAM_A SINE Alu 1 126 -7 265 285 78 66 chr17 6137418 6137660 -83366893 + HAL1 LINE L1 2263 2507 0 1760 174 3 7 chr17 6137663 6137950 -83366603 + AluJo SINE Alu 1 286 -26 24 32 0 0 chr17 6137954 6137985 -83366568 + AT_rich Low_complexity Low_complexity 1 31 0 1836 152 24 7 chr17 6138187 6138477 -83366076 - AluJo SINE Alu -17 295 1 930 138 7 22 chr17 6138556 6138694 -83365859 - AluJo SINE Alu -176 136 1 255 219 67 92 chr17 6138696 6138763 -83365790 - MER112 DNA MER1_type -144 116 52 2442 81 0 0 chr17 6138763 6139061 -83365492 - AluY SINE Alu -13 298 1 255 219 67 92 chr17 6139061 6139112 -83365441 - MER112 DNA MER1_type -208 52 1 2406 92 0 0 chr17 6139251 6139554 -83364999 - AluSx SINE Alu -9 303 1 2151 76 42 21 chr17 6140081 6140369 -83364184 + AluY SINE Alu 3 296 -15 1553 92 0 5 chr17 6140390 6140596 -83363957 - AluSx SINE Alu -107 205 1 2542 76 0 0 chr17 6140684 6140987 -83363566 - AluSx SINE Alu -9 303 1 387 261 14 70 chr17 6141309 6141451 -83363102 - L2 LINE L2 0 3272 3139 2142 96 17 14 chr17 6141545 6141837 -83362716 + AluSg SINE Alu 1 293 -17 1821 163 16 3 chr17 6142486 6142793 -83361760 + AluJo SINE Alu 1 311 -1 1794 171 20 0 chr17 6142801 6143099 -83361454 + AluJb SINE Alu 1 304 -8 656 269 29 43 chr17 6143146 6143425 -83361128 + L1ME LINE L1 5478 5752 -369 184 333 51 0 chr17 6144116 6144194 -83360359 + L2 LINE L2 1106 1187 -2127 894 195 32 45 chr17 6144194 6144415 -83360138 - MER46A DNA MER2_type -17 219 2 1435 179 113 31 chr17 6144843 6145162 -83359391 + MER47A DNA MER2_type 20 364 -2 3130 124 0 0 chr17 6145309 6145760 -83358793 + LTR19A-int LTR ERV1 2526 2976 -2039 3072 63 8 0 chr17 6145787 6146166 -83358387 + LTR19A-int LTR ERV1 5205 5586 0 2304 142 28 73 chr17 6146166 6146675 -83357878 + LTR19A LTR ERV1 1 486 0 2486 60 3 10 chr17 6147924 6148238 -83356315 - AluSp SINE Alu -1 312 1 185 176 0 141 chr17 6148370 6148455 -83356098 - MIR SINE MIR -74 188 116 397 246 153 16 chr17 6149310 6149493 -83355060 - Charlie8 DNA MER1_type -2164 253 46 253 246 146 27 chr17 6150026 6150136 -83354417 + LTR11 LTR ERV 345 467 -217 218 209 0 0 chr17 6150389 6150432 -83354121 - L2 LINE L2 -557 2757 2715 225 146 0 0 chr17 6152368 6152416 -83352137 + (A)n Simple_repeat Simple_repeat 1 48 0 927 115 0 23 chr17 6152417 6152547 -83352006 + FLAM_C SINE Alu 1 127 -16 26 50 0 0 chr17 6152547 6152587 -83351966 + AT_rich Low_complexity Low_complexity 1 40 0 287 168 158 42 chr17 6153911 6154006 -83350547 + L1MB3 LINE L1 5694 5799 -384 2377 83 3 3 chr17 6154006 6154306 -83350247 - AluSx SINE Alu -12 300 1 1411 117 10 15 chr17 6154306 6154511 -83350042 + AluSg/x SINE Alu 94 297 -13 1627 100 118 42 chr17 6154511 6154841 -83349712 + L1MB3 LINE L1 5828 6182 -1 327 269 75 6 chr17 6155089 6155249 -83349304 + L1ME LINE L1 5274 5444 -677 2229 114 3 0 chr17 6155250 6155557 -83348996 + AluSx SINE Alu 4 311 -1 1418 203 52 41 chr17 6155853 6156242 -83348311 + L1ME2 LINE L1 5755 6144 -20 1518 197 106 6 chr17 6156473 6156803 -83347750 + L1MC4 LINE L1 6541 6903 -1139 21 0 0 0 chr17 6156807 6156828 -83347725 + AT_rich Low_complexity Low_complexity 1 21 0 1567 166 0 46 chr17 6156831 6157115 -83347438 + AluJo SINE Alu 5 275 -37 591 286 160 6 chr17 6157178 6157503 -83347050 + L1ME LINE L1 5430 5804 -317 1697 180 0 0 chr17 6157579 6157846 -83346707 - AluJb SINE Alu -24 288 22 250 143 0 24 chr17 6157851 6157893 -83346660 - FAM SINE Alu -35 144 104 * 291 145 84 72 chr17 6157879 6157962 -83346591 - FAM SINE Alu -31 144 61 414 113 0 0 chr17 6158203 6158274 -83346279 + Alu SINE Alu 240 310 -1 2178 117 3 0 chr17 6160395 6160694 -83343859 - AluSg SINE Alu -10 300 1 21 57 0 0 chr17 6162076 6162111 -83342442 + AT_rich Low_complexity Low_complexity 1 35 0 710 140 18 0 chr17 6162111 6162225 -83342328 - FLAM_C SINE Alu -26 117 2 201 317 39 29 chr17 6162818 6162922 -83341631 - L2 LINE L2 -240 3032 2928 2295 96 0 3 chr17 6163002 6163295 -83341258 - AluSq SINE Alu -21 292 1 328 316 59 33 chr17 6163605 6163757 -83340796 - MER5B DNA MER1_type -22 156 1 23 0 0 0 chr17 6164966 6164989 -83339564 + GC_rich Low_complexity Low_complexity 1 23 0 681 181 0 0 chr17 6165874 6165979 -83338574 + AluSg/x SINE Alu 146 250 -62 1248 168 0 26 chr17 6165979 6166211 -83338342 + AluJb SINE Alu 85 310 -2 2166 132 3 0 chr17 6166275 6166578 -83337975 - AluSx SINE Alu -8 304 1 1025 266 51 43 chr17 6166578 6166928 -83337625 - MER67C LTR ERV1 -201 509 157 189 308 206 39 chr17 6166954 6167314 -83337239 - L2 LINE L2 -2231 1083 664 1155 170 35 25 chr17 6168625 6168825 -83335728 - AluJo SINE Alu -25 287 86 693 226 242 28 chr17 6169677 6169915 -83334638 + MLT1D LTR MaLR 1 187 -280 2391 92 3 3 chr17 6169915 6170220 -83334333 + AluSx SINE Alu 1 305 -7 693 226 242 28 chr17 6170220 6170372 -83334181 + MLT1D LTR MaLR 187 467 0 1977 142 10 3 chr17 6170998 6171301 -83333252 + AluSx SINE Alu 1 305 -7 869 171 0 49 chr17 6171301 6171451 -83333102 + AluSg/x SINE Alu 132 288 -22 243 0 0 0 chr17 6171451 6171478 -83333075 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1880 156 0 10 chr17 6171478 6171779 -83332774 + AluJb SINE Alu 2 299 -13 869 171 0 49 chr17 6171779 6171791 -83332762 + AluSg/x SINE Alu 286 287 -23 3299 219 104 66 chr17 6171795 6172365 -83332188 + L1M4 LINE L1 3750 4297 -1849 1832 168 0 7 chr17 6172365 6172662 -83331891 - AluJb SINE Alu -17 295 1 3299 219 104 66 chr17 6172662 6172787 -83331766 + L1M4 LINE L1 4297 4416 -1730 264 108 0 0 chr17 6172787 6172824 -83331729 - THE1B LTR MaLR 0 364 328 3299 219 104 66 chr17 6172824 6173053 -83331500 + L1M4 LINE L1 4416 4635 -1511 2223 123 0 22 chr17 6173053 6173371 -83331182 + AluSx SINE Alu 1 311 -1 3299 219 104 66 chr17 6173371 6173885 -83330668 + L1M4 LINE L1 4635 5283 -863 1975 115 25 4 chr17 6173888 6174166 -83330387 + AluSx SINE Alu 2 285 -27 181 0 0 0 chr17 6174166 6174186 -83330367 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1202 179 0 0 chr17 6174186 6174382 -83330171 + AluJb SINE Alu 111 306 -6 618 160 40 8 chr17 6174382 6174507 -83330046 + L1MB8 LINE L1 6049 6177 -1 710 204 119 6 chr17 6174507 6174683 -83329870 + MIR SINE MIR 19 214 -48 258 283 33 0 chr17 6174715 6174775 -83329778 + L2 LINE L2 3157 3218 -54 2196 95 10 23 chr17 6174812 6175117 -83329436 + AluSp SINE Alu 1 301 -12 719 203 8 8 chr17 6175555 6175688 -83328865 - FLAM_A SINE Alu 0 133 1 2113 122 3 7 chr17 6176501 6176795 -83327758 + AluSx SINE Alu 1 293 -19 782 147 0 0 chr17 6176795 6176911 -83327642 + AluSc SINE Alu 132 247 -62 225 94 0 0 chr17 6176912 6176944 -83327609 + (A)n Simple_repeat Simple_repeat 1 32 0 271 276 62 53 chr17 6177509 6177752 -83326801 - L1MEd LINE L1 -4894 1225 981 21 0 0 0 chr17 6177962 6177983 -83326570 + AT_rich Low_complexity Low_complexity 1 21 0 2297 112 0 0 chr17 6178784 6179078 -83325475 + AluSx SINE Alu 1 294 -18 350 287 19 9 chr17 6179114 6179222 -83325331 + MIR SINE MIR 154 262 0 3593 115 32 2 chr17 6179261 6179816 -83324737 + LTR26 LTR ERV1 1 572 -31 393 314 51 22 chr17 6180060 6180197 -83324356 + MIR SINE MIR 51 191 -71 236 291 0 78 chr17 6181531 6181672 -83322881 - LTR16C LTR ERVL -15 476 347 1957 207 27 56 chr17 6181889 6182407 -83322146 + MLT1D LTR MaLR 1 503 -2 387 283 123 65 chr17 6182759 6182880 -83321673 - L2 LINE L2 -15 3298 3186 2380 98 0 0 chr17 6182880 6183176 -83321377 + AluSx SINE Alu 1 296 -16 387 283 123 65 chr17 6183176 6183379 -83321174 - L2 LINE L2 -127 3186 2955 344 307 45 61 chr17 6183679 6183874 -83320679 + MIR SINE MIR 7 198 -61 429 20 0 0 chr17 6184043 6184093 -83320460 + (GA)n Simple_repeat Simple_repeat 1 50 0 602 168 2 6 chr17 6184394 6184506 -83320047 - L1MC3 LINE L1 -2 7783 6230 2436 80 0 3 chr17 6185116 6185417 -83319136 + AluY SINE Alu 1 300 -11 368 269 56 9 chr17 6186075 6186183 -83318370 - MIR SINE MIR -111 151 39 406 291 0 47 chr17 6186454 6186581 -83317972 + MIR3 SINE MIR 10 130 -78 298 248 8 66 chr17 6186591 6186712 -83317841 + MIR SINE MIR 92 205 -57 804 100 0 0 chr17 6187587 6187707 -83316846 + (TTCTC)n Simple_repeat Simple_repeat 4 123 0 2341 81 0 0 chr17 6187707 6187992 -83316561 - AluSq SINE Alu -28 285 1 514 231 84 30 chr17 6188219 6188374 -83316179 - MIR SINE MIR -63 145 7 761 178 7 22 chr17 6189016 6189151 -83315402 - FLAM_C SINE Alu 0 133 1 2129 134 0 3 chr17 6189157 6189455 -83315098 - AluSx SINE Alu -15 297 1 2180 113 23 3 chr17 6189460 6189762 -83314791 - AluSx SINE Alu -4 308 1 319 289 11 11 chr17 6189872 6189962 -83314591 - MIR3 SINE MIR -27 181 92 554 296 47 28 chr17 6190383 6190596 -83313957 - MIR SINE MIR -37 225 9 1295 172 97 0 chr17 6191768 6192036 -83312517 + MLT1D LTR MaLR 1 294 -211 1897 206 28 17 chr17 6192241 6192703 -83311850 + L1M4 LINE L1 4817 5283 -863 1989 112 25 4 chr17 6192706 6193004 -83311549 + AluSx SINE Alu 2 305 0 1202 179 0 0 chr17 6193004 6193200 -83311353 + AluJb SINE Alu 111 306 -6 600 160 40 8 chr17 6193200 6193325 -83311228 + L1MB8 LINE L1 6049 6177 -1 710 204 119 6 chr17 6193325 6193501 -83311052 + MIR SINE MIR 19 214 -48 258 283 33 0 chr17 6193533 6193593 -83310960 + L2 LINE L2 3157 3218 -54 2186 116 0 3 chr17 6193630 6193932 -83310621 + AluSx SINE Alu 1 301 -11 1852 150 56 3 chr17 6193946 6194232 -83310321 + AluSx SINE Alu 1 301 -11 37 81 0 0 chr17 6194244 6194330 -83310223 + AT_rich Low_complexity Low_complexity 1 86 0 279 237 26 13 chr17 6194672 6194748 -83309805 + HAL1 LINE L1 341 417 -2090 397 304 24 60 chr17 6194772 6194940 -83309613 + HAL1 LINE L1 1803 1964 -543 523 332 62 51 chr17 6195024 6195075 -83309478 + HAL1 LINE L1 2131 2180 -327 587 211 8 23 chr17 6195075 6195203 -83309350 + FLAM_A SINE Alu 1 126 -7 523 332 62 51 chr17 6195203 6195524 -83309029 + HAL1 LINE L1 2180 2507 0 1783 190 3 7 chr17 6195527 6195837 -83308716 + AluJo SINE Alu 1 309 -3 1862 152 24 7 chr17 6196050 6196340 -83308213 - AluJo SINE Alu -17 295 1 916 145 7 22 chr17 6196419 6196557 -83307996 - AluJo SINE Alu -176 136 1 229 219 67 92 chr17 6196559 6196626 -83307927 - MER112 DNA MER1_type -144 116 52 2424 80 0 3 chr17 6196626 6196925 -83307628 - AluY SINE Alu -13 298 1 229 219 67 92 chr17 6196925 6196976 -83307577 - MER112 DNA MER1_type -208 52 1 2440 92 0 0 chr17 6197112 6197418 -83307135 - AluSx SINE Alu -6 306 1 27 62 0 0 chr17 6199327 6199375 -83305178 + GC_rich Low_complexity Low_complexity 1 48 0 264 236 33 93 chr17 6200000 6200182 -83304371 - L1ME4a LINE L1 -16 6105 5935 290 143 32 0 chr17 6200796 6200859 -83303694 + L1M4 LINE L1 5498 5562 -612 2144 117 3 7 chr17 6200863 6201162 -83303391 - AluSx SINE Alu -14 298 1 262 233 11 79 chr17 6201524 6201713 -83302840 + (GAATG)n Simple_repeat Simple_repeat 2 177 0 189 0 0 0 chr17 6202709 6202730 -83301823 + (CAG)n Simple_repeat Simple_repeat 2 22 0 429 313 33 7 chr17 6202730 6202880 -83301673 - MIR SINE MIR -12 250 97 2313 104 0 0 chr17 6202909 6203198 -83301355 + AluSx SINE Alu 1 289 -23 294 29 0 0 chr17 6203199 6203234 -83301319 + (AATAG)n Simple_repeat Simple_repeat 4 38 0 189 0 0 0 chr17 6203494 6203515 -83301038 + (TGG)n Simple_repeat Simple_repeat 1 21 0 1959 254 94 34 chr17 6203606 6204245 -83300308 - MER45C DNA AcHobo -275 678 2 2217 117 3 0 chr17 6204574 6204873 -83299680 + AluSq SINE Alu 1 300 -13 2967 162 32 13 chr17 6204968 6205181 -83299372 + L1MB3 LINE L1 5618 5825 -358 2379 88 0 31 chr17 6205181 6205499 -83299054 + AluSq SINE Alu 1 308 -5 2967 162 32 13 chr17 6205499 6205840 -83298713 + L1MB3 LINE L1 5825 6183 0 257 0 30 0 chr17 6205882 6205915 -83298638 + (TTAAA)n Simple_repeat Simple_repeat 2 35 0 2014 140 0 40 chr17 6205984 6206119 -83298434 + AluSx SINE Alu 1 140 -172 2119 104 17 24 chr17 6206119 6206416 -83298137 + AluY SINE Alu 1 295 -16 2403 85 0 0 chr17 6206425 6206720 -83297833 + AluSg SINE Alu 1 295 -15 2014 140 0 40 chr17 6206720 6206895 -83297658 + AluSx SINE Alu 148 308 -4 761 192 8 0 chr17 6206895 6207020 -83297533 - FLAM_C SINE Alu -6 127 2 403 320 78 24 chr17 6207024 6207355 -83297198 + L1ME4a LINE L1 5567 5915 -206 500 143 0 0 chr17 6208149 6208219 -83296334 - AluSq SINE Alu -23 290 221 1054 136 0 19 chr17 6208222 6208376 -83296177 - AluSq SINE Alu -162 151 1 758 153 0 24 chr17 6208633 6208757 -83295796 - FLAM_C SINE Alu -1 142 22 1337 129 35 139 chr17 6208772 6208938 -83295615 - AluJo SINE Alu -17 295 174 2099 120 3 27 chr17 6208938 6209238 -83295315 - AluSx SINE Alu -19 293 1 1337 129 35 139 chr17 6209238 6209381 -83295172 - AluJo SINE Alu -138 174 18 233 310 110 20 chr17 6209387 6209487 -83295066 + L2 LINE L2 3173 3281 -32 * 250 288 158 56 chr17 6209485 6209700 -83294853 - MIR SINE MIR -6 256 20 2416 62 0 32 chr17 6209720 6210028 -83294525 + AluSx SINE Alu 1 298 -14 489 220 23 12 chr17 6210292 6210465 -83294088 + CT-rich Low_complexity Low_complexity 4 178 0 1029 188 6 0 chr17 6211184 6211360 -83293193 + MER45A DNA AcHobo 1 177 -1 767 159 40 0 chr17 6211373 6211499 -83293054 - MER41B LTR ERV1 -375 260 130 441 133 60 114 chr17 6211618 6211784 -83292769 + MER41B-int LTR ERV1 5923 6079 -252 749 195 31 0 chr17 6211834 6211962 -83292591 - FLAM_C SINE Alu 0 133 2 774 238 78 4 chr17 6212067 6212311 -83292242 + MER41B-int LTR ERV1 6412 6673 -3 2301 156 24 10 chr17 6212311 6212721 -83291832 + MER41B LTR ERV1 111 526 -109 26 74 0 0 chr17 6212721 6212775 -83291778 + AT_rich Low_complexity Low_complexity 1 54 0 428 115 16 0 chr17 6212780 6212841 -83291712 - U7 snRNA snRNA 0 63 2 310 220 8 41 chr17 6212841 6212963 -83291590 + MER41A LTR ERV1 404 474 -12 425 195 35 0 chr17 6214217 6214304 -83290249 - MIR3 SINE MIR -6 202 113 226 252 176 75 chr17 6214330 6214489 -83290064 - L3 LINE CR1 -60 1517 1343 644 332 135 42 chr17 6214540 6215131 -83289422 + L3 LINE CR1 733 1378 -199 558 232 73 40 chr17 6215171 6215322 -83289231 - MIR SINE MIR -60 202 47 188 256 78 116 chr17 6215776 6215905 -83288648 + MIR SINE MIR 20 143 -65 2070 126 7 0 chr17 6215962 6216255 -83288298 - AluY SINE Alu -15 296 2 1021 266 94 107 chr17 6216735 6217139 -83287414 + L2 LINE L2 2234 2642 -671 1195 195 172 19 chr17 6217139 6217400 -83287153 - AluJo SINE Alu -1 301 1 2012 128 0 39 chr17 6217409 6217576 -83286977 - AluSx SINE Alu -12 300 149 2466 78 0 0 chr17 6217576 6217872 -83286681 - AluY SINE Alu -15 296 1 2012 128 0 39 chr17 6217872 6218016 -83286537 - AluSx SINE Alu -163 149 1 2209 109 0 7 chr17 6218016 6218318 -83286235 - AluSq SINE Alu -13 300 1 1021 266 94 107 chr17 6218318 6218419 -83286134 + L2 LINE L2 2649 2750 -563 2489 91 3 0 chr17 6218419 6218726 -83285827 - AluSx SINE Alu -4 308 1 1021 266 94 107 chr17 6218726 6218975 -83285578 + L2 LINE L2 2750 2990 -323 969 210 23 14 chr17 6218975 6219194 -83285359 + MER90 LTR ERV1 392 612 -2 2527 84 0 0 chr17 6220387 6220695 -83283858 - AluSq SINE Alu -5 308 1 2232 146 16 14 chr17 6220791 6221155 -83283398 + MLT1A1 LTR MaLR 1 365 0 1090 198 0 0 chr17 6221709 6221886 -83282667 + FRAM SINE Alu 1 176 0 366 158 13 13 chr17 6222075 6222151 -83282402 + LTR67 LTR ERVL 460 535 -22 1779 117 44 0 chr17 6222496 6222744 -83281809 - AluSx SINE Alu -14 298 40 332 267 69 0 chr17 6223230 6223331 -83281222 - MIR SINE MIR -72 136 29 301 247 0 14 chr17 6223412 6223485 -83281068 + MER81 DNA DNA 1 72 -42 384 322 99 13 chr17 6223772 6223924 -83280629 - L2 LINE L2 -6 3266 3102 565 303 160 0 chr17 6224211 6224405 -83280148 + MIR SINE MIR 1 220 -42 2080 137 3 10 chr17 6224550 6224850 -83279703 - AluJb SINE Alu -14 298 1 844 221 35 0 chr17 6225217 6225389 -83279164 + MER45A DNA AcHobo 1 178 0 1627 98 31 9 chr17 6225721 6225946 -83278607 + MER30 DNA MER1_type 1 230 0 311 331 25 43 chr17 6226119 6226282 -83278271 + MIR SINE MIR 103 262 0 469 304 39 68 chr17 6227650 6227936 -83276617 - L1MEc LINE L1 -4923 1387 1109 2423 72 7 0 chr17 6227936 6228241 -83276312 - AluY SINE Alu -4 307 1 469 304 39 68 chr17 6228241 6228263 -83276290 - L1MEc LINE L1 -5201 1109 1088 383 295 65 11 chr17 6228266 6228527 -83276026 - L1MEc LINE L1 -5193 926 652 514 286 80 24 chr17 6228587 6228800 -83275753 + LTR33 LTR ERVL 297 521 0 215 261 43 14 chr17 6229304 6229373 -83275180 - L2 LINE L2 -3 3269 3199 * 667 310 47 5 chr17 6229367 6229580 -83274973 + MIR SINE MIR 5 226 -36 588 12 0 36 chr17 6229716 6229800 -83274753 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 1807 179 0 11 chr17 6229801 6230086 -83274467 - AluJb SINE Alu -30 282 1 286 263 92 0 chr17 6230332 6230408 -83274145 + L2 LINE L2 3153 3235 -37 861 221 55 89 chr17 6230420 6230528 -83274025 + L1MC5 LINE L1 7485 7595 -400 1949 136 0 14 chr17 6230528 6230815 -83273738 + AluSx SINE Alu 1 283 -29 225 65 0 0 chr17 6230815 6230846 -83273707 + (CAAAC)n Simple_repeat Simple_repeat 2 32 0 861 221 55 89 chr17 6230846 6231206 -83273347 + L1MC5 LINE L1 7593 7990 -5 1299 198 55 26 chr17 6231849 6232122 -83272431 + AluJb SINE Alu 1 281 -31 189 0 0 0 chr17 6232122 6232143 -83272410 + (T)n Simple_repeat Simple_repeat 1 21 0 2002 150 3 25 chr17 6232646 6232960 -83271593 + AluJo SINE Alu 1 307 -5 559 347 96 20 chr17 6232977 6233467 -83271086 + L2 LINE L2 2373 2899 -415 * 962 105 18 78 chr17 6233453 6233509 -83271044 - MER5A DNA MER1_type -4 185 127 2418 82 0 0 chr17 6233509 6233801 -83270752 + AluSg SINE Alu 1 292 -18 962 105 18 78 chr17 6233801 6233938 -83270615 - MER5A DNA MER1_type -62 127 5 792 248 174 20 chr17 6233937 6234288 -83270265 + L2 LINE L2 2868 3272 0 * 182 146 0 24 chr17 6234486 6234527 -83270026 + (ATGGTG)n Simple_repeat Simple_repeat 6 45 0 2344 117 0 0 chr17 6234708 6235016 -83269537 - AluSg SINE Alu -2 308 1 1288 124 0 0 chr17 6235016 6235193 -83269360 - AluY SINE Alu -8 303 127 982 236 99 16 chr17 6235613 6235935 -83268618 - LTR16A LTR ERVL -4 446 98 593 284 119 35 chr17 6236900 6237294 -83267259 + L2 LINE L2 2862 3288 -25 246 62 0 0 chr17 6237295 6237327 -83267226 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 25 31 0 0 chr17 6237431 6237463 -83267090 + AT_rich Low_complexity Low_complexity 1 32 0 2066 101 40 4 chr17 6237463 6237740 -83266813 - AluSx SINE Alu -25 287 1 528 200 83 0 chr17 6237758 6237878 -83266675 - MIR SINE MIR -72 190 61 233 167 0 0 chr17 6238475 6238523 -83266030 - Alu SINE Alu -1 165 118 * 352 62 0 0 chr17 6238520 6238568 -83265985 - Alu SINE Alu -255 48 1 676 284 80 12 chr17 6238588 6238912 -83265641 + L1MC4a LINE L1 5591 5936 -1872 395 301 52 39 chr17 6239096 6239249 -83265304 + MIR SINE MIR 6 160 -48 2040 146 0 3 chr17 6239610 6239911 -83264642 - AluSx SINE Alu -7 305 6 189 211 79 0 chr17 6240095 6240133 -83264420 - MIR SINE MIR -77 185 145 786 273 86 49 chr17 6240768 6241284 -83263269 + L2 LINE L2 2702 3231 -82 557 137 16 24 chr17 6241284 6241408 -83263145 + CT-rich Low_complexity Low_complexity 1 123 0 2332 92 0 0 chr17 6241408 6241700 -83262853 - AluSx SINE Alu -20 292 1 354 296 11 11 chr17 6241700 6241788 -83262765 + L2 LINE L2 3226 3313 0 202 291 52 92 chr17 6241904 6242155 -83262398 - L2 LINE L2 -384 2930 2690 652 105 0 0 chr17 6242158 6242244 -83262309 + AluSg/x SINE Alu 212 297 -12 3060 250 99 44 chr17 6242451 6243354 -83261199 + MER45C DNA AcHobo 2 953 0 760 226 0 0 chr17 6243737 6243874 -83260679 + FRAM SINE Alu 5 141 -35 914 111 0 16 chr17 6243893 6244136 -83260417 + (CA)n Simple_repeat Simple_repeat 1 239 0 409 337 50 42 chr17 6244639 6244889 -83259664 + MIR SINE MIR 3 253 -9 600 214 16 8 chr17 6245201 6245376 -83259177 + L1MA9 LINE L1 5874 6056 -244 265 203 72 0 chr17 6245590 6245659 -83258894 + MIR SINE MIR 49 122 -86 215 143 0 120 chr17 6245677 6245810 -83258743 + (CATA)n Simple_repeat Simple_repeat 3 119 0 319 393 62 5 chr17 6245822 6246033 -83258520 - MIR SINE MIR -9 253 31 1228 319 162 30 chr17 6246444 6247476 -83257077 + L2 LINE L2 959 2126 -1188 6146 212 44 66 chr17 6247518 6247848 -83256705 - L1M4 LINE L1 -1495 4651 4315 1916 155 3 7 chr17 6247848 6248151 -83256402 - AluJb SINE Alu -10 302 1 6146 212 44 66 chr17 6248151 6249424 -83255129 - L1M4 LINE L1 -1831 4315 3015 5176 138 26 20 chr17 6249424 6250328 -83254225 - L1MC1 LINE L1 0 6333 5424 6146 212 44 66 chr17 6250328 6250349 -83254204 - L1M4 LINE L1 -3131 3015 2995 1598 203 3 20 chr17 6250349 6250644 -83253909 - AluJo SINE Alu -22 290 1 6146 212 44 66 chr17 6250644 6250977 -83253576 - L1M4 LINE L1 -3151 2995 2736 1085 300 67 81 chr17 6251012 6251785 -83252768 + L2 LINE L2 2294 3051 -221 242 283 103 48 chr17 6252327 6252472 -83252081 + L2 LINE L2 3120 3272 -41 34 42 0 0 chr17 6252497 6252545 -83252008 + AT_rich Low_complexity Low_complexity 1 48 0 1625 178 7 4 chr17 6253309 6253584 -83250969 + AluJo SINE Alu 1 276 -36 351 0 0 0 chr17 6253587 6253626 -83250927 + (CA)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr17 6253753 6253774 -83250779 + AT_rich Low_complexity Low_complexity 1 21 0 349 316 15 7 chr17 6254239 6254375 -83250178 + L1ME4a LINE L1 5712 5848 -273 1982 121 4 4 chr17 6254385 6254658 -83249895 + AluSx SINE Alu 6 278 -34 192 40 0 0 chr17 6254658 6254683 -83249870 + (TCTCTG)n Simple_repeat Simple_repeat 4 28 0 423 0 0 0 chr17 6254685 6254732 -83249821 + (CA)n Simple_repeat Simple_repeat 2 48 0 1819 184 0 13 chr17 6254737 6255053 -83249500 + AluJb SINE Alu 1 312 0 1929 98 11 11 chr17 6255196 6255462 -83249091 - AluSq SINE Alu -15 298 33 314 115 0 0 chr17 6255913 6255974 -83248579 - AluJo SINE Alu -1 301 241 966 194 0 22 chr17 6255974 6256154 -83248399 - AluJo SINE Alu -136 176 1 445 276 104 27 chr17 6256810 6257031 -83247522 - MIR SINE MIR -12 250 13 462 231 56 0 chr17 6258146 6258254 -83246299 - MER81 DNA DNA 0 114 1 2093 95 14 11 chr17 6258998 6259282 -83245271 - AluSq SINE Alu -28 285 1 1989 156 0 7 chr17 6259356 6259664 -83244889 - AluSx SINE Alu -6 306 1 242 259 179 9 chr17 6259877 6259989 -83244564 + L2 LINE L2 3179 3309 -4 533 218 9 9 chr17 6262617 6262727 -83241826 - L2 LINE L2 -5 3308 3199 264 203 177 0 chr17 6262706 6262785 -83241768 + MIR SINE MIR 60 152 -56 * 503 277 100 4 chr17 6263001 6263232 -83241321 + LTR16C LTR ERVL 238 490 -1 2283 108 7 0 chr17 6263407 6263714 -83240839 - AluSq SINE Alu -4 309 1 2739 14 0 0 chr17 6263806 6264101 -83240452 - AluYb8 SINE Alu -23 295 1 312 281 16 16 chr17 6264931 6265052 -83239501 + L1PA12 LINE L1 2182 2302 -5279 5320 200 15 17 chr17 6265090 6266386 -83238167 + L1PA15 LINE L1 1231 2522 -4275 29 0 0 0 chr17 6266391 6266420 -83238133 + AT_rich Low_complexity Low_complexity 1 29 0 6456 124 30 2 chr17 6266420 6267084 -83237469 - L1MA1 LINE L1 -4 7717 7073 2515 90 0 0 chr17 6267084 6267395 -83237158 - AluY SINE Alu 0 311 1 6456 124 30 2 chr17 6267395 6268008 -83236545 - L1MA1 LINE L1 -648 7073 6403 * 11452 139 34 13 chr17 6267999 6271353 -83233200 - L1MA1 LINE L1 -2457 5108 1684 * 12471 220 84 12 chr17 6271352 6274567 -83229986 + L1PA15 LINE L1 2507 5984 -832 1975 136 31 3 chr17 6274567 6274861 -83229692 + AluSx SINE Alu 1 302 -10 12471 220 84 12 chr17 6274861 6274963 -83229590 + L1PA15 LINE L1 5984 6077 -739 40822 55 6 3 chr17 6274964 6276789 -83227764 + L1PA5 LINE L1 2 1820 -4334 2416 88 0 10 chr17 6276789 6277094 -83227459 - AluY SINE Alu -8 303 2 40822 55 6 3 chr17 6277094 6281401 -83223152 + L1PA5 LINE L1 1820 6152 -2 336 223 0 8 chr17 6281401 6281492 -83223061 + MLT2B1 LTR ERVL 132 220 -177 4039 134 41 61 chr17 6281492 6282083 -83222470 + L1PA15 LINE L1 6064 6638 -178 2282 103 0 6 chr17 6282083 6282394 -83222159 + AluY SINE Alu 1 309 -2 4039 134 41 61 chr17 6282394 6282557 -83221996 + L1PA15 LINE L1 6638 6803 -13 287 146 0 0 chr17 6283066 6283121 -83221432 - L1PA16 LINE L1 -6 6160 6106 371 333 133 36 chr17 6283392 6283617 -83220936 + MIR SINE MIR 9 255 -7 193 218 18 18 chr17 6283662 6283717 -83220836 - MIR3 SINE MIR -144 64 10 183 238 200 25 chr17 6285176 6285256 -83219297 + MIR SINE MIR 33 126 -82 219 69 0 0 chr17 6285311 6285340 -83219213 + (CAG)n Simple_repeat Simple_repeat 1 29 0 713 266 119 5 chr17 6285352 6285570 -83218983 - MIR SINE MIR -13 249 7 204 224 0 20 chr17 6287409 6287458 -83217095 + MIR SINE MIR 104 145 -63 1633 117 51 40 chr17 6287495 6287768 -83216785 - AluSx SINE Alu -36 276 1 1422 249 56 56 chr17 6287952 6288502 -83216051 - MER21B LTR ERV1 -75 788 239 856 261 32 12 chr17 6288505 6288754 -83215799 + L2 LINE L2 2531 2784 -530 859 155 0 8 chr17 6288761 6288890 -83215663 + FLAM_C SINE Alu 6 133 -10 1920 119 25 21 chr17 6288904 6289189 -83215364 + AluSq SINE Alu 1 286 -27 216 0 0 0 chr17 6289202 6289226 -83215327 + (CAA)n Simple_repeat Simple_repeat 2 25 0 841 280 217 18 chr17 6289238 6289673 -83214880 + L2 LINE L2 2776 3295 -18 1915 203 48 42 chr17 6290727 6291229 -83213324 - LTR10B LTR ERV1 0 505 1 202 194 0 0 chr17 6291372 6291408 -83213145 + CT-rich Low_complexity Low_complexity 3 38 0 811 218 82 33 chr17 6291753 6291930 -83212623 - L1MD3 LINE L1 0 8042 7855 2055 129 3 28 chr17 6291930 6292247 -83212306 - AluSx SINE Alu -3 309 1 811 218 82 33 chr17 6292247 6292374 -83212179 - L1MD3 LINE L1 -187 7855 7736 453 316 16 61 chr17 6292597 6292930 -83211623 - L1MC4a LINE L1 -330 5912 5591 204 40 0 0 chr17 6293262 6293287 -83211266 + (TCCCC)n Simple_repeat Simple_repeat 3 27 0 2129 113 29 26 chr17 6293287 6293597 -83210956 - AluSx SINE Alu -1 311 1 250 291 47 12 chr17 6293678 6293764 -83210789 - MIR SINE MIR -48 214 126 490 284 41 50 chr17 6294024 6294242 -83210311 + L3b LINE CR1 1273 1488 -95 1706 169 7 36 chr17 6294589 6294890 -83209663 - AluJb SINE Alu -20 292 1 2389 82 0 0 chr17 6294951 6295245 -83209308 - AluSc SINE Alu -15 294 1 324 347 0 40 chr17 6295382 6295506 -83209047 + L2 LINE L2 3154 3272 0 286 282 59 0 chr17 6295920 6296005 -83208548 + L2 LINE L2 3204 3293 -20 223 335 52 31 chr17 6296754 6296945 -83207608 + L2 LINE L2 2563 2757 -557 563 341 90 34 chr17 6296987 6297398 -83207155 + L2 LINE L2 2831 3264 -8 814 252 113 76 chr17 6297588 6298076 -83206477 + LTR33A LTR ERVL 10 515 -8 2513 91 0 0 chr17 6298962 6299270 -83205283 - AluSg SINE Alu -2 308 1 382 273 89 99 chr17 6299378 6299792 -83204761 - L2 LINE L2 -18 3254 2845 420 266 75 44 chr17 6301260 6301451 -83203102 - MIR SINE MIR -67 141 3 21 0 0 0 chr17 6301581 6301602 -83202951 + AT_rich Low_complexity Low_complexity 1 21 0 803 245 135 5 chr17 6301729 6301937 -83202616 + MIR SINE MIR 28 262 0 365 296 106 30 chr17 6301949 6302148 -83202405 - L1ME1 LINE L1 -231 5935 5722 2405 87 3 7 chr17 6302472 6302781 -83201772 + AluSg SINE Alu 1 308 -2 588 205 111 8 chr17 6302877 6302994 -83201559 - MIR SINE MIR -71 191 63 228 35 0 0 chr17 6303403 6303432 -83201121 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 254 239 43 123 chr17 6303765 6303928 -83200625 + L2 LINE L2 2935 3084 -188 335 355 8 0 chr17 6304209 6304330 -83200223 + L3 LINE CR1 695 816 -761 314 233 35 35 chr17 6304510 6304596 -83199957 + L2 LINE L2 3228 3313 0 2050 96 46 7 chr17 6304648 6304930 -83199623 - AluSq SINE Alu -20 293 1 266 324 185 0 chr17 6305117 6305225 -83199328 + L2 LINE L2 3143 3270 -2 2184 105 0 0 chr17 6305393 6305669 -83198884 - AluSx SINE Alu -36 276 1 188 316 161 19 chr17 6305785 6305940 -83198613 - L2 LINE L2 -2474 840 664 455 291 8 0 chr17 6306498 6306632 -83197921 - MLT1L LTR MaLR -5 610 476 311 279 36 18 chr17 6306782 6306893 -83197660 - MLT1L LTR MaLR -322 293 181 225 186 0 0 chr17 6306943 6306986 -83197567 - MLT1L LTR MaLR -431 184 142 2258 124 3 0 chr17 6307041 6307347 -83197206 - AluSx SINE Alu -5 307 1 549 209 51 19 chr17 6307347 6307505 -83197048 - MLT1H LTR MaLR -4 545 383 1936 160 3 22 chr17 6307742 6308055 -83196498 + AluJb SINE Alu 1 307 -5 306 252 66 18 chr17 6308374 6308499 -83196054 - MIR SINE MIR -47 161 33 195 250 75 25 chr17 6308656 6308736 -83195817 + L2 LINE L2 3191 3274 -39 416 368 16 11 chr17 6308785 6308975 -83195578 - MIR SINE MIR -70 192 2 2427 90 3 0 chr17 6309120 6309421 -83195132 - AluSp SINE Alu -11 302 1 477 248 58 82 chr17 6309426 6309470 -83195083 - MIR SINE MIR -49 213 169 1774 181 0 10 chr17 6309470 6309769 -83194784 + AluJo SINE Alu 1 296 -16 477 248 58 82 chr17 6309769 6309930 -83194623 - MIR SINE MIR -93 169 13 792 240 18 98 chr17 6311118 6311393 -83193160 - MIR SINE MIR -2 260 8 357 343 45 0 chr17 6311725 6311859 -83192694 + MIR3 SINE MIR 48 187 -21 390 292 171 31 chr17 6362087 6362443 -83142110 - L2 LINE L2 -6 3266 2861 339 283 297 0 chr17 6362452 6362590 -83141963 + MIR SINE MIR 48 226 -36 425 298 54 54 chr17 6363215 6363564 -83140989 - L2 LINE L2 -94 3178 2830 313 314 29 0 chr17 6363632 6363734 -83140819 + MIR SINE MIR 36 140 -68 760 285 170 16 chr17 6363766 6364078 -83140475 - L2 LINE L2 0 3313 2954 411 259 61 27 chr17 6364092 6364239 -83140314 - MIR SINE MIR -27 235 84 258 105 0 0 chr17 6364470 6364508 -83140045 + (TCTCCC)n Simple_repeat Simple_repeat 2 39 0 1968 134 25 0 chr17 6364508 6364792 -83139761 - AluJo SINE Alu -21 291 1 351 288 34 68 chr17 6364904 6365050 -83139503 - L1ME4a LINE L1 -14 6107 5967 329 131 321 36 chr17 6365160 6365244 -83139309 + AluJb SINE Alu 1 108 -194 198 264 94 0 chr17 6365653 6365706 -83138847 - MIR SINE MIR -99 163 106 775 261 61 8 chr17 6366798 6367043 -83137510 - MIR SINE MIR 0 262 5 1919 127 22 120 chr17 6367081 6367497 -83137056 + THE1C LTR MaLR 1 375 0 218 281 101 96 chr17 6368556 6368734 -83135819 + L3 LINE CR1 274 452 -1125 232 283 81 40 chr17 6368761 6368860 -83135693 - MIR SINE MIR -82 180 78 418 319 161 14 chr17 6368931 6369223 -83135330 + L3 LINE CR1 427 761 -816 199 188 0 0 chr17 6369268 6369300 -83135253 + MIR SINE MIR 76 107 -155 571 290 53 0 chr17 6369424 6369593 -83134960 + MIR SINE MIR 6 183 -79 696 306 107 31 chr17 6369746 6369858 -83134695 + L2 LINE L2 2722 2824 -489 5158 74 8 46 chr17 6369858 6370576 -83133977 + LTR8 LTR ERV1 1 691 0 696 306 107 31 chr17 6370576 6371015 -83133538 + L2 LINE L2 2824 3313 0 302 243 36 45 chr17 6372833 6372944 -83131609 - MIR SINE MIR -127 135 26 479 258 61 32 chr17 6373450 6373888 -83130665 + L1ME4a LINE L1 5562 6041 -80 1119 216 98 53 chr17 6374072 6374451 -83130102 + MSTD LTR MaLR 1 396 0 301 253 0 13 chr17 6375251 6375330 -83129223 + MER102a DNA MER1_type 249 326 -4 367 261 0 63 chr17 6375804 6375915 -83128638 - MIR SINE MIR -88 120 17 584 237 72 20 chr17 6376267 6376419 -83128134 + MIR SINE MIR 28 187 -75 202 122 122 0 chr17 6376547 6376588 -83127965 + MIR SINE MIR 176 221 -41 2189 105 0 3 chr17 6378738 6379024 -83125529 + AluSx SINE Alu 21 305 -7 328 277 109 25 chr17 6379665 6379784 -83124769 + MLT1I LTR MaLR 18 146 -263 369 211 58 19 chr17 6379943 6380047 -83124506 + MLT1G LTR MaLR 483 590 0 528 254 187 13 chr17 6380086 6380252 -83124301 - L1MC4a LINE L1 -552 5569 5622 1382 129 35 22 chr17 6380252 6380484 -83124069 - MER46A DNA MER2_type -1 235 1 528 254 187 13 chr17 6380484 6380627 -83123926 - L1MC4a LINE L1 -498 5623 5506 1016 238 75 42 chr17 6380729 6381005 -83123548 - MER113 DNA MER1_type? 0 521 227 1531 142 32 21 chr17 6381005 6381287 -83123266 - L1MA8 LINE L1 -1 6290 6006 1016 238 75 42 chr17 6381287 6381410 -83123143 - MER113 DNA MER1_type? -294 227 109 1944 210 83 19 chr17 6381431 6381685 -83122868 - L1MC4a LINE L1 0 7808 7572 2188 106 143 13 chr17 6381685 6382064 -83122489 + MSTA LTR MaLR 1 428 0 1944 210 83 19 chr17 6382064 6382276 -83122277 - L1MC4a LINE L1 -236 7572 7312 323 266 0 21 chr17 6383340 6383434 -83121119 - L2 LINE L2 -34 3279 3188 386 117 17 0 chr17 6383853 6383913 -83120640 - MSTB LTR MaLR 0 432 372 1339 112 32 5 chr17 6383913 6384101 -83120452 + AluSq SINE Alu 99 291 -22 1869 188 42 6 chr17 6384101 6384462 -83120091 - MSTB LTR MaLR -52 374 1 382 312 30 21 chr17 6384731 6384994 -83119559 + MLT1J2 LTR MaLR 109 435 -15 241 196 18 0 chr17 6385263 6385319 -83119234 - MIR SINE MIR -64 198 142 1151 179 0 28 chr17 6385327 6385539 -83119014 - AluJo SINE Alu -20 292 87 297 0 0 0 chr17 6385543 6385576 -83118977 + (TC)n Simple_repeat Simple_repeat 2 34 0 360 245 189 0 chr17 6385576 6385682 -83118871 - MIR SINE MIR -123 139 14 1027 268 97 76 chr17 6386407 6386771 -83117782 - MLT1G3 LTR MaLR -17 513 177 2261 110 0 0 chr17 6386771 6387079 -83117474 + AluSq SINE Alu 1 308 -5 1027 268 97 76 chr17 6387079 6387260 -83117293 - MLT1G3 LTR MaLR -353 177 1 288 261 31 39 chr17 6387359 6387489 -83117064 - LTR67 LTR ERVL 0 557 429 703 283 11 0 chr17 6387636 6387827 -83116726 + MIR SINE MIR 65 257 -5 2139 117 3 0 chr17 6387888 6388170 -83116383 - AluSx SINE Alu -25 287 5 196 203 85 51 chr17 6388206 6388265 -83116288 + L2 LINE L2 3211 3271 -1 2231 100 37 7 chr17 6388330 6388630 -83115923 - AluSp SINE Alu -4 309 1 1959 120 33 10 chr17 6388723 6388744 -83115809 - AluSq SINE Alu -6 307 288 1007 111 11 17 chr17 6388744 6388925 -83115628 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1959 120 33 10 chr17 6388925 6389203 -83115350 - AluSq SINE Alu -25 288 1 2221 96 28 0 chr17 6391010 6391301 -83113252 + AluSc SINE Alu 1 299 -10 714 289 25 0 chr17 6391312 6391516 -83113037 - MIR SINE MIR -2 260 52 565 317 41 27 chr17 6391730 6391951 -83112602 - MIR SINE MIR -12 250 27 213 43 0 65 chr17 6391955 6392001 -83112552 + (TTTTC)n Simple_repeat Simple_repeat 4 46 0 2389 99 0 6 chr17 6392003 6392316 -83112237 - AluSq SINE Alu 0 313 3 5561 42 12 9 chr17 6392340 6393442 -83111111 - SVA Other Other -954 1386 5 224 0 0 111 chr17 6393446 6393509 -83111044 + (GGGAGA)n Simple_repeat Simple_repeat 6 61 0 235 326 117 13 chr17 6393720 6393959 -83110594 + L2 LINE L2 2155 2418 -896 420 289 29 40 chr17 6394199 6394372 -83110181 + MIR SINE MIR 84 254 -8 225 328 134 0 chr17 6394392 6394511 -83110042 + L2 LINE L2 2713 2847 -467 311 158 0 0 chr17 6394582 6394639 -83109914 - L1MA8 LINE L1 -26 6265 6209 6412 233 82 30 chr17 6394679 6394714 -83109839 + L1MEc LINE L1 234 266 -5949 1512 186 53 42 chr17 6394714 6395075 -83109478 - MLT1A1 LTR MaLR 0 365 1 6412 233 82 30 chr17 6395075 6397447 -83107106 + L1MEc LINE L1 266 2720 -3495 9041 92 14 9 chr17 6397464 6398673 -83105880 + HSMAR1 DNA Mariner 9 1223 -64 7332 155 9 13 chr17 6398673 6398715 -83105838 + L1PB1 LINE L1 3796 3837 -2314 2904 88 6 135 chr17 6398715 6399235 -83105318 + MLT2A2 LTR ERVL 1 453 0 7332 155 9 13 chr17 6399235 6401553 -83103000 + L1PB1 LINE L1 3837 6150 -1 586 89 0 0 chr17 6401560 6401639 -83102914 + HSMAR1 DNA Mariner 1208 1286 -1 2250 98 0 55 chr17 6403306 6403633 -83100920 + AluSg SINE Alu 1 309 -1 219 280 0 0 chr17 6404154 6404204 -83100349 + CT-rich Low_complexity Low_complexity 3 52 0 2366 95 0 3 chr17 6405571 6405877 -83098676 + AluY SINE Alu 4 308 -3 2825 75 5 3 chr17 6406322 6406698 -83097855 + L1PA8 LINE L1 5796 6172 0 2396 167 50 27 chr17 6406739 6407224 -83097329 + L1MB3 LINE L1 5688 6183 0 612 251 167 35 chr17 6407487 6407798 -83096755 - MLT1J LTR MaLR -43 468 117 234 208 0 19 chr17 6407823 6407876 -83096677 - MLT1L LTR MaLR -543 72 21 414 256 55 97 chr17 6407912 6408149 -83096404 + HAL1 LINE L1 1254 1466 -1041 2581 84 0 0 chr17 6408149 6408459 -83096094 + AluSx SINE Alu 1 310 -2 414 256 55 97 chr17 6408459 6408655 -83095898 + HAL1 LINE L1 1466 1669 -838 1579 221 42 32 chr17 6408830 6409008 -83095545 - L1M4 LINE L1 -824 5322 5147 2466 56 0 37 chr17 6409008 6409329 -83095224 - AluY SINE Alu -2 309 1 1579 221 42 32 chr17 6409329 6409584 -83094969 - L1M4 LINE L1 -999 5147 4885 213 313 0 0 chr17 6409933 6410000 -83094553 + T-rich Low_complexity Low_complexity 1 67 0 2359 101 0 0 chr17 6410241 6410539 -83094014 + AluSx SINE Alu 1 298 -14 893 145 7 14 chr17 6410674 6410819 -83093734 + AluJo SINE Alu 88 231 -81 186 143 0 0 chr17 6410821 6410856 -83093697 + (A)n Simple_repeat Simple_repeat 1 35 0 578 321 86 45 chr17 6410962 6411187 -83093366 + L1MEc LINE L1 2152 2366 -3849 2027 131 0 39 chr17 6411187 6411499 -83093054 + AluSg SINE Alu 3 302 -8 578 321 86 45 chr17 6411499 6411742 -83092811 + L1MEc LINE L1 2366 2599 -3616 246 270 63 46 chr17 6412122 6412296 -83092257 + L1MEc LINE L1 2942 3118 -3097 396 322 7 20 chr17 6412534 6412683 -83091870 + MER5B DNA MER1_type 1 147 -31 524 293 104 30 chr17 6412700 6413257 -83091296 + L1M4 LINE L1 4131 4752 -1394 2084 150 3 15 chr17 6413257 6413598 -83090955 - MER1B DNA MER1_type 0 337 1 524 293 104 30 chr17 6413598 6413742 -83090811 + L1M4 LINE L1 4752 4884 -1262 780 268 91 78 chr17 6413762 6414259 -83090294 - MLT1J LTR MaLR 0 511 9 604 126 84 8 chr17 6414570 6414689 -83089864 + MER53 DNA DNA 1 128 -61 447 19 0 0 chr17 6414692 6414744 -83089809 + (CATA)n Simple_repeat Simple_repeat 3 54 0 6255 56 13 0 chr17 6415468 6416238 -83088315 - L1PA8A LINE L1 -28 6103 5324 2028 134 16 7 chr17 6417492 6417799 -83086754 - AluSg SINE Alu 0 310 1 312 244 81 81 chr17 6418184 6418231 -83086322 + L2 LINE L2 3117 3163 -150 2118 112 3 7 chr17 6418231 6418541 -83086012 - AluSx SINE Alu 0 309 1 312 244 81 81 chr17 6418541 6418689 -83085864 + L2 LINE L2 3162 3313 0 730 318 39 33 chr17 6418755 6419092 -83085461 - MLT1I LTR MaLR 0 409 71 658 147 104 61 chr17 6419354 6419373 -83085180 + MER21A LTR ERV1 6 23 -908 365 0 22 0 chr17 6419373 6419418 -83085135 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 658 147 104 61 chr17 6419418 6419561 -83084992 + MER21A LTR ERV1 23 175 -756 * 2200 161 116 9 chr17 6419550 6419990 -83084563 + MER21B LTR ERV1 377 863 0 1995 106 0 15 chr17 6420251 6420524 -83084029 - AluSx SINE Alu -43 269 1 2215 110 3 49 chr17 6420861 6421188 -83083365 + AluSx SINE Alu 1 312 0 1293 171 38 46 chr17 6421581 6421844 -83082709 - AluJo SINE Alu -10 302 42 330 338 30 0 chr17 6422410 6422543 -83082010 - L3 LINE CR1 -1 1576 1440 450 301 12 18 chr17 6422566 6422729 -83081824 + MIR SINE MIR 90 251 -11 1311 105 6 0 chr17 6422856 6423027 -83081526 - AluSp SINE Alu -8 305 134 2449 89 0 10 chr17 6423027 6423341 -83081212 - AluSx SINE Alu -1 311 1 22 70 0 0 chr17 6423957 6424000 -83080553 + AT_rich Low_complexity Low_complexity 1 43 0 2314 80 0 48 chr17 6424337 6424651 -83079902 - AluSx SINE Alu -13 299 1 337 284 7 47 chr17 6424651 6424788 -83079765 + CT-rich Low_complexity Low_complexity 13 145 0 185 260 13 0 chr17 6424958 6425035 -83079518 + C-rich Low_complexity Low_complexity 4 81 0 290 274 32 19 chr17 6425045 6425202 -83079351 + (TCTCTG)n Simple_repeat Simple_repeat 3 161 0 180 111 0 0 chr17 6425213 6425240 -83079313 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 1344 219 61 32 chr17 6426535 6427192 -83077361 - L1MD1 LINE L1 0 7995 7358 2182 114 3 0 chr17 6427192 6427490 -83077063 - AluSx SINE Alu -13 299 1 1344 219 61 32 chr17 6427490 6427706 -83076847 - L1MD1 LINE L1 -637 7358 6079 318 50 0 0 chr17 6427732 6427772 -83076781 + (TA)n Simple_repeat Simple_repeat 1 40 0 467 259 121 30 chr17 6428223 6428455 -83076098 + MLT1K LTR MaLR 329 581 -7 400 250 125 60 chr17 6428607 6428775 -83075778 + MIR SINE MIR 28 206 -56 1069 210 0 14 chr17 6429399 6429618 -83074935 - MER20 DNA MER1_type 0 219 4 609 266 27 23 chr17 6429623 6429812 -83074741 + MIR SINE MIR 1 197 -63 476 186 29 10 chr17 6429866 6429968 -83074585 + L2 LINE L2 3151 3254 -18 2545 77 3 0 chr17 6430578 6430889 -83073664 + AluSx SINE Alu 1 312 0 710 174 45 50 chr17 6431447 6431648 -83072905 + LTR45 LTR ERV1 326 525 0 331 346 78 7 chr17 6431798 6431951 -83072602 + L2 LINE L2 2562 2725 -589 365 314 129 16 chr17 6431974 6432292 -83072261 + L1ME4a LINE L1 5697 6050 -71 2287 95 7 3 chr17 6432443 6432737 -83071816 - AluSg SINE Alu -15 295 1 970 221 101 4 chr17 6432779 6433055 -83071498 - LTR16C LTR ERVL 0 491 189 2173 96 34 10 chr17 6433190 6433483 -83071070 + AluSx SINE Alu 1 300 -12 213 303 81 0 chr17 6433503 6433602 -83070951 + MIR SINE MIR 86 192 -70 324 0 0 0 chr17 6433606 6433642 -83070911 + (TG)n Simple_repeat Simple_repeat 2 37 0 379 141 13 51 chr17 6433644 6433722 -83070831 + MLT1A2 LTR MaLR 4 78 -296 1064 170 5 25 chr17 6433739 6433939 -83070614 + MLT1A2 LTR MaLR 179 374 0 699 186 9 0 chr17 6434385 6434498 -83070055 - MER81 DNA DNA 0 114 1 546 273 142 24 chr17 6436201 6436490 -83068063 + MLT1K LTR MaLR 17 339 -249 2067 127 0 3 chr17 6436949 6437264 -83067289 - AluSg SINE Alu 0 314 1 264 291 22 15 chr17 6438182 6438316 -83066237 + (TGGA)n Simple_repeat Simple_repeat 1 135 0 2323 96 3 0 chr17 6439487 6439779 -83064774 - AluSc SINE Alu -16 293 1 901 219 29 15 chr17 6439794 6439825 -83064728 - L1MA1 LINE L1 -380 5800 5771 1774 202 16 26 chr17 6439825 6440202 -83064351 - L1MB5 LINE L1 -8 6166 5794 4883 33 0 3 chr17 6440203 6440779 -83063774 + L1PA8 LINE L1 5594 6167 -5 901 219 29 15 chr17 6440779 6440995 -83063558 - L1MA1 LINE L1 -408 5772 5582 401 342 58 52 chr17 6440998 6441346 -83063207 + L2 LINE L2 2879 3228 -44 220 218 23 0 chr17 6441854 6441941 -83062612 + GA-rich Low_complexity Low_complexity 1 89 0 261 277 26 26 chr17 6442047 6442202 -83062351 + (CAGAGA)n Simple_repeat Simple_repeat 6 160 0 466 283 50 13 chr17 6442326 6442485 -83062068 - MIR SINE MIR -81 181 17 5996 146 105 89 chr17 6442559 6444228 -83060325 + pTR5 LTR ERV1 743 2438 0 2163 99 0 55 chr17 6444700 6445012 -83059541 + AluSc SINE Alu 6 300 -9 419 185 260 27 chr17 6445098 6445244 -83059309 + L2 LINE L2 3134 3313 0 205 319 104 0 chr17 6445375 6445510 -83059043 - L2 LINE L2 -560 2754 2606 361 133 0 80 chr17 6446067 6446180 -83058373 + (CCCCCA)n Simple_repeat Simple_repeat 2 105 0 347 310 161 35 chr17 6446609 6446957 -83057596 + L2 LINE L2 2873 3264 -8 252 246 35 70 chr17 6446971 6447085 -83057468 + MIR SINE MIR 29 138 -70 1017 259 17 4 chr17 6447160 6447399 -83057154 - MIR SINE MIR -10 252 11 626 246 191 5 chr17 6447422 6447621 -83056932 - MIR SINE MIR -7 255 20 252 402 0 9 chr17 6447639 6447746 -83056807 - MIR3 SINE MIR -54 154 49 629 253 69 35 chr17 6447885 6448207 -83056346 - MLT1H LTR MaLR -235 336 14 2371 94 7 0 chr17 6448217 6448516 -83056037 + AluSx SINE Alu 1 301 -11 2137 150 36 85 chr17 6449334 6449922 -83054631 + L1MB3 LINE L1 5625 6183 0 2402 98 0 3 chr17 6450619 6450924 -83053629 + AluSq SINE Alu 2 305 -8 182 333 65 36 chr17 6451251 6451352 -83053201 - MIR SINE MIR -23 239 131 2130 119 0 13 chr17 6451352 6451655 -83052898 + AluSx SINE Alu 1 299 -13 182 333 65 36 chr17 6451655 6451691 -83052862 - MIR SINE MIR -131 131 98 264 323 58 35 chr17 6451776 6452002 -83052551 - L2 LINE L2 -533 2781 2551 260 213 38 12 chr17 6452447 6452527 -83052026 + GA-rich Low_complexity Low_complexity 3 84 0 204 294 0 74 chr17 6453187 6453350 -83051203 + G-rich Low_complexity Low_complexity 12 162 0 344 333 108 5 chr17 6453554 6453740 -83050813 - MIR SINE MIR 0 262 58 2223 95 4 0 chr17 6453970 6454243 -83050310 - AluSx SINE Alu -38 274 1 796 191 114 64 chr17 6454516 6454736 -83049817 - MLT1D LTR MaLR 0 505 275 2556 206 36 10 chr17 6454819 6455405 -83049148 - MLT1H-int LTR MaLR -770 601 1 1736 217 2 42 chr17 6455407 6455817 -83048736 - MLT2C1 LTR ERVL -2 395 2 293 194 108 21 chr17 6456057 6456150 -83048403 - MLT1H LTR MaLR -13 536 436 439 282 161 10 chr17 6458525 6458802 -83045751 + MIR SINE MIR 4 252 -10 198 103 0 0 chr17 6458812 6458841 -83045712 + (CAT)n Simple_repeat Simple_repeat 2 30 0 31 44 0 0 chr17 6459032 6459077 -83045476 + AT_rich Low_complexity Low_complexity 1 45 0 185 284 123 25 chr17 6459118 6459199 -83045354 - MIR3 SINE MIR -33 175 87 1683 162 65 0 chr17 6459254 6459413 -83045140 - AluJo SINE Alu -11 301 154 194 88 0 29 chr17 6459413 6459447 -83045106 + (TTA)n Simple_repeat Simple_repeat 1 33 0 1683 162 65 0 chr17 6459447 6459565 -83044988 - AluJo SINE Alu -158 154 6 551 318 90 0 chr17 6459834 6460067 -83044486 - MIR SINE MIR -8 254 1 243 218 35 103 chr17 6460195 6460270 -83044283 + L2 LINE L2 3229 3299 -14 186 103 0 0 chr17 6460270 6460299 -83044254 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 243 218 35 103 chr17 6460299 6460310 -83044243 + L2 LINE L2 3299 3309 -4 2356 92 0 13 chr17 6460394 6460700 -83043853 + AluSx SINE Alu 1 302 -10 182 262 0 49 chr17 6460797 6460858 -83043695 - L2 LINE L2 -531 2783 2726 447 220 148 99 chr17 6462071 6462416 -83042137 + LTR33 LTR ERVL 2 363 -158 1102 285 103 14 chr17 6464226 6464664 -83039889 - L2 LINE L2 -8 3305 2829 219 250 88 15 chr17 6464897 6464965 -83039588 - L2 LINE L2 -23 3249 3177 291 315 33 0 chr17 6465329 6465421 -83039132 - MIR SINE MIR -78 184 90 546 279 85 5 chr17 6465425 6465626 -83038927 + LTR50 LTR ERVL 3 219 -576 406 295 179 0 chr17 6466674 6466847 -83037706 + MIR SINE MIR 58 261 -1 294 296 208 0 chr17 6466972 6467097 -83037456 + MIR SINE MIR 110 260 -2 934 356 59 41 chr17 6467161 6467741 -83036812 - L3 LINE CR1 -194 1383 788 2184 120 30 0 chr17 6467741 6468041 -83036512 - AluSx SINE Alu -3 309 1 934 356 59 41 chr17 6468041 6468125 -83036428 - L3 LINE CR1 -789 788 707 267 280 40 64 chr17 6468142 6468267 -83036286 - MIR SINE MIR -57 151 30 306 281 0 158 chr17 6468269 6468370 -83036183 - L3 LINE CR1 -4 1573 1536 1882 172 33 0 chr17 6468370 6468672 -83035881 - AluJo SINE Alu 0 312 1 306 281 0 158 chr17 6468672 6468830 -83035723 - L3 LINE CR1 -41 1536 1355 856 233 31 54 chr17 6469429 6469652 -83034901 + MER20 DNA MER1_type 2 219 0 573 222 50 61 chr17 6470337 6470535 -83034018 + MER63A DNA MER1_type 1 196 -14 520 190 12 104 chr17 6471467 6471630 -83032923 - MER58C DNA MER1_type -1 214 67 24 0 0 0 chr17 6472602 6472626 -83031927 + AT_rich Low_complexity Low_complexity 1 24 0 297 0 0 0 chr17 6472626 6472659 -83031894 + (TTA)n Simple_repeat Simple_repeat 2 34 0 2114 99 7 7 chr17 6472662 6472944 -83031609 - AluSx SINE Alu -30 282 1 263 349 23 0 chr17 6473876 6473962 -83030591 + L2 LINE L2 2686 2773 -541 479 167 9 0 chr17 6474021 6474135 -83030418 + (CA)n Simple_repeat Simple_repeat 1 115 0 374 225 101 76 chr17 6474483 6474825 -83029728 + L1MC4a LINE L1 5601 5824 -297 1721 179 32 32 chr17 6474972 6475414 -83029139 - L1MDa LINE L1 -4870 1670 1229 1018 164 11 91 chr17 6475427 6475690 -83028863 - L1MB8 LINE L1 -1 6177 5936 748 211 9 72 chr17 6475689 6475794 -83028759 - L1MDa LINE L1 -5306 1234 1149 * 2450 175 38 9 chr17 6475794 6476246 -83028307 - MLT1C LTR MaLR 0 467 3 748 211 9 72 chr17 6476246 6476363 -83028190 - L1MDa LINE L1 -5391 1149 1026 1490 181 199 6 chr17 6476363 6476530 -83028023 - MSTD LTR MaLR 0 396 263 186 43 0 0 chr17 6476530 6476553 -83028000 + (GA)n Simple_repeat Simple_repeat 2 24 0 1490 181 199 6 chr17 6476553 6476716 -83027837 - MSTD LTR MaLR -133 263 2 2000 231 87 57 chr17 6476716 6477529 -83027024 - L1MDa LINE L1 -5509 1031 23 440 308 21 12 chr17 6477560 6477751 -83026802 - L1 LINE L1 -2281 3865 3668 219 114 0 0 chr17 6478022 6478057 -83026496 + (T)n Simple_repeat Simple_repeat 1 35 0 578 320 119 50 chr17 6478188 6478826 -83025727 - L1 LINE L1 -2764 3382 2701 221 240 0 0 chr17 6479113 6479163 -83025390 + GA-rich Low_complexity Low_complexity 2 51 0 1753 120 0 0 chr17 6479386 6479636 -83024917 - AluSc SINE Alu -5 304 55 947 264 28 0 chr17 6480124 6480336 -83024217 + MIR SINE MIR 45 262 0 1567 169 196 88 chr17 6480816 6481347 -83023206 + LTR4 LTR ERV1 1 588 0 2086 259 87 32 chr17 6481802 6482185 -83022368 - HAL1 LINE L1 0 2507 2146 2010 154 3 0 chr17 6482185 6482491 -83022062 - AluSx SINE Alu -5 307 1 2086 259 87 32 chr17 6482491 6483004 -83021549 - HAL1 LINE L1 -361 2146 1562 1860 257 174 38 chr17 6483000 6483288 -83021265 - HAL1 LINE L1 -1165 1342 1095 * 2059 119 3 3 chr17 6483288 6483581 -83020972 - AluSc SINE Alu -16 293 1 1860 257 174 38 chr17 6483581 6483612 -83020941 - HAL1 LINE L1 -1412 1095 1070 3510 108 61 34 chr17 6483612 6483915 -83020638 + MER4B LTR ERV1 1 294 -316 2289 95 0 0 chr17 6483915 6484219 -83020334 - AluY SINE Alu -7 304 1 3510 108 61 34 chr17 6484219 6484509 -83020044 + MER4B LTR ERV1 294 610 0 1860 257 174 38 chr17 6484509 6485362 -83019191 - HAL1 LINE L1 -1437 1070 9 587 256 103 91 chr17 6485362 6485431 -83019122 - L1ME4a LINE L1 -3 6118 6051 2104 112 0 0 chr17 6485431 6485718 -83018835 + AluSx SINE Alu 26 312 0 587 256 103 91 chr17 6485718 6485934 -83018619 - L1ME4a LINE L1 -70 6051 5824 2284 82 3 0 chr17 6485934 6486228 -83018325 + AluSp SINE Alu 1 295 -18 587 256 103 91 chr17 6486228 6486359 -83018194 - L1ME4a LINE L1 -297 5824 5696 319 149 104 15 chr17 6486371 6486438 -83018115 + MER5B DNA MER1_type 72 144 -34 281 322 114 31 chr17 6486455 6486744 -83017809 - L1ME4a LINE L1 -2150 5658 5346 207 0 0 0 chr17 6487021 6487044 -83017509 + (CTG)n Simple_repeat Simple_repeat 2 24 0 2165 110 7 0 chr17 6487360 6487661 -83016892 - AluSx SINE Alu -9 303 1 797 216 42 6 chr17 6487914 6488081 -83016472 + MER5B DNA MER1_type 5 177 -1 343 217 250 0 chr17 6489016 6489136 -83015417 + MER5A DNA MER1_type 13 162 -27 528 223 54 34 chr17 6489142 6489290 -83015263 - MIR SINE MIR -110 152 2 228 274 81 40 chr17 6489389 6489513 -83015040 - L2 LINE L2 -212 3060 2932 1421 181 48 15 chr17 6490006 6490468 -83014085 - MER92B LTR ERV1 -2 552 1 401 263 54 70 chr17 6490844 6491030 -83013523 + MER5A DNA MER1_type 1 183 -6 * 425 289 58 28 chr17 6491018 6491339 -83013214 - L2 LINE L2 -215 3057 2727 433 333 88 5 chr17 6492527 6492743 -83011810 + L3 LINE CR1 1344 1577 0 368 261 185 0 chr17 6493257 6493376 -83011177 - MIR SINE MIR -5 257 117 3222 141 49 37 chr17 6493909 6494483 -83010070 - LTR1 LTR ERV1 -2 783 203 885 98 0 0 chr17 6494536 6494658 -83009895 - AluSq SINE Alu -13 300 179 676 91 0 0 chr17 6494658 6494746 -83009807 - AluSq SINE Alu -218 95 8 1101 93 115 11 chr17 6494746 6494928 -83009625 - LTR1 LTR ERV1 -584 201 1 299 196 22 76 chr17 6494990 6495048 -83009505 + HAL1 LINE L1 2409 2462 -45 1738 166 0 20 chr17 6495048 6495349 -83009204 - AluJo SINE Alu -17 295 1 299 196 22 76 chr17 6495349 6495382 -83009171 + HAL1 LINE L1 2462 2495 -12 1595 113 13 0 chr17 6495598 6495829 -83008724 - AluY SINE Alu -5 306 73 859 215 80 52 chr17 6496306 6496557 -83007996 + MIR SINE MIR 5 262 0 294 277 175 15 chr17 6496866 6497003 -83007550 - MER5A DNA MER1_type 0 189 31 2211 268 32 35 chr17 6498493 6499237 -83005316 + L1ME LINE L1 13 754 -5316 1733 15 0 0 chr17 6499341 6499538 -83005015 - L1P LINE L1 -1040 5106 4910 12060 26 1 2 chr17 6499538 6500947 -83003606 + L1P LINE L1 3515 4921 -1225 1645 113 41 15 chr17 6501066 6501141 -83003412 - L1PB3 LINE L1 -286 5868 5796 216 0 0 0 chr17 6501141 6501165 -83003388 + (CA)n Simple_repeat Simple_repeat 2 25 0 1645 113 41 15 chr17 6501165 6501355 -83003198 - L1PB3 LINE L1 -358 5796 5596 347 227 35 35 chr17 6501464 6501605 -83002948 - L1M4 LINE L1 -1481 4665 4525 991 265 0 0 chr17 6501741 6501964 -83002589 - MER58A DNA MER1_type 0 224 2 7965 17 0 4 chr17 6502071 6503097 -83001456 - L1PA3 LINE L1 -3 6152 5127 513 261 8 39 chr17 6503290 6503420 -83001133 - L2 LINE L2 -4 3309 3184 876 123 0 0 chr17 6503504 6503626 -83000927 + AluSq/x SINE Alu 14 135 -177 2125 132 0 0 chr17 6503626 6503936 -83000617 + AluSx SINE Alu 1 310 -2 2990 136 6 6 chr17 6503956 6504441 -83000112 + L1PA16 LINE L1 5682 6166 0 301 345 18 30 chr17 6504472 6504640 -82999913 - L2 LINE L2 -260 3053 2888 1832 164 59 0 chr17 6504791 6505114 -82999439 - MER54B LTR ERVL -451 342 1 199 265 61 10 chr17 6505167 6505265 -82999288 + L2 LINE L2 2853 2955 -317 233 271 0 12 chr17 6505692 6505777 -82998776 + GA-rich Low_complexity Low_complexity 1 84 0 384 326 98 36 chr17 6505779 6506601 -82997952 - L2 LINE L2 -82 3190 2316 302 336 18 0 chr17 6507870 6507983 -82996570 + MIR SINE MIR 34 148 -114 308 238 12 12 chr17 6508198 6508278 -82996275 + MIR SINE MIR 70 149 -113 2222 95 0 7 chr17 6508297 6508601 -82995952 - AluSg1 SINE Alu -7 302 1 1632 167 7 23 chr17 6508636 6508935 -82995618 + AluJb SINE Alu 1 294 -18 1288 237 219 9 chr17 6508950 6509406 -82995147 + L1MC4a LINE L1 7252 7803 -5 21 36 0 0 chr17 6509406 6509434 -82995119 + AT_rich Low_complexity Low_complexity 1 28 0 260 238 71 79 chr17 6510626 6510752 -82993801 + MIR SINE MIR 1 129 -79 292 271 12 12 chr17 6510944 6511029 -82993524 - L2 LINE L2 -31 3282 3198 688 271 52 49 chr17 6511200 6511548 -82993005 - L1MC/D LINE L1 -452 5669 5334 1670 141 65 3 chr17 6511648 6511938 -82992615 + AluSx SINE Alu 1 308 -4 3088 190 75 35 chr17 6513155 6513428 -82991125 - L1MB7 LINE L1 0 6184 5923 2430 50 3 0 chr17 6513428 6513729 -82990824 + AluY SINE Alu 1 302 -9 3088 190 75 35 chr17 6513729 6514232 -82990321 - L1MB7 LINE L1 -261 5923 5377 260 299 171 17 chr17 6514318 6514552 -82990001 - L1MC/D LINE L1 -1927 5881 5612 350 304 28 112 chr17 6514653 6514797 -82989756 + L3 LINE CR1 1381 1503 -74 2124 95 0 14 chr17 6514797 6515092 -82989461 - AluSx SINE Alu -19 293 3 350 304 28 112 chr17 6515092 6515161 -82989392 + L3 LINE CR1 1503 1576 -1 885 63 0 0 chr17 6515966 6516077 -82988476 - AluSc SINE Alu -10 299 189 2181 109 0 0 chr17 6516077 6516380 -82988173 + AluSg SINE Alu 3 305 -5 650 189 43 113 chr17 6516449 6516634 -82987919 + MER5B DNA MER1_type 7 178 0 270 282 13 0 chr17 6517149 6517227 -82987326 + MIR SINE MIR 57 135 -73 252 329 50 21 chr17 6517230 6517370 -82987183 - L3 LINE CR1 -137 1440 1297 2102 79 4 0 chr17 6517608 6517902 -82986651 + AluSx SINE Alu 16 310 0 602 298 124 3 chr17 6517971 6518330 -82986223 + L2 LINE L2 2623 3029 -284 1714 87 0 0 chr17 6518332 6518551 -82986002 - AluSg/x SINE Alu -19 293 75 395 119 0 0 chr17 6518552 6518611 -82985942 + AluS SINE Alu 5 63 -238 651 206 99 110 chr17 6518611 6518903 -82985650 + L2 LINE L2 3024 3312 -1 373 306 32 48 chr17 6518905 6519091 -82985462 + MIR SINE MIR 23 205 -57 2079 110 19 13 chr17 6519838 6520147 -82984406 - AluSx SINE Alu -1 311 1 681 214 146 89 chr17 6520157 6520493 -82984060 - L1ME3A LINE L1 0 6170 5816 238 195 110 0 chr17 6520862 6520944 -82983609 - L1ME LINE L1 -314 5856 5766 3764 122 14 4 chr17 6521045 6521595 -82982958 - LTR9B LTR ERV1 0 644 89 2204 71 10 3 chr17 6521595 6521892 -82982661 + AluY SINE Alu 1 299 -12 780 218 62 25 chr17 6521892 6522185 -82982368 - L1ME LINE L1 -639 5525 5224 421 322 105 34 chr17 6522242 6522570 -82981983 - L1ME LINE L1 -1276 4870 4531 1169 188 19 5 chr17 6523036 6523249 -82981304 - MER20 DNA MER1_type -3 216 1 556 294 84 33 chr17 6523550 6523849 -82980704 - MLT1K LTR MaLR 0 588 275 582 306 62 36 chr17 6524144 6524811 -82979742 - L1ME LINE L1 -2177 3969 3286 670 145 97 32 chr17 6525091 6525215 -82979338 + FLAM_C SINE Alu 1 132 -1 412 269 80 71 chr17 6526130 6526368 -82978185 - L1ME LINE L1 -3123 3023 2784 706 253 99 35 chr17 6526439 6526814 -82977739 - HAL1 LINE L1 -1012 1495 1097 1161 191 74 0 chr17 6526833 6527067 -82977486 + L1MB5 LINE L1 5858 6108 -66 460 290 52 72 chr17 6527167 6527322 -82977231 - HAL1 LINE L1 -1433 1074 917 23 33 0 0 chr17 6527322 6527352 -82977201 + AT_rich Low_complexity Low_complexity 1 30 0 460 290 52 72 chr17 6527352 6527376 -82977177 - HAL1 LINE L1 -1590 917 894 2712 167 105 8 chr17 6527376 6527890 -82976663 + MLT1F1 LTR MaLR 4 567 0 460 290 52 72 chr17 6527890 6528028 -82976525 - HAL1 LINE L1 -1613 894 734 2076 125 0 4 chr17 6528401 6528680 -82975873 - AluSx SINE Alu -34 278 1 2302 100 0 0 chr17 6528958 6529249 -82975304 - AluSg SINE Alu -19 291 1 1035 213 0 82 chr17 6529316 6529560 -82974993 - MER58A DNA MER1_type 0 224 1 449 250 91 0 chr17 6529592 6529724 -82974829 + L1MD2 LINE L1 6211 6354 -5 1096 76 0 0 chr17 6529775 6529906 -82974647 + AluSp SINE Alu 2 132 -181 2294 96 13 0 chr17 6529908 6530210 -82974343 + AluSp SINE Alu 1 306 -7 974 156 6 31 chr17 6530540 6530700 -82973853 - FRAM SINE Alu -18 158 3 347 261 17 34 chr17 6531131 6531250 -82973303 - L2 LINE L2 -11 3261 3145 2471 91 0 0 chr17 6531859 6532168 -82972385 + AluSg SINE Alu 1 309 -1 182 194 0 0 chr17 6532404 6532440 -82972113 - L2 LINE L2 0 3313 3278 689 248 143 24 chr17 6532566 6533006 -82971547 - L2 LINE L2 -71 3242 2741 2385 79 0 3 chr17 6533009 6533300 -82971253 + AluSq SINE Alu 1 290 -23 457 121 33 0 chr17 6533300 6533391 -82971162 + G-rich Low_complexity Low_complexity 2 95 0 533 206 99 110 chr17 6533577 6533869 -82970684 - L2 LINE L2 -1 3312 3024 443 129 0 0 chr17 6533869 6533931 -82970622 - AluS SINE Alu -248 63 2 743 256 89 4 chr17 6533931 6534201 -82970352 - L2 LINE L2 -769 2545 2253 2297 95 0 13 chr17 6535674 6535979 -82968574 - AluY SINE Alu -10 301 1 267 319 25 8 chr17 6536156 6536275 -82968278 - MIR SINE MIR -29 233 113 378 303 36 18 chr17 6538150 6538315 -82966238 - L3 LINE CR1 -37 1540 1373 1686 263 70 92 chr17 6538585 6540061 -82964492 + L1MEc LINE L1 837 2237 -3978 983 234 128 35 chr17 6540061 6540104 -82964449 + L1M4 LINE L1 4287 4325 -1821 2322 115 0 0 chr17 6540104 6540408 -82964145 + AluSg SINE Alu 1 304 -6 983 234 128 35 chr17 6540408 6540740 -82963813 + L1M4 LINE L1 4325 4697 -1449 5539 148 50 35 chr17 6540747 6541139 -82963414 - Tigger3b DNA MER2_type -1797 1231 846 2276 117 0 0 chr17 6541139 6541448 -82963105 - AluSc SINE Alu 0 309 1 5539 148 50 35 chr17 6541448 6541691 -82962862 - Tigger3b DNA MER2_type -2182 846 608 189 0 0 0 chr17 6541691 6541712 -82962841 + (TATG)n Simple_repeat Simple_repeat 4 24 0 5539 148 50 35 chr17 6541712 6542002 -82962551 - Tigger3b DNA MER2_type -2420 608 286 2051 124 0 54 chr17 6542002 6542317 -82962236 + AluSq SINE Alu 1 298 -15 5539 148 50 35 chr17 6542317 6542431 -82962122 - Tigger3b DNA MER2_type -2742 286 175 1565 211 54 30 chr17 6542519 6543053 -82961500 + L1M4 LINE L1 4749 5343 -803 2574 68 0 3 chr17 6543078 6543385 -82961168 - AluY SINE Alu -5 306 1 1241 114 51 0 chr17 6543385 6543561 -82960992 - AluSg/x SINE Alu -3 309 125 378 291 7 11 chr17 6543610 6543760 -82960793 + MIR SINE MIR 21 168 -60 2745 42 0 0 chr17 6545067 6545377 -82959176 + AluY SINE Alu 1 310 -1 286 270 0 14 chr17 6545660 6545734 -82958819 - MIR SINE MIR -143 119 47 263 221 70 35 chr17 6546164 6546250 -82958303 - MIR SINE MIR -81 181 93 284 287 31 23 chr17 6546509 6546638 -82957915 + MIR3 SINE MIR 41 170 -38 1092 124 18 0 chr17 6546655 6546943 -82957610 + (TCCA)n Simple_repeat Simple_repeat 1 293 0 1029 227 10 0 chr17 6546994 6547192 -82957361 - MER58A DNA MER1_type -24 200 1 256 269 74 9 chr17 6547397 6547505 -82957048 - L2 LINE L2 -327 2986 2872 601 185 29 0 chr17 6548336 6548509 -82956044 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 772 110 25 12 chr17 6548542 6548705 -82955848 + (TCCA)n Simple_repeat Simple_repeat 1 165 0 1285 110 0 0 chr17 6548732 6548905 -82955648 - AluSp SINE Alu -1 312 140 578 276 0 0 chr17 6549257 6549402 -82955151 + MIR SINE MIR 94 238 -24 202 320 96 32 chr17 6549990 6550209 -82954344 - L3 LINE CR1 -56 1521 1289 446 273 103 56 chr17 6550355 6550438 -82954115 + MLT1H LTR MaLR 25 103 -446 2255 85 0 10 chr17 6550438 6550731 -82953822 - AluSg SINE Alu -20 290 1 446 273 103 56 chr17 6550731 6551100 -82953453 + MLT1H LTR MaLR 103 543 -6 286 318 95 24 chr17 6551174 6551300 -82953253 + MIR3 SINE MIR 49 183 -25 2049 125 0 3 chr17 6551727 6552014 -82952539 - AluSx SINE Alu -26 286 1 231 308 53 24 chr17 6552339 6552508 -82952045 + L1MDa LINE L1 1534 1707 -4833 196 213 128 0 chr17 6552543 6552590 -82951963 - L2 LINE L2 0 3313 3261 282 114 10 44 chr17 6553462 6553514 -82951039 - MLT2C1 LTR ERVL 0 520 347 2450 150 61 74 chr17 6553589 6553698 -82950855 + LTR44 LTR ERV1 1 110 -409 2339 88 7 13 chr17 6553698 6554005 -82950548 - AluSx SINE Alu -7 305 1 2450 150 61 74 chr17 6554005 6554421 -82950132 + LTR44 LTR ERV1 110 519 0 2384 160 15 75 chr17 6555378 6555915 -82948638 + LTR57-int LTR ERVL 311 815 -4528 557 132 142 0 chr17 6555915 6556021 -82948532 + LTR49-int LTR ERV1 951 1071 -7049 * 785 235 53 30 chr17 6555981 6556245 -82948308 + LTR57-int LTR ERVL 1322 1591 -3752 * 1813 179 28 37 chr17 6556011 6556448 -82948105 + LTR49-int LTR ERV1 1317 1749 -6371 1316 171 100 150 chr17 6556460 6557282 -82947271 + LTR49-int LTR ERV1 2950 3730 -2868 2234 219 100 52 chr17 6557354 6557803 -82946750 + LTR49-int LTR ERV1 2477 2903 -3335 244 33 0 0 chr17 6557803 6557833 -82946720 + HSMAR1 DNA Mariner 1 30 -1257 2234 219 100 52 chr17 6557833 6558228 -82946325 + LTR49-int LTR ERV1 2903 3278 -2960 1868 141 0 14 chr17 6558228 6558518 -82946035 - AluSx SINE Alu -14 298 13 2234 219 100 52 chr17 6558518 6558914 -82945639 + LTR49-int LTR ERV1 3278 4964 -1274 2798 135 59 43 chr17 6559183 6559280 -82945273 + LTR44 LTR ERV1 1 95 -424 2554 54 0 0 chr17 6559280 6559576 -82944977 - AluY SINE Alu -15 296 1 2798 135 59 43 chr17 6559576 6559989 -82944564 + LTR44 LTR ERV1 95 519 0 1700 210 25 6 chr17 6559995 6560348 -82944205 - MLT2D LTR ERVL -54 360 1 2369 69 24 0 chr17 6560577 6560867 -82943686 + AluSc SINE Alu 1 297 -12 492 303 154 0 chr17 6560903 6561111 -82943442 - MIR SINE MIR -21 241 2 242 239 80 11 chr17 6561461 6561549 -82943004 - L2 LINE L2 -42 3230 3137 609 254 71 61 chr17 6561587 6561653 -82942900 - LTR16C LTR ERVL -28 463 399 2219 107 0 26 chr17 6561653 6561963 -82942590 + AluSx SINE Alu 1 302 -10 609 254 71 61 chr17 6561963 6562176 -82942377 - LTR16C LTR ERVL -92 399 181 2233 104 0 3 chr17 6562865 6563162 -82941391 - AluSq SINE Alu -4 309 14 362 299 21 36 chr17 6563258 6563452 -82941101 - L2 LINE L2 -2075 1239 1049 21 0 0 0 chr17 6563831 6563852 -82940701 + AT_rich Low_complexity Low_complexity 1 21 0 2578 62 0 0 chr17 6564363 6564672 -82939881 - AluY SINE Alu -2 309 1 575 171 117 0 chr17 6564744 6564855 -82939698 - MSTA LTR MaLR 0 428 305 3398 116 40 78 chr17 6564861 6565493 -82939060 - LTR1 LTR ERV1 0 785 178 29 47 0 0 chr17 6565523 6565566 -82938987 + AT_rich Low_complexity Low_complexity 1 43 0 330 86 32 75 chr17 6565583 6565769 -82938784 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 * 348 111 64 23 chr17 6565728 6565899 -82938654 + (TA)n Simple_repeat Simple_repeat 1 178 0 210 235 12 25 chr17 6565900 6565981 -82938572 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 211 74 56 68 chr17 6565994 6566156 -82938397 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 2069 183 112 9 chr17 6566156 6567196 -82937357 - SATR1 Satellite Satellite -5 1147 1 1950 103 0 4 chr17 6567196 6567448 -82937105 - AluSq SINE Alu -62 251 1 1647 138 0 66 chr17 6567457 6567772 -82936781 - AluSg SINE Alu 0 310 20 935 128 78 11 chr17 6567780 6567960 -82936593 - LTR1 LTR ERV1 -593 192 1 1554 136 23 58 chr17 6567960 6568268 -82936285 - MSTA LTR MaLR -131 297 1 258 32 0 0 chr17 6568311 6568342 -82936211 + (TG)n Simple_repeat Simple_repeat 2 32 0 856 299 60 20 chr17 6568355 6569356 -82935197 - L1MC4a LINE L1 -529 5710 4957 1353 226 14 44 chr17 6569527 6569890 -82934663 - MLT1A1 LTR MaLR 0 365 14 1941 126 58 3 chr17 6570008 6570301 -82934252 - AluSx SINE Alu -3 309 1 664 97 0 124 chr17 6570402 6570547 -82934006 - AluY SINE Alu 0 311 185 1020 307 128 22 chr17 6570548 6571460 -82933093 - L1MC4a LINE L1 -4326 2070 1062 2180 128 3 0 chr17 6571483 6571781 -82932772 - AluY SINE Alu -12 299 1 29 0 0 0 chr17 6572222 6572251 -82932302 + AT_rich Low_complexity Low_complexity 1 29 0 1678 120 89 0 chr17 6572251 6572509 -82932044 - L1PB3 LINE L1 -7 6147 5867 581 325 81 42 chr17 6572674 6573770 -82930783 - L1M4 LINE L1 -1872 4274 3136 390 167 14 14 chr17 6574241 6574313 -82930240 - MER68 LTR ERV1 -227 335 264 2282 117 0 0 chr17 6574904 6575204 -82929349 - AluSx SINE Alu -12 300 1 2759 195 19 35 chr17 6575401 6575971 -82928582 - MER68 LTR ERV1 0 562 2 2560 68 0 0 chr17 6576384 6576694 -82927859 - AluY SINE Alu -1 310 1 443 339 50 21 chr17 6576718 6577001 -82927552 + L2 LINE L2 2200 2490 -824 403 207 112 17 chr17 6577017 6577133 -82927420 - MLT1H LTR MaLR -2 547 421 487 293 122 11 chr17 6577150 6577338 -82927215 - MLT1H LTR MaLR -328 221 13 313 367 103 33 chr17 6577379 6577909 -82926644 + L2 LINE L2 2549 3129 -143 637 181 0 0 chr17 6577978 6578083 -82926470 + MER58B DNA MER1_type 225 329 -12 1080 218 5 0 chr17 6578809 6579020 -82925533 + MER58A DNA MER1_type 1 212 -12 772 115 0 44 chr17 6580446 6580559 -82923994 - AluSg/x SINE Alu -27 285 178 300 292 0 34 chr17 6580564 6580653 -82923900 + MIR SINE MIR 106 191 -71 2300 107 0 7 chr17 6580750 6581049 -82923504 - AluSx SINE Alu -15 297 1 1758 148 0 21 chr17 6581925 6582209 -82922344 - AluSc SINE Alu -3 306 29 311 302 87 8 chr17 6583081 6583207 -82921346 + MIR3 SINE MIR 69 204 -4 1033 49 18 18 chr17 6583336 6583499 -82921054 + (TTTC)n Simple_repeat Simple_repeat 4 166 0 337 130 43 0 chr17 6583507 6583576 -82920977 + CT-rich Low_complexity Low_complexity 2 73 0 1937 173 3 25 chr17 6583576 6583894 -82920659 - AluJo SINE Alu -1 311 1 617 363 116 3 chr17 6584215 6584604 -82919949 - L3 LINE CR1 -1 1576 1144 366 289 134 34 chr17 6584869 6585018 -82919535 - MIR3 SINE MIR -11 197 34 420 327 61 6 chr17 6585676 6585841 -82918712 + MIR SINE MIR 33 206 -56 555 200 9 0 chr17 6586012 6586122 -82918431 - MIR SINE MIR 0 262 152 1148 178 22 18 chr17 6586123 6586348 -82918205 + MER46A DNA MER2_type 3 228 -8 288 290 120 0 chr17 6586354 6586454 -82918099 - MIR SINE MIR -108 154 43 339 311 114 0 chr17 6586502 6586598 -82917955 - HAL1 LINE L1 -1016 1491 1375 2401 103 3 0 chr17 6586598 6586910 -82917643 - AluSp SINE Alu 0 313 1 339 311 114 0 chr17 6586910 6586945 -82917608 - HAL1 LINE L1 -1132 1375 1345 300 339 52 22 chr17 6586947 6587310 -82917243 - L1MEd LINE L1 -4886 1233 860 2248 131 0 6 chr17 6587854 6588168 -82916385 - AluSx SINE Alu 0 312 1 32 43 0 0 chr17 6588269 6588315 -82916238 + AT_rich Low_complexity Low_complexity 1 46 0 2214 97 0 58 chr17 6588517 6588847 -82915706 - AluSx SINE Alu -1 311 1 188 67 33 0 chr17 6590271 6590301 -82914252 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2318 79 10 0 chr17 6590303 6590593 -82913960 - AluSp SINE Alu -20 293 1 189 0 0 0 chr17 6591034 6591055 -82913498 + (T)n Simple_repeat Simple_repeat 1 21 0 864 198 45 124 chr17 6591577 6591750 -82912803 + MLT1B LTR MaLR 2 187 -203 2256 84 16 26 chr17 6591750 6592059 -82912494 + AluY SINE Alu 1 306 -5 864 198 45 124 chr17 6592059 6592179 -82912374 + MLT1B LTR MaLR 187 265 -125 2051 127 21 3 chr17 6592179 6592470 -82912083 + AluSx SINE Alu 1 296 -16 864 198 45 124 chr17 6592470 6592529 -82912024 + MLT1B LTR MaLR 265 327 -63 330 306 61 16 chr17 6592721 6592869 -82911684 - MIR SINE MIR -61 147 33 304 152 0 0 chr17 6595865 6595911 -82908642 + MER46A DNA MER2_type 1 46 -190 576 244 99 112 chr17 6596547 6597011 -82907542 + LTR33A LTR ERVL 66 523 0 433 308 103 52 chr17 6597077 6597521 -82907032 + L2 LINE L2 2460 2955 -317 2293 110 3 0 chr17 6597521 6597821 -82906732 - AluSx SINE Alu -11 301 1 433 308 103 52 chr17 6597821 6598130 -82906423 + L2 LINE L2 2955 3247 -25 927 148 228 0 chr17 6598844 6599033 -82905520 + MER46A DNA MER2_type 1 232 -4 1172 245 52 16 chr17 6599103 6599449 -82905104 + L1MD2 LINE L1 5978 6339 -20 2261 104 3 0 chr17 6599449 6599738 -82904815 - AluSg SINE Alu -20 290 1 1172 245 52 16 chr17 6599738 6599759 -82904794 + L1MD2 LINE L1 6339 6358 -1 459 152 0 0 chr17 6600527 6600606 -82903947 + (TG)n Simple_repeat Simple_repeat 1 79 0 316 323 57 31 chr17 6600783 6600975 -82903578 + MIR3 SINE MIR 1 197 -11 720 294 97 32 chr17 6601190 6601499 -82903054 - L3 LINE CR1 -106 1471 1143 2602 77 3 0 chr17 6601506 6601816 -82902737 - AluSp SINE Alu -2 311 1 228 292 52 0 chr17 6602123 6602219 -82902334 - L1ME LINE L1 -331 5790 5690 358 258 116 32 chr17 6602486 6602641 -82901912 + MIR SINE MIR 1 168 -94 1543 223 108 7 chr17 6602671 6603116 -82901437 - MLT1D LTR MaLR 0 505 16 1389 247 105 70 chr17 6603147 6603747 -82900806 + L2 LINE L2 2110 2730 -584 294 118 0 0 chr17 6604492 6604543 -82900010 - L1MB2 LINE L1 -1 6170 6120 2138 124 7 13 chr17 6604543 6604842 -82899711 - AluSq SINE Alu -16 297 1 373 297 120 0 chr17 6605783 6605958 -82898595 + MIR SINE MIR 51 246 -16 5102 56 0 0 chr17 6606372 6606993 -82897560 - L1PA8 LINE L1 0 6172 5552 180 250 0 0 chr17 6607087 6607123 -82897430 - MIR SINE MIR -70 192 157 375 23 0 0 chr17 6607280 6607324 -82897229 + (CA)n Simple_repeat Simple_repeat 2 45 0 1627 195 74 39 chr17 6607629 6607897 -82896656 - MLT1D LTR MaLR -4 501 209 204 67 0 0 chr17 6607897 6607927 -82896626 + (CACAT)n Simple_repeat Simple_repeat 4 33 0 1627 195 74 39 chr17 6607927 6608120 -82896433 - MLT1D LTR MaLR -296 209 24 2332 207 30 18 chr17 6608608 6609110 -82895443 - LTR40a LTR ERVL -4 515 8 207 149 257 40 chr17 6609172 6609246 -82895307 - MIR SINE MIR -66 196 107 599 320 44 55 chr17 6609301 6609484 -82895069 + ERVL LTR ERVL 4302 4485 -1279 2142 109 35 0 chr17 6609484 6609769 -82894784 - AluSp SINE Alu -18 295 1 599 320 44 55 chr17 6609769 6610041 -82894512 + ERVL LTR ERVL 4485 4752 -1012 353 241 23 11 chr17 6610103 6610190 -82894363 + ERVL LTR ERVL 4894 4981 -783 2091 144 0 0 chr17 6610694 6611000 -82893553 - AluSx SINE Alu -6 306 1 2356 92 0 13 chr17 6611119 6611425 -82893128 - AluSq SINE Alu -11 302 1 3322 152 29 15 chr17 6612014 6612285 -82892268 + L1MB3 LINE L1 5562 5828 -355 2412 95 0 3 chr17 6612285 6612590 -82891963 + AluSq SINE Alu 1 304 -9 3322 152 29 15 chr17 6612590 6612931 -82891622 + L1MB3 LINE L1 5828 6183 0 2277 124 0 3 chr17 6612942 6613256 -82891297 + AluSq SINE Alu 1 313 0 212 353 35 0 chr17 6613836 6613921 -82890632 + MIR SINE MIR 62 149 -59 186 80 9 0 chr17 6614640 6614715 -82889838 + (A)n Simple_repeat Simple_repeat 1 30 0 274 200 67 40 chr17 6614965 6615040 -82889513 - MER5B DNA MER1_type -101 77 1 390 307 200 5 chr17 6616122 6616327 -82888226 + MIR SINE MIR 17 261 -1 777 301 39 52 chr17 6616441 6616879 -82887674 + MLT1K LTR MaLR 140 571 -17 2253 110 0 0 chr17 6617875 6618175 -82886378 + AluY SINE Alu 1 300 -11 2199 124 51 28 chr17 6618481 6618837 -82885716 + THE1B LTR MaLR 1 364 0 2176 115 3 7 chr17 6620363 6620658 -82883895 - AluSq SINE Alu -19 294 1 402 283 134 37 chr17 6620819 6620957 -82883596 - MIR SINE MIR -55 207 45 2532 193 107 4 chr17 6620957 6621374 -82883179 - MLT1F1 LTR MaLR 0 567 86 198 0 0 0 chr17 6621374 6621396 -82883157 + (TTCA)n Simple_repeat Simple_repeat 4 25 0 2532 193 107 4 chr17 6621396 6621492 -82883061 - MLT1F1 LTR MaLR -481 86 1 402 283 134 37 chr17 6621492 6621540 -82883013 - MIR SINE MIR -217 45 3 377 322 131 21 chr17 6621920 6622311 -82882242 + L2 LINE L2 2615 3043 -229 189 0 0 0 chr17 6623580 6623601 -82880952 + (T)n Simple_repeat Simple_repeat 1 21 0 539 262 87 0 chr17 6623849 6624021 -82880532 - LTR33A LTR ERVL -40 483 297 231 316 26 0 chr17 6624240 6624316 -82880237 - L2 LINE L2 -633 2681 2604 732 230 7 0 chr17 6624322 6624474 -82880079 - MLT1E LTR MaLR -8 585 433 422 191 101 0 chr17 6624531 6624620 -82879933 - MLT1E1 LTR MaLR -556 98 1 392 165 24 24 chr17 6624620 6624705 -82879848 - L2 LINE L2 -704 2610 2526 2261 113 0 3 chr17 6625331 6625624 -82878929 - AluSq SINE Alu -17 296 5 458 327 127 9 chr17 6625708 6625845 -82878708 - L2 LINE L2 -276 2996 2877 2050 127 0 17 chr17 6625845 6626145 -82878408 + AluSq SINE Alu 1 295 -18 458 327 127 9 chr17 6626145 6626271 -82878282 - L2 LINE L2 -395 2877 2705 2419 90 0 3 chr17 6627395 6627695 -82876858 - AluSx SINE Alu -13 299 1 426 222 32 56 chr17 6627751 6627774 -82876779 - MIR SINE MIR -131 131 109 2152 211 132 9 chr17 6627774 6628304 -82876249 + MLT1G1 LTR MaLR 1 595 0 426 222 32 56 chr17 6628304 6628406 -82876147 - MIR SINE MIR -153 109 9 201 231 58 0 chr17 6628407 6628459 -82876094 + MIR SINE MIR 194 248 -14 241 317 0 0 chr17 6629248 6629308 -82875245 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 639 251 112 27 chr17 6629315 6629538 -82875015 + MIR SINE MIR 1 242 -20 2046 142 0 40 chr17 6629745 6630068 -82874485 - AluSx SINE Alu -2 310 1 191 233 194 0 chr17 6630135 6630238 -82874315 - MIR SINE MIR -69 193 71 2288 116 0 0 chr17 6630869 6631170 -82873383 - AluSx SINE Alu -11 301 1 2392 97 3 0 chr17 6631405 6631705 -82872848 - AluSp SINE Alu -12 301 1 1438 217 32 32 chr17 6631734 6632075 -82872478 - MER58B DNA MER1_type 0 341 1 1444 43 0 32 chr17 6632452 6632639 -82871914 - L1PA8 LINE L1 -400 5772 5592 2871 71 15 18 chr17 6632639 6633030 -82871523 + L1PA8 LINE L1 5779 6170 -2 24 32 0 0 chr17 6633824 6633855 -82870698 + AT_rich Low_complexity Low_complexity 1 31 0 649 305 102 24 chr17 6634094 6634514 -82870039 + MLT1K LTR MaLR 101 553 -35 207 0 0 0 chr17 6634975 6634998 -82869555 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 248 77 26 0 chr17 6635279 6635318 -82869235 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 8224 194 33 26 chr17 6635328 6637560 -82866993 - L1MC1 LINE L1 -7 6326 4111 2424 61 3 14 chr17 6637560 6637857 -82866696 - AluY SINE Alu -17 294 1 8224 194 33 26 chr17 6637857 6638153 -82866400 - L1MC1 LINE L1 -2222 4111 3819 2488 62 7 7 chr17 6638153 6638460 -82866093 - AluY SINE Alu -4 307 1 8224 194 33 26 chr17 6638460 6639086 -82865467 - L1MC1 LINE L1 -2514 3819 3153 2398 212 11 6 chr17 6639354 6639902 -82864651 + L1 LINE L1 4242 4792 -1354 22 70 0 0 chr17 6639924 6639967 -82864586 + AT_rich Low_complexity Low_complexity 1 43 0 4801 79 5 2 chr17 6639967 6640603 -82863950 - L1PB1 LINE L1 0 6151 5514 394 223 90 42 chr17 6640605 6640771 -82863782 - MLT1D LTR MaLR -219 286 113 916 197 112 5 chr17 6640838 6641017 -82863536 + MSTA LTR MaLR 1 202 -226 1971 98 52 38 chr17 6641017 6641304 -82863249 + AluSx SINE Alu 1 291 -21 2445 102 0 0 chr17 6641314 6641656 -82862897 - L1P LINE L1 -3154 2992 2651 4416 33 0 0 chr17 6641656 6642167 -82862386 + L1PA7 LINE L1 5642 6154 0 1228 159 100 9 chr17 6642171 6642391 -82862162 + MSTA LTR MaLR 187 426 -2 936 203 95 0 chr17 6642411 6642652 -82861901 + L1MA4 LINE L1 6036 6299 -1 1869 137 48 0 chr17 6642684 6642976 -82861577 + AluSp SINE Alu 1 306 -7 2298 118 0 9 chr17 6643714 6644029 -82860524 + AluSx SINE Alu 1 312 0 1919 233 99 8 chr17 6645723 6646229 -82858324 - MLT1H1 LTR MaLR 0 555 4 307 293 47 0 chr17 6646356 6646462 -82858091 + MIR SINE MIR 118 228 -34 305 200 128 124 chr17 6646552 6646802 -82857751 - MER112 DNA MER1_type -9 251 1 257 185 46 169 chr17 6647567 6647762 -82856791 + MLT1K LTR MaLR 408 578 -10 505 239 104 54 chr17 6648778 6649000 -82855553 + MER112 DNA MER1_type 3 235 -25 320 325 62 44 chr17 6649058 6649475 -82855078 - L2 LINE L2 -218 3054 2623 231 280 40 103 chr17 6649526 6649701 -82854852 - MER91A DNA MER1_type -32 164 1 207 303 71 10 chr17 6651114 6651213 -82853340 - MIR SINE MIR -130 132 28 1705 193 58 28 chr17 6652311 6652552 -82852001 + MLT1C LTR MaLR 22 281 -186 1668 102 0 4 chr17 6652552 6652777 -82851776 + AluSq SINE Alu 86 309 -4 1705 193 58 28 chr17 6652777 6652928 -82851625 + MLT1C LTR MaLR 281 426 -41 2269 95 6 25 chr17 6653620 6653935 -82850618 - AluSx SINE Alu -1 311 3 1415 218 51 9 chr17 6654753 6655069 -82849484 + Charlie1a DNA MER1_type 14 342 -1113 2033 67 0 0 chr17 6655085 6655355 -82849198 + AluY SINE Alu 44 313 0 1481 213 45 3 chr17 6655355 6655669 -82848884 - Charlie1a DNA MER1_type -1115 340 14 4380 185 102 18 chr17 6656066 6657107 -82847446 + Charlie1a DNA MER1_type 327 1454 -1 2001 137 42 70 chr17 6657476 6657642 -82846911 + MLT1B LTR MaLR 1 170 -220 2561 65 0 3 chr17 6657642 6657949 -82846604 + AluY SINE Alu 1 306 -5 2001 137 42 70 chr17 6657949 6658183 -82846370 + MLT1B LTR MaLR 170 390 0 1242 200 19 0 chr17 6658517 6658777 -82845776 + MER33 DNA MER1_type 1 265 -59 5277 147 39 4 chr17 6658782 6659814 -82844739 + L1PA8 LINE L1 5111 6174 0 2237 124 8 39 chr17 6659814 6660068 -82844485 + L1PA16 LINE L1 5778 6017 -149 2099 170 75 12 chr17 6660068 6660467 -82844086 + MSTB LTR MaLR 3 426 0 2237 124 8 39 chr17 6660467 6660599 -82843954 + L1PA16 LINE L1 6017 6152 -14 2373 69 0 39 chr17 6661059 6661365 -82843188 - AluYa5 SINE Alu -16 295 2 892 247 11 0 chr17 6661493 6661679 -82842874 + MER5A DNA MER1_type 1 188 -1 884 45 18 0 chr17 6661992 6662104 -82842449 + L1PA5 LINE L1 6039 6152 -2 290 186 29 20 chr17 6662426 6662528 -82842025 + CT-rich Low_complexity Low_complexity 2 104 0 329 250 12 12 chr17 6662579 6662663 -82841890 - MIR SINE MIR -21 241 158 546 206 66 0 chr17 6662767 6662900 -82841653 - MIR SINE MIR -52 156 17 1534 197 14 17 chr17 6663300 6663661 -82840892 + L1P LINE L1 4984 5343 -803 3231 233 36 17 chr17 6664169 6665075 -82839478 - L1ME1 LINE L1 -61 6900 5986 915 138 22 2 chr17 6665075 6665235 -82839318 + L1PB1 LINE L1 5989 6154 0 2451 253 95 29 chr17 6665249 6666685 -82837868 - L1ME1 LINE L1 -954 5987 4387 1312 233 75 30 chr17 6666710 6667233 -82837320 - L1ME1 LINE L1 -3526 3415 2897 7127 248 34 34 chr17 6667680 6668064 -82836489 - L1ME1 LINE L1 -4176 2946 2563 2001 98 4 4 chr17 6668064 6668330 -82836223 - AluSc SINE Alu -13 296 31 7127 248 34 34 chr17 6668330 6670683 -82833870 - L1ME1 LINE L1 -4559 2563 1 1453 208 123 117 chr17 6670781 6671300 -82833253 - MLT1G1 LTR MaLR 0 595 81 1530 172 0 48 chr17 6671300 6671403 -82833150 + AluJb SINE Alu 37 143 -169 2114 114 31 0 chr17 6671403 6671693 -82832860 + AluSq SINE Alu 1 299 -14 596 38 13 0 chr17 6671693 6671772 -82832781 + (TCTA)n Simple_repeat Simple_repeat 4 83 0 1530 172 0 48 chr17 6671772 6671957 -82832596 + AluJb SINE Alu 141 312 0 1453 208 123 117 chr17 6671957 6672028 -82832525 - MLT1G1 LTR MaLR -514 81 1 588 296 22 30 chr17 6672327 6672557 -82831996 + MIR SINE MIR 28 255 -7 2230 101 0 3 chr17 6672558 6672846 -82831707 - AluSx SINE Alu -12 300 14 22 35 0 0 chr17 6673086 6673115 -82831438 + AT_rich Low_complexity Low_complexity 1 29 0 1210 124 0 17 chr17 6673555 6673733 -82830820 - AluSg/x SINE Alu -1 311 137 2464 60 0 3 chr17 6674167 6674478 -82830075 + AluSp SINE Alu 1 310 0 228 326 45 0 chr17 6674872 6674961 -82829592 + MIR SINE MIR 47 139 -69 2869 141 22 13 chr17 6675681 6675786 -82828767 + LTR24 LTR ERV1 10 113 -354 2284 95 24 0 chr17 6675786 6676081 -82828472 - AluSp SINE Alu -11 302 1 2869 141 22 13 chr17 6676081 6676429 -82828124 + LTR24 LTR ERV1 113 467 0 389 276 55 31 chr17 6676449 6676612 -82827941 - L1ME3 LINE L1 -1 6161 5995 321 130 0 0 chr17 6676613 6676659 -82827894 - L1PA5 LINE L1 -202 5952 5907 * 1747 76 25 4 chr17 6676632 6676869 -82827684 + L1PA4 LINE L1 5914 6155 0 247 215 43 21 chr17 6677389 6677482 -82827071 - L1ME3 LINE L1 -69 6093 5999 2217 84 19 0 chr17 6677719 6678109 -82826444 - L1M3 LINE L1 -581 5602 5201 1505 71 0 15 chr17 6678109 6678305 -82826248 + L1PA8 LINE L1 5973 6166 -6 475 61 0 0 chr17 6678245 6678311 -82826242 + L1PA8 LINE L1 6107 6172 0 * 799 188 17 33 chr17 6678308 6678489 -82826064 - L1MC3 LINE L1 -6 7779 7602 * 3995 189 38 6 chr17 6678488 6678934 -82825619 - L1MC3 LINE L1 -457 7328 6845 252 0 0 0 chr17 6678934 6678962 -82825591 + (TG)n Simple_repeat Simple_repeat 2 29 0 3995 189 38 6 chr17 6678962 6679296 -82825257 - L1MC3 LINE L1 -940 6845 6523 588 136 48 0 chr17 6679321 6679424 -82825129 + FRAM SINE Alu 69 176 0 319 148 0 0 chr17 6679428 6679482 -82825071 - L1MC3 LINE L1 -1635 6150 6097 2615 193 105 15 chr17 6679486 6679843 -82824710 - L1MC3 LINE L1 -1265 6520 6197 2084 106 3 3 chr17 6679843 6680135 -82824418 - AluSx SINE Alu -20 292 1 2615 193 105 15 chr17 6680135 6680166 -82824387 - L1MC3 LINE L1 -1588 6197 6170 1458 186 29 11 chr17 6680166 6680440 -82824113 + AluJo SINE Alu 1 279 -33 2615 193 105 15 chr17 6680440 6680728 -82823825 - L1MC3 LINE L1 -1615 6170 5782 2470 173 22 88 chr17 6680737 6680959 -82823594 - MER44D DNA MER2_type -1890 597 362 2051 93 3 45 chr17 6680959 6681270 -82823283 - AluY SINE Alu -13 298 1 2470 173 22 88 chr17 6681270 6681625 -82822928 - MER44D DNA MER2_type -2125 362 3 849 141 4 40 chr17 6681626 6681808 -82822745 - L1MC3 LINE L1 -560 5784 5606 2193 100 0 6 chr17 6681816 6682127 -82822426 + AluSq SINE Alu 5 313 0 5610 243 31 47 chr17 6682135 6682712 -82821841 - L1MC3 LINE L1 -8 7777 7193 2099 124 0 0 chr17 6682712 6683019 -82821534 - AluSx SINE Alu -5 307 1 5610 243 31 47 chr17 6683019 6684193 -82820360 - L1MC3 LINE L1 -592 7193 6053 771 250 72 19 chr17 6684210 6684474 -82820079 - L1ME3A LINE L1 -229 5941 5664 315 283 142 25 chr17 6684513 6684633 -82819920 - L1MEd LINE L1 -5967 152 19 188 353 25 49 chr17 6684706 6684828 -82819725 - MIR3 SINE MIR -75 133 15 224 303 0 15 chr17 6685053 6685119 -82819434 + GA-rich Low_complexity Low_complexity 1 65 0 664 311 78 91 chr17 6687074 6687181 -82817372 + L1M4 LINE L1 2142 2249 -3897 2126 103 7 3 chr17 6687181 6687483 -82817070 + AluSx SINE Alu 1 303 -9 664 311 78 91 chr17 6687483 6688179 -82816374 + L1M4 LINE L1 2249 2935 -3211 2029 71 0 15 chr17 6688192 6688459 -82816094 + AluY SINE Alu 1 263 -48 186 43 0 0 chr17 6688468 6688491 -82816062 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2072 129 0 0 chr17 6688515 6688809 -82815744 + AluSx SINE Alu 1 294 -18 711 325 57 61 chr17 6688813 6689238 -82815315 + L1M4 LINE L1 2956 3378 -2768 280 309 135 39 chr17 6689350 6689415 -82815138 + L2 LINE L2 922 979 -2335 2231 77 3 3 chr17 6689415 6689713 -82814840 - AluY SINE Alu -13 298 1 280 309 135 39 chr17 6689713 6689906 -82814647 + L2 LINE L2 979 1205 -2109 1572 224 132 50 chr17 6690073 6690574 -82813979 + MLT1F LTR MaLR 1 542 0 225 0 0 0 chr17 6690844 6690869 -82813684 + (TG)n Simple_repeat Simple_repeat 2 26 0 452 314 32 11 chr17 6690880 6691068 -82813485 - L1MC4 LINE L1 -130 7912 7721 714 179 0 0 chr17 6691504 6691621 -82812932 - AluJb SINE Alu -194 118 2 1107 228 104 31 chr17 6691760 6692146 -82812407 - L1MC4 LINE L1 -466 7576 7163 22 0 0 0 chr17 6692770 6692792 -82811761 + AT_rich Low_complexity Low_complexity 1 22 0 531 239 18 0 chr17 6693302 6693411 -82811142 - MER81 DNA DNA -3 111 1 201 74 0 0 chr17 6693685 6693712 -82810841 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 188 299 69 11 chr17 6693714 6693801 -82810752 + L2 LINE L2 1874 1965 -1349 383 259 36 67 chr17 6693803 6694027 -82810526 + L1M4 LINE L1 4229 4445 -1701 856 217 28 0 chr17 6694047 6694227 -82810326 - MER5A DNA MER1_type -4 185 1 461 309 130 30 chr17 6694274 6694743 -82809810 + L2 LINE L2 1982 2497 -817 422 304 8 16 chr17 6695318 6695443 -82809110 + MIR3 SINE MIR 82 205 -3 207 0 0 0 chr17 6695819 6695842 -82808711 + (CA)n Simple_repeat Simple_repeat 2 24 0 1929 212 28 42 chr17 6696129 6696323 -82808230 - L1ME2 LINE L1 -108 6056 5861 1924 131 3 13 chr17 6696323 6696629 -82807924 + AluSq SINE Alu 3 305 -8 1929 212 28 42 chr17 6696629 6696935 -82807618 - L1ME2 LINE L1 -303 5861 5563 199 279 295 23 chr17 6697472 6697601 -82806952 - MIR3 SINE MIR -29 179 16 3558 128 60 15 chr17 6697732 6698316 -82806237 - LTR31 LTR ERV1 -9 610 1 844 171 0 0 chr17 6699448 6699588 -82804965 - LTR31 LTR ERV1 -111 508 369 196 318 30 0 chr17 6700692 6700758 -82803795 - MIR3 SINE MIR -24 184 117 547 209 62 16 chr17 6701359 6701488 -82803065 - Tigger1 DNA MER2_type 0 2418 2284 2648 244 105 45 chr17 6701488 6702576 -82801977 - L1ME3 LINE L1 -275 5887 4866 180 0 0 0 chr17 6702576 6702596 -82801957 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2648 244 105 45 chr17 6702596 6702635 -82801918 - L1ME3 LINE L1 -1296 4866 4831 2770 10 0 0 chr17 6702635 6702946 -82801607 - AluYa5 SINE Alu 0 311 1 2648 244 105 45 chr17 6702946 6703652 -82800901 - L1ME3 LINE L1 -1331 4831 3923 1931 125 11 0 chr17 6703652 6703973 -82800580 + AluSx SINE Alu 1 324 0 2648 244 105 45 chr17 6703973 6704040 -82800513 - L1ME3 LINE L1 -2239 3923 3861 2115 109 3 13 chr17 6704972 6705259 -82799294 + AluSg SINE Alu 1 286 -24 207 0 0 0 chr17 6705259 6705282 -82799271 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 2115 109 3 13 chr17 6705282 6705307 -82799246 + AluSg SINE Alu 286 310 0 420 20 0 0 chr17 6706233 6706282 -82798271 + (TG)n Simple_repeat Simple_repeat 1 49 0 243 61 0 0 chr17 6706282 6706315 -82798238 + (TGG)n Simple_repeat Simple_repeat 3 35 0 289 309 90 51 chr17 6706315 6706626 -82797927 - L2 LINE L2 -337 2977 2655 275 275 297 0 chr17 6706602 6706666 -82797887 + MER5A DNA MER1_type 11 55 -134 * 2614 81 23 3 chr17 6706666 6707014 -82797539 - THE1A LTR MaLR 0 355 1 275 275 297 0 chr17 6707014 6707087 -82797466 + MER5A DNA MER1_type 55 189 0 213 362 26 9 chr17 6707116 6707232 -82797321 - L2 LINE L2 -639 2675 2558 276 233 93 35 chr17 6708353 6708439 -82796114 - L2 LINE L2 -40 3232 3142 225 298 54 127 chr17 6708798 6709184 -82795369 - L2 LINE L2 -94 3178 2821 193 332 142 40 chr17 6709717 6709970 -82794583 - L2 LINE L2 -99 3173 2895 644 204 0 0 chr17 6709999 6710112 -82794441 + Charlie3 DNA MER1_type 1 113 -2597 1962 126 0 16 chr17 6710112 6710429 -82794124 - AluSx SINE Alu 0 312 1 1651 274 88 32 chr17 6710440 6710791 -82793762 - L2 LINE L2 -243 3070 2740 2092 107 24 0 chr17 6710791 6711081 -82793472 + AluSx SINE Alu 1 297 -15 1651 274 88 32 chr17 6711081 6711438 -82793115 - L2 LINE L2 -573 2740 2316 643 290 71 25 chr17 6711773 6711914 -82792639 + MIR SINE MIR 4 162 -100 1317 145 114 77 chr17 6711914 6712266 -82792287 - MLT1A1 LTR MaLR 0 365 1 643 290 71 25 chr17 6712266 6712362 -82792191 + MIR SINE MIR 162 252 -10 2058 121 3 0 chr17 6712393 6712690 -82791863 - AluSq SINE Alu -15 298 1 376 236 13 66 chr17 6713429 6713586 -82790967 + MIR SINE MIR 2 147 -65 1786 170 61 86 chr17 6714081 6714331 -82790222 - MSTB LTR MaLR -7 419 183 2196 101 0 3 chr17 6714331 6714628 -82789925 - AluSx SINE Alu -16 296 1 1786 170 61 86 chr17 6714628 6714806 -82789747 - MSTB LTR MaLR -243 183 2 213 220 51 17 chr17 6715291 6715350 -82789203 - MIR SINE MIR -109 153 93 584 317 58 24 chr17 6716126 6716331 -82788222 - MIR SINE MIR -23 239 28 1894 112 0 0 chr17 6716363 6716631 -82787922 - AluSc SINE Alu 0 309 42 209 238 16 48 chr17 6716974 6717037 -82787516 - L2 LINE L2 -80 3192 3132 1579 225 71 88 chr17 6717179 6717744 -82786809 + MER68 LTR ERV1 2 556 -6 235 316 125 45 chr17 6717753 6718135 -82786418 - L2 LINE L2 -264 3008 2597 1254 151 18 18 chr17 6718370 6718588 -82785965 + MER20 DNA MER1_type 1 218 -1 850 194 15 63 chr17 6718598 6718804 -82785749 + MER3 DNA MER1_type 2 197 -12 534 299 0 7 chr17 6719520 6719667 -82784886 - MIR SINE MIR -95 167 22 2135 117 0 0 chr17 6719668 6719966 -82784587 - AluSx SINE Alu -14 298 1 790 226 26 15 chr17 6720594 6720789 -82783764 - MER117 DNA MER1_type 0 197 1 386 217 11 22 chr17 6720981 6721073 -82783480 - L3 LINE CR1 -97 1480 1390 2296 88 0 0 chr17 6721239 6721545 -82783008 + AluY SINE Alu 1 306 -5 338 250 105 24 chr17 6721586 6721710 -82782843 - L3 LINE CR1 -197 1380 1247 352 275 0 55 chr17 6721916 6722025 -82782528 - L2 LINE L2 -1 3271 3169 303 253 0 58 chr17 6722305 6722343 -82782210 - L1MC4 LINE L1 -1349 6693 6654 1782 114 3 50 chr17 6722343 6722670 -82781883 - AluSx SINE Alu 0 313 1 303 253 0 58 chr17 6722670 6722717 -82781836 - L1MC4 LINE L1 -1388 6654 6612 235 101 13 51 chr17 6722769 6722848 -82781705 + (TA)n Simple_repeat Simple_repeat 2 77 0 2351 167 38 38 chr17 6722850 6723353 -82781200 - L1MB4 LINE L1 -33 6147 5645 1844 173 39 33 chr17 6723417 6723801 -82780752 + MLT1B LTR MaLR 1 418 -8 21 0 0 0 chr17 6723863 6723884 -82780669 + AT_rich Low_complexity Low_complexity 1 21 0 828 173 0 0 chr17 6723933 6724066 -82780487 - FLAM_C SINE Alu 0 133 1 536 283 110 25 chr17 6724296 6724614 -82779939 - L1M4 LINE L1 -1295 4851 4507 22 0 0 0 chr17 6724630 6724652 -82779901 + AT_rich Low_complexity Low_complexity 1 22 0 669 311 161 40 chr17 6724690 6725055 -82779498 - L2 LINE L2 -359 2955 2513 2062 78 35 3 chr17 6725055 6725338 -82779215 + AluSg1 SINE Alu 1 292 -17 669 311 161 40 chr17 6725338 6725470 -82779083 - L2 LINE L2 -801 2513 2398 761 126 0 0 chr17 6726472 6726591 -82777962 + AluSg/x SINE Alu 193 311 -1 2069 116 7 3 chr17 6727790 6728092 -82776461 - AluSg SINE Alu -7 303 1 401 66 16 0 chr17 6728143 6728204 -82776349 + (GA)n Simple_repeat Simple_repeat 2 63 0 637 281 38 19 chr17 6728527 6728737 -82775816 - MIR SINE MIR -3 259 46 483 243 215 0 chr17 6728916 6729060 -82775493 - MER45A DNA AcHobo 0 178 4 217 0 0 0 chr17 6729407 6729431 -82775122 + (TTTTC)n Simple_repeat Simple_repeat 2 55 0 946 140 21 0 chr17 6729431 6729574 -82774979 - AluSg/x SINE Alu -1 305 137 271 376 0 32 chr17 6730444 6730630 -82773923 + (TG)n Simple_repeat Simple_repeat 1 180 0 * 282 294 39 0 chr17 6730543 6730645 -82773908 + (TATATG)n Simple_repeat Simple_repeat 2 107 0 2029 123 34 3 chr17 6730724 6731016 -82773537 + AluSx SINE Alu 1 301 -11 303 242 78 47 chr17 6732726 6732854 -82771699 - L2 LINE L2 -7 3265 3134 246 183 0 0 chr17 6732990 6733047 -82771506 - MIR SINE MIR -65 143 96 393 22 0 0 chr17 6733124 6733170 -82771383 + (TG)n Simple_repeat Simple_repeat 2 47 0 2146 90 0 4 chr17 6733170 6733437 -82771116 - AluSq SINE Alu -26 287 22 527 261 55 12 chr17 6734036 6734201 -82770352 + MIR SINE MIR 47 218 -44 2459 56 0 0 chr17 6734513 6734885 -82769668 + AluY SINE Alu 1 372 0 1428 229 8 43 chr17 6735760 6736008 -82768545 + L1MD3 LINE L1 7634 7866 -129 2064 149 0 0 chr17 6736008 6736297 -82768256 + AluSx SINE Alu 1 289 -23 1428 229 8 43 chr17 6736297 6736420 -82768133 + L1MD3 LINE L1 7866 7992 -3 347 329 87 0 chr17 6737089 6737238 -82767315 - MIR3 SINE MIR -30 178 17 288 266 133 90 chr17 6738080 6738358 -82766195 - L2 LINE L2 -2 3311 3022 182 372 0 39 chr17 6738383 6738461 -82766092 + L3 LINE CR1 398 472 -1105 * 332 341 66 24 chr17 6738456 6738623 -82765930 - MIR SINE MIR 0 262 89 302 302 145 17 chr17 6738703 6738875 -82765678 + L3 LINE CR1 473 666 -911 356 318 55 28 chr17 6738920 6739137 -82765416 + L2 LINE L2 2836 3058 -214 384 40 0 0 chr17 6739178 6739228 -82765325 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 539 267 136 30 chr17 6739230 6739742 -82764811 + MLT1L LTR MaLR 10 615 0 180 354 154 15 chr17 6739777 6739907 -82764646 + L2 LINE L2 3124 3271 -1 603 244 60 0 chr17 6740825 6740993 -82763560 + MER45A DNA AcHobo 1 178 0 366 23 0 0 chr17 6741728 6741771 -82762782 + (TG)n Simple_repeat Simple_repeat 1 43 0 207 0 0 0 chr17 6741770 6741793 -82762760 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 377 39 20 0 chr17 6742116 6742167 -82762386 + (TG)n Simple_repeat Simple_repeat 2 53 0 216 0 0 0 chr17 6742495 6742519 -82762034 + (TG)n Simple_repeat Simple_repeat 2 25 0 22 94 0 0 chr17 6742585 6742649 -82761904 + GC_rich Low_complexity Low_complexity 1 64 0 22 56 0 0 chr17 6742673 6742709 -82761844 + GC_rich Low_complexity Low_complexity 1 36 0 228 75 38 38 chr17 6742731 6742784 -82761769 + (CCCG)n Simple_repeat Simple_repeat 2 54 0 231 245 9 38 chr17 6743155 6743261 -82761292 + G-rich Low_complexity Low_complexity 2 104 0 2087 151 3 6 chr17 6745694 6746006 -82758547 + AluSx SINE Alu 1 311 -1 318 299 19 0 chr17 6746242 6746349 -82758204 + MIR SINE MIR 78 186 -76 310 340 70 19 chr17 6748480 6748695 -82755858 + MIR SINE MIR 29 254 -8 241 286 103 40 chr17 6749243 6749369 -82755184 - L2 LINE L2 -1 3271 3138 2378 98 3 0 chr17 6749443 6749740 -82754813 - AluSc SINE Alu -11 298 1 422 370 65 27 chr17 6750533 6750871 -82753682 - L2 LINE L2 0 3272 2922 288 170 0 0 chr17 6750917 6750970 -82753583 + (TG)n Simple_repeat Simple_repeat 1 53 0 551 291 56 39 chr17 6750982 6751216 -82753337 - L2 LINE L2 -451 2863 2626 604 290 50 23 chr17 6752186 6752407 -82752146 + MIR SINE MIR 13 239 -23 567 264 63 6 chr17 6752466 6752625 -82751928 - MIR SINE MIR -71 191 24 22 42 0 0 chr17 6753310 6753334 -82751219 + GC_rich Low_complexity Low_complexity 1 24 0 2208 107 20 3 chr17 6753804 6754102 -82750451 + AluSx SINE Alu 1 303 -9 692 221 28 17 chr17 6754198 6754379 -82750174 + MER5A DNA MER1_type 2 184 -5 321 197 13 26 chr17 6754495 6754571 -82749982 - MIR SINE MIR -102 160 86 974 208 36 5 chr17 6754574 6754795 -82749758 - LTR16C LTR ERVL -2 489 262 210 353 69 28 chr17 6755097 6755315 -82749238 - L2 LINE L2 -429 2885 2659 281 167 45 30 chr17 6755860 6755926 -82748627 - AluS SINE Alu -237 71 5 897 73 0 9 chr17 6755927 6756036 -82748517 + AluSx SINE Alu 46 153 -159 2277 109 3 0 chr17 6756161 6756465 -82748088 - AluSq SINE Alu -5 308 4 1493 109 37 251 chr17 6756470 6756857 -82747696 + Tigger3(Golem) DNA MER2_type 2497 2679 -350 2376 70 0 10 chr17 6756857 6757157 -82747396 - AluY SINE Alu -14 297 1 1493 109 37 251 chr17 6757157 6757446 -82747107 + Tigger3(Golem) DNA MER2_type 2679 3028 -1 435 309 94 43 chr17 6757508 6757829 -82746724 - L1MDa LINE L1 -3936 2604 2355 1092 215 0 0 chr17 6758087 6758282 -82746271 - MLT1A1 LTR MaLR -2 363 169 333 250 0 0 chr17 6758272 6758340 -82746213 - MLT1A1 LTR MaLR -129 236 169 * 333 250 0 0 chr17 6758330 6758398 -82746155 - MLT1A1 LTR MaLR -129 236 169 * 1314 153 49 5 chr17 6758388 6758611 -82745942 - MLT1A1 LTR MaLR -129 236 4 206 290 138 21 chr17 6758805 6758950 -82745603 - L3 LINE CR1 -108 1469 1308 387 295 12 66 chr17 6759771 6759937 -82744616 + MIR3 SINE MIR 33 189 -19 2634 65 0 0 chr17 6760164 6760471 -82744082 - AluY SINE Alu -4 307 1 237 109 0 43 chr17 6760512 6760558 -82743995 - MIR SINE MIR -102 160 117 315 322 48 7 chr17 6760625 6760771 -82743782 - MIR SINE MIR -99 163 12 435 197 0 0 chr17 6761033 6761109 -82743444 - MER63 DNA MER1_type -84 752 677 593 273 163 22 chr17 6761621 6761984 -82742569 + L2 LINE L2 2899 3312 -1 301 310 56 56 chr17 6762080 6762293 -82742260 + MIR SINE MIR 27 239 -23 683 205 0 18 chr17 6762609 6762775 -82741778 - L1MB5 LINE L1 0 6174 6012 984 181 78 21 chr17 6762790 6763033 -82741520 - L1MD3 LINE L1 -9 7986 7730 499 328 104 27 chr17 6763342 6763717 -82740836 - MLT1I LTR MaLR -1 408 5 2202 107 7 3 chr17 6764089 6764388 -82740165 - AluSc SINE Alu -9 300 1 789 263 109 63 chr17 6764437 6764851 -82739702 + MLT1D LTR MaLR 1 433 -72 254 301 21 11 chr17 6765313 6765406 -82739147 + MIR SINE MIR 30 123 -85 21 0 0 0 chr17 6765643 6765664 -82738889 + AT_rich Low_complexity Low_complexity 1 21 0 2206 119 0 0 chr17 6765747 6766040 -82738513 - AluSx SINE Alu -19 293 1 254 301 42 42 chr17 6766049 6766192 -82738361 + L2 LINE L2 3169 3311 -2 1641 260 47 57 chr17 6766912 6767511 -82737042 - MLT1E LTR MaLR 0 593 1 198 71 0 0 chr17 6768432 6768460 -82736093 + (TC)n Simple_repeat Simple_repeat 1 28 0 1177 130 5 31 chr17 6769581 6769755 -82734798 - AluJb SINE Alu -4 308 138 2140 133 0 3 chr17 6769755 6770049 -82734504 - AluSx SINE Alu -19 293 1 1177 130 5 31 chr17 6770049 6770066 -82734487 - AluJb SINE Alu -174 138 122 320 232 12 49 chr17 6770171 6770253 -82734300 - L1MC4 LINE L1 -1355 6687 6609 484 294 33 80 chr17 6770612 6770735 -82733818 - L1MC4 LINE L1 -2031 5777 5650 2311 97 13 7 chr17 6770735 6771043 -82733510 - AluSg SINE Alu 0 310 1 484 294 33 80 chr17 6771043 6771280 -82733273 - L1MC4 LINE L1 -2158 5650 5434 505 302 34 44 chr17 6772037 6772136 -82732417 - MIR SINE MIR -3 259 160 2194 113 0 13 chr17 6772136 6772437 -82732116 - AluSq SINE Alu -16 297 1 505 302 34 44 chr17 6772437 6772595 -82731958 - MIR SINE MIR -102 160 5 484 319 28 66 chr17 6773092 6773412 -82731141 + L2 LINE L2 2932 3239 -33 1245 109 0 40 chr17 6773421 6773596 -82730957 + AluSx SINE Alu 1 168 -144 446 298 4 8 chr17 6773696 6773931 -82730622 - AluSq SINE Alu -77 236 3 1782 142 0 77 chr17 6774001 6774324 -82730229 - AluSx SINE Alu -12 300 3 340 380 62 6 chr17 6774616 6774795 -82729758 - HAL1 LINE L1 -710 1797 1609 1936 142 48 0 chr17 6775270 6775565 -82728988 + AluSc SINE Alu 1 309 0 194 289 96 0 chr17 6775938 6776021 -82728532 - L2 LINE L2 0 3272 3182 372 266 49 21 chr17 6776031 6776174 -82728379 + MIR3 SINE MIR 4 150 -58 362 237 105 48 chr17 6776226 6776452 -82728101 - MIR SINE MIR -2 260 19 2192 136 0 0 chr17 6776479 6776788 -82727765 - AluSx SINE Alu 0 312 4 300 349 71 0 chr17 6777190 6777316 -82727237 - MIR3 SINE MIR -25 183 49 868 217 4 71 chr17 6777429 6777669 -82726884 - MER58A DNA MER1_type 0 224 1 340 346 82 22 chr17 6777723 6777905 -82726648 + L2 LINE L2 3079 3271 -1 513 182 0 0 chr17 6778252 6778351 -82726202 + (TG)n Simple_repeat Simple_repeat 2 100 0 805 166 0 45 chr17 6778363 6778520 -82726033 + MLT1B LTR MaLR 34 183 -207 767 176 36 24 chr17 6778501 6778666 -82725887 + MLT1B LTR MaLR 298 464 -3 * 2275 88 7 7 chr17 6779468 6779763 -82724790 + AluSg SINE Alu 5 299 -11 733 252 18 91 chr17 6780021 6780295 -82724258 + MIR SINE MIR 9 262 0 303 258 0 0 chr17 6780765 6780831 -82723722 - MIR SINE MIR -65 143 78 364 324 27 60 chr17 6781416 6781601 -82722952 + MIR3 SINE MIR 3 181 -27 268 356 11 0 chr17 6781952 6782039 -82722514 - L2 LINE L2 -64 3208 3121 312 294 117 22 chr17 6782879 6783059 -82721494 - LTR16A1 LTR ERVL -93 364 168 366 80 0 0 chr17 6784159 6784209 -82720344 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 351 271 202 26 chr17 6784240 6784763 -82719790 - L2 LINE L2 -95 3218 2602 387 325 0 4 chr17 6785443 6785679 -82718874 + (CA)n Simple_repeat Simple_repeat 1 234 0 195 42 0 0 chr17 6786232 6786256 -82718297 + (TCCA)n Simple_repeat Simple_repeat 1 24 0 389 317 26 118 chr17 6787156 6787462 -82717091 - L2 LINE L2 -19 3253 2976 330 270 117 55 chr17 6787625 6787953 -82716600 + L1MC5 LINE L1 1958 8032 -209 24 53 0 0 chr17 6787966 6788004 -82716549 + AT_rich Low_complexity Low_complexity 1 38 0 310 293 40 67 chr17 6788445 6788698 -82715855 - L2 LINE L2 -1230 2084 1839 274 215 124 41 chr17 6789436 6789557 -82714996 + MLT1H LTR MaLR 408 538 -11 481 282 28 21 chr17 6790644 6790786 -82713767 + MIR SINE MIR 61 203 -59 235 118 0 0 chr17 6790789 6790823 -82713730 + MLT1L LTR MaLR 4 37 -578 474 279 61 92 chr17 6790866 6790936 -82713617 + MLT1J LTR MaLR 111 182 -329 1824 93 61 83 chr17 6790936 6791248 -82713305 + AluSq SINE Alu 1 305 -8 474 279 61 92 chr17 6791248 6791589 -82712964 + MLT1J LTR MaLR 182 509 -2 2184 119 3 7 chr17 6791707 6792017 -82712536 - AluSg SINE Alu -1 309 1 206 281 0 18 chr17 6792042 6792099 -82712454 - L2 LINE L2 -224 3048 2993 948 239 93 89 chr17 6792983 6793081 -82711472 - MLT1H1 LTR MaLR -10 545 449 2359 113 0 3 chr17 6793081 6793391 -82711162 + AluSq SINE Alu 1 309 -4 948 239 93 89 chr17 6793391 6793867 -82710686 - MLT1H1 LTR MaLR -106 449 1 224 319 43 21 chr17 6795229 6795323 -82709230 + MIR SINE MIR 157 252 -10 610 139 14 36 chr17 6797571 6797857 -82706696 + GA-rich Low_complexity Low_complexity 1 279 0 1080 210 47 0 chr17 6799114 6799328 -82705225 - MIR SINE MIR -12 250 27 205 216 39 0 chr17 6800237 6800288 -82704265 + GA-rich Low_complexity Low_complexity 4 56 0 731 303 138 24 chr17 6800527 6800867 -82703686 - L1MC4a LINE L1 -1908 5900 5522 1990 131 0 67 chr17 6800992 6801320 -82703233 - AluJo SINE Alu -6 306 1 256 189 98 82 chr17 6802164 6802286 -82702267 + LTR9 LTR ERV1 1 124 -488 1958 107 0 36 chr17 6802287 6802595 -82701958 + AluSc SINE Alu 1 297 -12 2242 177 46 13 chr17 6802598 6803056 -82701497 + LTR9B LTR ERV1 170 642 -2 1049 183 48 5 chr17 6803675 6803883 -82700670 - MER20 DNA MER1_type 0 219 3 516 187 90 8 chr17 6804274 6804408 -82700145 + L1ME4a LINE L1 5734 5878 -243 478 247 13 83 chr17 6805849 6806098 -82698455 - L1MC/D LINE L1 -385 5736 5565 386 350 19 31 chr17 6806123 6806283 -82698270 + MIR SINE MIR 28 185 -77 2351 134 39 17 chr17 6807028 6807438 -82697115 - MSTB LTR MaLR 0 426 8 242 272 177 44 chr17 6807439 6807597 -82696956 - MIR3 SINE MIR -27 181 3 684 241 70 10 chr17 6809105 6809304 -82695249 - L2 LINE L2 -222 3091 2881 1914 166 33 14 chr17 6809317 6809594 -82694959 - MLT1B LTR MaLR -16 374 87 2117 117 0 0 chr17 6809594 6809876 -82694677 + AluSx SINE Alu 23 304 -8 1914 166 33 14 chr17 6809876 6809965 -82694588 - MLT1B LTR MaLR -303 87 1 413 257 182 14 chr17 6810951 6811099 -82693454 - MIR SINE MIR -34 228 56 231 286 0 0 chr17 6812984 6813040 -82691513 + MIR SINE MIR 92 147 -61 236 179 0 0 chr17 6813385 6813424 -82691129 - MER5A DNA MER1_type 0 189 151 2333 192 11 45 chr17 6813478 6813771 -82690782 + L1MA5 LINE L1 1356 1621 -5168 2480 95 3 0 chr17 6813771 6814076 -82690477 + AluSq SINE Alu 1 306 -7 2333 192 11 45 chr17 6814076 6814356 -82690197 + L1MA5 LINE L1 1621 1909 -4880 230 217 0 0 chr17 6814356 6814402 -82690151 - L1M2c LINE L1 -4844 1945 1900 * 995 168 20 0 chr17 6814400 6814603 -82689950 + L1MA5 LINE L1 3600 3806 -2982 * 7454 130 22 36 chr17 6814583 6817017 -82687536 + L1MA5 LINE L1 4552 6940 -2 25 23 0 23 chr17 6817017 6817035 -82687518 + AT_rich Low_complexity Low_complexity 1 18 -24 2637 80 0 8 chr17 6817035 6817398 -82687155 - L1PA8 LINE L1 0 6172 5813 25 23 0 23 chr17 6817398 6817422 -82687131 + AT_rich Low_complexity Low_complexity 18 42 0 550 205 17 8 chr17 6817437 6817554 -82686999 - MER5A DNA MER1_type -63 126 9 2090 131 3 31 chr17 6817941 6818262 -82686291 - AluSx SINE Alu 0 312 1 213 39 0 0 chr17 6818769 6818795 -82685758 + (CA)n Simple_repeat Simple_repeat 1 26 0 280 298 177 56 chr17 6819308 6819523 -82685030 + L2 LINE L2 3029 3269 -3 267 247 26 26 chr17 6819880 6819957 -82684596 + MIR SINE MIR 56 132 -130 1501 195 35 57 chr17 6821206 6821575 -82682978 - MLT1A2 LTR MaLR 0 374 14 218 360 45 0 chr17 6821743 6821854 -82682699 - L2 LINE L2 -2 3270 3155 307 319 18 26 chr17 6822083 6822196 -82682357 + MIR SINE MIR 37 148 -114 255 257 140 27 chr17 6826283 6826422 -82678131 + MIR SINE MIR 5 153 -55 657 329 40 40 chr17 6826514 6826943 -82677610 + MLT1K LTR MaLR 138 566 -22 198 286 71 14 chr17 6827217 6827287 -82677266 - MIR SINE MIR -70 192 119 685 59 29 0 chr17 6827530 6827632 -82676921 + (TTTC)n Simple_repeat Simple_repeat 3 107 0 839 145 0 0 chr17 6827632 6827749 -82676804 - FLAM_C SINE Alu -26 117 1 434 310 103 17 chr17 6827755 6827797 -82676756 - MIR SINE MIR -56 206 169 1266 242 102 50 chr17 6827797 6828277 -82676276 + MLT1D LTR MaLR 1 505 0 434 310 103 17 chr17 6828277 6828408 -82676145 - MIR SINE MIR -93 169 18 734 283 5 50 chr17 6828440 6828659 -82675894 + MIR SINE MIR 33 241 -21 888 216 64 5 chr17 6828752 6828956 -82675597 - MER20 DNA MER1_type 0 219 4 349 340 31 13 chr17 6829187 6829211 -82675342 + MIR SINE MIR 100 122 -140 6840 60 33 1 chr17 6829211 6830137 -82674416 + L1PA8 LINE L1 5218 6171 -1 349 340 31 13 chr17 6830137 6830271 -82674282 + MIR SINE MIR 122 261 -1 324 250 9 56 chr17 6830745 6830853 -82673700 + MIR SINE MIR 20 122 -86 4780 58 15 5 chr17 6831227 6831835 -82672718 - L1PA7 LINE L1 -1 6153 5540 367 319 26 0 chr17 6831883 6831990 -82672563 - MIR SINE MIR -77 185 76 271 227 0 113 chr17 6831990 6832087 -82672466 + MER91B DNA MER1_type 1 86 -104 1811 203 43 57 chr17 6832569 6833076 -82671477 - MLT1D LTR MaLR -3 502 3 1952 130 3 7 chr17 6833791 6834075 -82670478 + AluSq SINE Alu 1 283 -30 243 0 0 0 chr17 6834078 6834105 -82670448 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 262 294 17 84 chr17 6835420 6835539 -82669014 + MIR SINE MIR 46 156 -106 185 339 0 0 chr17 6836130 6836195 -82668358 + MIR SINE MIR 11 75 -187 23 0 0 0 chr17 6836299 6836322 -82668231 + AT_rich Low_complexity Low_complexity 1 23 0 355 231 0 13 chr17 6836337 6836415 -82668138 + MIR3 SINE MIR 115 191 -17 2069 126 3 10 chr17 6836581 6836882 -82667671 + AluSx SINE Alu 1 299 -13 333 210 6 160 chr17 6838197 6838378 -82666175 + HAL1b LINE L1 1185 1337 -11 516 252 10 57 chr17 6839361 6839552 -82665001 - MIR SINE MIR -6 256 73 287 272 0 43 chr17 6839792 6839884 -82664669 - MLT1H LTR MaLR -415 134 47 191 299 72 31 chr17 6840588 6840685 -82663868 + MIR3 SINE MIR 105 205 -3 338 264 223 34 chr17 6841038 6841103 -82663450 + MER5A DNA MER1_type 13 64 -125 2099 121 10 20 chr17 6841103 6841408 -82663145 + AluSx SINE Alu 1 302 -10 338 264 223 34 chr17 6841408 6841490 -82663063 + MER5A DNA MER1_type 64 188 -1 616 269 106 56 chr17 6841493 6841691 -82662862 + LTR16C LTR ERVL 2 189 -302 2252 201 82 46 chr17 6841691 6842254 -82662299 - MER119 DNA MER1_type 0 583 1 616 269 106 56 chr17 6842254 6842519 -82662034 + LTR16C LTR ERVL 189 488 -3 212 291 103 0 chr17 6842547 6842664 -82661889 - L2 LINE L2 -673 2641 2513 254 324 67 9 chr17 6843276 6843381 -82661172 - MIR SINE MIR -70 192 82 * 289 283 204 16 chr17 6843365 6843488 -82661065 - L2 LINE L2 -4 3309 3210 1690 111 134 0 chr17 6843488 6843750 -82660803 + AluY SINE Alu 1 297 -4 289 283 204 16 chr17 6843750 6843817 -82660736 - L2 LINE L2 -103 3210 3083 1756 244 42 33 chr17 6845225 6845747 -82658806 - MER74B LTR ERVL -58 564 35 2738 84 5 22 chr17 6845747 6846117 -82658436 - THE1B LTR MaLR 0 364 1 1756 244 42 33 chr17 6846117 6846144 -82658409 - MER74B LTR ERVL -587 35 10 484 314 73 16 chr17 6846148 6846393 -82658160 + L2 LINE L2 2867 3125 -188 441 299 208 28 chr17 6846583 6847266 -82657287 + L2 LINE L2 2172 2977 -337 215 61 30 0 chr17 6848012 6848045 -82656508 + (TC)n Simple_repeat Simple_repeat 2 35 0 384 303 35 14 chr17 6848597 6848739 -82655814 - L3 LINE CR1 -86 1491 1347 581 296 38 32 chr17 6848884 6849070 -82655483 - MIR SINE MIR -3 259 73 219 354 53 18 chr17 6849242 6849355 -82655198 + L2 LINE L2 3122 3238 -34 327 317 57 16 chr17 6849519 6849642 -82654911 + MIR3 SINE MIR 6 133 -75 387 233 25 42 chr17 6850102 6850222 -82654331 + L2 LINE L2 1371 1488 -1826 204 282 39 39 chr17 6850576 6850654 -82653899 - MIR SINE MIR -103 105 28 690 263 59 0 chr17 6850943 6851129 -82653424 + MLT1F LTR MaLR 9 205 -337 644 113 0 120 chr17 6851129 6851262 -82653291 - SVA Other Other -406 980 864 263 250 0 36 chr17 6851270 6851354 -82653199 + MLT1F LTR MaLR 216 296 -246 1190 209 25 53 chr17 6851354 6851425 -82653128 - MLT1A1 LTR MaLR 0 365 294 1458 180 3 25 chr17 6851425 6851741 -82652812 + AluSq SINE Alu 2 310 -3 1190 209 25 53 chr17 6851741 6851990 -82652563 - MLT1A1 LTR MaLR -71 294 54 818 166 140 47 chr17 6852204 6852439 -82652114 + MLT1F LTR MaLR 286 542 0 212 253 0 27 chr17 6853512 6853587 -82650966 + L2 LINE L2 3015 3087 -185 250 216 57 45 chr17 6854118 6854206 -82650347 + L3 LINE CR1 575 663 -914 509 303 88 43 chr17 6855437 6855481 -82649072 - L1ME4a LINE L1 -233 5888 5847 2245 102 3 10 chr17 6855481 6855784 -82648769 + AluY SINE Alu 1 301 -10 509 303 88 43 chr17 6855784 6856205 -82648348 - L1ME4a LINE L1 -274 5847 5402 1205 187 20 24 chr17 6856289 6856535 -82648018 - L1PB4 LINE L1 -2 6154 5910 417 182 11 0 chr17 6856535 6856623 -82647930 + L1PB4 LINE L1 5762 5850 -306 2323 113 0 0 chr17 6856644 6856953 -82647600 - AluSg SINE Alu -1 309 1 3692 152 7 8 chr17 6857013 6857627 -82646926 - L1PA16 LINE L1 0 6166 5554 504 200 0 23 chr17 6857629 6857759 -82646794 + L1 LINE L1 3209 3335 -2811 5744 170 20 44 chr17 6857869 6859344 -82645209 + L1P4 LINE L1 3994 5429 -737 1603 141 0 72 chr17 6859344 6859667 -82644886 + AluSx SINE Alu 31 312 0 5744 170 20 44 chr17 6859667 6859729 -82644824 + L1P4 LINE L1 5429 5491 -675 320 267 14 62 chr17 6860279 6860425 -82644128 - LTR33 LTR ERVL -28 493 355 1406 213 92 77 chr17 6860425 6860903 -82643650 + MLT1E LTR MaLR 1 485 -108 210 108 0 54 chr17 6860917 6860932 -82643621 + (GAAAA)n Simple_repeat Simple_repeat 2 16 -20 2008 113 0 31 chr17 6860932 6861252 -82643301 + AluSg SINE Alu 1 310 0 210 108 0 54 chr17 6861252 6861273 -82643280 + (GAAAA)n Simple_repeat Simple_repeat 16 36 0 1452 185 122 24 chr17 6861771 6862100 -82642453 + MLT1A1 LTR MaLR 5 365 0 211 261 89 19 chr17 6862227 6862332 -82642221 - MIR3 SINE MIR -38 170 56 198 71 0 0 chr17 6862645 6862673 -82641880 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 380 274 82 30 chr17 6863282 6863417 -82641136 + MIR3 SINE MIR 67 208 0 2048 156 0 13 chr17 6863431 6863739 -82640814 + AluJb SINE Alu 1 304 -8 2359 79 0 0 chr17 6863816 6864120 -82640433 - AluY SINE Alu -7 304 1 26 64 0 0 chr17 6864300 6864347 -82640206 + AT_rich Low_complexity Low_complexity 1 47 0 464 290 121 22 chr17 6864727 6864958 -82639595 + MIR SINE MIR 5 258 -4 402 57 0 0 chr17 6864995 6865048 -82639505 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 220 344 32 43 chr17 6865052 6865145 -82639408 - L2 LINE L2 -16 3297 3206 333 247 26 0 chr17 6865505 6865582 -82638971 + MIR SINE MIR 163 241 -21 2389 98 0 0 chr17 6866027 6866322 -82638231 + AluSg SINE Alu 1 295 -15 185 323 141 10 chr17 6867367 6867466 -82637087 + MIR SINE MIR 36 147 -61 808 171 0 0 chr17 6867470 6867587 -82636966 + FLAM_C SINE Alu 1 117 -26 712 57 29 0 chr17 6867587 6867692 -82636861 + (GAAA)n Simple_repeat Simple_repeat 3 110 0 792 272 62 49 chr17 6867942 6868310 -82636243 + MLT1H LTR MaLR 29 401 -148 486 228 0 0 chr17 6869005 6869163 -82635390 + (ATG)n Simple_repeat Simple_repeat 1 158 0 252 100 0 0 chr17 6869171 6869211 -82635342 + (ATGGTG)n Simple_repeat Simple_repeat 1 40 0 411 367 82 46 chr17 6869307 6869699 -82634854 + L2 LINE L2 2866 3271 -1 222 37 0 0 chr17 6870306 6870333 -82634220 + (CA)n Simple_repeat Simple_repeat 2 28 0 517 292 56 34 chr17 6870742 6870920 -82633633 - MIR SINE MIR -12 250 69 664 288 50 42 chr17 6871508 6872005 -82632548 - L1M4 LINE L1 -2930 3216 2716 328 283 20 30 chr17 6872107 6872206 -82632347 - L1M4 LINE L1 -3600 2546 2449 3259 133 8 10 chr17 6872277 6872789 -82631764 + Tigger3b DNA MER2_type 1 511 -720 495 285 18 18 chr17 6872903 6873068 -82631485 + MER90 LTR ERV1 445 609 -5 209 269 0 0 chr17 6873890 6873942 -82630611 + (CA)n Simple_repeat Simple_repeat 2 53 0 340 236 73 41 chr17 6874197 6874320 -82630233 + L2 LINE L2 2964 3090 -182 947 258 70 54 chr17 6874379 6874806 -82629747 - MLT1J LTR MaLR -8 503 70 2075 118 17 10 chr17 6874817 6875113 -82629440 + AluSq SINE Alu 1 298 -15 376 194 0 58 chr17 6875506 6875609 -82628944 + LTR67 LTR ERVL 458 554 -3 698 151 8 0 chr17 6875669 6875788 -82628765 - L1MA4 LINE L1 -6 6294 6175 1905 134 0 7 chr17 6876146 6876465 -82628088 + AluSc SINE Alu 1 317 0 2646 211 25 13 chr17 6877301 6877330 -82627223 + MER68 LTR ERV1 1 28 -534 1803 135 4 4 chr17 6877330 6877632 -82626921 - AluSq SINE Alu 0 319 18 2646 211 25 13 chr17 6877632 6878156 -82626397 + MER68 LTR ERV1 28 562 0 605 167 0 0 chr17 6878693 6878795 -82625758 + U6 snRNA snRNA 1 102 -5 2472 62 0 0 chr17 6878795 6879087 -82625466 - AluY SINE Alu -19 292 1 458 150 40 30 chr17 6879105 6879205 -82625348 + L1MA6 LINE L1 6200 6300 0 386 252 84 15 chr17 6879303 6879434 -82625119 - MIR SINE MIR -115 147 8 2152 127 17 0 chr17 6879995 6880295 -82624258 + AluSg SINE Alu 1 305 -5 375 23 0 0 chr17 6880312 6880356 -82624197 + (GGA)n Simple_repeat Simple_repeat 1 44 0 609 310 56 19 chr17 6880716 6880984 -82623569 - L1ME1 LINE L1 -4 6162 5885 187 220 51 51 chr17 6881387 6881446 -82623107 - L2 LINE L2 -54 3218 3160 768 186 11 57 chr17 6881895 6882072 -82622481 - MER5B DNA MER1_type -9 169 1 559 316 36 0 chr17 6883227 6883395 -82621158 + MIR SINE MIR 89 262 0 406 334 37 62 chr17 6883455 6883793 -82620760 - L1MEc LINE L1 -3787 2428 2140 25 0 0 0 chr17 6884586 6884611 -82619942 + AT_rich Low_complexity Low_complexity 1 25 0 2319 97 20 0 chr17 6884861 6885160 -82619393 - AluSg SINE Alu -5 305 1 306 281 238 5 chr17 6885527 6885712 -82618841 + L3 LINE CR1 1261 1488 -89 2049 145 0 3 chr17 6886256 6886559 -82617994 - AluSc SINE Alu -7 302 1 2325 110 7 0 chr17 6887901 6888211 -82616342 + AluSx SINE Alu 1 312 0 1799 106 0 8 chr17 6888403 6888639 -82615914 - AluSg SINE Alu -16 294 61 225 250 0 36 chr17 6888678 6888762 -82615791 + (TA)n Simple_repeat Simple_repeat 1 81 0 369 335 56 63 chr17 6889041 6889328 -82615225 - L1 LINE L1 -853 5293 5009 935 315 195 25 chr17 6889366 6890059 -82614494 + L2 LINE L2 2149 2959 -355 441 109 0 0 chr17 6890084 6890148 -82614405 - AluSp/q SINE Alu -13 300 237 983 106 15 0 chr17 6890344 6890476 -82614077 + AluY SINE Alu 1 134 -177 2282 92 7 3 chr17 6890476 6890770 -82613783 + AluSc SINE Alu 1 295 -14 2433 101 0 0 chr17 6891124 6891431 -82613122 + AluSq SINE Alu 1 307 -6 4213 276 90 25 chr17 6891438 6893613 -82610940 + L1 LINE L1 2663 4977 -1169 997 181 24 52 chr17 6893615 6893825 -82610728 + MLT1A2 LTR MaLR 11 214 -160 624 220 0 8 chr17 6893841 6893973 -82610580 + L1MD2 LINE L1 722 852 -5557 * 882 69 0 0 chr17 6893967 6894083 -82610470 - L1PA5 LINE L1 -167 5987 5872 1279 55 0 0 chr17 6894083 6894242 -82610311 + L1PA5 LINE L1 5992 6154 0 261 0 0 0 chr17 6894248 6894277 -82610276 + (TA)n Simple_repeat Simple_repeat 1 29 0 1443 202 15 3 chr17 6894277 6894599 -82609954 + L1MD2 LINE L1 841 1166 -5243 1188 195 106 44 chr17 6894644 6894829 -82609724 + L1MD2 LINE L1 3100 3272 -3134 2416 89 7 0 chr17 6894829 6895133 -82609420 + AluSc SINE Alu 1 306 -3 1188 195 106 44 chr17 6895133 6895382 -82609171 + L1MD2 LINE L1 3272 3561 -2845 725 147 66 22 chr17 6895384 6895520 -82609033 + FLAM_C SINE Alu 2 143 0 2011 246 37 26 chr17 6895520 6895681 -82608872 + L1MD2 LINE L1 3953 4111 -2295 1797 167 43 7 chr17 6895681 6895981 -82608572 + AluJb SINE Alu 1 311 -1 2011 246 37 26 chr17 6895981 6896468 -82608085 + L1MD2 LINE L1 4111 4608 -1798 958 54 0 0 chr17 6896468 6896580 -82607973 + AluSg/x SINE Alu 187 298 -12 7828 50 10 12 chr17 6896617 6898083 -82606470 + SVA Other Other 3 1386 0 25 0 0 0 chr17 6898116 6898141 -82606412 + AT_rich Low_complexity Low_complexity 1 25 0 448 245 99 52 chr17 6898335 6898678 -82605875 + L1MC5 LINE L1 7389 7747 -214 2829 215 35 49 chr17 6898692 6899053 -82605500 + L1MD2 LINE L1 4602 4966 -1653 1975 98 77 21 chr17 6899053 6899339 -82605214 + AluY SINE Alu 1 302 -9 2829 215 35 49 chr17 6899339 6899620 -82604933 + L1MD2 LINE L1 4966 5249 -1370 2501 75 3 0 chr17 6899620 6899925 -82604628 - AluSp SINE Alu -7 306 1 2829 215 35 49 chr17 6899925 6900774 -82603779 + L1MD2 LINE L1 5249 6079 -540 1203 146 0 0 chr17 6900779 6900950 -82603603 + AluSg/x SINE Alu 129 299 -11 749 128 96 8 chr17 6900960 6901085 -82603468 + FLAM_C SINE Alu 8 143 0 2221 121 0 34 chr17 6901085 6901408 -82603145 + AluSx SINE Alu 1 312 0 1685 235 23 11 chr17 6901413 6901855 -82602698 + L1MD2 LINE L1 6084 6530 -89 401 138 25 0 chr17 6901908 6901988 -82602565 + L1MD2 LINE L1 6537 6618 -1 2111 142 0 13 chr17 6901998 6902300 -82602253 + AluSq SINE Alu 1 298 -15 234 258 16 0 chr17 6902344 6902406 -82602147 + (TGAA)n Simple_repeat Simple_repeat 3 65 0 1228 139 0 0 chr17 6902428 6902594 -82601959 + AluJo SINE Alu 1 166 -146 205 271 0 0 chr17 6903086 6903134 -82601419 + MIR SINE MIR 194 241 -21 341 245 0 60 chr17 6904379 6904683 -82599870 + (CA)n Simple_repeat Simple_repeat 1 285 0 288 0 0 0 chr17 6904699 6904731 -82599822 + (CA)n Simple_repeat Simple_repeat 2 33 0 1872 173 10 0 chr17 6905422 6905728 -82598825 - AluJb SINE Alu -3 309 1 1888 104 4 0 chr17 6906085 6906326 -82598227 + AluSx SINE Alu 27 268 -44 404 339 93 32 chr17 6906468 6906608 -82597945 - L1MC/D LINE L1 -747 5399 5269 1423 25 0 0 chr17 6906608 6906771 -82597782 + L1PA5 LINE L1 5987 6149 -5 404 339 93 32 chr17 6906771 6907178 -82597375 - L1MC/D LINE L1 -877 5269 4890 2545 51 0 3 chr17 6907437 6907733 -82596820 + AluY SINE Alu 1 295 -16 349 315 195 15 chr17 6907746 6908013 -82596540 - L1MC/D LINE L1 -1722 4424 4110 2069 133 6 38 chr17 6908067 6908382 -82596171 - AluSq SINE Alu -8 305 1 228 244 0 0 chr17 6908666 6908707 -82595846 - MIR SINE MIR -132 76 36 954 9 0 0 chr17 6908956 6909064 -82595489 + AluY SINE Alu 203 310 -1 449 283 45 71 chr17 6909571 6909734 -82594819 - MIR SINE MIR -69 193 34 2334 98 0 0 chr17 6909734 6910029 -82594524 - AluSx SINE Alu -17 295 1 449 283 45 71 chr17 6910029 6910063 -82594490 - MIR SINE MIR -228 34 1 2398 70 10 3 chr17 6910661 6910962 -82593591 - AluSq SINE Alu -10 303 1 396 297 27 27 chr17 6910973 6911158 -82593395 + L2 LINE L2 1705 1889 -1425 850 248 71 40 chr17 6911160 6911511 -82593042 + MER92A LTR ERV1 1 362 -50 570 297 221 26 chr17 6911526 6912636 -82591917 + L2 LINE L2 1888 3218 -95 381 93 0 0 chr17 6912666 6912720 -82591833 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 295 294 117 22 chr17 6913817 6913997 -82590556 + LTR16A1 LTR ERVL 168 364 -93 268 356 11 0 chr17 6914830 6914917 -82589636 + L2 LINE L2 3121 3208 -64 410 304 31 58 chr17 6915259 6915450 -82589103 - MIR3 SINE MIR -20 188 3 303 258 0 0 chr17 6916034 6916100 -82588453 + MIR SINE MIR 78 143 -65 744 248 18 91 chr17 6916558 6916832 -82587721 - MIR SINE MIR 0 262 9 2340 88 7 0 chr17 6917089 6917383 -82587170 - AluSg SINE Alu -10 300 5 769 199 30 6 chr17 6918178 6918344 -82586209 - MLT1B LTR MaLR 0 467 298 * 798 166 0 45 chr17 6918325 6918482 -82586071 - MLT1B LTR MaLR -207 183 34 513 182 0 0 chr17 6918494 6918593 -82585960 + (CA)n Simple_repeat Simple_repeat 2 100 0 396 343 69 23 chr17 6918939 6919114 -82585439 - L2 LINE L2 -1 3271 3089 938 217 4 71 chr17 6919177 6919417 -82585136 + MER58A DNA MER1_type 1 224 0 322 349 71 0 chr17 6919530 6919656 -82584897 + MIR3 SINE MIR 49 183 -25 2179 136 0 0 chr17 6920055 6920364 -82584189 + AluSx SINE Alu 4 312 0 391 235 105 45 chr17 6920391 6920616 -82583937 + MIR SINE MIR 19 260 -2 412 266 49 21 chr17 6920668 6920811 -82583742 - MIR3 SINE MIR -58 150 4 211 289 96 0 chr17 6920821 6920904 -82583649 + L2 LINE L2 3182 3272 0 231 103 0 0 chr17 6921274 6921313 -82583240 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1901 122 0 0 chr17 6921314 6921568 -82582985 - AluSc SINE Alu -55 254 1 364 391 39 6 chr17 6922047 6922226 -82582327 + HAL1 LINE L1 1613 1797 -710 1987 118 0 77 chr17 6922510 6922833 -82581720 + AluSx SINE Alu 3 300 -12 402 296 68 46 chr17 6922851 6922901 -82581652 + L1ME LINE L1 5267 5314 -807 2346 98 0 3 chr17 6922901 6923198 -82581355 + AluSx SINE Alu 1 296 -16 2478 65 7 3 chr17 6923200 6923507 -82581046 + AluY SINE Alu 1 308 -3 402 296 68 46 chr17 6923507 6923786 -82580767 + L1ME LINE L1 5314 5603 -518 3907 128 32 8 chr17 6924076 6924691 -82579862 + L1PA16 LINE L1 5533 6162 -4 760 274 91 11 chr17 6924850 6925223 -82579330 + LTR33A LTR ERVL 121 523 0 349 292 289 0 chr17 6925223 6925535 -82579018 - L2 LINE L2 -517 2797 2396 252 0 0 0 chr17 6925540 6925568 -82578985 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 1771 118 4 4 chr17 6925614 6925859 -82578694 - AluSq SINE Alu -11 302 58 309 318 20 47 chr17 6926717 6926865 -82577688 + MIR SINE MIR 63 206 -56 2328 96 23 0 chr17 6927587 6927890 -82576663 + AluSg SINE Alu 1 310 0 221 283 283 26 chr17 6928002 6928193 -82576360 - MIR SINE MIR -1 261 22 306 0 0 0 chr17 6928931 6928965 -82575588 + (TG)n Simple_repeat Simple_repeat 2 35 0 201 143 0 0 chr17 6928966 6929001 -82575552 + (GA)n Simple_repeat Simple_repeat 2 36 0 308 253 76 0 chr17 6929040 6929119 -82575434 + L2 LINE L2 3152 3236 -36 407 257 53 9 chr17 6929197 6929310 -82575243 + L2 LINE L2 3188 3305 -8 277 320 155 39 chr17 6929365 6929705 -82574848 + L3 LINE CR1 1116 1508 -69 1050 154 64 86 chr17 6929705 6929850 -82574703 + MER30 DNA MER1_type 2 142 -88 2267 90 0 23 chr17 6929850 6930150 -82574403 + AluSg SINE Alu 1 293 -17 1050 154 64 86 chr17 6930150 6930237 -82574316 + MER30 DNA MER1_type 142 229 -1 277 320 155 39 chr17 6930237 6930284 -82574269 + L3 LINE CR1 1508 1548 -29 2338 96 0 0 chr17 6930731 6931023 -82573530 + AluSg SINE Alu 1 292 -18 593 279 11 34 chr17 6931221 6931400 -82573153 + MIR SINE MIR 29 203 -59 1173 282 95 36 chr17 6931974 6932502 -82572051 + L2 LINE L2 2222 2780 -534 1846 42 0 30 chr17 6932865 6933102 -82571451 + L1PA5 LINE L1 5925 6154 0 208 299 72 0 chr17 6933110 6933207 -82571346 + L2 LINE L2 2766 2869 -445 578 175 0 10 chr17 6933888 6933991 -82570562 + MLT1C LTR MaLR 1 102 -365 2239 88 0 7 chr17 6933992 6934275 -82570278 - AluSc SINE Alu -8 301 21 254 200 0 0 chr17 6934277 6934332 -82570221 - L1MC4 LINE L1 -540 7502 7448 1844 165 8 58 chr17 6934348 6934741 -82569812 + MLT1C LTR MaLR 95 467 0 2469 245 120 20 chr17 6934741 6935912 -82568641 + L1MC4 LINE L1 6482 7713 -95 331 269 0 119 chr17 6935999 6936053 -82568500 - MER5A DNA MER1_type -63 126 96 2376 116 0 0 chr17 6936053 6936363 -82568190 + AluSx SINE Alu 1 310 -2 331 269 0 119 chr17 6936363 6936442 -82568111 - MER5A DNA MER1_type -93 96 9 450 275 76 18 chr17 6936456 6936627 -82567926 + L2 LINE L2 2880 3060 -253 2122 190 47 19 chr17 6936687 6937156 -82567397 - MLT1D LTR MaLR -2 503 22 277 257 67 12 chr17 6937258 6937383 -82567170 + MIR SINE MIR 60 191 -65 184 379 29 19 chr17 6938216 6938319 -82566234 - L2 LINE L2 -19 3294 3191 859 72 7 7 chr17 6938522 6938660 -82565893 + (CA)n Simple_repeat Simple_repeat 2 139 0 3518 148 2 29 chr17 6938673 6938724 -82565829 - L1PA15 LINE L1 0 6165 6114 275 0 0 28 chr17 6938724 6938760 -82565793 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1987 83 0 0 chr17 6938760 6939000 -82565553 - AluSg SINE Alu -31 279 40 3518 148 2 29 chr17 6939000 6939537 -82565016 - L1PA15 LINE L1 -49 6116 5592 2230 101 14 0 chr17 6939685 6939973 -82564580 - AluSc SINE Alu -17 292 1 327 312 71 51 chr17 6940868 6941020 -82563533 + L2 LINE L2 2812 2972 -300 420 20 0 0 chr17 6941020 6941069 -82563484 + (CA)n Simple_repeat Simple_repeat 1 49 0 327 312 71 51 chr17 6941069 6941169 -82563384 + L2 LINE L2 2972 3069 -203 2381 116 0 0 chr17 6941810 6942120 -82562433 + AluSg SINE Alu 1 310 0 2092 104 50 0 chr17 6942650 6942929 -82561624 - AluSq SINE Alu -6 307 15 190 226 0 94 chr17 6943721 6943774 -82560779 - L2 LINE L2 -86 3227 3180 3078 103 53 0 chr17 6943783 6944218 -82560335 + LTR22A LTR ERVK 1 458 0 305 302 133 46 chr17 6944560 6944724 -82559829 + MIR SINE MIR 31 211 -51 1011 191 3 6 chr17 6945306 6945619 -82558934 + (CAT)n Simple_repeat Simple_repeat 2 313 0 541 315 24 33 chr17 6945621 6945834 -82558719 - MIR SINE MIR -1 261 51 2162 108 24 0 chr17 6946093 6946380 -82558173 + AluSg SINE Alu 1 294 -16 365 297 18 0 chr17 6946716 6946827 -82557726 + MIR3 SINE MIR 82 194 -14 2117 125 0 0 chr17 6947242 6947585 -82556968 + AluSg SINE Alu 1 343 0 297 257 28 55 chr17 6947739 6947848 -82556705 + MIR SINE MIR 74 179 -83 596 299 17 17 chr17 6948029 6948203 -82556350 + MIR SINE MIR 41 214 -48 2322 93 14 0 chr17 6948973 6949264 -82555289 - AluSx SINE Alu -17 295 1 627 284 65 20 chr17 6949685 6950040 -82554513 - L1ME3 LINE L1 -277 5885 5515 426 254 27 9 chr17 6950046 6950156 -82554397 - MIR SINE MIR -61 147 36 2139 119 3 7 chr17 6951047 6951357 -82553196 - AluSc SINE Alu 0 309 1 233 361 25 25 chr17 6951358 6951405 -82553148 + L2 LINE L2 3149 3195 -77 253 231 31 0 chr17 6951405 6951470 -82553083 + MIR SINE MIR 193 259 -3 446 299 148 31 chr17 6951855 6952055 -82552498 - MLT1I LTR MaLR 0 409 163 2657 194 56 6 chr17 6952055 6952595 -82551958 + MLT1F1 LTR MaLR 1 567 0 446 299 148 31 chr17 6952595 6952685 -82551868 - MLT1I LTR MaLR -246 163 85 187 283 0 19 chr17 6952825 6952878 -82551675 + L2 LINE L2 2701 2752 -562 187 307 202 23 chr17 6952890 6953108 -82551445 + L2 LINE L2 3016 3272 0 324 161 0 0 chr17 6953111 6953173 -82551380 + (TGGA)n Simple_repeat Simple_repeat 1 62 0 259 282 94 8 chr17 6954083 6954102 -82550451 - MIR SINE MIR -71 191 175 2252 101 0 28 chr17 6954102 6954383 -82550170 + AluY SINE Alu 1 274 -37 218 0 95 0 chr17 6954383 6954425 -82550128 + A-rich Low_complexity Low_complexity 1 46 0 2252 101 0 28 chr17 6954425 6954461 -82550092 + AluY SINE Alu 274 309 -2 259 282 94 8 chr17 6954461 6954558 -82549995 - MIR SINE MIR -87 175 65 482 285 26 65 chr17 6954565 6954781 -82549772 - MIR3 SINE MIR -51 211 3 2724 93 132 5 chr17 6954943 6955374 -82549179 - LTR19A LTR ERV1 0 486 1 642 272 132 55 chr17 6956257 6956800 -82547753 - MLT1H LTR MaLR -3 552 1 611 261 64 80 chr17 6957905 6958154 -82546399 + MIR SINE MIR 2 246 -16 425 268 8 24 chr17 6958202 6958325 -82546228 - MIR SINE MIR -140 122 2 490 257 56 0 chr17 6958332 6958476 -82546077 + MIR SINE MIR 84 235 -27 732 260 28 0 chr17 6958495 6958676 -82545877 + MIR SINE MIR 63 248 -14 2373 89 7 3 chr17 6958738 6959040 -82545513 - AluSx SINE Alu -9 303 1 2324 117 0 3 chr17 6959430 6959737 -82544816 - AluSq SINE Alu -7 306 1 482 297 57 38 chr17 6960063 6960275 -82544278 - MIR SINE MIR 0 262 47 726 184 207 0 chr17 6960302 6960476 -82544077 + MIR SINE MIR 21 230 -32 679 144 18 0 chr17 6960602 6960713 -82543840 + MER5A DNA MER1_type 6 118 -71 1528 213 23 35 chr17 6960713 6960869 -82543684 + MLT1A1 LTR MaLR 1 157 -208 2467 84 0 0 chr17 6960869 6961166 -82543387 + AluSq SINE Alu 1 297 -16 1528 213 23 35 chr17 6961166 6961357 -82543196 + MLT1A1 LTR MaLR 157 344 -21 240 329 0 0 chr17 6961370 6961440 -82543113 + MER5A DNA MER1_type 120 189 0 407 357 55 6 chr17 6961456 6961638 -82542915 + MIR SINE MIR 22 212 -50 206 276 35 0 chr17 6962539 6962597 -82541956 - L3 LINE CR1 -127 1450 1391 625 206 103 7 chr17 6962601 6962747 -82541806 + MER45A DNA AcHobo 16 175 -3 752 267 6 0 chr17 6962880 6963045 -82541508 - MER96 DNA MER1_type? 0 175 10 316 217 0 0 chr17 6963257 6963317 -82541236 + MER5A DNA MER1_type 21 80 -109 2118 162 28 0 chr17 6963324 6963683 -82540870 - L1MB1 LINE L1 -356 5812 5444 351 209 0 0 chr17 6963678 6963745 -82540808 + L1MB1 LINE L1 5839 5905 -263 * 1241 143 10 0 chr17 6963746 6963955 -82540598 + MER2 DNA MER2_type 1 211 -134 225 137 20 20 chr17 6963956 6964007 -82540546 + (TATTG)n Simple_repeat Simple_repeat 3 53 0 1080 175 10 0 chr17 6964083 6964283 -82540270 + L1MB1 LINE L1 5905 6106 -62 1262 131 11 0 chr17 6964294 6964477 -82540076 + AluSg/x SINE Alu 120 304 -8 269 136 0 0 chr17 6964477 6964521 -82540032 + L1MB1 LINE L1 6124 6167 -1 340 221 0 63 chr17 6964540 6964635 -82539918 + MER5A DNA MER1_type 61 149 -40 4155 193 38 10 chr17 6964892 6966048 -82538505 + L1MB4 LINE L1 4944 6135 -45 2022 107 3 40 chr17 6966064 6966364 -82538189 + AluSp SINE Alu 1 289 -24 186 351 39 0 chr17 6966519 6966596 -82537957 - MIR3 SINE MIR -17 191 112 554 239 42 24 chr17 6966876 6967034 -82537519 + MIR3 SINE MIR 34 197 -54 25 0 0 0 chr17 6967034 6967059 -82537494 + AT_rich Low_complexity Low_complexity 1 25 0 333 0 0 0 chr17 6967215 6967252 -82537301 + (TG)n Simple_repeat Simple_repeat 2 38 0 525 288 36 7 chr17 6967340 6967479 -82537074 - MIR SINE MIR -95 167 25 1212 117 0 103 chr17 6967687 6967900 -82536653 + AluSx SINE Alu 1 191 -121 347 85 0 0 chr17 6967904 6967951 -82536602 + AluSc SINE Alu 61 107 -192 1488 113 0 5 chr17 6968006 6968201 -82536352 + AluSg/x SINE Alu 108 301 -11 1529 257 36 5 chr17 6968447 6968859 -82535694 + LTR16A LTR ERVL 26 450 0 1059 238 141 35 chr17 6969597 6970050 -82534503 - MLT1D LTR MaLR -4 501 1 403 297 27 0 chr17 6970324 6970435 -82534118 - MER81 DNA DNA 0 114 1 1103 190 100 35 chr17 6970729 6970883 -82533670 - MLT1C LTR MaLR -2 465 323 2069 116 71 100 chr17 6970883 6971322 -82533231 + MSTA LTR MaLR 3 428 0 1103 190 100 35 chr17 6971322 6971457 -82533096 - MLT1C LTR MaLR -144 323 157 264 362 11 11 chr17 6971489 6971583 -82532970 + L2 LINE L2 3117 3210 -62 259 330 11 11 chr17 6971595 6971686 -82532867 - L3 LINE CR1 -97 1480 1390 705 272 80 34 chr17 6971943 6972267 -82532286 + L1MC4a LINE L1 5391 5729 -392 446 335 41 10 chr17 6972281 6972475 -82532078 + L1MC4a LINE L1 5793 5992 -1816 317 291 75 22 chr17 6973381 6973515 -82531038 + HAL1b LINE L1 1201 1341 -7 405 299 37 43 chr17 6973601 6973788 -82530765 - MIR3 SINE MIR -3 205 20 225 0 0 0 chr17 6975481 6975506 -82529047 + (CA)n Simple_repeat Simple_repeat 1 25 0 360 106 0 15 chr17 6975635 6975676 -82528877 - MLT2D LTR ERVL 0 520 479 405 0 0 0 chr17 6975676 6975721 -82528832 + (TG)n Simple_repeat Simple_repeat 2 46 0 360 106 0 15 chr17 6975721 6975745 -82528808 - MLT2D LTR ERVL -41 479 456 198 240 0 0 chr17 6975760 6975810 -82528743 + (TA)n Simple_repeat Simple_repeat 2 51 0 207 0 0 0 chr17 6975810 6975833 -82528720 + (GA)n Simple_repeat Simple_repeat 2 24 0 1043 185 35 142 chr17 6975839 6976234 -82528319 - MLT2D LTR ERVL -61 353 1 255 227 91 0 chr17 6976311 6976377 -82528176 - MIR SINE MIR -74 188 117 622 289 28 28 chr17 6976404 6976615 -82527938 + MIR SINE MIR 52 262 0 2332 171 76 78 chr17 6977835 6978390 -82526163 + MLT2B3 LTR ERVL 1 554 0 449 263 23 8 chr17 6979112 6979245 -82525308 - LTR16C LTR ERVL 0 491 357 216 191 0 0 chr17 6979346 6979393 -82525160 + T-rich Low_complexity Low_complexity 1 47 0 2396 82 10 3 chr17 6979396 6979699 -82524854 - AluSc SINE Alu -4 305 1 315 276 86 65 chr17 6979701 6979933 -82524620 - LTR16C LTR ERVL -253 238 2 522 358 39 25 chr17 6980043 6980322 -82524231 - L3 LINE CR1 -2 1575 1293 2013 188 86 0 chr17 6980409 6980851 -82523702 + MLT1D LTR MaLR 26 505 0 717 320 114 53 chr17 6980896 6981389 -82523164 - L3 LINE CR1 -354 1223 701 341 267 11 33 chr17 6982022 6982112 -82522441 - L3 LINE CR1 -903 674 587 2543 181 52 81 chr17 6982229 6982582 -82521971 + L1MB5 LINE L1 5258 5312 -862 1669 193 0 3 chr17 6982582 6982882 -82521671 + AluJo SINE Alu 1 299 -13 2543 181 52 81 chr17 6982882 6983389 -82521164 + L1MB5 LINE L1 5312 5832 -342 235 262 82 0 chr17 6983534 6983595 -82520958 + L3 LINE CR1 609 674 -903 597 193 0 17 chr17 6983632 6983751 -82520802 + L1MB5 LINE L1 6058 6174 0 1984 135 66 23 chr17 6983802 6984151 -82520402 - THE1B LTR MaLR 0 364 1 228 143 41 0 chr17 6984760 6984809 -82519744 + MER112 DNA MER1_type 106 156 -104 1945 130 33 0 chr17 6985160 6985460 -82519093 + AluSg SINE Alu 1 310 0 320 327 46 7 chr17 6985806 6986081 -82518472 + L1ME LINE L1 5373 5704 -417 433 268 41 8 chr17 6986145 6986268 -82518285 - MIR SINE MIR -51 211 85 430 182 0 0 chr17 6986350 6986416 -82518137 - L2 LINE L2 0 3272 3207 239 200 20 0 chr17 6986663 6986713 -82517840 - L2 LINE L2 0 3313 3263 1959 123 0 3 chr17 6986787 6987087 -82517466 + AluSx SINE Alu 1 299 -13 23 0 0 0 chr17 6987202 6987225 -82517328 + AT_rich Low_complexity Low_complexity 1 23 0 324 75 15 30 chr17 6987564 6987631 -82516922 + (TAAA)n Simple_repeat Simple_repeat 4 69 0 2121 55 7 0 chr17 6987786 6988058 -82516495 - AluY SINE Alu -1 310 37 439 70 42 0 chr17 6988068 6988139 -82516414 + T-rich Low_complexity Low_complexity 3 76 0 1641 178 10 0 chr17 6988141 6988444 -82516109 - AluSg SINE Alu -4 306 1 278 314 32 8 chr17 6989188 6989312 -82515241 + HAL1 LINE L1 23 149 -2358 2060 103 3 3 chr17 6989326 6989618 -82514935 + AluSq SINE Alu 1 292 -21 1077 171 6 0 chr17 6989939 6990115 -82514438 - MLT1F1 LTR MaLR 0 567 391 585 267 48 0 chr17 6990085 6990231 -82514322 + MER58B DNA MER1_type 150 302 -39 * 714 210 8 0 chr17 6990238 6990362 -82514191 - MER58B DNA MER1_type -22 319 195 * 1539 196 149 9 chr17 6990351 6990687 -82513866 - MLT1F1 LTR MaLR -184 383 1 782 274 71 110 chr17 6990758 6991544 -82513009 + HAL1 LINE L1 745 1471 -1036 1238 204 14 5 chr17 6991544 6991765 -82512788 + MER58A DNA MER1_type 2 224 0 782 274 71 110 chr17 6991765 6992169 -82512384 + HAL1 LINE L1 1471 1889 -618 2100 116 7 7 chr17 6993036 6993339 -82511214 + AluSq SINE Alu 1 303 -10 1919 118 3 41 chr17 6993758 6994073 -82510480 - AluSx SINE Alu -9 303 1 483 203 15 68 chr17 6994519 6994652 -82509901 - MIR SINE MIR -115 147 22 264 273 0 30 chr17 6995733 6995838 -82508715 + (CACG)n Simple_repeat Simple_repeat 1 101 0 2065 118 17 0 chr17 6996557 6996853 -82507700 + AluSx SINE Alu 1 301 -11 264 301 110 43 chr17 6997199 6997408 -82507145 - L2 LINE L2 -526 2788 2566 387 211 0 0 chr17 6997568 6997658 -82506895 + (CA)n Simple_repeat Simple_repeat 1 90 0 621 257 0 0 chr17 6997705 6997884 -82506669 + (CA)n Simple_repeat Simple_repeat 1 179 0 223 223 202 32 chr17 6998058 6998152 -82506401 - MIR SINE MIR -82 126 17 181 256 0 0 chr17 6998166 6998209 -82506344 - MIR3 SINE MIR -26 182 140 341 248 87 52 chr17 6998608 6998763 -82505790 + MIR3 SINE MIR 35 192 -42 1970 104 3 10 chr17 6998888 6999200 -82505353 + AluY SINE Alu 3 312 0 748 254 174 40 chr17 6999204 6999601 -82504952 - MLT1J LTR MaLR -51 460 11 184 321 71 0 chr17 6999829 6999913 -82504640 - L2 LINE L2 -695 2619 2530 275 227 91 11 chr17 7001182 7001270 -82503283 + L2 LINE L2 2916 3010 -262 210 276 92 40 chr17 7001248 7001324 -82503229 + L2 LINE L2 2722 2801 -513 * 407 257 20 10 chr17 7001341 7001442 -82503111 + MER94 DNA DNA 19 120 -14 555 308 86 4 chr17 7001452 7001686 -82502867 + L2 LINE L2 2809 3061 -252 1032 285 98 21 chr17 7002156 7002535 -82502018 - MLT1K LTR MaLR -34 554 147 246 266 42 112 chr17 7002690 7002833 -82501720 + MIR SINE MIR 60 192 -70 317 287 144 35 chr17 7003789 7003963 -82500590 + MIR SINE MIR 18 210 -52 1875 141 7 0 chr17 7004173 7004470 -82500083 - AluSg SINE Alu 0 310 12 432 236 34 0 chr17 7004603 7004692 -82499861 + L1MC5 LINE L1 7810 7901 -60 211 379 15 0 chr17 7005053 7005119 -82499434 - MIR SINE MIR -108 100 34 467 216 28 102 chr17 7005251 7005427 -82499126 - MIR SINE MIR -1 261 99 300 264 55 11 chr17 7005530 7005621 -82498932 - L1ME LINE L1 -340 5781 5687 384 248 38 53 chr17 7005640 7005773 -82498780 + L2 LINE L2 3180 3310 -3 439 141 22 0 chr17 7005796 7005888 -82498665 + GA-rich Low_complexity Low_complexity 1 94 0 662 216 24 72 chr17 7006005 7006049 -82498504 - MER5B DNA MER1_type 0 178 133 2382 63 0 10 chr17 7006049 7006349 -82498204 - AluSg SINE Alu -13 297 1 662 216 24 72 chr17 7006349 7006471 -82498082 - MER5B DNA MER1_type -45 133 20 465 293 18 24 chr17 7006705 7006869 -82497684 + MER5A DNA MER1_type 26 188 -1 414 255 114 62 chr17 7007540 7007865 -82496688 - HAL1 LINE L1 -832 1675 1334 395 198 127 32 chr17 7007899 7008025 -82496528 - MIR SINE MIR -17 245 108 2108 124 0 7 chr17 7008762 7009068 -82495485 + AluSx SINE Alu 1 304 -8 1974 156 122 64 chr17 7009612 7010094 -82494459 + MLT2B1 LTR ERVL 3 512 -8 287 116 0 116 chr17 7010360 7010429 -82494124 + MLT1K LTR MaLR 182 242 -346 246 235 20 0 chr17 7010396 7010447 -82494106 + MLT1K LTR MaLR 141 192 -396 * 315 291 106 70 chr17 7011186 7011543 -82493010 + L2 LINE L2 2450 2819 -495 2402 69 0 0 chr17 7012579 7012882 -82491671 - AluY SINE Alu -8 303 1 193 294 0 0 chr17 7013398 7013449 -82491104 + L2 LINE L2 2487 2537 -777 2241 141 19 14 chr17 7013549 7013912 -82490641 - LTR45B LTR ERV1 -101 388 24 1824 147 7 3 chr17 7013912 7014205 -82490348 + AluSx SINE Alu 1 294 -18 889 237 163 50 chr17 7014247 7014419 -82490134 + L2 LINE L2 2536 2687 -626 2033 83 3 53 chr17 7014419 7014744 -82489809 + AluSp SINE Alu 1 310 0 889 237 163 50 chr17 7014744 7015169 -82489384 + L2 LINE L2 2687 3221 -92 316 260 10 0 chr17 7015241 7015341 -82489212 - L1MC4 LINE L1 -17 8025 7925 206 214 0 0 chr17 7015345 7015387 -82489166 + (TCCA)n Simple_repeat Simple_repeat 4 45 0 1926 141 3 10 chr17 7015410 7015722 -82488831 - AluSg SINE Alu 0 310 1 570 216 20 40 chr17 7015843 7016011 -82488542 - L1ME2 LINE L1 -5 6161 5997 463 259 0 28 chr17 7016012 7016120 -82488433 + L2 LINE L2 3209 3313 0 2138 121 0 0 chr17 7016565 7016863 -82487690 - AluSq SINE Alu -15 298 1 528 16 0 0 chr17 7017074 7017135 -82487418 + (CA)n Simple_repeat Simple_repeat 2 62 0 225 327 144 26 chr17 7017504 7017657 -82486896 - L2 LINE L2 -1 3271 3101 242 321 47 0 chr17 7018229 7018335 -82486218 + L2 LINE L2 2550 2660 -654 333 0 0 0 chr17 7019348 7019385 -82485168 + (TG)n Simple_repeat Simple_repeat 2 38 0 2011 119 20 0 chr17 7020617 7020910 -82483643 - AluSx SINE Alu -13 299 1 1958 139 0 3 chr17 7020932 7021235 -82483318 - AluSx SINE Alu 0 312 11 1993 126 0 0 chr17 7021250 7021543 -82483010 - AluSx SINE Alu -11 301 9 1886 125 21 4 chr17 7021544 7021825 -82482728 - AluSx SINE Alu -26 286 1 629 304 65 42 chr17 7021866 7022221 -82482332 + L2 LINE L2 2910 3272 0 2306 81 0 0 chr17 7022222 7022520 -82482033 + AluY SINE Alu 1 298 -13 796 163 0 0 chr17 7022953 7023076 -82481477 - AluJo SINE Alu -22 290 168 785 135 0 0 chr17 7023078 7023189 -82481364 - AluJo SINE Alu -200 112 2 413 327 72 33 chr17 7024744 7025050 -82479503 + L1ME4a LINE L1 3459 3776 -2370 518 154 0 11 chr17 7025189 7025280 -82479273 + MLT1C LTR MaLR 1 90 -377 2169 113 3 0 chr17 7025298 7025607 -82478946 - AluSx SINE Alu -2 310 1 236 315 27 0 chr17 7025710 7025783 -82478770 + MER58 DNA MER1_type 2346 2420 0 2089 50 0 12 chr17 7025887 7026146 -82478407 + L1PA8 LINE L1 5913 6168 -4 389 321 137 50 chr17 7026617 7027090 -82477463 + L1ME4a LINE L1 4726 5253 -893 292 301 83 68 chr17 7027091 7027228 -82477325 + L1ME4a LINE L1 5255 5388 -733 2039 118 16 3 chr17 7027228 7027534 -82477019 + AluSg SINE Alu 1 310 0 292 301 83 68 chr17 7027534 7027722 -82476831 + L1ME4a LINE L1 5388 5585 -536 317 294 80 39 chr17 7028363 7028876 -82475677 + L1ME4a LINE L1 5588 6121 0 1011 278 84 28 chr17 7029740 7030118 -82474435 + L1MEd LINE L1 9 364 -5765 2040 120 0 13 chr17 7030118 7030434 -82474119 + AluSx SINE Alu 1 312 0 1011 278 84 28 chr17 7030434 7030902 -82473651 + L1MEd LINE L1 364 804 -5325 2151 104 0 7 chr17 7030902 7031199 -82473354 + AluSp SINE Alu 1 295 -18 1011 278 84 28 chr17 7031199 7031840 -82472713 + L1MEd LINE L1 804 1652 -4477 229 347 89 8 chr17 7032608 7032732 -82471821 - MLT1K LTR MaLR -23 565 432 250 214 36 0 chr17 7032847 7032903 -82471650 + MER53 DNA DNA 132 189 0 267 235 49 25 chr17 7032916 7032997 -82471556 - MLT1K LTR MaLR -342 246 164 2102 76 11 4 chr17 7033086 7033349 -82471204 + AluSg SINE Alu 34 298 -12 776 185 93 6 chr17 7033626 7033788 -82470765 - MER5B DNA MER1_type -2 176 1 1472 127 162 4 chr17 7033935 7034188 -82470365 + AluSx SINE Alu 1 293 -19 2422 61 0 38 chr17 7034206 7034519 -82470034 + AluY SINE Alu 5 305 -6 304 201 71 32 chr17 7034580 7034734 -82469819 + L1ME4a LINE L1 5962 6121 0 518 290 51 19 chr17 7035758 7035972 -82468581 + MIR SINE MIR 25 245 -17 329 280 106 15 chr17 7037201 7037333 -82467220 + MIR3 SINE MIR 56 199 -9 1886 235 74 6 chr17 7037937 7038559 -82465994 + L1MEd LINE L1 2577 3240 -2889 655 165 0 31 chr17 7038560 7038687 -82465866 + MLT1A1 LTR MaLR 197 319 -46 3991 236 59 47 chr17 7038690 7039462 -82465091 + L1MEd LINE L1 3235 3996 -2151 2511 70 0 0 chr17 7039462 7039760 -82464793 + AluY SINE Alu 1 298 -13 3991 236 59 47 chr17 7039760 7040136 -82464417 + L1MEd LINE L1 3996 4366 -1781 1869 161 0 24 chr17 7040136 7040427 -82464126 - AluJb SINE Alu -14 298 15 3991 236 59 47 chr17 7040427 7041467 -82463086 + L1MEd LINE L1 4366 5449 -698 327 222 56 0 chr17 7041644 7041716 -82462837 - HERVL LTR ERVL -848 4806 4731 606 236 25 6 chr17 7041842 7041999 -82462554 + L1MB7 LINE L1 6007 6166 -18 2215 129 3 0 chr17 7042342 7042653 -82461900 + AluSx SINE Alu 1 312 0 1004 120 0 0 chr17 7042671 7042804 -82461749 + AluSg SINE Alu 1 133 -177 2138 138 3 3 chr17 7042804 7043115 -82461438 + AluSx SINE Alu 1 311 -1 403 213 13 20 chr17 7043115 7043265 -82461288 + GA-rich Low_complexity Low_complexity 2 150 0 391 220 96 53 chr17 7043830 7043992 -82460561 + L1M4 LINE L1 5069 5243 -903 3961 4 0 0 chr17 7043992 7044450 -82460103 + L1PA2 LINE L1 5698 6155 0 391 220 96 53 chr17 7044450 7044496 -82460057 + L1M4 LINE L1 5243 5286 -860 220 27 54 0 chr17 7044550 7044587 -82459966 + (TAAAA)n Simple_repeat Simple_repeat 3 41 0 543 194 173 0 chr17 7044600 7044793 -82459760 + L1ME1 LINE L1 5218 5440 -722 1363 112 0 0 chr17 7044793 7044963 -82459590 + AluSq SINE Alu 1 170 -143 773 273 62 32 chr17 7044964 7045305 -82459248 + L1ME1 LINE L1 5810 6160 -6 610 206 18 42 chr17 7045339 7045504 -82459049 - MLT1J1 LTR MaLR -285 161 1 219 309 41 24 chr17 7046376 7046499 -82458054 - MIR3 SINE MIR -48 160 36 2275 72 3 52 chr17 7046523 7046850 -82457703 + AluSq SINE Alu 2 313 0 2307 121 0 0 chr17 7047009 7047315 -82457238 + AluSx SINE Alu 1 306 -6 1155 157 0 5 chr17 7047830 7048027 -82456526 - MLT1D LTR MaLR 0 505 310 566 208 66 85 chr17 7048066 7048278 -82456275 - MLT1D LTR MaLR -295 210 3 1347 49 5 16 chr17 7048522 7048706 -82455847 - L1PA7 LINE L1 -1 6153 5972 255 297 93 0 chr17 7049456 7049574 -82454979 - MIR3 SINE MIR -46 162 34 267 54 0 0 chr17 7050604 7050641 -82453912 + (CAGGG)n Simple_repeat Simple_repeat 2 38 0 192 97 0 0 chr17 7051115 7051146 -82453407 + (CGGGGG)n Simple_repeat Simple_repeat 3 33 0 394 59 0 0 chr17 7051279 7051330 -82453223 - AluSp/q SINE Alu -27 276 226 2391 100 0 0 chr17 7052013 7052313 -82452240 + AluSg SINE Alu 1 300 -10 2381 98 3 9 chr17 7052382 7052697 -82451856 + AluSp SINE Alu 1 313 0 3765 66 14 50 chr17 7053090 7053417 -82451136 + L1PA8 LINE L1 5619 5918 -254 2427 108 0 0 chr17 7053417 7053723 -82450830 + AluSc SINE Alu 1 306 -3 3765 66 14 50 chr17 7053723 7053970 -82450583 + L1PA8 LINE L1 5918 6172 0 2279 54 0 0 chr17 7054622 7054882 -82449671 - AluSc SINE Alu -49 260 1 2205 109 13 16 chr17 7055654 7055958 -82448595 + AluSg SINE Alu 1 303 -7 195 280 120 13 chr17 7056779 7056854 -82447699 - MIR SINE MIR -1 261 179 362 127 0 0 chr17 7056854 7056909 -82447644 + MSTD LTR MaLR 1 55 -341 2441 83 0 3 chr17 7056927 7057227 -82447326 - AluSq SINE Alu -14 299 1 447 311 61 25 chr17 7057245 7057441 -82447112 + L1ME3 LINE L1 5766 5968 -202 1011 172 27 11 chr17 7057623 7057809 -82446744 - AluJo SINE Alu -4 308 120 1673 138 32 0 chr17 7057922 7058233 -82446320 - L1MA5A LINE L1 0 6297 5977 251 105 0 0 chr17 7058239 7058277 -82446276 + MLT1A2 LTR MaLR 75 112 -262 2831 204 35 24 chr17 7058741 7059372 -82445181 + LTR9B LTR ERV1 7 644 0 255 245 46 22 chr17 7059460 7059529 -82445024 + L1ME3 LINE L1 6025 6091 -79 990 175 5 63 chr17 7059529 7059701 -82444852 + MER6B DNA MER2_type 1 159 -706 2149 107 0 67 chr17 7059701 7060028 -82444525 - AluSq SINE Alu -8 305 1 990 175 5 63 chr17 7060028 7060078 -82444475 + MER6B DNA MER2_type 159 210 0 255 245 46 22 chr17 7060078 7060144 -82444409 + L1ME3 LINE L1 6091 6163 -7 312 91 0 0 chr17 7060545 7060589 -82443964 + (TCCCC)n Simple_repeat Simple_repeat 1 44 0 2118 117 7 26 chr17 7060589 7060898 -82443655 - AluSx SINE Alu -9 303 1 287 320 0 13 chr17 7060901 7060979 -82443574 - L3 LINE CR1 -1269 308 232 2404 74 0 10 chr17 7061548 7061847 -82442706 - AluSg SINE Alu -13 297 2 493 308 128 4 chr17 7063087 7063321 -82441232 - L2 LINE L2 -95 3177 2915 529 195 71 0 chr17 7063900 7064013 -82440540 + L2 LINE L2 3193 3313 0 191 219 0 24 chr17 7064884 7064925 -82439628 - MIR SINE MIR -88 120 81 305 345 34 14 chr17 7065043 7065191 -82439362 - L2 LINE L2 -529 2785 2635 2388 95 0 13 chr17 7065516 7065832 -82438721 - AluSx SINE Alu 0 312 1 2453 83 3 0 chr17 7066418 7066719 -82437834 + AluSx SINE Alu 1 302 -10 285 344 32 8 chr17 7067001 7067126 -82437427 - MIR SINE MIR -96 166 39 322 202 24 12 chr17 7067989 7068073 -82436480 + MIR SINE MIR 65 149 -59 197 253 101 25 chr17 7069144 7069223 -82435330 + MIR3 SINE MIR 102 186 -22 1112 207 45 5 chr17 7071256 7071478 -82433075 - AluJo SINE Alu -81 231 1 433 199 145 48 chr17 7071637 7071802 -82432751 + MER5A DNA MER1_type 4 186 -3 209 353 85 17 chr17 7071805 7072040 -82432513 + L2 LINE L2 2263 2513 -801 244 273 15 0 chr17 7072577 7072643 -82431910 + L2 LINE L2 3247 3313 0 237 65 0 0 chr17 7072655 7072686 -82431867 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 181 173 115 0 chr17 7074717 7074769 -82429784 + L2 LINE L2 2332 2389 -925 207 100 0 0 chr17 7074783 7074813 -82429740 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 256 347 32 0 chr17 7074814 7074909 -82429644 - L2 LINE L2 -13 3300 3203 427 317 76 15 chr17 7074973 7075235 -82429318 + L2 LINE L2 2481 2758 -556 211 321 93 68 chr17 7075589 7075826 -82428727 + L3 LINE CR1 1309 1551 -26 421 242 147 19 chr17 7076269 7076426 -82428127 - MIR SINE MIR -70 192 16 1021 258 141 42 chr17 7076722 7077276 -82427277 + L1MC4a LINE L1 5364 5972 -1836 329 241 68 53 chr17 7078289 7078422 -82426131 + LTR33 LTR ERVL 382 516 -5 353 261 31 68 chr17 7078769 7078930 -82425623 + L2 LINE L2 3156 3310 -3 1427 175 77 17 chr17 7080103 7080400 -82424153 - MER58B DNA MER1_type 0 341 27 235 266 64 73 chr17 7080431 7080540 -82424013 + MER5B DNA MER1_type 1 108 -70 * 562 157 50 92 chr17 7080444 7080621 -82423932 - MER5A DNA MER1_type -9 169 11 225 279 76 25 chr17 7080691 7080770 -82423783 + L2 LINE L2 3187 3269 -3 235 229 157 0 chr17 7080820 7080903 -82423650 + MIR SINE MIR 87 182 -80 204 337 0 11 chr17 7081641 7081733 -82422820 + L2 LINE L2 2597 2687 -627 * 474 214 0 103 chr17 7081721 7081866 -82422687 + MIR SINE MIR 79 208 -54 208 291 74 40 chr17 7082387 7082562 -82421991 - MER5A DNA MER1_type -5 184 4 516 170 0 0 chr17 7083084 7083190 -82421363 + GA-rich Low_complexity Low_complexity 4 109 0 219 380 65 0 chr17 7083198 7083290 -82421263 - MIR SINE MIR -81 127 30 2050 90 25 0 chr17 7084685 7085014 -82419539 - AluSp SINE Alu 0 336 1 184 319 28 28 chr17 7085076 7085148 -82419405 + L2 LINE L2 2427 2498 -816 327 254 40 63 chr17 7085163 7085289 -82419264 - L1MC5 LINE L1 -29 7932 7810 2654 173 16 42 chr17 7086147 7086514 -82418039 + L1MB8 LINE L1 5375 5723 -455 1450 106 55 0 chr17 7086514 7086552 -82418001 + AluSg/x SINE Alu 84 118 -194 206 32 32 0 chr17 7086552 7086583 -82417970 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 1450 106 55 0 chr17 7086583 7086761 -82417792 + AluSg/x SINE Alu 118 312 0 2654 173 16 42 chr17 7086761 7086964 -82417589 + L1MB8 LINE L1 5723 5930 -248 189 0 0 0 chr17 7087064 7087085 -82417468 + (TCCCC)n Simple_repeat Simple_repeat 5 25 0 703 176 137 0 chr17 7087349 7087480 -82417073 + AluSx SINE Alu 42 190 -122 383 317 128 32 chr17 7087528 7087998 -82416555 + L2 LINE L2 2350 2864 -450 231 323 40 32 chr17 7088153 7088277 -82416276 + L2 LINE L2 2677 2801 -513 203 248 0 88 chr17 7090268 7090393 -82414160 + L2 LINE L2 2932 3045 -227 299 367 10 10 chr17 7091143 7091342 -82413211 + L2 LINE L2 2892 3090 -182 2320 89 0 0 chr17 7091796 7092099 -82412454 + AluSx SINE Alu 1 303 -9 794 257 23 0 chr17 7092906 7093081 -82411472 - MER58A DNA MER1_type -1 223 45 2315 106 0 0 chr17 7093908 7094220 -82410333 - AluSx SINE Alu 0 312 1 239 277 62 39 chr17 7095103 7095233 -82409320 - L2 LINE L2 -219 3053 2921 312 264 20 81 chr17 7095742 7095890 -82408663 + L3b LINE CR1 1290 1428 -155 269 219 106 41 chr17 7096071 7096194 -82408359 + MER5A DNA MER1_type 29 159 -30 636 294 108 5 chr17 7097402 7097606 -82406947 - MIR SINE MIR -22 240 16 2623 172 90 65 chr17 7097747 7098378 -82406175 + MER21B LTR ERV1 267 861 -2 2281 91 0 0 chr17 7098477 7098773 -82405780 - AluY SINE Alu -15 296 1 270 160 0 0 chr17 7099346 7099396 -82405157 + (CA)n Simple_repeat Simple_repeat 2 51 0 273 286 135 0 chr17 7099541 7099674 -82404879 - MIR3 SINE MIR -16 192 42 2053 192 32 68 chr17 7100215 7100681 -82403872 + MLT2B1 LTR ERVL 1 447 -73 2339 78 10 0 chr17 7100681 7100987 -82403566 - AluSp SINE Alu -4 309 1 2053 192 32 68 chr17 7100987 7101051 -82403502 + MLT2B1 LTR ERVL 447 512 -8 1162 195 32 18 chr17 7101329 7101550 -82403003 + MER58A DNA MER1_type 1 224 0 246 32 0 0 chr17 7103066 7103097 -82401456 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 398 20 20 0 chr17 7103096 7103147 -82401406 + (TA)n Simple_repeat Simple_repeat 1 52 0 2275 111 0 0 chr17 7103506 7103812 -82400741 - AluSg SINE Alu -4 306 1 339 191 236 0 chr17 7104009 7104098 -82400455 + LTR16A1 LTR ERVL 7 116 -341 * 1061 146 18 0 chr17 7104097 7104268 -82400285 + MER58A DNA MER1_type 42 215 -9 752 309 52 4 chr17 7104313 7104582 -82399971 + LTR16A1 LTR ERVL 170 451 -6 2138 123 3 0 chr17 7104915 7105224 -82399329 - AluY SINE Alu -1 310 1 367 304 200 24 chr17 7105303 7105553 -82399000 - L2 LINE L2 0 3272 2979 217 344 64 57 chr17 7106024 7106306 -82398247 - L2 LINE L2 -569 2745 2462 262 268 57 32 chr17 7106333 7106456 -82398097 + MIR3 SINE MIR 72 197 -11 541 295 84 0 chr17 7106465 7106655 -82397898 - MIR SINE MIR -41 221 16 432 318 89 11 chr17 7106962 7107141 -82397412 - MLT1J2 LTR MaLR 0 450 258 2365 77 0 0 chr17 7107156 7107454 -82397099 - AluY SINE Alu -11 300 3 1869 141 3 10 chr17 7107456 7107762 -82396791 - AluSq SINE Alu -9 304 1 979 127 18 6 chr17 7107764 7107929 -82396624 - MER58A DNA MER1_type -8 216 50 359 253 11 23 chr17 7107936 7108023 -82396530 - MER58A DNA MER1_type -12 95 10 255 263 95 80 chr17 7108238 7108375 -82396178 - L2 LINE L2 0 3272 3134 1120 186 4 72 chr17 7108481 7108744 -82395809 + AluJo SINE Alu 55 299 -13 265 286 39 0 chr17 7108766 7108843 -82395710 + L2 LINE L2 3162 3241 -31 180 0 0 0 chr17 7108858 7108878 -82395675 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 2162 88 3 33 chr17 7109141 7109446 -82395107 - AluSx SINE Alu -16 296 1 313 329 18 44 chr17 7109505 7109683 -82394870 - MIR3 SINE MIR -54 154 15 2360 64 0 0 chr17 7109758 7110055 -82394498 - AluY SINE Alu -14 297 1 504 68 0 0 chr17 7110076 7110150 -82394403 - Alu SINE Alu 0 310 237 284 270 99 18 chr17 7110328 7110439 -82394114 + MIR3 SINE MIR 87 206 -2 243 351 9 0 chr17 7111372 7111483 -82393070 - L3 LINE CR1 -36 1541 1430 561 329 50 22 chr17 7111703 7111925 -82392628 - MIR SINE MIR -26 236 9 286 308 55 0 chr17 7112410 7112501 -82392052 - L2 LINE L2 -43 3229 3134 790 311 88 26 chr17 7112665 7112787 -82391766 - LTR33 LTR ERVL -3 518 405 4260 34 4 0 chr17 7112787 7113284 -82391269 + L1PA4 LINE L1 5657 6155 0 790 311 88 26 chr17 7113284 7113615 -82390938 - LTR33 LTR ERVL -116 405 37 3106 293 112 38 chr17 7113662 7114604 -82389949 + HAL1 LINE L1 26 897 -1610 2286 97 0 0 chr17 7114604 7114904 -82389649 + AluSx SINE Alu 1 300 -12 3106 293 112 38 chr17 7114904 7115225 -82389328 + HAL1 LINE L1 897 1193 -1314 2733 106 3 5 chr17 7115225 7115601 -82388952 - THE1C LTR MaLR 0 375 1 3106 293 112 38 chr17 7115601 7115702 -82388851 + HAL1 LINE L1 1193 1285 -1222 2693 154 12 51 chr17 7115702 7116120 -82388433 + MLT1C LTR MaLR 1 399 -68 1748 119 47 72 chr17 7116120 7116439 -82388114 - AluJo SINE Alu -1 311 1 2693 154 12 51 chr17 7116439 7116506 -82388047 + MLT1C LTR MaLR 399 467 0 3106 293 112 38 chr17 7116506 7117024 -82387529 + HAL1 LINE L1 1285 2050 -457 1049 282 102 15 chr17 7117024 7117425 -82387128 - L2 LINE L2 -26 3287 2852 1385 283 54 30 chr17 7117439 7117851 -82386702 - L2 LINE L2 -579 2735 2305 2432 204 24 72 chr17 7117851 7118433 -82386120 + MLT2B3 LTR ERVL 1 554 0 1385 283 54 30 chr17 7118433 7118558 -82385995 - L2 LINE L2 -1009 2305 2185 442 294 23 60 chr17 7118572 7118837 -82385716 + HAL1 LINE L1 2055 2309 -198 2538 133 72 8 chr17 7119188 7119588 -82384965 - MSTA LTR MaLR -2 426 1 405 70 0 0 chr17 7120504 7120561 -82383992 + (TC)n Simple_repeat Simple_repeat 2 58 0 1102 196 18 13 chr17 7120571 7120795 -82383758 - AluJo SINE Alu -14 298 74 806 49 0 0 chr17 7120902 7121004 -82383549 - L1P3 LINE L1 -357 5797 5696 213 342 13 0 chr17 7121084 7121160 -82383393 + MIR3 SINE MIR 101 177 -31 351 142 0 57 chr17 7121249 7121326 -82383227 + MIR SINE MIR 103 172 -90 237 317 39 19 chr17 7121751 7121855 -82382698 + L2 LINE L2 3145 3250 -22 1964 95 29 0 chr17 7121909 7122234 -82382319 + AluSg SINE Alu 1 333 0 230 273 15 0 chr17 7122482 7122548 -82382005 + MIR SINE MIR 65 131 -77 871 73 0 0 chr17 7123327 7123436 -82381117 + AluSq/x SINE Alu 25 133 -179 2009 127 0 10 chr17 7123444 7123743 -82380810 + AluSx SINE Alu 1 296 -16 529 307 111 11 chr17 7123750 7124020 -82380533 - MLT1J2 LTR MaLR -144 306 10 1638 65 9 13 chr17 7125000 7125230 -82379323 + AluSc SINE Alu 1 229 -80 2030 90 0 4 chr17 7125330 7125609 -82378944 - AluSx SINE Alu -34 278 1 2468 289 67 22 chr17 7126433 7127760 -82376793 - L1MEc LINE L1 -4410 1986 600 373 266 276 16 chr17 7127847 7128038 -82376515 - MLT1H1 LTR MaLR -189 366 126 1301 212 146 35 chr17 7128038 7128435 -82376118 + MLT2B1 LTR ERVL 1 441 -79 258 32 0 0 chr17 7128441 7128472 -82376081 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 69 0 0 chr17 7128477 7128506 -82376047 + (TATG)n Simple_repeat Simple_repeat 3 31 0 29 0 0 62 chr17 7128509 7128557 -82375996 + AT_rich Low_complexity Low_complexity 1 45 0 365 197 0 0 chr17 7128573 7128639 -82375914 - Tigger5 DNA MER2_type 0 2323 2258 267 219 141 0 chr17 7128694 7128758 -82375795 - Tigger5 DNA MER2_type 0 2323 2251 246 116 0 0 chr17 7128769 7128812 -82375741 + (TG)n Simple_repeat Simple_repeat 2 44 0 378 0 0 0 chr17 7128913 7128955 -82375598 + (TG)n Simple_repeat Simple_repeat 2 43 0 294 77 0 0 chr17 7128961 7129000 -82375553 + MLT2D LTR ERVL 376 414 0 * 399 240 117 13 chr17 7129000 7129138 -82375415 - MLT1H LTR MaLR -421 174 1 1165 152 165 9 chr17 7129144 7129453 -82375100 + MSTA LTR MaLR 1 406 -26 1991 108 3 3 chr17 7129462 7129748 -82374805 - AluSg SINE Alu -1 309 24 277 139 0 0 chr17 7129755 7129798 -82374755 + MSTA LTR MaLR 386 428 0 1410 257 99 4 chr17 7129800 7130306 -82374247 - MER20B DNA MER1_type -61 722 169 324 331 13 53 chr17 7131847 7131998 -82372555 + L2 LINE L2 2607 2751 -563 228 167 0 91 chr17 7132094 7132160 -82372393 + MIR SINE MIR 132 191 -71 555 85 0 0 chr17 7132205 7132287 -82372266 + (CAT)n Simple_repeat Simple_repeat 1 82 0 537 110 30 0 chr17 7133165 7133265 -82371288 + (TCTA)n Simple_repeat Simple_repeat 2 104 0 268 306 153 8 chr17 7133265 7133389 -82371164 - L2 LINE L2 -4 3309 3168 197 341 57 16 chr17 7134009 7134132 -82370421 - MIR3 SINE MIR -78 130 3 827 200 107 19 chr17 7134225 7134430 -82370123 + MIR SINE MIR 16 238 -24 2205 130 0 13 chr17 7134948 7135256 -82369297 + AluSx SINE Alu 2 305 -7 356 206 66 110 chr17 7135610 7135746 -82368807 + MER91B DNA MER1_type 1 130 -60 342 218 0 12 chr17 7135761 7135842 -82368711 + MER91B DNA MER1_type 90 175 -21 193 148 0 148 chr17 7136886 7136947 -82367606 - MIR SINE MIR -56 206 155 379 211 11 0 chr17 7136954 7137044 -82367509 - MER69A DNA AcHobo -23 154 64 262 141 0 141 chr17 7137064 7137128 -82367425 - MIR SINE MIR -105 157 103 358 257 81 95 chr17 7137706 7137916 -82366637 - HAL1 LINE L1 -1 2506 2300 472 202 0 21 chr17 7138088 7138182 -82366371 - MER66A LTR ERV1 0 478 387 2481 89 0 6 chr17 7138202 7138515 -82366038 + AluSq SINE Alu 1 311 -2 1546 182 42 7 chr17 7138590 7138898 -82365655 - MER66B LTR ERV1 -141 345 27 2319 86 3 26 chr17 7139511 7139824 -82364729 - AluSx SINE Alu -6 306 1 298 211 88 70 chr17 7141015 7141129 -82363424 - MIR3 SINE MIR -6 202 87 626 0 14 0 chr17 7141160 7141234 -82363319 + (TTTTC)n Simple_repeat Simple_repeat 5 79 0 1874 181 65 65 chr17 7141601 7142028 -82362525 - MLT1D LTR MaLR -5 500 71 2408 94 0 0 chr17 7142028 7142327 -82362226 + AluSx SINE Alu 2 300 -12 1874 181 65 65 chr17 7142327 7142392 -82362161 - MLT1D LTR MaLR -433 72 8 418 248 10 10 chr17 7143294 7143395 -82361158 + L2 LINE L2 3209 3309 -4 194 304 18 0 chr17 7143436 7143492 -82361061 - MIR3 SINE MIR -31 177 121 1196 239 64 0 chr17 7143495 7143792 -82360761 + MER90 LTR ERV1 297 612 -2 310 363 73 0 chr17 7144019 7144223 -82360330 - L2 LINE L2 -522 2792 2574 2398 104 0 0 chr17 7144835 7145142 -82359411 - AluSq SINE Alu -6 307 1 1260 239 144 17 chr17 7145257 7145667 -82358886 - MLT1C LTR MaLR -5 462 1 203 357 123 7 chr17 7146802 7146956 -82357597 - L2 LINE L2 -544 2770 2599 579 193 36 94 chr17 7147036 7147228 -82357325 + MER91B DNA MER1_type 4 184 -6 558 254 75 10 chr17 7147760 7147961 -82356592 + LTR33 LTR ERVL 1 214 -307 238 290 122 36 chr17 7149058 7149337 -82355216 - L2 LINE L2 -653 2661 2359 409 306 31 83 chr17 7150090 7150204 -82354349 - MIR SINE MIR 0 262 164 2083 122 7 3 chr17 7150204 7150535 -82354018 - AluSx SINE Alu 0 312 2 409 306 31 83 chr17 7150535 7150649 -82353904 - MIR SINE MIR -98 164 46 2293 119 0 0 chr17 7151186 7151481 -82353072 - AluSx SINE Alu -17 295 1 1395 229 44 11 chr17 7151772 7152135 -82352418 + MER74B LTR ERVL 56 430 -192 336 239 11 34 chr17 7152303 7152391 -82352162 + MER74B LTR ERVL 447 532 -90 2023 135 0 20 chr17 7152677 7152980 -82351573 + AluSx SINE Alu 5 301 -11 874 245 5 33 chr17 7155234 7155398 -82349155 + MIR SINE MIR 45 212 -50 2346 99 3 7 chr17 7155398 7155701 -82348852 + AluSx SINE Alu 1 302 -10 186 43 0 0 chr17 7155701 7155724 -82348829 + (TA)n Simple_repeat Simple_repeat 2 24 0 874 245 5 33 chr17 7155724 7155770 -82348783 + MIR SINE MIR 210 250 -12 203 218 141 39 chr17 7156226 7156304 -82348249 - L2 LINE L2 -3 3310 3225 239 222 0 0 chr17 7156590 7156635 -82347918 - MIR SINE MIR -68 140 96 2247 278 75 56 chr17 7156681 7156866 -82347687 - MER45C DNA AcHobo -628 953 773 2441 100 0 0 chr17 7156866 7157175 -82347378 - AluSc SINE Alu 0 309 1 2247 278 75 56 chr17 7157175 7157807 -82346746 - MER45C DNA AcHobo -808 773 115 2406 98 0 0 chr17 7157807 7158112 -82346441 + AluSx SINE Alu 1 305 -7 2247 278 75 56 chr17 7158112 7158190 -82346363 - MER45C DNA AcHobo -1466 115 40 271 167 114 68 chr17 7158453 7158585 -82345968 + (CTGGGG)n Simple_repeat Simple_repeat 4 141 0 311 296 11 0 chr17 7160586 7160674 -82343879 - L1M4 LINE L1 -2265 3881 3793 196 321 12 37 chr17 7161058 7161139 -82343414 + L2 LINE L2 3194 3272 0 734 213 100 0 chr17 7161991 7162151 -82342402 - MER45A DNA AcHobo 0 178 3 1516 107 158 12 chr17 7162201 7162454 -82342099 + AluSg SINE Alu 1 290 -10 840 172 38 59 chr17 7162967 7163153 -82341400 - MER5A DNA MER1_type -1 188 7 6519 181 52 17 chr17 7163448 7165613 -82338940 + L1MB7 LINE L1 3793 6047 -137 2374 104 0 13 chr17 7165613 7165929 -82338624 + AluSx SINE Alu 1 312 0 6519 181 52 17 chr17 7165929 7166052 -82338501 + L1MB7 LINE L1 6047 6164 -20 183 42 0 0 chr17 7166371 7166395 -82338158 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1169 170 43 0 chr17 7166399 7166587 -82337966 + AluJo SINE Alu 1 196 -116 2544 65 0 3 chr17 7166782 7167092 -82337461 + AluY SINE Alu 1 309 -2 961 131 0 14 chr17 7167248 7167393 -82337160 + FLAM_C SINE Alu 1 143 0 366 354 65 10 chr17 7167404 7167712 -82336841 + HAL1 LINE L1 1442 1766 -741 1876 179 3 3 chr17 7168052 7168360 -82336193 - AluJo SINE Alu -4 308 1 380 301 118 71 chr17 7168499 7168821 -82335732 + L1M4 LINE L1 2648 2984 -3162 305 197 14 0 chr17 7168821 7168892 -82335661 - MER69 DNA AcHobo 0 2526 2455 637 287 78 41 chr17 7169014 7169258 -82335295 + L1M4 LINE L1 3026 3278 -2868 2855 32 0 0 chr17 7169556 7169871 -82334682 + AluYb8 SINE Alu 1 315 -3 1315 73 6 0 chr17 7169871 7170035 -82334518 + AluY SINE Alu 133 297 -14 2016 108 0 0 chr17 7170048 7170299 -82334254 + AluSq SINE Alu 1 251 -62 2581 157 8 26 chr17 7170399 7170844 -82333709 + L1MB3 LINE L1 5695 6132 -51 2389 98 0 0 chr17 7170844 7171140 -82333413 + AluSx SINE Alu 1 296 -16 2581 157 8 26 chr17 7171140 7171190 -82333363 + L1MB3 LINE L1 6132 6181 -2 266 209 22 33 chr17 7171196 7171287 -82333266 + (TAA)n Simple_repeat Simple_repeat 3 92 0 24 0 0 0 chr17 7171327 7171351 -82333202 + AT_rich Low_complexity Low_complexity 1 24 0 232 329 76 55 chr17 7171603 7171986 -82332567 + L1MEd LINE L1 330 720 -5399 252 0 0 0 chr17 7172001 7172029 -82332524 + (CA)n Simple_repeat Simple_repeat 1 28 0 288 303 52 32 chr17 7172141 7172296 -82332257 - L2 LINE L2 -932 2382 2225 192 364 65 48 chr17 7172459 7172690 -82331863 + L2 LINE L2 3035 3269 -3 488 276 98 6 chr17 7172974 7173137 -82331416 - MIR SINE MIR -52 210 33 292 318 55 0 chr17 7173649 7173759 -82330794 + MIR SINE MIR 30 145 -63 197 220 40 90 chr17 7174122 7174222 -82330331 + MIR SINE MIR 45 139 -69 394 257 140 0 chr17 7175506 7175642 -82328911 + MIR SINE MIR 65 219 -43 739 226 94 28 chr17 7176697 7176909 -82327644 - MIR SINE MIR -9 253 28 401 281 166 5 chr17 7177287 7177486 -82327067 + MIR SINE MIR 13 243 -19 353 298 6 0 chr17 7178477 7178638 -82325915 + (TG)n Simple_repeat Simple_repeat 1 162 0 256 253 0 53 chr17 7178639 7178734 -82325819 + CT-rich Low_complexity Low_complexity 4 93 0 231 36 0 0 chr17 7178841 7178869 -82325684 + (CA)n Simple_repeat Simple_repeat 2 29 0 2208 112 3 3 chr17 7179351 7179646 -82324907 + AluSg SINE Alu 1 295 -15 326 266 52 32 chr17 7180076 7180225 -82324328 - MIR3 SINE MIR -52 156 33 405 241 58 89 chr17 7181797 7181863 -82322690 + L2 LINE L2 2848 2915 -398 2246 108 0 10 chr17 7181863 7182159 -82322394 + AluSq SINE Alu 5 297 -16 405 241 58 89 chr17 7182159 7182316 -82322237 + L2 LINE L2 2915 3064 -249 2689 239 61 28 chr17 7182366 7182607 -82321946 - L1ME1 LINE L1 -6 6160 5920 802 277 67 65 chr17 7182607 7183001 -82321552 - L1PB3 LINE L1 -229 5925 5533 2197 117 3 0 chr17 7183001 7183300 -82321253 - AluSp SINE Alu -13 300 1 802 277 67 65 chr17 7183300 7183488 -82321065 - L1PB3 LINE L1 -621 5533 5333 2067 124 24 7 chr17 7183488 7183786 -82320767 - AluSg SINE Alu -7 303 1 802 277 67 65 chr17 7183786 7183838 -82320715 - L1PB3 LINE L1 -821 5333 5283 259 288 55 52 chr17 7183841 7183976 -82320577 + L2 LINE L2 3138 3313 0 311 271 124 39 chr17 7183980 7184109 -82320444 + MIR3 SINE MIR 49 188 -20 229 281 27 96 chr17 7184568 7184714 -82319839 + MIR3 SINE MIR 19 154 -54 189 0 0 0 chr17 7185345 7185366 -82319187 + (GGCTG)n Simple_repeat Simple_repeat 5 25 0 1063 75 0 0 chr17 7185675 7185808 -82318745 + AluSq/x SINE Alu 1 133 -180 2075 135 0 19 chr17 7185814 7186132 -82318421 + AluSx SINE Alu 1 312 0 339 247 21 11 chr17 7186672 7186765 -82317788 - MIR SINE MIR -74 134 41 1879 65 47 127 chr17 7187285 7187624 -82316929 - AluSx SINE Alu 0 312 1 376 326 22 14 chr17 7187701 7187839 -82316714 + L2 LINE L2 3119 3257 -15 486 255 131 38 chr17 7188412 7188679 -82315874 - MLT1I LTR MaLR -1 408 117 203 286 29 14 chr17 7188743 7188813 -82315740 + MIR3 SINE MIR 118 188 -20 921 191 105 49 chr17 7189382 7189706 -82314847 + L1M4 LINE L1 4125 4466 -1680 208 328 50 42 chr17 7190255 7190374 -82314179 - L2 LINE L2 -43 3229 3110 2356 84 0 0 chr17 7190699 7190997 -82313556 - AluSq SINE Alu -15 298 1 294 29 0 0 chr17 7191325 7191360 -82313193 + (TG)n Simple_repeat Simple_repeat 1 35 0 319 278 68 25 chr17 7191410 7191572 -82312981 - L2 LINE L2 -338 2975 2807 215 359 0 0 chr17 7191563 7191627 -82312926 + L3 LINE CR1 1505 1568 -9 * 319 338 26 7 chr17 7191899 7192050 -82312503 - MIR SINE MIR -3 259 106 486 294 114 5 chr17 7192536 7192747 -82311806 + MIR SINE MIR 3 236 -26 919 127 0 22 chr17 7192930 7193064 -82311489 - FLAM_C SINE Alu 0 133 3 201 121 0 0 chr17 7193389 7193422 -82311131 + (CAGA)n Simple_repeat Simple_repeat 3 35 0 1718 165 0 28 chr17 7194283 7194604 -82309949 + AluJo SINE Alu 1 312 0 270 0 0 0 chr17 7194666 7194696 -82309857 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 309 89 0 0 chr17 7194695 7194740 -82309813 + (CA)n Simple_repeat Simple_repeat 1 45 0 309 89 0 0 chr17 7194888 7194933 -82309620 + (CA)n Simple_repeat Simple_repeat 1 45 0 605 280 60 10 chr17 7195112 7195312 -82309241 + MIR SINE MIR 39 248 -14 366 326 72 54 chr17 7195567 7195972 -82308581 + L2 LINE L2 2834 3245 -27 2127 98 0 7 chr17 7196771 7197066 -82307487 + AluSx SINE Alu 9 301 -11 241 319 8 24 chr17 7197123 7197236 -82307317 - MIR SINE MIR -68 140 76 258 32 0 0 chr17 7197761 7197792 -82306761 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 2124 70 29 0 chr17 7197794 7198067 -82306486 - AluSp SINE Alu -32 281 1 344 181 134 79 chr17 7200080 7200207 -82304346 - MIR3 SINE MIR -17 191 58 415 279 16 16 chr17 7200264 7200393 -82304160 + MIR SINE MIR 49 177 -85 2335 66 0 16 chr17 7201115 7201418 -82303135 + AluY SINE Alu 1 298 -13 728 202 0 16 chr17 7201634 7201763 -82302790 + FLAM_C SINE Alu 3 129 -4 27 0 0 0 chr17 7201764 7201791 -82302762 + AT_rich Low_complexity Low_complexity 1 27 0 207 259 59 37 chr17 7201986 7202121 -82302432 + MIR3 SINE MIR 61 198 -10 2360 82 0 13 chr17 7202793 7203108 -82301445 - AluY SINE Alu 0 311 1 258 204 19 0 chr17 7203527 7203581 -82300972 + MER91B DNA MER1_type 8 62 -128 267 305 42 0 chr17 7203883 7203978 -82300575 + MIR3 SINE MIR 110 208 0 2083 132 3 3 chr17 7204075 7204386 -82300167 + AluSx SINE Alu 1 311 -1 273 321 107 15 chr17 7204729 7204950 -82299603 + MIR SINE MIR 1 252 -10 183 42 0 0 chr17 7205008 7205032 -82299521 + (CA)n Simple_repeat Simple_repeat 1 24 0 252 200 14 71 chr17 7205688 7205758 -82298795 + L2 LINE L2 3206 3271 -1 23 54 0 0 chr17 7206383 7206420 -82298133 + GC_rich Low_complexity Low_complexity 1 37 0 180 125 36 18 chr17 7206549 7206605 -82297948 + (CCG)n Simple_repeat Simple_repeat 3 59 0 33 56 0 0 chr17 7206624 7206678 -82297875 + GC_rich Low_complexity Low_complexity 1 54 0 226 217 33 22 chr17 7206697 7206789 -82297764 + (CCCCG)n Simple_repeat Simple_repeat 4 96 0 454 275 26 96 chr17 7207695 7207924 -82296629 - L3 LINE CR1 -72 1505 1293 218 180 16 0 chr17 7208624 7208685 -82295868 + (TG)n Simple_repeat Simple_repeat 1 62 0 452 393 32 8 chr17 7209607 7209854 -82294699 + L3 LINE CR1 275 527 -1050 186 256 0 0 chr17 7210009 7210052 -82294501 + L3 LINE CR1 751 793 -784 253 246 15 0 chr17 7210052 7210117 -82294436 + L3 LINE CR1 752 817 -760 1058 110 6 0 chr17 7210543 7210716 -82293837 + (TCC)n Simple_repeat Simple_repeat 2 175 0 937 140 17 3 chr17 7210749 7211103 -82293450 + CT-rich Low_complexity Low_complexity 1 359 0 2042 107 43 0 chr17 7211674 7211973 -82292580 - AluSx SINE Alu 0 312 1 507 345 45 27 chr17 7212080 7212416 -82292137 - L1MC4a LINE L1 -1911 5897 5556 1947 111 6 52 chr17 7212503 7212828 -82291725 + AluSq SINE Alu 1 310 -3 2140 94 44 0 chr17 7212976 7213273 -82291280 + AluSx SINE Alu 1 310 -2 2288 85 3 0 chr17 7213626 7213933 -82290620 + AluSg SINE Alu 1 308 -2 2453 67 0 3 chr17 7214140 7214452 -82290101 + AluY SINE Alu 1 311 0 751 244 15 79 chr17 7214474 7214740 -82289813 - MIR SINE MIR 0 262 14 249 285 66 53 chr17 7215758 7215909 -82288644 - MIR3 SINE MIR -54 154 2 248 308 28 9 chr17 7216102 7216209 -82288344 - LTR67 LTR ERVL -21 536 428 1965 138 13 0 chr17 7216219 7216341 -82288212 + AluSx SINE Alu 1 120 -192 189 0 0 0 chr17 7216341 7216362 -82288191 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1965 138 13 0 chr17 7216362 7216537 -82288016 + AluSx SINE Alu 120 302 -10 344 274 120 8 chr17 7217487 7217604 -82286949 + MIR SINE MIR 19 148 -60 2382 71 0 0 chr17 7217697 7218007 -82286546 - AluSg SINE Alu 0 310 1 2383 96 0 0 chr17 7219525 7219837 -82284716 - AluSx SINE Alu 0 312 1 1086 279 56 37 chr17 7219926 7220303 -82284250 + MLT1K LTR MaLR 1 384 -204 265 310 95 0 chr17 7220695 7220811 -82283742 + MIR SINE MIR 92 218 -44 1120 96 30 0 chr17 7220977 7221170 -82283383 + AluSg/x SINE Alu 140 337 0 195 320 0 39 chr17 7221182 7221260 -82283293 + L2 LINE L2 3188 3262 -10 473 295 42 12 chr17 7221350 7221516 -82283037 + MIR SINE MIR 1 171 -91 553 223 47 27 chr17 7221820 7221968 -82282585 - MIR SINE MIR -2 260 110 201 220 9 119 chr17 7224602 7224711 -82279842 - L2 LINE L2 -1 3312 3216 674 239 55 0 chr17 7225306 7225469 -82279084 + MIR SINE MIR 91 262 0 2152 97 0 13 chr17 7227194 7227502 -82277051 + AluSx SINE Alu 1 304 -8 2449 50 0 7 chr17 7227656 7227955 -82276598 - AluY SINE Alu -14 297 1 288 0 0 0 chr17 7228239 7228271 -82276282 + (CA)n Simple_repeat Simple_repeat 2 33 0 4607 188 173 39 chr17 7228314 7229879 -82274674 - L1MC4 LINE L1 -216 7826 6024 992 300 144 29 chr17 7229873 7231189 -82273364 - L1MEc LINE L1 -4074 2236 770 * 251 345 0 0 chr17 7231256 7231343 -82273210 - L1MEc LINE L1 -5472 647 561 1979 241 86 93 chr17 7231764 7232188 -82272365 - HAL1 LINE L1 -461 2046 1621 1465 153 42 0 chr17 7232188 7232429 -82272124 - AluJo SINE Alu -59 253 3 1979 241 86 93 chr17 7232429 7233242 -82271311 - HAL1 LINE L1 -886 1621 817 552 272 97 53 chr17 7233240 7233279 -82271274 - HAL1 LINE L1 -2150 357 321 * 2379 150 67 12 chr17 7233279 7233685 -82270868 + MSTA LTR MaLR 1 428 0 552 272 97 53 chr17 7233685 7233987 -82270566 - HAL1 LINE L1 -2186 321 1 2127 118 10 0 chr17 7234303 7234613 -82269940 + AluSx SINE Alu 12 302 -10 679 316 51 40 chr17 7235079 7235548 -82269005 + HAL1 LINE L1 1 474 -2033 1031 267 119 38 chr17 7235549 7236070 -82268483 + HAL1 LINE L1 1585 2147 -360 1929 176 38 27 chr17 7236431 7236800 -82267753 + MLT1A2 LTR MaLR 1 373 -1 881 0 0 52 chr17 7238313 7238449 -82266104 + (GAA)n Simple_repeat Simple_repeat 1 129 0 194 315 61 88 chr17 7239186 7239516 -82265037 - L2 LINE L2 -26 3246 2926 906 253 36 44 chr17 7239897 7240261 -82264292 + L1ME2 LINE L1 4886 5246 -900 541 143 151 0 chr17 7240300 7240426 -82264127 + L1MB7 LINE L1 6040 6184 0 604 220 60 0 chr17 7240442 7240592 -82263961 + L1ME2 LINE L1 5232 5390 -756 349 227 77 56 chr17 7240593 7240945 -82263608 + AluSx SINE Alu 1 182 -120 1762 160 14 3 chr17 7240945 7241239 -82263314 + AluSx SINE Alu 1 297 -15 615 250 152 23 chr17 7241256 7241512 -82263041 + L1ME2 LINE L1 5440 5728 -2267 710 198 62 51 chr17 7241513 7241690 -82262863 + MLT1D LTR MaLR 305 483 -22 1041 190 144 9 chr17 7241743 7242035 -82262518 + L1ME2 LINE L1 5835 6164 0 344 266 53 39 chr17 7242073 7242280 -82262273 + L1MC4 LINE L1 7832 8041 -1 451 176 7 3 chr17 7242597 7242754 -82261799 + MER3 DNA MER1_type 1 203 -6 466 233 30 30 chr17 7242920 7243053 -82261500 + MIR3 SINE MIR 30 162 -46 243 266 76 38 chr17 7243327 7243406 -82261147 - MIR SINE MIR -147 115 34 223 170 0 21 chr17 7243688 7243735 -82260818 + (GGGTG)n Simple_repeat Simple_repeat 4 49 0 548 286 66 31 chr17 7244341 7244537 -82260016 + MIR SINE MIR 48 250 -12 263 256 0 12 chr17 7244571 7244657 -82259896 + L1P5 LINE L1 5346 5430 -721 289 286 29 0 chr17 7244754 7244859 -82259694 + L1MC4a LINE L1 5796 5903 -1905 368 273 11 0 chr17 7246886 7246974 -82257579 + MIR3 SINE MIR 79 167 -41 452 211 32 0 chr17 7247953 7248048 -82256505 - MER5A DNA MER1_type -80 109 12 421 220 214 29 chr17 7248125 7248298 -82256255 + HAL1 LINE L1 7 211 -2296 763 44 0 0 chr17 7248300 7248390 -82256163 - 5S rRNA rRNA -31 90 1 1214 268 82 31 chr17 7248390 7248901 -82255652 + HAL1 LINE L1 202 738 -1769 3306 216 65 22 chr17 7248908 7250142 -82254411 + L1ME2 LINE L1 4902 6333 -1 306 290 21 11 chr17 7250156 7250249 -82254304 + HAL1 LINE L1 776 869 -1638 1025 229 64 74 chr17 7250289 7250788 -82253765 + HAL1 LINE L1 971 1464 -1043 1961 199 43 21 chr17 7250832 7251250 -82253303 + L1MDa LINE L1 17 443 -6097 1366 165 30 33 chr17 7251280 7251583 -82252970 + L1MD1 LINE L1 5446 5747 -495 1087 121 0 0 chr17 7251583 7251724 -82252829 - AluJb SINE Alu -15 297 157 1971 172 135 31 chr17 7251726 7252179 -82252374 + L1MD1 LINE L1 5742 6241 -1 549 128 35 106 chr17 7252174 7252315 -82252238 + HAL1 LINE L1 1566 1696 -811 * 785 114 16 32 chr17 7252324 7252447 -82252106 + FLAM_C SINE Alu 19 139 -4 232 317 24 0 chr17 7252452 7252534 -82252019 + HAL1 LINE L1 1692 1775 -732 254 300 8 42 chr17 7253027 7253147 -82251406 + L1ME2 LINE L1 5966 6081 -83 326 376 143 8 chr17 7253257 7253515 -82251038 + L3 LINE CR1 1284 1576 -1 247 330 112 86 chr17 7255142 7255375 -82249178 + L2 LINE L2 2945 3183 -89 197 292 233 8 chr17 7256343 7256463 -82248090 + MIR3 SINE MIR 16 162 -46 372 233 68 53 chr17 7256923 7257056 -82247497 - L2 LINE L2 0 3313 3179 28 29 0 0 chr17 7257742 7257777 -82246776 + AT_rich Low_complexity Low_complexity 1 35 0 1708 134 4 8 chr17 7257845 7258099 -82246454 - AluJo SINE Alu 0 312 60 1907 146 31 0 chr17 7258642 7258929 -82245624 - AluJo SINE Alu -15 297 2 25 51 0 0 chr17 7259085 7259124 -82245429 + AT_rich Low_complexity Low_complexity 1 39 0 184 297 94 16 chr17 7259143 7259207 -82245346 + MIR SINE MIR 25 93 -169 277 345 75 51 chr17 7259662 7259924 -82244629 + L2 LINE L2 2444 2698 -616 2160 118 0 0 chr17 7259924 7260212 -82244341 + AluSq SINE Alu 1 288 -25 189 94 0 0 chr17 7260218 7260250 -82244303 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 277 345 75 51 chr17 7260250 7260313 -82244240 + L2 LINE L2 2702 2784 -530 997 285 142 34 chr17 7260313 7261900 -82242653 + L1ME3A LINE L1 4162 5929 -233 544 156 0 11 chr17 7262050 7262140 -82242413 + Tigger7 DNA MER2_type 22 110 -595 2364 91 0 0 chr17 7262140 7262437 -82242116 - AluSx SINE Alu -15 297 1 1044 96 0 7 chr17 7262437 7262573 -82241980 - AluSq/x SINE Alu -177 135 1 1214 188 14 5 chr17 7262588 7262811 -82241742 + Tigger7 DNA MER2_type 201 425 -308 1342 83 0 0 chr17 7262811 7262980 -82241573 + AluY SINE Alu 140 308 -3 330 248 102 80 chr17 7263839 7263881 -82240672 - MIR3 SINE MIR -52 156 116 2171 120 0 3 chr17 7263881 7264180 -82240373 + AluSx SINE Alu 1 298 -14 330 248 102 80 chr17 7264180 7264274 -82240279 - MIR3 SINE MIR -92 116 17 214 345 126 8 chr17 7264547 7264666 -82239887 - L2 LINE L2 -6 3266 3134 388 242 11 22 chr17 7264779 7264870 -82239683 + MER21B LTR ERV1 1 90 -773 3585 188 98 29 chr17 7264892 7265159 -82239394 + MER21B LTR ERV1 19 266 -597 2377 94 3 0 chr17 7265159 7265467 -82239086 + AluSp SINE Alu 1 309 -4 3585 188 98 29 chr17 7265467 7265988 -82238565 + MER21B LTR ERV1 266 861 -2 2281 111 0 3 chr17 7266285 7266583 -82237970 + AluSx SINE Alu 1 297 -15 2242 55 0 4 chr17 7266752 7267023 -82237530 - AluSg SINE Alu -40 270 1 2278 92 0 0 chr17 7267747 7268062 -82236491 + AluSx SINE Alu 1 315 0 2072 111 48 3 chr17 7268499 7268788 -82235765 + AluSx SINE Alu 1 302 -10 883 143 12 20 chr17 7268822 7269066 -82235487 + GA-rich Low_complexity Low_complexity 1 242 0 442 261 85 20 chr17 7269188 7269341 -82235212 + L1ME3A LINE L1 5989 6151 -19 1787 170 0 0 chr17 7269341 7269630 -82234923 - AluJo SINE Alu -19 293 5 342 185 46 0 chr17 7269758 7269823 -82234730 - HsTC2 DNA Tc2 -3 1895 1828 533 335 62 21 chr17 7269961 7270298 -82234255 + L1MC/D LINE L1 5292 5642 -2166 216 97 0 0 chr17 7270325 7270356 -82234197 + (TA)n Simple_repeat Simple_repeat 1 31 0 507 312 55 18 chr17 7273701 7273919 -82230634 - L2 LINE L2 -427 2887 2662 321 26 0 0 chr17 7274444 7274482 -82230071 + (CA)n Simple_repeat Simple_repeat 1 38 0 211 250 68 57 chr17 7275021 7275109 -82229444 - L3 LINE CR1 -151 1426 1338 2217 112 7 7 chr17 7275292 7275595 -82228958 + AluSx SINE Alu 1 303 -9 1657 149 91 0 chr17 7275632 7275908 -82228645 - AluSx SINE Alu -11 301 1 301 281 70 9 chr17 7276527 7276641 -82227912 + MER5C DNA MER1_type 1 121 -203 336 181 19 67 chr17 7276653 7276758 -82227795 + MER5C DNA MER1_type 225 324 0 307 322 17 17 chr17 7279330 7279504 -82225049 - L1ME LINE L1 -364 5757 5584 1462 156 0 13 chr17 7279803 7280055 -82224498 + AluSx SINE Alu 61 309 0 1152 211 97 20 chr17 7280067 7280365 -82224188 + L1MC4 LINE L1 5296 5616 -2192 383 186 72 10 chr17 7280370 7280467 -82224086 - MER50 LTR ERV1 -150 584 482 5907 200 71 74 chr17 7280467 7281792 -82222761 + L1MC4 LINE L1 5620 6870 -1125 1870 100 34 65 chr17 7281792 7282108 -82222445 - AluSx SINE Alu 0 307 1 5907 200 71 74 chr17 7282108 7283230 -82221323 + L1MC4 LINE L1 6870 7993 -2 3207 206 36 16 chr17 7283241 7283935 -82220618 + L1ME2 LINE L1 5431 6138 -26 2484 90 0 3 chr17 7283999 7284310 -82220243 - AluSx SINE Alu -2 310 1 630 324 62 35 chr17 7284555 7284895 -82219658 + L1MC4 LINE L1 7694 8042 0 201 74 0 0 chr17 7286406 7286433 -82218120 + (CA)n Simple_repeat Simple_repeat 2 28 0 406 258 101 22 chr17 7293524 7293703 -82210850 + MIR SINE MIR 49 256 -6 246 305 4 26 chr17 7294745 7294839 -82209714 - MIR SINE MIR -67 141 48 3063 222 131 12 chr17 7295007 7295968 -82208585 + L1MC4 LINE L1 6393 7467 -575 799 246 135 3 chr17 7295955 7296244 -82208309 + L1MD3 LINE L1 7657 7983 -12 * 4057 175 47 56 chr17 7296289 7297267 -82207286 + LTR5 LTR ERVK 1 969 0 405 262 248 0 chr17 7297342 7297483 -82207070 - MER5A DNA MER1_type 0 189 14 314 270 0 0 chr17 7297665 7297739 -82206814 + MIR SINE MIR 68 141 -121 506 263 154 65 chr17 7297816 7298231 -82206322 + L3 LINE CR1 726 1177 -400 569 276 58 45 chr17 7298293 7298536 -82206017 - MER102b DNA MER1_type -48 293 48 471 275 191 11 chr17 7298571 7298844 -82205709 + L3 LINE CR1 1254 1575 -2 204 67 0 0 chr17 7299113 7299143 -82205410 + (T)n Simple_repeat Simple_repeat 1 30 0 282 234 0 0 chr17 7299250 7299314 -82205239 + MIR SINE MIR 185 248 -14 723 287 42 87 chr17 7299459 7299814 -82204739 - L2 LINE L2 -446 2868 2530 1980 51 0 8 chr17 7300810 7301047 -82203506 + AluY SINE Alu 67 301 -10 1018 267 75 20 chr17 7302841 7302875 -82201678 - L2 LINE L2 -17 3296 3265 2172 115 46 0 chr17 7302875 7303224 -82201329 - MER47A DNA MER2_type -1 365 1 1018 267 75 20 chr17 7303224 7303791 -82200762 - L2 LINE L2 -48 3265 2670 908 161 8 128 chr17 7303797 7304046 -82200507 + MER20 DNA MER1_type 1 219 0 196 103 0 0 chr17 7305407 7305436 -82199117 + MIR SINE MIR 224 252 -10 203 354 0 0 chr17 7305856 7305938 -82198615 + C-rich Low_complexity Low_complexity 6 87 0 200 103 0 0 chr17 7306228 7306257 -82198296 + MIR SINE MIR 224 252 -10 2373 100 0 0 chr17 7308098 7308389 -82196164 + AluSc SINE Alu 2 292 -17 405 286 2 24 chr17 7309161 7309313 -82195240 + MIR SINE MIR 16 160 -48 1839 146 3 48 chr17 7309326 7309635 -82194918 + AluJb SINE Alu 1 295 -17 446 0 19 0 chr17 7309701 7309755 -82194798 + (TC)n Simple_repeat Simple_repeat 2 56 0 205 284 0 15 chr17 7310951 7311018 -82193535 + G-rich Low_complexity Low_complexity 2 67 0 796 271 19 25 chr17 7311344 7311652 -82192901 - L1MEc LINE L1 -5966 430 44 986 149 14 0 chr17 7311907 7312114 -82192439 - AluSx SINE Alu 0 349 141 611 99 0 0 chr17 7312114 7312195 -82192358 - AluSx SINE Alu -231 82 2 468 212 128 33 chr17 7312342 7312598 -82191955 + LTR50 LTR ERVL 216 586 -209 293 244 99 45 chr17 7312614 7312815 -82191738 - L1M4 LINE L1 -747 5399 5188 409 218 23 68 chr17 7312948 7313081 -82191472 - MER112 DNA MER1_type -6 254 128 185 105 0 53 chr17 7313089 7313127 -82191426 + (GGAA)n Simple_repeat Simple_repeat 4 39 0 1961 91 76 0 chr17 7313141 7313433 -82191120 - AluSx SINE Alu 0 312 1 219 239 76 65 chr17 7314190 7314282 -82190271 - MIR3 SINE MIR -35 173 81 2414 94 0 0 chr17 7314407 7314705 -82189848 + AluSc SINE Alu 1 298 -11 235 289 26 26 chr17 7314775 7314851 -82189702 - ORSL DNA AcHobo 0 275 200 2059 173 66 12 chr17 7314915 7315325 -82189228 + MSTB1 LTR MaLR 1 432 0 2161 118 0 37 chr17 7315553 7315874 -82188679 - AluSx SINE Alu -3 309 1 287 100 0 0 chr17 7315874 7315914 -82188639 - Alu SINE Alu -259 41 2 252 188 318 0 chr17 7315915 7316000 -82188553 - MER112 DNA MER1_type -141 119 8 1823 121 38 11 chr17 7316384 7316648 -82187905 - AluSx SINE Alu -41 271 1 631 245 159 14 chr17 7316674 7316882 -82187671 - MIR SINE MIR -10 252 15 224 261 204 13 chr17 7316993 7317150 -82187403 + L3 LINE CR1 1192 1378 -199 2345 98 0 0 chr17 7317181 7317476 -82187077 + AluSg SINE Alu 1 295 -15 2182 127 3 3 chr17 7318355 7318662 -82185891 - AluSg SINE Alu -3 307 1 517 258 108 27 chr17 7318667 7318853 -82185700 + L2 LINE L2 3113 3313 0 2391 97 13 0 chr17 7320195 7320494 -82184059 - AluSx SINE Alu -9 303 1 749 316 22 26 chr17 7320582 7320895 -82183658 - L1ME LINE L1 -426 5695 5384 2504 79 0 3 chr17 7321978 7322283 -82182270 - AluSg SINE Alu -6 304 1 242 243 65 19 chr17 7322329 7322436 -82182117 - L1ME4a LINE L1 -11 6110 5999 232 293 115 5 chr17 7322490 7322681 -82181872 - L1ME4a LINE L1 -218 5903 5692 2088 120 0 17 chr17 7322682 7322981 -82181572 + AluSx SINE Alu 1 294 -18 1030 125 0 80 chr17 7322983 7323159 -82181394 + AluSg/x SINE Alu 138 299 -13 322 266 126 14 chr17 7323159 7323302 -82181251 - L1ME4a LINE L1 -412 5709 5551 267 278 106 100 chr17 7323461 7323554 -82180999 - MIR SINE MIR -62 200 104 2429 74 0 35 chr17 7323554 7323865 -82180688 + AluSq SINE Alu 1 300 -13 267 278 106 100 chr17 7323865 7323951 -82180602 - MIR SINE MIR -158 104 20 279 274 45 101 chr17 7325231 7325410 -82179143 - MIR SINE MIR -37 225 57 183 284 198 0 chr17 7325784 7325865 -82178688 + L2 LINE L2 3162 3258 -14 183 294 103 0 chr17 7325975 7326043 -82178510 + L2 LINE L2 3149 3223 -49 216 97 0 0 chr17 7326098 7326129 -82178424 + (CA)n Simple_repeat Simple_repeat 1 31 0 494 262 70 60 chr17 7328499 7328791 -82175762 - L2 LINE L2 -69 3244 2947 1051 207 4 40 chr17 7328791 7329018 -82175535 + MER20 DNA MER1_type 1 219 0 180 0 0 0 chr17 7329075 7329095 -82175458 + (T)n Simple_repeat Simple_repeat 1 20 0 656 172 37 15 chr17 7329294 7329428 -82175125 + AluSg/x SINE Alu 135 271 -39 335 291 99 0 chr17 7329450 7329591 -82174962 + L1MC/D LINE L1 5655 5809 -1999 2396 47 0 7 chr17 7329593 7329871 -82174682 + AluY SINE Alu 17 292 -19 1598 216 100 10 chr17 7329899 7330381 -82174172 + L1ME2 LINE L1 5633 6157 -7 2005 65 4 0 chr17 7330402 7330649 -82173904 - AluY SINE Alu -63 248 1 2035 115 21 7 chr17 7331490 7331777 -82172776 - AluSg1 SINE Alu -18 291 1 259 183 133 0 chr17 7332484 7332544 -82172009 - MIR3 SINE MIR -29 179 112 810 282 103 46 chr17 7332771 7333335 -82171218 + MLT1L LTR MaLR 6 601 -14 223 337 32 11 chr17 7333356 7333451 -82171102 - MIR3 SINE MIR -102 106 10 441 315 22 28 chr17 7334312 7334490 -82170063 + MIR SINE MIR 20 196 -66 279 333 79 9 chr17 7336659 7336773 -82167780 - L3 LINE CR1 -1271 306 185 297 254 0 0 chr17 7337792 7337851 -82166702 - L2 LINE L2 -4 3309 3251 267 208 0 0 chr17 7338058 7338111 -82166442 + L2 LINE L2 3261 3313 0 420 245 7 0 chr17 7338171 7338311 -82166242 + L1ME4a LINE L1 5685 5828 -293 2435 76 0 3 chr17 7338392 7338683 -82165870 + AluSq SINE Alu 1 290 -23 686 269 108 11 chr17 7338824 7339110 -82165443 - L1ME4a LINE L1 -248 5873 5560 306 0 0 0 chr17 7339967 7340001 -82164552 + (A)n Simple_repeat Simple_repeat 1 34 0 442 336 36 38 chr17 7340868 7341285 -82163268 + L2 LINE L2 2097 2512 -802 373 310 66 10 chr17 7341377 7341574 -82162979 - L2 LINE L2 -1103 2211 2004 269 349 38 9 chr17 7341900 7342006 -82162547 + L2 LINE L2 3133 3241 -31 1368 105 4 0 chr17 7342011 7342261 -82162292 + (TGGA)n Simple_repeat Simple_repeat 1 251 0 226 296 102 11 chr17 7342261 7342349 -82162204 - L2 LINE L2 0 3313 3218 226 370 73 12 chr17 7342723 7342888 -82161665 - L2 LINE L2 0 3272 3098 468 0 0 0 chr17 7343084 7343136 -82161417 + (CA)n Simple_repeat Simple_repeat 2 53 0 629 313 103 17 chr17 7343165 7343698 -82160855 + L1ME4a LINE L1 5405 5983 -138 2271 92 24 3 chr17 7344242 7344534 -82160019 + AluSg SINE Alu 1 298 -12 2305 103 0 3 chr17 7345296 7345596 -82158957 - AluSx SINE Alu -13 299 1 830 292 4 26 chr17 7348487 7348661 -82155892 + MIR SINE MIR 35 204 -58 2117 122 0 25 chr17 7348661 7349027 -82155526 + AluSx SINE Alu 1 312 0 830 292 4 26 chr17 7349027 7349085 -82155468 + MIR SINE MIR 204 262 0 209 222 0 0 chr17 7349316 7349361 -82155192 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2384 94 0 0 chr17 7349379 7349676 -82154877 - AluSx SINE Alu -15 297 1 1138 82 0 0 chr17 7349676 7349811 -82154742 - AluSq/x SINE Alu -178 135 1 231 224 167 32 chr17 7350642 7350798 -82153755 - L2 LINE L2 -238 3034 2858 2249 104 3 0 chr17 7351335 7351634 -82152919 + AluSg SINE Alu 1 300 -10 237 180 0 0 chr17 7354122 7354172 -82150381 + CT-rich Low_complexity Low_complexity 2 51 0 293 270 73 73 chr17 7354607 7354907 -82149646 + L2 LINE L2 2949 3248 -24 573 308 59 0 chr17 7355741 7355957 -82148596 + MIR SINE MIR 7 246 -16 204 214 0 0 chr17 7357259 7357301 -82147252 + CT-rich Low_complexity Low_complexity 1 42 0 383 185 50 8 chr17 7357385 7357504 -82147049 + GA-rich Low_complexity Low_complexity 3 126 0 21 0 0 0 chr17 7357525 7357546 -82147007 + AT_rich Low_complexity Low_complexity 1 21 0 957 155 0 0 chr17 7357573 7357816 -82146737 + L1PB3 LINE L1 5859 6151 -3 2166 112 17 0 chr17 7357877 7358173 -82146380 - AluSq SINE Alu -12 301 1 3036 173 17 6 chr17 7358335 7358877 -82145676 - MER6A DNA MER2_type 0 605 58 713 151 0 0 chr17 7358888 7359007 -82145546 - AluJb SINE Alu -4 308 190 370 152 0 80 chr17 7359008 7359083 -82145470 - MER6 DNA MER2_type -82 62 -1 2285 96 0 0 chr17 7359150 7359473 -82145080 - AluSc SINE Alu 0 323 1 781 201 69 0 chr17 7359723 7359897 -82144656 - MER20 DNA MER1_type 0 219 34 677 236 55 0 chr17 7360078 7360243 -82144310 + MER97c DNA MER1_type? 5 178 -912 225 0 0 0 chr17 7360668 7360693 -82143860 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 57 0 0 chr17 7360851 7360886 -82143667 + AT_rich Low_complexity Low_complexity 1 35 0 264 59 0 0 chr17 7361334 7361368 -82143185 + (CA)n Simple_repeat Simple_repeat 2 35 0 825 122 0 20 chr17 7361392 7361641 -82142912 + (TG)n Simple_repeat Simple_repeat 1 243 0 305 221 126 11 chr17 7361977 7362072 -82142481 - MIR SINE MIR -62 146 41 23 68 0 0 chr17 7363348 7363392 -82141161 + GC_rich Low_complexity Low_complexity 1 44 0 218 307 13 0 chr17 7364152 7364227 -82140326 - L2 LINE L2 -11 3261 3186 766 143 33 91 chr17 7364669 7364800 -82139753 - L1MA6 LINE L1 0 6300 6184 2409 97 0 6 chr17 7364800 7365111 -82139442 - AluSx SINE Alu -3 309 1 766 143 33 91 chr17 7365111 7365189 -82139364 - L1MA6 LINE L1 -116 6184 6103 4754 54 29 2 chr17 7365337 7365966 -82138587 - L1PA8 LINE L1 0 6172 5527 564 292 75 18 chr17 7366010 7366236 -82138317 + MIR SINE MIR 21 259 -3 621 78 0 49 chr17 7366327 7366429 -82138124 + AluY SINE Alu 208 304 -7 596 273 116 29 chr17 7366553 7366898 -82137655 + L1M4 LINE L1 4495 4869 -1277 1315 181 24 74 chr17 7366912 7367037 -82137516 + Charlie2a DNA MER1_type 1011 1141 -1721 2410 77 0 48 chr17 7367037 7367349 -82137204 - AluSg SINE Alu -13 297 1 1315 181 24 74 chr17 7367349 7367644 -82136909 + Charlie2a DNA MER1_type 1141 1410 -1452 1855 174 106 26 chr17 7367663 7368088 -82136465 + LTR2B LTR ERV1 32 490 0 249 200 67 13 chr17 7368418 7368493 -82136060 + L1MD3 LINE L1 7905 7983 -12 22 0 0 0 chr17 7368555 7368577 -82135976 + AT_rich Low_complexity Low_complexity 1 22 0 2266 110 10 0 chr17 7368577 7368887 -82135666 - AluSq SINE Alu 0 313 1 1058 149 199 10 chr17 7368938 7369139 -82135414 + AluJb SINE Alu 1 239 -73 358 328 64 17 chr17 7369604 7369816 -82134737 - MLT1H LTR MaLR -150 264 65 1086 250 37 10 chr17 7370003 7370299 -82134254 + Charlie2a DNA MER1_type 1475 1778 -1084 705 145 0 0 chr17 7370299 7370416 -82134137 + FRAM SINE Alu 52 168 -8 25 0 0 0 chr17 7370563 7370588 -82133965 + AT_rich Low_complexity Low_complexity 1 25 0 2276 99 0 0 chr17 7371147 7371439 -82133114 - AluSc SINE Alu -16 293 2 3347 241 102 35 chr17 7371627 7372388 -82132165 + L2 LINE L2 1631 2340 -973 2100 106 29 4 chr17 7372388 7372662 -82131891 + AluSx SINE Alu 1 281 -31 3347 241 102 35 chr17 7372662 7372986 -82131567 + L2 LINE L2 2340 2641 -672 2493 115 20 54 chr17 7372986 7373229 -82131324 - MSTA LTR MaLR 0 428 178 2271 117 0 7 chr17 7373229 7373537 -82131016 - AluSg SINE Alu -4 306 1 2493 115 20 54 chr17 7373537 7373549 -82131004 - MSTA LTR MaLR -250 178 167 2530 71 0 3 chr17 7373549 7373858 -82130695 - AluY SINE Alu -3 308 1 2493 115 20 54 chr17 7373858 7374044 -82130509 - MSTA LTR MaLR -261 167 1 3347 241 102 35 chr17 7374044 7374284 -82130269 + L2 LINE L2 2641 2864 -449 2372 94 3 3 chr17 7374284 7374582 -82129971 + AluSx SINE Alu 1 298 -14 6874 45 7 2 chr17 7374583 7375773 -82128780 + L1PA6 LINE L1 4960 6152 -2 3347 241 102 35 chr17 7375773 7376023 -82128530 + L2 LINE L2 2863 3312 -1 373 316 84 77 chr17 7375997 7376904 -82127649 - L2 LINE L2 -796 2518 1606 * 300 137 0 0 chr17 7377354 7377405 -82127148 + (TA)n Simple_repeat Simple_repeat 1 51 0 22 35 0 0 chr17 7377413 7377442 -82127111 + AT_rich Low_complexity Low_complexity 1 29 0 203 232 62 0 chr17 7377444 7377556 -82126997 + (TA)n Simple_repeat Simple_repeat 1 119 0 938 220 11 0 chr17 7377556 7377733 -82126820 - AluJo SINE Alu -17 295 117 861 113 7 7 chr17 7377764 7377906 -82126647 - L1MB8 LINE L1 -11 6167 6026 346 137 0 0 chr17 7377906 7377957 -82126596 + L1 LINE L1 17 67 -7498 17905 168 47 37 chr17 7378111 7380070 -82124483 + L1 LINE L1 16 1954 -5611 328 60 0 8 chr17 7380070 7380121 -82124432 + MER4E LTR ERV1 653 692 -74 17905 168 47 37 chr17 7380121 7382867 -82121686 + L1 LINE L1 1954 4821 -2744 5219 135 18 68 chr17 7382870 7383875 -82120678 - HERVH LTR ERV1 -3619 4094 3140 * 8686 162 37 40 chr17 7383854 7386405 -82118148 - HERVH LTR ERV1 -3622 2907 793 2840 129 9 24 chr17 7386459 7386925 -82117628 - HERVH LTR ERV1 -7254 459 1 1226 171 129 89 chr17 7386932 7387358 -82117195 - LTR7 LTR ERV1 -7 443 1 3012 211 8 3 chr17 7387358 7388016 -82116537 + L1 LINE L1 5755 6415 -1150 933 88 0 0 chr17 7388017 7388130 -82116423 + AluY SINE Alu 1 113 -198 1824 186 121 38 chr17 7388347 7388794 -82115759 - LTR2B LTR ERV1 0 490 7 3208 246 192 42 chr17 7388813 7390650 -82113903 - HAL1 LINE L1 -145 2362 252 1895 251 76 44 chr17 7390660 7390978 -82113575 + L2 LINE L2 2286 2592 -721 2016 73 4 0 chr17 7390978 7391238 -82113315 + L1PA8 LINE L1 5912 6172 0 1895 251 76 44 chr17 7391238 7391847 -82112706 + L2 LINE L2 2592 3254 -59 5731 137 9 17 chr17 7391849 7393195 -82111358 + L1MA3 LINE L1 4333 5668 -637 3749 204 53 4 chr17 7393198 7393894 -82110659 + L1PA12 LINE L1 1 730 -6851 * 5647 144 24 19 chr17 7393890 7394839 -82109714 + L1PA13 LINE L1 4379 5342 -821 2427 96 0 0 chr17 7394839 7395151 -82109402 - AluSx SINE Alu 0 312 1 5647 144 24 19 chr17 7395151 7395958 -82108595 + L1PA13 LINE L1 5342 6143 -20 4243 109 15 14 chr17 7395972 7396466 -82108087 + L1MA3 LINE L1 5652 6152 -153 2274 67 3 11 chr17 7396466 7396792 -82107761 + AluY SINE Alu 1 324 0 4243 109 15 14 chr17 7396792 7396947 -82107606 + L1MA3 LINE L1 6152 6305 0 1911 221 81 109 chr17 7396996 7397447 -82107106 + L1ME LINE L1 503 965 -5575 642 151 0 0 chr17 7397447 7397553 -82107000 + L1MA4 LINE L1 6180 6285 -15 1911 221 81 109 chr17 7397553 7397602 -82106951 + L1ME LINE L1 965 1014 -5526 2355 91 0 0 chr17 7397602 7397900 -82106653 - AluSg SINE Alu -12 298 1 1911 221 81 109 chr17 7397900 7398913 -82105640 + L1ME LINE L1 1014 1970 -4570 1988 152 3 0 chr17 7398913 7399232 -82105321 + AluSx SINE Alu 1 312 0 300 214 18 0 chr17 7399325 7399381 -82105172 + MER77 LTR ERV1 292 348 -257 555 238 26 16 chr17 7399420 7399609 -82104944 + L1ME LINE L1 2397 2587 -3953 297 0 0 0 chr17 7400348 7400381 -82104172 + (CA)n Simple_repeat Simple_repeat 2 34 0 600 284 26 0 chr17 7400991 7401146 -82103407 + MER63 DNA MER1_type 1 785 -277 2341 110 0 0 chr17 7401150 7401489 -82103064 + AluSg1 SINE Alu 1 339 0 1265 219 64 0 chr17 7401841 7402106 -82102447 + AluJo SINE Alu 1 282 -30 2373 80 7 3 chr17 7404089 7404391 -82100162 - AluY SINE Alu -8 303 1 2482 86 0 0 chr17 7404392 7404693 -82099860 - AluSg SINE Alu -9 301 1 200 326 184 0 chr17 7404884 7404982 -82099571 + MIR SINE MIR 15 130 -132 205 248 171 19 chr17 7405030 7405135 -82099418 + MIR SINE MIR 116 236 -26 2296 93 3 37 chr17 7406884 7407208 -82097345 - AluSq SINE Alu 0 313 1 32 43 0 0 chr17 7407509 7407555 -82096998 + AT_rich Low_complexity Low_complexity 1 46 0 575 209 25 61 chr17 7407580 7407776 -82096777 - L1ME1 LINE L1 -6 6160 5972 252 0 0 0 chr17 7409668 7409696 -82094857 + (TG)n Simple_repeat Simple_repeat 2 29 0 2486 76 0 0 chr17 7410106 7410407 -82094146 + AluSg SINE Alu 1 301 -9 2408 72 3 0 chr17 7410911 7411202 -82093351 + AluSp SINE Alu 1 292 -21 243 0 0 0 chr17 7411759 7411786 -82092767 + (CACAA)n Simple_repeat Simple_repeat 3 29 0 295 221 147 22 chr17 7413040 7413176 -82091377 + Charlie8 DNA MER1_type 95 247 -2170 2081 107 4 4 chr17 7413978 7414283 -82090270 + AluSg SINE Alu 1 305 0 803 214 77 72 chr17 7414384 7414785 -82089768 - L1MC5 LINE L1 -54 7907 7505 24 0 0 0 chr17 7414995 7415019 -82089534 + AT_rich Low_complexity Low_complexity 1 24 0 7378 31 0 0 chr17 7415032 7416395 -82088158 - L1PA4 LINE L1 0 6155 4769 268 274 21 0 chr17 7416859 7416954 -82087599 + MIR SINE MIR 47 143 -119 623 256 53 19 chr17 7417021 7417228 -82087325 - MIR SINE MIR 0 262 49 3735 45 0 0 chr17 7417430 7417877 -82086676 - L1PA8 LINE L1 -5 6167 5721 422 302 105 12 chr17 7418754 7418926 -82085627 + MIR3 SINE MIR 19 206 -2 460 252 24 155 chr17 7419659 7420040 -82084513 + L2 LINE L2 2904 3234 -38 15661 152 15 24 chr17 7422152 7425270 -82079283 + L1MA3 LINE L1 2950 6007 -1717 225 0 0 0 chr17 7425270 7425295 -82079258 + (TG)n Simple_repeat Simple_repeat 2 26 0 15661 152 15 24 chr17 7425295 7426822 -82077731 + L1MA3 LINE L1 6007 7547 -177 1797 220 74 16 chr17 7427395 7427744 -82076809 - L1MB5 LINE L1 0 6174 5794 2073 84 0 15 chr17 7427744 7428017 -82076536 - AluSx SINE Alu -8 304 36 1797 220 74 16 chr17 7428017 7428099 -82076454 - L1MB5 LINE L1 -380 5794 5718 492 213 4 12 chr17 7428099 7428212 -82076341 + MER5A DNA MER1_type 4 104 -74 203 176 0 0 chr17 7428264 7428298 -82076255 - MER5B DNA MER1_type -4 174 141 202 200 241 22 chr17 7428512 7428604 -82075949 + MIR SINE MIR 40 150 -112 500 247 9 92 chr17 7428624 7428851 -82075702 + L2 LINE L2 1422 1629 -1685 2356 243 171 47 chr17 7429089 7429552 -82075001 + L2 LINE L2 1699 2104 -1209 2388 92 0 0 chr17 7429552 7429857 -82074696 + AluY SINE Alu 1 305 -6 2356 243 171 47 chr17 7429857 7430731 -82073822 + L2 LINE L2 2104 3186 -127 1389 213 61 38 chr17 7430781 7431255 -82073298 - HAL1 LINE L1 -109 2398 1914 696 216 30 30 chr17 7431298 7431465 -82073088 - HAL1 LINE L1 -706 1801 1635 458 213 0 0 chr17 7431531 7431625 -82072928 + L1MA5 LINE L1 6207 6300 0 315 287 93 20 chr17 7431958 7432108 -82072445 - L1MC5 LINE L1 -152 7809 7649 267 31 0 0 chr17 7432154 7432186 -82072367 + (CTG)n Simple_repeat Simple_repeat 2 33 0 2164 135 3 3 chr17 7432531 7432843 -82071710 - AluSx SINE Alu 0 312 1 1503 247 74 108 chr17 7432883 7433702 -82070851 - L1MEd LINE L1 -744 1746 904 953 100 20 0 chr17 7433702 7433852 -82070701 + L1MA7 LINE L1 6135 6287 -4 1503 247 74 108 chr17 7433852 7434438 -82070115 - L1MEd LINE L1 -1586 904 300 1230 186 138 63 chr17 7434528 7434862 -82069691 - MLT1A1 LTR MaLR -6 359 1 314 248 71 9 chr17 7434893 7435006 -82069547 - L1MEd LINE L1 -5981 138 19 282 296 41 0 chr17 7435728 7435826 -82068727 - MIR3 SINE MIR -39 169 68 650 161 206 7 chr17 7436643 7436798 -82067755 + MER53 DNA DNA 1 186 -3 2309 99 3 3 chr17 7436892 7437196 -82067357 - AluSx SINE Alu -7 305 2 6600 176 19 16 chr17 7437727 7439009 -82065544 + L1P4 LINE L1 3870 5155 -991 1160 139 0 0 chr17 7439005 7439185 -82065368 + L1P4 LINE L1 5603 5782 -383 * 962 103 0 0 chr17 7439185 7439311 -82065242 + AluSq/x SINE Alu 1 126 -187 192 316 18 44 chr17 7439506 7439620 -82064933 + MIR SINE MIR 151 261 -1 202 217 0 0 chr17 7440064 7440110 -82064443 + MIR SINE MIR 28 73 -135 273 252 34 75 chr17 7440695 7440842 -82063711 + MIR SINE MIR 12 152 -110 266 283 11 11 chr17 7441862 7441954 -82062599 - MIR SINE MIR -50 212 121 366 184 41 51 chr17 7441962 7442060 -82062493 + MIR SINE MIR 38 134 -128 2298 103 3 22 chr17 7443164 7443483 -82061070 + AluSq SINE Alu 1 313 0 294 261 11 11 chr17 7444548 7444640 -82059913 - MIR SINE MIR -50 212 121 338 165 47 47 chr17 7444661 7444746 -82059807 + MIR SINE MIR 50 134 -128 325 297 125 1 chr17 7445071 7445282 -82059271 + MIR SINE MIR 16 250 -12 2069 115 44 0 chr17 7445394 7445689 -82058864 + AluSq SINE Alu 3 310 -3 774 196 0 19 chr17 7445709 7445778 -82058775 - AluJb SINE Alu 0 361 292 1030 93 6 27 chr17 7445778 7445961 -82058592 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 774 196 0 19 chr17 7445961 7446098 -82058455 - AluJb SINE Alu -69 292 158 221 308 0 0 chr17 7446207 7446272 -82058281 - L2 LINE L2 -207 3065 3001 221 353 111 0 chr17 7446472 7446716 -82057837 - L2 LINE L2 -665 2649 2379 2142 123 13 3 chr17 7446736 7447037 -82057516 + AluSx SINE Alu 1 304 -8 335 88 0 32 chr17 7447441 7447504 -82057049 - FAM SINE Alu -4 171 116 2892 39 0 0 chr17 7447524 7447880 -82056673 - L1P LINE L1 -803 5343 4988 952 27 0 0 chr17 7447880 7447985 -82056568 + L1PA5 LINE L1 6040 6149 -5 486 280 83 0 chr17 7449191 7449359 -82055194 + MIR SINE MIR 10 191 -71 303 274 103 17 chr17 7449483 7449600 -82054953 + MIR SINE MIR 19 145 -63 276 299 47 0 chr17 7449660 7449767 -82054786 - MIR SINE MIR -123 139 28 2037 136 4 0 chr17 7450206 7450486 -82054067 + AluSx SINE Alu 1 281 -31 5736 65 22 12 chr17 7450486 7451243 -82053310 + MER4E LTR ERV1 2 766 0 38177 48 0 1 chr17 7451714 7456327 -82048226 - L1P LINE L1 -1535 4611 2 32 26 0 0 chr17 7456483 7456522 -82048031 + AT_rich Low_complexity Low_complexity 1 39 0 359 309 0 0 chr17 7456619 7456703 -82047850 + Cheshire DNA MER1_type 1 84 -2336 6024 131 45 38 chr17 7456704 7456936 -82047617 - L1MC2 LINE L1 -12 6332 6103 2200 130 10 0 chr17 7456936 7457244 -82047309 - AluSx SINE Alu -1 311 1 6024 131 45 38 chr17 7457244 7458149 -82046404 - L1MC2 LINE L1 -241 6103 5188 1046 248 90 3 chr17 7458152 7458442 -82046111 + Cheshire DNA MER1_type 77 391 -2029 2329 81 0 26 chr17 7458446 7458755 -82045798 - AluSq SINE Alu -12 301 1 225 0 0 0 chr17 7458938 7458963 -82045590 + (CAT)n Simple_repeat Simple_repeat 2 26 0 252 0 0 0 chr17 7459020 7459048 -82045505 + (TG)n Simple_repeat Simple_repeat 1 28 0 606 280 92 5 chr17 7459055 7459262 -82045291 - MIR SINE MIR -30 232 8 313 220 0 0 chr17 7459529 7459588 -82044965 - MER63 DNA MER1_type -315 745 687 2085 137 49 22 chr17 7459674 7460039 -82044514 + THE1C LTR MaLR 1 375 0 477 254 35 7 chr17 7460948 7461090 -82043463 - MIR SINE MIR -39 223 78 362 160 80 0 chr17 7461090 7461190 -82043363 + L1MC4 LINE L1 6982 7089 -953 496 231 162 48 chr17 7461219 7461265 -82043288 + L1ME3A LINE L1 5841 5880 -290 369 0 0 0 chr17 7461265 7461306 -82043247 + (CA)n Simple_repeat Simple_repeat 2 42 0 496 231 162 48 chr17 7461306 7461488 -82043065 + L1ME3A LINE L1 5880 6095 -75 498 184 10 19 chr17 7461495 7461598 -82042955 + MLT1E LTR MaLR 10 111 -482 6036 52 0 3 chr17 7462965 7463697 -82040856 - L1PA6 LINE L1 -5 6149 5420 22 0 0 0 chr17 7463731 7463753 -82040800 + AT_rich Low_complexity Low_complexity 1 22 0 2264 94 3 0 chr17 7463828 7464114 -82040439 + AluSp SINE Alu 5 291 -22 188 139 0 23 chr17 7464129 7464172 -82040381 + (TAA)n Simple_repeat Simple_repeat 3 44 0 288 248 256 15 chr17 7464185 7464318 -82040235 - MIR SINE MIR -19 243 79 583 240 69 6 chr17 7464423 7464598 -82039955 + MIR SINE MIR 63 248 -14 239 371 68 37 chr17 7464781 7465075 -82039478 - L2 LINE L2 -385 2929 2627 1422 212 156 47 chr17 7465272 7465702 -82038851 + MLT1J LTR MaLR 28 504 -7 2314 77 0 3 chr17 7466433 7466718 -82037835 - AluY SINE Alu -27 284 1 563 204 110 55 chr17 7466737 7466992 -82037561 - HAL1 LINE L1 -182 2325 2057 24 0 0 0 chr17 7467101 7467125 -82037428 + AT_rich Low_complexity Low_complexity 1 24 0 2260 207 53 14 chr17 7467323 7467873 -82036680 - HAL1 LINE L1 -542 1965 1395 2069 154 30 14 chr17 7467915 7468284 -82036269 + THE1C LTR MaLR 1 375 0 3322 117 190 3 chr17 7468287 7468861 -82035692 + THE1C-int LTR MaLR 4 684 -896 1801 166 3 3 chr17 7468873 7469157 -82035396 - AluJo SINE Alu -18 294 11 1579 238 107 46 chr17 7469157 7469809 -82034744 - HAL1 LINE L1 -1226 1281 590 391 306 65 36 chr17 7469914 7470162 -82034391 - HAL1 LINE L1 -2139 368 114 266 333 67 0 chr17 7470245 7470335 -82034218 - HAL1 LINE L1 -2396 111 16 2545 75 0 0 chr17 7470546 7470852 -82033701 - AluY SINE Alu -5 306 1 389 341 64 47 chr17 7471506 7472022 -82032531 - L2 LINE L2 -898 2416 1892 193 305 98 12 chr17 7472123 7472205 -82032348 + L2 LINE L2 3141 3229 -43 2544 253 70 36 chr17 7472212 7473348 -82031205 - L1ME3A LINE L1 0 6170 5074 477 0 0 0 chr17 7473348 7473401 -82031152 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2544 253 70 36 chr17 7473401 7473430 -82031123 - L1ME3A LINE L1 -1096 5074 5047 2293 95 0 0 chr17 7473430 7473725 -82030828 - AluY SINE Alu -16 295 1 2544 253 70 36 chr17 7473725 7473988 -82030565 - L1ME3A LINE L1 -1123 5047 4794 2467 75 3 7 chr17 7473988 7474293 -82030260 - AluSq SINE Alu -9 304 1 2544 253 70 36 chr17 7474293 7474577 -82029976 - L1ME3A LINE L1 -1376 4794 4393 2219 123 0 0 chr17 7474671 7474972 -82029581 - AluY SINE Alu -8 303 3 1026 265 52 34 chr17 7475124 7475449 -82029104 + MER102b DNA MER1_type 11 341 0 2127 115 7 0 chr17 7475600 7475886 -82028667 + AluSx SINE Alu 1 288 -24 816 192 0 0 chr17 7476045 7476175 -82028378 + MER2 DNA MER2_type 6 135 -210 329 131 16 0 chr17 7476177 7476238 -82028315 + CT-rich Low_complexity Low_complexity 2 63 0 701 216 0 8 chr17 7476242 7476376 -82028177 - FLAM_A SINE Alu 0 133 1 603 83 0 0 chr17 7476378 7476462 -82028091 + MER2 DNA MER2_type 127 210 -135 2087 203 115 12 chr17 7477182 7477694 -82026859 - L1ME3A LINE L1 -8 6162 5598 285 182 0 0 chr17 7477729 7477784 -82026769 + GA-rich Low_complexity Low_complexity 3 57 0 208 299 169 40 chr17 7477942 7478267 -82026286 - L3 LINE CR1 -162 1415 1049 293 301 96 15 chr17 7478694 7478830 -82025723 + MIR3 SINE MIR 29 175 -33 288 311 60 11 chr17 7479036 7479219 -82025334 + HAL1 LINE L1 1158 1349 -1158 828 175 19 31 chr17 7479278 7479438 -82025115 + MER2 DNA MER2_type 16 173 -172 188 46 0 161 chr17 7479477 7479564 -82024989 + (CAATA)n Simple_repeat Simple_repeat 2 74 0 369 250 0 0 chr17 7479660 7479736 -82024817 + MER2 DNA MER2_type 269 344 -1 421 315 160 18 chr17 7479841 7480184 -82024369 + HAL1 LINE L1 1526 1917 -590 601 183 76 8 chr17 7480286 7480417 -82024136 + FRAM SINE Alu 11 150 -26 22 35 0 0 chr17 7480417 7480446 -82024107 + AT_rich Low_complexity Low_complexity 1 29 0 869 154 0 0 chr17 7480486 7480616 -82023937 + FLAM_C SINE Alu 1 130 -3 263 310 70 20 chr17 7480866 7480966 -82023587 - L2 LINE L2 0 3272 3168 982 223 45 67 chr17 7480971 7481400 -82023153 + L1MC4a LINE L1 5593 6016 -105 446 296 133 26 chr17 7482689 7482915 -82021638 - MIR SINE MIR -4 258 9 791 218 19 28 chr17 7483563 7483774 -82020779 + L1MC4a LINE L1 5673 5881 -1927 278 53 0 26 chr17 7483784 7483822 -82020731 - FRAM/FAM SINE Alu -99 67 31 250 271 181 45 chr17 7483863 7484084 -82020469 + L1MC4a LINE L1 5918 6168 -1640 27 0 0 0 chr17 7484090 7484117 -82020436 + AT_rich Low_complexity Low_complexity 1 27 0 1432 153 12 81 chr17 7484660 7484980 -82019573 - AluJo SINE Alu -14 298 1 448 242 67 17 chr17 7484980 7485100 -82019453 + MIR SINE MIR 77 202 -60 1509 117 36 97 chr17 7485100 7485320 -82019233 - THE1C LTR MaLR 0 375 178 2408 96 0 0 chr17 7485320 7485621 -82018932 + AluSx SINE Alu 1 301 -11 1509 117 36 97 chr17 7485621 7485708 -82018845 - THE1C LTR MaLR -197 178 87 22 0 0 0 chr17 7486034 7486056 -82018497 + AT_rich Low_complexity Low_complexity 1 22 0 782 232 16 20 chr17 7486155 7486401 -82018152 - L1ME LINE L1 -5054 1016 772 1680 180 7 7 chr17 7486714 7487003 -82017550 - AluJb SINE Alu -23 289 1 22 35 0 0 chr17 7487389 7487418 -82017135 + AT_rich Low_complexity Low_complexity 1 29 0 192 291 18 0 chr17 7487449 7487504 -82017049 + L2 LINE L2 3249 3304 -9 2328 90 3 0 chr17 7487896 7488206 -82016347 + AluY SINE Alu 1 311 0 1314 249 28 82 chr17 7489162 7489732 -82014821 - MER34 LTR ERV1 -3 539 1 22 0 0 0 chr17 7490018 7490040 -82014513 + AT_rich Low_complexity Low_complexity 1 22 0 620 268 41 36 chr17 7490600 7490794 -82013759 - MIR SINE MIR -48 214 20 189 263 0 0 chr17 7490801 7490839 -82013714 - MIR SINE MIR -129 79 42 411 274 29 0 chr17 7491226 7491328 -82013225 - MIR SINE MIR 0 262 158 959 274 74 79 chr17 7491502 7492327 -82012226 + HAL1 LINE L1 2 1019 -1488 7214 53 10 0 chr17 7492333 7493671 -82010882 - L1PA7 LINE L1 0 6154 4801 2034 77 50 0 chr17 7493671 7493932 -82010621 + AluY SINE Alu 21 294 -17 13249 103 4 28 chr17 7493932 7496390 -82008163 - L1P3 LINE L1 -4009 2452 7 2410 145 36 19 chr17 7496892 7497089 -82007464 + MSTA LTR MaLR 1 193 -235 2719 144 44 2 chr17 7497089 7497500 -82007053 - MSTA LTR MaLR 0 428 1 2410 145 36 19 chr17 7497500 7497723 -82006830 + MSTA LTR MaLR 193 428 0 558 295 131 52 chr17 7498845 7498960 -82005593 - HAL1 LINE L1 -1709 798 693 2179 78 27 10 chr17 7498960 7499256 -82005297 - AluY SINE Alu -10 301 1 558 295 131 52 chr17 7499256 7499638 -82004915 - HAL1 LINE L1 -1814 693 262 2003 176 40 62 chr17 7499734 7499814 -82004739 - MSTB LTR MaLR 0 426 346 2064 87 4 0 chr17 7499814 7500080 -82004473 + AluSc SINE Alu 35 301 -8 2003 176 40 62 chr17 7500080 7500419 -82004134 - MSTB LTR MaLR -80 346 16 24 0 0 0 chr17 7500434 7500458 -82004095 + AT_rich Low_complexity Low_complexity 1 24 0 838 275 48 34 chr17 7500469 7500883 -82003670 + L1PBa LINE L1 135 554 -6309 883 226 43 4 chr17 7500909 7501139 -82003414 + L1PBa LINE L1 612 850 -6013 265 214 18 0 chr17 7501368 7501424 -82003129 - MER89-int LTR ERV1 -2166 2481 2425 692 147 121 17 chr17 7501437 7501553 -82003000 - FLAM_C SINE Alu -14 129 2 481 211 0 90 chr17 7502045 7502178 -82002375 - MER89-int LTR ERV1 -4076 860 740 390 304 52 55 chr17 7502622 7502911 -82001642 - MER89-int LTR ERV1 -3156 3645 3358 4151 133 44 5 chr17 7503613 7504250 -82000303 - L1PA15 LINE L1 -22 6143 5482 668 280 92 5 chr17 7504644 7504851 -81999702 + MIR SINE MIR 8 232 -30 252 0 0 0 chr17 7504858 7504886 -81999667 + (CA)n Simple_repeat Simple_repeat 1 28 0 225 0 0 0 chr17 7504943 7504968 -81999585 + (ATG)n Simple_repeat Simple_repeat 2 26 0 2614 24 7 0 chr17 7505151 7505447 -81999106 + AluY SINE Alu 1 298 -13 1152 151 5 11 chr17 7505452 7505638 -81998915 - Tigger3(Golem) DNA MER2_type -284 2745 2561 759 115 10 0 chr17 7505639 7505743 -81998810 + AluSg SINE Alu 2 106 -204 16234 215 27 29 chr17 7505843 7509624 -81994929 - L1PA13 LINE L1 -826 5971 2185 942 109 0 51 chr17 7509624 7509761 -81994792 - FLAM_C SINE Alu -3 130 1 16234 215 27 29 chr17 7509761 7510057 -81994496 - L1PA13 LINE L1 -4612 2185 1890 1738 123 88 0 chr17 7510057 7510206 -81994347 - AluSg1 SINE Alu -24 285 151 360 0 0 0 chr17 7510206 7510246 -81994307 + (TG)n Simple_repeat Simple_repeat 2 41 0 1738 123 88 0 chr17 7510246 7510356 -81994197 - AluSg1 SINE Alu -158 151 3 16234 215 27 29 chr17 7510356 7511029 -81993524 - L1PA13 LINE L1 -4907 1890 1180 1023 297 58 52 chr17 7511008 7511530 -81993023 - L1PA13 LINE L1 -5818 969 445 * 796 203 0 7 chr17 7511527 7511680 -81992873 - L1PA13 LINE L1 -6632 155 4 * 1370 228 69 64 chr17 7511777 7512359 -81992194 + LTR24B LTR ERV1 1 635 0 1128 262 46 40 chr17 7512359 7512959 -81991594 + LTR24B-int LTR ERV1 2 745 -4378 180 179 0 0 chr17 7513268 7513307 -81991246 + CT-rich Low_complexity Low_complexity 5 43 0 332 330 11 34 chr17 7513973 7514149 -81990404 + MER89-int LTR ERV1 3480 3651 -3440 1786 144 17 10 chr17 7514237 7514535 -81990018 - AluJo SINE Alu -12 300 1 328 277 43 11 chr17 7514605 7514699 -81989854 + MER89-int LTR ERV1 2538 2634 -4167 2491 4 0 15 chr17 7514866 7515140 -81989413 + AluYb8 SINE Alu 20 289 -29 2054 96 0 31 chr17 7515383 7515674 -81988879 + AluSq SINE Alu 1 282 -31 180 0 0 0 chr17 7515675 7515695 -81988858 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 205 182 0 0 chr17 7516386 7516419 -81988134 + polypurine Low_complexity Low_complexity 1 33 0 474 118 0 0 chr17 7516842 7516910 -81987643 + LTR24B LTR ERV1 501 568 -8 2333 92 0 3 chr17 7517127 7517422 -81987131 - AluSc SINE Alu -15 294 1 3733 199 106 15 chr17 7517422 7518229 -81986324 - L1MC2 LINE L1 -13 6331 5428 1693 167 23 13 chr17 7518229 7518535 -81986018 - AluJb SINE Alu -3 309 1 3733 199 106 15 chr17 7518535 7518651 -81985902 - L1MC2 LINE L1 -916 5428 5324 2380 92 0 0 chr17 7518651 7518956 -81985597 - AluSx SINE Alu -7 305 1 1069 125 60 50 chr17 7518981 7519181 -81985372 - L1MB2 LINE L1 -2 6169 5968 840 172 27 59 chr17 7519181 7519367 -81985186 - LTR57 LTR ERVL 0 411 232 2374 71 0 7 chr17 7519411 7519706 -81984847 - AluY SINE Alu -18 293 1 1006 92 48 121 chr17 7519772 7519979 -81984574 - L1MA2 LINE L1 -18 6286 6095 2489 65 0 10 chr17 7519992 7520301 -81984252 - AluY SINE Alu -5 306 1 1409 129 37 0 chr17 7520301 7520518 -81984035 - LTR57 LTR ERVL -186 225 1 2423 106 0 0 chr17 7522101 7522413 -81982140 + AluSx SINE Alu 1 312 0 221 305 98 12 chr17 7522782 7522864 -81981689 + L2 LINE L2 3141 3229 -43 404 72 9 0 chr17 7522902 7522968 -81981585 - MER51A LTR ERV1 -308 69 1 249 278 130 17 chr17 7523000 7523115 -81981438 + L1M4 LINE L1 4902 5029 -1117 25 31 0 0 chr17 7523303 7523335 -81981218 + AT_rich Low_complexity Low_complexity 1 32 0 1513 108 33 21 chr17 7523532 7523879 -81980674 + LTR46 LTR ERV1 1 404 -56 354 23 0 0 chr17 7523883 7523926 -81980627 + (TC)n Simple_repeat Simple_repeat 2 44 0 2366 94 3 0 chr17 7523929 7524236 -81980317 - AluSp SINE Alu -5 308 1 564 82 0 0 chr17 7524245 7524317 -81980236 - MER4E LTR ERV1 -282 497 426 1914 148 26 58 chr17 7524317 7524695 -81979858 + MER66B LTR ERV1 1 366 -120 1630 112 13 0 chr17 7524701 7524925 -81979628 + AluSg/x SINE Alu 76 302 -8 1681 171 27 0 chr17 7524932 7525224 -81979329 + MER4D LTR ERV1 604 903 0 337 123 62 0 chr17 7525629 7525694 -81978859 + L1MC2 LINE L1 6267 6335 -9 8268 21 0 0 chr17 7526127 7527534 -81977019 + L1PA3 LINE L1 4752 6155 0 24 32 0 0 chr17 7527934 7527965 -81976588 + AT_rich Low_complexity Low_complexity 1 31 0 1336 189 80 121 chr17 7528605 7528677 -81975876 - MSTD LTR MaLR 0 396 323 2229 92 3 0 chr17 7528677 7528959 -81975594 + AluY SINE Alu 2 284 -27 1336 189 80 121 chr17 7528959 7529299 -81975254 - MSTD LTR MaLR -73 323 1 21 36 0 0 chr17 7529987 7530015 -81974538 + AT_rich Low_complexity Low_complexity 1 28 0 1509 159 90 34 chr17 7530164 7530594 -81973959 + LTR54 LTR ERV1 1 493 -5 229 177 106 99 chr17 7530700 7530841 -81973712 - L1ME4a LINE L1 -2 6119 5978 1175 276 43 57 chr17 7530993 7531486 -81973067 - LTR33A LTR ERVL 0 523 38 806 199 17 6 chr17 7531532 7531708 -81972845 + L1MC4 LINE L1 7438 7615 -427 595 138 0 47 chr17 7531717 7531963 -81972590 + AluJ SINE Alu 11 294 -18 1090 256 73 42 chr17 7531964 7532348 -81972205 + L1MC4 LINE L1 7620 8019 -23 2066 127 0 3 chr17 7532348 7532640 -81971913 - AluSg SINE Alu -17 293 3 1090 256 73 42 chr17 7532640 7532665 -81971888 + L1MC4 LINE L1 8019 8042 0 631 270 90 69 chr17 7532880 7533115 -81971438 + MLT1H LTR MaLR 1 230 -365 5794 45 1 1 chr17 7533115 7533781 -81970772 + L1PA7 LINE L1 5483 6148 -6 631 270 90 69 chr17 7533781 7534004 -81970549 + MLT1H LTR MaLR 230 447 -148 2446 42 19 13 chr17 7534004 7534313 -81970240 - AluY SINE Alu 0 311 1 631 270 90 69 chr17 7534313 7534356 -81970197 + MLT1H LTR MaLR 447 488 -107 2420 138 14 6 chr17 7534356 7534719 -81969834 + MER47A DNA MER2_type 1 366 0 631 270 90 69 chr17 7534719 7534736 -81969817 + MLT1H LTR MaLR 488 588 -7 1731 161 22 75 chr17 7534860 7535276 -81969277 - L1 LINE L1 -831 6734 6341 * 8231 195 38 118 chr17 7535267 7535471 -81969082 - L1 LINE L1 -1433 6132 5913 2585 192 16 43 chr17 7535471 7535728 -81968825 - MER70A LTR ERVL 0 472 233 1886 122 79 0 chr17 7535728 7536007 -81968546 - AluSg SINE Alu -9 301 1 2585 192 16 43 chr17 7536007 7536234 -81968319 - MER70A LTR ERVL -239 233 1 8231 195 38 118 chr17 7536234 7537702 -81966851 - L1 LINE L1 -1652 5913 4329 189 0 0 0 chr17 7537702 7537723 -81966830 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 8231 195 38 118 chr17 7537723 7538376 -81966177 - L1 LINE L1 -3236 4329 3625 2242 90 0 0 chr17 7538376 7538675 -81965878 + AluSg1 SINE Alu 1 299 -10 8231 195 38 118 chr17 7538675 7539663 -81964890 - L1 LINE L1 -3940 3625 2719 270 0 0 0 chr17 7539665 7539695 -81964858 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 7341 11 2 0 chr17 7539695 7540511 -81964042 - L1PA3 LINE L1 -10 6145 5328 496 213 25 0 chr17 7540484 7540606 -81963947 - L1M3c LINE L1 -4555 1586 1462 * 560 306 117 20 chr17 7540711 7540959 -81963594 - L1M3c LINE L1 -5546 595 324 1564 250 32 5 chr17 7541033 7541409 -81963144 - L1M3c LINE L1 -5755 386 1 212 404 14 28 chr17 7541409 7541627 -81962926 - L2 LINE L2 -249 3023 2809 300 297 50 30 chr17 7541883 7541984 -81962569 - L2 LINE L2 -4 3309 3207 487 212 63 112 chr17 7542007 7542248 -81962305 - L1MC5 LINE L1 -126 7916 7665 1824 115 7 7 chr17 7542248 7542527 -81962026 + AluSx SINE Alu 1 279 -33 279 54 0 0 chr17 7542527 7542564 -81961989 + (CAAT)n Simple_repeat Simple_repeat 3 39 0 487 212 63 112 chr17 7542564 7542660 -81961893 - L1MC5 LINE L1 -375 7667 7505 663 249 39 11 chr17 7542783 7542964 -81961589 - L1ME2 LINE L1 -158 6006 5821 1371 104 0 0 chr17 7542981 7543163 -81961390 + AluSg SINE Alu 1 182 -128 2074 97 3 23 chr17 7543171 7543480 -81961073 + AluSx SINE Alu 1 303 -9 277 83 21 0 chr17 7543480 7543528 -81961025 + L1PA16 LINE L1 6118 6166 0 1975 120 0 10 chr17 7543543 7543869 -81960684 + AluSx SINE Alu 5 312 0 370 345 117 19 chr17 7544449 7544655 -81959898 + L1ME LINE L1 598 823 -5573 382 234 301 13 chr17 7544684 7545059 -81959494 + L1ME LINE L1 776 1205 -5201 4133 243 52 37 chr17 7545080 7547407 -81957146 + L1PBa LINE L1 3 1644 -5219 1577 162 2 29 chr17 7547404 7547691 -81956862 + L1PB3 LINE L1 5889 6161 -5 * 1363 262 52 15 chr17 7547696 7548158 -81956395 + L1ME LINE L1 1217 1695 -4711 6094 78 29 19 chr17 7548158 7549062 -81955491 + L1PB1 LINE L1 5237 6148 -3 1376 194 9 34 chr17 7549072 7549422 -81955131 + L1ME LINE L1 1691 2031 -4375 180 0 0 0 chr17 7549659 7549679 -81954874 + (CA)n Simple_repeat Simple_repeat 2 21 0 187 380 105 37 chr17 7549803 7550127 -81954426 + L2 LINE L2 2872 3217 -55 487 231 46 0 chr17 7550154 7550262 -81954291 - L2 LINE L2 -2 3311 3199 183 304 0 0 chr17 7550272 7550318 -81954235 + L2 LINE L2 3219 3264 -8 356 255 114 135 chr17 7550850 7551183 -81953370 + L2 LINE L2 2943 3268 -4 1540 168 0 31 chr17 7551655 7551941 -81952612 + AluJo SINE Alu 6 282 -30 262 268 18 116 chr17 7551962 7552074 -81952479 - L2 LINE L2 -14 3258 3158 270 0 0 0 chr17 7552192 7552222 -81952331 + (TG)n Simple_repeat Simple_repeat 1 30 0 751 149 9 0 chr17 7552223 7552337 -81952216 - FLAM_C SINE Alu -28 115 1 2147 104 7 10 chr17 7553180 7553315 -81951238 + AluSx SINE Alu 1 135 -177 2249 95 0 7 chr17 7553315 7553621 -81950932 + AluSg SINE Alu 1 304 -6 2147 104 7 10 chr17 7553621 7553794 -81950759 + AluSx SINE Alu 135 308 -4 2214 76 0 3 chr17 7554450 7554741 -81949812 - AluY SINE Alu -21 290 1 336 67 0 0 chr17 7554822 7554867 -81949686 - MADE1 DNA Mariner -35 45 1 2769 219 73 54 chr17 7555610 7556291 -81948262 - HAL1 LINE L1 -604 1903 1196 2481 55 0 7 chr17 7556291 7556600 -81947953 - AluY SINE Alu -4 307 1 2769 219 73 54 chr17 7556600 7556914 -81947639 - HAL1 LINE L1 -1311 1196 889 2620 146 34 0 chr17 7557033 7557451 -81947102 + MSTB1 LTR MaLR 1 432 0 389 287 0 10 chr17 7557452 7557553 -81947000 + MIR SINE MIR 101 200 -62 1120 272 85 19 chr17 7557690 7558077 -81946476 + MLT1K LTR MaLR 108 588 0 851 295 16 28 chr17 7558173 7558536 -81946017 - L1ME LINE L1 -343 5778 5420 220 277 48 48 chr17 7558696 7558779 -81945774 + MIR SINE MIR 25 107 -101 379 248 48 0 chr17 7558960 7559085 -81945468 + L1ME1 LINE L1 6035 6165 -1 1382 76 0 0 chr17 7559091 7559263 -81945290 + AluY SINE Alu 1 172 -139 1729 192 124 28 chr17 7559366 7559628 -81944925 - L1MDa LINE L1 -4791 1749 1514 195 42 0 0 chr17 7559628 7559652 -81944901 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1729 192 124 28 chr17 7559652 7559890 -81944663 - L1MDa LINE L1 -5026 1514 1201 2049 136 0 7 chr17 7559891 7560200 -81944353 - AluSx SINE Alu -5 307 1 1912 240 27 27 chr17 7560219 7560665 -81943888 - L1MDa LINE L1 -6061 479 34 2424 169 62 102 chr17 7560666 7561489 -81943064 - L1ME1 LINE L1 -341 5825 5065 1963 88 0 4 chr17 7561489 7561750 -81942803 + AluSg SINE Alu 37 296 -14 2424 169 62 102 chr17 7561750 7562107 -81942446 - L1ME1 LINE L1 -1101 5065 4695 611 217 35 0 chr17 7562208 7562323 -81942230 - MER44D DNA MER2_type -220 389 1 407 225 75 116 chr17 7562331 7562470 -81942083 - HAL1 LINE L1 -2223 284 162 2291 89 3 3 chr17 7562470 7562783 -81941770 - AluSp SINE Alu 0 313 1 407 225 75 116 chr17 7562783 7562936 -81941617 - HAL1 LINE L1 -2345 162 4 329 278 95 65 chr17 7562910 7563178 -81941375 - L1MEd LINE L1 -4901 1235 945 * 2370 64 3 0 chr17 7563178 7563474 -81941079 - AluY SINE Alu -14 297 1 329 278 95 65 chr17 7563474 7563680 -81940873 - L1MEd LINE L1 -5191 945 747 26 30 0 0 chr17 7563826 7563859 -81940694 + AT_rich Low_complexity Low_complexity 1 33 0 461 104 0 0 chr17 7563860 7563927 -81940626 - L1PA10 LINE L1 -13 6155 6089 4451 91 15 7 chr17 7563927 7564540 -81940013 + L1PA10 LINE L1 5459 6076 -92 2256 73 7 3 chr17 7564541 7564844 -81939709 - AluY SINE Alu -7 304 1 993 197 126 74 chr17 7565077 7565426 -81939127 - MER66A LTR ERV1 -40 438 66 2129 113 7 0 chr17 7565426 7565736 -81938817 - AluSx SINE Alu 0 312 1 993 197 126 74 chr17 7565736 7565776 -81938777 - MER66A LTR ERV1 -412 66 29 25 0 0 0 chr17 7565854 7565879 -81938674 + AT_rich Low_complexity Low_complexity 1 25 0 1926 148 3 3 chr17 7565972 7566282 -81938271 - AluJo SINE Alu -2 310 1 276 232 0 29 chr17 7566529 7566598 -81937955 - MIR SINE MIR -8 254 188 1152 225 47 69 chr17 7566820 7567215 -81937338 + MLT1K LTR MaLR 165 586 -29 2027 123 3 7 chr17 7567245 7567554 -81936999 - AluSq SINE Alu 0 313 6 254 246 29 0 chr17 7567561 7567630 -81936923 + MLT1K LTR MaLR 514 584 -4 2295 77 3 22 chr17 7567814 7568125 -81936428 - AluSp SINE Alu -8 305 1 284 0 28 0 chr17 7568379 7568415 -81936138 + (TTA)n Simple_repeat Simple_repeat 3 39 0 2354 152 44 12 chr17 7568467 7568875 -81935678 - MSTB LTR MaLR -4 422 2 2258 89 0 0 chr17 7569035 7569326 -81935227 - AluSx SINE Alu -21 291 1 424 110 0 0 chr17 7569648 7569721 -81934832 - L1MC3 LINE L1 -1 7784 7712 1881 82 74 0 chr17 7570407 7570677 -81933876 - AluSx SINE Alu -22 290 1 800 278 133 44 chr17 7570679 7571121 -81933432 - HAL1 LINE L1 -1656 851 357 2131 110 0 3 chr17 7571121 7571429 -81933124 - AluSq SINE Alu -6 307 1 800 278 133 44 chr17 7571429 7571489 -81933064 - HAL1 LINE L1 -2150 357 304 331 165 44 77 chr17 7571501 7571592 -81932961 - Tigger7 DNA MER2_type 0 2491 2404 475 171 0 0 chr17 7571729 7571799 -81932754 - AluJ/FLAM SINE Alu -240 72 3 216 0 0 0 chr17 7571812 7571836 -81932717 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1736 98 0 0 chr17 7571836 7572072 -81932481 - AluSx SINE Alu -32 280 45 5352 103 31 16 chr17 7572076 7572472 -81932081 - Tigger1 DNA MER2_type -948 1470 1081 2151 114 0 0 chr17 7572472 7572771 -81931782 - AluSg SINE Alu -10 300 2 5352 103 31 16 chr17 7572771 7573187 -81931366 - Tigger1 DNA MER2_type -1337 1081 646 1269 108 15 0 chr17 7573187 7573382 -81931171 - AluSc SINE Alu -13 296 99 534 161 0 76 chr17 7573493 7573611 -81930942 + AluJo SINE Alu 112 220 -92 225 167 136 0 chr17 7573653 7573719 -81930834 + MIR SINE MIR 127 201 -61 267 31 0 0 chr17 7573743 7573775 -81930778 + (CA)n Simple_repeat Simple_repeat 1 32 0 601 212 8 0 chr17 7574212 7574353 -81930200 + FLAM_A SINE Alu 1 142 0 902 169 17 11 chr17 7574398 7574576 -81929977 - MER96B DNA MER1_type? -237 180 2 2193 117 0 0 chr17 7575053 7575362 -81929191 + AluSx SINE Alu 1 309 -3 373 359 57 31 chr17 7575426 7575744 -81928809 + L2 LINE L2 1217 1542 -1772 625 184 58 89 chr17 7575744 7575793 -81928760 - MER106A DNA MER1_type -3 233 184 2229 95 3 7 chr17 7575793 7576099 -81928454 - AluSp SINE Alu -8 305 1 625 184 58 89 chr17 7576099 7576239 -81928314 - MER106A DNA MER1_type -52 184 50 665 149 0 0 chr17 7576249 7576343 -81928210 + 5S rRNA rRNA 1 94 -27 1119 149 86 0 chr17 7576730 7576951 -81927602 - L1MA9 LINE L1 0 6312 6073 1200 206 26 90 chr17 7576951 7577020 -81927533 + MSTB2 LTR MaLR 7 79 -378 1870 142 7 3 chr17 7577020 7577322 -81927231 + AluJb SINE Alu 9 311 -1 1200 206 26 90 chr17 7577322 7577597 -81926956 + MSTB2 LTR MaLR 79 329 -128 2168 88 3 3 chr17 7577698 7577994 -81926559 - AluSq SINE Alu -17 296 1 1386 157 52 21 chr17 7578281 7578294 -81926259 - AluJb SINE Alu -17 295 284 459 63 0 0 chr17 7578294 7578357 -81926196 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1386 157 52 21 chr17 7578357 7578629 -81925924 - AluJb SINE Alu -28 284 1 288 345 54 20 chr17 7578951 7579176 -81925377 + L2 LINE L2 2745 2969 -303 1028 189 4 88 chr17 7579587 7579652 -81924901 + MIR SINE MIR 6 75 -187 3934 180 40 48 chr17 7579652 7580614 -81923939 - LTR13 LTR ERVK 0 954 1 1028 189 4 88 chr17 7580614 7580786 -81923767 + MIR SINE MIR 75 223 -39 1821 151 0 19 chr17 7580823 7581135 -81923418 - AluSx SINE Alu -6 306 1 880 125 21 0 chr17 7581431 7581575 -81922978 + AluSp/q SINE Alu 163 309 -4 1125 92 12 0 chr17 7581575 7581738 -81922815 + Tigger1 DNA MER2_type 1584 1748 -670 1764 101 0 0 chr17 7581738 7581975 -81922578 + AluSq SINE Alu 1 237 -76 1913 126 0 26 chr17 7582246 7582555 -81921998 + AluJb SINE Alu 1 301 -11 2155 104 0 7 chr17 7582592 7582890 -81921663 + AluSx SINE Alu 1 296 -16 249 224 13 40 chr17 7582892 7582968 -81921585 + MER67C LTR ERV1 28 101 -609 2156 140 25 6 chr17 7583068 7583082 -81921471 + MER67C LTR ERV1 347 359 -351 2252 104 0 0 chr17 7583082 7583379 -81921174 + AluSx SINE Alu 1 297 -15 2156 140 25 6 chr17 7583379 7583721 -81920832 + MER67C LTR ERV1 359 710 0 210 282 84 0 chr17 7583883 7583954 -81920599 - MIR SINE MIR -1 261 185 207 0 0 0 chr17 7584344 7584367 -81920186 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2377 69 0 10 chr17 7587133 7587437 -81917116 - AluY SINE Alu -10 301 1 203 208 19 38 chr17 7588192 7588245 -81916308 + C-rich Low_complexity Low_complexity 2 53 0 225 310 129 9 chr17 7589664 7589780 -81914773 + MIR3 SINE MIR 36 165 -43 981 216 16 0 chr17 7590277 7590462 -81914091 - MER5A DNA MER1_type 0 189 2 1948 152 0 13 chr17 7590526 7590828 -81913725 - AluSx SINE Alu -14 298 1 180 361 46 37 chr17 7591055 7591163 -81913390 + L2 LINE L2 3184 3292 -21 843 174 0 0 chr17 7592084 7592216 -81912337 + FLAM_C SINE Alu 2 133 0 1755 182 0 3 chr17 7593010 7593306 -81911247 - AluJo SINE Alu -17 295 1 449 334 87 63 chr17 7593613 7594107 -81910446 - L1M4 LINE L1 -2640 3506 3001 * 455 349 66 52 chr17 7593656 7594151 -81910402 + L1M4c LINE L1 903 1970 -4 380 326 60 22 chr17 7594481 7594665 -81909888 - MIR SINE MIR -44 218 28 2193 73 0 0 chr17 7595051 7595326 -81909227 - AluSg SINE Alu -4 306 32 21 0 0 0 chr17 7595633 7595654 -81908899 + GC_rich Low_complexity Low_complexity 1 21 0 1344 207 74 45 chr17 7597150 7597183 -81907370 - MLT1A1 LTR MaLR -2 363 332 2388 73 3 0 chr17 7597183 7597483 -81907070 + AluSg SINE Alu 1 301 -9 1344 207 74 45 chr17 7597483 7597802 -81906751 - MLT1A1 LTR MaLR -33 332 1 321 339 54 0 chr17 7597920 7598032 -81906521 + MIR SINE MIR 30 147 -61 743 299 132 16 chr17 7598034 7598073 -81906480 - L1MEd LINE L1 -1306 1184 1151 1935 109 8 0 chr17 7598073 7598338 -81906215 + AluSx SINE Alu 29 295 -17 743 299 132 16 chr17 7598338 7598626 -81905927 - L1MEd LINE L1 -1339 1151 827 1023 124 103 5 chr17 7598635 7598829 -81905724 - AluSg/x SINE Alu -15 297 85 455 89 0 0 chr17 7598948 7599004 -81905549 - AluJ/FLAM SINE Alu -247 65 10 2379 64 0 0 chr17 7599024 7599320 -81905233 - AluY SINE Alu -15 296 1 324 274 234 11 chr17 7599402 7599577 -81904976 - MIR SINE MIR 0 262 49 855 220 117 47 chr17 7600534 7600834 -81903719 - MER58B DNA MER1_type -2 339 19 1732 126 15 4 chr17 7601414 7601683 -81902870 - AluSx SINE Alu 0 312 41 1825 54 0 0 chr17 7602882 7603105 -81901448 + AluSg/x SINE Alu 77 299 -13 647 246 110 18 chr17 7603845 7604073 -81900480 + MIR SINE MIR 14 262 0 26 101 0 0 chr17 7604916 7605005 -81899548 + GC_rich Low_complexity Low_complexity 1 89 0 297 0 0 0 chr17 7614664 7614697 -81889856 + (CAG)n Simple_repeat Simple_repeat 1 33 0 760 212 53 6 chr17 7615250 7615420 -81889133 + MER5B DNA MER1_type 1 178 0 1192 173 0 20 chr17 7615518 7615720 -81888833 + AluJo SINE Alu 1 198 -114 237 289 56 22 chr17 7619865 7619955 -81884598 + MIR3 SINE MIR 106 198 -10 1765 183 112 23 chr17 7619955 7620250 -81884303 - MSTC LTR MaLR 0 428 88 2293 78 7 7 chr17 7620250 7620546 -81884007 - AluY SINE Alu -15 296 1 1765 183 112 23 chr17 7620546 7620643 -81883910 - MSTC LTR MaLR -340 88 1 5379 206 92 106 chr17 7620643 7620933 -81883620 - MSTC-int LTR MaLR 0 1735 1442 2257 82 7 0 chr17 7620933 7621227 -81883326 - AluSg SINE Alu -14 296 1 5379 206 92 106 chr17 7621227 7621828 -81882725 - MSTC-int LTR MaLR -293 1442 834 333 0 0 0 chr17 7621828 7621865 -81882688 + (CA)n Simple_repeat Simple_repeat 2 38 0 5379 206 92 106 chr17 7621865 7622504 -81882049 - MSTC-int LTR MaLR -901 834 230 2326 79 3 0 chr17 7622504 7622808 -81881745 - AluSg SINE Alu -5 305 1 5379 206 92 106 chr17 7622808 7623034 -81881519 - MSTC-int LTR MaLR -1505 230 2 856 155 83 26 chr17 7623044 7623237 -81881316 - MSTC LTR MaLR -4 424 221 265 140 0 53 chr17 7623383 7623440 -81881113 - MSTC LTR MaLR -250 178 125 586 152 120 32 chr17 7623440 7623598 -81880955 - MSTC LTR MaLR -256 172 1 2227 109 0 6 chr17 7623673 7623986 -81880567 + AluSq SINE Alu 1 311 -2 467 329 52 36 chr17 7624065 7624256 -81880297 - MIR SINE MIR -6 256 58 2142 95 0 0 chr17 7624256 7624570 -81879983 + AluSx SINE Alu 1 314 0 467 329 52 36 chr17 7624570 7624626 -81879927 - MIR SINE MIR -204 58 4 2471 43 27 0 chr17 7626821 7627122 -81877431 + AluSg SINE Alu 1 309 -1 2519 53 0 0 chr17 7627205 7627507 -81877046 + AluY SINE Alu 1 302 -9 277 241 196 38 chr17 7627524 7627657 -81876896 - MIR SINE MIR -93 169 16 * 455 319 80 5 chr17 7627638 7627826 -81876727 - MIR SINE MIR -38 224 23 347 294 39 10 chr17 7628690 7628792 -81875761 + MER91C DNA MER1_type 36 140 0 1327 39 0 0 chr17 7629084 7629239 -81875314 + AluY SINE Alu 147 301 -10 2087 80 0 104 chr17 7629921 7630259 -81874294 - AluSg SINE Alu -7 303 1 2342 97 0 0 chr17 7630666 7630976 -81873577 + AluSg SINE Alu 1 310 0 1996 92 14 11 chr17 7634123 7634449 -81870104 + AluSx SINE Alu 1 327 0 639 243 26 30 chr17 7634589 7634856 -81869697 - LTR13 LTR ERVK -741 266 1 777 157 6 81 chr17 7634856 7635028 -81869525 + MIR SINE MIR 65 223 -39 2053 140 0 9 chr17 7635062 7635377 -81869176 - AluSx SINE Alu 0 312 1 2359 81 3 0 chr17 7635684 7635991 -81868562 + AluSp SINE Alu 1 308 -5 814 296 42 61 chr17 7636024 7636524 -81868029 - L2 LINE L2 0 3272 2778 2366 70 0 0 chr17 7636711 7637051 -81867502 - AluY SINE Alu 0 311 1 185 158 0 53 chr17 7637359 7637397 -81867156 - L3 LINE CR1 -656 921 886 2370 86 3 0 chr17 7637617 7637908 -81866645 - AluSp SINE Alu -21 292 1 1412 122 0 0 chr17 7638416 7638605 -81865948 - AluSg/x SINE Alu -1 311 123 2368 84 0 0 chr17 7638846 7639157 -81865396 - AluSx SINE Alu 0 311 1 407 314 0 0 chr17 7639216 7639337 -81865216 - LTR67 LTR ERVL -8 549 429 226 266 0 16 chr17 7639505 7639569 -81864984 - LTR67 LTR ERVL -386 171 109 254 215 94 111 chr17 7639681 7639832 -81864721 - L1M4 LINE L1 -2976 3170 3024 1588 110 0 5 chr17 7639832 7640069 -81864484 + AluSq SINE Alu 78 313 0 254 215 94 111 chr17 7640069 7640214 -81864339 - L1M4 LINE L1 -3122 3024 2878 2304 95 0 3 chr17 7640621 7640915 -81863638 + AluSx SINE Alu 2 294 -18 242 280 53 27 chr17 7640983 7641058 -81863495 - MIR SINE MIR -137 125 49 494 122 52 17 chr17 7642346 7642518 -81862035 + (CA)n Simple_repeat Simple_repeat 2 179 0 295 279 132 25 chr17 7642679 7642876 -81861677 + L1MC5 LINE L1 7268 7485 -476 2170 119 24 3 chr17 7642882 7643177 -81861376 + AluJb SINE Alu 1 301 -11 264 204 28 36 chr17 7643193 7643317 -81861236 + L1M LINE L1 5222 5347 -810 2393 82 0 7 chr17 7643536 7643840 -81860713 - AluSx SINE Alu -10 302 1 562 231 22 22 chr17 7644208 7644390 -81860163 - LTR16C LTR ERVL 0 491 310 226 276 23 35 chr17 7644470 7644557 -81859996 - LTR16C LTR ERVL -310 181 96 375 285 81 63 chr17 7644731 7644817 -81859736 + L1M4 LINE L1 4387 4470 -1676 2489 43 26 10 chr17 7644817 7645121 -81859432 + AluY SINE Alu 1 309 -2 375 285 81 63 chr17 7645121 7645385 -81859168 + L1M4 LINE L1 4470 4749 -1397 4014 193 34 51 chr17 7645385 7646371 -81858182 - LTR5 LTR ERVK 0 969 1 375 285 81 63 chr17 7646371 7646461 -81858092 + L1M4 LINE L1 4749 4836 -1310 2494 83 3 3 chr17 7646560 7646873 -81857680 + AluSp SINE Alu 1 313 0 2996 115 0 58 chr17 7646873 7646986 -81857567 + L1PB3 LINE L1 5677 5795 -359 2326 117 3 0 chr17 7646986 7647293 -81857260 + AluSx SINE Alu 5 312 0 2996 115 0 58 chr17 7647293 7647683 -81856870 + L1PB3 LINE L1 5795 6151 -3 2570 63 0 0 chr17 7647911 7648211 -81856342 - AluSc SINE Alu -9 300 1 395 106 15 0 chr17 7648751 7648817 -81855736 + (TC)n Simple_repeat Simple_repeat 2 68 0 2392 87 7 0 chr17 7649180 7649479 -81855074 - AluY SINE Alu -10 301 1 2282 112 0 0 chr17 7649545 7649848 -81854705 - AluSg SINE Alu -7 303 1 657 101 0 0 chr17 7650460 7650549 -81854004 - AluSg/x SINE Alu -9 303 215 2764 89 11 3 chr17 7650550 7650911 -81853642 + THE1B LTR MaLR 1 364 0 2943 105 85 0 chr17 7650911 7651369 -81853184 + THE1B-int LTR MaLR 1 497 -1083 2265 98 16 3 chr17 7651369 7651676 -81852877 + AluSp SINE Alu 1 311 -2 751 176 0 37 chr17 7651942 7652078 -81852475 + FLAM_C SINE Alu 1 131 -2 485 294 65 33 chr17 7652079 7652355 -81852198 + HAL1b LINE L1 224 508 -840 581 155 23 39 chr17 7652376 7652505 -81852048 - L1MC2 LINE L1 -338 6006 5880 1305 118 0 0 chr17 7652509 7652687 -81851866 - AluSp SINE Alu 0 313 136 3586 145 7 16 chr17 7652688 7653142 -81851411 - L1MC2 LINE L1 -453 5891 5441 1376 177 66 22 chr17 7653142 7653450 -81851103 - AluJb SINE Alu 0 320 1 3586 145 7 16 chr17 7653450 7653701 -81850852 - L1MC2 LINE L1 -903 5441 5189 405 282 118 0 chr17 7653706 7653876 -81850677 + HAL1b LINE L1 546 735 -613 1584 179 34 0 chr17 7653879 7654141 -81850412 + AluJb SINE Alu 1 271 -41 2436 98 3 9 chr17 7654216 7654531 -81850022 + AluSp SINE Alu 1 313 0 320 166 18 11 chr17 7654562 7654650 -81849903 + Alu SINE Alu 1 52 -248 771 274 39 4 chr17 7654748 7654978 -81849575 - ERVL LTR ERVL -636 5128 4891 1922 95 88 0 chr17 7655025 7655298 -81849255 + AluSg SINE Alu 1 297 -13 945 240 132 39 chr17 7655313 7655751 -81848802 - ERVL LTR ERVL -966 4798 4320 2526 44 0 13 chr17 7655884 7656182 -81848371 - AluY SINE Alu -17 294 1 2226 95 0 3 chr17 7657025 7657310 -81847243 + AluSg SINE Alu 3 286 -24 2462 78 3 7 chr17 7657594 7657903 -81846650 + AluSx SINE Alu 1 308 -4 1779 80 124 0 chr17 7658373 7658648 -81845905 - MER4A LTR ERV1 -14 650 342 828 90 42 102 chr17 7658646 7658789 -81845764 - MER4A LTR ERV1 -507 157 24 * 1913 112 12 68 chr17 7658789 7659112 -81845441 - AluSx SINE Alu -7 305 1 828 90 42 102 chr17 7659112 7659135 -81845418 - MER4A LTR ERV1 -640 24 1 180 75 150 25 chr17 7659192 7659232 -81845321 - L3 LINE CR1 -463 1114 1070 858 132 0 23 chr17 7659610 7659768 -81844785 - AluJo SINE Alu 0 311 157 2200 173 2 84 chr17 7659789 7660264 -81844289 + MER41B LTR ERV1 132 567 -68 2556 62 0 7 chr17 7660264 7660573 -81843980 - AluSg SINE Alu -3 307 1 2351 89 0 3 chr17 7660573 7660865 -81843688 - AluSx SINE Alu -7 305 15 280 150 12 113 chr17 7660870 7660950 -81843603 + MER66A LTR ERV1 395 466 -12 1011 130 13 7 chr17 7660958 7661112 -81843441 - AluJo SINE Alu -146 166 12 3005 162 23 92 chr17 7661272 7661393 -81843160 - LTR8 LTR ERV1 0 691 563 2227 100 0 7 chr17 7661393 7661684 -81842869 - AluSc SINE Alu -20 289 1 1347 170 83 104 chr17 7661684 7662144 -81842409 + LTR7 LTR ERV1 1 450 0 3005 162 23 92 chr17 7662144 7662763 -81841790 - LTR8 LTR ERV1 -126 565 1 865 88 0 0 chr17 7663400 7663513 -81841040 - AluSg/x SINE Alu -5 305 193 2397 151 32 114 chr17 7663663 7664093 -81840460 + LTR9 LTR ERV1 1 361 -251 2301 75 4 0 chr17 7664093 7664402 -81840151 + AluSq SINE Alu 5 314 0 2397 151 32 114 chr17 7664402 7664625 -81839928 + LTR9 LTR ERV1 361 601 -11 1832 192 16 39 chr17 7664962 7665343 -81839210 + MLT1A2 LTR MaLR 3 374 0 2536 66 3 0 chr17 7665960 7666263 -81838290 - AluSg SINE Alu -6 304 1 306 314 85 8 chr17 7666321 7666439 -81838114 + MIR SINE MIR 130 256 -6 2166 112 3 3 chr17 7667506 7667800 -81836753 - AluSx SINE Alu -18 294 1 2447 67 0 3 chr17 7668435 7668735 -81835818 + AluY SINE Alu 1 299 -12 24 32 0 0 chr17 7668737 7668768 -81835785 + AT_rich Low_complexity Low_complexity 1 31 0 739 263 19 0 chr17 7668809 7668969 -81835584 + MIR SINE MIR 2 164 -98 1281 158 72 66 chr17 7668992 7669053 -81835500 + MLT1A1 LTR MaLR 1 60 -305 2525 73 0 7 chr17 7669053 7669355 -81835198 + AluSp SINE Alu 1 300 -13 1281 158 72 66 chr17 7669355 7669597 -81834956 + MLT1A1 LTR MaLR 60 306 -59 594 210 73 0 chr17 7669599 7669723 -81834830 - FLAM_C SINE Alu -10 133 1 341 191 15 0 chr17 7669724 7669792 -81834761 + MLT1A1 LTR MaLR 297 365 0 262 217 9 113 chr17 7669810 7669870 -81834683 + MIR SINE MIR 147 193 -69 2744 13 0 3 chr17 7669870 7670168 -81834385 - AluY SINE Alu -14 297 1 262 217 9 113 chr17 7670168 7670213 -81834340 + MIR SINE MIR 193 241 -21 2098 125 0 19 chr17 7670226 7670538 -81834015 - AluSg SINE Alu -4 306 1 762 179 0 15 chr17 7670538 7670672 -81833881 - AluJo SINE Alu -178 134 3 679 159 80 55 chr17 7670672 7670835 -81833718 - MLT1A1 LTR MaLR -207 167 1 * 785 309 93 15 chr17 7670835 7671242 -81833311 - MLT1L LTR MaLR -80 535 97 2265 92 10 3 chr17 7671356 7671659 -81832894 - AluSq SINE Alu -8 305 1 2008 78 4 0 chr17 7672589 7672834 -81831719 + AluY SINE Alu 1 246 -65 837 98 0 0 chr17 7672934 7673046 -81831507 - AluSg SINE Alu -198 112 1 4393 150 25 27 chr17 7673234 7674019 -81830534 + LTR1 LTR ERV1 1 784 -1 2151 85 6 63 chr17 7674073 7674404 -81830149 + AluSx SINE Alu 1 312 0 222 281 11 67 chr17 7674983 7675072 -81829481 + L2 LINE L2 2279 2362 -952 2459 96 3 0 chr17 7675103 7675415 -81829138 - AluSq SINE Alu 0 313 1 2232 80 0 40 chr17 7675603 7675905 -81828648 - AluSq SINE Alu -19 294 5 456 296 127 30 chr17 7675922 7676260 -81828293 + L2 LINE L2 2543 2913 -401 2543 91 0 0 chr17 7676967 7677276 -81827277 - AluSc SINE Alu 0 309 1 225 0 0 0 chr17 7677363 7677388 -81827165 + (A)n Simple_repeat Simple_repeat 1 25 0 637 293 35 20 chr17 7677388 7677586 -81826967 - MIR SINE MIR -38 224 24 422 273 115 34 chr17 7677753 7677962 -81826591 - L2 LINE L2 -5 3308 3083 2292 103 0 3 chr17 7678343 7678643 -81825910 - AluSx SINE Alu -13 299 1 5403 40 0 2 chr17 7679529 7680172 -81824381 - L1PA4 LINE L1 -3 6152 5511 8341 52 4 8 chr17 7680319 7681330 -81823223 - LTR13 LTR ERVK 0 1007 1 2319 93 7 0 chr17 7681565 7681856 -81822697 - AluSx SINE Alu -8 304 12 2090 48 0 24 chr17 7682008 7682258 -81822295 - AluY SINE Alu -17 294 51 553 41 0 41 chr17 7682258 7682331 -81822222 - AluY SINE Alu -164 147 78 655 165 10 0 chr17 7682543 7682646 -81821907 - AluJb SINE Alu -13 299 196 2099 108 11 7 chr17 7682650 7682937 -81821616 - AluSx SINE Alu -24 288 1 1720 176 78 22 chr17 7683457 7683983 -81820570 - MLT2A2 LTR ERVL 0 554 1 2208 111 3 0 chr17 7684477 7684775 -81819778 + AluSx SINE Alu 1 299 -13 282 263 5 88 chr17 7684930 7685135 -81819418 - HAL1 LINE L1 -310 2197 2010 256 216 189 0 chr17 7685340 7685414 -81819139 + LOR1b LTR ERV1 3 90 -371 2275 104 0 0 chr17 7685432 7685731 -81818822 - AluY SINE Alu -12 299 1 2376 94 3 0 chr17 7685863 7686161 -81818392 - AluSp SINE Alu -12 301 3 972 288 54 25 chr17 7686389 7686833 -81817720 - HAL1 LINE L1 -833 1674 1218 2494 83 0 3 chr17 7687254 7687566 -81816987 + AluSq SINE Alu 1 311 -2 527 295 90 18 chr17 7687810 7688173 -81816380 + L1M2 LINE L1 5262 5648 -643 588 111 0 0 chr17 7688175 7688265 -81816288 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 1054 149 12 6 chr17 7688273 7688441 -81816112 - FRAM SINE Alu -7 169 1 258 216 122 0 chr17 7688529 7688603 -81815950 + L1ME2 LINE L1 5729 5811 -1997 319 341 38 8 chr17 7688627 7688759 -81815794 + L1ME2 LINE L1 5811 5946 -218 1123 244 53 67 chr17 7688815 7689290 -81815263 - MLT1H LTR MaLR 0 549 82 2275 77 59 3 chr17 7689557 7689844 -81814709 + AluSq SINE Alu 1 303 -10 226 231 0 19 chr17 7690210 7690262 -81814291 - MER112 DNA MER1_type -6 254 204 307 247 148 0 chr17 7690342 7690423 -81814130 - L2 LINE L2 0 3313 3221 2478 78 7 0 chr17 7690828 7691137 -81813416 - AluSq SINE Alu -2 311 1 403 281 22 22 chr17 7691214 7691353 -81813200 + MIR SINE MIR 88 226 -36 207 171 0 0 chr17 7691668 7691703 -81812850 + GA-rich Low_complexity Low_complexity 2 36 0 241 120 53 13 chr17 7692396 7692471 -81812082 + (CCCCAG)n Simple_repeat Simple_repeat 6 83 0 438 159 40 23 chr17 7692899 7693075 -81811478 + (TG)n Simple_repeat Simple_repeat 2 180 0 663 116 56 0 chr17 7693094 7693432 -81811121 + (TG)n Simple_repeat Simple_repeat 1 357 0 1059 169 0 17 chr17 7693584 7693761 -81810792 - AluJo SINE Alu -55 257 84 238 343 40 0 chr17 7694084 7694183 -81810370 + L2 LINE L2 3146 3248 -24 425 246 217 11 chr17 7694448 7694623 -81809930 - L1MEc LINE L1 -5083 1313 1103 364 335 29 4 chr17 7694919 7695164 -81809389 - HAL1 LINE L1 -902 1605 1355 581 167 0 0 chr17 7695188 7695284 -81809269 + MSTB LTR MaLR 327 422 -4 4062 189 66 44 chr17 7695287 7696200 -81808353 - L1 LINE L1 -3752 3813 2921 1831 185 7 7 chr17 7696200 7696503 -81808050 + AluJb SINE Alu 2 304 -8 4062 189 66 44 chr17 7696503 7696659 -81807894 - L1 LINE L1 -4644 2921 2770 1622 138 120 22 chr17 7696659 7696934 -81807619 - AluSg SINE Alu -8 302 1 4062 189 66 44 chr17 7696934 7697242 -81807311 - L1 LINE L1 -4795 2770 2405 6538 222 16 7 chr17 7697268 7698596 -81805957 + L1PA13 LINE L1 1 1340 -5447 1595 219 20 122 chr17 7698597 7699195 -81805358 + L1ME1 LINE L1 5510 6046 -120 408 158 40 0 chr17 7699207 7699283 -81805270 + MLT1D LTR MaLR 28 106 -399 2218 102 7 3 chr17 7699292 7699595 -81804958 + AluSx SINE Alu 1 304 -8 1436 211 31 0 chr17 7699687 7699976 -81804577 + MLT2B3 LTR ERVL 210 507 -47 243 203 0 0 chr17 7699977 7700041 -81804512 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 255 118 0 0 chr17 7700046 7700093 -81804460 + MLT2B3 LTR ERVL 459 544 -10 481 284 109 40 chr17 7700274 7700590 -81803963 + L1MDa LINE L1 2365 2700 -3840 1947 88 0 16 chr17 7700627 7700877 -81803676 + AluSc SINE Alu 1 246 -63 481 123 32 52 chr17 7700978 7701133 -81803420 + C-rich Low_complexity Low_complexity 1 152 0 1528 151 14 76 chr17 7701146 7701437 -81803116 - AluJb SINE Alu -39 273 1 1466 205 57 40 chr17 7701437 7701494 -81803059 - L1MEc LINE L1 -5279 1117 1062 2548 71 0 0 chr17 7701494 7701804 -81802749 - AluY SINE Alu -1 310 1 1466 205 57 40 chr17 7701804 7702170 -81802383 - L1MEc LINE L1 -5334 1062 687 879 303 8 11 chr17 7702170 7702434 -81802119 - L1MEc LINE L1 -6054 342 80 625 287 28 17 chr17 7702491 7702672 -81801881 - MIR SINE MIR -50 212 30 194 104 0 62 chr17 7703308 7703356 -81801197 + (TG)n Simple_repeat Simple_repeat 1 45 0 183 189 0 0 chr17 7703466 7703519 -81801034 + (TG)n Simple_repeat Simple_repeat 2 54 0 345 179 26 26 chr17 7705360 7705477 -81799076 + (TG)n Simple_repeat Simple_repeat 1 117 0 416 131 51 23 chr17 7705536 7705711 -81798842 + (TG)n Simple_repeat Simple_repeat 1 180 0 187 91 61 45 chr17 7705701 7705767 -81798786 + (GTGTG)n Simple_repeat Simple_repeat 4 70 0 * 2310 88 0 3 chr17 7706275 7706572 -81797981 - AluY SINE Alu -15 296 1 325 215 0 0 chr17 7706716 7706781 -81797772 + MER116 DNA Mariner 16 80 0 391 320 59 40 chr17 7706790 7707012 -81797541 - L1M4 LINE L1 -3675 2471 2246 384 277 0 21 chr17 7707015 7707109 -81797444 - MER5B DNA MER1_type -1 177 86 407 42 0 0 chr17 7707110 7707158 -81797395 + AluY SINE Alu 2 49 -269 1464 171 0 13 chr17 7707258 7707497 -81797056 - AluSx SINE Alu -67 245 10 2358 95 0 3 chr17 7707910 7708205 -81796348 - AluSg SINE Alu -16 294 1 2248 118 3 0 chr17 7708226 7708530 -81796023 - AluSx SINE Alu -7 305 1 2377 99 3 0 chr17 7708530 7708831 -81795722 - AluSp SINE Alu -8 305 3 1317 19 0 0 chr17 7708964 7709118 -81795435 + L1PA4 LINE L1 6001 6154 -1 218 350 95 7 chr17 7710400 7710537 -81794016 + MIR SINE MIR 109 257 -5 2904 113 210 70 chr17 7711807 7712967 -81791586 + pTR5 LTR ERV1 743 2468 0 2258 106 0 0 chr17 7713249 7713541 -81791012 - AluSx SINE Alu -20 292 1 333 259 49 105 chr17 7713938 7714100 -81790453 + L1MC/D LINE L1 3808 3960 -2186 803 269 86 20 chr17 7714101 7714402 -81790151 - MLT1J LTR MaLR -148 363 43 2141 121 0 58 chr17 7714442 7714772 -81789781 - AluSx SINE Alu -1 311 1 1790 134 6 75 chr17 7714774 7715109 -81789444 - AluJb SINE Alu 0 312 1 832 215 49 0 chr17 7715109 7715272 -81789281 + MER58B DNA MER1_type 171 341 0 247 263 20 30 chr17 7715331 7715430 -81789123 + L1MC/D LINE L1 4101 4198 -1948 434 319 67 51 chr17 7715561 7715617 -81788936 + L1MC/D LINE L1 4557 4611 -1535 2151 124 3 0 chr17 7715617 7715908 -81788645 - AluSx SINE Alu -20 292 1 434 319 67 51 chr17 7715908 7716366 -81788187 + L1MC/D LINE L1 4611 5082 -1064 2273 112 3 0 chr17 7716366 7716671 -81787882 - AluSc SINE Alu -3 306 1 434 319 67 51 chr17 7716671 7716768 -81787785 + L1MC/D LINE L1 5082 5176 -970 608 211 181 20 chr17 7716768 7717189 -81787364 - LTR33 LTR ERVL 0 521 1 330 316 115 64 chr17 7717219 7717493 -81787060 + L1MC/D LINE L1 5306 5565 -2243 2384 88 0 0 chr17 7717493 7717787 -81786766 + AluSg SINE Alu 1 294 -16 330 316 115 64 chr17 7717787 7717798 -81786755 + L1MC/D LINE L1 5565 5574 -2234 2184 117 0 39 chr17 7717798 7718107 -81786446 + AluSq SINE Alu 1 297 -16 330 316 115 64 chr17 7718107 7718256 -81786297 + L1MC/D LINE L1 5574 5763 -2045 1306 133 20 5 chr17 7718298 7718494 -81786059 + AluSp SINE Alu 20 218 -95 227 287 0 52 chr17 7718833 7718969 -81785584 - L1MC/D LINE L1 -1923 5885 5757 1461 218 3 40 chr17 7719151 7719454 -81785099 + AluJo SINE Alu 1 292 -20 302 298 35 28 chr17 7719591 7719732 -81784821 - HAL1 LINE L1 -85 2422 2281 536 327 53 43 chr17 7719760 7720063 -81784490 - HAL1 LINE L1 -312 2195 1890 578 193 91 30 chr17 7720074 7720271 -81784282 - MER69 DNA AcHobo -10 2516 2308 320 214 0 0 chr17 7720281 7720337 -81784216 - L1MC4 LINE L1 -1339 6703 6648 1454 145 0 0 chr17 7720338 7720538 -81784015 - AluJo SINE Alu -13 299 100 447 134 0 0 chr17 7720589 7720656 -81783897 - AluJ/FLAM SINE Alu -224 88 22 327 248 138 18 chr17 7720664 7720773 -81783780 + MER50 LTR ERV1 10 131 -603 2114 93 0 4 chr17 7720774 7721044 -81783509 - AluSg1 SINE Alu -40 269 1 3334 170 7 38 chr17 7721045 7721621 -81782932 - L1MD2 LINE L1 -465 6288 5732 2196 89 7 0 chr17 7721621 7721924 -81782629 - AluSx SINE Alu 0 307 3 3334 170 7 38 chr17 7721924 7722073 -81782480 - L1MD2 LINE L1 -1021 5732 5580 2382 98 0 0 chr17 7722374 7722680 -81781873 - AluSx SINE Alu -6 306 1 286 301 44 0 chr17 7723459 7723596 -81780957 - LTR16A1 LTR ERVL -10 481 305 363 252 50 8 chr17 7723669 7723788 -81780765 - LTR16C LTR ERVL -164 327 204 2357 74 20 0 chr17 7723886 7724185 -81780368 + AluY SINE Alu 1 305 -6 3359 234 18 32 chr17 7724310 7724837 -81779716 - L1MD2 LINE L1 -2138 4402 3869 1583 133 20 119 chr17 7724837 7725182 -81779371 - AluJb SINE Alu -1 311 1 3359 234 18 32 chr17 7725182 7725211 -81779342 - L1MD2 LINE L1 -2671 3869 3841 2146 90 11 4 chr17 7725211 7725530 -81779023 - AluY SINE Alu 0 321 1 3359 234 18 32 chr17 7725530 7725706 -81778847 - L1MD2 LINE L1 -2699 3841 3664 4230 170 40 51 chr17 7725706 7726670 -81777883 + LTR13 LTR ERVK 1 954 0 3359 234 18 32 chr17 7726670 7726966 -81777587 - L1MD2 LINE L1 -2876 3664 3385 2000 124 60 0 chr17 7726966 7727248 -81777305 + AluSx SINE Alu 1 299 -13 1094 222 52 73 chr17 7727248 7727451 -81777102 - L1MD2 LINE L1 -5027 1516 1310 1835 163 0 40 chr17 7727451 7727776 -81776777 - AluJb SINE Alu 0 312 1 1094 222 52 73 chr17 7727776 7728014 -81776539 - L1MD2 LINE L1 -5233 1310 1083 1720 112 123 8 chr17 7728014 7728290 -81776263 - AluSg1 SINE Alu 0 305 1 1094 222 52 73 chr17 7728290 7728342 -81776211 - L1MD2 LINE L1 -5460 1083 1031 942 133 29 46 chr17 7728360 7728533 -81776020 - LTR5 LTR ERVK 0 969 800 2263 54 18 4 chr17 7728535 7728849 -81775704 - AluY SINE Alu 0 318 1 4486 159 32 37 chr17 7728849 7729661 -81774892 - LTR5 LTR ERVK -161 808 1 325 288 8 8 chr17 7729665 7729783 -81774770 - L1MD2 LINE L1 -5511 1032 915 208 233 0 0 chr17 7730250 7730267 -81774286 + A-rich Low_complexity Low_complexity 4 20 -26 2378 94 7 0 chr17 7730267 7730574 -81773979 + AluSc SINE Alu 1 309 0 208 233 0 0 chr17 7730574 7730599 -81773954 + A-rich Low_complexity Low_complexity 19 46 0 307 394 49 39 chr17 7730664 7730948 -81773605 - L1MD2 LINE L1 -6234 306 20 1250 258 92 32 chr17 7730949 7731150 -81773403 + L1M4 LINE L1 2748 2935 -3211 2485 65 0 10 chr17 7731150 7731459 -81773094 + AluY SINE Alu 1 306 -5 1250 258 92 32 chr17 7731459 7731745 -81772808 + L1M4 LINE L1 2935 3202 -2944 1969 157 7 10 chr17 7731745 7731879 -81772674 + AluSx SINE Alu 1 134 -178 2387 57 47 0 chr17 7731879 7732175 -81772378 + AluY SINE Alu 1 310 -1 1969 157 7 10 chr17 7732175 7732340 -81772213 + AluSx SINE Alu 134 299 -13 1250 258 92 32 chr17 7732340 7732379 -81772174 + L1M4 LINE L1 3202 3237 -2909 2532 60 3 19 chr17 7732379 7732694 -81771859 + AluY SINE Alu 1 310 -1 1250 258 92 32 chr17 7732694 7732945 -81771608 + L1M4 LINE L1 3237 3574 -2572 284 155 357 0 chr17 7732939 7733068 -81771485 + L1M4 LINE L1 4878 5052 -1094 * 1210 176 14 5 chr17 7733068 7733278 -81771275 + AluJo SINE Alu 1 212 -100 250 306 72 0 chr17 7733285 7733396 -81771157 - L1M4 LINE L1 -1898 4248 4130 1175 246 81 48 chr17 7733887 7734427 -81770126 + L2 LINE L2 2473 3069 -244 2816 109 23 32 chr17 7734427 7734605 -81769948 + MSTA LTR MaLR 1 179 -249 2493 72 7 0 chr17 7734605 7734909 -81769644 - AluY SINE Alu -5 306 1 2816 109 23 32 chr17 7734909 7735162 -81769391 + MSTA LTR MaLR 179 428 0 1175 246 81 48 chr17 7735162 7735416 -81769137 + L2 LINE L2 3069 3313 0 3859 48 13 0 chr17 7735434 7735908 -81768645 + L1PA8 LINE L1 5691 6170 -2 248 294 22 0 chr17 7735946 7736038 -81768515 + L1MC4a LINE L1 4498 4591 -1555 261 333 152 0 chr17 7736246 7736411 -81768142 + LTR16A LTR ERVL 261 450 0 2186 103 33 0 chr17 7736463 7736765 -81767788 + AluSx SINE Alu 1 312 0 310 298 90 75 chr17 7736765 7736953 -81767600 + L1MC4a LINE L1 5719 5909 -1899 783 176 0 0 chr17 7738163 7738305 -81766248 + AluSp/q SINE Alu 172 313 0 1749 142 14 17 chr17 7738409 7738698 -81765855 - AluSx SINE Alu -21 291 4 258 398 6 0 chr17 7738708 7738869 -81765684 + (CCCCAA)n Simple_repeat Simple_repeat 2 163 0 223 369 23 17 chr17 7738948 7739124 -81765429 + (CCCCAA)n Simple_repeat Simple_repeat 1 177 0 221 209 76 51 chr17 7740700 7740858 -81763695 + (ATGGTG)n Simple_repeat Simple_repeat 3 164 0 567 311 47 0 chr17 7740861 7741073 -81763480 + MIR SINE MIR 12 233 -29 2232 83 6 10 chr17 7741493 7741805 -81762748 + AluSq SINE Alu 1 311 -2 524 231 125 25 chr17 7742416 7742576 -81761977 - MER5B DNA MER1_type -1 177 2 313 263 56 44 chr17 7743240 7743261 -81761292 - L1MA10 LINE L1 -2 6332 6312 647 243 30 82 chr17 7743261 7743528 -81761025 - L1ME2 LINE L1 -13 6151 5899 1360 227 101 55 chr17 7743799 7744324 -81760229 - MLT1H LTR MaLR 0 549 1 2169 90 3 3 chr17 7744352 7744652 -81759901 - AluSp SINE Alu -13 300 1 862 213 14 36 chr17 7744765 7744986 -81759567 - L2 LINE L2 -793 2521 2306 1757 161 11 0 chr17 7745131 7745410 -81759143 - AluJo SINE Alu -30 282 1 504 255 76 0 chr17 7745411 7745556 -81758997 - LTR33 LTR ERVL -40 481 326 272 324 11 45 chr17 7745948 7746124 -81758429 + (CCCCAG)n Simple_repeat Simple_repeat 4 173 0 244 370 6 6 chr17 7746184 7746346 -81758207 + (CCCCAA)n Simple_repeat Simple_repeat 4 165 0 1095 52 8 0 chr17 7746497 7746631 -81757922 + AluSq/x SINE Alu 1 135 -178 2217 101 3 3 chr17 7746632 7746940 -81757613 + AluSc SINE Alu 1 308 -1 807 248 140 12 chr17 7747074 7747409 -81757144 - MER115 DNA AcHobo -313 380 3 906 47 0 58 chr17 7747428 7747599 -81756954 + (TTTC)n Simple_repeat Simple_repeat 2 162 0 1994 95 29 0 chr17 7747601 7747874 -81756679 - AluSp SINE Alu -32 281 1 2368 146 57 5 chr17 7748752 7749157 -81755396 + MSTA LTR MaLR 1 426 -2 10087 164 20 4 chr17 7749160 7750779 -81753774 + MSTA-int LTR MaLR 7 1651 0 2405 125 62 34 chr17 7750779 7750966 -81753587 + MSTA LTR MaLR 1 181 -247 1951 138 0 3 chr17 7750966 7751262 -81753291 - AluSg SINE Alu -15 295 1 2405 125 62 34 chr17 7751262 7751490 -81753063 + MSTA LTR MaLR 181 428 0 532 337 25 10 chr17 7751627 7751826 -81752727 + MIR SINE MIR 32 233 -29 320 73 0 0 chr17 7753102 7753143 -81751410 + L1MA9 LINE L1 5910 5950 -362 2247 97 0 0 chr17 7753143 7753441 -81751112 + AluSg SINE Alu 1 298 -12 1037 72 0 0 chr17 7755225 7755363 -81749190 - AluSp/q SINE Alu -5 308 171 2051 108 0 7 chr17 7755365 7755661 -81748892 - AluSx SINE Alu -18 294 1 1125 169 23 27 chr17 7755745 7755964 -81748589 - AluJo SINE Alu -11 301 84 2321 67 7 0 chr17 7756271 7756570 -81747983 + AluSx SINE Alu 1 301 -11 930 159 62 40 chr17 7756660 7756836 -81747717 + MLT1C LTR MaLR 38 217 -250 1815 105 6 125 chr17 7756837 7757180 -81747373 + AluSx SINE Alu 1 302 0 2052 78 0 7 chr17 7758027 7758297 -81746256 - AluSc SINE Alu -41 268 1 425 252 130 61 chr17 7758467 7758729 -81745824 + MLT1J2 LTR MaLR 164 443 -7 316 317 56 21 chr17 7758908 7759050 -81745503 - L2 LINE L2 -1252 2062 1916 260 250 37 81 chr17 7759468 7759533 -81745020 - L1M LINE L1 -790 5390 5333 2089 107 0 20 chr17 7759533 7759832 -81744721 - AluSc SINE Alu -16 293 1 260 250 37 81 chr17 7759832 7759902 -81744651 - L1M LINE L1 -847 5333 5261 300 223 122 47 chr17 7759902 7760050 -81744503 - L1MEc LINE L1 -4807 1589 1431 237 347 42 21 chr17 7760747 7760842 -81743711 + MER91C DNA MER1_type 31 127 -13 2162 121 0 13 chr17 7761230 7761544 -81743009 + AluSq SINE Alu 2 311 -2 2202 100 3 0 chr17 7761663 7761963 -81742590 - AluSx SINE Alu -11 301 1 2022 43 90 14 chr17 7762087 7762365 -81742188 - AluY SINE Alu -12 299 1 294 256 44 80 chr17 7763035 7763114 -81741439 + MIR SINE MIR 103 176 -86 2055 109 3 3 chr17 7763114 7763407 -81741146 - AluSq SINE Alu -18 295 3 294 256 44 80 chr17 7763407 7763464 -81741089 + MIR SINE MIR 176 234 -28 1484 290 100 19 chr17 7766341 7767092 -81737461 + L2 LINE L2 1562 2373 -941 189 195 0 0 chr17 7767365 7767406 -81737147 + (TG)n Simple_repeat Simple_repeat 2 42 0 1075 147 26 103 chr17 7768446 7768678 -81735875 + MER20 DNA MER1_type 6 219 0 2100 91 7 17 chr17 7771384 7771680 -81732873 - AluSx SINE Alu -16 296 4 240 191 0 21 chr17 7772390 7772437 -81732116 + MLT1K LTR MaLR 509 554 -34 580 243 53 32 chr17 7773572 7773761 -81730792 - LTR33 LTR ERVL -2 519 327 14689 138 29 63 chr17 7773850 7774831 -81729722 + L1MA3 LINE L1 2181 3194 -4530 1566 56 0 95 chr17 7774831 7775062 -81729491 - AluSc SINE Alu -100 209 1 14689 138 29 63 chr17 7775062 7777788 -81726765 + L1MA3 LINE L1 3194 6011 -1713 19161 35 9 0 chr17 7777788 7780905 -81723648 + L1PA4 LINE L1 3046 6151 -4 14689 138 29 63 chr17 7780905 7781288 -81723265 + L1MA3 LINE L1 6011 6406 -1318 444 19 0 0 chr17 7781288 7781341 -81723212 + (CA)n Simple_repeat Simple_repeat 2 54 0 14689 138 29 63 chr17 7781341 7782751 -81721802 + L1MA3 LINE L1 6406 7478 -246 3681 114 6 4 chr17 7782751 7783261 -81721292 + MER9 LTR ERVK 1 511 0 32807 58 19 18 chr17 7783261 7784018 -81720535 + HERVK9 LTR ERVK 1 755 -5161 187 233 0 83 chr17 7784018 7784078 -81720475 + MER5B DNA MER1_type 55 109 -69 32807 58 19 18 chr17 7784078 7787421 -81717132 + HERVK9 LTR ERVK 755 4166 -1750 6561 70 21 1 chr17 7787417 7788243 -81716310 + HERVK9 LTR ERVK 4793 5634 -282 * 2342 105 17 12 chr17 7788268 7788620 -81715933 + HERVK9 LTR ERVK 4936 5916 0 3845 93 0 10 chr17 7788620 7789136 -81715417 + MER9 LTR ERVK 1 511 0 1538 88 20 36 chr17 7789136 7789386 -81715167 + L1MA2 LINE L1 6057 6302 -2 550 329 44 16 chr17 7789582 7789831 -81714722 + MIR SINE MIR 7 262 0 402 57 0 0 chr17 7790003 7790056 -81714497 + (T)n Simple_repeat Simple_repeat 1 53 0 895 148 216 26 chr17 7790296 7790689 -81713864 + MER51A LTR ERV1 1 633 -1 1144 155 186 26 chr17 7790690 7790954 -81713599 + MER51A-int LTR ERV1 1 306 -7510 1245 288 59 70 chr17 7791683 7792701 -81711852 + MER51A-int LTR ERV1 4799 5805 -1951 2628 44 0 0 chr17 7792754 7793052 -81711501 - AluY SINE Alu -13 298 1 2081 99 4 4 chr17 7793052 7793324 -81711229 - AluSp SINE Alu -19 294 23 334 303 47 38 chr17 7793530 7793741 -81710812 + MER51A-int LTR ERV1 4654 4866 -1810 225 0 0 0 chr17 7793812 7793837 -81710716 + (T)n Simple_repeat Simple_repeat 1 25 0 1700 186 58 0 chr17 7793909 7794221 -81710332 + MER51A-int LTR ERV1 7487 7816 0 750 128 195 46 chr17 7794223 7794418 -81710135 + MER51A LTR ERV1 1 224 -410 * 1105 128 78 25 chr17 7794415 7794619 -81709934 + MER51A LTR ERV1 420 634 0 338 224 56 37 chr17 7794620 7794727 -81709826 - L1M4 LINE L1 -1276 4870 4762 493 290 52 8 chr17 7794743 7794995 -81709558 - L1ME LINE L1 -3322 2758 2496 506 262 48 62 chr17 7794996 7795332 -81709221 - L1ME LINE L1 -5703 367 37 1283 118 0 42 chr17 7795553 7795606 -81708947 + L1PA15 LINE L1 5448 5502 -663 2429 53 0 7 chr17 7795606 7795922 -81708631 + AluY SINE Alu 1 314 0 1283 118 0 42 chr17 7795922 7796079 -81708474 + L1PA15 LINE L1 5502 5650 -515 2435 109 6 3 chr17 7796089 7796436 -81708117 - THE1B LTR MaLR -16 348 1 3601 116 4 0 chr17 7796436 7796952 -81707601 + L1PA15 LINE L1 5646 6163 -2 4020 146 56 53 chr17 7797168 7797461 -81707092 - L1MB5 LINE L1 0 6174 5883 207 0 0 0 chr17 7797461 7797484 -81707069 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2249 99 0 0 chr17 7797484 7797766 -81706787 - AluSg SINE Alu -28 282 1 4020 146 56 53 chr17 7797766 7798359 -81706194 - L1MB5 LINE L1 -290 5884 5284 1047 65 0 7 chr17 7798656 7798794 -81705759 + L1PA7 LINE L1 6011 6147 -7 1917 166 0 23 chr17 7798798 7798970 -81705583 - AluJo SINE Alu -7 305 142 2218 60 4 4 chr17 7798970 7799235 -81705318 - AluY SINE Alu -5 306 42 1917 166 0 23 chr17 7799235 7799370 -81705183 - AluJo SINE Alu -170 142 5 5269 155 31 21 chr17 7800341 7802132 -81702421 - L1MA4 LINE L1 -11 6289 4464 283 193 0 0 chr17 7802574 7802631 -81701922 - MLT1K LTR MaLR -8 580 524 4457 170 9 37 chr17 7803905 7804645 -81699908 - L1 LINE L1 -782 5364 4658 2133 138 0 3 chr17 7804645 7804950 -81699603 - AluSx SINE Alu -8 304 1 4457 170 9 37 chr17 7804950 7805203 -81699350 - L1 LINE L1 -1488 4658 4399 1540 173 68 0 chr17 7805190 7805526 -81699027 - L1 LINE L1 -1983 4163 3805 * 4689 155 16 39 chr17 7805525 7806012 -81698541 + L1MA7 LINE L1 5341 5797 -494 2395 106 0 0 chr17 7806012 7806323 -81698230 + AluSx SINE Alu 1 311 -1 4689 155 16 39 chr17 7806323 7806807 -81697746 + L1MA7 LINE L1 5797 6290 -1 1067 184 15 25 chr17 7806965 7807161 -81697392 + AluSx SINE Alu 4 197 -115 6893 62 27 25 chr17 7807185 7808079 -81696474 + MER11D LTR ERVK 1 896 -1 1490 122 5 5 chr17 7808079 7808311 -81696242 + AluSg/x SINE Alu 80 311 0 1168 161 0 0 chr17 7808311 7808479 -81696074 + AluSg/x SINE Alu 135 302 -10 899 266 67 46 chr17 7808515 7808605 -81695948 - L1 LINE L1 -3382 2764 2677 681 224 0 8 chr17 7808605 7808730 -81695823 + FLAM_A SINE Alu 2 125 -8 899 266 67 46 chr17 7808730 7809058 -81695495 - L1 LINE L1 -3469 2677 2326 2318 99 0 16 chr17 7809058 7809371 -81695182 + AluSg1 SINE Alu 1 308 -1 899 266 67 46 chr17 7809371 7809564 -81694989 - L1 LINE L1 -3820 2326 2139 559 113 0 0 chr17 7809954 7810034 -81694519 + AluSg/x SINE Alu 217 296 -13 838 136 0 0 chr17 7811172 7811290 -81693263 - AluJo SINE Alu -108 204 87 1027 119 85 0 chr17 7811291 7811468 -81693085 - MER46B DNA MER2_type -169 67 1 1684 154 73 20 chr17 7811683 7811784 -81692769 - L1MB3 LINE L1 -7 6176 6082 2462 68 0 13 chr17 7811784 7812093 -81692460 - AluSc SINE Alu -4 305 1 1684 154 73 20 chr17 7812093 7812335 -81692218 - L1MB3 LINE L1 -101 6082 5815 640 128 11 0 chr17 7812337 7812431 -81692122 - AluJo/FRAM SINE Alu -25 287 193 2169 81 0 28 chr17 7812433 7812716 -81691837 - AluSq SINE Alu -38 275 1 698 188 0 7 chr17 7812720 7812858 -81691695 - L1PB4 LINE L1 0 6156 6020 357 213 22 4 chr17 7813087 7813322 -81691231 + (CA)n Simple_repeat Simple_repeat 1 239 0 452 261 6 6 chr17 7813333 7813513 -81691040 + (CA)n Simple_repeat Simple_repeat 1 180 0 275 227 8 0 chr17 7813559 7813687 -81690866 + (CA)n Simple_repeat Simple_repeat 1 129 0 334 237 0 48 chr17 7813700 7813833 -81690720 + (CTCA)n Simple_repeat Simple_repeat 4 127 -53 219 103 0 0 chr17 7813833 7813872 -81690681 + (CA)n Simple_repeat Simple_repeat 1 39 0 334 237 0 48 chr17 7813872 7813924 -81690629 + (CTCA)n Simple_repeat Simple_repeat 127 180 0 * 393 273 12 0 chr17 7813915 7814295 -81690258 + (CA)n Simple_repeat Simple_repeat 1 384 0 339 208 0 0 chr17 7814316 7814441 -81690112 + (CA)n Simple_repeat Simple_repeat 1 125 0 284 0 28 0 chr17 7814560 7814596 -81689957 + (CCCCAG)n Simple_repeat Simple_repeat 1 37 0 265 233 17 0 chr17 7816189 7816249 -81688304 + (CTGGGG)n Simple_repeat Simple_repeat 5 65 0 2173 112 7 3 chr17 7816348 7816653 -81687900 - AluSx SINE Alu -2 310 5 444 289 16 0 chr17 7817594 7817715 -81686838 - MIR SINE MIR -118 144 22 2358 89 3 0 chr17 7817894 7818214 -81686339 + AluSx SINE Alu 1 321 0 2502 94 0 0 chr17 7818219 7818528 -81686025 + AluSq SINE Alu 1 309 -4 2309 94 3 0 chr17 7818852 7819149 -81685404 + AluSq SINE Alu 1 298 -15 478 313 16 16 chr17 7819149 7819341 -81685212 + L1ME3A LINE L1 5974 6165 -5 677 198 0 9 chr17 7819443 7819589 -81684964 - FLAM_A SINE Alu 0 145 1 1498 130 153 11 chr17 7819802 7820063 -81684490 + AluJo SINE Alu 1 298 -4 2291 97 0 13 chr17 7820094 7820394 -81684159 + AluSg1 SINE Alu 1 296 -13 2420 71 0 34 chr17 7820484 7820806 -81683747 + AluY SINE Alu 1 311 0 1867 159 0 3 chr17 7820812 7821095 -81683458 + AluSx SINE Alu 1 282 -30 1080 54 0 0 chr17 7821098 7821264 -81683289 + AluSc SINE Alu 152 317 0 2145 107 3 7 chr17 7821936 7822234 -81682319 + AluSx SINE Alu 1 297 -15 405 0 0 0 chr17 7822237 7822282 -81682271 + (TA)n Simple_repeat Simple_repeat 2 46 0 340 308 75 15 chr17 7822503 7822636 -81681917 + MIR SINE MIR 116 256 -6 2223 84 0 24 chr17 7823477 7823773 -81680780 - AluSg SINE Alu -21 289 1 565 256 98 6 chr17 7823881 7824045 -81680508 - MIR SINE MIR 0 262 84 416 295 230 37 chr17 7824220 7824624 -81679929 + L2 LINE L2 2827 3308 -5 2175 79 3 28 chr17 7824893 7825218 -81679335 + AluSq SINE Alu 1 318 0 2289 113 0 3 chr17 7825426 7825726 -81678827 + AluSq SINE Alu 1 299 -14 292 276 31 10 chr17 7825736 7825834 -81678719 - MER5B DNA MER1_type 0 178 79 2238 111 3 0 chr17 7826466 7826764 -81677789 + AluSq SINE Alu 1 299 -14 2345 98 3 0 chr17 7826846 7827153 -81677400 + AluSg SINE Alu 1 308 -2 241 209 0 0 chr17 7828510 7828553 -81676000 + MER91A DNA MER1_type 119 161 -35 1244 81 6 0 chr17 7828599 7828760 -81675793 - AluSq SINE Alu -4 309 148 250 62 0 0 chr17 7828760 7828792 -81675761 - Alu SINE Alu -266 37 6 388 241 11 59 chr17 7830007 7830194 -81674359 + GA-rich Low_complexity Low_complexity 2 179 0 290 256 0 80 chr17 7830384 7830560 -81673993 + GA-rich Low_complexity Low_complexity 5 166 0 2242 83 40 7 chr17 7832385 7832686 -81671867 + AluY SINE Alu 1 311 0 320 280 16 74 chr17 7833063 7833252 -81671301 - L2 LINE L2 -881 2433 2256 438 211 22 160 chr17 7834992 7835126 -81669427 - L1MC5 LINE L1 -428 7533 7467 2079 105 40 17 chr17 7835126 7835422 -81669131 - AluSx SINE Alu -9 303 1 438 211 22 160 chr17 7835422 7835605 -81668948 - L1MC5 LINE L1 -494 7467 7260 242 248 168 30 chr17 7835738 7835839 -81668714 - L1MC5 LINE L1 -741 7220 7106 2244 120 3 0 chr17 7835839 7836139 -81668414 + AluSx SINE Alu 1 301 -11 1288 126 12 89 chr17 7836144 7836206 -81668347 + AluSg/x SINE Alu 83 148 -162 2376 87 0 3 chr17 7836206 7836504 -81668049 + AluSg1 SINE Alu 1 297 -12 1288 126 12 89 chr17 7836504 7836688 -81667865 + AluSg/x SINE Alu 148 310 0 632 186 113 105 chr17 7836708 7836829 -81667724 - L1MC5 LINE L1 -869 7092 6973 2346 107 0 3 chr17 7836829 7837139 -81667414 - AluSq SINE Alu -4 309 1 632 186 113 105 chr17 7837139 7837335 -81667218 - L1MC5 LINE L1 -988 6973 6769 2607 58 0 6 chr17 7837335 7837648 -81666905 + AluY SINE Alu 1 311 0 632 186 113 105 chr17 7837648 7837711 -81666842 - L1MC5 LINE L1 -1192 6769 6708 693 334 62 39 chr17 7837776 7838181 -81666372 - L1M4 LINE L1 -1437 4709 4315 2459 81 3 10 chr17 7838181 7838488 -81666065 - AluSp SINE Alu -8 305 1 2298 99 0 13 chr17 7838490 7838804 -81665749 - AluSx SINE Alu -2 310 1 693 334 62 39 chr17 7838804 7838968 -81665585 - L1M4 LINE L1 -1831 4315 4156 786 234 88 19 chr17 7838968 7839173 -81665380 + MER20 DNA MER1_type 1 219 0 693 334 62 39 chr17 7839173 7839239 -81665314 - L1M4 LINE L1 -1990 4156 4093 2382 103 0 0 chr17 7839239 7839551 -81665002 + AluSq SINE Alu 1 312 -1 693 334 62 39 chr17 7839551 7839743 -81664810 - L1M4 LINE L1 -2053 4093 3907 1469 149 65 19 chr17 7839743 7840004 -81664549 - AluJo SINE Alu -39 273 1 693 334 62 39 chr17 7840004 7840328 -81664225 - L1M4 LINE L1 -2239 3907 3522 210 258 0 0 chr17 7842050 7842112 -81662441 + (CA)n Simple_repeat Simple_repeat 1 62 0 289 256 0 58 chr17 7843337 7843493 -81661060 + C-rich Low_complexity Low_complexity 4 150 0 1020 141 39 0 chr17 7843677 7843833 -81660720 - FRAM SINE Alu -16 160 1 253 352 6 22 chr17 7844654 7844833 -81659720 + GA-rich Low_complexity Low_complexity 2 177 0 207 0 0 0 chr17 7844932 7844955 -81659598 + (CAGC)n Simple_repeat Simple_repeat 2 24 0 482 186 0 28 chr17 7845267 7845412 -81659141 + (CA)n Simple_repeat Simple_repeat 2 142 0 1753 134 7 22 chr17 7847091 7847366 -81657187 + AluJb SINE Alu 25 295 -17 1729 113 32 0 chr17 7847395 7847642 -81656911 + AluSx SINE Alu 46 300 -12 262 214 0 57 chr17 7849283 7849419 -81655134 + G-rich Low_complexity Low_complexity 1 128 0 492 165 0 0 chr17 7850245 7850324 -81654229 + FLAM SINE Alu 50 128 -15 2092 105 0 0 chr17 7850328 7850613 -81653940 + AluSg SINE Alu 1 285 -25 21 0 0 0 chr17 7850613 7850634 -81653919 + AT_rich Low_complexity Low_complexity 1 21 0 2228 99 0 6 chr17 7850656 7850969 -81653584 - AluSx SINE Alu 0 312 2 249 288 0 0 chr17 7852427 7852486 -81652067 + L2 LINE L2 3252 3310 -3 189 187 40 13 chr17 7854842 7854917 -81649636 + G-rich Low_complexity Low_complexity 2 78 0 209 192 0 19 chr17 7855177 7855229 -81649324 + GA-rich Low_complexity Low_complexity 3 53 0 224 398 16 8 chr17 7855946 7856069 -81648484 + L3 LINE CR1 1448 1571 -6 21 36 0 0 chr17 7857734 7857762 -81646791 + GC_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr17 7862175 7862197 -81642356 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 569 222 74 37 chr17 7864381 7864570 -81639983 - MER91A DNA MER1_type 0 196 1 371 261 96 0 chr17 7865776 7865891 -81638662 + L1ME3 LINE L1 5837 5962 -208 303 235 0 121 chr17 7865925 7866091 -81638462 + L1ME3 LINE L1 5940 6085 -77 2054 118 0 3 chr17 7866153 7866450 -81638103 - AluSx SINE Alu -16 296 1 2071 92 64 0 chr17 7868750 7869032 -81635521 + AluSq SINE Alu 1 300 -13 2196 116 10 0 chr17 7869146 7869448 -81635105 + AluSx SINE Alu 1 305 -7 252 346 48 0 chr17 7870139 7870243 -81634310 - MIR SINE MIR -107 155 47 2446 55 7 3 chr17 7870373 7870683 -81633870 + AluY SINE Alu 1 311 0 2158 60 0 18 chr17 7871028 7871313 -81633240 - AluY SINE Alu -13 298 19 24 0 0 0 chr17 7872002 7872026 -81632527 + GC_rich Low_complexity Low_complexity 1 24 0 243 146 0 0 chr17 7873728 7873769 -81630784 + (TTC)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr17 7875479 7875500 -81629053 + GC_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr17 7875565 7875602 -81628951 + GC_rich Low_complexity Low_complexity 1 37 0 236 326 11 33 chr17 7875859 7876040 -81628513 + C-rich Low_complexity Low_complexity 2 178 0 25 31 0 0 chr17 7877045 7877077 -81627476 + GC_rich Low_complexity Low_complexity 1 32 0 294 98 33 16 chr17 7877082 7877143 -81627410 + CT-rich Low_complexity Low_complexity 1 62 0 2003 125 7 10 chr17 7882455 7882590 -81621963 + AluJo SINE Alu 1 135 -177 2217 108 0 3 chr17 7882590 7882895 -81621658 + AluSg SINE Alu 1 304 -6 2003 125 7 10 chr17 7882895 7883062 -81621491 + AluJo SINE Alu 135 302 -10 2311 87 0 3 chr17 7883067 7883377 -81621176 - AluSg SINE Alu -1 309 1 21 36 0 0 chr17 7883377 7883405 -81621148 + AT_rich Low_complexity Low_complexity 1 28 0 256 297 103 32 chr17 7884980 7885037 -81619516 - MIR SINE MIR 0 262 210 2195 112 0 0 chr17 7885037 7885340 -81619213 - AluSg SINE Alu -1 309 7 256 297 103 32 chr17 7885340 7885437 -81619116 - MIR SINE MIR -52 210 97 328 267 100 0 chr17 7885439 7885559 -81618994 + L2 LINE L2 3174 3305 -8 2395 81 0 0 chr17 7885560 7885867 -81618686 + AluSc SINE Alu 1 307 -2 2274 98 3 3 chr17 7885930 7886236 -81618317 - AluSg SINE Alu -4 306 1 2009 104 35 3 chr17 7887215 7887504 -81617049 + AluSx SINE Alu 1 298 -14 40 67 0 0 chr17 7888884 7888959 -81615594 + GC_rich Low_complexity Low_complexity 1 75 0 296 277 0 50 chr17 7889183 7889284 -81615269 + G-rich Low_complexity Low_complexity 3 98 0 196 321 0 0 chr17 7890647 7890703 -81613850 + L2 LINE L2 3258 3313 0 182 167 0 24 chr17 7890796 7890838 -81613715 - L2 LINE L2 -665 2649 2609 294 331 60 23 chr17 7890849 7890982 -81613571 - L2 LINE L2 -1 3312 3175 2381 64 7 3 chr17 7891293 7891591 -81612962 + AluSp SINE Alu 1 299 -14 352 296 301 10 chr17 7891826 7892022 -81612531 - MIR SINE MIR -2 260 8 224 241 0 0 chr17 7892490 7892544 -81612009 + T-rich Low_complexity Low_complexity 1 54 0 307 330 106 28 chr17 7892605 7892784 -81611769 - L2 LINE L2 0 3313 3121 2355 54 3 10 chr17 7892823 7893119 -81611434 + AluY SINE Alu 1 294 -17 2116 91 24 3 chr17 7893361 7893648 -81610905 + AluSx SINE Alu 3 295 -17 1975 117 24 0 chr17 7893652 7893943 -81610610 + AluSg1 SINE Alu 3 300 -9 867 138 0 0 chr17 7894727 7894850 -81609703 - AluJb SINE Alu -189 123 1 229 336 64 0 chr17 7894884 7894994 -81609559 - MIR SINE MIR -38 224 108 1568 193 10 20 chr17 7895011 7895316 -81609237 - AluJb SINE Alu -10 302 1 2070 123 0 0 chr17 7895369 7895653 -81608900 + AluSg SINE Alu 3 286 -24 437 87 0 0 chr17 7895662 7895731 -81608822 + MER41A LTR ERV1 399 467 -87 2245 114 0 0 chr17 7895746 7896044 -81608509 + AluSx SINE Alu 1 298 -14 24 32 0 0 chr17 7897486 7897517 -81607036 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr17 7899030 7899062 -81605491 + GC_rich Low_complexity Low_complexity 1 32 0 28 79 0 0 chr17 7900094 7900157 -81604396 + GC_rich Low_complexity Low_complexity 1 63 0 1667 164 13 10 chr17 7901182 7901486 -81603067 - AluJb SINE Alu -7 305 1 2234 102 0 10 chr17 7901867 7902170 -81602383 - AluSq SINE Alu -13 300 1 738 204 21 14 chr17 7902239 7902381 -81602172 - FRAM SINE Alu -25 151 9 2199 93 0 3 chr17 7902391 7902680 -81601873 - AluSx SINE Alu -16 296 9 2484 55 0 10 chr17 7902698 7903010 -81601543 - AluY SINE Alu 0 311 3 1836 114 8 4 chr17 7903010 7903264 -81601289 - AluSx SINE Alu -57 255 1 189 0 0 0 chr17 7903270 7903291 -81601262 + (T)n Simple_repeat Simple_repeat 1 21 0 2313 96 0 6 chr17 7903305 7903617 -81600936 - AluSg SINE Alu 0 310 1 715 136 9 0 chr17 7903635 7903745 -81600808 - HY1 scRNA scRNA 0 112 2 265 267 222 11 chr17 7903802 7903982 -81600571 + L2 LINE L2 2531 2748 -566 2082 43 43 43 chr17 7903983 7904298 -81600255 + AluY SINE Alu 1 315 0 532 250 89 72 chr17 7904352 7904712 -81599841 + L2 LINE L2 2869 3234 -79 2198 130 0 9 chr17 7904786 7905101 -81599452 - AluSx SINE Alu 0 312 1 347 273 176 91 chr17 7905102 7905143 -81599410 - L2 LINE L2 -10 3303 3267 1061 164 6 0 chr17 7905143 7905302 -81599251 + FRAM SINE Alu 1 160 -6 2135 109 0 3 chr17 7905308 7905601 -81598952 + AluSg SINE Alu 1 292 -18 2038 88 26 39 chr17 7905609 7905917 -81598636 + AluSg SINE Alu 1 304 -6 2335 94 0 0 chr17 7905917 7906216 -81598337 + AluSq SINE Alu 1 299 -14 347 273 176 91 chr17 7906216 7906443 -81598110 - L2 LINE L2 -56 3257 2982 2165 114 0 13 chr17 7906443 7906750 -81597803 + AluSq SINE Alu 1 303 -10 347 273 176 91 chr17 7906750 7906804 -81597749 - L2 LINE L2 -331 2982 2934 688 180 78 106 chr17 7906857 7907074 -81597479 - MER20 DNA MER1_type 0 219 9 2131 115 10 0 chr17 7907154 7907450 -81597103 + AluSp SINE Alu 1 299 -14 362 286 97 39 chr17 7907459 7907674 -81596879 - L2 LINE L2 -2167 1147 946 1805 148 0 43 chr17 7907674 7907979 -81596574 + AluJb SINE Alu 3 294 -18 2060 75 45 24 chr17 7907979 7908292 -81596261 + AluY SINE Alu 1 311 0 362 286 97 39 chr17 7908292 7908334 -81596219 - L2 LINE L2 -2367 947 874 799 168 29 92 chr17 7908374 7908547 -81596006 + AluSq SINE Alu 1 162 -151 511 66 0 0 chr17 7908549 7908625 -81595928 + Alu SINE Alu 225 300 0 855 164 0 0 chr17 7908636 7908770 -81595783 + AluSg/x SINE Alu 161 294 -18 1979 132 24 0 chr17 7908775 7909064 -81595489 + AluSx SINE Alu 2 297 -15 954 321 106 27 chr17 7909066 7909393 -81595160 - L2 LINE L2 -2474 840 540 2293 91 0 0 chr17 7909393 7909691 -81594862 + AluSg SINE Alu 1 298 -12 2177 76 10 16 chr17 7909691 7909995 -81594558 + AluY SINE Alu 1 302 -9 954 321 106 27 chr17 7909995 7910268 -81594285 - L2 LINE L2 -2773 541 191 284 316 20 7 chr17 7910602 7910754 -81593799 + L1M4 LINE L1 3605 3758 -2388 2107 123 0 16 chr17 7910754 7910891 -81593662 + AluSx SINE Alu 1 139 -173 2176 67 0 0 chr17 7910891 7911161 -81593392 + AluY SINE Alu 37 306 -5 2107 123 0 16 chr17 7911161 7911333 -81593220 + AluSx SINE Alu 139 305 -7 262 316 0 60 chr17 7911333 7911379 -81593174 + L1M4 LINE L1 3844 3891 -2255 2178 116 0 0 chr17 7911379 7911681 -81592872 + AluY SINE Alu 1 302 -9 2438 75 3 0 chr17 7911685 7911991 -81592562 + AluSp SINE Alu 1 307 -6 262 316 0 60 chr17 7911991 7912107 -81592446 + L1M4 LINE L1 3894 4001 -2145 309 264 27 78 chr17 7912137 7912269 -81592284 + L1M4 LINE L1 4075 4212 -1934 2143 118 3 0 chr17 7912269 7912575 -81591978 + AluSg SINE Alu 2 308 -2 309 264 27 78 chr17 7912575 7912628 -81591925 + L1M4 LINE L1 4212 4246 -1900 2114 112 10 0 chr17 7912628 7912933 -81591620 + AluSp SINE Alu 2 309 -4 309 264 27 78 chr17 7912933 7913004 -81591549 + L1M4 LINE L1 4246 4319 -1827 315 122 0 0 chr17 7913067 7913116 -81591437 + (A)n Simple_repeat Simple_repeat 1 49 0 1833 170 23 3 chr17 7913116 7913422 -81591131 + AluJb SINE Alu 1 312 0 1082 331 66 64 chr17 7913429 7913455 -81591098 + L1M4 LINE L1 4345 4369 -1777 1942 127 0 3 chr17 7913455 7913760 -81590793 + AluSg SINE Alu 1 304 0 1082 331 66 64 chr17 7913760 7913989 -81590564 + L1M4 LINE L1 4369 4596 -1550 2082 121 0 3 chr17 7913989 7914287 -81590266 + AluSq SINE Alu 1 297 -16 1082 331 66 64 chr17 7914287 7914438 -81590115 + L1M4 LINE L1 4596 4745 -1401 2221 108 3 6 chr17 7914438 7914752 -81589801 + AluSq SINE Alu 1 313 0 1082 331 66 64 chr17 7914752 7915160 -81589393 + L1M4 LINE L1 4745 5167 -979 2022 138 0 0 chr17 7915160 7915457 -81589096 + AluSx SINE Alu 1 297 -15 1082 331 66 64 chr17 7915457 7915543 -81589010 + L1M4 LINE L1 5167 5251 -895 2287 104 3 0 chr17 7915550 7915858 -81588695 - AluSp SINE Alu -4 309 1 2163 89 0 0 chr17 7915869 7916175 -81588378 - AluY SINE Alu 0 306 1 2148 113 7 0 chr17 7916267 7916569 -81587984 + AluSx SINE Alu 1 304 -8 730 225 33 0 chr17 7916665 7916816 -81587737 + AluJb SINE Alu 140 295 -17 2163 110 3 7 chr17 7916818 7917127 -81587426 + AluSp SINE Alu 2 309 -4 2072 118 10 0 chr17 7917301 7917597 -81586956 - AluSx SINE Alu -13 299 1 205 362 92 28 chr17 7917916 7918134 -81586419 - L2 LINE L2 -708 2606 2375 304 268 27 80 chr17 7920412 7920524 -81584029 - MIR SINE MIR -75 187 82 220 261 0 0 chr17 7924451 7924497 -81580056 + C-rich Low_complexity Low_complexity 2 47 0 2292 68 13 7 chr17 7924695 7925002 -81579551 - AluY SINE Alu -1 310 2 1911 118 28 14 chr17 7926446 7926735 -81577818 - AluSx SINE Alu -13 299 7 959 154 91 11 chr17 7929142 7929317 -81575236 - MER5A DNA MER1_type 0 189 1 376 306 11 17 chr17 7931937 7932117 -81572436 + (CCG)n Simple_repeat Simple_repeat 2 180 0 21 36 0 0 chr17 7932324 7932352 -81572201 + GC_rich Low_complexity Low_complexity 1 28 0 943 86 0 0 chr17 7932831 7932959 -81571594 - AluSg/x SINE Alu 0 312 185 1976 99 7 3 chr17 7933055 7933357 -81571196 - AluSx SINE Alu 0 303 1 243 215 32 75 chr17 7933482 7933575 -81570978 + L2 LINE L2 2910 2998 -315 319 298 144 21 chr17 7933605 7933793 -81570760 + L2 LINE L2 3102 3312 -1 258 56 0 0 chr17 7933865 7933914 -81570639 + Alu SINE Alu 1 34 -266 2316 112 0 3 chr17 7934590 7934904 -81569649 + AluSq SINE Alu 1 313 0 1935 106 6 45 chr17 7934918 7935055 -81569498 + AluSx SINE Alu 1 142 -170 2085 78 13 42 chr17 7935055 7935362 -81569191 + AluY SINE Alu 1 298 -13 1935 106 6 45 chr17 7935362 7935536 -81569017 + AluSx SINE Alu 142 300 -12 1509 74 79 0 chr17 7935538 7935741 -81568812 + AluY SINE Alu 1 219 -92 1891 141 0 0 chr17 7935841 7936117 -81568436 - AluSx SINE Alu -36 276 1 1809 149 17 7 chr17 7936194 7936496 -81568057 - AluJb SINE Alu -7 305 1 668 267 172 9 chr17 7936602 7936934 -81567619 + MLT1G3 LTR MaLR 8 357 -173 2426 57 0 0 chr17 7937072 7937368 -81567185 + AluY SINE Alu 1 296 -15 395 328 111 16 chr17 7937570 7937759 -81566794 - L2 LINE L2 0 3313 3107 1207 131 0 0 chr17 7937804 7937979 -81566574 - AluSg/x SINE Alu -4 306 132 1953 59 4 0 chr17 7937979 7938217 -81566336 - AluSx SINE Alu -15 297 59 1824 146 0 55 chr17 7938394 7938544 -81566009 + AluJo SINE Alu 1 125 -187 2268 90 7 0 chr17 7938544 7938844 -81565709 + AluSg SINE Alu 1 302 -8 1824 146 0 55 chr17 7938844 7939021 -81565532 + AluJo SINE Alu 125 310 -2 2017 108 4 0 chr17 7939180 7939481 -81565072 + AluSx SINE Alu 6 307 0 235 340 65 39 chr17 7939574 7939806 -81564747 - L2 LINE L2 -224 3048 2811 196 322 163 56 chr17 7939798 7940031 -81564522 - L2 LINE L2 -763 2551 2294 * 1843 87 4 12 chr17 7940122 7940375 -81564178 + AluSc SINE Alu 1 251 -58 545 302 42 0 chr17 7940490 7940679 -81563874 + MIR SINE MIR 6 202 -60 380 295 0 0 chr17 7940679 7940791 -81563762 + MLT1F LTR MaLR 1 112 -430 752 220 19 3 chr17 7940796 7940965 -81563588 + MLT1F LTR MaLR 65 281 -314 2143 97 7 0 chr17 7940965 7941254 -81563299 + AluSx SINE Alu 1 291 -21 268 379 0 24 chr17 7941295 7941419 -81563134 - MIR SINE MIR -108 154 34 2071 136 0 0 chr17 7941504 7941799 -81562754 + AluSx SINE Alu 1 295 -17 229 322 89 0 chr17 7941837 7941927 -81562626 - L2 LINE L2 -46 3226 3129 233 307 74 61 chr17 7941943 7942106 -81562447 + L2 LINE L2 3037 3201 -112 1951 141 10 13 chr17 7942975 7943109 -81561444 + AluJb SINE Alu 1 134 -178 2191 105 0 25 chr17 7943109 7943423 -81561130 + AluSx SINE Alu 1 306 -6 1951 141 10 13 chr17 7943423 7943600 -81560953 + AluJb SINE Alu 134 311 -1 2014 157 0 0 chr17 7944209 7944508 -81560045 + AluSx SINE Alu 1 299 -13 2578 174 32 100 chr17 7944508 7944627 -81559926 + L1ME1 LINE L1 5429 5555 -611 1602 211 0 13 chr17 7944627 7944931 -81559622 + AluJo SINE Alu 1 300 -12 2232 78 0 7 chr17 7944933 7945257 -81559296 + AluY SINE Alu 1 322 0 2168 111 0 0 chr17 7945257 7945545 -81559008 + AluSx SINE Alu 2 289 -23 2107 85 32 3 chr17 7945554 7945837 -81558716 + AluSq SINE Alu 1 291 -22 2578 174 32 100 chr17 7945837 7945928 -81558625 + L1ME1 LINE L1 5563 5659 -507 2346 70 0 13 chr17 7945928 7946230 -81558323 + AluY SINE Alu 1 298 -13 2578 174 32 100 chr17 7946230 7946790 -81557763 + L1ME1 LINE L1 5659 6161 -5 1826 100 85 18 chr17 7946908 7947189 -81557364 + AluSq SINE Alu 1 300 -13 1584 218 26 71 chr17 7947351 7947841 -81556712 + MER21B LTR ERV1 1 468 -395 207 100 0 0 chr17 7947846 7947876 -81556677 + (TCCC)n Simple_repeat Simple_repeat 1 30 0 2136 136 7 0 chr17 7947876 7948185 -81556368 - AluSx SINE Alu -1 311 1 1053 99 0 0 chr17 7948191 7948333 -81556220 - AluJb SINE Alu -170 142 1 1222 210 48 12 chr17 7948333 7948666 -81555887 + MER21B LTR ERV1 461 805 -58 219 349 92 0 chr17 7948809 7948918 -81555635 + L2 LINE L2 2705 2823 -491 * 330 248 165 0 chr17 7948897 7949006 -81555547 + L2 LINE L2 3146 3272 0 217 215 0 159 chr17 7949185 7949292 -81555261 + L2 LINE L2 2946 3035 -237 2261 101 0 0 chr17 7949293 7949591 -81554962 - AluSq SINE Alu -15 298 1 290 179 0 0 chr17 7949778 7949834 -81554719 + FLAM_A SINE Alu 11 66 -67 299 302 32 16 chr17 7949910 7950036 -81554517 + L1MEd LINE L1 561 688 -5431 890 209 12 0 chr17 7950050 7950222 -81554331 + FAM SINE Alu 1 46 -3 241 182 121 0 chr17 7950225 7950291 -81554262 + L1MEd LINE L1 682 755 -5364 368 306 64 25 chr17 7950507 7950638 -81553915 + L1M4 LINE L1 2662 2801 -4048 1849 167 23 3 chr17 7950638 7950944 -81553609 + AluJb SINE Alu 1 312 0 368 306 64 25 chr17 7950944 7950969 -81553584 + L1M4 LINE L1 2801 2824 -4025 * 551 332 66 19 chr17 7950951 7950977 -81553576 + L1M4 LINE L1 5047 5070 -1778 1942 127 0 3 chr17 7950977 7951286 -81553267 + AluSg SINE Alu 1 308 0 551 332 66 19 chr17 7951286 7951514 -81553039 + L1M4 LINE L1 5070 5314 -1534 2068 124 0 3 chr17 7951515 7951813 -81552740 + AluSq SINE Alu 1 297 -16 2207 100 3 7 chr17 7951964 7952264 -81552289 + AluSq SINE Alu 1 299 -14 352 296 301 10 chr17 7952505 7952701 -81551852 - MIR SINE MIR -2 260 8 215 245 0 0 chr17 7953169 7953222 -81551331 + T-rich Low_complexity Low_complexity 1 53 0 307 330 106 28 chr17 7953283 7953462 -81551091 - L2 LINE L2 0 3313 3121 2355 54 3 10 chr17 7953501 7953797 -81550756 + AluY SINE Alu 1 294 -17 2081 90 24 7 chr17 7954039 7954327 -81550226 + AluSx SINE Alu 3 295 -17 1975 117 24 0 chr17 7954331 7954622 -81549931 + AluSg1 SINE Alu 3 300 -9 841 146 0 0 chr17 7955406 7955529 -81549024 - AluJb SINE Alu -189 123 1 229 336 64 0 chr17 7955563 7955673 -81548880 - MIR SINE MIR -38 224 108 423 349 43 30 chr17 7957189 7957421 -81547132 + MIR SINE MIR 17 251 -11 1860 163 0 0 chr17 7960829 7961129 -81543424 + AluJb SINE Alu 1 300 -12 1195 133 0 11 chr17 7962854 7963034 -81541519 + AluJo SINE Alu 3 180 -132 335 309 149 54 chr17 7964696 7964778 -81539775 - L2 LINE L2 -74 3239 3166 2259 67 27 3 chr17 7964778 7965078 -81539475 - AluSc SINE Alu -2 307 1 335 309 149 54 chr17 7965078 7965364 -81539189 - L2 LINE L2 -147 3166 2836 23 33 0 0 chr17 7966442 7966472 -81538081 + GC_rich Low_complexity Low_complexity 1 30 0 22 88 0 0 chr17 7966523 7966580 -81537973 + GC_rich Low_complexity Low_complexity 1 57 0 243 321 12 0 chr17 7967125 7967209 -81537344 + GA-rich Low_complexity Low_complexity 6 90 0 182 256 0 0 chr17 7969289 7969328 -81535225 - L2 LINE L2 -3023 291 253 207 100 0 0 chr17 7969512 7969542 -81535011 + (TCCCC)n Simple_repeat Simple_repeat 1 30 0 180 0 0 0 chr17 7969715 7969735 -81534818 + (A)n Simple_repeat Simple_repeat 1 20 0 327 341 93 48 chr17 7971088 7971523 -81533030 + L1MEd LINE L1 814 1256 -4863 276 130 0 0 chr17 7974219 7974265 -81530288 + (CCG)n Simple_repeat Simple_repeat 3 48 0 2184 85 23 3 chr17 7975192 7975499 -81529054 + AluSp SINE Alu 1 313 0 2213 62 10 16 chr17 7975513 7975819 -81528734 + AluSg SINE Alu 1 304 -6 2249 96 3 3 chr17 7976026 7976338 -81528215 + AluSx SINE Alu 1 312 0 212 307 27 0 chr17 7976375 7976450 -81528103 + MIR SINE MIR 84 160 -102 1228 199 12 72 chr17 7976494 7976815 -81527738 + AluJo SINE Alu 1 302 -10 228 35 0 0 chr17 7976939 7976968 -81527585 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 299 227 21 31 chr17 7977016 7977113 -81527440 + L1M4 LINE L1 5587 5682 -492 1559 102 13 0 chr17 7977117 7977343 -81527210 + AluY SINE Alu 1 229 -82 186 278 97 0 chr17 7977444 7977516 -81527037 + MIR SINE MIR 128 206 -56 2109 105 0 3 chr17 7977532 7977828 -81526725 - AluSx SINE Alu -17 295 1 1575 153 41 57 chr17 7979297 7979611 -81524942 - AluJo SINE Alu -3 309 1 4329 183 36 46 chr17 7980214 7981177 -81523376 + LTR13 LTR ERVK 1 954 0 2203 110 0 3 chr17 7981907 7982216 -81522337 - AluSg SINE Alu -1 309 2 2155 119 0 0 chr17 7982227 7982530 -81522023 - AluSx SINE Alu -4 308 6 224 226 30 83 chr17 7984428 7984561 -81519992 + G-rich Low_complexity Low_complexity 6 131 0 1730 186 3 0 chr17 7985051 7985342 -81519211 + AluJo SINE Alu 1 292 -20 833 272 92 13 chr17 7985645 7986140 -81518413 - L2 LINE L2 -69 3244 2709 385 214 0 0 chr17 7986156 7986226 -81518327 - MER91B DNA MER1_type -1 189 120 1995 164 0 0 chr17 7986235 7986547 -81518006 - AluSx SINE Alu 0 312 1 2011 117 7 10 chr17 7986566 7986866 -81517687 - AluSx SINE Alu 0 312 14 340 302 69 25 chr17 7986867 7987026 -81517527 - MER91B DNA MER1_type -13 177 12 239 209 0 75 chr17 7989416 7989483 -81515070 - L2 LINE L2 -18 3254 3193 450 273 120 34 chr17 7990218 7990303 -81514250 + MIR SINE MIR 1 77 -185 2334 64 7 0 chr17 7990303 7990598 -81513955 - AluY SINE Alu -14 297 1 450 273 120 34 chr17 7990598 7990721 -81513832 + MIR SINE MIR 77 227 -35 2412 40 0 13 chr17 7991533 7991833 -81512720 - AluSc SINE Alu -13 296 1 270 247 12 49 chr17 7992014 7992095 -81512458 - L2 LINE L2 0 3313 3236 30 45 0 0 chr17 7992992 7993036 -81511517 + GC_rich Low_complexity Low_complexity 1 44 0 1012 177 21 0 chr17 7997896 7998088 -81506465 + MER20 DNA MER1_type 1 196 -23 730 120 16 0 chr17 7998108 7998233 -81506320 + GA-rich Low_complexity Low_complexity 3 129 0 434 259 28 0 chr17 7998449 7998557 -81505996 - MER5B DNA MER1_type -5 173 63 2343 99 3 0 chr17 7998660 7998972 -81505581 - AluSq SINE Alu 0 313 1 47 14 0 29 chr17 7998983 7999019 -81505534 + AT_rich Low_complexity Low_complexity 1 36 -31 2162 114 3 0 chr17 7999019 7999316 -81505237 - AluSx SINE Alu -14 298 1 47 14 0 29 chr17 7999316 7999348 -81505205 + AT_rich Low_complexity Low_complexity 36 67 0 717 217 0 0 chr17 7999348 7999468 -81505085 - FLAM_C SINE Alu -23 120 1 276 272 0 87 chr17 7999495 7999587 -81504966 - MIR3 SINE MIR -49 159 76 21 0 0 0 chr17 8050508 8050529 -81454024 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 8051518 8051546 -81453007 + AT_rich Low_complexity Low_complexity 1 28 0 33 56 0 0 chr17 8052163 8052217 -81452336 + AT_rich Low_complexity Low_complexity 1 54 0 2008 164 66 94 chr17 8052543 8053072 -81451481 - LTR8A LTR ERV1 0 727 214 1114 188 0 0 chr17 8053205 8053423 -81451130 + L1 LINE L1 3592 3809 -2337 22 35 0 0 chr17 8053748 8053777 -81450776 + AT_rich Low_complexity Low_complexity 1 29 0 622 282 106 18 chr17 8053897 8054124 -81450429 + MLT1D LTR MaLR 259 505 0 266 132 19 0 chr17 8054295 8054348 -81450205 + (TA)n Simple_repeat Simple_repeat 1 54 0 1894 171 68 11 chr17 8054355 8054706 -81449847 - MSTB LTR MaLR -55 371 1 687 169 16 0 chr17 8054706 8054830 -81449723 - MSTB-int LTR MaLR 0 1651 1526 358 296 45 0 chr17 8054937 8055069 -81449484 + MIR SINE MIR 121 258 -4 204 40 0 0 chr17 8055266 8055291 -81449262 + (T)n Simple_repeat Simple_repeat 1 25 0 326 317 102 18 chr17 8055697 8055864 -81448689 - MIR3 SINE MIR -3 205 25 31 26 0 0 chr17 8056171 8056209 -81448344 + AT_rich Low_complexity Low_complexity 1 38 0 229 265 44 0 chr17 8056690 8056758 -81447795 + MIR SINE MIR 129 199 -63 661 144 23 0 chr17 8056883 8057015 -81447538 - L1MD1 LINE L1 -1 6241 6107 879 95 0 0 chr17 8057115 8057255 -81447298 + AluSg/x SINE Alu 168 307 0 2168 105 4 0 chr17 8057470 8057747 -81446806 - AluSq SINE Alu -35 278 1 816 103 52 0 chr17 8058371 8058517 -81446036 + AluY SINE Alu 163 314 0 2269 105 10 0 chr17 8058582 8058878 -81445675 - AluSq SINE Alu -14 299 1 450 267 116 0 chr17 8058878 8059024 -81445529 + MIR SINE MIR 97 259 -3 606 273 34 59 chr17 8059043 8059281 -81445272 - MIR SINE MIR -14 248 17 564 94 0 24 chr17 8059347 8059432 -81445121 + AluS SINE Alu 2 84 -229 293 229 10 52 chr17 8059432 8059528 -81445025 - L2 LINE L2 -414 2899 2808 2270 118 0 13 chr17 8059700 8060015 -81444538 - AluSx SINE Alu -1 311 1 679 232 24 66 chr17 8060403 8060474 -81444079 - L2 LINE L2 -538 2776 2704 2284 118 0 6 chr17 8060474 8060788 -81443765 - AluSx SINE Alu 0 312 1 679 232 24 66 chr17 8060788 8060927 -81443626 - L2 LINE L2 -610 2704 2575 1250 172 98 8 chr17 8060927 8061171 -81443382 + MER66B LTR ERV1 1 266 -220 2034 137 7 3 chr17 8061171 8061464 -81443089 + AluSx SINE Alu 1 294 -18 246 175 79 0 chr17 8061471 8061534 -81443019 - L2 LINE L2 -907 2407 2340 2290 109 3 3 chr17 8061535 8061846 -81442707 - AluSq SINE Alu -2 311 1 1448 157 7 19 chr17 8061967 8062265 -81442288 + MER61C LTR ERV1 17 404 -30 887 255 40 6 chr17 8062266 8062363 -81442190 + L1M4 LINE L1 1368 1460 -5082 2352 89 0 43 chr17 8062363 8062689 -81441864 + AluSx SINE Alu 1 312 0 887 255 40 6 chr17 8062689 8062913 -81441640 + L1M4 LINE L1 1460 1700 -4842 * 1085 204 28 34 chr17 8062894 8062926 -81441627 + L1MB8 LINE L1 5709 5740 -438 2238 107 10 7 chr17 8062926 8063236 -81441317 + AluSx SINE Alu 1 311 -1 1085 204 28 34 chr17 8063236 8063527 -81441026 + L1MB8 LINE L1 5740 6030 -148 2291 102 10 13 chr17 8063527 8063832 -81440721 - AluSg SINE Alu -6 304 1 1852 120 25 11 chr17 8063832 8064114 -81440439 - AluSq SINE Alu -5 308 22 823 109 0 0 chr17 8064214 8064324 -81440229 + AluSg/x SINE Alu 192 301 -8 2076 94 3 74 chr17 8064340 8064649 -81439904 + AluSq SINE Alu 16 302 -11 674 243 36 61 chr17 8064672 8064772 -81439781 - MIR SINE MIR -20 242 141 1981 83 55 0 chr17 8064772 8065026 -81439527 - AluSq SINE Alu -45 268 1 674 243 36 61 chr17 8065026 8065172 -81439381 - MIR SINE MIR -121 141 2 229 347 90 33 chr17 8065258 8065655 -81438898 + L2 LINE L2 2457 2901 -371 721 204 0 0 chr17 8065655 8065787 -81438766 + FLAM_A SINE Alu 1 132 -1 229 347 90 33 chr17 8065787 8065965 -81438588 + L2 LINE L2 2901 3067 -205 841 276 43 16 chr17 8066190 8066444 -81438109 + MIR SINE MIR 2 262 0 257 289 33 8 chr17 8068815 8068885 -81435668 + C-rich Low_complexity Low_complexity 1 77 -47 204 40 0 0 chr17 8068885 8068910 -81435643 + (CCG)n Simple_repeat Simple_repeat 3 27 0 257 289 33 8 chr17 8068910 8068960 -81435593 + C-rich Low_complexity Low_complexity 77 124 0 180 0 0 0 chr17 8068979 8068999 -81435554 + (CCG)n Simple_repeat Simple_repeat 1 20 0 2658 39 0 3 chr17 8069727 8070033 -81434520 + AluY SINE Alu 1 305 -6 2057 110 7 29 chr17 8070162 8070470 -81434083 + AluSp SINE Alu 1 301 -12 1222 145 0 6 chr17 8070470 8070649 -81433904 + AluSp SINE Alu 134 311 -2 696 283 85 63 chr17 8074508 8074727 -81429826 - L2 LINE L2 -13 3300 3087 1880 82 0 0 chr17 8074727 8074993 -81429560 - AluSx SINE Alu 0 319 54 698 101 14 79 chr17 8074999 8075138 -81429415 - FLAM_C SINE Alu 0 133 4 696 283 85 63 chr17 8075138 8075594 -81428959 - L2 LINE L2 -230 3083 2583 308 278 56 0 chr17 8075716 8075806 -81428747 + L1ME LINE L1 4959 5053 -1093 566 264 148 28 chr17 8075932 8076301 -81428252 + L1ME LINE L1 5144 5583 -833 2232 109 7 0 chr17 8076301 8076595 -81427958 - AluSq SINE Alu -17 296 1 566 264 148 28 chr17 8076595 8076672 -81427881 + L1ME LINE L1 5583 5649 -767 878 307 118 33 chr17 8076694 8077292 -81427261 + L2 LINE L2 2370 2916 -397 1471 104 54 117 chr17 8077292 8077408 -81427145 - AluJo SINE Alu -15 297 175 2046 129 7 0 chr17 8077408 8077688 -81426865 + AluSg SINE Alu 17 298 -12 2533 67 0 0 chr17 8077688 8077987 -81426566 + AluY SINE Alu 1 299 -12 1471 104 54 117 chr17 8077987 8078186 -81426367 - AluJo SINE Alu -135 177 1 878 307 118 33 chr17 8078186 8078451 -81426102 + L2 LINE L2 2916 3313 0 378 340 49 14 chr17 8078452 8078596 -81425957 + L1ME LINE L1 5653 5801 -320 1614 204 104 49 chr17 8078613 8079073 -81425480 + MER119 DNA MER1_type 5 501 -82 1962 138 7 10 chr17 8079073 8079363 -81425190 - AluSx SINE Alu -23 289 1 1614 204 104 49 chr17 8079363 8079451 -81425102 + MER119 DNA MER1_type 501 583 0 736 145 0 30 chr17 8079549 8079680 -81424873 + FLAM_C SINE Alu 9 135 -8 1462 186 0 0 chr17 8079682 8079918 -81424635 + AluSq SINE Alu 1 236 -77 2121 127 0 17 chr17 8080449 8080749 -81423804 - AluSg SINE Alu -15 295 1 1076 96 0 0 chr17 8080749 8080885 -81423668 - AluSq/x SINE Alu -176 136 1 642 290 125 8 chr17 8080981 8081229 -81423324 - L2 LINE L2 -4 3268 2992 2166 134 16 0 chr17 8081575 8081882 -81422671 + AluSx SINE Alu 1 312 0 540 298 110 44 chr17 8082468 8082787 -81421766 - L2 LINE L2 -8 3264 2925 40 0 0 0 chr17 8082966 8083006 -81421547 + AT_rich Low_complexity Low_complexity 1 40 0 207 343 127 6 chr17 8083014 8083180 -81421373 - L2 LINE L2 -604 2710 2525 417 63 48 16 chr17 8083210 8083273 -81421280 + Alu SINE Alu 227 291 -20 226 381 58 17 chr17 8083503 8083676 -81420877 - L2 LINE L2 -905 2409 2230 548 163 163 57 chr17 8083683 8083824 -81420729 - Tigger1 DNA MER2_type 0 2418 2263 2467 89 0 7 chr17 8083827 8084130 -81420423 - AluSx SINE Alu -11 301 1 2364 84 20 0 chr17 8084296 8084595 -81419958 + AluSc SINE Alu 1 305 -4 286 245 70 77 chr17 8086424 8086567 -81417986 + MIR SINE MIR 47 188 -74 2196 111 0 26 chr17 8087935 8088241 -81416312 - AluSx SINE Alu -8 304 7 2631 50 0 3 chr17 8089182 8089483 -81415070 + AluY SINE Alu 1 300 -11 1997 146 7 0 chr17 8089491 8089778 -81414775 + AluSq SINE Alu 1 289 -24 343 351 17 41 chr17 8093208 8093462 -81411091 - MIR SINE MIR 0 262 16 1905 97 43 18 chr17 8093500 8093778 -81410775 + AluSg SINE Alu 1 285 -25 26 0 0 0 chr17 8093916 8093942 -81410611 + AT_rich Low_complexity Low_complexity 1 26 0 3175 183 47 23 chr17 8093950 8093997 -81410556 + L1MB7 LINE L1 4456 4500 -1646 2082 112 14 0 chr17 8093997 8094293 -81410260 + AluSp SINE Alu 1 300 -13 3175 183 47 23 chr17 8094293 8095118 -81409435 + L1MB7 LINE L1 4500 5349 -797 2243 105 3 0 chr17 8095120 8095426 -81409127 + AluSp SINE Alu 1 307 -6 1077 45 0 8 chr17 8095428 8095560 -81408993 + AluY SINE Alu 1 131 -180 1779 180 91 36 chr17 8095565 8096037 -81408516 + L1MB7 LINE L1 5329 5826 -358 1543 151 50 14 chr17 8096050 8096328 -81408225 + AluSx SINE Alu 8 295 -17 1742 159 28 14 chr17 8096337 8096627 -81407926 + AluJb SINE Alu 1 294 -18 706 210 0 0 chr17 8096655 8096774 -81407779 + FLAM_C SINE Alu 1 119 -24 320 164 27 14 chr17 8096778 8096851 -81407702 + L1MC3 LINE L1 5850 5923 -1862 2152 93 7 14 chr17 8096969 8097260 -81407293 + AluSx SINE Alu 1 289 -23 186 217 87 58 chr17 8097557 8097626 -81406927 + L2 LINE L2 2159 2229 -1085 2145 127 0 3 chr17 8097811 8098119 -81406434 + AluSq SINE Alu 3 309 -4 1511 64 11 0 chr17 8099010 8099197 -81405356 + AluSp SINE Alu 1 189 -124 2224 96 10 0 chr17 8099630 8099931 -81404622 + AluSp SINE Alu 1 304 -9 671 162 0 9 chr17 8100254 8100365 -81404188 + AluSp SINE Alu 190 299 -14 383 276 0 42 chr17 8102462 8102781 -81401772 + (CCCA)n Simple_repeat Simple_repeat 1 305 0 200 324 0 41 chr17 8103178 8103348 -81401205 + (CCCA)n Simple_repeat Simple_repeat 1 163 0 246 307 57 11 chr17 8104026 8104114 -81400439 - L2 LINE L2 -27 3286 3195 243 295 57 16 chr17 8104143 8104265 -81400288 - L1ME4a LINE L1 -28 6093 5967 2008 135 10 3 chr17 8104479 8104783 -81399770 - AluSx SINE Alu -6 306 1 349 186 21 52 chr17 8104785 8104882 -81399671 - L1MDa LINE L1 -4595 1945 1852 297 184 23 46 chr17 8104892 8104979 -81399574 - LTR9 LTR ERV1 -86 526 442 315 281 79 14 chr17 8104992 8105131 -81399422 - L1MDa LINE L1 -4707 1833 1686 234 185 37 0 chr17 8105131 8105185 -81399368 - MLT2B2 LTR ERVL 0 515 460 2053 189 23 63 chr17 8105279 8105754 -81398799 - MLT2B2 LTR ERVL -58 457 2 307 304 41 50 chr17 8105756 8105855 -81398698 - L1MDa LINE L1 -4853 1687 1589 2262 91 0 0 chr17 8105855 8106152 -81398401 - AluY SINE Alu -14 297 1 307 304 41 50 chr17 8106152 8106272 -81398281 - L1MDa LINE L1 -4951 1589 1470 1924 127 9 51 chr17 8106277 8106593 -81397960 - AluSx SINE Alu -9 303 1 192 40 0 0 chr17 8106603 8106628 -81397925 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2444 60 0 0 chr17 8106657 8106958 -81397595 - AluY SINE Alu -10 301 1 879 227 152 4 chr17 8106961 8107225 -81397328 + MER82 DNA MER2_type 351 653 0 1859 151 14 0 chr17 8107292 8107577 -81396976 - AluJb SINE Alu -23 289 1 1995 129 23 7 chr17 8107584 8107887 -81396666 - AluSc SINE Alu -1 308 1 306 230 69 46 chr17 8107892 8107979 -81396574 - L1M4 LINE L1 -3173 2973 2885 381 43 0 0 chr17 8107990 8108037 -81396516 + (TA)n Simple_repeat Simple_repeat 2 48 0 1880 124 9 46 chr17 8108037 8108350 -81396203 - AluSx SINE Alu -8 304 2 485 271 76 38 chr17 8108414 8108505 -81396048 - L1M4 LINE L1 -3700 2446 2360 2239 114 0 0 chr17 8108505 8108811 -81395742 - AluSx SINE Alu -6 306 1 485 271 76 38 chr17 8108811 8109033 -81395520 - L1M4 LINE L1 -3786 2360 2121 32 67 0 0 chr17 8109189 8109249 -81395304 + AT_rich Low_complexity Low_complexity 1 60 0 804 226 6 0 chr17 8109268 8109432 -81395121 + AluJb SINE Alu 121 285 -27 21 0 0 0 chr17 8110088 8110109 -81394444 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 8110316 8110337 -81394216 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 8112412 8112440 -81392113 + GC_rich Low_complexity Low_complexity 1 28 0 206 175 0 18 chr17 8112459 8112516 -81392037 + (CCG)n Simple_repeat Simple_repeat 3 58 0 189 0 0 0 chr17 8112949 8112970 -81391583 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 30 27 0 0 chr17 8113959 8113996 -81390557 + GC_rich Low_complexity Low_complexity 1 37 0 237 33 0 0 chr17 8115083 8115113 -81389440 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 203 328 0 0 chr17 8115313 8115377 -81389176 + C-rich Low_complexity Low_complexity 5 68 0 891 143 0 0 chr17 8116451 8116584 -81387969 - AluSq/x SINE Alu -179 133 1 282 285 49 8 chr17 8120361 8120484 -81384069 + MER112 DNA MER1_type 34 161 -99 507 17 0 0 chr17 8120484 8120544 -81384009 + (TG)n Simple_repeat Simple_repeat 1 60 0 568 165 0 52 chr17 8120548 8120663 -81383890 - FLAM_C SINE Alu -34 109 1 275 268 12 0 chr17 8120663 8120745 -81383808 + MER112 DNA MER1_type 166 248 -12 398 348 6 25 chr17 8120750 8120908 -81383645 - MIR3 SINE MIR -39 169 15 29 47 0 0 chr17 8121141 8121184 -81383369 + GC_rich Low_complexity Low_complexity 1 43 0 2210 97 16 3 chr17 8121967 8122275 -81382278 + AluSq SINE Alu 2 313 0 2287 83 3 3 chr17 8122276 8122577 -81381976 + AluSq SINE Alu 1 301 -12 2508 53 0 0 chr17 8123277 8123576 -81380977 - AluY SINE Alu -12 299 1 822 169 0 0 chr17 8123692 8123816 -81380737 + AluJb SINE Alu 162 285 -27 855 145 0 0 chr17 8123820 8123944 -81380609 - FLAM_C SINE Alu -19 124 1 2344 86 3 0 chr17 8124550 8124854 -81379699 - AluSq SINE Alu -8 305 1 2490 49 3 0 chr17 8125801 8126108 -81378445 - AluSx SINE Alu -4 308 1 417 276 32 32 chr17 8126751 8126790 -81377763 + L2 LINE L2 3190 3228 -85 2399 65 3 0 chr17 8126790 8127084 -81377469 + AluSp SINE Alu 1 295 -18 417 276 32 32 chr17 8127084 8127167 -81377386 + L2 LINE L2 3227 3312 -1 791 186 0 0 chr17 8127210 8127339 -81377214 + FLAM_C SINE Alu 2 130 -3 330 282 64 9 chr17 8127536 8127646 -81376907 + MIR SINE MIR 96 211 -51 2129 102 0 0 chr17 8127724 8128009 -81376544 - AluSg SINE Alu -9 301 17 867 142 0 0 chr17 8128112 8128232 -81376321 - FLAM_C SINE Alu -23 120 1 2230 103 7 0 chr17 8128261 8128562 -81375991 + AluSq SINE Alu 3 305 -8 210 200 20 0 chr17 8129746 8129796 -81374757 + (TA)n Simple_repeat Simple_repeat 1 51 0 369 141 0 0 chr17 8132774 8132845 -81371708 + (TCC)n Simple_repeat Simple_repeat 2 72 0 740 83 28 0 chr17 8134098 8134206 -81370347 + AluSg/x SINE Alu 201 311 -1 2289 85 0 29 chr17 8134309 8134625 -81369928 + AluSx SINE Alu 1 307 -5 2557 50 0 0 chr17 8134629 8134931 -81369622 + AluY SINE Alu 2 303 -8 2053 97 13 32 chr17 8134932 8135243 -81369310 + AluSg SINE Alu 2 306 -4 615 152 20 0 chr17 8135243 8135342 -81369211 - AluJo/FLAM SINE Alu -187 125 25 432 161 0 0 chr17 8136221 8136302 -81368251 + GA-rich Low_complexity Low_complexity 3 83 0 2224 77 0 26 chr17 8137841 8138151 -81366402 + AluSq SINE Alu 1 302 -11 817 111 8 0 chr17 8138921 8139038 -81365515 - AluSg/x SINE Alu -13 299 182 1817 125 22 47 chr17 8139570 8139889 -81364664 + AluSx SINE Alu 1 311 -1 2182 103 3 0 chr17 8139891 8140192 -81364361 + AluSc SINE Alu 1 302 -7 2044 143 0 0 chr17 8140204 8140498 -81364055 + AluJo SINE Alu 1 294 -18 2159 109 0 7 chr17 8140500 8140802 -81363751 + AluSq SINE Alu 1 300 -13 439 353 0 0 chr17 8140806 8140928 -81363625 - MIR SINE MIR -136 126 5 322 331 190 0 chr17 8140981 8141123 -81363430 - MER91A DNA MER1_type -22 174 6 1271 152 0 14 chr17 8141279 8141489 -81363064 - AluJo SINE Alu -19 293 87 198 329 0 14 chr17 8141492 8141565 -81362988 - MIR SINE MIR -21 241 170 657 197 16 8 chr17 8141749 8141871 -81362682 + MIR SINE MIR 76 198 -64 425 295 98 6 chr17 8142095 8142278 -81362275 + L2 LINE L2 2942 3141 -172 2320 81 0 0 chr17 8142279 8142577 -81361976 - AluSg SINE Alu -12 298 1 926 135 0 14 chr17 8142578 8142719 -81361834 - AluSq/x SINE Alu -173 139 1 1840 166 3 10 chr17 8142720 8143033 -81361520 - AluJb SINE Alu -1 311 1 2055 78 0 32 chr17 8143040 8143200 -81361353 - AluSx SINE Alu -15 297 148 2413 56 0 10 chr17 8143200 8143503 -81361050 - AluY SINE Alu -11 300 1 2055 78 0 32 chr17 8143503 8143626 -81360927 - AluSx SINE Alu -164 148 23 1713 179 0 10 chr17 8143637 8143938 -81360615 - AluJb SINE Alu -14 298 1 2068 115 0 38 chr17 8143993 8144307 -81360246 - AluSx SINE Alu -8 304 3 1782 167 3 10 chr17 8144309 8144609 -81359944 - AluJb SINE Alu -14 298 1 332 241 0 80 chr17 8144610 8144722 -81359831 + L2 LINE L2 3210 3312 -1 821 93 0 0 chr17 8144821 8144928 -81359625 + AluSq/x SINE Alu 1 107 -205 430 341 0 0 chr17 8146967 8147143 -81357410 + (CTGGGG)n Simple_repeat Simple_repeat 3 178 0 214 278 17 17 chr17 8147183 8147298 -81357255 + (CTGGGG)n Simple_repeat Simple_repeat 1 115 0 356 309 6 23 chr17 8147318 8147493 -81357060 + (CTGGGG)n Simple_repeat Simple_repeat 2 173 0 1857 100 55 52 chr17 8148817 8149023 -81355530 - AluSx SINE Alu -1 311 102 2321 89 0 7 chr17 8149023 8149327 -81355226 - AluY SINE Alu -9 302 1 1857 100 55 52 chr17 8149327 8149430 -81355123 - AluSx SINE Alu -210 102 1 237 178 0 0 chr17 8151012 8151057 -81353496 + (CGG)n Simple_repeat Simple_repeat 3 47 0 2012 123 18 0 chr17 8152517 8152802 -81351751 + AluSx SINE Alu 1 290 -22 609 14 0 0 chr17 8152803 8152873 -81351680 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 1781 110 88 0 chr17 8152877 8153175 -81351378 + AluSx SINE Alu 2 323 0 298 325 16 16 chr17 8153735 8153858 -81350695 + MIR SINE MIR 73 195 -67 2430 71 0 19 chr17 8153880 8154191 -81350362 - AluY SINE Alu -6 305 1 2039 78 13 49 chr17 8154191 8154498 -81350055 - AluY SINE Alu -15 296 1 971 155 25 6 chr17 8154782 8154943 -81349610 + AluJb SINE Alu 120 283 -29 1336 160 53 97 chr17 8154963 8155100 -81349453 + AluJo SINE Alu 3 144 -168 1983 129 0 7 chr17 8155100 8155394 -81349159 + AluSx SINE Alu 5 296 -16 1336 160 53 97 chr17 8155394 8155426 -81349127 + AluJo SINE Alu 144 176 -136 180 0 0 0 chr17 8155426 8155446 -81349107 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1336 160 53 97 chr17 8155446 8155594 -81348959 + AluJo SINE Alu 176 307 -5 224 208 21 0 chr17 8159170 8159218 -81345335 + G-rich Low_complexity Low_complexity 1 49 0 250 289 0 10 chr17 8159632 8159736 -81344817 + G-rich Low_complexity Low_complexity 3 105 0 290 287 22 39 chr17 8160556 8160737 -81343816 + (CAGA)n Simple_repeat Simple_repeat 3 180 0 * 307 279 12 43 chr17 8160688 8160849 -81343704 + (CAGAGA)n Simple_repeat Simple_repeat 4 159 0 244 273 45 0 chr17 8161117 8161183 -81343370 + L2 LINE L2 3210 3278 -35 328 159 16 0 chr17 8163469 8163532 -81341021 - MER61-int LTR ERV1 -239 4978 4915 2006 99 64 3 chr17 8163532 8163814 -81340739 + AluSx SINE Alu 1 299 -13 1892 97 44 69 chr17 8163817 8164136 -81340417 + AluSq SINE Alu 3 313 0 6060 110 7 8 chr17 8164138 8165092 -81339461 - MER61-int LTR ERV1 -631 4586 3634 1973 114 61 7 chr17 8165100 8165397 -81339156 - AluSp SINE Alu 0 313 1 320 176 0 14 chr17 8165402 8165476 -81339077 + C-rich Low_complexity Low_complexity 1 73 0 1921 136 0 4 chr17 8165485 8165765 -81338788 - AluSx SINE Alu -33 279 1 5706 96 6 22 chr17 8165765 8166394 -81338159 - MER61-int LTR ERV1 -1586 3631 3018 2424 58 0 0 chr17 8166394 8166689 -81337864 - AluY SINE Alu -16 295 1 5706 96 6 22 chr17 8166689 8166966 -81337587 - MER61-int LTR ERV1 -2199 3018 2738 2899 55 3 31 chr17 8166966 8167081 -81337472 - L1PA8 LINE L1 -2 6170 6053 2066 101 7 7 chr17 8167081 8167096 -81337457 - AluSp SINE Alu -17 296 282 270 0 0 0 chr17 8167096 8167126 -81337427 + (TG)n Simple_repeat Simple_repeat 1 30 0 198 0 0 0 chr17 8167125 8167147 -81337406 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 2066 101 7 7 chr17 8167126 8167427 -81337126 - AluSp SINE Alu -30 283 1 2899 55 3 31 chr17 8167427 8167692 -81336861 - L1PA8 LINE L1 -119 6053 5801 1949 134 7 0 chr17 8217837 8218121 -81286432 - AluSx SINE Alu -26 286 1 1626 160 93 0 chr17 8218153 8218422 -81286131 + AluJo SINE Alu 6 299 -13 2467 54 0 10 chr17 8218537 8218832 -81285721 - AluY SINE Alu -19 292 1 274 315 35 54 chr17 8219280 8219483 -81285070 + L2 LINE L2 2431 2629 -685 324 293 32 75 chr17 8219636 8219824 -81284729 - L2 LINE L2 -189 3083 2904 2664 52 0 0 chr17 8219868 8220175 -81284378 - AluY SINE Alu -4 307 1 372 298 113 36 chr17 8220261 8220509 -81284044 - L2 LINE L2 -785 2529 2263 344 272 28 51 chr17 8220590 8220616 -81283937 + L1ME3A LINE L1 5278 5303 -2505 2453 97 3 0 chr17 8220616 8220927 -81283626 + AluSx SINE Alu 1 312 0 344 272 28 51 chr17 8220927 8220955 -81283598 + L1ME3A LINE L1 5303 5330 -2478 2181 134 7 3 chr17 8220955 8221262 -81283291 + AluSx SINE Alu 1 308 -4 344 272 28 51 chr17 8221262 8221423 -81283130 + L1ME3A LINE L1 5330 5489 -2319 1307 180 9 0 chr17 8221448 8221659 -81282894 - AluJo SINE Alu -15 297 85 419 324 99 17 chr17 8221659 8221952 -81282601 + L1ME3A LINE L1 5517 5833 -337 1549 163 19 70 chr17 8222027 8222173 -81282380 + AluJo SINE Alu 1 153 -159 2173 93 4 7 chr17 8222173 8222451 -81282102 + AluSg1 SINE Alu 1 277 -32 306 0 0 0 chr17 8222453 8222487 -81282066 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1549 163 19 70 chr17 8222487 8222650 -81281903 + AluJo SINE Alu 154 297 -15 2014 132 4 4 chr17 8222715 8222996 -81281557 + AluSx SINE Alu 1 281 -31 2226 91 0 0 chr17 8223155 8223429 -81281124 - AluY SINE Alu -37 274 1 195 0 86 0 chr17 8223521 8223556 -81280997 + (TA)n Simple_repeat Simple_repeat 1 38 0 498 291 95 75 chr17 8223585 8223759 -81280794 + L1M4 LINE L1 4217 4386 -1760 2147 144 7 0 chr17 8223759 8224065 -81280488 + AluSx SINE Alu 1 308 -4 498 291 95 75 chr17 8224065 8224333 -81280220 + L1M4 LINE L1 4386 4668 -1478 2159 100 4 4 chr17 8224375 8224654 -81279899 + AluSc SINE Alu 1 279 -30 1836 108 8 4 chr17 8224667 8224926 -81279627 + AluSx SINE Alu 44 303 -9 2042 142 0 3 chr17 8224933 8225228 -81279325 + AluSx SINE Alu 1 294 -18 323 208 39 39 chr17 8225796 8225873 -81278680 - MIR SINE MIR -64 198 122 286 286 0 0 chr17 8225893 8225956 -81278597 + L2 LINE L2 1183 1245 -2069 2205 86 41 14 chr17 8226174 8226466 -81278087 + AluSg SINE Alu 1 300 -10 1050 104 7 0 chr17 8226476 8226611 -81277942 + AluSq/x SINE Alu 1 136 -176 2353 74 7 10 chr17 8226611 8226908 -81277645 + AluSg SINE Alu 1 296 -14 1479 137 10 0 chr17 8227123 8227328 -81277225 - AluSx SINE Alu -105 207 1 981 42 21 0 chr17 8227332 8227475 -81277078 + (TCTA)n Simple_repeat Simple_repeat 1 146 0 397 200 60 0 chr17 8227475 8227575 -81276978 - FLAM_C SINE Alu -17 116 11 1817 158 3 7 chr17 8227586 8227871 -81276682 - AluSx SINE Alu -28 284 1 1427 239 106 20 chr17 8227871 8228373 -81276180 + HAL1 LINE L1 1600 2144 -363 477 139 0 13 chr17 8228375 8228454 -81276099 + AluS SINE Alu 2 79 -233 2231 110 13 7 chr17 8228756 8229064 -81275489 - AluSq SINE Alu 0 313 4 23 54 0 0 chr17 8229129 8229166 -81275387 + AT_rich Low_complexity Low_complexity 1 37 0 2036 151 0 3 chr17 8229167 8229478 -81275075 - AluSx SINE Alu -2 310 1 571 133 133 26 chr17 8229478 8229591 -81274962 - AluJo SINE Alu -177 135 11 404 217 8 47 chr17 8229904 8230033 -81274520 + AluSq/x SINE Alu 1 124 -189 2188 86 4 0 chr17 8230246 8230533 -81274020 + AluSp SINE Alu 17 304 0 311 294 13 77 chr17 8230967 8231202 -81273351 - AluJb SINE Alu -11 291 108 480 179 0 0 chr17 8231535 8231619 -81272934 + AluJ/FRAM SINE Alu 216 299 -13 1200 193 10 0 chr17 8231734 8231941 -81272612 - AluJo SINE Alu -19 293 85 212 286 236 11 chr17 8233373 8233555 -81270998 + L2 LINE L2 2492 2714 -600 1285 117 0 48 chr17 8233560 8233748 -81270805 + AluSc SINE Alu 1 179 -130 2242 98 0 7 chr17 8234087 8234374 -81270179 + AluY SINE Alu 1 285 -26 616 229 150 9 chr17 8234383 8234598 -81269955 - L1MB2 LINE L1 -21 6150 5900 1945 170 0 0 chr17 8234598 8234904 -81269649 - AluJb SINE Alu -6 306 1 616 229 150 9 chr17 8234904 8234915 -81269638 - L1MB2 LINE L1 -271 5900 5892 866 157 0 0 chr17 8235109 8235230 -81269323 - FLAM_C SINE Alu -22 121 1 663 253 54 5 chr17 8235421 8235607 -81268946 + MIR SINE MIR 67 261 -1 2144 126 7 0 chr17 8235865 8236158 -81268395 - AluSx SINE Alu -17 295 1 211 281 62 42 chr17 8236648 8236744 -81267809 - MIR SINE MIR -6 256 159 694 281 210 12 chr17 8236964 8237545 -81267008 + L2 LINE L2 1889 2584 -730 214 210 0 32 chr17 8238748 8238810 -81265743 + C-rich Low_complexity Low_complexity 6 65 0 1990 163 0 0 chr17 8239027 8239333 -81265220 - AluJb SINE Alu -6 306 1 578 303 101 0 chr17 8239365 8239583 -81264970 - MIR SINE MIR -20 242 3 211 341 0 31 chr17 8239876 8240005 -81264548 + C-rich Low_complexity Low_complexity 4 128 0 2074 99 59 6 chr17 8240564 8240819 -81263734 + MER2 DNA MER2_type 6 283 -62 2329 74 0 42 chr17 8240819 8241131 -81263422 - AluSx SINE Alu -11 301 3 2074 99 59 6 chr17 8241131 8241198 -81263355 + MER2 DNA MER2_type 283 345 0 1687 203 38 3 chr17 8241204 8241549 -81263004 - MER21B LTR ERV1 -60 803 447 464 77 15 0 chr17 8241550 8241615 -81262938 + AluS SINE Alu 2 67 -246 2279 105 0 38 chr17 8242017 8242331 -81262222 + AluSx SINE Alu 1 302 -10 518 160 0 75 chr17 8244121 8244227 -81260326 + FLAM_A SINE Alu 1 98 -44 1972 93 0 25 chr17 8244395 8244675 -81259878 - AluSx SINE Alu -39 273 1 22 0 0 0 chr17 8244675 8244697 -81259856 + AT_rich Low_complexity Low_complexity 1 22 0 826 187 0 13 chr17 8244989 8245162 -81259391 - AluSg/x SINE Alu 0 304 134 2258 104 0 3 chr17 8245488 8245795 -81258758 - AluSx SINE Alu -6 306 1 489 265 54 7 chr17 8245933 8246080 -81258473 + MIR SINE MIR 20 173 -89 1973 119 25 0 chr17 8246366 8246652 -81257901 + AluSx SINE Alu 6 298 -14 1079 145 36 54 chr17 8247533 8247754 -81256799 - AluJo SINE Alu -5 307 91 1955 106 65 14 chr17 8247767 8248060 -81256493 - AluSx SINE Alu -4 308 1 454 243 111 0 chr17 8248292 8248436 -81256117 + MIR SINE MIR 53 212 -50 321 294 45 51 chr17 8248519 8248603 -81255950 - L2 LINE L2 -177 3095 3012 2361 75 3 0 chr17 8248603 8248909 -81255644 - AluY SINE Alu -4 307 1 321 294 45 51 chr17 8248909 8249001 -81255552 - L2 LINE L2 -260 3012 2920 452 286 6 56 chr17 8249075 8249236 -81255317 - MIR SINE MIR -62 200 48 2158 85 0 42 chr17 8249255 8249426 -81255127 - AluSg SINE Alu -16 294 117 180 0 0 0 chr17 8249426 8249446 -81255107 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 2108 69 44 0 chr17 8249447 8249721 -81254832 - AluY SINE Alu -25 286 1 2158 85 0 42 chr17 8249721 8249854 -81254699 - AluSg SINE Alu -192 118 1 1917 161 0 3 chr17 8250727 8251037 -81253516 - AluSx SINE Alu -3 309 1 189 0 0 0 chr17 8251058 8251079 -81253474 + (T)n Simple_repeat Simple_repeat 1 21 0 1058 106 0 4 chr17 8251116 8251333 -81253220 - AluJb SINE Alu -10 302 2 2138 104 10 0 chr17 8251894 8252193 -81252360 + AluSx SINE Alu 1 302 -10 2072 83 0 0 chr17 8252449 8252715 -81251838 - AluSx SINE Alu -46 266 1 367 298 48 36 chr17 8252715 8252883 -81251670 - L1MC4a LINE L1 -1916 5892 5723 23 0 0 0 chr17 8252929 8252952 -81251601 + AT_rich Low_complexity Low_complexity 1 23 0 359 290 142 12 chr17 8252961 8253130 -81251423 - MIR3 SINE MIR -4 204 14 546 179 111 0 chr17 8253673 8253790 -81250763 - FLAM_C SINE Alu -9 134 5 277 121 0 35 chr17 8253799 8253857 -81250696 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 2070 134 0 3 chr17 8253857 8254170 -81250383 - AluJb SINE Alu 0 312 1 2090 109 0 0 chr17 8254182 8254494 -81250059 - AluSx SINE Alu 0 312 1 255 267 67 0 chr17 8254534 8254609 -81249944 + MER5B DNA MER1_type 61 140 -38 1742 211 58 3 chr17 8255283 8255629 -81248924 - MLT1A1 LTR MaLR 0 365 1 887 211 30 20 chr17 8257334 8257370 -81247183 + MER3 DNA MER1_type 9 43 -166 418 101 159 0 chr17 8257370 8257439 -81247114 - MADE1 DNA Mariner 0 80 1 887 211 30 20 chr17 8257439 8257601 -81246952 + MER3 DNA MER1_type 43 209 0 2350 141 19 8 chr17 8257667 8258028 -81246525 + MLT1A1 LTR MaLR 1 365 0 1846 134 35 0 chr17 8258723 8259006 -81245547 + AluSx SINE Alu 1 293 -19 328 160 140 0 chr17 8259018 8259118 -81245435 + Charlie5 DNA MER1_type 2423 2536 -76 1466 136 17 4 chr17 8259121 8259356 -81245197 + AluJb SINE Alu 1 238 -74 2099 107 3 0 chr17 8259456 8259746 -81244807 + AluSx SINE Alu 3 293 -19 876 152 0 0 chr17 8259758 8259890 -81244663 + FLAM_C SINE Alu 1 132 -1 225 179 0 104 chr17 8259913 8259980 -81244573 + Charlie8 DNA MER1_type 160 219 -2198 382 333 24 44 chr17 8260013 8260265 -81244288 - L2 LINE L2 -557 2757 2511 2335 81 0 0 chr17 8260629 8260926 -81243627 + AluSx SINE Alu 1 297 -15 181 360 140 18 chr17 8261488 8261602 -81242951 - L2 LINE L2 -5 3308 3181 1927 140 3 10 chr17 8261635 8261935 -81242618 + AluJb SINE Alu 1 298 -14 27 49 0 0 chr17 8262030 8262071 -81242482 + AT_rich Low_complexity Low_complexity 1 41 0 267 136 0 0 chr17 8262116 8262160 -81242393 + Tigger5 DNA MER2_type 15 58 -2265 * 1637 103 0 4 chr17 8262156 8262398 -81242155 + Tigger5 DNA MER2_type 2052 2292 -31 2452 62 0 7 chr17 8262441 8262750 -81241803 + AluY SINE Alu 1 307 -4 1776 115 4 4 chr17 8263649 8263909 -81240644 - AluSq SINE Alu -53 260 1 1792 146 28 0 chr17 8264266 8264553 -81240000 - AluJb SINE Alu -17 295 1 1503 177 89 0 chr17 8264736 8264903 -81239650 - AluJb SINE Alu -5 307 156 189 0 0 0 chr17 8264903 8264924 -81239629 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1503 177 89 0 chr17 8264924 8265038 -81239515 - AluJb SINE Alu -156 156 1 2202 85 13 3 chr17 8265097 8265402 -81239151 - AluSq SINE Alu -5 308 1 341 318 88 0 chr17 8265414 8265653 -81238900 - L1ME3A LINE L1 -295 5875 5677 1048 26 45 7 chr17 8267465 8267619 -81236934 + (TTTC)n Simple_repeat Simple_repeat 1 160 0 808 155 14 7 chr17 8267653 8267795 -81236758 - AluJo SINE Alu -169 143 1 454 220 10 10 chr17 8268677 8268777 -81235776 + MER96B DNA MER1_type? 1 100 -317 1811 135 0 0 chr17 8268780 8269047 -81235506 - AluSx SINE Alu -6 306 40 852 189 22 22 chr17 8269200 8269422 -81235131 - MER96B DNA MER1_type? -97 320 99 1635 154 0 4 chr17 8269422 8269681 -81234872 + AluJb SINE Alu 1 258 -54 313 70 35 0 chr17 8269682 8269739 -81234814 + (TA)n Simple_repeat Simple_repeat 2 60 0 1550 107 9 5 chr17 8269746 8269970 -81234583 + AluSp SINE Alu 1 225 -88 678 189 0 0 chr17 8270071 8270182 -81234371 - FLAM_C SINE Alu -32 111 1 198 0 0 0 chr17 8270203 8270225 -81234328 + (T)n Simple_repeat Simple_repeat 1 22 0 1090 101 0 4 chr17 8270261 8270478 -81234075 - AluJb SINE Alu -10 302 2 2360 87 0 3 chr17 8271187 8271497 -81233056 - AluSc SINE Alu 0 309 1 3607 172 33 57 chr17 8272020 8272061 -81232492 - L1MB5 LINE L1 0 6174 6134 2179 113 0 7 chr17 8272061 8272370 -81232183 - AluSx SINE Alu -5 307 1 3607 172 33 57 chr17 8272370 8273149 -81231404 - L1MB5 LINE L1 -40 6134 5374 3482 147 35 20 chr17 8273845 8274442 -81230111 - L1MA8 LINE L1 -6 6285 5680 2001 133 0 13 chr17 8274574 8274882 -81229671 - AluSx SINE Alu -8 304 1 469 317 70 10 chr17 8274889 8275088 -81229465 - L1MB5 LINE L1 -964 5182 4972 23 33 0 0 chr17 8275119 8275149 -81229404 + AT_rich Low_complexity Low_complexity 1 30 0 477 223 18 0 chr17 8275288 8275400 -81229153 + MIR SINE MIR 100 213 -49 805 247 60 40 chr17 8277026 8277286 -81227267 + MIR SINE MIR 2 261 -1 240 263 47 23 chr17 8277549 8277720 -81226833 + (CAGAGA)n Simple_repeat Simple_repeat 1 175 0 468 77 0 0 chr17 8282895 8282960 -81221593 + (CCA)n Simple_repeat Simple_repeat 2 66 0 219 69 0 0 chr17 8283450 8283479 -81221074 + (CAG)n Simple_repeat Simple_repeat 1 29 0 201 39 0 0 chr17 8285659 8285685 -81218868 + (CCCCG)n Simple_repeat Simple_repeat 3 28 0 234 241 0 60 chr17 8286098 8286181 -81218372 + C-rich Low_complexity Low_complexity 3 80 0 2169 97 3 7 chr17 8287791 8288090 -81216463 - AluSq SINE Alu -15 298 1 189 360 58 12 chr17 8288352 8288438 -81216115 - MIR SINE MIR -152 110 21 668 267 108 0 chr17 8290073 8290249 -81214304 + MER91A DNA MER1_type 2 196 0 1326 82 0 0 chr17 8290266 8290437 -81214116 - AluSq SINE Alu -7 306 136 2137 82 41 0 chr17 8290778 8291071 -81213482 + AluSg SINE Alu 1 305 -5 323 251 261 16 chr17 8291264 8291346 -81213207 + L1ME LINE L1 4390 4451 -1695 961 245 58 37 chr17 8291346 8291640 -81212913 + AluJo SINE Alu 1 300 -2 323 251 261 16 chr17 8291640 8291860 -81212693 + L1ME LINE L1 4451 4766 -1380 1281 189 66 4 chr17 8291876 8292135 -81212418 + AluJb SINE Alu 6 280 -32 216 0 0 0 chr17 8292136 8292160 -81212393 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1044 244 88 31 chr17 8292167 8292344 -81212209 + L1ME LINE L1 4773 4939 -1207 2158 123 0 0 chr17 8292344 8292654 -81211899 + AluSx SINE Alu 1 310 -2 1044 244 88 31 chr17 8292654 8292956 -81211597 + L1ME LINE L1 4939 5279 -867 232 267 19 29 chr17 8292946 8293051 -81211502 + L1ME LINE L1 5818 5921 -249 * 2327 82 3 3 chr17 8293250 8293556 -81210997 + AluSx SINE Alu 1 306 -6 1515 104 0 58 chr17 8293761 8294002 -81210551 + AluSx SINE Alu 1 227 -85 509 160 0 0 chr17 8294077 8294152 -81210401 - AluS SINE Alu -236 76 2 246 235 20 0 chr17 8294188 8294239 -81210314 - MLT1B LTR MaLR -295 95 44 656 198 28 55 chr17 8295019 8295201 -81209352 + MIR SINE MIR 86 262 0 269 118 20 0 chr17 8296708 8296759 -81207794 + CT-rich Low_complexity Low_complexity 1 52 0 2168 111 3 0 chr17 8296779 8297077 -81207476 - AluSq SINE Alu -14 299 1 847 242 102 79 chr17 8297301 8297772 -81206781 - L2 LINE L2 0 3313 2832 1889 107 0 18 chr17 8297819 8298099 -81206454 + AluJb SINE Alu 1 275 -37 748 259 151 45 chr17 8298120 8298498 -81206055 - L2 LINE L2 -1963 1351 934 2046 132 3 0 chr17 8299029 8299332 -81205221 - AluSq SINE Alu -9 304 1 279 263 50 12 chr17 8299371 8299451 -81205102 - L2 LINE L2 -15 3257 3175 198 327 156 34 chr17 8299777 8299982 -81204571 - L2 LINE L2 -639 2675 2446 839 170 0 0 chr17 8299982 8300123 -81204430 + FLAM_C SINE Alu 2 142 -1 189 390 84 0 chr17 8300123 8300277 -81204276 - L2 LINE L2 -851 2463 2297 412 198 31 0 chr17 8300281 8300377 -81204176 + MER5A DNA MER1_type 4 102 -87 290 278 93 0 chr17 8300450 8300558 -81203995 - L2 LINE L2 -1021 2293 2176 497 231 134 43 chr17 8303533 8303719 -81200834 + MIR SINE MIR 3 205 -57 818 135 8 15 chr17 8303990 8304123 -81200430 + AluJb SINE Alu 1 132 -180 497 308 0 15 chr17 8304319 8304589 -81199964 + (TG)n Simple_repeat Simple_repeat 1 265 0 665 97 11 0 chr17 8304976 8305069 -81199484 + AluSg SINE Alu 2 95 -215 231 324 15 93 chr17 8305108 8305220 -81199333 - HAL1 LINE L1 -13 2494 2404 1852 104 90 0 chr17 8305220 8305498 -81199055 - AluSp SINE Alu -10 303 1 231 324 15 93 chr17 8305498 8305589 -81198964 - HAL1 LINE L1 -103 2404 2307 487 305 107 47 chr17 8305613 8305846 -81198707 - L1MC5 LINE L1 -55 7906 7660 2251 97 0 0 chr17 8306165 8306464 -81198089 - AluSx SINE Alu -13 299 1 533 261 31 0 chr17 8306537 8306698 -81197855 - L1MC4a LINE L1 -1959 5849 5684 762 118 26 92 chr17 8306700 8306852 -81197701 + FLAM_C SINE Alu 2 143 0 1844 107 0 92 chr17 8307125 8307451 -81197102 - AluSq SINE Alu -17 296 1 881 191 0 0 chr17 8307451 8307603 -81196950 - FRAM SINE Alu -9 167 16 2310 88 3 7 chr17 8308022 8308330 -81196223 - AluSx SINE Alu -5 307 1 214 171 0 0 chr17 8308774 8308809 -81195744 + (CA)n Simple_repeat Simple_repeat 1 35 0 2133 124 0 3 chr17 8309453 8309760 -81194793 - AluSx SINE Alu -6 306 1 352 196 196 0 chr17 8311256 8311353 -81193200 + MIR SINE MIR 17 132 -130 413 309 32 16 chr17 8311394 8311517 -81193036 - L2 LINE L2 -6 3266 3142 305 192 88 16 chr17 8311762 8311810 -81192743 - L1MEd LINE L1 -3175 2954 2911 2292 68 0 29 chr17 8311810 8312118 -81192435 + AluSx SINE Alu 1 299 -13 305 192 88 16 chr17 8312118 8312194 -81192359 - L1MEd LINE L1 -3218 2911 2821 801 280 21 7 chr17 8312218 8312500 -81192053 - L1M4 LINE L1 -3531 2615 2330 884 226 55 115 chr17 8312501 8312649 -81191904 - L1MEd LINE L1 -3343 2786 2631 847 222 0 18 chr17 8312649 8312816 -81191737 - FRAM SINE Alu -2 164 1 884 226 55 115 chr17 8312816 8313291 -81191262 - L1MEd LINE L1 -3498 2631 2201 263 175 0 38 chr17 8313306 8313386 -81191167 - HAL1 LINE L1 -413 2094 2018 1362 186 91 11 chr17 8313387 8313672 -81190881 - AluJb SINE Alu -4 308 1 243 0 0 0 chr17 8313685 8313712 -81190841 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 752 275 82 42 chr17 8313721 8313836 -81190717 - HAL1 LINE L1 -481 2026 1917 2314 67 3 0 chr17 8313836 8314145 -81190408 + AluSp SINE Alu 1 310 0 752 275 82 42 chr17 8314145 8314359 -81190194 - HAL1 LINE L1 -590 1917 1683 832 183 35 6 chr17 8314359 8314528 -81190025 - AluJo SINE Alu -138 174 1 1445 279 79 47 chr17 8314534 8315309 -81189244 - L1MEd LINE L1 -5318 801 2 265 331 17 58 chr17 8315391 8315563 -81188990 - L2 LINE L2 -2299 1015 851 375 267 69 0 chr17 8315574 8315675 -81188878 - MIR SINE MIR -68 140 33 1981 142 0 10 chr17 8315710 8316020 -81188533 - AluJb SINE Alu -5 307 1 1875 103 0 0 chr17 8318344 8318597 -81185956 + AluSx SINE Alu 1 253 -59 198 0 0 0 chr17 8318599 8318621 -81185932 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 231 297 16 0 chr17 8319294 8319358 -81185195 + MER117 DNA MER1_type 5 69 -128 765 103 0 0 chr17 8320054 8320161 -81184392 - AluJo SINE Alu -1 311 205 961 95 0 47 chr17 8320168 8320316 -81184237 - AluJo SINE Alu -171 141 1 2143 128 0 0 chr17 8320722 8321028 -81183525 - AluSx SINE Alu -6 306 1 2375 83 3 6 chr17 8321493 8321807 -81182746 - AluSp SINE Alu 0 313 1 4229 137 51 48 chr17 8322712 8323181 -81181372 + MER44D DNA MER2_type 1 346 -2141 2297 104 0 0 chr17 8323181 8323488 -81181065 + AluSx SINE Alu 1 307 -5 4229 137 51 48 chr17 8323488 8323749 -81180804 + MER44D DNA MER2_type 346 605 0 185 377 132 9 chr17 8323992 8324106 -81180447 + MIR SINE MIR 16 143 -65 2019 112 3 3 chr17 8324137 8324458 -81180095 + AluSp SINE Alu 1 321 0 22 0 0 0 chr17 8324891 8324913 -81179640 + AT_rich Low_complexity Low_complexity 1 22 0 1902 134 10 0 chr17 8325195 8325485 -81179068 + AluSq SINE Alu 1 293 -20 22 0 0 0 chr17 8325485 8325507 -81179046 + AT_rich Low_complexity Low_complexity 1 22 0 201 175 0 0 chr17 8327020 8327060 -81177493 + (CAG)n Simple_repeat Simple_repeat 1 40 0 306 50 0 0 chr17 8327620 8327660 -81176893 + (CCA)n Simple_repeat Simple_repeat 2 41 0 226 253 0 36 chr17 8327678 8327761 -81176792 + C-rich Low_complexity Low_complexity 2 81 0 21 0 0 0 chr17 8332465 8332486 -81172067 + GC_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr17 8332743 8332778 -81171775 + AT_rich Low_complexity Low_complexity 1 35 0 31 0 0 0 chr17 8333487 8333518 -81171035 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 8333843 8333864 -81170689 + AT_rich Low_complexity Low_complexity 1 21 0 1429 140 23 45 chr17 8339226 8339491 -81165062 - AluJo SINE Alu -16 296 38 370 338 60 13 chr17 8339504 8339655 -81164898 - MIR SINE MIR -84 178 21 483 315 217 24 chr17 8340694 8341357 -81163196 + L2 LINE L2 2467 3267 -5 2194 101 0 13 chr17 8341536 8341852 -81162701 + AluSq SINE Alu 1 312 -1 1226 167 107 4 chr17 8343445 8343678 -81160875 - AluJo SINE Alu -55 257 1 463 142 206 77 chr17 8343678 8343703 -81160850 - Tigger4(Zombi) DNA MER2_type -186 2545 2525 1966 121 31 0 chr17 8343703 8343993 -81160560 + AluSx SINE Alu 1 299 -13 463 142 206 77 chr17 8343993 8344122 -81160431 - Tigger4(Zombi) DNA MER2_type -206 2525 1 470 237 42 9 chr17 8344266 8344399 -81160154 - MIR SINE MIR -62 200 65 387 197 0 0 chr17 8344479 8344540 -81160013 - MLT1G1 LTR MaLR -70 525 465 608 203 153 10 chr17 8344558 8344833 -81159720 - MLT1G1 LTR MaLR -194 348 3 406 237 119 17 chr17 8344978 8345096 -81159457 - L2 LINE L2 0 3272 3143 2347 43 0 68 chr17 8345165 8345488 -81159065 - AluY SINE Alu -10 301 1 2100 89 31 0 chr17 8345858 8346150 -81158403 - AluSg SINE Alu -7 303 3 314 296 113 0 chr17 8346334 8346449 -81158104 - L2 LINE L2 -7 3306 3179 194 250 100 0 chr17 8346647 8346707 -81157846 - MIR SINE MIR -187 75 10 779 331 218 22 chr17 8346741 8348093 -81156460 - L2 LINE L2 -1230 2084 469 2339 85 3 3 chr17 8348095 8348402 -81156151 + AluSq SINE Alu 1 307 -6 1712 160 3 3 chr17 8348405 8348712 -81155841 + AluJo SINE Alu 1 307 0 1627 151 11 14 chr17 8348835 8349120 -81155433 - AluJo SINE Alu -19 293 10 3201 135 56 4 chr17 8349146 8349702 -81154851 - L1MB7 LINE L1 -19 6165 5581 327 219 143 19 chr17 8350339 8350444 -81154109 - L1MC4a LINE L1 -1818 5990 5873 346 273 74 69 chr17 8350734 8350950 -81153603 - L1MC4a LINE L1 -1780 6028 5812 341 106 0 0 chr17 8350966 8351013 -81153540 - MER4E LTR ERV1 -69 710 664 510 313 30 20 chr17 8351038 8351239 -81153314 - L1MC4a LINE L1 -2032 5776 5574 370 344 46 7 chr17 8351366 8351517 -81153036 + MIR3 SINE MIR 16 172 -36 572 178 20 27 chr17 8351649 8351795 -81152758 - MER113 DNA MER1_type? -365 156 12 1873 93 0 15 chr17 8351957 8352226 -81152327 + AluSq SINE Alu 26 290 -23 24 53 0 0 chr17 8352227 8352265 -81152288 + AT_rich Low_complexity Low_complexity 1 38 0 351 178 48 27 chr17 8352408 8352554 -81151999 + (TA)n Simple_repeat Simple_repeat 2 150 0 32 0 0 0 chr17 8353173 8353205 -81151348 + AT_rich Low_complexity Low_complexity 1 32 0 253 186 29 29 chr17 8353493 8353563 -81150990 + GA-rich Low_complexity Low_complexity 2 71 0 245 307 18 18 chr17 8353693 8353885 -81150668 + GA-rich Low_complexity Low_complexity 1 192 0 348 309 24 18 chr17 8355316 8355481 -81149072 + (CAGG)n Simple_repeat Simple_repeat 2 167 0 244 306 8 32 chr17 8355457 8355581 -81148972 + GA-rich Low_complexity Low_complexity 6 126 0 * 234 0 0 0 chr17 8357564 8357590 -81146963 + (CA)n Simple_repeat Simple_repeat 2 27 0 381 43 0 0 chr17 8357941 8357988 -81146565 + (TA)n Simple_repeat Simple_repeat 1 47 0 360 0 0 0 chr17 8358190 8358230 -81146323 + (GGA)n Simple_repeat Simple_repeat 2 41 0 609 79 0 0 chr17 8358231 8358307 -81146246 + AluSp/q SINE Alu 155 230 -83 436 326 91 50 chr17 8358410 8358848 -81145705 + L2 LINE L2 1103 1558 -1756 530 297 110 78 chr17 8359526 8359870 -81144683 + L2 LINE L2 1598 1929 -1385 2192 103 0 0 chr17 8359870 8360172 -81144381 - AluSx SINE Alu -9 303 2 530 297 110 78 chr17 8360172 8360698 -81143855 + L2 LINE L2 1929 2496 -818 801 212 29 0 chr17 8360809 8360979 -81143574 - Charlie8 DNA MER1_type -2168 249 75 2507 40 0 0 chr17 8361114 8361410 -81143143 - AluY SINE Alu -15 296 1 318 280 89 78 chr17 8361442 8361643 -81142910 + L1M4 LINE L1 4214 4420 -1726 315 0 0 0 chr17 8361643 8361678 -81142875 + (TG)n Simple_repeat Simple_repeat 2 36 0 318 280 89 78 chr17 8361678 8361733 -81142820 + L1M4 LINE L1 4420 4473 -1673 806 203 7 13 chr17 8361733 8361886 -81142667 + AluJb SINE Alu 134 285 -27 267 31 0 0 chr17 8361886 8361918 -81142635 + (CA)n Simple_repeat Simple_repeat 2 33 0 759 293 150 49 chr17 8361926 8362414 -81142139 + L1M4 LINE L1 4519 5055 -1091 29 0 0 0 chr17 8362414 8362443 -81142110 + AT_rich Low_complexity Low_complexity 1 29 0 581 156 0 2 chr17 8362446 8362722 -81141831 + AluSx SINE Alu 1 327 0 265 221 15 0 chr17 8363159 8363227 -81141326 + HAL1 LINE L1 840 908 -1599 926 204 171 24 chr17 8363241 8363575 -81140978 + HAL1 LINE L1 1581 1963 -544 528 120 13 0 chr17 8363656 8363731 -81140822 + AluS SINE Alu 2 77 -236 254 131 475 0 chr17 8363731 8363822 -81140731 + AluSg/x SINE Alu 192 311 0 2182 88 0 7 chr17 8363829 8364124 -81140429 - AluSg SINE Alu -17 293 1 425 290 49 11 chr17 8364125 8364308 -81140245 + HAL1 LINE L1 2029 2218 -289 2378 83 3 0 chr17 8364500 8364812 -81139741 - AluSp SINE Alu 0 313 1 1758 158 3 3 chr17 8365043 8365346 -81139207 + AluJb SINE Alu 1 303 -9 383 242 25 50 chr17 8366408 8366569 -81137984 + L1MC4a LINE L1 5734 5890 -1918 694 112 103 26 chr17 8366574 8366690 -81137863 + FLAM_C SINE Alu 5 129 -4 2396 79 0 0 chr17 8366825 8367129 -81137424 - AluSq SINE Alu -4 309 6 335 272 97 61 chr17 8367827 8367941 -81136612 - MIR SINE MIR -122 140 23 1722 125 96 0 chr17 8368019 8368299 -81136254 - AluJo SINE Alu 0 312 6 1112 80 12 19 chr17 8368313 8368475 -81136078 - L1PA13 LINE L1 0 6163 6003 2240 99 0 0 chr17 8368544 8368846 -81135707 + AluSx SINE Alu 1 302 -10 1732 77 0 0 chr17 8369520 8369741 -81134812 - AluSg/x SINE Alu -5 305 85 345 221 77 10 chr17 8369858 8369962 -81134591 + L2 LINE L2 3199 3309 -4 1965 124 7 0 chr17 8370157 8370455 -81134098 - AluJb SINE Alu -12 300 1 2029 132 0 3 chr17 8371388 8371691 -81132862 - AluSx SINE Alu -10 302 1 2292 85 7 0 chr17 8371876 8372182 -81132371 + AluSp SINE Alu 1 308 -5 2314 70 0 3 chr17 8372182 8372633 -81131920 + AluY SINE Alu 1 451 0 798 292 29 0 chr17 8373511 8373720 -81130833 - MIR SINE MIR -20 242 28 2363 79 0 0 chr17 8374411 8374715 -81129838 - AluSx SINE Alu -8 304 1 2273 76 0 19 chr17 8375210 8375527 -81129026 + AluY SINE Alu 1 311 0 2216 109 0 0 chr17 8376836 8377139 -81127414 - AluSq SINE Alu -10 303 1 785 125 117 0 chr17 8377666 8377786 -81126767 + AluJo SINE Alu 3 136 -176 2298 86 0 0 chr17 8377786 8378090 -81126463 + AluSx SINE Alu 1 304 -8 1867 139 36 3 chr17 8378100 8378402 -81126151 + AluJb SINE Alu 1 312 0 2209 94 3 22 chr17 8378409 8378727 -81125826 + AluSx SINE Alu 1 312 0 2330 90 0 3 chr17 8380062 8380372 -81124181 + AluSg SINE Alu 1 309 -1 448 245 59 0 chr17 8380953 8381055 -81123498 + L2 LINE L2 3164 3271 -1 2278 105 0 0 chr17 8381380 8381686 -81122867 - AluSx SINE Alu -6 306 1 2379 83 0 0 chr17 8381792 8382092 -81122461 - AluSp SINE Alu -13 300 1 1186 213 102 18 chr17 8382126 8382567 -81121986 - HAL1b LINE L1 0 1348 871 324 206 140 37 chr17 8382571 8382664 -81121889 - L1MC4 LINE L1 -368 7674 7567 2121 113 0 10 chr17 8382664 8382677 -81121876 - AluSx SINE Alu -5 307 295 257 0 30 0 chr17 8382677 8382710 -81121843 + (TTTAA)n Simple_repeat Simple_repeat 2 35 0 2121 113 0 10 chr17 8382710 8383006 -81121547 - AluSx SINE Alu -17 295 1 324 206 140 37 chr17 8383006 8383019 -81121534 - L1MC4 LINE L1 -475 7567 7557 795 95 0 0 chr17 8383026 8383131 -81121422 - AluSg/x SINE Alu -18 291 187 448 256 7 29 chr17 8383131 8383268 -81121285 - L1MC4 LINE L1 -465 7577 7444 309 251 161 35 chr17 8383314 8383513 -81121040 - HAL1b LINE L1 -1055 293 70 2169 85 3 0 chr17 8384109 8384412 -81120141 + AluSp SINE Alu 1 304 0 719 177 0 8 chr17 8384432 8384562 -81119991 - FLAM_A SINE Alu -1 141 13 2077 124 0 0 chr17 8384825 8385124 -81119429 - AluJb SINE Alu -1 311 13 25 51 0 0 chr17 8385259 8385298 -81119255 + AT_rich Low_complexity Low_complexity 1 39 0 345 209 77 11 chr17 8385400 8385491 -81119062 - U6 snRNA snRNA -9 98 2 380 320 134 48 chr17 8385532 8386057 -81118496 + L2 LINE L2 2524 3182 -90 2330 81 0 13 chr17 8386057 8386367 -81118186 - AluSc SINE Alu -3 306 1 380 320 134 48 chr17 8386367 8386443 -81118110 + L2 LINE L2 3182 3250 -22 225 0 0 0 chr17 8386911 8386936 -81117617 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2195 98 3 0 chr17 8387236 8387531 -81117022 + AluSx SINE Alu 1 296 -16 2072 109 0 0 chr17 8387533 8387844 -81116709 + AluSx SINE Alu 1 311 0 314 239 26 71 chr17 8387971 8388084 -81116469 + L1MB5 LINE L1 5261 5368 -778 2020 97 0 58 chr17 8388090 8388398 -81116155 + AluSg SINE Alu 1 290 -20 2121 117 0 0 chr17 8388449 8388757 -81115796 + AluSx SINE Alu 1 308 -4 1976 140 0 3 chr17 8388796 8389096 -81115457 + AluSx SINE Alu 1 299 -13 2072 101 9 25 chr17 8389182 8389500 -81115053 - AluSq SINE Alu 0 313 1 2186 106 3 0 chr17 8390267 8390570 -81113983 + AluSx SINE Alu 1 304 -8 2370 77 0 6 chr17 8390570 8390882 -81113671 + AluY SINE Alu 1 311 0 1707 210 75 5 chr17 8390901 8391301 -81113252 + L1MB5 LINE L1 5593 6020 -154 756 169 7 0 chr17 8391376 8391512 -81113041 + L1MB7 LINE L1 6029 6165 -19 2022 110 3 23 chr17 8391534 8391844 -81112709 + AluSx SINE Alu 1 304 -8 2286 87 0 0 chr17 8392365 8392663 -81111890 + AluSx SINE Alu 1 298 -14 1144 141 0 0 chr17 8392665 8392842 -81111711 + AluSg/x SINE Alu 136 312 0 2257 102 0 3 chr17 8394410 8394713 -81109840 + AluSx SINE Alu 1 302 -10 222 347 7 20 chr17 8395850 8395997 -81108556 + C-rich Low_complexity Low_complexity 2 146 0 24 0 0 0 chr17 8396604 8396628 -81107925 + GC_rich Low_complexity Low_complexity 1 24 0 1762 89 155 4 chr17 8399348 8399619 -81104934 + AluSx SINE Alu 1 312 0 372 43 0 0 chr17 8399672 8399718 -81104835 + (CA)n Simple_repeat Simple_repeat 2 47 0 691 299 115 20 chr17 8400150 8400334 -81104219 + L2 LINE L2 2884 3049 -264 2021 94 0 14 chr17 8400334 8400657 -81103896 + AluSx SINE Alu 1 319 0 691 299 115 20 chr17 8400657 8400863 -81103690 + L2 LINE L2 3049 3312 -1 21 0 0 0 chr17 8402479 8402500 -81102053 + AT_rich Low_complexity Low_complexity 1 21 0 385 225 45 36 chr17 8407090 8407201 -81097352 - MIR SINE MIR -131 131 20 22 56 0 0 chr17 8408785 8408821 -81095732 + GC_rich Low_complexity Low_complexity 1 36 0 486 288 0 34 chr17 8409083 8409264 -81095289 - MIR3 SINE MIR -55 153 14 190 269 30 0 chr17 8411852 8411919 -81092634 + MIR SINE MIR 76 144 -118 1133 60 0 0 chr17 8412434 8412568 -81091985 + AluSx SINE Alu 1 134 -179 1969 129 14 0 chr17 8412570 8412864 -81091689 + AluSx SINE Alu 1 298 -14 1038 98 0 75 chr17 8413302 8413476 -81091077 - AluSx SINE Alu -151 161 1 1122 154 0 0 chr17 8413613 8413801 -81090752 + AluSx SINE Alu 122 309 -1 1826 148 20 3 chr17 8413806 8414110 -81090443 + AluJb SINE Alu 1 309 -3 796 66 0 16 chr17 8414299 8414421 -81090132 + (TA)n Simple_repeat Simple_repeat 2 121 0 2181 42 49 7 chr17 8415140 8415425 -81089128 + AluY SINE Alu 1 297 -14 785 317 94 42 chr17 8415428 8415562 -81088991 + L2 LINE L2 2740 2866 -447 2007 131 3 0 chr17 8415562 8415890 -81088663 - AluSx SINE Alu 0 329 1 1882 152 0 0 chr17 8415892 8416188 -81088365 - AluSx SINE Alu -16 296 1 785 317 94 42 chr17 8416188 8416563 -81087990 + L2 LINE L2 2866 3295 -18 2089 129 0 0 chr17 8416569 8416871 -81087682 + AluSx SINE Alu 1 302 -10 494 263 141 57 chr17 8418693 8418990 -81085563 - L2 LINE L2 -2 3311 2990 2622 221 97 40 chr17 8420849 8421083 -81083470 - L1ME2 LINE L1 0 6164 5945 2027 78 10 34 chr17 8421083 8421377 -81083176 + AluSq SINE Alu 5 291 -22 2622 221 97 40 chr17 8421377 8422365 -81082188 - L1ME2 LINE L1 -219 5945 4873 1663 161 37 3 chr17 8422415 8422713 -81081840 - AluJo SINE Alu -4 308 1 1548 235 46 100 chr17 8422759 8422819 -81081734 + L1M4 LINE L1 3554 3616 -2530 1927 129 23 3 chr17 8422819 8423121 -81081432 + AluSx SINE Alu 1 308 -4 1548 235 46 100 chr17 8423121 8423293 -81081260 + L1M4 LINE L1 3616 3796 -2350 2191 109 0 13 chr17 8423293 8423429 -81081124 + AluSx SINE Alu 1 137 -175 2214 83 14 0 chr17 8423429 8423719 -81080834 + AluSg SINE Alu 1 294 -16 2191 109 0 13 chr17 8423719 8423894 -81080659 + AluSx SINE Alu 137 308 -4 1548 235 46 100 chr17 8423894 8423953 -81080600 + L1M4 LINE L1 3796 3857 -2289 748 162 8 0 chr17 8423953 8424070 -81080483 + FLAM_C SINE Alu 1 118 -15 1548 235 46 100 chr17 8424070 8424308 -81080245 + L1M4 LINE L1 3857 4106 -2040 2297 73 6 19 chr17 8424308 8424622 -81079931 + AluY SINE Alu 2 311 0 1548 235 46 100 chr17 8424622 8424729 -81079824 + L1M4 LINE L1 4106 4217 -1929 2441 59 3 0 chr17 8424729 8425035 -81079518 + AluY SINE Alu 1 307 -4 1880 127 0 46 chr17 8425043 8425185 -81079368 + AluSq SINE Alu 6 153 -160 2295 78 3 3 chr17 8425185 8425481 -81079072 + AluSq SINE Alu 1 296 -17 1880 127 0 46 chr17 8425481 8425661 -81078892 + AluSq SINE Alu 153 313 0 1548 235 46 100 chr17 8425661 8425735 -81078818 + L1M4 LINE L1 4224 4300 -1846 1665 106 64 8 chr17 8425735 8425999 -81078554 + AluSq SINE Alu 1 279 -34 2026 106 19 44 chr17 8425999 8426318 -81078235 + AluSx SINE Alu 1 312 0 1548 235 46 100 chr17 8426318 8426395 -81078158 + L1M4 LINE L1 4298 4313 -1833 802 168 59 77 chr17 8426395 8426615 -81077938 + MER2 DNA MER2_type 2 217 -128 230 241 35 0 chr17 8427109 8427167 -81077386 - MIR SINE MIR -3 259 200 1871 131 14 3 chr17 8427194 8427528 -81077025 + AluSq SINE Alu 1 313 0 2303 80 13 0 chr17 8427590 8427891 -81076662 + AluSp SINE Alu 1 305 -8 979 162 47 21 chr17 8428004 8428053 -81076500 + AluJo SINE Alu 88 134 -174 2126 117 0 16 chr17 8428053 8428370 -81076183 + AluSx SINE Alu 1 312 0 979 162 47 21 chr17 8428370 8428536 -81076017 + AluJo SINE Alu 134 308 0 2040 125 6 0 chr17 8428543 8428854 -81075699 + AluSq SINE Alu 1 313 0 354 242 96 45 chr17 8428999 8429197 -81075356 - L2 LINE L2 -17 3296 3089 2086 118 3 0 chr17 8429568 8429864 -81074689 + AluSx SINE Alu 1 297 -15 206 268 134 45 chr17 8429865 8430044 -81074509 - L2 LINE L2 -1810 1504 1310 1895 143 0 16 chr17 8431087 8431394 -81073159 + AluJb SINE Alu 1 302 -10 186 283 33 54 chr17 8432016 8432108 -81072445 - MIR SINE MIR -70 192 103 2296 60 7 13 chr17 8432122 8432421 -81072132 + AluY SINE Alu 1 297 -14 722 108 15 54 chr17 8433511 8433641 -81070912 - MER47A DNA MER2_type 0 366 242 2113 98 0 47 chr17 8433641 8433958 -81070595 - AluSg SINE Alu -8 302 1 1121 179 28 14 chr17 8433970 8434188 -81070365 - AluJo SINE Alu -11 301 81 868 163 0 25 chr17 8434196 8434356 -81070197 - AluJb SINE Alu -24 288 133 236 53 26 0 chr17 8434356 8434394 -81070159 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2037 74 14 11 chr17 8434394 8434677 -81069876 - AluSx SINE Alu -28 284 1 1522 192 31 3 chr17 8434679 8434971 -81069582 - AluJo SINE Alu -12 300 1 923 116 0 26 chr17 8434971 8435126 -81069427 - MER47A DNA MER2_type -116 250 100 2271 80 7 0 chr17 8435187 8435486 -81069067 + AluSx SINE Alu 1 301 -11 735 176 0 24 chr17 8435489 8435614 -81068939 + FLAM_A SINE Alu 5 126 -7 2019 138 0 0 chr17 8435615 8435913 -81068640 + AluSx SINE Alu 1 298 -14 521 217 0 19 chr17 8435928 8436034 -81068519 - MER47A DNA MER2_type -259 107 4 2147 80 23 13 chr17 8436589 8436891 -81067662 + AluSp SINE Alu 1 305 -8 246 320 58 10 chr17 8437542 8437645 -81066908 + MIR SINE MIR 110 217 -45 1853 159 10 0 chr17 8437930 8438239 -81066314 - AluJb SINE Alu 0 312 1 25 0 0 0 chr17 8439513 8439538 -81065015 + AT_rich Low_complexity Low_complexity 1 25 0 810 213 23 74 chr17 8439538 8439754 -81064799 - L1MA9 LINE L1 -2 6310 6106 2119 113 3 0 chr17 8439917 8440219 -81064334 + AluSq SINE Alu 1 303 -10 238 258 118 21 chr17 8440325 8440418 -81064135 - L2 LINE L2 -3 3310 3209 1208 113 0 6 chr17 8440554 8440731 -81063822 + AluSg/x SINE Alu 135 310 0 537 134 0 72 chr17 8440872 8440969 -81063584 + AluJo/FLAM SINE Alu 22 111 -201 2428 75 0 0 chr17 8440970 8441277 -81063276 - AluY SINE Alu -4 307 1 36 77 0 0 chr17 8441292 8441370 -81063183 + AT_rich Low_complexity Low_complexity 1 78 0 1988 101 61 7 chr17 8441386 8441682 -81062871 - AluSx SINE Alu 0 312 1 324 272 57 57 chr17 8441682 8441840 -81062713 + L1M4 LINE L1 3820 3977 -2169 1938 122 7 7 chr17 8441909 8442204 -81062349 + AluSx SINE Alu 1 295 -17 703 241 41 20 chr17 8442204 8442304 -81062249 + AluJo SINE Alu 11 107 -205 921 16 24 0 chr17 8442304 8442427 -81062126 + (TAGA)n Simple_repeat Simple_repeat 1 126 0 2142 100 0 7 chr17 8442431 8442731 -81061822 + AluSc SINE Alu 1 298 -11 703 241 41 20 chr17 8442731 8442820 -81061733 + AluJo SINE Alu 109 209 -103 24 22 0 43 chr17 8442848 8442869 -81061684 + AT_rich Low_complexity Low_complexity 1 21 -23 2103 99 7 0 chr17 8442869 8443163 -81061390 + AluSg SINE Alu 1 296 -14 24 22 0 43 chr17 8443163 8443187 -81061366 + AT_rich Low_complexity Low_complexity 21 44 0 1999 123 0 3 chr17 8443212 8443528 -81061025 - AluSg SINE Alu 0 310 1 244 0 27 27 chr17 8443618 8443655 -81060898 + (TTATA)n Simple_repeat Simple_repeat 5 41 0 544 292 92 71 chr17 8443689 8443863 -81060690 + L1M4 LINE L1 4217 4386 -1760 2011 144 7 0 chr17 8443863 8444168 -81060385 + AluSx SINE Alu 1 307 -5 544 292 92 71 chr17 8444168 8444441 -81060112 + L1M4 LINE L1 4386 4673 -1473 2030 100 4 4 chr17 8444478 8444757 -81059796 + AluSc SINE Alu 1 279 -30 1728 108 8 4 chr17 8444770 8445029 -81059524 + AluSx SINE Alu 44 303 -9 1937 145 0 3 chr17 8445036 8445347 -81059206 + AluSx SINE Alu 1 310 -2 23 54 0 0 chr17 8445348 8445385 -81059168 + AT_rich Low_complexity Low_complexity 1 37 0 2102 107 13 13 chr17 8445450 8445760 -81058793 + AluSq SINE Alu 4 313 0 2308 102 0 9 chr17 8445947 8446262 -81058291 - AluSp SINE Alu -1 312 1 2001 142 0 3 chr17 8446266 8446575 -81057978 - AluSx SINE Alu -4 308 1 1992 147 0 0 chr17 8446683 8446982 -81057571 + AluSx SINE Alu 1 299 -13 2068 132 0 0 chr17 8447054 8447364 -81057189 + AluSx SINE Alu 1 310 -2 2160 105 10 3 chr17 8447762 8448066 -81056487 - AluSq SINE Alu -7 306 1 2241 75 3 23 chr17 8448112 8448417 -81056136 - AluSq SINE Alu -14 299 1 295 341 117 40 chr17 8448506 8448779 -81055774 + L2 LINE L2 3003 3296 -17 22 0 0 0 chr17 8449026 8449048 -81055505 + AT_rich Low_complexity Low_complexity 1 22 0 219 36 0 0 chr17 8449378 8449406 -81055147 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 2120 77 0 74 chr17 8449806 8450132 -81054421 + AluSp SINE Alu 1 302 -11 204 208 0 0 chr17 8450506 8450554 -81053999 + (TGGG)n Simple_repeat Simple_repeat 1 48 0 212 162 0 0 chr17 8451394 8451431 -81053122 + (TG)n Simple_repeat Simple_repeat 2 38 0 751 111 19 0 chr17 8452239 8452347 -81052206 + FLAM_A SINE Alu 22 131 -11 314 231 108 39 chr17 8456641 8456771 -81047782 - L2 LINE L2 -10 3262 3124 2167 105 0 13 chr17 8456795 8456929 -81047624 + AluSg SINE Alu 1 135 -175 2295 56 13 20 chr17 8456929 8457232 -81047321 + AluY SINE Alu 1 301 -10 2167 105 0 13 chr17 8457232 8457403 -81047150 + AluSg SINE Alu 135 302 -8 1909 101 10 68 chr17 8457413 8457721 -81046832 + AluSq SINE Alu 1 290 -23 198 0 0 0 chr17 8457731 8457753 -81046800 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 478 395 47 13 chr17 8457783 8458082 -81046471 - L2 LINE L2 -345 2969 2661 656 189 20 59 chr17 8458082 8458190 -81046363 - MER45 DNA AcHobo 0 1581 1479 1928 126 40 3 chr17 8458190 8458491 -81046062 - AluSx SINE Alu 0 312 1 656 189 20 59 chr17 8458491 8458535 -81046018 - MER45 DNA AcHobo -102 1479 1435 1875 143 0 27 chr17 8458535 8458836 -81045717 - AluSx SINE Alu -18 294 2 325 222 37 37 chr17 8458845 8458926 -81045627 - AluJ SINE Alu -102 200 120 2404 70 0 0 chr17 8458950 8459248 -81045305 - AluSg SINE Alu -12 298 1 643 140 28 9 chr17 8459291 8459398 -81045155 - AluJ SINE Alu -195 117 9 1347 199 41 8 chr17 8459398 8459664 -81044889 - MER45B DNA AcHobo -425 615 341 1018 143 82 152 chr17 8459664 8459979 -81044574 - AluJo SINE Alu -7 305 13 1158 211 97 100 chr17 8460050 8460401 -81044152 - MER45B DNA AcHobo -690 350 1 2064 134 3 0 chr17 8460561 8460859 -81043694 - AluSx SINE Alu -13 299 1 238 272 247 19 chr17 8460915 8460981 -81043572 - L2 LINE L2 -93 3220 3170 1917 128 11 0 chr17 8460981 8461305 -81043248 - AluSx SINE Alu 0 327 1 238 272 247 19 chr17 8461305 8461395 -81043158 - L2 LINE L2 -143 3170 3027 2019 120 13 0 chr17 8461395 8461695 -81042858 - AluSx SINE Alu -8 304 1 499 184 23 0 chr17 8461700 8461787 -81042766 - FRAM SINE Alu -17 159 71 1096 149 80 0 chr17 8462109 8462297 -81042256 + AluSx SINE Alu 1 203 -109 520 82 27 0 chr17 8462297 8462370 -81042183 + AluSq/x SINE Alu 69 143 -169 1782 117 68 7 chr17 8462370 8462651 -81041902 + AluSg SINE Alu 1 298 -12 2246 88 3 0 chr17 8462651 8462945 -81041608 + AluSp SINE Alu 1 297 -16 2051 65 79 0 chr17 8462946 8463223 -81041330 + AluY SINE Alu 1 299 -12 1877 96 40 63 chr17 8463226 8463317 -81041236 + AluSx SINE Alu 1 93 -219 2290 81 7 0 chr17 8463317 8463626 -81040927 + AluSp SINE Alu 2 312 -1 1877 96 40 63 chr17 8463626 8463836 -81040717 + AluSx SINE Alu 93 295 -17 7059 110 177 90 chr17 8464512 8466072 -81038481 - pTR5 LTR ERV1 0 2438 743 866 139 0 13 chr17 8466205 8466363 -81038190 + L1MB3 LINE L1 5987 6142 -41 893 112 0 0 chr17 8466364 8466489 -81038064 + AluSg/x SINE Alu 173 297 -13 633 128 128 9 chr17 8466501 8466610 -81037943 + AluJb SINE Alu 3 124 -188 365 109 0 47 chr17 8466610 8466622 -81037931 + L1MB2 LINE L1 6111 6122 -49 1866 164 0 10 chr17 8466622 8466757 -81037796 + AluSx SINE Alu 1 136 -176 2069 77 60 0 chr17 8466757 8467042 -81037511 + AluSx SINE Alu 1 302 -10 1866 164 0 10 chr17 8467042 8467205 -81037348 + AluSx SINE Alu 136 296 -16 365 109 0 47 chr17 8467205 8467256 -81037297 + L1MB2 LINE L1 6122 6171 0 901 193 0 23 chr17 8467299 8467475 -81037078 + AluJo SINE Alu 1 172 -140 212 169 34 51 chr17 8467522 8467557 -81036996 + A-rich Low_complexity Low_complexity 2 36 -23 2077 127 3 3 chr17 8467557 8467856 -81036697 + AluSx SINE Alu 1 299 -13 2216 116 0 0 chr17 8467856 8468166 -81036387 + AluY SINE Alu 1 310 -1 212 169 34 51 chr17 8468166 8468188 -81036365 + A-rich Low_complexity Low_complexity 34 59 0 445 282 65 24 chr17 8468445 8468615 -81035938 - MIR SINE MIR -12 250 74 2095 128 0 3 chr17 8468621 8468934 -81035619 - AluSx SINE Alu 0 312 1 2226 116 0 0 chr17 8469048 8469350 -81035203 + AluSx SINE Alu 1 302 -10 2154 122 0 0 chr17 8469350 8469646 -81034907 + AluSx SINE Alu 1 296 -16 2304 78 0 0 chr17 8469646 8469942 -81034611 + AluY SINE Alu 1 296 -15 457 272 117 31 chr17 8470496 8470753 -81033800 + L2 LINE L2 2951 3229 -84 1402 61 4 2 chr17 8470755 8471019 -81033534 - AluY SINE Alu 0 311 2 335 243 0 0 chr17 8471019 8471089 -81033464 + L2 LINE L2 3179 3248 -24 2203 98 0 10 chr17 8471470 8471790 -81032763 - AluSx SINE Alu 0 312 1 2321 69 0 10 chr17 8472497 8472803 -81031750 + AluSq SINE Alu 1 303 -10 513 308 68 43 chr17 8472807 8472869 -81031684 + L2 LINE L2 3028 3087 -226 2447 64 0 3 chr17 8472869 8473181 -81031372 - AluY SINE Alu 0 311 1 513 308 68 43 chr17 8473181 8473397 -81031156 + L2 LINE L2 3087 3313 0 1566 164 27 7 chr17 8474324 8474622 -81029931 - AluJo SINE Alu -8 304 1 241 287 37 28 chr17 8475728 8475836 -81028717 + MIR SINE MIR 99 207 -55 195 129 0 0 chr17 8476550 8476581 -81027972 + (CAG)n Simple_repeat Simple_repeat 3 33 0 531 213 66 29 chr17 8477042 8477178 -81027375 + MIR SINE MIR 74 214 -48 369 0 0 0 chr17 8477370 8477411 -81027142 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 1747 140 0 18 chr17 8477411 8477696 -81026857 - AluSx SINE Alu -32 280 1 2242 100 0 0 chr17 8477708 8478009 -81026544 - AluSq SINE Alu -8 305 5 992 136 0 30 chr17 8478026 8478041 -81026512 + AluSg/x SINE Alu 122 136 -180 2140 112 3 10 chr17 8478041 8478355 -81026198 + AluSx SINE Alu 1 312 0 992 136 0 30 chr17 8478355 8478539 -81026014 + AluSg/x SINE Alu 136 316 0 2002 107 40 0 chr17 8480567 8480865 -81023688 - AluSg SINE Alu 0 310 1 2001 114 3 29 chr17 8480870 8481178 -81023375 - AluSq SINE Alu -13 300 1 2309 88 3 0 chr17 8481183 8481490 -81023063 - AluY SINE Alu -3 308 1 2264 98 3 0 chr17 8481538 8481843 -81022710 + AluSq SINE Alu 1 306 -7 1405 174 10 30 chr17 8481843 8482147 -81022406 + AluJb SINE Alu 15 312 0 * 1410 179 0 39 chr17 8482146 8482247 -81022306 + AluJb SINE Alu 27 130 -182 1972 122 28 0 chr17 8482247 8482535 -81022018 + AluSx SINE Alu 1 296 -16 1995 123 19 10 chr17 8482536 8482844 -81021709 + AluSx SINE Alu 1 311 -1 1410 179 0 39 chr17 8482844 8483025 -81021528 + AluJb SINE Alu 129 300 -12 1587 191 3 7 chr17 8483027 8483320 -81021233 + AluJb SINE Alu 1 292 -20 2060 112 10 0 chr17 8483380 8483676 -81020877 - AluSp SINE Alu -14 299 1 2244 81 0 26 chr17 8483730 8484039 -81020514 - AluY SINE Alu -10 301 1 2287 90 0 0 chr17 8484214 8484513 -81020040 + AluSx SINE Alu 1 299 -13 2218 91 0 26 chr17 8484642 8484949 -81019604 + AluSx SINE Alu 1 299 -13 32 26 0 0 chr17 8485102 8485141 -81019412 + AT_rich Low_complexity Low_complexity 1 39 0 2235 93 0 19 chr17 8485162 8485472 -81019081 - AluSx SINE Alu -8 304 1 572 122 0 0 chr17 8485474 8485556 -81018997 - AluSq/x SINE Alu -176 136 55 370 191 44 0 chr17 8485580 8485648 -81018905 - tRNA-Ile-ATT tRNA tRNA -5 72 2 1647 148 3 66 chr17 8485663 8485858 -81018695 - AluJo SINE Alu -1 311 105 1942 156 0 0 chr17 8485858 8486160 -81018393 + AluSq SINE Alu 3 304 -9 2066 123 0 13 chr17 8486168 8486477 -81018076 + AluSx SINE Alu 3 307 -5 1647 148 3 66 chr17 8486477 8486604 -81017949 - AluJo SINE Alu -214 98 1 812 231 0 0 chr17 8486682 8486842 -81017711 - FRAM SINE Alu -16 160 1 243 182 0 0 chr17 8486853 8486897 -81017656 + Alu SINE Alu 211 254 -48 1547 246 110 35 chr17 8486995 8487053 -81017500 - HAL1 LINE L1 -260 2247 2195 2188 92 7 16 chr17 8487053 8487356 -81017197 - AluSq SINE Alu -8 305 6 1547 246 110 35 chr17 8487356 8487381 -81017172 - HAL1 LINE L1 -312 2195 2173 2260 98 3 0 chr17 8487381 8487678 -81016875 - AluSp SINE Alu -15 298 1 1547 246 110 35 chr17 8487678 8488180 -81016373 - HAL1 LINE L1 -334 2173 1609 1799 136 0 106 chr17 8488180 8488510 -81016043 + AluSx SINE Alu 1 295 -7 1547 246 110 35 chr17 8488510 8488551 -81016002 - HAL1 LINE L1 -898 1609 1572 2095 111 0 14 chr17 8488553 8488850 -81015703 - AluSx SINE Alu -19 293 1 831 170 0 0 chr17 8488850 8488985 -81015568 - AluJb SINE Alu -177 135 1 295 246 0 56 chr17 8489011 8489153 -81015400 - HAL1 LINE L1 -1214 1293 1160 2075 97 32 32 chr17 8489155 8489466 -81015087 - AluSx SINE Alu -1 311 1 35 0 0 0 chr17 8489474 8489509 -81015044 + AT_rich Low_complexity Low_complexity 1 35 0 2162 113 0 3 chr17 8489822 8490131 -81014422 - AluSg SINE Alu -2 308 1 2202 71 0 55 chr17 8490135 8490461 -81014092 - AluY SINE Alu -3 308 1 1602 121 16 52 chr17 8490462 8490767 -81013786 - AluSc SINE Alu -15 294 1 824 116 31 0 chr17 8490767 8490896 -81013657 - AluJb SINE Alu -176 136 4 2002 76 3 99 chr17 8490926 8491268 -81013285 - AluSx SINE Alu -3 309 1 200 208 19 19 chr17 8491895 8491948 -81012605 + (CGG)n Simple_repeat Simple_repeat 2 54 0 188 197 0 16 chr17 8491961 8492022 -81012531 + (CGG)n Simple_repeat Simple_repeat 2 61 0 27 49 0 0 chr17 8492049 8492090 -81012463 + GC_rich Low_complexity Low_complexity 1 41 0 26 50 0 0 chr17 8492108 8492148 -81012405 + GC_rich Low_complexity Low_complexity 1 40 0 2483 52 0 3 chr17 8493764 8494072 -81010481 - AluY SINE Alu -4 307 1 2130 124 0 0 chr17 8495090 8495397 -81009156 - AluSx SINE Alu -1 311 5 257 260 14 0 chr17 8495529 8495602 -81008951 - U13 snRNA snRNA -26 78 5 994 162 9 90 chr17 8496617 8496742 -81007811 - AluSx SINE Alu -87 225 124 1032 156 0 0 chr17 8496742 8496922 -81007631 + (TA)n Simple_repeat Simple_repeat 1 180 0 994 162 9 90 chr17 8496922 8497018 -81007535 - AluSx SINE Alu -188 124 22 1178 186 0 9 chr17 8497646 8497866 -81006687 - AluJb SINE Alu 0 312 95 542 232 27 21 chr17 8497880 8498058 -81006495 - L1MA10 LINE L1 0 6334 5998 1465 177 9 78 chr17 8498141 8498475 -81006078 - AluSx SINE Alu -1 311 1 244 148 93 0 chr17 8498476 8498530 -81006023 + L1M4 LINE L1 4889 4947 -1199 836 158 8 0 chr17 8498533 8498660 -81005893 + FLAM_C SINE Alu 2 129 -14 23 0 0 0 chr17 8498660 8498683 -81005870 + AT_rich Low_complexity Low_complexity 1 23 0 639 194 8 97 chr17 8498683 8498696 -81005857 + L1M4 LINE L1 4942 4955 -1191 2031 106 16 19 chr17 8498696 8499008 -81005545 + AluSp SINE Alu 1 311 -2 639 194 8 97 chr17 8499008 8499060 -81005493 + L1M4 LINE L1 4955 5010 -1136 2000 118 7 3 chr17 8499060 8499349 -81005204 + AluSx SINE Alu 1 290 -22 639 194 8 97 chr17 8499349 8499438 -81005115 + L1M4 LINE L1 5010 5070 -1076 2297 103 3 0 chr17 8499438 8499750 -81004803 - AluSq SINE Alu 0 313 1 639 194 8 97 chr17 8499750 8499841 -81004712 + L1M4 LINE L1 5070 5167 -979 2011 128 3 0 chr17 8501389 8501700 -81002853 - AluSx SINE Alu 0 312 1 2296 92 0 3 chr17 8501764 8502067 -81002486 + AluSq SINE Alu 1 302 -11 2006 120 17 0 chr17 8502082 8502373 -81002180 - AluSx SINE Alu -16 296 1 827 193 73 73 chr17 8502421 8502639 -81001914 - AluJo SINE Alu -94 218 1 2448 80 3 0 chr17 8503229 8503541 -81001012 - AluSp SINE Alu 0 313 1 846 170 0 15 chr17 8503587 8503722 -81000831 - FLAM_C SINE Alu 0 133 1 2267 74 0 42 chr17 8504038 8504206 -81000347 - AluSg SINE Alu -11 299 148 2249 78 0 14 chr17 8504206 8504502 -81000051 - AluSg SINE Alu -17 293 2 2267 74 0 42 chr17 8504502 8504645 -80999908 - AluSg SINE Alu -162 148 1 2190 105 0 0 chr17 8504846 8505140 -80999413 - AluSc SINE Alu -15 294 1 2144 110 3 0 chr17 8505588 8505889 -80998664 - AluSx SINE Alu -10 302 1 2008 132 0 0 chr17 8505895 8506183 -80998370 - AluSg SINE Alu -22 288 1 473 203 0 0 chr17 8506184 8506263 -80998290 - AluJ/FLAM SINE Alu -225 87 9 1749 116 53 32 chr17 8506298 8506582 -80997971 + AluSp SINE Alu 5 294 -19 2335 71 0 3 chr17 8506588 8506883 -80997670 + AluSq SINE Alu 1 294 -19 2046 125 13 3 chr17 8506888 8507192 -80997361 - AluSx SINE Alu -5 307 1 1735 177 3 25 chr17 8507456 8507635 -80996918 - AluSx SINE Alu -2 310 139 1751 146 38 0 chr17 8507635 8507923 -80996630 - AluSx SINE Alu -13 299 1 1735 177 3 25 chr17 8507923 8508060 -80996493 - AluSx SINE Alu -173 139 1 587 141 0 0 chr17 8508063 8508155 -80996398 - AluSg/x SINE Alu -4 306 215 418 297 195 31 chr17 8508155 8508302 -80996251 - L2 LINE L2 -430 2884 2762 2206 59 0 17 chr17 8508302 8508618 -80995935 - AluY SINE Alu 0 311 1 418 297 195 31 chr17 8508618 8508792 -80995761 - L2 LINE L2 -552 2762 2509 781 190 27 15 chr17 8508801 8509078 -80995475 + MER21B LTR ERV1 1 316 -547 604 110 26 3 chr17 8509078 8509308 -80995245 + AluSx SINE Alu 1 305 -4 2020 122 3 0 chr17 8509680 8509966 -80994587 - AluSc SINE Alu -22 287 1 207 252 89 98 chr17 8510135 8510258 -80994295 - MIR SINE MIR -64 144 23 2216 101 0 0 chr17 8510329 8510627 -80993926 + AluSx SINE Alu 1 298 -14 1284 148 110 76 chr17 8511041 8511331 -80993222 + AluJb SINE Alu 3 302 0 639 184 54 101 chr17 8511337 8511505 -80993048 + FRAM SINE Alu 2 161 -5 547 236 36 0 chr17 8511506 8511616 -80992937 - AluJo/FLAM SINE Alu -197 115 2 1574 148 3 96 chr17 8511642 8511986 -80992567 - AluSx SINE Alu 0 312 1 2252 72 24 0 chr17 8520332 8520622 -80983931 - AluSq SINE Alu -16 297 1 2115 124 0 3 chr17 8521234 8521532 -80983021 - AluSx SINE Alu -15 297 1 2382 71 0 3 chr17 8521768 8522076 -80982477 - AluSq SINE Alu -6 307 1 1839 77 26 89 chr17 8524832 8525145 -80979408 - AluSx SINE Alu -19 293 1 202 203 25 25 chr17 8526771 8526850 -80977703 + (TGG)n Simple_repeat Simple_repeat 1 79 0 551 133 88 0 chr17 8529954 8530067 -80974486 - AluSq/x SINE Alu -190 123 1 716 329 94 13 chr17 8530073 8530447 -80974106 - L2 LINE L2 -18 3295 2892 1995 128 7 3 chr17 8530447 8530752 -80973801 + AluSx SINE Alu 1 306 -6 311 329 111 4 chr17 8530762 8530848 -80973705 + L2 LINE L2 1826 1901 -1413 2294 50 43 7 chr17 8530848 8531148 -80973405 - AluY SINE Alu 0 311 1 311 329 111 4 chr17 8531148 8531295 -80973258 + L2 LINE L2 1901 2084 -1230 285 286 0 0 chr17 8531366 8531429 -80973124 - L2 LINE L2 -2069 1245 1183 490 221 21 97 chr17 8531449 8531544 -80973009 + MIR SINE MIR 122 204 -58 2179 107 7 3 chr17 8531544 8531852 -80972701 + AluSx SINE Alu 1 309 -3 490 221 21 97 chr17 8531852 8531901 -80972652 + MIR SINE MIR 204 255 -7 203 288 25 25 chr17 8531964 8532044 -80972509 - L2 LINE L2 -2227 1087 1008 1091 80 7 20 chr17 8532108 8532258 -80972295 + AluSq/x SINE Alu 1 148 -164 27 49 0 0 chr17 8532268 8532309 -80972244 + AT_rich Low_complexity Low_complexity 1 41 0 2038 121 13 19 chr17 8532333 8532647 -80971906 - AluSx SINE Alu 0 312 1 827 193 73 73 chr17 8532695 8532913 -80971640 - AluJo SINE Alu -94 218 1 2448 80 3 0 chr17 8533503 8533815 -80970738 - AluSp SINE Alu 0 313 1 846 170 0 15 chr17 8533861 8533996 -80970557 - FLAM_C SINE Alu 0 133 1 2267 74 0 42 chr17 8534312 8534480 -80970073 - AluSg SINE Alu -11 299 148 2263 74 0 14 chr17 8534480 8534776 -80969777 - AluSg SINE Alu -17 293 2 2267 74 0 42 chr17 8534776 8534919 -80969634 - AluSg SINE Alu -162 148 1 2054 131 0 3 chr17 8535120 8535418 -80969135 - AluSx SINE Alu -15 297 1 1735 177 3 25 chr17 8535682 8535861 -80968692 - AluSx SINE Alu -2 310 139 1742 146 38 0 chr17 8535861 8536148 -80968405 - AluSx SINE Alu -14 298 1 1735 177 3 25 chr17 8536148 8536285 -80968268 - AluSx SINE Alu -173 139 1 587 141 0 0 chr17 8536288 8536380 -80968173 - AluSg/x SINE Alu -4 305 214 418 297 195 31 chr17 8536380 8536527 -80968026 - L2 LINE L2 -430 2884 2762 2206 59 0 17 chr17 8536527 8536843 -80967710 - AluY SINE Alu 0 311 1 418 297 195 31 chr17 8536843 8537017 -80967536 - L2 LINE L2 -552 2762 2509 781 190 27 15 chr17 8537026 8537303 -80967250 + MER21B LTR ERV1 1 316 -547 604 110 26 3 chr17 8537303 8537533 -80967020 + AluSx SINE Alu 1 308 -4 2020 122 3 0 chr17 8537905 8538191 -80966362 - AluSc SINE Alu -22 287 1 207 252 89 98 chr17 8538360 8538483 -80966070 - MIR SINE MIR -64 144 23 2216 101 0 0 chr17 8538554 8538852 -80965701 + AluSx SINE Alu 1 298 -14 1284 148 110 76 chr17 8539266 8539556 -80964997 + AluJb SINE Alu 3 302 0 639 184 54 101 chr17 8539562 8539730 -80964823 + FRAM SINE Alu 2 161 -5 547 236 36 0 chr17 8539731 8539841 -80964712 - AluJo/FLAM SINE Alu -197 115 2 1559 151 3 96 chr17 8539867 8540211 -80964342 - AluSx SINE Alu 0 312 1 227 189 0 0 chr17 8540740 8540793 -80963760 + GA-rich Low_complexity Low_complexity 1 53 0 396 71 0 0 chr17 8540864 8540920 -80963633 + (CCG)n Simple_repeat Simple_repeat 2 57 0 240 35 0 0 chr17 8541146 8541175 -80963378 + (CCG)n Simple_repeat Simple_repeat 2 30 0 2103 99 21 14 chr17 8746791 8747073 -80757480 + AluSx SINE Alu 18 301 -11 2248 132 13 0 chr17 8747073 8747376 -80757177 + AluSx SINE Alu 1 307 -5 196 283 67 0 chr17 8747420 8747480 -80757073 - L2 LINE L2 -8 3305 3242 632 124 10 0 chr17 8747483 8747580 -80756973 + MER4A LTR ERV1 1 98 -566 310 47 23 0 chr17 8747576 8747619 -80756934 + MER4A LTR ERV1 257 300 -364 * 2326 84 0 3 chr17 8747625 8747911 -80756642 + AluSc SINE Alu 5 289 -20 2080 152 0 3 chr17 8748710 8749019 -80755534 - AluSx SINE Alu -4 308 1 714 181 0 8 chr17 8749217 8749344 -80755209 + FLAM_C SINE Alu 1 126 -17 255 245 137 50 chr17 8749480 8749619 -80754934 + MLT1K LTR MaLR 327 477 -111 946 195 0 6 chr17 8749619 8749812 -80754741 - AluSg/x SINE Alu 0 310 132 2236 131 0 0 chr17 8749812 8750117 -80754436 - AluSx SINE Alu -7 305 1 298 268 41 0 chr17 8750117 8750214 -80754339 + MLT1K LTR MaLR 488 588 0 2504 85 0 0 chr17 8750465 8750772 -80753781 + AluSq SINE Alu 1 307 -6 418 224 51 0 chr17 8751014 8751112 -80753441 - MIR SINE MIR -132 130 28 2186 134 0 0 chr17 8751195 8751494 -80753059 - AluSx SINE Alu -11 301 3 189 181 14 42 chr17 8751604 8751676 -80752877 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 265 134 0 149 chr17 8752058 8752078 -80752475 + MER58 DNA MER1_type 2364 2385 -35 2073 89 12 77 chr17 8752078 8752405 -80752148 - AluSg SINE Alu -4 306 1 265 134 0 149 chr17 8752405 8752451 -80752102 + MER58 DNA MER1_type 2385 2420 0 277 183 54 43 chr17 8752702 8752795 -80751758 - HAL1 LINE L1 -354 2153 2060 363 175 9 85 chr17 8752871 8752967 -80751586 + AluJ/FLAM SINE Alu 1 75 -227 1042 102 88 0 chr17 8752975 8753122 -80751431 + FRAM SINE Alu 1 40 0 225 270 24 40 chr17 8753317 8753443 -80751110 - L1ME3A LINE L1 -218 5952 5829 2356 91 0 7 chr17 8753486 8753793 -80750760 + AluSg SINE Alu 1 305 -5 2413 53 57 0 chr17 8753945 8754228 -80750325 + AluY SINE Alu 1 299 -12 450 324 95 0 chr17 8754730 8754909 -80749644 - MIR SINE MIR -4 258 63 2107 128 7 16 chr17 8754909 8755214 -80749339 + AluSq SINE Alu 1 302 -11 201 39 0 0 chr17 8755324 8755350 -80749203 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 206 213 0 43 chr17 8755423 8755470 -80749083 + A-rich Low_complexity Low_complexity 5 49 0 984 182 56 5 chr17 8755686 8755884 -80748669 - MSTB1 LTR MaLR 0 432 225 617 226 74 51 chr17 8756192 8756409 -80748144 + LTR45 LTR ERV1 304 525 0 852 134 78 66 chr17 8756409 8756614 -80747939 - MSTB1 LTR MaLR -229 203 3 316 211 0 0 chr17 8756864 8756921 -80747632 - AluS SINE Alu -239 62 6 258 159 16 32 chr17 8756924 8756987 -80747566 + MLT1J LTR MaLR 441 502 -9 2401 102 0 0 chr17 8757273 8757568 -80746985 - AluSx SINE Alu -17 295 1 1264 150 40 0 chr17 8758154 8758319 -80746234 - AluSg/x SINE Alu -20 292 116 195 69 0 0 chr17 8758319 8758348 -80746205 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 1264 150 40 0 chr17 8758348 8758382 -80746171 - AluSg/x SINE Alu -196 116 85 1021 98 15 0 chr17 8758397 8758529 -80746024 - AluSg SINE Alu -176 134 1 507 257 47 34 chr17 8758533 8758681 -80745872 + L2 LINE L2 3164 3313 0 2292 93 0 3 chr17 8758906 8759197 -80745356 - AluSc SINE Alu -19 290 1 440 283 132 54 chr17 8760000 8760258 -80744295 - L2 LINE L2 -77 3195 2918 791 282 121 62 chr17 8760314 8760614 -80743939 - L2 LINE L2 -487 2827 2546 2262 103 0 0 chr17 8760614 8760895 -80743658 + AluSg SINE Alu 1 281 -29 791 282 121 62 chr17 8760895 8761175 -80743378 - L2 LINE L2 -768 2546 2213 1957 98 38 72 chr17 8761484 8761802 -80742751 + AluSp SINE Alu 1 307 -6 1187 194 166 43 chr17 8761941 8762274 -80742279 + LTR47A LTR ERVL 2 391 -61 2163 99 24 10 chr17 8762274 8762567 -80741986 - AluSx SINE Alu -6 306 10 1187 194 166 43 chr17 8762567 8762624 -80741929 + LTR47A LTR ERVL 391 440 -12 2280 89 31 0 chr17 8763248 8763539 -80741014 - AluSg SINE Alu 0 310 11 727 249 23 73 chr17 8763721 8763982 -80740571 - MER21B LTR ERV1 -151 712 465 1043 112 0 0 chr17 8763992 8764126 -80740427 + AluSq/x SINE Alu 3 136 -177 2588 74 3 0 chr17 8764126 8764438 -80740115 + AluSp SINE Alu 1 313 0 434 72 58 0 chr17 8764459 8764528 -80740025 + Alu SINE Alu 232 304 -8 2413 86 0 3 chr17 8764528 8764829 -80739724 + AluY SINE Alu 1 300 -11 1807 152 29 11 chr17 8764829 8765106 -80739447 - AluJo SINE Alu -30 282 1 229 315 14 0 chr17 8765192 8765265 -80739288 - L2 LINE L2 -41 3231 3158 294 290 14 103 chr17 8765348 8765512 -80739041 - L2 LINE L2 -261 3011 2869 2361 80 3 3 chr17 8765512 8765811 -80738742 + AluSx SINE Alu 1 299 -13 294 290 14 103 chr17 8765811 8765860 -80738693 - L2 LINE L2 -403 2869 2817 319 78 0 0 chr17 8766239 8766290 -80738263 - AluSp/q SINE Alu 0 303 253 977 122 27 0 chr17 8766296 8766443 -80738110 - AluJb SINE Alu -26 286 136 1835 157 17 7 chr17 8766444 8766743 -80737810 - AluJb SINE Alu -10 302 1 829 244 53 8 chr17 8766744 8767006 -80737547 + Charlie4a DNA MER1_type 78 351 -157 1825 176 0 23 chr17 8767008 8767315 -80737238 - AluSx SINE Alu -12 300 1 871 187 33 0 chr17 8767318 8767468 -80737085 + AluJb SINE Alu 156 310 -2 312 266 0 0 chr17 8767468 8767547 -80737006 + Charlie4a DNA MER1_type 430 508 0 1081 83 0 0 chr17 8768726 8768859 -80735694 - AluSq/x SINE Alu -179 133 1 193 88 29 0 chr17 8768868 8768902 -80735651 - MIR SINE MIR -65 143 109 1816 151 6 42 chr17 8769154 8769466 -80735087 + AluJo SINE Alu 1 301 -11 2294 104 7 10 chr17 8769797 8770104 -80734449 + AluSp SINE Alu 1 306 -7 200 314 20 0 chr17 8770119 8770170 -80734383 - L2 LINE L2 -30 3242 3191 1531 132 29 50 chr17 8770617 8770898 -80733655 + AluJb SINE Alu 1 275 -37 252 0 0 0 chr17 8770900 8770928 -80733625 + (CAAT)n Simple_repeat Simple_repeat 4 31 0 2327 84 0 20 chr17 8774233 8774365 -80730188 + AluSx SINE Alu 4 137 -175 2289 93 0 0 chr17 8774365 8774670 -80729883 + AluSg SINE Alu 2 306 0 2327 84 0 20 chr17 8774670 8774834 -80729719 + AluSx SINE Alu 137 295 -17 324 257 0 0 chr17 8775613 8775683 -80728870 + MIR SINE MIR 61 130 -78 451 286 91 48 chr17 8775836 8776001 -80728552 - MIR SINE MIR 0 262 83 2577 52 3 0 chr17 8776001 8776311 -80728242 - AluY SINE Alu 0 311 1 451 286 91 48 chr17 8776311 8776376 -80728177 - MIR SINE MIR -179 83 22 2487 67 0 0 chr17 8776376 8776673 -80727880 - AluY SINE Alu -14 297 1 2504 57 23 0 chr17 8778375 8778674 -80725879 - AluY SINE Alu -5 306 1 1276 200 148 38 chr17 8778674 8779196 -80725357 - L1MC3 LINE L1 -892 7103 6640 2289 114 0 0 chr17 8779196 8779495 -80725058 + AluSx SINE Alu 1 299 -13 1276 200 148 38 chr17 8779495 8779769 -80724784 - L1MC3 LINE L1 -1355 6640 6149 25 0 0 0 chr17 8779787 8779812 -80724741 + AT_rich Low_complexity Low_complexity 1 25 0 2152 101 3 14 chr17 8779819 8780107 -80724446 + AluSp SINE Alu 3 287 -26 396 55 0 0 chr17 8780111 8780166 -80724387 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 979 100 0 50 chr17 8780168 8780308 -80724245 + AluSc SINE Alu 1 133 -176 2489 71 3 0 chr17 8780308 8780605 -80723948 + AluY SINE Alu 1 298 -13 2347 94 3 10 chr17 8780609 8780944 -80723609 + AluSx SINE Alu 1 312 0 517 210 3 136 chr17 8780956 8781332 -80723221 - L1M4 LINE L1 -1070 5076 4751 830 213 197 8 chr17 8781838 8782077 -80722476 - MLT1K LTR MaLR -11 577 294 1911 171 47 75 chr17 8782077 8782528 -80722025 - LTR8 LTR ERV1 0 691 254 2345 103 0 3 chr17 8782532 8782834 -80721719 - AluSg SINE Alu -9 301 1 1667 183 146 84 chr17 8782834 8782892 -80721661 - LTR8 LTR ERV1 -109 582 529 2430 46 0 0 chr17 8782892 8783202 -80721351 - AluY SINE Alu 0 310 1 1667 183 146 84 chr17 8783202 8783690 -80720863 - LTR8 LTR ERV1 -162 529 1 207 0 0 0 chr17 8783704 8783727 -80720826 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2085 89 33 0 chr17 8784184 8784478 -80720075 + AluSg SINE Alu 1 303 0 991 228 14 0 chr17 8784673 8784888 -80719665 + LTR16C LTR ERVL 274 491 0 286 206 21 103 chr17 8784888 8784909 -80719644 - MIR SINE MIR -99 163 142 2526 39 0 0 chr17 8784909 8785233 -80719320 - AluY SINE Alu 0 324 1 286 206 21 103 chr17 8785233 8785307 -80719246 - MIR SINE MIR -120 142 75 2126 149 7 0 chr17 8785618 8785926 -80718627 + AluSx SINE Alu 1 310 -2 571 279 63 123 chr17 8785970 8786458 -80718095 + LTR67 LTR ERVL 99 557 0 1241 276 40 13 chr17 8786631 8787029 -80717524 - MLT1I LTR MaLR 0 409 1 2546 60 7 0 chr17 8787174 8787474 -80717079 - AluSp SINE Alu -10 303 2 2176 89 3 51 chr17 8787674 8787794 -80716759 + AluSx SINE Alu 1 125 -187 2604 66 0 0 chr17 8787794 8788099 -80716454 + AluY SINE Alu 1 305 -6 2176 89 3 51 chr17 8788099 8788291 -80716262 + AluSx SINE Alu 125 298 -14 189 181 14 42 chr17 8788562 8788634 -80715919 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 2283 125 0 0 chr17 8788744 8789047 -80715506 + AluSx SINE Alu 3 305 -7 946 195 0 6 chr17 8789047 8789240 -80715313 + AluSg/x SINE Alu 132 310 0 303 269 34 139 chr17 8789240 8789564 -80714989 - MLT1K LTR MaLR -111 477 188 2079 124 10 3 chr17 8789586 8789885 -80714668 + AluSg SINE Alu 1 301 -9 21 36 0 0 chr17 8790512 8790540 -80714013 + GC_rich Low_complexity Low_complexity 1 28 0 1788 149 28 84 chr17 8791145 8791205 -80713348 + LTR56 LTR ERV1 8 70 -375 1813 118 0 0 chr17 8791205 8791451 -80713102 + AluJo SINE Alu 54 299 -13 1788 149 28 84 chr17 8791451 8791809 -80712744 + LTR56 LTR ERV1 70 400 -45 2284 112 0 6 chr17 8791809 8792121 -80712432 - AluSx SINE Alu -2 310 1 1788 149 28 84 chr17 8792121 8792165 -80712388 + LTR56 LTR ERV1 400 445 0 282 306 38 50 chr17 8793286 8793446 -80711107 + L2 LINE L2 2920 3077 -236 2550 70 3 0 chr17 8793538 8793840 -80710713 - AluSp SINE Alu -10 303 1 2304 85 0 36 chr17 8793844 8794149 -80710404 - AluSx SINE Alu -18 294 1 1101 96 0 0 chr17 8794149 8794285 -80710268 - AluSq/x SINE Alu -177 136 1 565 207 29 81 chr17 8794287 8794461 -80710092 + L2 LINE L2 3148 3312 -1 2229 131 3 0 chr17 8794507 8794812 -80709741 - AluJb SINE Alu -6 306 1 186 103 0 0 chr17 8794912 8794941 -80709612 + (CCA)n Simple_repeat Simple_repeat 2 30 0 204 279 0 0 chr17 8796016 8796059 -80708494 + (CA)n Simple_repeat Simple_repeat 2 44 0 1252 234 89 32 chr17 8796980 8797547 -80707006 + L2 LINE L2 2725 3313 0 872 102 0 36 chr17 8797554 8797691 -80706862 + FLAM_C SINE Alu 1 132 -1 2153 129 10 3 chr17 8797700 8798010 -80706543 + AluSx SINE Alu 1 312 0 706 239 11 23 chr17 8799548 8799724 -80704829 + MIR SINE MIR 71 244 -18 2372 80 13 7 chr17 8799731 8800030 -80704523 - AluSx SINE Alu -11 301 1 21 0 0 0 chr17 8800040 8800061 -80704492 + AT_rich Low_complexity Low_complexity 1 21 0 513 284 193 9 chr17 8800080 8800298 -80704255 + MIR SINE MIR 2 259 -3 1442 162 24 20 chr17 8800417 8800664 -80703889 + AluJo SINE Alu 3 250 -62 2126 110 21 0 chr17 8800732 8801014 -80703539 + AluSx SINE Alu 1 288 -24 489 219 42 8 chr17 8801249 8801368 -80703185 - MER106A DNA MER1_type -113 123 1 410 195 0 0 chr17 8801421 8801503 -80703050 - MIR SINE MIR -84 124 43 756 157 0 50 chr17 8803136 8803276 -80701277 - FLAM_C SINE Alu 0 133 1 537 286 12 12 chr17 8803769 8803849 -80700704 - MIR SINE MIR -82 180 101 2301 101 0 3 chr17 8803849 8804147 -80700406 - AluSq SINE Alu -16 297 1 537 286 12 12 chr17 8804147 8804234 -80700319 - MIR SINE MIR -160 102 13 414 0 0 0 chr17 8807734 8807780 -80696773 + (TG)n Simple_repeat Simple_repeat 2 47 0 1374 167 83 62 chr17 8807880 8808011 -80696542 + AluJo SINE Alu 3 130 -182 2353 97 0 3 chr17 8808011 8808310 -80696243 + AluSq SINE Alu 1 298 -15 1374 167 83 62 chr17 8808310 8808466 -80696087 + AluJo SINE Alu 130 296 -16 2421 102 0 0 chr17 8808474 8808777 -80695776 + AluSq SINE Alu 1 303 -10 2271 100 10 0 chr17 8809488 8809778 -80694775 - AluSx SINE Alu -18 294 2 1575 141 0 28 chr17 8809779 8810028 -80694525 + AluJo SINE Alu 67 308 -4 784 179 0 8 chr17 8811010 8811144 -80693409 + FLAM_A SINE Alu 1 133 0 2290 107 0 3 chr17 8811148 8811446 -80693107 + AluSp SINE Alu 1 297 -16 1058 146 5 47 chr17 8811720 8811912 -80692641 - AluJo SINE Alu -2 310 127 616 232 32 13 chr17 8812197 8812306 -80692247 - MIR SINE MIR -73 189 75 367 167 26 0 chr17 8812306 8812384 -80692169 + MER116 DNA Mariner 1 80 0 616 232 32 13 chr17 8812384 8812429 -80692124 - MIR SINE MIR -187 75 32 2263 95 9 25 chr17 8812477 8812792 -80691761 - AluSq SINE Alu -3 310 1 22 0 0 0 chr17 8812803 8812825 -80691728 + AT_rich Low_complexity Low_complexity 1 22 0 1669 161 13 33 chr17 8812970 8813274 -80691279 - AluJo SINE Alu -14 298 1 538 298 114 35 chr17 8813284 8813376 -80691177 - L1ME LINE L1 -297 5824 5741 2132 144 0 3 chr17 8813376 8813674 -80690879 - AluSx SINE Alu -15 297 1 538 298 114 35 chr17 8813674 8813923 -80690630 - L1ME LINE L1 -380 5741 5456 1034 91 0 8 chr17 8813923 8814055 -80690498 - AluSc SINE Alu -178 131 1 306 0 0 0 chr17 8814057 8814091 -80690462 + (TG)n Simple_repeat Simple_repeat 2 35 0 1699 116 5 0 chr17 8814105 8814329 -80690224 - AluSx SINE Alu -86 226 2 716 186 0 0 chr17 8814341 8814465 -80690088 - FLAM_C SINE Alu -9 124 1 323 245 72 10 chr17 8814469 8814616 -80689937 - L1M3 LINE L1 -741 5430 5287 375 315 0 93 chr17 8814650 8814730 -80689823 - L1ME LINE L1 -659 5462 5403 2200 101 37 3 chr17 8814730 8815027 -80689526 - AluSg SINE Alu -2 308 2 375 315 0 93 chr17 8815027 8815108 -80689445 - L1ME LINE L1 -718 5403 5316 184 206 59 59 chr17 8816101 8816169 -80688384 + L2 LINE L2 186 253 -3061 4596 140 19 29 chr17 8817035 8817915 -80686638 - pTR5 LTR ERV1 -604 1600 31 1918 109 0 0 chr17 8817968 8818216 -80686337 + AluSx SINE Alu 1 248 -64 2083 84 14 28 chr17 8818291 8818608 -80685945 - AluSp SINE Alu 0 313 1 365 117 67 0 chr17 8818953 8819013 -80685540 - Charlie8 DNA MER1_type -1001 1416 1353 628 177 8 16 chr17 8819058 8819182 -80685371 - MLT1F LTR MaLR 0 542 420 26 0 0 0 chr17 8819186 8819212 -80685341 + AT_rich Low_complexity Low_complexity 1 26 0 2410 145 25 20 chr17 8819216 8819449 -80685104 - L1MA8 LINE L1 -20 6271 6041 2361 52 55 3 chr17 8819449 8819739 -80684814 - AluY SINE Alu -5 306 2 2284 110 0 3 chr17 8819740 8820039 -80684514 - AluSq SINE Alu -14 299 2 2410 145 25 20 chr17 8820039 8820250 -80684303 - L1MA8 LINE L1 -249 6042 5823 2215 145 0 0 chr17 8820250 8820560 -80683993 - AluSq SINE Alu -3 310 1 1627 131 41 28 chr17 8820924 8821214 -80683339 + AluSp SINE Alu 1 294 -19 431 239 80 75 chr17 8821330 8821531 -80683022 + LTR67 LTR ERVL 348 549 -8 254 216 40 14 chr17 8821540 8821614 -80682939 - Charlie8 DNA MER1_type -2243 174 99 1579 154 0 82 chr17 8821624 8821807 -80682746 - AluJo SINE Alu -10 292 96 2174 111 0 54 chr17 8821807 8821954 -80682599 + AluSx SINE Alu 1 154 -158 2361 68 4 0 chr17 8821954 8822234 -80682319 + AluSp SINE Alu 1 281 -32 273 29 0 0 chr17 8822235 8822269 -80682284 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 2174 111 0 54 chr17 8822269 8822435 -80682118 + AluSx SINE Alu 153 299 -13 1579 154 0 82 chr17 8822435 8822569 -80681984 - AluJo SINE Alu -206 96 1 1075 201 4 39 chr17 8822589 8822823 -80681730 - MLT1A1 LTR MaLR 0 365 140 1039 67 0 0 chr17 8822829 8822949 -80681604 + AluSq/x SINE Alu 1 120 -193 388 80 0 0 chr17 8822953 8823003 -80681550 - AluSp SINE Alu -43 260 211 1342 137 89 117 chr17 8823003 8823464 -80681089 - LTR7 LTR ERV1 -2 448 1 1800 74 5 0 chr17 8823464 8823679 -80680874 - AluSp SINE Alu -97 216 1 463 193 42 17 chr17 8823714 8823833 -80680720 + MLT2F LTR ERVL 12 133 -530 627 250 39 34 chr17 8823851 8823962 -80680591 + MLT1I LTR MaLR 201 315 -94 1349 224 15 64 chr17 8823962 8824355 -80680198 + MLT1A2 LTR MaLR 1 374 0 627 250 39 34 chr17 8824355 8824451 -80680102 + MLT1I LTR MaLR 315 409 0 1831 174 0 0 chr17 8824671 8824975 -80679578 + AluJb SINE Alu 9 312 0 331 170 0 0 chr17 8825150 8825203 -80679350 + Tigger7 DNA MER2_type 26 78 -655 2377 102 3 0 chr17 8825207 8825510 -80679043 + AluSx SINE Alu 1 304 -8 438 177 0 0 chr17 8825749 8825828 -80678725 + FLAM_A SINE Alu 29 107 -35 4001 150 37 47 chr17 8825839 8826237 -80678316 + L1MC2 LINE L1 5186 5587 -757 1826 135 59 17 chr17 8826237 8826526 -80678027 - AluSg SINE Alu -9 301 1 4001 150 37 47 chr17 8826526 8826559 -80677994 + L1MC2 LINE L1 5587 5619 -725 2432 71 0 3 chr17 8826559 8826854 -80677699 - AluY SINE Alu -17 294 1 4001 150 37 47 chr17 8826854 8827351 -80677202 + L1MC2 LINE L1 5619 6106 -238 995 193 6 0 chr17 8827351 8827517 -80677036 + FRAM SINE Alu 1 162 -14 317 125 0 0 chr17 8827521 8827569 -80676984 + L1MC2 LINE L1 6103 6150 -194 983 85 0 0 chr17 8827569 8827698 -80676855 + AluSp/q SINE Alu 181 309 -4 2241 112 23 0 chr17 8827757 8828060 -80676493 - AluSx SINE Alu -2 310 1 2831 173 73 38 chr17 8828524 8828627 -80675926 - L1MC4 LINE L1 0 8322 8224 2447 72 7 0 chr17 8828627 8828919 -80675634 - AluSg SINE Alu -14 296 3 2831 173 73 38 chr17 8828919 8828974 -80675579 - L1MC4 LINE L1 -98 8224 8172 297 0 0 0 chr17 8828974 8829007 -80675546 + (CA)n Simple_repeat Simple_repeat 1 33 0 2831 173 73 38 chr17 8829007 8829529 -80675024 - L1MC4 LINE L1 -150 8172 7617 258 318 47 0 chr17 8829716 8829801 -80674752 + L2 LINE L2 3224 3312 -1 228 67 0 0 chr17 8830514 8830544 -80674009 + (TAA)n Simple_repeat Simple_repeat 2 31 0 234 330 23 23 chr17 8831538 8831626 -80672927 - MIR3 SINE MIR -22 186 99 1202 153 113 4 chr17 8831834 8832063 -80672490 - AluJo SINE Alu -58 254 1 2372 70 10 23 chr17 8832275 8832577 -80671976 + AluY SINE Alu 1 298 -13 2128 228 110 9 chr17 8832767 8833302 -80671251 - MLT1G1 LTR MaLR -5 590 2 2086 129 17 0 chr17 8833590 8833877 -80670676 - AluSx SINE Alu -20 292 1 402 192 14 68 chr17 8834005 8834100 -80670453 - L1MC4 LINE L1 -1339 6983 6884 2364 106 0 0 chr17 8834100 8834403 -80670150 - AluSx SINE Alu -9 303 1 402 192 14 68 chr17 8834403 8834430 -80670123 - L1MC4 LINE L1 -1438 6884 1974 331 267 82 22 chr17 8834442 8834577 -80669976 - L1M4 LINE L1 -1182 4964 4822 969 205 23 0 chr17 8834580 8834751 -80669802 - AluJb SINE Alu -1 311 137 659 275 24 29 chr17 8834846 8834987 -80669566 - Charlie8 DNA MER1_type -134 207 66 2347 113 0 0 chr17 8834987 8835289 -80669264 + AluSq SINE Alu 2 303 -10 659 275 24 29 chr17 8835289 8835354 -80669199 - Charlie8 DNA MER1_type -275 66 2 212 243 36 126 chr17 8835892 8836003 -80668550 - MIR SINE MIR -41 221 121 2235 84 6 22 chr17 8836081 8836392 -80668161 + AluSg SINE Alu 1 306 -4 292 301 58 19 chr17 8836435 8836538 -80668015 - L2 LINE L2 -2 3270 3164 2092 119 10 3 chr17 8836961 8837254 -80667299 - AluSx SINE Alu -17 295 1 2115 112 7 0 chr17 8837638 8837916 -80666637 - AluSg SINE Alu -30 280 1 2285 91 0 10 chr17 8838113 8838410 -80666143 + AluSc SINE Alu 1 294 -15 1200 117 0 6 chr17 8838410 8838573 -80665980 + AluSc SINE Alu 132 293 -16 1642 12 0 0 chr17 8838573 8838743 -80665810 - SVA Other Other -99 1287 1118 901 20 0 0 chr17 8838743 8838844 -80665709 + SVA Other Other 1284 1384 -2 696 152 80 16 chr17 8838875 8839000 -80665553 + FLAM_C SINE Alu 1 133 0 416 225 80 14 chr17 8839006 8839144 -80665409 + MLT1C LTR MaLR 27 173 -332 1080 217 34 49 chr17 8839307 8839531 -80665022 + MLT1C LTR MaLR 205 426 -41 2203 124 7 0 chr17 8839531 8839829 -80664724 - AluSx SINE Alu -12 300 1 1080 217 34 49 chr17 8839829 8839871 -80664682 + MLT1C LTR MaLR 426 467 0 2218 106 7 3 chr17 8841776 8842069 -80662484 + AluSx SINE Alu 1 294 -18 623 84 0 75 chr17 8843263 8843370 -80661183 - AluJb SINE Alu -179 133 35 * 666 180 0 9 chr17 8843369 8843480 -80661073 - AluSq/x SINE Alu -202 111 2 856 153 0 0 chr17 8843673 8843804 -80660749 + FLAM_C SINE Alu 3 133 0 10105 59 9 85 chr17 8844024 8845523 -80659030 + SVA Other Other 1 1386 0 2192 94 34 0 chr17 8845542 8845839 -80658714 + AluY SINE Alu 1 307 -4 474 292 20 64 chr17 8845851 8845890 -80658663 + MER102b DNA MER1_type 97 136 -1292 2394 81 0 0 chr17 8845890 8846185 -80658368 - AluY SINE Alu -16 295 1 474 292 20 64 chr17 8846185 8846395 -80658158 + MER102b DNA MER1_type 136 335 -6 1083 128 75 102 chr17 8846399 8846625 -80657928 - AluJb SINE Alu -6 306 87 417 279 56 9 chr17 8847140 8847302 -80657251 + MIR SINE MIR 46 223 -39 184 299 0 52 chr17 8847327 8847404 -80657149 + L2 LINE L2 2993 3065 -207 2081 133 0 16 chr17 8848922 8849231 -80655322 + AluSx SINE Alu 1 304 -8 839 126 8 8 chr17 8849251 8849378 -80655175 + AluSp/q SINE Alu 170 296 -17 277 262 177 26 chr17 8849574 8849838 -80654715 - L2 LINE L2 -56 3257 2920 478 230 119 0 chr17 8849857 8849983 -80654570 - MER5A DNA MER1_type -2 187 47 633 100 20 10 chr17 8850048 8850148 -80654405 - AluSp/q SINE Alu -1 312 212 1969 122 21 10 chr17 8850162 8850450 -80654103 + AluSx SINE Alu 1 291 -21 3271 145 46 55 chr17 8851564 8852261 -80652292 + LTR8 LTR ERV1 1 691 0 325 165 126 4 chr17 8852353 8852514 -80652039 + AluJo SINE Alu 70 282 -20 2355 73 0 10 chr17 8852514 8852816 -80651737 + AluSq SINE Alu 1 299 -14 2337 66 36 10 chr17 8854900 8854917 -80649636 - AluSq SINE Alu 0 313 298 558 0 0 0 chr17 8854917 8854979 -80649574 + (TG)n Simple_repeat Simple_repeat 2 63 0 2337 66 36 10 chr17 8854979 8855266 -80649287 - AluSq SINE Alu -15 298 1 608 265 64 23 chr17 8855374 8855593 -80648960 - MIR SINE MIR 0 262 35 785 171 16 0 chr17 8855754 8855883 -80648670 + FLAM_C SINE Alu 2 132 -11 2320 63 0 11 chr17 8855920 8856244 -80648309 + AluY SINE Alu 5 311 0 508 259 131 40 chr17 8856250 8856602 -80647951 + L1ME4a LINE L1 5613 5996 -125 22 0 0 0 chr17 8856914 8856936 -80647617 + AT_rich Low_complexity Low_complexity 1 22 0 747 158 6 11 chr17 8856953 8857130 -80647423 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 407 210 3 27 chr17 8857155 8857453 -80647100 + (TAGA)n Simple_repeat Simple_repeat 1 290 0 679 214 19 44 chr17 8857454 8857613 -80646940 - MIR SINE MIR -10 252 98 292 262 0 0 chr17 8857594 8857655 -80646898 - MIR SINE MIR -67 141 81 * 602 100 0 0 chr17 8858051 8858131 -80646422 + AluSc SINE Alu 202 281 -28 402 57 0 0 chr17 8858928 8858981 -80645572 + (CA)n Simple_repeat Simple_repeat 2 54 0 405 264 40 35 chr17 8859195 8859369 -80645184 + L3 LINE CR1 997 1171 -406 194 233 75 120 chr17 8859478 8859611 -80644942 + MER5A DNA MER1_type 3 129 -60 * 250 267 111 11 chr17 8859529 8859619 -80644934 - MER5A DNA MER1_type -27 162 64 2128 91 45 3 chr17 8859835 8860121 -80644432 + AluSx SINE Alu 1 298 -14 295 71 18 18 chr17 8860229 8860285 -80644268 + (CAAAAA)n Simple_repeat Simple_repeat 4 59 0 1256 171 24 0 chr17 8860299 8860545 -80644008 + L1M3 LINE L1 5483 5734 -449 335 295 124 47 chr17 8861934 8862063 -80642490 - MER91A DNA MER1_type -36 160 22 1822 104 0 50 chr17 8862331 8862591 -80641962 - AluSx SINE Alu -65 247 1 2192 107 0 26 chr17 8862871 8863179 -80641374 - AluSx SINE Alu -11 301 2 1535 146 31 8 chr17 8863218 8863472 -80641081 + AluSx SINE Alu 1 260 -52 1570 72 5 5 chr17 8863567 8863762 -80640791 + AluY SINE Alu 1 195 -116 460 171 0 0 chr17 8864089 8864165 -80640388 + MIR3 SINE MIR 87 162 -46 2241 157 122 9 chr17 8864406 8864857 -80639696 - MLT1D LTR MaLR 0 505 4 576 239 70 35 chr17 8865905 8865988 -80638565 - L1ME LINE L1 -331 5790 5711 2352 96 0 3 chr17 8865988 8866289 -80638264 + AluSp SINE Alu 1 300 -13 576 239 70 35 chr17 8866289 8866435 -80638118 - L1ME LINE L1 -410 5711 5553 2047 68 0 0 chr17 8866448 8866684 -80637869 + AluSg SINE Alu 61 296 -14 483 96 0 14 chr17 8867411 8867484 -80637069 - MER5A DNA MER1_type -83 106 35 247 175 41 124 chr17 8867413 8867510 -80637043 + MER5A DNA MER1_type 96 184 -5 * 815 243 17 6 chr17 8867646 8867823 -80636730 + MIR SINE MIR 76 254 -8 1999 120 14 0 chr17 8867924 8868200 -80636353 + AluSg1 SINE Alu 1 280 -29 212 257 168 26 chr17 8868618 8868731 -80635822 - L2 LINE L2 -10 3262 3134 776 63 9 0 chr17 8869469 8869580 -80634973 + (TAGA)n Simple_repeat Simple_repeat 2 113 0 261 0 0 0 chr17 8869645 8869674 -80634879 + (CA)n Simple_repeat Simple_repeat 2 30 0 2369 100 0 0 chr17 8869936 8870226 -80634327 + AluSg SINE Alu 3 292 -18 475 304 49 104 chr17 8870361 8870726 -80633827 + L2 LINE L2 2928 3272 0 2589 42 0 10 chr17 8870959 8871265 -80633288 + AluY SINE Alu 1 303 -8 1103 106 0 0 chr17 8871270 8871411 -80633142 + AluSq/x SINE Alu 1 141 -172 652 208 107 0 chr17 8871579 8871728 -80632825 - MIR SINE MIR -42 220 56 294 225 181 75 chr17 8871726 8871886 -80632667 - MIR3 SINE MIR -11 197 21 * 403 232 165 52 chr17 8872278 8872623 -80631930 + L1ME4a LINE L1 5738 6121 0 695 235 9 0 chr17 8872694 8872711 -80631842 + GA-rich Low_complexity Low_complexity 1 16 -529 1730 201 7 3 chr17 8872711 8873019 -80631534 + AluJb SINE Alu 1 309 -3 695 235 9 0 chr17 8873019 8873235 -80631318 + GA-rich Low_complexity Low_complexity 16 545 0 473 314 12 40 chr17 8873293 8873545 -80631008 + L1ME4a LINE L1 5309 5553 -2255 1377 260 72 100 chr17 8873565 8874493 -80630060 + HAL1 LINE L1 16 906 -1601 1437 148 186 11 chr17 8874493 8874756 -80629797 + AluSg1 SINE Alu 1 309 0 1377 260 72 100 chr17 8874756 8875007 -80629546 + HAL1 LINE L1 905 1162 -1345 1491 245 90 20 chr17 8875126 8875725 -80628828 + HAL1 LINE L1 1126 1766 -741 * 1613 115 0 8 chr17 8875717 8875970 -80628583 + L1MB3 LINE L1 5892 6142 -41 2173 96 0 4 chr17 8875970 8876250 -80628303 + AluSg SINE Alu 1 279 -31 1771 127 50 4 chr17 8876304 8876589 -80627964 + AluJb SINE Alu 11 307 0 1204 190 5 5 chr17 8876637 8876842 -80627711 + AluJb SINE Alu 100 304 -8 231 125 0 0 chr17 8876842 8876882 -80627671 + (GA)n Simple_repeat Simple_repeat 1 40 0 354 211 141 122 chr17 8876898 8877202 -80627351 + HAL1 LINE L1 1721 2030 -477 665 191 8 0 chr17 8877202 8877328 -80627225 + FLAM_A SINE Alu 5 131 -2 2525 58 0 0 chr17 8877339 8877631 -80626922 - AluY SINE Alu -19 292 1 935 266 64 10 chr17 8877632 8878023 -80626530 + L1ME4a LINE L1 5552 5963 -158 364 198 29 77 chr17 8879249 8879288 -80625265 + MIR SINE MIR 57 96 -139 2390 89 0 0 chr17 8879288 8879581 -80624972 + AluSx SINE Alu 3 295 -17 364 198 29 77 chr17 8879581 8879657 -80624896 + MIR SINE MIR 96 167 -68 597 92 92 0 chr17 8879757 8879844 -80624709 - AluJ/FLAM SINE Alu -216 96 2 1252 264 81 49 chr17 8879852 8879904 -80624649 - L1MC4a LINE L1 -1826 5982 5933 2486 88 0 0 chr17 8879904 8880209 -80624344 - AluSx SINE Alu -7 305 1 1252 264 81 49 chr17 8880209 8880763 -80623790 - L1MC4a LINE L1 -1875 5933 5357 2454 73 3 3 chr17 8880787 8881089 -80623464 - AluSg SINE Alu 0 310 9 2398 72 14 0 chr17 8881497 8881787 -80622766 - AluSg SINE Alu -16 294 1 203 56 83 0 chr17 8883581 8883617 -80620936 + (GCCTG)n Simple_repeat Simple_repeat 5 43 0 275 320 0 24 chr17 8884034 8884159 -80620394 + CT-rich Low_complexity Low_complexity 2 123 0 690 321 81 29 chr17 8884574 8884947 -80619606 - MARNA DNA Mariner -14 572 167 2200 110 0 13 chr17 8884947 8885248 -80619305 - AluSx SINE Alu -9 303 7 690 321 81 29 chr17 8885248 8885354 -80619199 - MARNA DNA Mariner -419 167 68 777 243 63 29 chr17 8885799 8886005 -80618548 + MIR SINE MIR 50 262 0 180 77 0 0 chr17 8886411 8886437 -80618116 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 393 257 119 9 chr17 8886444 8886553 -80618000 - L2 LINE L2 -6 3307 3187 345 336 36 7 chr17 8886670 8886810 -80617743 - MIR3 SINE MIR -16 192 49 224 227 0 67 chr17 8887218 8887293 -80617260 + CT-rich Low_complexity Low_complexity 4 73 0 25 0 0 0 chr17 8887525 8887550 -80617003 + AT_rich Low_complexity Low_complexity 1 25 0 404 261 162 0 chr17 8887550 8887692 -80616861 - MIR SINE MIR -1 261 97 216 111 0 0 chr17 8888076 8888112 -80616441 + (TC)n Simple_repeat Simple_repeat 1 36 0 330 292 104 10 chr17 8888873 8889075 -80615478 + L1ME4a LINE L1 5844 6064 -57 2059 138 7 14 chr17 8889120 8889417 -80615136 + AluSx SINE Alu 3 297 -15 2074 138 3 3 chr17 8889680 8889978 -80614575 + AluJb SINE Alu 1 298 -14 184 255 85 0 chr17 8889990 8890037 -80614516 - L2 LINE L2 -1 3312 3262 1481 235 7 0 chr17 8890164 8890470 -80614083 - AluJo SINE Alu -4 308 1 338 263 183 0 chr17 8890494 8890631 -80613922 + L2 LINE L2 3151 3312 -1 2226 114 0 22 chr17 8891799 8892116 -80612437 + AluSx SINE Alu 1 310 -2 218 280 0 0 chr17 8892195 8892245 -80612308 - L2 LINE L2 -3 3310 3261 434 266 50 50 chr17 8892451 8892650 -80611903 + L2 LINE L2 3114 3312 -1 383 0 21 0 chr17 8892695 8892742 -80611811 + (TG)n Simple_repeat Simple_repeat 2 49 0 2336 110 0 0 chr17 8892743 8893043 -80611510 - AluSg SINE Alu -10 300 1 2250 97 14 0 chr17 8893063 8893353 -80611200 - AluY SINE Alu -17 294 1 26 64 0 0 chr17 8893353 8893400 -80611153 + AT_rich Low_complexity Low_complexity 1 47 0 415 302 93 80 chr17 8893651 8894091 -80610462 - L2 LINE L2 -1 3271 2826 461 236 34 61 chr17 8895764 8895912 -80608641 + MIR SINE MIR 103 246 -16 538 283 71 49 chr17 8895930 8896156 -80608397 + MIR SINE MIR 2 232 -30 7172 122 23 60 chr17 8896156 8896258 -80608295 - HSMAR2 DNA Mariner 0 1302 1198 1873 140 49 11 chr17 8896258 8896544 -80608009 - AluSx SINE Alu -15 297 1 7172 122 23 60 chr17 8896544 8896686 -80607867 - HSMAR2 DNA Mariner -104 1198 1052 398 75 15 0 chr17 8896686 8896753 -80607800 + (TA)n Simple_repeat Simple_repeat 2 69 0 7172 122 23 60 chr17 8896753 8896778 -80607775 - HSMAR2 DNA Mariner -250 1052 1028 2498 59 0 0 chr17 8896778 8897065 -80607488 - AluY SINE Alu -24 287 1 7172 122 23 60 chr17 8897065 8898063 -80606490 - HSMAR2 DNA Mariner -274 1028 81 850 172 0 8 chr17 8898063 8898197 -80606356 - FLAM_C SINE Alu 0 133 1 7172 122 23 60 chr17 8898197 8898252 -80606301 - HSMAR2 DNA Mariner -1221 81 26 2561 28 7 0 chr17 8898646 8898956 -80605597 + AluSq SINE Alu 1 287 -26 372 307 154 36 chr17 8899139 8899445 -80605108 - L2 LINE L2 0 3313 2972 23 0 0 0 chr17 8900006 8900029 -80604524 + GC_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr17 8901079 8901112 -80603441 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr17 8901208 8901230 -80603323 + AT_rich Low_complexity Low_complexity 1 22 0 2202 82 7 0 chr17 8901821 8902113 -80602440 - AluSg SINE Alu -16 294 1 501 268 80 74 chr17 8902318 8902370 -80602183 - MARNA DNA Mariner -201 385 335 1713 176 3 3 chr17 8902370 8902672 -80601881 - AluJb SINE Alu -10 302 1 501 268 80 74 chr17 8902672 8902782 -80601771 - MARNA DNA Mariner -251 335 227 2294 73 3 16 chr17 8902782 8903096 -80601457 - AluY SINE Alu -1 310 1 2058 99 6 41 chr17 8903096 8903410 -80601143 - AluSq SINE Alu -10 303 1 501 268 80 74 chr17 8903410 8903581 -80600972 - MARNA DNA Mariner -358 228 48 848 188 90 106 chr17 8903636 8903891 -80600662 - MIR SINE MIR -10 252 2 2148 107 7 0 chr17 8904092 8904392 -80600161 + AluSg SINE Alu 1 302 -8 273 242 44 0 chr17 8905626 8905717 -80598836 - HAL1 LINE L1 -698 1809 1715 848 128 5 138 chr17 8906274 8906462 -80598091 - FRAM SINE Alu -13 163 1 2318 57 33 10 chr17 8906634 8906935 -80597618 - AluY SINE Alu -3 308 1 206 214 107 71 chr17 8907006 8907090 -80597463 - L2 LINE L2 -5 3308 3222 239 328 121 35 chr17 8907197 8907395 -80597158 - L2 LINE L2 -215 3057 2843 1316 173 191 8 chr17 8908913 8909300 -80595253 - Charlie4a DNA MER1_type -3 505 48 2094 128 0 0 chr17 8911001 8911299 -80593254 - AluSx SINE Alu -14 298 1 535 70 14 0 chr17 8911859 8911930 -80592623 - MER51A LTR ERV1 -284 350 279 * 811 129 0 0 chr17 8911926 8912052 -80592501 - MER51A LTR ERV1 -501 133 18 1434 140 53 4 chr17 8912567 8912795 -80591758 - MER8 DNA MER2_type 0 239 1 2172 97 0 0 chr17 8912849 8913137 -80591416 - AluSg SINE Alu -22 288 1 608 228 16 0 chr17 8913162 8913285 -80591268 - FLAM_C SINE Alu -18 125 1 2691 164 50 2 chr17 8913285 8913766 -80590787 - L1MB2 LINE L1 -43 6128 5625 2280 82 0 20 chr17 8913857 8914160 -80590393 + AluSx SINE Alu 1 297 -15 403 262 162 26 chr17 8915072 8915301 -80589252 - L1ME4a LINE L1 -4 6117 5858 608 147 86 0 chr17 8915741 8915857 -80588696 - MER3 DNA MER1_type 0 209 84 346 19 75 0 chr17 8916526 8916579 -80587974 + CT-rich Low_complexity Low_complexity 2 58 0 2119 126 10 0 chr17 8916586 8916895 -80587658 - AluSq SINE Alu -1 312 1 507 293 61 12 chr17 8917039 8917203 -80587350 - L2 LINE L2 -24 3289 3118 367 224 370 5 chr17 8917214 8917406 -80587147 - MIR SINE MIR 0 262 1 386 293 77 28 chr17 8917483 8917770 -80586783 + L1ME LINE L1 4513 4813 -1333 254 308 94 6 chr17 8917831 8917990 -80586563 + L1ME LINE L1 4901 5073 -1073 367 331 70 6 chr17 8918059 8918216 -80586337 + L1ME LINE L1 5232 5398 -748 586 279 149 30 chr17 8918224 8918525 -80586028 + L1ME LINE L1 5456 5792 -329 2372 62 3 7 chr17 8919262 8919568 -80584985 + AluSq SINE Alu 1 305 -8 239 248 106 26 chr17 8920149 8920262 -80584291 - HAL1 LINE L1 -99 2408 2287 25 51 0 0 chr17 8920265 8920304 -80584249 + AT_rich Low_complexity Low_complexity 1 39 0 2287 101 0 0 chr17 8920350 8920656 -80583897 - AluSx SINE Alu -6 306 1 334 344 78 7 chr17 8921129 8921283 -80583270 - HAL1 LINE L1 -698 1809 1645 210 244 61 17 chr17 8921696 8921811 -80582742 + (TATATG)n Simple_repeat Simple_repeat 5 124 0 349 337 203 11 chr17 8921840 8922318 -80582235 + L2 LINE L2 1772 2341 -973 189 0 0 0 chr17 8922406 8922427 -80582126 + (TG)n Simple_repeat Simple_repeat 2 22 0 1880 148 0 16 chr17 8922578 8922889 -80581664 - AluSx SINE Alu -6 306 1 322 283 28 78 chr17 8924678 8924858 -80579695 - L1ME4a LINE L1 -189 5932 5762 770 109 78 16 chr17 8925272 8925400 -80579153 - AluJo SINE Alu -176 136 1 202 211 0 0 chr17 8926661 8926699 -80577854 + (TG)n Simple_repeat Simple_repeat 2 39 0 308 196 62 52 chr17 8930112 8930209 -80574344 + L1MC4 LINE L1 6608 6705 -1337 527 239 22 50 chr17 8930326 8930506 -80574047 - L1ME4a LINE L1 -206 5915 5741 1941 91 0 0 chr17 8932616 8932868 -80571685 + AluSg SINE Alu 36 287 -23 21 0 0 0 chr17 8933490 8933511 -80571042 + AT_rich Low_complexity Low_complexity 1 21 0 339 89 0 0 chr17 8933518 8933563 -80570990 - HY4 scRNA scRNA -3 90 46 1943 93 30 43 chr17 8933563 8933865 -80570688 - AluSx SINE Alu -14 298 1 344 129 106 129 chr17 8934917 8935002 -80569551 - HsTC2 DNA Tc2 -349 1549 1291 1255 104 6 0 chr17 8935002 8935185 -80569368 - AluSp SINE Alu -7 306 123 271 149 21 0 chr17 8935185 8935232 -80569321 - HsTC2 DNA Tc2 -595 1303 1256 235 176 98 0 chr17 8935233 8935284 -80569269 - HsTC2 DNA Tc2 -1763 135 80 1744 118 7 36 chr17 8936229 8936534 -80568019 + AluSx SINE Alu 1 296 -16 2054 114 3 10 chr17 8937045 8937343 -80567210 - AluSx SINE Alu -16 296 1 491 259 175 0 chr17 8940115 8940258 -80564295 - MER58C DNA MER1_type -29 186 19 467 284 8 8 chr17 8941837 8941964 -80562589 - L2 LINE L2 -7 3306 3180 2081 98 0 3 chr17 8942593 8942889 -80561664 - AluSx SINE Alu -17 295 1 625 257 163 33 chr17 8944439 8944801 -80559752 + L2 LINE L2 2405 2813 -501 397 278 103 8 chr17 8945984 8946110 -80558443 - MIR3 SINE MIR -64 144 7 693 271 50 13 chr17 8946880 8947179 -80557374 + L1MB8 LINE L1 2788 3097 -3049 513 263 80 6 chr17 8947224 8947399 -80557154 - L1MEd LINE L1 -5900 219 32 407 218 228 0 chr17 8948184 8948285 -80556268 - FLAM_C SINE Alu -9 124 1 313 188 43 29 chr17 8948310 8948379 -80556174 - L1ME4a LINE L1 0 6121 6052 3257 195 57 62 chr17 8948385 8949322 -80555231 + L1MB8 LINE L1 3689 4620 -1526 239 164 104 0 chr17 8949362 8949429 -80555124 + L1MB8 LINE L1 5229 5302 -844 3831 173 35 20 chr17 8949435 8950214 -80554339 + L1MB8 LINE L1 5389 6178 0 463 214 92 0 chr17 8950286 8950384 -80554169 + AluJb SINE Alu 199 305 -7 315 0 0 0 chr17 8950401 8950436 -80554117 + (A)n Simple_repeat Simple_repeat 1 35 0 242 159 45 102 chr17 8950657 8950745 -80553808 - L1ME LINE L1 -372 5749 5667 1504 229 28 30 chr17 8951111 8951538 -80553015 + L1MB8 LINE L1 5753 6178 0 331 247 93 41 chr17 8951611 8951708 -80552845 + FRAM SINE Alu 64 165 -1 318 303 81 66 chr17 8951730 8951928 -80552625 - L1ME4a LINE L1 -49 6072 5872 285 150 46 100 chr17 8951972 8952069 -80552484 - L1ME4a LINE L1 -372 5749 5667 1627 173 198 29 chr17 8954070 8954550 -80550003 + MLT1F1 LTR MaLR 5 565 -2 2126 108 0 0 chr17 8954602 8954889 -80549664 + AluSx SINE Alu 1 287 -25 342 0 0 0 chr17 8954889 8954927 -80549626 + (CA)n Simple_repeat Simple_repeat 2 39 0 23 0 0 0 chr17 8955349 8955372 -80549181 + AT_rich Low_complexity Low_complexity 1 23 0 292 330 51 0 chr17 8956744 8956899 -80547654 - MIR SINE MIR -65 143 16 200 233 0 0 chr17 8957799 8957842 -80546711 + T-rich Low_complexity Low_complexity 1 43 0 1860 126 56 0 chr17 8958258 8958543 -80546010 + AluSx SINE Alu 1 301 -11 229 250 62 0 chr17 8959736 8959800 -80544753 + L2 LINE L2 3204 3271 -1 2103 89 7 3 chr17 8960896 8961189 -80543364 - AluSg SINE Alu -16 294 1 22 0 0 0 chr17 8961263 8961285 -80543268 + AT_rich Low_complexity Low_complexity 1 22 0 221 331 29 29 chr17 8961555 8961694 -80542859 + MIR SINE MIR 6 144 -118 2945 192 22 0 chr17 8961894 8962431 -80542122 + MER68 LTR ERV1 14 562 0 505 199 50 71 chr17 8962566 8962638 -80541915 - MER2 DNA MER2_type 0 345 276 2463 74 0 0 chr17 8962638 8962948 -80541605 + AluY SINE Alu 1 310 -1 505 199 50 71 chr17 8962948 8963016 -80541537 - MER2 DNA MER2_type -69 276 208 549 270 29 64 chr17 8963161 8963336 -80541217 - L1ME LINE L1 -397 5724 5555 2194 98 0 3 chr17 8963336 8963643 -80540910 + AluY SINE Alu 1 306 -5 549 270 29 64 chr17 8963643 8963671 -80540882 - L1ME LINE L1 -566 5555 5528 245 304 0 0 chr17 8964324 8964380 -80540173 + L2 LINE L2 3258 3313 0 810 289 44 8 chr17 8964676 8964925 -80539628 + MIR SINE MIR 4 261 -1 861 191 51 0 chr17 8965928 8966085 -80538468 + AluJb SINE Alu 144 308 -4 225 0 0 0 chr17 8967251 8967276 -80537277 + (TG)n Simple_repeat Simple_repeat 2 26 0 280 210 16 0 chr17 8967312 8967374 -80537179 - L3b LINE CR1 -350 1233 1171 2367 73 3 3 chr17 8967771 8968084 -80536469 + AluSp SINE Alu 1 313 0 227 250 42 108 chr17 8969831 8969951 -80534602 - MIR SINE MIR -97 111 12 2082 116 7 0 chr17 8970469 8970770 -80533783 + AluSx SINE Alu 1 303 -9 2202 107 3 3 chr17 8972460 8972770 -80531783 + AluSq SINE Alu 1 310 -3 591 200 25 0 chr17 8972817 8972937 -80531616 - AluJo/FRAM SINE Alu -14 298 176 1393 161 17 0 chr17 8972937 8973173 -80531380 - AluJo SINE Alu -72 240 1 269 284 71 43 chr17 8973549 8973583 -80530970 + L2 LINE L2 3125 3157 -115 3099 169 30 40 chr17 8973583 8974191 -80530362 + MER7C DNA MER2_type 1 602 0 269 284 71 43 chr17 8974191 8974297 -80530256 + L2 LINE L2 3157 3269 -3 21 0 0 0 chr17 8974521 8974542 -80530011 + AT_rich Low_complexity Low_complexity 1 21 0 311 288 121 44 chr17 8974782 8974811 -80529742 + L1ME4a LINE L1 5409 5434 -736 1887 78 0 16 chr17 8974811 8975069 -80529484 - AluY SINE Alu -14 297 44 311 288 121 44 chr17 8975069 8975288 -80529265 + L1ME4a LINE L1 5434 5683 -487 352 285 139 7 chr17 8975298 8975442 -80529111 + L1ME4a LINE L1 5710 5872 -249 609 150 0 9 chr17 8975713 8975786 -80528767 + L1MA2 LINE L1 6193 6266 -38 444 82 0 0 chr17 8975786 8975847 -80528706 + (TA)n Simple_repeat Simple_repeat 2 62 0 609 150 0 9 chr17 8975847 8975886 -80528667 + L1MA2 LINE L1 6266 6304 0 399 115 16 0 chr17 8975895 8975956 -80528597 + U7 snRNA snRNA 1 62 -1 2337 87 3 0 chr17 8976008 8976320 -80528233 + AluSq SINE Alu 1 313 0 782 228 14 27 chr17 8976463 8976682 -80527871 - L1MC5 LINE L1 -49 7912 7697 206 341 112 28 chr17 8979733 8979912 -80524641 + L2 LINE L2 3078 3271 -1 2280 93 0 3 chr17 8980305 8980615 -80523938 - AluSx SINE Alu -3 309 1 2388 56 0 10 chr17 8981628 8981931 -80522622 + AluY SINE Alu 1 300 -11 229 337 27 53 chr17 8982311 8982498 -80522055 + L2 LINE L2 2508 2689 -625 364 332 131 9 chr17 8982558 8982787 -80521766 + L2 LINE L2 2829 3085 -228 225 0 0 0 chr17 8982795 8982820 -80521733 + (TG)n Simple_repeat Simple_repeat 1 25 0 396 0 0 0 chr17 8982874 8982918 -80521635 + (TG)n Simple_repeat Simple_repeat 2 45 0 1753 154 0 3 chr17 8982918 8983203 -80521350 - AluJb SINE Alu -28 284 1 406 261 0 0 chr17 8984191 8984279 -80520274 + L1ME3 LINE L1 6075 6162 0 347 256 122 12 chr17 8984818 8984982 -80519571 + L1ME4a LINE L1 5936 6117 -4 2011 87 11 3 chr17 8985007 8985294 -80519259 + AluY SINE Alu 21 309 -2 230 299 112 10 chr17 8987029 8987171 -80517382 - MIR SINE MIR -36 226 59 200 322 58 11 chr17 8988032 8988119 -80516434 + L2 LINE L2 3223 3313 0 652 314 79 48 chr17 8988381 8988839 -80515714 - L2 LINE L2 -620 2694 2223 2249 103 0 28 chr17 8988928 8989249 -80515304 + AluSx SINE Alu 1 312 0 356 267 50 10 chr17 8989665 8989766 -80514787 + MIR SINE MIR 71 175 -87 1421 176 9 46 chr17 8990073 8990397 -80514156 + AluSx SINE Alu 1 312 0 363 250 77 10 chr17 8990811 8990915 -80513638 + MIR SINE MIR 71 181 -81 217 355 18 9 chr17 8991033 8991143 -80513410 + L2 LINE L2 2941 3051 -221 237 273 91 0 chr17 8991374 8991429 -80513124 + L2 LINE L2 3249 3308 -5 2193 107 0 0 chr17 8991706 8992006 -80512547 - AluSg SINE Alu -10 300 1 187 255 43 0 chr17 8992886 8992933 -80511620 + L2 LINE L2 3202 3250 -22 271 264 0 14 chr17 8995192 8995264 -80509289 - L2 LINE L2 -49 3223 3153 965 96 0 22 chr17 8997470 8997606 -80506947 - FLAM_C SINE Alu 0 133 1 239 281 0 0 chr17 8999475 8999532 -80505021 + MIR SINE MIR 206 262 0 2112 88 0 0 chr17 9002466 9002729 -80501824 + AluSg SINE Alu 33 295 -15 1107 183 18 9 chr17 9002733 9002957 -80501596 + L1MB7 LINE L1 5940 6165 -19 2269 105 0 13 chr17 9004110 9004425 -80500128 - AluSq SINE Alu -2 311 1 1730 197 53 26 chr17 9004750 9005167 -80499386 + MSTC LTR MaLR 1 428 0 1790 185 7 3 chr17 9005506 9005804 -80498749 - AluJo SINE Alu -13 299 1 2062 135 0 16 chr17 9005907 9006210 -80498343 - AluSx SINE Alu -14 298 1 204 231 41 99 chr17 9008655 9008776 -80495777 + L2 LINE L2 3137 3250 -22 226 283 17 0 chr17 9009222 9009282 -80495271 + L2 LINE L2 3168 3228 -44 2318 82 14 0 chr17 9009396 9009687 -80494866 - AluSg1 SINE Alu -14 295 1 484 255 31 46 chr17 9009933 9010129 -80494424 - L1MC4a LINE L1 -1926 5882 5690 458 346 42 4 chr17 9010159 9010399 -80494154 - L1MC4a LINE L1 -1610 4536 4288 356 285 242 29 chr17 9010881 9011323 -80493230 + L2 LINE L2 2781 3312 -1 2295 105 0 0 chr17 9011978 9012274 -80492279 - AluSx SINE Alu -16 296 1 1912 149 23 7 chr17 9012823 9013124 -80491429 - 7SLRNA srpRNA srpRNA -14 306 1 411 89 65 8 chr17 9013632 9013755 -80490798 + (TA)n Simple_repeat Simple_repeat 2 131 0 420 216 52 45 chr17 9013804 9013938 -80490615 + Charlie8 DNA MER1_type 87 221 -2196 210 37 0 0 chr17 9015611 9015638 -80488915 + (TCTCCC)n Simple_repeat Simple_repeat 3 29 0 6926 66 17 6 chr17 9015638 9017067 -80487486 + SVA Other Other 53 1380 -6 25 0 0 0 chr17 9017067 9017092 -80487461 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr17 9017712 9017743 -80486810 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr17 9018079 9018115 -80486438 + AT_rich Low_complexity Low_complexity 1 36 0 262 345 84 28 chr17 9018450 9018592 -80485961 - MIR SINE MIR -112 150 1 21 36 0 0 chr17 9020145 9020173 -80484380 + AT_rich Low_complexity Low_complexity 1 28 0 320 338 108 33 chr17 9020277 9020582 -80483971 + L1ME1 LINE L1 3364 3691 -2455 2194 104 0 10 chr17 9020584 9020883 -80483670 + AluSx SINE Alu 1 296 -16 971 73 0 0 chr17 9020926 9021049 -80483504 + AluSc SINE Alu 187 309 0 1846 223 40 29 chr17 9021182 9021733 -80482820 + L1ME1 LINE L1 4611 5167 -979 2489 234 50 18 chr17 9021842 9022565 -80481988 + L1ME1 LINE L1 5397 6142 -24 298 200 0 0 chr17 9022655 9022710 -80481843 + U6 snRNA snRNA 48 102 -5 194 79 0 26 chr17 9024290 9024328 -80480225 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 4523 182 74 19 chr17 9024482 9025619 -80478934 - Looper DNA T2_type -358 1200 1 237 196 0 0 chr17 9029692 9029743 -80474810 + A-rich Low_complexity Low_complexity 3 53 0 294 317 33 17 chr17 9030378 9030498 -80474055 + L2 LINE L2 3188 3309 -4 329 254 98 16 chr17 9030539 9030661 -80473892 - L2 LINE L2 -77 3236 3105 371 318 31 87 chr17 9030722 9031011 -80473542 - L2 LINE L2 -749 2565 2293 212 189 0 0 chr17 9031012 9031049 -80473504 + L2 LINE L2 3259 3295 -18 873 200 51 33 chr17 9031773 9031988 -80472565 - MER20 DNA MER1_type 0 219 1 1758 214 81 36 chr17 9032082 9032577 -80471976 + MLT1F LTR MaLR 26 542 0 1404 159 12 4 chr17 9033264 9033516 -80471037 + MLT1B LTR MaLR 1 254 -136 1150 247 47 14 chr17 9033648 9034008 -80470545 + MER87 LTR ERV1 168 539 -2 793 141 7 14 chr17 9034009 9034151 -80470402 + MLT1B LTR MaLR 250 390 0 295 211 0 0 chr17 9034730 9034782 -80469771 + AluJ/monomer SINE Alu 1 52 -250 2332 204 81 22 chr17 9034927 9036047 -80468506 + L1ME1 LINE L1 4330 5742 -424 1822 129 37 55 chr17 9036047 9036395 -80468158 + MER2 DNA MER2_type 3 344 0 2332 204 81 22 chr17 9036395 9036614 -80467939 + L1ME1 LINE L1 5742 5947 -219 2421 87 7 0 chr17 9036836 9037146 -80467407 - AluSp SINE Alu -1 312 1 2136 104 14 10 chr17 9037570 9037867 -80466686 - AluSx SINE Alu -14 298 1 216 214 0 0 chr17 9038046 9038102 -80466451 + GA-rich Low_complexity Low_complexity 4 59 0 322 229 43 0 chr17 9038529 9038599 -80465954 + HAL1 LINE L1 2030 2102 -405 343 116 0 29 chr17 9038707 9038776 -80465777 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 211 193 0 35 chr17 9038794 9038851 -80465702 + (TTTA)n Simple_repeat Simple_repeat 1 55 0 2114 107 7 23 chr17 9039036 9039336 -80465217 - AluSg SINE Alu -15 295 1 1171 77 0 6 chr17 9039399 9039555 -80464998 - AluY SINE Alu -12 299 145 398 288 131 76 chr17 9039990 9040129 -80464424 - L1M4 LINE L1 -3060 3086 2956 2100 141 0 0 chr17 9040129 9040426 -80464127 - AluJb SINE Alu -15 297 1 398 288 131 76 chr17 9040426 9040905 -80463648 - L1M4 LINE L1 -3190 2956 2434 323 188 62 0 chr17 9040909 9041005 -80463548 + L2 LINE L2 1301 1402 -1912 484 342 131 47 chr17 9041344 9042407 -80462146 - L2 LINE L2 -1908 1406 255 378 60 0 0 chr17 9043146 9043196 -80461357 - L2 LINE L2 0 3313 3264 233 309 29 91 chr17 9043283 9043398 -80461155 + L3 LINE CR1 636 738 -839 2260 93 0 10 chr17 9043398 9043699 -80460854 - AluY SINE Alu -13 298 1 233 309 29 91 chr17 9043699 9043758 -80460795 + L3 LINE CR1 738 799 -778 1155 139 0 48 chr17 9044036 9044245 -80460308 + AluJo SINE Alu 98 296 -16 287 329 100 7 chr17 9044341 9044481 -80460072 - MIR SINE MIR -18 244 92 284 200 78 0 chr17 9044513 9044603 -80459950 + Charlie5 DNA MER1_type 2508 2604 -8 1972 48 0 0 chr17 9046182 9046410 -80458143 - AluY SINE Alu -6 305 78 1745 102 91 18 chr17 9046514 9046799 -80457754 + AluY SINE Alu 1 306 -5 291 28 0 0 chr17 9047242 9047278 -80457275 + (TG)n Simple_repeat Simple_repeat 1 36 0 234 0 0 0 chr17 9047277 9047303 -80457250 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 225 240 27 67 chr17 9047347 9047422 -80457131 + L2 LINE L2 3201 3272 0 1168 82 38 43 chr17 9047438 9047622 -80456931 - MER30B DNA MER1_type -4 186 4 3353 162 59 12 chr17 9048872 9049551 -80455002 + L1MB8 LINE L1 5451 6161 -17 888 210 25 0 chr17 9050985 9051147 -80453406 - FRAM SINE Alu 0 166 1 28 0 0 0 chr17 9051149 9051177 -80453376 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 9051428 9051449 -80453104 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr17 9051509 9051539 -80453014 + AT_rich Low_complexity Low_complexity 1 30 0 26 50 0 0 chr17 9052435 9052475 -80452078 + AT_rich Low_complexity Low_complexity 1 40 0 2082 148 0 0 chr17 9052540 9052837 -80451716 - AluSx SINE Alu -15 297 1 1857 141 4 4 chr17 9053237 9053506 -80451047 - AluSx SINE Alu 0 312 44 1607 176 31 7 chr17 9054010 9054299 -80450254 + AluJo SINE Alu 1 296 -16 299 269 59 17 chr17 9054431 9054550 -80450003 + MIR3 SINE MIR 71 194 -14 1168 125 0 0 chr17 9054983 9055143 -80449410 + AluSg/x SINE Alu 134 293 -19 347 325 81 61 chr17 9055726 9056225 -80448328 - L2 LINE L2 0 3272 2761 207 217 67 0 chr17 9056653 9056713 -80447840 + MIR SINE MIR 114 177 -85 470 257 193 23 chr17 9056836 9057054 -80447499 + MIR SINE MIR 1 255 -7 194 125 0 25 chr17 9057070 9057110 -80447443 + (ATG)n Simple_repeat Simple_repeat 1 39 0 243 138 36 6 chr17 9058424 9058480 -80446073 - LTR29 LTR ERV1 -66 556 513 1477 201 95 22 chr17 9059354 9059763 -80444790 - LTR56 LTR ERV1 0 445 7 2274 99 3 0 chr17 9059837 9060148 -80444405 - AluSp SINE Alu 0 312 1 215 170 21 0 chr17 9060172 9060219 -80444334 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 305 311 0 0 chr17 9060227 9060317 -80444236 + L1MC4 LINE L1 6614 6703 -1339 207 0 0 0 chr17 9060317 9060340 -80444213 + (TA)n Simple_repeat Simple_repeat 1 23 0 319 96 164 45 chr17 9060350 9060447 -80444106 - LTR48B LTR ERV1 -38 749 499 317 225 110 38 chr17 9060706 9060872 -80443681 + L1ME2 LINE L1 5978 6154 -10 291 186 108 0 chr17 9061308 9061410 -80443143 + MER34 LTR ERV1 425 537 -5 329 275 75 0 chr17 9061443 9061563 -80442990 + L1MC4 LINE L1 7913 8041 -1 440 231 146 31 chr17 9062250 9062380 -80442173 + MLT1H LTR MaLR 405 549 0 961 324 109 31 chr17 9062438 9063733 -80440820 + L2 LINE L2 1328 2723 -591 361 314 35 30 chr17 9064418 9064587 -80439966 + MER5A DNA MER1_type 18 187 -2 402 236 14 56 chr17 9064900 9065044 -80439509 - MIR SINE MIR -108 154 17 2069 141 3 0 chr17 9065338 9065643 -80438910 - AluJb SINE Alu -6 306 1 2614 63 0 0 chr17 9065905 9066208 -80438345 - AluY SINE Alu -8 303 1 196 275 100 12 chr17 9066428 9066508 -80438045 + MIR SINE MIR 54 140 -68 3310 236 45 27 chr17 9067237 9067963 -80436590 + L1M4 LINE L1 3029 3782 -2364 459 0 0 0 chr17 9067963 9068014 -80436539 + (TA)n Simple_repeat Simple_repeat 1 51 0 3310 236 45 27 chr17 9068014 9068356 -80436197 + L1M4 LINE L1 3782 4116 -2030 1949 145 0 22 chr17 9068928 9069213 -80435340 + AluJo SINE Alu 1 280 -32 329 0 0 24 chr17 9069213 9069255 -80435298 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1949 145 0 22 chr17 9069255 9069287 -80435266 + AluJo SINE Alu 280 311 -1 274 257 18 55 chr17 9069675 9069784 -80434769 + L1ME4a LINE L1 5847 5951 -170 194 311 136 0 chr17 9069859 9069962 -80434591 + L2 LINE L2 3181 3297 -16 1107 175 28 0 chr17 9070417 9070628 -80433925 - MIR SINE MIR -23 239 23 207 69 0 0 chr17 9071977 9072006 -80432547 + (CACCC)n Simple_repeat Simple_repeat 3 31 0 408 254 129 40 chr17 9073162 9073363 -80431190 + MIR SINE MIR 38 256 -6 271 178 0 0 chr17 9073430 9073475 -80431078 - tRNA-Thr-ACT tRNA tRNA -32 45 1 601 258 107 24 chr17 9073481 9073772 -80430781 - L3 LINE CR1 -701 876 562 32 0 0 0 chr17 9075145 9075177 -80429376 + AT_rich Low_complexity Low_complexity 1 32 0 292 133 82 0 chr17 9075468 9075529 -80429024 - LTR41 LTR ERVL -2 793 712 185 289 13 40 chr17 9075635 9075711 -80428842 + MIR SINE MIR 109 182 -80 2073 165 36 65 chr17 9075760 9075903 -80428650 + Charlie1 DNA MER1_type 2207 2353 -408 2053 122 0 4 chr17 9075903 9076182 -80428371 + AluSg SINE Alu 1 278 -32 261 0 0 0 chr17 9076182 9076211 -80428342 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2073 165 36 65 chr17 9076211 9076586 -80427967 + Charlie1 DNA MER1_type 2351 2711 -50 185 357 12 0 chr17 9079153 9079237 -80425316 + L2 LINE L2 2898 2982 -290 2505 50 3 3 chr17 9079250 9079550 -80425003 - AluY SINE Alu -11 300 1 227 279 23 23 chr17 9080409 9080495 -80424058 + L1MC5 LINE L1 7132 7217 -744 189 0 0 0 chr17 9080711 9080732 -80423821 + (A)n Simple_repeat Simple_repeat 1 21 0 831 165 0 8 chr17 9080746 9080879 -80423674 + FLAM_C SINE Alu 1 132 -1 25 0 0 0 chr17 9081841 9081866 -80422687 + GC_rich Low_complexity Low_complexity 1 25 0 210 150 0 0 chr17 9082451 9082491 -80422062 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 24 0 0 0 chr17 9082699 9082723 -80421830 + AT_rich Low_complexity Low_complexity 1 24 0 309 151 0 0 chr17 9083364 9083417 -80421136 + (TA)n Simple_repeat Simple_repeat 1 53 0 2268 103 0 10 chr17 9083417 9083728 -80420825 - AluSc SINE Alu -1 308 1 348 98 34 28 chr17 9084552 9084661 -80419892 + L1MB8 LINE L1 5330 5440 -714 2300 105 0 0 chr17 9084665 9084961 -80419592 + AluSx SINE Alu 3 298 -14 185 0 40 0 chr17 9084991 9085016 -80419537 + (CAA)n Simple_repeat Simple_repeat 2 27 0 916 223 0 0 chr17 9085018 9085193 -80419360 + L1MB8 LINE L1 5433 5607 -577 883 116 31 0 chr17 9085236 9085365 -80419188 + AluSq/x SINE Alu 1 133 -179 315 211 157 64 chr17 9085391 9085595 -80418958 + L1MB8 LINE L1 5945 6167 -11 1955 93 12 0 chr17 9085628 9085876 -80418677 + AluSq SINE Alu 48 298 -15 1905 220 66 35 chr17 9085877 9086228 -80418325 + L1MB8 LINE L1 5599 5975 -203 2392 99 0 6 chr17 9086228 9086540 -80418013 + AluSg SINE Alu 1 310 0 1905 220 66 35 chr17 9086540 9086751 -80417802 + L1MB8 LINE L1 5975 6178 0 385 288 144 7 chr17 9086764 9086917 -80417636 + Charlie8 DNA MER1_type 104 277 -2140 2213 124 0 6 chr17 9086924 9087238 -80417315 - AluSx SINE Alu 0 312 1 1744 136 10 14 chr17 9087789 9088083 -80416470 + L1PB2 LINE L1 5858 6150 -1 2131 106 3 7 chr17 9088085 9088377 -80416176 + AluSx SINE Alu 1 291 -21 22 0 0 0 chr17 9088377 9088399 -80416154 + AT_rich Low_complexity Low_complexity 1 22 0 293 311 44 7 chr17 9088463 9088598 -80415955 - L2 LINE L2 -13 3300 3161 2363 80 3 0 chr17 9088912 9089199 -80415354 + AluSc SINE Alu 1 288 -21 441 0 0 0 chr17 9089199 9089248 -80415305 + (TA)n Simple_repeat Simple_repeat 1 49 0 380 313 38 84 chr17 9089261 9089711 -80414842 - L2 LINE L2 -343 2971 2543 1486 168 27 40 chr17 9089982 9090310 -80414243 - MER33 DNA MER1_type 0 324 1 313 242 15 0 chr17 9090346 9090412 -80414141 + L2 LINE L2 3201 3267 -5 785 163 6 0 chr17 9090421 9090599 -80413954 + (TGGA)n Simple_repeat Simple_repeat 2 180 0 456 213 11 6 chr17 9090641 9090815 -80413738 + (TGGA)n Simple_repeat Simple_repeat 4 178 0 482 209 7 85 chr17 9091727 9091810 -80412743 + MIR SINE MIR 81 149 -113 1554 167 3 60 chr17 9091810 9092199 -80412354 + AluJo SINE Alu 1 372 0 482 209 7 85 chr17 9092199 9092267 -80412286 + MIR SINE MIR 149 221 -41 2418 116 31 0 chr17 9092787 9093140 -80411413 + THE1B LTR MaLR 1 364 0 566 254 21 0 chr17 9093176 9093318 -80411235 + MIR SINE MIR 63 207 -55 1885 172 6 13 chr17 9093359 9093673 -80410880 - AluJo SINE Alu 0 312 1 1755 206 78 64 chr17 9093695 9094337 -80410216 + L1MC5 LINE L1 7308 7958 -3 1341 163 107 24 chr17 9094622 9094874 -80409679 + AluJb SINE Alu 1 273 -39 2329 143 30 21 chr17 9095336 9095763 -80408790 - L1MA6 LINE L1 0 6300 5870 2358 84 0 0 chr17 9095992 9096276 -80408277 - AluSx SINE Alu -24 288 5 1825 134 4 7 chr17 9097022 9097291 -80407262 - AluSx SINE Alu -44 268 1 2894 77 55 10 chr17 9097774 9098190 -80406363 + MLT2A1 LTR ERVL 1 435 -9 272 75 0 25 chr17 9098220 9098260 -80406293 + MLT2A2 LTR ERVL 415 453 0 2228 84 13 27 chr17 9098476 9098775 -80405778 - AluY SINE Alu -16 295 1 317 243 139 35 chr17 9099045 9099218 -80405335 - MIR3 SINE MIR 0 208 18 191 300 0 33 chr17 9099243 9099303 -80405250 - L2 LINE L2 -20 3293 3236 2291 98 10 0 chr17 9099595 9099892 -80404661 + AluSp SINE Alu 1 300 -13 276 248 118 34 chr17 9099984 9100170 -80404383 + MIR SINE MIR 14 260 -2 427 240 19 0 chr17 9100868 9100972 -80403581 - MIR SINE MIR 0 262 157 787 204 127 30 chr17 9100975 9101262 -80403291 - MLT1A2 LTR MaLR 0 374 1 2145 112 10 10 chr17 9101441 9101746 -80402807 + AluSq SINE Alu 1 305 -8 222 37 0 0 chr17 9101757 9101784 -80402769 + (A)n Simple_repeat Simple_repeat 1 27 0 711 232 34 58 chr17 9102463 9102756 -80401797 + L1MC5 LINE L1 5257 5542 -2266 1491 102 0 0 chr17 9102818 9103023 -80401530 - AluSg/x SINE Alu -4 306 102 698 260 29 10 chr17 9103023 9103227 -80401326 - Zaphod DNA AcHobo -3823 208 1 3227 215 93 81 chr17 9103230 9103306 -80401247 + L1MC5 LINE L1 5846 5920 -2041 1790 166 84 0 chr17 9103306 9103626 -80400927 + MER7A DNA MER2_type 1 345 -1 3227 215 93 81 chr17 9103626 9104253 -80400300 + L1MC5 LINE L1 5920 6538 -1423 2422 73 0 0 chr17 9104253 9104554 -80399999 + AluSg SINE Alu 1 301 -9 3227 215 93 81 chr17 9104554 9105433 -80399120 + L1MC5 LINE L1 6538 7405 -556 2036 125 0 10 chr17 9105433 9105736 -80398817 + AluSx SINE Alu 1 300 -12 1905 152 0 29 chr17 9105739 9106087 -80398466 + MER44D DNA MER2_type 1 608 -1 3227 215 93 81 chr17 9106087 9106304 -80398249 + L1MC5 LINE L1 7406 7692 -269 1365 191 0 0 chr17 9106305 9106546 -80398007 - AluJb SINE Alu -14 298 58 594 147 96 6 chr17 9106556 9106712 -80397841 + L1MC5 LINE L1 7681 7850 -111 668 183 15 23 chr17 9107038 9107169 -80397384 + L2 LINE L2 3182 3311 -2 1751 234 97 21 chr17 9107242 9107692 -80396861 + MLT1H1 LTR MaLR 1 496 -59 1668 159 14 3 chr17 9107692 9107988 -80396565 + AluJo SINE Alu 1 299 -13 1751 234 97 21 chr17 9107988 9108053 -80396500 + MLT1H1 LTR MaLR 496 555 0 257 339 49 81 chr17 9108349 9108640 -80395913 + L2 LINE L2 2935 3215 -57 2216 92 0 7 chr17 9108640 9108943 -80395610 + AluY SINE Alu 1 301 -10 257 339 49 81 chr17 9108943 9108996 -80395557 + L2 LINE L2 3215 3268 -4 268 164 29 173 chr17 9109076 9109180 -80395373 + MIR SINE MIR 104 192 -70 1382 266 64 37 chr17 9109558 9110072 -80394481 - MLT1K LTR MaLR -51 537 10 527 233 52 70 chr17 9110490 9110560 -80393993 + MLT1K LTR MaLR 420 490 -98 2271 184 22 11 chr17 9110560 9111022 -80393531 + MLT1C LTR MaLR 1 467 0 527 233 52 70 chr17 9111022 9111123 -80393430 + MLT1K LTR MaLR 490 588 0 201 283 75 0 chr17 9111132 9111185 -80393368 - L2 LINE L2 -47 3225 3169 1093 98 11 6 chr17 9111479 9111653 -80392900 + (TTCC)n Simple_repeat Simple_repeat 2 176 0 510 118 29 10 chr17 9111665 9111767 -80392786 + CT-rich Low_complexity Low_complexity 4 107 0 228 125 0 0 chr17 9111774 9111806 -80392747 + (TC)n Simple_repeat Simple_repeat 1 32 0 1828 155 3 0 chr17 9111806 9112097 -80392456 - AluJb SINE Alu -20 292 1 214 358 74 34 chr17 9112162 9112288 -80392265 + L2 LINE L2 2866 3002 -270 2018 200 40 15 chr17 9112288 9112744 -80391809 - MLT1C LTR MaLR 0 467 1 214 358 74 34 chr17 9112744 9112793 -80391760 + L2 LINE L2 3002 3048 -224 190 317 17 0 chr17 9112894 9112954 -80391599 - MIR SINE MIR -180 82 22 1625 171 13 29 chr17 9112988 9113304 -80391249 + AluJo SINE Alu 1 311 -1 515 146 21 0 chr17 9113304 9113400 -80391153 + GA-rich Low_complexity Low_complexity 2 99 0 964 305 57 9 chr17 9114449 9114767 -80389786 + MLT1I LTR MaLR 59 391 -18 592 285 28 0 chr17 9114771 9114915 -80389638 - MIR SINE MIR -102 160 13 2122 92 27 0 chr17 9115097 9115391 -80389162 + AluSg SINE Alu 1 302 -8 2265 86 0 0 chr17 9115869 9116161 -80388392 - AluSc SINE Alu -16 293 2 474 291 47 0 chr17 9116255 9116269 -80388284 - L1MA10 LINE L1 0 6334 6321 468 305 30 11 chr17 9116269 9116525 -80388028 - L1ME1 LINE L1 -5 6161 5850 2155 84 17 7 chr17 9117103 9117400 -80387153 + AluSg SINE Alu 1 300 -10 908 98 13 173 chr17 9117865 9117963 -80386590 + MER53 DNA DNA 1 45 -144 2174 98 0 0 chr17 9117963 9118249 -80386304 - AluSg SINE Alu -24 286 1 908 98 13 173 chr17 9118249 9118375 -80386178 + MER53 DNA DNA 44 189 0 3483 158 42 56 chr17 9118714 9119402 -80385151 - L1MA7 LINE L1 0 6291 5614 2241 85 13 0 chr17 9119402 9119707 -80384846 - AluSp SINE Alu -4 309 1 3483 158 42 56 chr17 9119707 9119780 -80384773 - L1MA7 LINE L1 -677 5614 5541 420 134 0 0 chr17 9120732 9120814 -80383739 - AluSc SINE Alu 0 309 228 261 0 0 0 chr17 9120833 9120862 -80383691 + (TA)n Simple_repeat Simple_repeat 1 29 0 1939 107 41 0 chr17 9120873 9121163 -80383390 + AluSx SINE Alu 1 302 -10 1324 83 12 132 chr17 9121177 9121227 -80383326 - Tigger2a DNA MER2_type -2465 253 199 668 241 80 0 chr17 9121227 9121389 -80383164 + FAM SINE Alu 1 175 0 1324 83 12 132 chr17 9121389 9121616 -80382937 - Tigger2a DNA MER2_type -2519 199 1 2050 71 45 0 chr17 9121981 9122277 -80382276 - AluY SINE Alu 0 308 1 2609 168 86 19 chr17 9122330 9122855 -80381698 + L1MB3 LINE L1 5617 6176 -7 317 273 68 30 chr17 9122908 9122943 -80381610 - MER103 DNA DNA -11 155 123 288 0 0 0 chr17 9122943 9122975 -80381578 + (CA)n Simple_repeat Simple_repeat 2 33 0 317 273 68 30 chr17 9122975 9123071 -80381482 - MER103 DNA DNA -43 123 19 323 222 26 104 chr17 9123274 9123419 -80381134 - MIR SINE MIR -62 146 30 337 340 47 20 chr17 9123712 9123862 -80380691 - MER5A DNA MER1_type -24 165 1 218 330 18 46 chr17 9123871 9123980 -80380573 - MIR3 SINE MIR -27 181 76 327 257 102 136 chr17 9124836 9125042 -80379511 + MIR SINE MIR 20 218 -44 1313 142 0 5 chr17 9125282 9125493 -80379060 - AluJb SINE Alu -19 293 84 239 95 48 0 chr17 9125526 9125568 -80378985 + T-rich Low_complexity Low_complexity 4 47 0 1465 139 13 0 chr17 9125578 9125815 -80378738 - AluSg/x SINE Alu 0 310 71 496 246 58 105 chr17 9125841 9125952 -80378601 - L1ME LINE L1 -527 5594 5479 1648 112 164 6 chr17 9125952 9126264 -80378289 - MER46B DNA MER2_type 0 236 1 2021 107 52 0 chr17 9126273 9126564 -80377989 - AluSx SINE Alu -6 306 1 496 246 58 105 chr17 9126564 9126699 -80377854 - L1ME LINE L1 -650 5471 5354 2103 117 3 0 chr17 9126699 9126999 -80377554 - AluSq SINE Alu -12 301 1 496 246 58 105 chr17 9126999 9127066 -80377487 - L1ME LINE L1 -767 5354 5285 352 292 169 51 chr17 9127099 9127335 -80377218 - L1ME LINE L1 -852 5294 5031 785 193 28 40 chr17 9127390 9127566 -80376987 - MER3 DNA MER1_type -82 127 1 453 371 42 24 chr17 9127630 9127918 -80376635 - L1ME LINE L1 -1215 4931 4639 299 323 96 76 chr17 9128092 9128383 -80376170 + L2 LINE L2 2971 3267 -5 791 220 18 26 chr17 9128835 9129028 -80375525 + MIR SINE MIR 69 257 -5 1526 122 122 7 chr17 9129028 9129298 -80375255 - AluSg SINE Alu -9 301 1 2374 50 10 0 chr17 9131319 9131619 -80372934 - AluY SINE Alu -8 303 1 4999 68 6 6 chr17 9131739 9132385 -80372168 - L1PA7 LINE L1 0 6154 5509 21 36 0 0 chr17 9132429 9132457 -80372096 + AT_rich Low_complexity Low_complexity 1 28 0 1459 144 20 78 chr17 9132457 9132763 -80371790 - AluJo SINE Alu -24 288 1 743 215 151 13 chr17 9133142 9133429 -80371124 + L1MD3 LINE L1 7238 7484 -511 2011 112 0 0 chr17 9133429 9133705 -80370848 + AluSx SINE Alu 6 281 -31 743 215 151 13 chr17 9133705 9134057 -80370496 + L1MD3 LINE L1 7484 7984 -11 1569 53 0 0 chr17 9134224 9134413 -80370140 - AluSc SINE Alu -5 304 116 1823 60 0 4 chr17 9134414 9134648 -80369905 + AluY SINE Alu 79 311 0 2213 63 18 3 chr17 9134944 9135229 -80369324 + AluY SINE Alu 1 289 -22 1996 117 7 13 chr17 9135662 9135961 -80368592 - AluSx SINE Alu -15 297 1 2021 265 11 40 chr17 9135987 9136541 -80368012 - MER115 DNA AcHobo -5 688 151 425 170 9 38 chr17 9136559 9136665 -80367888 + C-rich Low_complexity Low_complexity 5 107 0 849 142 23 20 chr17 9136780 9137136 -80367417 + C-rich Low_complexity Low_complexity 1 357 0 696 316 22 4 chr17 9137230 9137499 -80367054 - L1M4 LINE L1 -2283 3863 3590 300 285 61 79 chr17 9137527 9137741 -80366812 - L1ME4a LINE L1 -12 6109 5900 286 133 56 33 chr17 9137767 9137857 -80366696 + CT-rich Low_complexity Low_complexity 2 93 0 925 146 38 195 chr17 9137859 9137877 -80366676 - AluJb SINE Alu -1 311 292 1903 158 7 0 chr17 9137877 9138187 -80366366 - AluSx SINE Alu 0 312 1 925 146 38 195 chr17 9138187 9138537 -80366016 - AluJb SINE Alu -20 292 1 271 271 54 42 chr17 9138548 9138714 -80365839 - L1ME4a LINE L1 -1926 5882 5715 509 230 54 108 chr17 9138714 9138936 -80365617 + L2 LINE L2 3104 3313 0 359 303 45 84 chr17 9138944 9139197 -80365356 - L1ME4a LINE L1 -421 5700 5439 971 161 6 12 chr17 9139197 9139358 -80365195 + FRAM SINE Alu 4 163 -3 2000 92 4 7 chr17 9139366 9139647 -80364906 + AluSx SINE Alu 1 280 -32 359 303 45 84 chr17 9139647 9139928 -80364625 - L1ME4a LINE L1 -689 5432 5175 2523 56 0 0 chr17 9140072 9140378 -80364175 - AluY SINE Alu -5 306 1 1471 161 80 18 chr17 9140786 9141060 -80363493 - AluJb SINE Alu -10 292 2 25 0 0 0 chr17 9141207 9141232 -80363321 + AT_rich Low_complexity Low_complexity 1 25 0 530 282 29 18 chr17 9141277 9141447 -80363106 + MER5B DNA MER1_type 1 172 -6 540 264 109 33 chr17 9141481 9141849 -80362704 + L1MC5 LINE L1 7371 7766 -195 2305 81 7 0 chr17 9141850 9142158 -80362395 + AluSx SINE Alu 3 312 0 1059 123 12 0 chr17 9142158 9142320 -80362233 + AluSg/x SINE Alu 131 294 -18 293 262 92 14 chr17 9142366 9142507 -80362046 + L1MC4 LINE L1 7891 8042 0 1803 167 0 3 chr17 9143013 9143325 -80361228 + AluJb SINE Alu 1 311 -1 2398 84 6 0 chr17 9143978 9144289 -80360264 - AluSq SINE Alu 0 313 1 469 277 0 0 chr17 9144785 9144897 -80359656 + MIR SINE MIR 48 159 -103 2047 117 0 10 chr17 9145055 9145355 -80359198 + AluSx SINE Alu 3 299 -13 280 266 130 32 chr17 9145563 9145717 -80358836 + MER5B DNA MER1_type 10 178 0 206 170 21 0 chr17 9146021 9146068 -80358485 - L2 LINE L2 -1035 2279 2232 297 0 0 0 chr17 9147436 9147469 -80357084 + (CA)n Simple_repeat Simple_repeat 2 34 0 225 289 109 57 chr17 9147683 9147894 -80356659 - L2 LINE L2 -195 3077 2856 211 256 0 0 chr17 9148021 9148060 -80356493 + (CG)n Simple_repeat Simple_repeat 1 39 0 525 257 46 20 chr17 9148805 9148981 -80355572 - MLT1F LTR MaLR -376 191 1 369 118 0 0 chr17 9148981 9149031 -80355522 + MLT1F LTR MaLR 493 542 0 2094 102 0 0 chr17 9149151 9149484 -80355069 - AluSq SINE Alu 0 333 1 373 284 9 9 chr17 9150104 9150213 -80354340 + L2 LINE L2 3200 3308 -5 423 326 182 16 chr17 9150466 9150954 -80353599 + L2 LINE L2 1616 2184 -1130 1392 129 5 0 chr17 9150972 9151181 -80353372 - AluJb SINE Alu -17 295 86 360 254 161 51 chr17 9151305 9151522 -80353031 + MLT1I LTR MaLR 122 362 -47 195 100 0 0 chr17 9151524 9151554 -80352999 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 714 272 0 0 chr17 9151554 9151727 -80352826 - L1M4 LINE L1 -2463 3683 3511 193 93 0 47 chr17 9151729 9151772 -80352781 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 413 160 29 163 chr17 9151777 9151871 -80352682 - L1MA9 LINE L1 -7 6305 6253 1178 57 0 86 chr17 9151871 9152046 -80352507 - L1PA7 LINE L1 -7 6147 5988 413 160 29 163 chr17 9152046 9152160 -80352393 - L1MA9 LINE L1 -59 6253 6125 * 2269 213 118 34 chr17 9152154 9152355 -80352198 - L1M4 LINE L1 -2614 3532 3349 4712 138 96 59 chr17 9152355 9153339 -80351214 - LTR28 LTR ERV1 0 1020 1 2269 213 118 34 chr17 9153339 9154012 -80350541 - L1M4 LINE L1 -2797 3349 2585 1181 275 119 43 chr17 9154062 9154294 -80350259 + L2 LINE L2 2236 2449 -865 2373 93 17 0 chr17 9154294 9154584 -80349969 - AluSx SINE Alu -17 295 1 1181 275 119 43 chr17 9154584 9155041 -80349512 + L2 LINE L2 2449 2977 -337 2306 99 3 0 chr17 9155090 9155382 -80349171 - AluSq SINE Alu -20 293 1 338 260 0 0 chr17 9155441 9155514 -80349039 - LTR16B LTR ERVL 0 464 392 274 351 8 15 chr17 9155520 9155651 -80348902 - LTR16B LTR ERVL -285 179 50 452 261 21 28 chr17 9156477 9156619 -80347934 + MIR SINE MIR 17 157 -105 320 125 0 0 chr17 9156681 9156729 -80347824 - MER103 DNA DNA -66 100 53 436 287 25 25 chr17 9157071 9157228 -80347325 - MIR3 SINE MIR -3 205 49 2611 53 0 0 chr17 9158021 9158321 -80346232 + AluY SINE Alu 1 300 -11 212 270 95 0 chr17 9158807 9158881 -80345672 + MIR SINE MIR 61 141 -121 2245 92 0 57 chr17 9158891 9159208 -80345345 + AluY SINE Alu 1 299 -12 309 345 31 21 chr17 9159332 9159526 -80345027 + L2 LINE L2 2667 2862 -452 2151 165 15 5 chr17 9159530 9159929 -80344624 + MER57A LTR ERV1 1 403 0 211 214 0 0 chr17 9160057 9160099 -80344454 + MIR SINE MIR 70 111 -151 831 292 154 23 chr17 9160111 9160591 -80343962 + MLT1H LTR MaLR 7 549 0 544 236 8 8 chr17 9160594 9160717 -80343836 + MIR SINE MIR 126 248 -14 225 246 82 16 chr17 9160761 9160822 -80343731 + L2 LINE L2 3188 3252 -20 2280 99 7 3 chr17 9161065 9161359 -80343194 + AluSc SINE Alu 1 295 -14 2091 104 57 0 chr17 9161525 9161804 -80342749 - AluSx SINE Alu -17 295 1 346 308 15 23 chr17 9163052 9163185 -80341368 + MIR SINE MIR 129 260 -2 653 191 0 0 chr17 9163219 9163334 -80341219 + FLAM_A SINE Alu 1 115 -18 920 244 122 70 chr17 9163640 9163755 -80340798 - L2 LINE L2 -1 3312 3204 261 0 0 0 chr17 9163755 9163784 -80340769 + (TG)n Simple_repeat Simple_repeat 1 29 0 2288 71 14 0 chr17 9163785 9164067 -80340486 - AluY SINE Alu -25 286 1 920 244 122 70 chr17 9164067 9164493 -80340060 - L2 LINE L2 -108 3205 2736 1046 229 34 38 chr17 9164605 9164898 -80339655 + MLT1A2 LTR MaLR 1 292 -82 302 279 0 0 chr17 9164923 9165002 -80339551 + L1MC4 LINE L1 7822 7900 -142 1655 179 56 24 chr17 9165031 9165406 -80339147 + MLT1B LTR MaLR 1 387 -3 1687 228 63 31 chr17 9165407 9165464 -80339089 - MLT1F1 LTR MaLR -16 551 497 2198 116 3 0 chr17 9165464 9165756 -80338797 - AluSx SINE Alu -19 293 1 1687 228 63 31 chr17 9165756 9165917 -80338636 - MLT1F1 LTR MaLR -70 497 343 1934 127 3 7 chr17 9165917 9166201 -80338352 + AluSq SINE Alu 1 283 -30 282 29 0 0 chr17 9166204 9166239 -80338314 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1687 228 63 31 chr17 9166239 9166493 -80338060 - MLT1F1 LTR MaLR -225 342 59 6022 121 32 57 chr17 9166495 9168079 -80336474 - pTR5 LTR ERV1 0 2438 743 2270 123 0 0 chr17 9168627 9168928 -80335625 - AluSx SINE Alu -11 301 1 615 200 50 14 chr17 9169071 9169211 -80335342 - MIR SINE MIR -32 230 86 594 205 53 78 chr17 9169804 9169963 -80334590 + LTR37A LTR ERV1 189 341 -85 2206 129 0 10 chr17 9169963 9170273 -80334280 - AluSx SINE Alu -4 308 2 594 205 53 78 chr17 9170273 9170357 -80334196 + LTR37A LTR ERV1 341 426 0 273 340 0 10 chr17 9170383 9170486 -80334067 + L2 LINE L2 2640 2741 -573 1740 138 15 67 chr17 9170910 9171237 -80333316 + AluJb SINE Alu 2 311 -1 330 267 141 30 chr17 9171237 9171372 -80333181 + L2 LINE L2 2741 2890 -424 256 372 35 0 chr17 9171655 9171768 -80332785 + L2 LINE L2 3134 3250 -22 2501 58 0 29 chr17 9171774 9172083 -80332470 - AluY SINE Alu -11 300 1 2588 169 40 33 chr17 9172159 9172758 -80331795 + L1MB7 LINE L1 5573 6175 -9 2530 69 0 0 chr17 9172759 9173062 -80331491 - AluY SINE Alu -8 303 1 1803 156 45 7 chr17 9173342 9173630 -80330923 - AluJo SINE Alu -13 299 1 1894 217 70 4 chr17 9173790 9174250 -80330303 + MLT1E2 LTR MaLR 137 626 0 1734 236 29 87 chr17 9176526 9177179 -80327374 + MLT2F LTR ERVL 3 617 -46 638 109 46 17 chr17 9177201 9177376 -80327177 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 401 80 100 13 chr17 9177396 9177546 -80327007 + (TCTA)n Simple_repeat Simple_repeat 3 165 0 720 89 0 0 chr17 9177546 9177647 -80326906 + (TCCA)n Simple_repeat Simple_repeat 3 103 0 435 19 0 0 chr17 9177647 9177699 -80326854 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 1006 158 27 0 chr17 9177802 9177986 -80326567 - MER5A DNA MER1_type 0 189 1 540 336 0 0 chr17 9178426 9178572 -80325981 - L3 LINE CR1 -719 858 713 312 255 69 44 chr17 9178774 9178795 -80325758 + L1M4 LINE L1 1230 1249 -5395 2105 98 46 0 chr17 9178795 9179080 -80325473 + AluSq SINE Alu 16 313 0 312 255 69 44 chr17 9179080 9179205 -80325348 + L1M4 LINE L1 1249 3695 -2949 2163 133 0 13 chr17 9179820 9180135 -80324418 - AluSx SINE Alu -1 311 1 267 213 21 117 chr17 9180577 9180671 -80323882 + MIR3 SINE MIR 88 172 -36 4707 106 13 4 chr17 9180680 9181379 -80323174 + L1PA13 LINE L1 5418 6122 -41 1201 59 0 0 chr17 9181381 9181516 -80323037 + AluY SINE Alu 1 135 -176 2768 26 3 0 chr17 9181517 9181822 -80322731 + AluY SINE Alu 1 306 -5 22 0 0 0 chr17 9181844 9181866 -80322687 + AT_rich Low_complexity Low_complexity 1 22 0 274 286 0 0 chr17 9181974 9182051 -80322502 - MIR SINE MIR -105 157 81 2320 88 7 0 chr17 9183004 9183287 -80321266 - AluSq SINE Alu -28 285 1 1780 194 53 45 chr17 9183358 9183827 -80320726 + Charlie1b DNA MER1_type 19 491 -32 636 100 0 0 chr17 9184064 9184154 -80320399 - AluS SINE Alu -222 91 2 449 180 56 0 chr17 9184155 9184244 -80320309 - MER113 DNA MER1_type? -203 318 225 722 232 73 6 chr17 9184319 9184496 -80320057 + MER5A DNA MER1_type 1 189 0 258 81 0 0 chr17 9184793 9184830 -80319723 + (TG)n Simple_repeat Simple_repeat 1 37 0 23 0 0 0 chr17 9184861 9184884 -80319669 + GC_rich Low_complexity Low_complexity 1 23 0 504 229 39 50 chr17 9185343 9185522 -80319031 - MER5B DNA MER1_type -1 177 1 262 319 18 98 chr17 9185564 9185727 -80318826 - L2 LINE L2 -8 3264 3115 459 209 5 53 chr17 9186409 9186596 -80317957 + GA-rich Low_complexity Low_complexity 3 180 0 560 185 105 136 chr17 9186776 9187100 -80317453 + L1MC5 LINE L1 6835 7148 -813 506 182 31 8 chr17 9187117 9187233 -80317320 - L1ME3 LINE L1 -177 5985 5883 * 708 234 99 73 chr17 9187228 9187333 -80317220 + L1MC5 LINE L1 7513 7614 -347 1764 165 0 34 chr17 9187333 9187624 -80316929 - AluJb SINE Alu -31 281 1 708 234 99 73 chr17 9187624 9187903 -80316650 + L1MC5 LINE L1 7614 7907 -54 2500 73 0 3 chr17 9187963 9188263 -80316290 - AluSg SINE Alu -11 299 1 227 282 119 30 chr17 9188611 9188813 -80315740 - L2 LINE L2 -639 2675 2456 2459 94 0 0 chr17 9189034 9189341 -80315212 - AluSq SINE Alu -6 307 1 2325 69 10 3 chr17 9189721 9190010 -80314543 + AluSq SINE Alu 15 305 -8 362 331 28 17 chr17 9190299 9190477 -80314076 + MIR SINE MIR 63 242 -20 266 293 16 8 chr17 9190598 9190721 -80313832 + (CA)n Simple_repeat Simple_repeat 2 125 0 315 348 56 28 chr17 9192186 9192364 -80312189 - MER5A DNA MER1_type 0 189 7 180 77 0 0 chr17 9192826 9192852 -80311701 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 2449 87 0 0 chr17 9194872 9195181 -80309372 - AluSx SINE Alu -3 309 1 279 54 0 0 chr17 9196330 9196367 -80308186 + (TTCCC)n Simple_repeat Simple_repeat 4 40 0 333 187 47 65 chr17 9196510 9196589 -80307964 + Tigger2 DNA MER2_type 2614 2692 -26 181 0 33 33 chr17 9196589 9196619 -80307934 + (CCCCCG)n Simple_repeat Simple_repeat 4 33 0 333 187 47 65 chr17 9196619 9196646 -80307907 + Tigger2 DNA MER2_type 2692 2718 0 2375 93 3 10 chr17 9197307 9197619 -80306934 + AluSg SINE Alu 1 310 0 3308 163 38 52 chr17 9198574 9198647 -80305906 + L1MA7 LINE L1 5541 5614 -677 2403 88 13 0 chr17 9198647 9198953 -80305600 + AluSp SINE Alu 1 310 -3 3308 163 38 52 chr17 9198953 9199641 -80304912 + L1MA7 LINE L1 5614 6291 0 927 99 14 127 chr17 9199980 9200106 -80304447 - MER53 DNA DNA 0 189 95 2308 111 0 0 chr17 9200106 9200404 -80304149 + AluSg SINE Alu 1 298 -12 927 99 14 127 chr17 9200404 9200490 -80304063 - MER53 DNA DNA -94 95 1 2297 81 17 10 chr17 9200955 9201252 -80303301 - AluSg SINE Alu -11 299 1 489 298 28 18 chr17 9201814 9202087 -80302466 + L1ME1 LINE L1 5835 6161 -5 2417 86 0 0 chr17 9202195 9202487 -80302066 + AluSc SINE Alu 2 293 -16 2245 99 27 0 chr17 9202965 9203259 -80301294 - AluSg SINE Alu -8 302 1 592 285 28 0 chr17 9203441 9203585 -80300968 + MIR SINE MIR 13 160 -102 964 305 57 9 chr17 9203589 9203907 -80300646 - MLT1I LTR MaLR -18 391 59 1605 174 13 29 chr17 9204946 9205360 -80299193 - AluJo SINE Alu 0 409 1 190 317 17 0 chr17 9205394 9205454 -80299099 + MIR SINE MIR 22 82 -180 230 352 74 34 chr17 9205555 9205604 -80298949 - L2 LINE L2 -224 3048 3002 2018 200 40 15 chr17 9205604 9206060 -80298493 + MLT1C LTR MaLR 1 467 0 230 352 74 34 chr17 9206060 9206186 -80298367 - L2 LINE L2 -270 3002 2866 1828 155 3 0 chr17 9206251 9206542 -80298011 + AluJb SINE Alu 1 292 -20 228 125 0 0 chr17 9206542 9206574 -80297979 + (GA)n Simple_repeat Simple_repeat 1 32 0 474 122 31 10 chr17 9206581 9206679 -80297874 + GA-rich Low_complexity Low_complexity 4 103 0 1232 88 0 6 chr17 9206700 9206881 -80297672 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 201 283 75 0 chr17 9207175 9207228 -80297325 + L2 LINE L2 3169 3225 -47 527 233 52 70 chr17 9207237 9207338 -80297215 - MLT1K LTR MaLR 0 588 490 2271 184 22 11 chr17 9207338 9207800 -80296753 - MLT1C LTR MaLR 0 467 1 527 233 52 70 chr17 9207800 9207870 -80296683 - MLT1K LTR MaLR -98 490 420 1382 266 64 37 chr17 9208288 9208802 -80295751 + MLT1K LTR MaLR 10 537 -51 268 164 29 173 chr17 9209180 9209284 -80295269 - MIR SINE MIR -70 192 104 244 342 49 81 chr17 9209364 9209417 -80295136 - L2 LINE L2 -4 3268 3215 2216 92 0 7 chr17 9209417 9209720 -80294833 - AluY SINE Alu -10 301 1 244 342 49 81 chr17 9209720 9210011 -80294542 - L2 LINE L2 -57 3215 2935 1741 234 97 21 chr17 9210306 9210371 -80294182 - MLT1H1 LTR MaLR 0 555 496 1668 159 14 3 chr17 9210371 9210667 -80293886 - AluJo SINE Alu -13 299 1 1741 234 97 21 chr17 9210667 9211117 -80293436 - MLT1H1 LTR MaLR -59 496 1 668 183 15 23 chr17 9211190 9211321 -80293232 - L2 LINE L2 -2 3311 3182 594 147 96 6 chr17 9211647 9211803 -80292750 - L1MC5 LINE L1 -111 7850 7681 1365 191 0 0 chr17 9211813 9212054 -80292499 + AluJb SINE Alu 58 298 -14 429 190 156 83 chr17 9212055 9212260 -80292293 - L1MC5 LINE L1 -269 7692 7473 1893 155 0 29 chr17 9212272 9212620 -80291933 - MER44D DNA MER2_type -1 608 1 1232 114 5 35 chr17 9212623 9212824 -80291729 - AluSg/x SINE Alu -12 300 106 410 268 99 23 chr17 9213026 9213226 -80291327 - MIR SINE MIR -49 213 8 274 294 24 12 chr17 9213670 9213755 -80290798 - L2 LINE L2 -1 3271 3186 441 308 38 25 chr17 9213867 9214026 -80290527 + MIR SINE MIR 13 173 -89 960 96 0 15 chr17 9214730 9214865 -80289688 - FLAM_C SINE Alu 0 133 1 250 118 20 39 chr17 9216406 9216457 -80288096 - L2 LINE L2 -22 3250 3201 445 299 33 33 chr17 9216465 9216649 -80287904 + MIR3 SINE MIR 20 203 -5 2170 107 3 3 chr17 9216662 9216962 -80287591 + AluSp SINE Alu 1 300 -13 251 259 0 0 chr17 9217067 9217125 -80287428 - MIR3 SINE MIR -4 204 147 291 331 16 24 chr17 9217174 9217298 -80287255 + MARNA DNA Mariner 81 203 -383 311 317 61 43 chr17 9217437 9217601 -80286952 + HAL1b LINE L1 498 664 -684 1223 307 92 57 chr17 9217682 9218640 -80285913 + L1M4 LINE L1 4304 5294 -852 815 252 25 80 chr17 9218683 9218957 -80285596 + MIR SINE MIR 2 260 -2 4066 57 2 2 chr17 9218970 9219479 -80285074 + L1PA8 LINE L1 5660 6168 -4 265 247 26 26 chr17 9220022 9220099 -80284454 + MIR SINE MIR 60 136 -72 661 53 21 0 chr17 9220399 9220493 -80284060 + (GA)n Simple_repeat Simple_repeat 1 96 0 565 279 32 20 chr17 9220866 9221067 -80283486 + MIR SINE MIR 1 208 -54 629 218 0 5 chr17 9221748 9222340 -80282213 + (CA)n Simple_repeat Simple_repeat 1 588 0 878 302 20 24 chr17 9223200 9223455 -80281098 - MIR SINE MIR -6 256 3 2310 72 0 10 chr17 9223537 9223844 -80280709 + AluY SINE Alu 1 304 -7 1270 103 0 0 chr17 9223856 9224030 -80280523 + AluJb SINE Alu 134 307 -5 838 199 4 108 chr17 9224779 9225010 -80279543 + MIR SINE MIR 36 242 -20 1950 91 12 75 chr17 9225048 9225379 -80279174 - AluSx SINE Alu -2 310 1 373 241 0 36 chr17 9226043 9226126 -80278427 + L2 LINE L2 3185 3264 -49 261 200 20 0 chr17 9226131 9226181 -80278372 - L2 LINE L2 -38 3275 3225 251 239 45 102 chr17 9226178 9226217 -80278336 - L2 LINE L2 -248 3065 3025 * 2258 91 0 3 chr17 9226217 9226515 -80278038 - AluSc SINE Alu -12 297 1 251 239 45 102 chr17 9226515 9226563 -80277990 - L2 LINE L2 -288 3025 2983 1151 206 3 57 chr17 9226782 9226950 -80277603 + L1M4 LINE L1 2626 2773 -3373 2225 91 0 0 chr17 9226950 9227247 -80277306 - AluSx SINE Alu -15 297 1 1151 206 3 57 chr17 9227247 9227374 -80277179 + L1M4 LINE L1 2773 2905 -3241 1152 125 0 27 chr17 9228772 9228956 -80275597 + FRAM SINE Alu 1 176 0 1365 82 6 0 chr17 9229322 9229505 -80275048 - AluSp SINE Alu -129 184 1 514 158 0 0 chr17 9229505 9229674 -80274879 - L1M4 LINE L1 -1763 4383 4185 240 171 0 0 chr17 9229674 9229708 -80274845 - MLT1C LTR MaLR 0 467 434 388 118 0 0 chr17 9229708 9229759 -80274794 - Tigger5 DNA MER2_type 0 2323 2273 2240 93 0 10 chr17 9229767 9230069 -80274484 - AluSx SINE Alu -13 299 1 1622 238 36 19 chr17 9230104 9230566 -80273987 - MLT1C LTR MaLR -33 593 11 231 229 0 0 chr17 9230689 9230750 -80273803 + C-rich Low_complexity Low_complexity 5 65 0 229 339 12 24 chr17 9230760 9230925 -80273628 + L1M4 LINE L1 4497 4659 -1487 294 282 49 14 chr17 9231232 9231374 -80273179 + L1M4 LINE L1 4801 4947 -1199 1232 222 43 49 chr17 9231633 9231683 -80272870 + MLT1A1 LTR MaLR 1 50 -315 2483 106 17 0 chr17 9231683 9232032 -80272521 - THE1A LTR MaLR 0 355 1 1232 222 43 49 chr17 9232032 9232310 -80272243 + MLT1A1 LTR MaLR 50 327 -38 844 159 53 0 chr17 9232306 9232457 -80272096 + MLT1A1 LTR MaLR 207 365 0 * 289 185 96 25 chr17 9232457 9232642 -80271911 - L1MC/D LINE L1 -761 5410 5254 1743 141 7 33 chr17 9232956 9233126 -80271427 - AluJb SINE Alu -16 296 136 2057 94 0 24 chr17 9233126 9233424 -80271129 - AluSc SINE Alu -18 291 1 1743 141 7 33 chr17 9233424 9233557 -80270996 - AluJb SINE Alu -176 136 1 1717 127 0 0 chr17 9233973 9234225 -80270328 + AluSq SINE Alu 9 260 -53 207 0 0 0 chr17 9234248 9234271 -80270282 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2138 92 0 0 chr17 9234287 9234593 -80269960 + AluY SINE Alu 1 306 0 1119 155 5 0 chr17 9236668 9236868 -80267685 - AluJb SINE Alu -25 287 87 645 165 24 24 chr17 9237561 9237688 -80266865 + AluJo SINE Alu 2 128 -174 206 234 0 0 chr17 9237974 9238021 -80266532 + L2 LINE L2 3267 3313 0 1363 191 39 11 chr17 9238171 9238453 -80266100 + AluJo SINE Alu 11 300 -12 1012 163 0 0 chr17 9239931 9240097 -80264456 + AluJo SINE Alu 137 302 0 230 0 33 0 chr17 9240746 9240776 -80263777 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 791 229 0 0 chr17 9240776 9240920 -80263633 - FRAM SINE Alu -32 144 1 180 0 0 0 chr17 9241625 9241645 -80262908 + (TC)n Simple_repeat Simple_repeat 2 21 0 1724 122 0 8 chr17 9241645 9241899 -80262654 - AluSc SINE Alu -17 292 41 1413 207 7 0 chr17 9243204 9243489 -80261064 + AluJo SINE Alu 1 287 -25 545 350 66 34 chr17 9243628 9244065 -80260488 - L3 LINE CR1 -156 1421 971 998 195 0 0 chr17 9244118 9244308 -80260245 + AluJb SINE Alu 6 195 -117 277 245 21 0 chr17 9244350 9244429 -80260124 - MER5A DNA MER1_type -32 146 65 1495 175 3 7 chr17 9244673 9244959 -80259594 + AluJb SINE Alu 13 297 -15 383 340 72 30 chr17 9245026 9245261 -80259292 + L1 LINE L1 4538 4782 -1364 1509 174 57 63 chr17 9245872 9245918 -80258635 + MLT1A1 LTR MaLR 1 46 -319 2620 99 3 3 chr17 9245918 9246273 -80258280 - THE1A LTR MaLR 0 355 1 1509 174 57 63 chr17 9246273 9246593 -80257960 + MLT1A1 LTR MaLR 46 365 0 322 200 0 0 chr17 9246593 9246648 -80257905 - L1MC/D LINE L1 -2305 6001 5947 1881 145 7 0 chr17 9247085 9247381 -80257172 - AluJb SINE Alu -14 298 1 1979 129 0 7 chr17 9247793 9248087 -80256466 + AluSx SINE Alu 3 294 -18 2107 94 0 7 chr17 9248209 9248497 -80256056 - AluY SINE Alu -25 286 1 4089 153 11 25 chr17 9248633 9248755 -80255798 - L1MB2 LINE L1 -2 6169 6047 2355 73 0 3 chr17 9248755 9249058 -80255495 + AluY SINE Alu 1 302 -9 4089 153 11 25 chr17 9249058 9249682 -80254871 - L1MB2 LINE L1 -124 6047 5434 383 299 102 16 chr17 9249812 9249939 -80254614 - L2 LINE L2 -7 3306 3169 1419 191 0 47 chr17 9251178 9251508 -80253045 - AluJb SINE Alu 0 316 1 23 0 0 0 chr17 9251734 9251757 -80252796 + AT_rich Low_complexity Low_complexity 1 23 0 227 252 148 30 chr17 9252059 9252194 -80252359 - MIR3 SINE MIR -4 204 54 3947 67 12 2 chr17 9252330 9252838 -80251715 + LTR10D LTR ERV1 1 513 0 1684 162 28 99 chr17 9253047 9253441 -80251112 + MLT1A2 LTR MaLR 1 366 -8 488 322 91 91 chr17 9253652 9254265 -80250288 + L1MEd LINE L1 683 1420 -1070 822 285 142 19 chr17 9254304 9254777 -80249776 - L1MC4a LINE L1 -1661 6147 5617 417 262 88 59 chr17 9254780 9254966 -80249587 - L1MC/D LINE L1 -775 5869 5690 2639 58 0 0 chr17 9254966 9255275 -80249278 - AluY SINE Alu -2 309 1 1671 168 7 34 chr17 9255282 9255580 -80248973 - AluJb SINE Alu -22 290 1 417 262 88 59 chr17 9255580 9255725 -80248828 - L1MC/D LINE L1 -959 5685 5520 2130 118 7 3 chr17 9255730 9256027 -80248526 - AluJb SINE Alu -14 298 1 236 290 39 32 chr17 9256030 9256185 -80248368 - L1MC/D LINE L1 -1103 5541 5386 2356 114 0 3 chr17 9256487 9256793 -80247760 - AluSx SINE Alu -7 305 1 1636 110 24 12 chr17 9256814 9257069 -80247484 - L1MA2 LINE L1 0 6304 6047 287 243 0 9 chr17 9257069 9257176 -80247377 - L1MC/D LINE L1 -1641 5003 4898 510 246 130 19 chr17 9257191 9257406 -80247147 + HAL1 LINE L1 1431 1669 -838 3591 238 28 40 chr17 9257439 9258769 -80245784 - L1MC/D LINE L1 -4314 2511 1166 2438 80 0 0 chr17 9258769 9259070 -80245483 - AluY SINE Alu -10 301 1 3591 238 28 40 chr17 9259070 9259091 -80245462 - L1MC/D LINE L1 -5659 1166 1146 1494 175 46 103 chr17 9259091 9259476 -80245077 + MSTB1 LTR MaLR 1 357 -75 1798 188 0 3 chr17 9259476 9259779 -80244774 - AluJo SINE Alu -6 306 5 1494 175 46 103 chr17 9259779 9259851 -80244702 + MSTB1 LTR MaLR 357 432 0 3591 238 28 40 chr17 9259851 9260021 -80244532 - L1MC/D LINE L1 -5679 1146 880 2011 253 55 67 chr17 9260076 9260962 -80243591 - L1MC/D LINE L1 -5653 889 14 433 273 131 22 chr17 9261518 9261976 -80242577 + L1ME2 LINE L1 2113 2620 -3526 527 258 85 51 chr17 9262043 9262478 -80242075 + L1ME2 LINE L1 2750 3199 -2947 237 200 0 18 chr17 9262576 9262631 -80241922 - MLT1L LTR MaLR -205 410 357 247 171 12 110 chr17 9262753 9262835 -80241718 - MLT1L LTR MaLR -534 81 8 1208 279 98 83 chr17 9262835 9263286 -80241267 + L1ME2 LINE L1 3356 3799 -2347 2446 87 0 3 chr17 9263286 9263586 -80240967 + AluSq SINE Alu 1 299 -14 1208 279 98 83 chr17 9263586 9263775 -80240778 + L1ME2 LINE L1 3799 3984 -2162 1102 174 190 28 chr17 9263775 9264022 -80240531 + AluJo SINE Alu 2 288 -14 1208 279 98 83 chr17 9264022 9264515 -80240038 + L1ME2 LINE L1 3984 4468 -1678 2468 65 0 0 chr17 9264515 9264831 -80239722 + AluY SINE Alu 1 316 0 1208 279 98 83 chr17 9264831 9265644 -80238909 + L1ME2 LINE L1 4468 5334 -812 6501 142 42 85 chr17 9265769 9266974 -80237579 + L1MCa LINE L1 21 1162 -5264 2356 92 0 3 chr17 9266974 9267278 -80237275 + AluSg SINE Alu 1 303 -7 6501 142 42 85 chr17 9267278 9267421 -80237132 + L1MCa LINE L1 1162 1310 -5116 3187 138 7 41 chr17 9267420 9267741 -80236812 - L1M3 LINE L1 -363 5820 5531 * 1858 137 32 0 chr17 9267741 9268038 -80236515 - AluSx SINE Alu 0 306 1 3187 138 7 41 chr17 9268038 9268388 -80236165 - L1M3 LINE L1 -652 5531 5171 329 227 9 45 chr17 9270444 9270554 -80233999 - MIR3 SINE MIR -18 190 85 2665 114 62 0 chr17 9270586 9270989 -80233564 - MSTC LTR MaLR 0 428 1 2319 60 20 27 chr17 9271272 9271448 -80233105 - AluY SINE Alu -12 299 124 225 0 0 0 chr17 9271448 9271473 -80233080 + (TG)n Simple_repeat Simple_repeat 2 26 0 2319 60 20 27 chr17 9271473 9271597 -80232956 - AluY SINE Alu -187 124 1 351 258 42 42 chr17 9272062 9272182 -80232371 + MIR SINE MIR 32 151 -111 204 290 21 21 chr17 9272493 9272586 -80231967 + MIR SINE MIR 104 196 -66 448 275 22 0 chr17 9272795 9272933 -80231620 + MER103 DNA DNA 23 163 -3 2236 205 4 52 chr17 9274849 9274909 -80229644 + L1ME2 LINE L1 5382 5443 -723 1397 180 134 10 chr17 9274909 9275214 -80229339 - MER2 DNA MER2_type 0 344 2 2236 205 4 52 chr17 9275214 9275655 -80228898 + L1ME2 LINE L1 5443 5859 -307 994 211 119 144 chr17 9275665 9276394 -80228159 + MER21B LTR ERV1 9 719 -144 271 181 110 40 chr17 9276394 9276495 -80228058 + L1ME2 LINE L1 5870 5986 -180 300 127 55 0 chr17 9276554 9276609 -80227944 + L1MA10 LINE L1 6277 6334 0 2612 62 0 0 chr17 9276892 9277201 -80227352 + AluY SINE Alu 1 309 -2 22 0 0 0 chr17 9277202 9277224 -80227329 + AT_rich Low_complexity Low_complexity 1 22 0 335 41 20 0 chr17 9277362 9277411 -80227142 + (TG)n Simple_repeat Simple_repeat 2 51 0 206 288 27 41 chr17 9277427 9277500 -80227053 + L2 LINE L2 3151 3222 -50 728 241 80 44 chr17 9277925 9278174 -80226379 + MIR SINE MIR 2 259 -3 259 221 93 48 chr17 9278249 9278363 -80226190 - MER5A DNA MER1_type -14 165 39 195 256 150 25 chr17 9278408 9278550 -80226003 + MIR SINE MIR 29 189 -73 253 275 99 28 chr17 9278653 9278795 -80225758 + MLT1J LTR MaLR 5 156 -355 1820 146 11 7 chr17 9278826 9279133 -80225420 - AluJo SINE Alu 0 312 11 500 260 111 37 chr17 9279184 9279427 -80225126 + MLT1L LTR MaLR 224 560 -55 2093 101 0 28 chr17 9279496 9279830 -80224723 + AluSc SINE Alu 1 326 0 2343 87 0 0 chr17 9280434 9280720 -80223833 - AluSc SINE Alu -23 286 1 180 111 0 0 chr17 9283207 9283234 -80221319 + (CGGGGG)n Simple_repeat Simple_repeat 3 29 0 407 245 7 135 chr17 9283476 9283758 -80220795 + L2 LINE L2 2978 3223 -90 416 293 8 8 chr17 9283781 9283904 -80220649 - LTR16A LTR ERVL -264 186 64 2408 83 0 3 chr17 9284227 9284527 -80220026 + AluY SINE Alu 1 299 -12 984 104 7 14 chr17 9285839 9285983 -80218570 + FLAM_C SINE Alu 1 143 0 2270 96 13 22 chr17 9285995 9286307 -80218246 + AluSx SINE Alu 1 309 -3 764 176 21 21 chr17 9286311 9286453 -80218100 + AluJb SINE Alu 131 272 -40 201 366 42 0 chr17 9288658 9288729 -80215824 - L3b LINE CR1 0 1583 1510 * 325 217 245 35 chr17 9288715 9288858 -80215695 - MER5B DNA MER1_type -5 173 1 711 199 226 5 chr17 9289005 9289191 -80215362 + MIR SINE MIR 16 242 -20 2283 109 0 7 chr17 9289492 9289794 -80214759 + AluSx SINE Alu 1 300 -12 303 253 74 0 chr17 9291010 9291105 -80213448 + L3 LINE CR1 1342 1443 -134 299 285 21 90 chr17 9291384 9291528 -80213025 - L2 LINE L2 -219 3053 2920 646 180 9 0 chr17 9291764 9291875 -80212678 - MER81 DNA DNA 0 114 3 298 239 67 67 chr17 9292061 9292195 -80212358 - MIR SINE MIR -8 254 121 454 177 25 0 chr17 9292215 9292294 -80212259 - MER2 DNA MER2_type -264 81 1 535 224 80 0 chr17 9292296 9292421 -80212132 - MIR SINE MIR -116 146 12 202 380 107 10 chr17 9292433 9292741 -80211812 - L2 LINE L2 -957 2357 2020 2018 228 25 0 chr17 9292917 9293351 -80211202 + L1PA15-16 LINE L1 2445 2889 -3960 1224 142 0 71 chr17 9293355 9293567 -80210986 + AluJb SINE Alu 1 197 -115 1339 184 82 3 chr17 9293570 9293886 -80210667 + L1 LINE L1 2881 3221 -3628 2395 110 42 20 chr17 9293890 9294246 -80210307 - THE1B LTR MaLR 0 364 1 11908 78 25 5 chr17 9294246 9295795 -80208758 - THE1B-int LTR MaLR 0 1580 1 2357 94 50 20 chr17 9295803 9296144 -80208409 - THE1B LTR MaLR -13 351 1 8146 194 13 11 chr17 9296144 9297843 -80206710 + L1 LINE L1 3221 4922 -1927 2373 99 0 0 chr17 9298074 9298376 -80206177 - AluSg SINE Alu -8 302 1 1053 257 43 36 chr17 9298449 9298865 -80205688 + HAL1 LINE L1 1116 1534 -973 2209 90 0 0 chr17 9299100 9299379 -80205174 + AluSc SINE Alu 17 295 -14 1281 283 76 35 chr17 9299551 9299617 -80204936 + L1MEd LINE L1 330 392 -5727 186 43 0 0 chr17 9299617 9299640 -80204913 + (CAAA)n Simple_repeat Simple_repeat 4 26 0 1281 283 76 35 chr17 9299640 9300114 -80204439 + L1MEd LINE L1 392 892 -5227 450 144 222 78 chr17 9300134 9300287 -80204266 + MER104 DNA Tc2 6 180 0 346 278 148 60 chr17 9300491 9301178 -80203375 + L1ME4a LINE L1 5330 6077 -44 2233 93 4 0 chr17 9301220 9301532 -80203021 + AluSg SINE Alu 1 313 0 207 100 0 0 chr17 9301767 9301797 -80202756 + (T)n Simple_repeat Simple_repeat 1 30 0 2199 128 0 0 chr17 9302225 9302521 -80202032 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr17 9303504 9303525 -80201028 + AT_rich Low_complexity Low_complexity 1 21 0 231 204 0 0 chr17 9303529 9303578 -80200975 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 228 200 18 0 chr17 9303578 9303633 -80200920 - L1MCa LINE L1 -4362 2064 2009 216 216 0 0 chr17 9303639 9303690 -80200863 + (TA)n Simple_repeat Simple_repeat 1 51 0 330 218 0 89 chr17 9303697 9303798 -80200755 + L1MC4 LINE L1 6614 6705 -1337 1379 83 10 42 chr17 9303813 9304006 -80200547 - AluSg/x SINE Alu -20 292 106 412 268 99 23 chr17 9304208 9304408 -80200145 - MIR SINE MIR -49 213 8 272 296 74 9 chr17 9304852 9304960 -80199593 - L2 LINE L2 -1 3312 3198 440 308 38 25 chr17 9305049 9305208 -80199345 + MIR SINE MIR 13 173 -89 975 96 0 15 chr17 9305911 9306046 -80198507 - FLAM_C SINE Alu 0 133 1 252 118 20 39 chr17 9307587 9307638 -80196915 - L2 LINE L2 -22 3250 3201 453 299 33 33 chr17 9307646 9307830 -80196723 + MIR3 SINE MIR 20 203 -5 2323 107 3 3 chr17 9307843 9308143 -80196410 + AluSp SINE Alu 1 300 -13 252 259 0 0 chr17 9308248 9308306 -80196247 - MIR3 SINE MIR -4 204 147 267 331 16 24 chr17 9308355 9308479 -80196074 + MARNA DNA Mariner 81 203 -383 316 317 61 43 chr17 9308618 9308782 -80195771 + HAL1b LINE L1 498 664 -684 1287 302 96 62 chr17 9308863 9309821 -80194732 + L1M4 LINE L1 4304 5294 -852 827 259 25 80 chr17 9309864 9310138 -80194415 + MIR SINE MIR 2 260 -2 4067 57 2 2 chr17 9310151 9310660 -80193893 + L1PA8 LINE L1 5660 6168 -4 266 247 26 26 chr17 9311203 9311280 -80193273 + MIR SINE MIR 60 136 -72 661 53 21 0 chr17 9311580 9311674 -80192879 + (GA)n Simple_repeat Simple_repeat 1 96 0 568 279 32 20 chr17 9312047 9312248 -80192305 + MIR SINE MIR 1 208 -54 629 218 0 5 chr17 9312929 9313521 -80191032 + (CA)n Simple_repeat Simple_repeat 1 588 0 887 302 20 24 chr17 9314381 9314636 -80189917 - MIR SINE MIR -6 256 3 2457 72 0 10 chr17 9314718 9315025 -80189528 + AluY SINE Alu 1 304 -7 1354 103 0 0 chr17 9315037 9315211 -80189342 + AluJb SINE Alu 134 307 -5 835 199 4 108 chr17 9315960 9316191 -80188362 + MIR SINE MIR 36 242 -20 2094 91 12 75 chr17 9316229 9316560 -80187993 - AluSx SINE Alu -2 310 1 374 241 0 36 chr17 9317224 9317307 -80187246 + L2 LINE L2 3185 3264 -49 257 196 22 0 chr17 9317312 9317358 -80187195 - L2 LINE L2 -38 3275 3229 717 232 20 111 chr17 9317359 9317398 -80187155 - L2 LINE L2 -248 3065 3024 2404 91 0 3 chr17 9317398 9317696 -80186857 - AluSc SINE Alu -12 297 1 717 232 20 111 chr17 9317696 9317743 -80186810 - L2 LINE L2 -289 3024 2974 2319 68 41 3 chr17 9317743 9318035 -80186518 + AluY SINE Alu 1 303 -8 717 232 20 111 chr17 9318035 9318249 -80186304 - L2 LINE L2 -339 2974 2810 1519 187 37 30 chr17 9318249 9318549 -80186004 - AluJo SINE Alu -10 302 1 717 232 20 111 chr17 9318549 9318610 -80185943 - L2 LINE L2 -503 2810 2745 2242 113 0 0 chr17 9318701 9318994 -80185559 - AluSx SINE Alu -19 293 1 231 207 184 23 chr17 9319478 9319565 -80184988 - Charlie8 DNA MER1_type -2152 265 165 184 153 0 68 chr17 9320786 9320845 -80183708 + GA-rich Low_complexity Low_complexity 2 56 0 675 212 16 22 chr17 9322131 9322315 -80182238 - MER113 DNA MER1_type? -304 217 35 2263 128 0 0 chr17 9322922 9323234 -80181319 + AluSx SINE Alu 1 312 0 375 219 27 0 chr17 9323761 9323834 -80180719 - MER113 DNA MER1_type? -5 516 442 410 167 2 98 chr17 9323874 9324549 -80180004 + (TA)n Simple_repeat Simple_repeat 1 610 0 260 57 0 0 chr17 9324557 9324592 -80179961 + MADE1 DNA Mariner 1 35 -45 2377 88 0 0 chr17 9324592 9324608 -80179945 - AluY SINE Alu -14 297 282 180 0 0 0 chr17 9324608 9324628 -80179925 + (TG)n Simple_repeat Simple_repeat 1 20 0 2377 88 0 0 chr17 9324628 9324908 -80179645 - AluY SINE Alu -28 283 1 27 0 0 0 chr17 9324956 9324983 -80179570 + AT_rich Low_complexity Low_complexity 1 27 0 226 231 0 131 chr17 9325038 9325096 -80179457 - MER113 DNA MER1_type? -402 119 86 2017 171 72 22 chr17 9325096 9325540 -80179013 + MER31B LTR ERV1 1 466 0 226 231 0 131 chr17 9325540 9325611 -80178942 - MER113 DNA MER1_type? -435 86 7 357 276 117 41 chr17 9325612 9325693 -80178860 + LTR16B LTR ERVL 1 74 -390 2501 117 57 29 chr17 9325693 9326113 -80178440 + MSTB1 LTR MaLR 1 432 0 357 276 117 41 chr17 9326113 9326428 -80178125 + LTR16B LTR ERVL 74 464 0 247 143 18 18 chr17 9327132 9327188 -80177365 + CT-rich Low_complexity Low_complexity 4 59 0 916 273 27 30 chr17 9327428 9327761 -80176792 + MER102b DNA MER1_type 10 341 0 34 24 0 0 chr17 9328441 9328482 -80176071 + AT_rich Low_complexity Low_complexity 1 41 0 5442 145 18 35 chr17 9328482 9329520 -80175033 - L1PA16 LINE L1 -6 6160 5165 2054 138 34 0 chr17 9329520 9329818 -80174735 + AluSx SINE Alu 1 308 -4 5442 145 18 35 chr17 9329818 9330545 -80174008 - L1PA16 LINE L1 -1001 5165 4427 607 207 75 27 chr17 9330612 9330800 -80173753 + MLT1J2 LTR MaLR 15 211 -239 339 257 30 0 chr17 9330832 9330933 -80173620 + MLT1J2 LTR MaLR 343 446 -4 243 225 11 90 chr17 9330947 9331036 -80173517 - MIR SINE MIR -50 212 131 2298 101 0 7 chr17 9331374 9331672 -80172881 + AluSx SINE Alu 1 296 -16 1598 174 113 10 chr17 9332224 9332535 -80172018 - MER7A DNA MER2_type -5 341 1 228 35 0 0 chr17 9332685 9332714 -80171839 + (TGGA)n Simple_repeat Simple_repeat 2 30 0 667 247 6 41 chr17 9332926 9333096 -80171457 + MIR SINE MIR 16 179 -83 674 345 26 0 chr17 9333131 9333360 -80171193 + MIR SINE MIR 23 257 -5 2261 105 16 3 chr17 9333876 9334182 -80170371 + AluSq SINE Alu 1 310 -3 851 251 21 41 chr17 9334185 9334428 -80170125 - MIR SINE MIR -10 252 15 300 323 43 18 chr17 9334824 9334988 -80169565 + L1ME LINE L1 3523 3690 -2456 180 97 0 0 chr17 9335037 9335068 -80169485 + (A)n Simple_repeat Simple_repeat 1 31 0 2362 50 4 4 chr17 9335070 9335349 -80169204 + AluY SINE Alu 1 279 -32 221 53 53 0 chr17 9335350 9335388 -80169165 + A-rich Low_complexity Low_complexity 1 40 0 272 114 0 0 chr17 9335388 9335432 -80169121 + L1MB4 LINE L1 5480 5523 -648 3746 152 3 23 chr17 9335504 9336167 -80168386 + L1MB4 LINE L1 5531 6180 0 607 275 93 55 chr17 9336264 9336312 -80168241 + L1ME LINE L1 5391 5436 -685 2350 95 0 3 chr17 9336312 9336608 -80167945 + AluSg SINE Alu 1 295 -15 607 275 93 55 chr17 9336608 9336977 -80167576 + L1ME LINE L1 5436 5824 -297 2552 293 25 49 chr17 9337009 9337062 -80167491 + L1ME1 LINE L1 4375 4428 -1738 2238 98 0 0 chr17 9337062 9337380 -80167173 + AluY SINE Alu 5 322 0 2552 293 25 49 chr17 9337380 9337536 -80167017 + L1ME1 LINE L1 4428 4586 -1580 2269 108 0 3 chr17 9337536 9337832 -80166721 + AluSc SINE Alu 1 295 -14 2552 293 25 49 chr17 9337832 9338030 -80166523 + L1ME1 LINE L1 4586 4787 -1379 1935 114 4 0 chr17 9338030 9338285 -80166268 - AluSg SINE Alu -54 256 1 2552 293 25 49 chr17 9338285 9338750 -80165803 + L1ME1 LINE L1 4787 5261 -905 2172 131 3 10 chr17 9338750 9339112 -80165441 + AluSx SINE Alu 1 312 0 2552 293 25 49 chr17 9339112 9339432 -80165121 + L1ME1 LINE L1 5261 5587 -579 892 54 0 0 chr17 9339432 9339543 -80165010 - L1PA7 LINE L1 0 6154 6044 2552 293 25 49 chr17 9339543 9339987 -80164566 + L1ME1 LINE L1 5587 5970 -196 875 187 32 41 chr17 9340008 9340158 -80164395 - L1MD2 LINE L1 0 6359 6210 2184 126 3 0 chr17 9340158 9340460 -80164093 + AluSq SINE Alu 1 303 -10 875 187 32 41 chr17 9340460 9340528 -80164025 - L1MD2 LINE L1 -149 6210 6143 814 292 101 36 chr17 9340799 9341155 -80163398 + L2 LINE L2 2934 3312 -1 200 343 15 0 chr17 9341154 9341221 -80163332 - MIR SINE MIR -97 111 44 * 1989 106 11 4 chr17 9341494 9341768 -80162785 + AluSq SINE Alu 37 312 -1 202 208 151 0 chr17 9341839 9341892 -80162661 - L2 LINE L2 -3 3269 3209 2366 69 16 7 chr17 9342148 9342453 -80162100 - AluSq SINE Alu -5 308 1 188 372 23 12 chr17 9343071 9343157 -80161396 - L2 LINE L2 -35 3237 3151 2542 174 28 58 chr17 9343287 9343823 -80160730 + MLT2B1 LTR ERVL 1 520 0 1832 137 11 85 chr17 9344003 9344264 -80160289 + MER1B DNA MER1_type 1 229 -2481 222 62 0 0 chr17 9344264 9344296 -80160257 + (CCCCAG)n Simple_repeat Simple_repeat 3 34 0 1832 137 11 85 chr17 9344296 9344398 -80160155 + MER1B DNA MER1_type 229 337 0 779 199 47 31 chr17 9344432 9344623 -80159930 + Charlie8 DNA MER1_type 54 247 -2170 2298 85 51 0 chr17 9344756 9345051 -80159502 + AluSg SINE Alu 1 310 0 2088 207 0 0 chr17 9345231 9345608 -80158945 + MER44D DNA MER2_type 1 377 -328 228 278 0 0 chr17 9345595 9345649 -80158904 - MER44D DNA MER2_type -41 564 639 * 2119 148 16 11 chr17 9345648 9346014 -80158539 + MER44D DNA MER2_type 364 603 -2 506 266 35 35 chr17 9346023 9346166 -80158387 + L2 LINE L2 3171 3313 0 770 218 92 187 chr17 9346768 9347066 -80157487 - L2 LINE L2 -1 3312 2987 1564 163 23 10 chr17 9347066 9347367 -80157186 - L1MA7 LINE L1 0 6291 5987 770 218 92 187 chr17 9347367 9347383 -80157170 - L2 LINE L2 -326 2987 2971 2376 59 3 10 chr17 9347383 9347673 -80156880 - AluSc SINE Alu -21 288 1 770 218 92 187 chr17 9347673 9347876 -80156677 - L2 LINE L2 -342 2971 2843 1602 224 120 21 chr17 9347876 9348310 -80156243 + LTR40a LTR ERVL 1 477 -42 2518 69 0 3 chr17 9348369 9348675 -80155878 - AluSc SINE Alu -4 305 1 516 222 32 16 chr17 9349949 9350075 -80154478 + MIR SINE MIR 90 217 -45 2090 107 7 17 chr17 9350094 9350393 -80154160 + AluY SINE Alu 1 296 -15 439 266 59 42 chr17 9350850 9351038 -80153515 + MIR SINE MIR 18 204 -58 605 301 201 32 chr17 9351748 9352306 -80152247 + L2 LINE L2 2250 2901 -413 526 162 46 104 chr17 9352741 9352914 -80151639 + MLT1K LTR MaLR 417 579 -9 204 376 55 28 chr17 9353093 9353202 -80151351 + L2 LINE L2 3096 3207 -65 304 226 0 16 chr17 9355152 9355214 -80149339 + MER5A DNA MER1_type 1 61 -128 2300 123 0 0 chr17 9355489 9355799 -80148754 + AluSx SINE Alu 1 310 -2 330 169 0 0 chr17 9356619 9356684 -80147869 + (CA)n Simple_repeat Simple_repeat 1 65 0 346 237 25 39 chr17 9356705 9356854 -80147699 + MIR3 SINE MIR 37 185 -23 909 207 57 37 chr17 9357351 9357597 -80146956 + MIR SINE MIR 2 252 -10 506 60 5 2 chr17 9358463 9358534 -80146019 - LTR6B LTR ERV1 0 558 492 4164 35 8 4 chr17 9358735 9359256 -80145297 - LTR6B LTR ERV1 -35 523 1 1870 94 0 12 chr17 9360177 9360422 -80144131 + AluSx SINE Alu 3 244 -68 516 203 23 170 chr17 9360422 9360939 -80143614 - L1MCa LINE L1 -3486 2940 2500 2444 60 0 0 chr17 9360943 9361249 -80143304 - AluY SINE Alu 0 306 1 266 225 59 70 chr17 9361305 9361492 -80143061 - L1MCa LINE L1 -4801 1625 1441 285 29 0 0 chr17 9361501 9361535 -80143018 + (TG)n Simple_repeat Simple_repeat 2 35 0 720 198 198 12 chr17 9361544 9361797 -80142756 - L1MD3 LINE L1 -170 7825 7526 231 317 108 36 chr17 9363593 9363760 -80140793 - MIR SINE MIR -7 255 77 254 231 0 19 chr17 9363919 9363971 -80140582 + (CGTG)n Simple_repeat Simple_repeat 1 51 0 222 236 0 0 chr17 9365363 9365418 -80139135 + (CA)n Simple_repeat Simple_repeat 1 55 0 927 307 95 58 chr17 9366099 9366922 -80137631 + L2 LINE L2 1893 2776 -496 2201 118 3 3 chr17 9366922 9367228 -80137325 + AluSg SINE Alu 1 306 -4 927 307 95 58 chr17 9367228 9367723 -80136830 + L2 LINE L2 2776 3251 -21 187 298 88 51 chr17 9367794 9368009 -80136544 + L2 LINE L2 3084 3306 -7 2058 115 0 28 chr17 9371368 9371714 -80132839 + AluSx SINE Alu 5 342 0 267 79 0 0 chr17 9372442 9372480 -80132073 + (TCC)n Simple_repeat Simple_repeat 2 39 0 232 341 92 12 chr17 9372903 9373067 -80131486 - MIR3 SINE MIR -23 185 9 292 261 72 0 chr17 9373082 9373193 -80131360 + MIR SINE MIR 68 186 -76 474 279 60 71 chr17 9373194 9373575 -80130978 + MLT1J LTR MaLR 1 417 -94 181 281 18 79 chr17 9374023 9374137 -80130416 - MIR SINE MIR -83 125 19 2404 74 0 29 chr17 9375245 9375557 -80128996 - AluY SINE Alu -8 303 1 245 322 83 17 chr17 9375562 9375742 -80128811 - L1MC5 LINE L1 -48 7913 7722 416 224 140 9 chr17 9376108 9376215 -80128338 + MIR SINE MIR 106 226 -36 322 287 155 0 chr17 9376568 9376697 -80127856 - MER112 DNA MER1_type -7 253 105 297 0 0 0 chr17 9376700 9376733 -80127820 + (TG)n Simple_repeat Simple_repeat 2 34 0 241 233 33 0 chr17 9376737 9376797 -80127756 - MER112 DNA MER1_type -198 62 1 434 246 49 8 chr17 9376827 9376949 -80127604 + MIR SINE MIR 20 146 -116 373 216 182 57 chr17 9377639 9377815 -80126738 + MIR3 SINE MIR 3 200 -8 248 261 171 9 chr17 9381238 9381349 -80123204 + MLT1J LTR MaLR 1 129 -382 692 287 52 45 chr17 9381374 9381559 -80122994 + MLT1J LTR MaLR 239 428 -83 341 58 19 0 chr17 9381559 9381611 -80122942 + (TG)n Simple_repeat Simple_repeat 2 54 0 692 287 52 45 chr17 9381611 9381693 -80122860 + MLT1J LTR MaLR 428 508 -3 452 232 45 0 chr17 9382142 9382285 -80122268 + MIR SINE MIR 42 192 -63 276 228 127 0 chr17 9382365 9382444 -80122109 - MIR SINE MIR -109 153 65 475 297 51 11 chr17 9383106 9383281 -80121272 - MIR SINE MIR -75 187 6 2478 82 0 0 chr17 9383399 9383691 -80120862 + AluSg SINE Alu 1 292 -18 798 248 112 61 chr17 9383691 9384066 -80120487 + LTR37B LTR ERV1 66 459 -9 456 284 84 38 chr17 9385317 9385637 -80118916 - L1ME4a LINE L1 -194 5927 5593 323 221 49 57 chr17 9385656 9385778 -80118775 - L1ME4a LINE L1 -616 5505 5385 1021 347 71 56 chr17 9385809 9385890 -80118663 - L1ME4a LINE L1 -816 5330 5252 2374 96 7 0 chr17 9385890 9386193 -80118360 - AluSc SINE Alu -4 305 1 1021 347 71 56 chr17 9386193 9386469 -80118084 - L1ME4a LINE L1 -894 5252 4982 2317 94 3 28 chr17 9386469 9386788 -80117765 - AluSq SINE Alu -2 311 1 1021 347 71 56 chr17 9386788 9387415 -80117138 - L1ME4a LINE L1 -1164 4982 4330 232 217 11 43 chr17 9387681 9387773 -80116780 - L1ME4a LINE L1 -2182 3964 3876 268 298 10 19 chr17 9388841 9388945 -80115608 - MARNA DNA Mariner -153 433 331 495 338 87 10 chr17 9388969 9389268 -80115285 - MARNA DNA Mariner -175 411 90 2217 38 7 7 chr17 9389735 9390024 -80114529 - L1PA8 LINE L1 0 6172 5884 374 330 58 17 chr17 9390098 9390271 -80114282 - L1M4 LINE L1 -847 5299 5120 1421 129 0 0 chr17 9390351 9390537 -80114016 + AluSx SINE Alu 3 188 -124 381 262 74 125 chr17 9390722 9390775 -80113778 - L1ME LINE L1 -297 5824 5770 2241 102 0 33 chr17 9390775 9391079 -80113474 - AluSc SINE Alu -14 295 2 381 262 74 125 chr17 9391079 9391407 -80113146 - L1ME LINE L1 -351 5770 5473 1929 146 11 4 chr17 9391407 9391687 -80112866 - AluJo SINE Alu -30 282 1 381 262 74 125 chr17 9391687 9391816 -80112737 - L1ME LINE L1 -648 5473 5339 441 0 0 0 chr17 9392280 9392329 -80112224 + (CA)n Simple_repeat Simple_repeat 2 50 0 2452 72 3 0 chr17 9393052 9393342 -80111211 - AluSc SINE Alu -18 291 1 628 252 21 7 chr17 9393942 9394085 -80110468 + MER69 DNA AcHobo 3 147 -1079 228 203 14 54 chr17 9394079 9394153 -80110400 + MER69 DNA AcHobo 2447 2517 -9 * 466 273 61 69 chr17 9394169 9394400 -80110153 - MIR SINE MIR -6 256 28 * 561 204 102 7 chr17 9394396 9394543 -80110010 - L2 LINE L2 -257 3056 2896 607 304 22 6 chr17 9396066 9396247 -80108306 + MIR SINE MIR 7 190 -72 355 346 86 40 chr17 9396726 9397053 -80107500 - L2 LINE L2 -20 3252 2911 2247 113 0 16 chr17 9397180 9397491 -80107062 + AluSx SINE Alu 1 306 -6 308 264 22 11 chr17 9397950 9398041 -80106512 - MIR3 SINE MIR -27 181 90 488 190 10 10 chr17 9398685 9398785 -80105768 - MIR SINE MIR -124 138 39 2144 87 36 4 chr17 9398913 9399190 -80105363 + AluSx SINE Alu 18 303 -9 23 0 0 0 chr17 9400228 9400251 -80104302 + GC_rich Low_complexity Low_complexity 1 23 0 6330 193 31 85 chr17 9400879 9401339 -80103214 + L1MC4a LINE L1 5981 6464 -1344 2351 121 0 0 chr17 9401339 9401646 -80102907 + AluSx SINE Alu 1 307 -5 6330 193 31 85 chr17 9401646 9403052 -80101501 + L1MC4a LINE L1 6464 7746 -62 224 122 24 0 chr17 9403586 9403627 -80100926 + CT-rich Low_complexity Low_complexity 2 43 0 2317 98 23 0 chr17 9403634 9403939 -80100614 - AluSx SINE Alu 0 312 1 427 244 15 46 chr17 9404111 9404242 -80100311 - MIR3 SINE MIR -29 179 53 497 308 49 80 chr17 9404353 9404584 -80099969 - HAL1b LINE L1 -542 806 821 2493 93 3 0 chr17 9404584 9404896 -80099657 - AluSq SINE Alu 0 313 1 497 308 49 80 chr17 9404896 9405245 -80099308 - HAL1b LINE L1 -526 822 464 437 290 158 22 chr17 9405240 9405512 -80099041 + L1M4 LINE L1 4231 4539 -1607 * 1329 182 48 9 chr17 9405514 9405849 -80098704 + L1M4 LINE L1 4969 5316 -830 375 182 0 0 chr17 9405883 9405960 -80098593 + GA-rich Low_complexity Low_complexity 2 78 0 198 238 0 0 chr17 9405963 9406005 -80098548 - L2 LINE L2 -21 3251 3210 244 97 0 0 chr17 9406059 9406090 -80098463 - THE1-int LTR MaLR -999 581 551 202 330 95 67 chr17 9406100 9406279 -80098274 - MIR SINE MIR -59 203 20 277 320 132 10 chr17 9406821 9407018 -80097535 - MIR SINE MIR -8 254 34 609 210 101 0 chr17 9407088 9407226 -80097327 - MIR SINE MIR 0 262 111 381 93 0 0 chr17 9407619 9407673 -80096880 + (TCCCC)n Simple_repeat Simple_repeat 1 54 0 467 155 0 0 chr17 9407673 9407744 -80096809 - AluJ/FRAM SINE Alu -25 287 217 359 100 33 0 chr17 9407782 9407842 -80096711 + C-rich Low_complexity Low_complexity 1 62 0 1829 138 3 3 chr17 9407842 9408124 -80096429 - AluJb SINE Alu -20 292 11 950 73 46 5 chr17 9408768 9409324 -80095229 + (TAGA)n Simple_repeat Simple_repeat 1 578 0 548 261 234 3 chr17 9409581 9410077 -80094476 - L2 LINE L2 -899 2415 1757 2401 113 8 8 chr17 9410171 9410525 -80094028 - THE1A LTR MaLR -1 354 1 33 43 0 0 chr17 9410587 9410634 -80093919 + AT_rich Low_complexity Low_complexity 1 47 0 24 0 0 0 chr17 9410665 9410689 -80093864 + AT_rich Low_complexity Low_complexity 1 24 0 3493 196 83 11 chr17 9410693 9411439 -80093114 + L1MDa LINE L1 -296 503 -5712 1843 178 52 42 chr17 9411462 9411871 -80092682 + MSTB1 LTR MaLR 17 360 -4 343 155 0 124 chr17 9411918 9412015 -80092538 + L1MDa LINE L1 1182 1266 -4949 3936 218 28 38 chr17 9412059 9413360 -80091193 + L1MDa LINE L1 1219 2580 -3635 2143 159 0 3 chr17 9413360 9413725 -80090828 + L1PB3 LINE L1 5790 6153 -1 3936 218 28 38 chr17 9413725 9414239 -80090314 + L1MDa LINE L1 2580 3098 -3117 3481 166 8 13 chr17 9414239 9414876 -80089677 + L1MD1 LINE L1 5609 6242 0 517 356 18 12 chr17 9415088 9415417 -80089136 + L1MDa LINE L1 54 384 -6012 1557 252 65 76 chr17 9415636 9415989 -80088564 + L1MDa LINE L1 658 1013 -5383 2209 103 0 3 chr17 9415989 9416289 -80088264 - AluSx SINE Alu -13 299 1 1557 252 65 76 chr17 9416289 9416926 -80087627 + L1MDa LINE L1 1013 1637 -4759 365 210 84 8 chr17 9416928 9417047 -80087506 + L1ME2 LINE L1 6018 6145 -19 181 233 0 23 chr17 9417048 9417091 -80087462 + L3b LINE CR1 1129 1170 -413 343 256 67 0 chr17 9417111 9417201 -80087352 + L1MDa LINE L1 1617 1712 -4684 3593 227 58 61 chr17 9417213 9418475 -80086078 + L1MDa LINE L1 3615 4872 -1343 2362 67 0 0 chr17 9419527 9419825 -80084728 + AluY SINE Alu 1 298 -13 2880 142 39 26 chr17 9419853 9420397 -80084156 - L1MC2 LINE L1 -14 6330 5780 5175 227 42 28 chr17 9420418 9421589 -80082964 - L1M4 LINE L1 -1396 4750 3554 2033 101 0 4 chr17 9421589 9421865 -80082688 - AluSq SINE Alu -38 275 1 5175 227 42 28 chr17 9421865 9422127 -80082426 - L1M4 LINE L1 -2592 3554 3297 2037 184 13 0 chr17 9422127 9422512 -80082041 - L1MB7 LINE L1 -16 6168 5779 336 281 58 16 chr17 9422871 9422992 -80081561 - MIR SINE MIR -109 153 28 1932 209 53 9 chr17 9423044 9423493 -80081060 - Charlie4a DNA MER1_type -1 507 39 182 250 50 0 chr17 9424033 9424073 -80080480 + MIR SINE MIR 108 149 -59 2180 110 7 0 chr17 9424305 9424615 -80079938 - AluSq SINE Alu -1 312 1 2496 52 0 3 chr17 9426351 9426660 -80077893 - AluY SINE Alu -3 308 1 240 35 0 0 chr17 9426715 9426744 -80077809 + (CA)n Simple_repeat Simple_repeat 1 29 0 1747 136 0 79 chr17 9426819 9427149 -80077404 - AluJo SINE Alu -8 304 1 2202 97 0 7 chr17 9427245 9427553 -80077000 + AluSg SINE Alu 1 306 -4 3048 104 15 75 chr17 9427642 9428172 -80076381 - L1PA14 LINE L1 0 6161 5664 232 338 0 0 chr17 9428244 9428318 -80076235 + MIR3 SINE MIR 130 203 -5 1478 214 32 25 chr17 9429404 9429941 -80074612 + MLT1G LTR MaLR 7 590 0 196 300 0 0 chr17 9430255 9430305 -80074248 - L3 LINE CR1 -5 1572 1523 418 234 184 58 chr17 9430500 9430761 -80073792 + L2 LINE L2 2920 3213 -100 2451 71 0 0 chr17 9431516 9431826 -80072727 + AluY SINE Alu 1 310 -1 292 221 26 39 chr17 9432078 9432155 -80072398 - L2 LINE L2 -1 3312 3237 1067 267 81 21 chr17 9432212 9432646 -80071907 + L1ME LINE L1 5284 5743 -427 230 410 37 4 chr17 9432830 9433103 -80071450 - L2 LINE L2 -384 2930 2649 484 296 182 76 chr17 9433180 9433269 -80071284 + L3 LINE CR1 62 140 -1437 203 32 65 0 chr17 9433269 9433300 -80071253 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 484 296 182 76 chr17 9433300 9433353 -80071200 + L3 LINE CR1 140 186 -1391 2126 94 52 10 chr17 9433353 9433662 -80070891 + L1PB1 LINE L1 5828 6149 -2 484 296 182 76 chr17 9433662 9434034 -80070519 + L3 LINE CR1 186 632 -945 227 176 0 0 chr17 9434042 9434093 -80070460 - L1MB3 LINE L1 -6 6177 6127 * 5417 126 14 5 chr17 9434088 9435009 -80069544 - L1PA16 LINE L1 0 6166 5202 2524 141 15 0 chr17 9435030 9435435 -80069118 - L1MB3 LINE L1 -50 6133 5723 1665 259 57 136 chr17 9435549 9435992 -80068561 + MLT1J LTR MaLR 1 473 -38 273 119 0 0 chr17 9437813 9437855 -80066698 + (A)n Simple_repeat Simple_repeat 1 42 0 2220 106 0 3 chr17 9438409 9438712 -80065841 + AluSq SINE Alu 2 303 -10 277 224 102 31 chr17 9439014 9439112 -80065441 - L2 LINE L2 -2 3311 3207 1689 133 0 22 chr17 9439668 9439938 -80064615 + AluJb SINE Alu 42 305 -7 696 319 99 28 chr17 9440986 9441381 -80063172 - L3 LINE CR1 -113 1464 1042 451 303 50 48 chr17 9441666 9441787 -80062766 + L1M4 LINE L1 3610 3729 -2417 1705 98 117 0 chr17 9441787 9442052 -80062501 + AluSq SINE Alu 5 300 -13 451 303 50 48 chr17 9442052 9442309 -80062244 + L1M4 LINE L1 3729 3989 -2157 2254 99 3 0 chr17 9442500 9442812 -80061741 - AluSp SINE Alu 0 313 1 198 0 0 0 chr17 9443174 9443196 -80061357 + (TG)n Simple_repeat Simple_repeat 1 22 0 645 326 47 47 chr17 9444030 9444309 -80060244 + L2 LINE L2 2994 3272 0 295 281 7 89 chr17 9444308 9444454 -80060099 - MIR3 SINE MIR -14 194 61 * 293 286 40 16 chr17 9444862 9444988 -80059565 - L2 LINE L2 -219 3053 2925 2120 108 0 9 chr17 9445108 9445424 -80059129 + AluSq SINE Alu 1 313 0 508 224 303 0 chr17 9445844 9446009 -80058544 + MIR SINE MIR 15 229 -33 681 166 0 126 chr17 9446349 9446548 -80058005 - MER104 DNA MER2_type -3 177 4 847 180 58 17 chr17 9446732 9446904 -80057649 - FRAM SINE Alu -4 172 1 827 163 0 0 chr17 9447282 9447429 -80057124 - FRAM SINE Alu -1 175 29 252 272 120 68 chr17 9447792 9447864 -80056689 - MIR SINE MIR -7 255 188 1795 153 3 3 chr17 9447864 9448167 -80056386 + AluJo SINE Alu 1 303 0 252 272 120 68 chr17 9448167 9448303 -80056250 - MIR SINE MIR -74 188 26 261 0 0 0 chr17 9448757 9448786 -80055767 + (CA)n Simple_repeat Simple_repeat 1 29 0 2454 49 10 0 chr17 9449921 9450226 -80054327 - AluSc SINE Alu -1 308 1 215 268 18 0 chr17 9450577 9450633 -80053920 + MIR SINE MIR 96 152 -110 495 267 294 19 chr17 9451688 9452223 -80052330 + L2 LINE L2 1753 2434 -880 4095 194 29 18 chr17 9452244 9453141 -80051412 + L1ME3 LINE L1 5254 6160 -2 476 115 90 0 chr17 9453173 9453251 -80051302 - FRAM SINE Alu -46 130 46 414 0 0 0 chr17 9453264 9453310 -80051243 + (TTA)n Simple_repeat Simple_repeat 1 46 0 771 187 0 0 chr17 9453311 9453434 -80051119 - FLAM_C SINE Alu -20 123 1 316 262 50 64 chr17 9453969 9454110 -80050443 + HAL1 LINE L1 1167 1305 -1202 258 244 79 43 chr17 9454154 9454318 -80050235 + L1M4 LINE L1 3422 3591 -2555 1792 172 28 53 chr17 9454334 9454771 -80049782 + L1MC4a LINE L1 5902 6327 -1481 2496 123 31 39 chr17 9454779 9454959 -80049594 + MSTA LTR MaLR 17 197 -231 2136 110 0 0 chr17 9454959 9455251 -80049302 + AluSc SINE Alu 1 292 -17 2496 123 31 39 chr17 9455251 9455485 -80049068 + MSTA LTR MaLR 197 428 0 192 40 0 0 chr17 9455498 9455523 -80049030 + (A)n Simple_repeat Simple_repeat 1 25 0 2181 190 45 52 chr17 9455566 9456361 -80048192 + L1MC4a LINE L1 6366 7165 -643 2230 95 7 0 chr17 9456361 9456655 -80047898 + AluSx SINE Alu 1 296 -16 2181 190 45 52 chr17 9456655 9456703 -80047850 + L1MC4a LINE L1 7165 7212 -596 1901 146 26 61 chr17 9456703 9456865 -80047688 + MLT1A1 LTR MaLR 1 167 -198 2282 98 3 7 chr17 9456865 9457161 -80047392 + AluSc SINE Alu 1 295 -14 1901 146 26 61 chr17 9457161 9457376 -80047177 + MLT1A1 LTR MaLR 167 365 0 2181 190 45 52 chr17 9457376 9457413 -80047140 + L1MC4a LINE L1 7212 7248 -560 2265 110 0 0 chr17 9457413 9457705 -80046848 - AluSx SINE Alu -19 293 2 2181 190 45 52 chr17 9457705 9457916 -80046637 + L1MC4a LINE L1 7248 7459 -349 1401 163 71 44 chr17 9457916 9458210 -80046343 + AluJo SINE Alu 1 302 0 2181 190 45 52 chr17 9458210 9458566 -80045987 + L1MC4a LINE L1 7459 7808 0 313 216 157 147 chr17 9458609 9458722 -80045831 + L1M4 LINE L1 3615 3733 -2413 2212 105 3 3 chr17 9458722 9459054 -80045499 + AluSq SINE Alu 1 332 0 313 216 157 147 chr17 9459054 9459143 -80045410 + L1M4 LINE L1 3733 3820 -2326 1514 249 77 56 chr17 9459817 9460497 -80044056 - Charlie8 DNA MER1_type -1723 694 1 316 314 131 48 chr17 9460625 9461100 -80043453 + L1M4 LINE L1 3851 4364 -1782 4123 168 29 50 chr17 9461112 9461358 -80043195 + L1MB8 LINE L1 4905 5155 -1023 2237 121 3 13 chr17 9461358 9461672 -80042881 + AluSx SINE Alu 1 311 -1 4123 168 29 50 chr17 9461672 9462386 -80042167 + L1MB8 LINE L1 5155 5882 -296 2583 63 0 0 chr17 9462386 9462685 -80041868 + AluY SINE Alu 1 299 -12 4123 168 29 50 chr17 9462685 9462755 -80041798 + L1MB8 LINE L1 5882 5952 -226 2340 90 16 19 chr17 9462755 9463066 -80041487 + AluSg SINE Alu 1 310 0 4123 168 29 50 chr17 9463066 9463336 -80041217 + L1MB8 LINE L1 5952 6177 -1 658 298 70 66 chr17 9463362 9463802 -80040751 + L1M4 LINE L1 4487 4928 -1218 660 91 0 0 chr17 9463861 9463949 -80040604 - AluSg/x SINE Alu -5 304 217 460 258 91 67 chr17 9463978 9464255 -80040298 + L1ME3A LINE L1 2227 2546 -3948 2423 87 6 6 chr17 9464284 9464595 -80039958 - AluSx SINE Alu -1 311 1 1190 283 212 39 chr17 9464602 9464940 -80039613 + L1ME3A LINE L1 2508 2786 -3640 1975 145 20 3 chr17 9464940 9465243 -80039310 + AluSx SINE Alu 1 308 -4 1190 283 212 39 chr17 9465243 9465546 -80039007 + L1ME3A LINE L1 2786 3035 -3391 1107 149 0 12 chr17 9465546 9465714 -80038839 + FAM SINE Alu 1 166 -9 1190 283 212 39 chr17 9465714 9465886 -80038667 + L1ME3A LINE L1 3035 3176 -3250 2292 104 7 3 chr17 9465886 9466184 -80038369 + AluSx SINE Alu 1 299 -13 1190 283 212 39 chr17 9466184 9466915 -80037638 + L1ME3A LINE L1 3176 4321 -2105 2090 93 11 4 chr17 9466943 9467247 -80037306 - AluSg SINE Alu 0 306 1 1431 173 73 6 chr17 9467275 9467588 -80036965 + L1MB8 LINE L1 5839 6172 -6 422 306 46 0 chr17 9467666 9467862 -80036691 + L1ME3A LINE L1 4348 4552 -1874 2144 124 0 0 chr17 9467862 9468144 -80036409 + AluSq SINE Alu 1 282 -31 749 0 33 0 chr17 9468146 9468237 -80036316 + (GGAAA)n Simple_repeat Simple_repeat 4 97 0 214 182 30 0 chr17 9468243 9468309 -80036244 + GA-rich Low_complexity Low_complexity 1 68 0 229 266 133 8 chr17 9468479 9468607 -80035946 + L1ME3A LINE L1 4730 4873 -1553 4039 191 125 47 chr17 9468623 9469786 -80034767 + L1M4 LINE L1 14 1266 -5276 893 118 141 0 chr17 9469913 9470048 -80034505 + AluJb SINE Alu 137 290 -22 288 287 33 39 chr17 9470155 9470336 -80034217 + L1ME3A LINE L1 5105 5284 -1142 1174 255 20 3 chr17 9470356 9470709 -80033844 - L1M4 LINE L1 -2173 3973 3615 833 138 0 0 chr17 9470709 9470825 -80033728 + FLAM_C SINE Alu 1 116 -27 482 243 14 28 chr17 9470846 9470990 -80033563 - L1M4 LINE L1 -2522 3624 3483 * 2660 233 69 37 chr17 9470986 9471344 -80033209 - L1ME1 LINE L1 -5 6161 5816 1879 148 3 20 chr17 9471344 9471648 -80032905 + AluJo SINE Alu 1 299 -13 2660 233 69 37 chr17 9471648 9472100 -80032453 - L1ME1 LINE L1 -350 5816 5325 2854 75 3 24 chr17 9472330 9472702 -80031851 + THE1B LTR MaLR 1 364 0 340 211 16 12 chr17 9472778 9472858 -80031695 + L1ME3A LINE L1 5259 5340 -1086 2084 106 4 0 chr17 9472858 9473123 -80031430 + AluSp SINE Alu 1 266 -47 2556 61 0 3 chr17 9473162 9473472 -80031081 + AluY SINE Alu 1 309 -2 363 264 67 1 chr17 9473474 9473693 -80030860 + L1ME3A LINE L1 5482 5716 -728 375 319 94 47 chr17 9473693 9473884 -80030669 + L1ME3A LINE L1 6244 6443 -7 2348 104 0 3 chr17 9473918 9474227 -80030326 + AluSg SINE Alu 1 308 -2 1966 198 8 45 chr17 9474645 9474719 -80029834 - Charlie4a DNA MER1_type -1456 505 430 200 35 35 0 chr17 9474719 9474748 -80029805 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 2234 46 0 4 chr17 9474748 9475009 -80029544 - AluY SINE Alu -51 260 1 1966 198 8 45 chr17 9475009 9475418 -80029135 - Charlie4a DNA MER1_type -1529 432 39 1940 103 72 0 chr17 9476261 9476697 -80027856 + AluSx SINE Alu 1 455 0 1972 128 28 14 chr17 9476708 9476996 -80027557 + AluSc SINE Alu 1 292 -17 751 272 25 20 chr17 9476996 9477198 -80027355 + MIR SINE MIR 60 262 0 1053 202 5 10 chr17 9477353 9477561 -80026992 + AluJo SINE Alu 85 291 -21 2276 122 0 7 chr17 9477747 9478050 -80026503 + AluSq SINE Alu 1 301 -12 2398 167 95 6 chr17 9478050 9478553 -80026000 - MER74A LTR ERVL -10 548 1 800 248 25 95 chr17 9478653 9478927 -80025626 + MIR SINE MIR 7 261 -1 684 306 40 99 chr17 9478923 9479328 -80025225 + L2 LINE L2 2891 3271 -1 * 969 243 78 51 chr17 9480326 9480871 -80023682 + MER20B DNA MER1_type 2 531 -252 2184 132 0 7 chr17 9480871 9481181 -80023372 - AluSx SINE Alu -4 308 1 969 243 78 51 chr17 9481181 9481286 -80023267 + MER20B DNA MER1_type 531 632 -151 2394 93 3 0 chr17 9481286 9481596 -80022957 - AluSx SINE Alu -1 311 1 969 243 78 51 chr17 9481596 9481631 -80022922 + MER20B DNA MER1_type 632 752 -31 462 261 171 25 chr17 9482043 9482242 -80022311 - MIR SINE MIR -27 235 8 986 190 6 0 chr17 9482242 9482416 -80022137 + AluJb SINE Alu 133 307 -5 2406 85 3 0 chr17 9482563 9482857 -80021696 + AluSp SINE Alu 7 301 -12 293 320 50 30 chr17 9483019 9483119 -80021434 + L2 LINE L2 3197 3298 -15 3902 142 24 39 chr17 9483128 9483401 -80021152 - L1MB8 LINE L1 -5 6173 5898 2309 104 0 3 chr17 9483401 9483709 -80020844 - AluSc SINE Alu -2 307 1 3902 142 24 39 chr17 9483709 9484188 -80020365 - L1MB8 LINE L1 -280 5898 5432 292 381 45 0 chr17 9484231 9484365 -80020188 - MIR3 SINE MIR -19 189 50 800 177 61 61 chr17 9484488 9484598 -80019955 + AluJo SINE Alu 2 114 -198 2304 85 6 38 chr17 9484598 9484914 -80019639 + AluY SINE Alu 1 306 -5 800 177 61 61 chr17 9484914 9484984 -80019569 + AluJo SINE Alu 113 182 -130 699 117 27 0 chr17 9485065 9485176 -80019377 + FRAM SINE Alu 57 170 -6 181 313 47 0 chr17 9485252 9485316 -80019237 - MIR SINE MIR -30 232 166 361 293 63 26 chr17 9485334 9485525 -80019028 + HAL1b LINE L1 482 679 -669 1660 163 0 45 chr17 9485577 9485866 -80018687 + AluJb SINE Alu 1 276 -36 251 179 60 0 chr17 9485868 9485935 -80018618 + C-rich Low_complexity Low_complexity 4 74 0 23 54 0 0 chr17 9486926 9486963 -80017590 + GC_rich Low_complexity Low_complexity 1 37 0 209 140 0 40 chr17 9487339 9487389 -80017164 + (CCCCG)n Simple_repeat Simple_repeat 2 49 0 304 273 12 31 chr17 9489603 9489764 -80014789 + G-rich Low_complexity Low_complexity 5 162 0 597 136 27 20 chr17 9489789 9489936 -80014617 + GA-rich Low_complexity Low_complexity 1 148 0 372 282 24 40 chr17 9490155 9490279 -80014274 + L2 LINE L2 3146 3267 -5 428 256 41 33 chr17 9491204 9491325 -80013228 - AluJb SINE Alu -70 242 121 375 274 34 8 chr17 9491475 9491592 -80012961 - L1ME LINE L1 -440 5722 5603 2255 111 7 0 chr17 9491669 9491976 -80012577 + AluSp SINE Alu 1 309 -4 1551 164 45 16 chr17 9492091 9492402 -80012151 + L1MA9 LINE L1 5993 6312 0 22 56 0 0 chr17 9494032 9494068 -80010485 + GC_rich Low_complexity Low_complexity 1 36 0 1255 129 0 6 chr17 9495766 9495944 -80008609 - AluSg/x SINE Alu -12 300 124 270 0 0 0 chr17 9495945 9495975 -80008578 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2302 88 3 0 chr17 9495975 9496259 -80008294 - AluSx SINE Alu -27 285 1 275 256 24 80 chr17 9496927 9497052 -80007501 - MARNA DNA Mariner -13 573 456 562 292 73 19 chr17 9497067 9497327 -80007226 + MARNA DNA Mariner 193 466 -120 450 258 78 8 chr17 9497485 9497613 -80006940 + MIR SINE MIR 9 145 -117 2199 110 10 3 chr17 9497616 9497924 -80006629 + AluSx SINE Alu 1 310 -2 23 33 0 0 chr17 9497925 9497955 -80006598 + AT_rich Low_complexity Low_complexity 1 30 0 192 243 0 0 chr17 9498580 9498654 -80005899 + C-rich Low_complexity Low_complexity 1 74 0 265 38 0 57 chr17 9498755 9498808 -80005745 + AluY SINE Alu 251 300 0 1150 292 181 35 chr17 9498842 9499080 -80005473 + L1 LINE L1 4281 4483 -1663 2348 101 13 3 chr17 9499080 9499388 -80005165 + AluSx SINE Alu 1 311 -1 1150 292 181 35 chr17 9499388 9500111 -80004442 + L1 LINE L1 4483 5382 -764 488 277 97 59 chr17 9500231 9500737 -80003816 - L1ME4a LINE L1 -215 5906 5382 435 369 110 19 chr17 9500792 9501155 -80003398 - L1ME4a LINE L1 -865 5281 4886 1913 164 0 19 chr17 9502208 9502526 -80002027 - AluJo SINE Alu 0 312 1 419 305 17 42 chr17 9503242 9503419 -80001134 + MIR SINE MIR 24 196 -62 432 55 0 0 chr17 9503898 9503953 -80000600 + (TCCA)n Simple_repeat Simple_repeat 1 55 0 346 278 152 63 chr17 9503956 9504258 -80000295 - L2 LINE L2 -12 3260 2932 233 234 0 32 chr17 9505013 9505107 -79999446 + G-rich Low_complexity Low_complexity 3 93 0 630 270 98 14 chr17 9505293 9505508 -79999045 + MIR SINE MIR 30 262 0 1291 156 0 62 chr17 9505577 9505738 -79998815 - AluJb SINE Alu -18 294 149 2205 117 0 3 chr17 9505738 9506037 -79998516 - AluSq SINE Alu -15 298 1 1291 156 0 62 chr17 9506037 9506099 -79998454 - AluJb SINE Alu -163 149 85 1027 177 11 11 chr17 9506113 9506294 -79998259 - AluJo SINE Alu -12 300 120 503 331 62 0 chr17 9506384 9506562 -79997991 - MIR SINE MIR -42 220 32 2460 96 0 3 chr17 9506736 9507050 -79997503 + AluSp SINE Alu 1 313 0 501 300 69 55 chr17 9507440 9507930 -79996623 - L2 LINE L2 -386 2928 2432 281 325 182 41 chr17 9508522 9508891 -79995662 - L2 LINE L2 -1816 1498 1078 391 254 0 37 chr17 9508986 9509152 -79995401 - MER3 DNA MER1_type 0 209 5 2411 91 3 10 chr17 9509536 9509845 -79994708 - AluSq SINE Alu -6 307 1 185 0 0 39 chr17 9509849 9509875 -79994678 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2261 124 0 6 chr17 9510191 9510505 -79994048 - AluSx SINE Alu 0 312 1 736 270 42 21 chr17 9510520 9510757 -79993796 - MIR SINE MIR -6 256 15 200 217 22 18 chr17 9511052 9511119 -79993434 + MIR SINE MIR 52 119 -89 675 157 5 38 chr17 9511257 9511442 -79993111 + CT-rich Low_complexity Low_complexity 2 180 0 833 102 34 23 chr17 9511465 9511641 -79992912 + CT-rich Low_complexity Low_complexity 1 178 0 1565 202 3 37 chr17 9511649 9511971 -79992582 - AluJo SINE Alu -1 311 1 21 36 0 0 chr17 9512215 9512243 -79992310 + AT_rich Low_complexity Low_complexity 1 28 0 2188 113 0 13 chr17 9512244 9512545 -79992008 - AluSx SINE Alu -9 303 7 306 241 65 0 chr17 9512678 9512770 -79991783 - MIR SINE MIR -62 146 57 1370 119 0 0 chr17 9512791 9513004 -79991549 + AluSg/x SINE Alu 105 317 0 381 283 26 53 chr17 9513010 9513162 -79991391 + L2 LINE L2 2923 3070 -243 293 283 57 9 chr17 9513825 9513931 -79990622 + MIR3 SINE MIR 91 201 -7 1514 192 136 41 chr17 9514550 9514684 -79989869 - MLT1D LTR MaLR -2 503 383 2943 171 4 17 chr17 9514684 9515215 -79989338 - MER1A DNA MER1_type 0 527 4 1514 192 136 41 chr17 9515215 9515522 -79989031 - MLT1D LTR MaLR -122 383 20 442 205 34 17 chr17 9515525 9515642 -79988911 - AluSg/x SINE Alu -22 287 169 1515 167 38 71 chr17 9515759 9516055 -79988498 + L1MB8 LINE L1 5825 6108 -70 2181 101 30 3 chr17 9516055 9516353 -79988200 - AluSq SINE Alu -7 306 1 1515 167 38 71 chr17 9516353 9516421 -79988132 + L1MB8 LINE L1 6108 6177 -1 652 247 23 11 chr17 9516424 9516598 -79987955 - MIR SINE MIR -69 193 18 2157 93 32 39 chr17 9516801 9517113 -79987440 - AluSg SINE Alu 0 310 1 230 333 29 0 chr17 9518159 9518264 -79986289 - MIR3 SINE MIR -25 183 76 189 0 0 0 chr17 9518264 9518285 -79986268 + (TGGG)n Simple_repeat Simple_repeat 2 22 0 2269 96 6 16 chr17 9519793 9520107 -79984446 - AluSx SINE Alu -1 311 1 290 282 11 39 chr17 9520446 9520683 -79983870 + (CGGGG)n Simple_repeat Simple_repeat 1 230 0 212 333 9 9 chr17 9520724 9520829 -79983724 + G-rich Low_complexity Low_complexity 1 105 0 341 305 20 9 chr17 9521446 9521598 -79982955 - MIR SINE MIR -62 146 42 266 326 50 39 chr17 9521945 9522126 -79982427 - L3 LINE CR1 -7 1570 1388 512 241 176 6 chr17 9522353 9522523 -79982030 + MIR SINE MIR 8 206 -56 407 278 87 0 chr17 9522675 9522790 -79981763 + L1ME4a LINE L1 5803 5927 -194 298 267 38 0 chr17 9522794 9522899 -79981654 + L1ME4a LINE L1 5967 6075 -46 2357 78 34 7 chr17 9523459 9523754 -79980799 - AluSx SINE Alu -9 303 1 296 342 76 6 chr17 9524098 9524256 -79980297 - L3 LINE CR1 -310 1267 1099 180 0 0 0 chr17 9524429 9524449 -79980104 + (TA)n Simple_repeat Simple_repeat 2 21 0 2308 77 52 0 chr17 9524449 9524735 -79979818 - AluSx SINE Alu -11 301 1 340 244 122 9 chr17 9524740 9524855 -79979698 - L1ME LINE L1 -315 5806 5679 827 254 21 5 chr17 9525102 9525291 -79979262 + MER82 DNA MER2_type 1 192 -461 2122 97 0 0 chr17 9525294 9525553 -79979000 + AluSg SINE Alu 1 259 -51 327 279 0 0 chr17 9525577 9525656 -79978897 + Charlie4 DNA MER1_type 1880 1958 -3 288 0 0 0 chr17 9526074 9526106 -79978447 + (T)n Simple_repeat Simple_repeat 1 32 0 414 283 68 60 chr17 9526219 9526301 -79978252 + L1ME4a LINE L1 5351 5431 -690 2550 84 0 0 chr17 9526301 9526609 -79977944 - AluSg SINE Alu -2 308 1 414 283 68 60 chr17 9526609 9526777 -79977776 + L1ME4a LINE L1 5431 5603 -518 242 237 13 0 chr17 9526826 9526902 -79977651 + (TA)n Simple_repeat Simple_repeat 2 78 0 448 327 33 19 chr17 9526906 9527120 -79977433 + L1ME4a LINE L1 5610 5826 -295 310 266 90 90 chr17 9527132 9527309 -79977244 + L1ME4a LINE L1 5859 6035 -86 2287 92 6 29 chr17 9527309 9527625 -79976928 - AluSx SINE Alu -3 309 1 1634 211 13 0 chr17 9527660 9527958 -79976595 + AluJb SINE Alu 3 304 -8 594 164 0 9 chr17 9527996 9528124 -79976429 + L1MB3 LINE L1 5665 5786 -385 1957 138 10 10 chr17 9528125 9528259 -79976294 + AluSx SINE Alu 1 134 -178 2576 63 0 0 chr17 9528259 9528558 -79975995 + AluY SINE Alu 1 299 -12 1957 138 10 10 chr17 9528558 9528713 -79975840 + AluSx SINE Alu 133 290 -22 1542 145 0 9 chr17 9528727 9528954 -79975599 + AluSx SINE Alu 1 225 -87 230 27 0 0 chr17 9528957 9528994 -79975559 + Alu SINE Alu 130 166 0 1798 138 75 11 chr17 9529004 9529128 -79975425 + L1MB3 LINE L1 5769 5884 -299 1750 76 5 0 chr17 9529128 9529338 -79975215 + AluSx SINE Alu 2 212 -100 1798 138 75 11 chr17 9529338 9529562 -79974991 + L1MB3 LINE L1 5884 6139 -44 2147 86 10 17 chr17 9529564 9529865 -79974688 + AluSp SINE Alu 1 299 -14 2134 106 0 4 chr17 9530376 9530649 -79973904 - AluSx SINE Alu -40 272 1 1000 265 89 84 chr17 9530656 9530821 -79973732 - L1M4 LINE L1 -3056 3090 2927 1035 149 0 12 chr17 9530821 9530989 -79973564 - FAM SINE Alu -9 166 1 1000 265 89 84 chr17 9530989 9531324 -79973229 - L1M4 LINE L1 -3219 2927 2595 1957 138 23 7 chr17 9531324 9531628 -79972925 - AluSx SINE Alu -3 309 1 1000 265 89 84 chr17 9531628 9531973 -79972580 - L1M4 LINE L1 -3551 2595 2236 2398 93 6 6 chr17 9531973 9532285 -79972268 + AluSx SINE Alu 1 312 0 1000 265 89 84 chr17 9532285 9532392 -79972161 - L1M4 LINE L1 -3910 2236 2131 219 253 11 11 chr17 9532441 9532532 -79972021 + T-rich Low_complexity Low_complexity 6 96 0 620 92 0 0 chr17 9532611 9532698 -79971855 + Alu SINE Alu 220 306 -6 310 349 103 18 chr17 9532757 9533038 -79971515 - L1M4 LINE L1 -1218 4928 4624 223 274 119 0 chr17 9533805 9533889 -79970664 + MIR SINE MIR 56 149 -113 228 184 214 41 chr17 9534120 9534218 -79970335 - MIR3 SINE MIR -23 185 71 195 42 0 0 chr17 9534300 9534324 -79970229 + (CA)n Simple_repeat Simple_repeat 2 25 0 297 305 0 11 chr17 9534357 9534452 -79970101 - MER5A DNA MER1_type -89 100 7 297 308 17 33 chr17 9535290 9535410 -79969143 + L3 LINE CR1 1446 1563 -14 24 53 0 0 chr17 9537452 9537490 -79967063 + AT_rich Low_complexity Low_complexity 1 38 0 2401 91 0 0 chr17 9538061 9538358 -79966195 + AluSq SINE Alu 1 297 -16 739 272 89 4 chr17 9538656 9538891 -79965662 - MIR SINE MIR -4 258 4 2441 81 10 0 chr17 9540144 9540439 -79964114 + AluSp SINE Alu 1 298 -15 1904 168 3 13 chr17 9540467 9540765 -79963788 + AluJb SINE Alu 1 295 -17 272 299 0 0 chr17 9540836 9540903 -79963650 - L2 LINE L2 0 3272 3206 436 171 136 0 chr17 9540923 9541011 -79963542 - FLAM_A SINE Alu -41 101 2 938 209 133 4 chr17 9541577 9541802 -79962751 + MER82 DNA MER2_type 361 614 -39 2412 122 54 33 chr17 9542162 9542587 -79961966 + Tigger2a DNA MER2_type 1 434 0 1399 215 65 63 chr17 9542759 9542884 -79961669 + MLT1C LTR MaLR 6 129 -338 2335 82 3 10 chr17 9542884 9543187 -79961366 + AluSg SINE Alu 1 301 -9 1399 215 65 63 chr17 9543187 9543522 -79961031 + MLT1C LTR MaLR 129 467 0 2290 108 0 10 chr17 9543546 9543843 -79960710 + AluSx SINE Alu 1 294 -18 1170 272 58 21 chr17 9544026 9544692 -79959861 + L1ME3A LINE L1 5174 5862 -308 2376 107 0 0 chr17 9544944 9545254 -79959299 + AluSg SINE Alu 1 310 0 312 241 135 21 chr17 9545891 9546032 -79958521 + LTR67 LTR ERVL 401 557 0 1219 186 5 5 chr17 9546246 9546466 -79958087 - MER58A DNA MER1_type 0 224 5 219 319 165 16 chr17 9547040 9547228 -79957325 + MIR SINE MIR 33 248 -14 195 42 0 0 chr17 9547240 9547264 -79957289 + (ATG)n Simple_repeat Simple_repeat 3 26 0 2254 89 0 4 chr17 9547304 9547585 -79956968 + AluSx SINE Alu 1 280 -32 717 12 0 0 chr17 9547587 9547669 -79956884 + (GGAA)n Simple_repeat Simple_repeat 3 84 0 253 251 14 0 chr17 9547914 9547985 -79956568 + MIR SINE MIR 49 120 -88 531 205 0 27 chr17 9548027 9548139 -79956414 - MER5A DNA MER1_type -80 109 1 2621 44 10 0 chr17 9548805 9549100 -79955453 + AluY SINE Alu 1 298 -13 310 313 188 17 chr17 9549143 9549319 -79955234 + L3 LINE CR1 1020 1225 -352 2544 66 0 16 chr17 9550835 9551139 -79953414 - AluY SINE Alu -12 299 1 838 177 11 0 chr17 9551153 9551334 -79953219 + L1M4 LINE L1 5298 5480 -704 1682 188 22 4 chr17 9551340 9551651 -79952902 + AluJo SINE Alu 1 316 0 2297 75 7 0 chr17 9551651 9551972 -79952581 + AluSx SINE Alu 2 324 0 425 284 39 44 chr17 9551975 9552179 -79952374 + L2 LINE L2 2923 3125 -188 382 273 9 0 chr17 9552479 9552592 -79951961 + MER20B DNA MER1_type 81 197 -22 2548 80 3 0 chr17 9552622 9552934 -79951619 - AluSp SINE Alu 0 313 1 257 255 64 21 chr17 9553880 9553974 -79950579 - MIR SINE MIR -88 174 77 4141 165 57 25 chr17 9554628 9555435 -79949118 + MER21B LTR ERV1 1 833 -30 2277 114 0 3 chr17 9556197 9556504 -79948049 - AluSx SINE Alu -6 306 1 658 295 71 4 chr17 9556875 9557156 -79947397 + L3 LINE CR1 733 1032 -545 2152 130 10 0 chr17 9557239 9557539 -79947014 - AluSx SINE Alu -9 303 1 570 308 120 39 chr17 9557610 9557993 -79946560 + MLT1L LTR MaLR 171 584 -31 256 327 10 0 chr17 9558043 9558144 -79946409 + L3 LINE CR1 1066 1167 -410 988 103 0 0 chr17 9558287 9558413 -79946140 - AluSg/x SINE Alu -48 264 139 2111 86 17 0 chr17 9558787 9559088 -79945465 - AluY SINE Alu -5 306 1 752 287 88 35 chr17 9559246 9559699 -79944854 - MLT1J LTR MaLR -33 478 2 250 236 18 0 chr17 9559759 9559814 -79944739 + MIR SINE MIR 111 166 -96 509 221 30 8 chr17 9559894 9560025 -79944528 - L2 LINE L2 0 3313 3180 773 154 0 29 chr17 9560360 9560496 -79944057 + FLAM_A SINE Alu 1 132 -1 371 295 78 78 chr17 9560512 9560756 -79943797 - L2 LINE L2 -6 3266 3023 395 280 0 24 chr17 9560768 9560893 -79943660 + (CAT)n Simple_repeat Simple_repeat 2 123 0 375 212 15 15 chr17 9560919 9561056 -79943497 + (CACCAT)n Simple_repeat Simple_repeat 4 140 0 657 299 29 25 chr17 9561104 9561308 -79943245 - MIR SINE MIR -18 244 40 412 329 68 19 chr17 9561387 9561709 -79942844 - L2 LINE L2 -342 2972 2635 446 276 118 54 chr17 9563024 9563206 -79941347 - MIR SINE MIR -8 254 54 2218 95 7 0 chr17 9563206 9563510 -79941043 - AluSx SINE Alu -6 306 1 446 276 118 54 chr17 9563510 9563548 -79941005 - MIR SINE MIR -208 54 20 2456 68 0 3 chr17 9563623 9563933 -79940620 - AluY SINE Alu -2 309 1 2183 189 55 121 chr17 9563945 9564795 -79939758 - L1MC4a LINE L1 0 7811 7113 286 371 30 8 chr17 9564803 9564935 -79939618 - MER5A DNA MER1_type 0 189 55 2129 120 3 0 chr17 9564943 9565243 -79939310 + AluSx SINE Alu 2 302 -10 9771 95 31 33 chr17 9565243 9565902 -79938651 + Tigger1 DNA MER2_type 951 1610 -808 2237 89 0 3 chr17 9565902 9566205 -79938348 + AluSq SINE Alu 1 302 -11 9771 95 31 33 chr17 9566205 9567012 -79937541 + Tigger1 DNA MER2_type 1610 2414 -4 1716 188 23 53 chr17 9567016 9567082 -79937471 - L1M4 LINE L1 -538 5646 5580 1802 178 3 0 chr17 9567082 9567391 -79937162 - AluJb SINE Alu 0 312 3 1716 188 23 53 chr17 9567391 9567867 -79936686 - L1M4 LINE L1 -604 5580 5122 799 269 20 20 chr17 9567962 9568308 -79936245 - L1M4 LINE L1 -2768 3378 3033 2141 104 0 3 chr17 9569366 9569663 -79934890 + AluSx SINE Alu 5 300 -12 283 295 74 68 chr17 9569687 9570019 -79934534 + L1 LINE L1 2831 3159 -2987 2159 93 3 13 chr17 9570019 9570320 -79934233 + AluSp SINE Alu 2 299 -14 283 295 74 68 chr17 9570320 9570376 -79934177 + L1 LINE L1 3159 3213 -2933 348 273 91 59 chr17 9570376 9570629 -79933924 + MIR SINE MIR 2 262 0 283 295 74 68 chr17 9570629 9571096 -79933457 + L1 LINE L1 3213 3675 -2471 2217 85 7 0 chr17 9571096 9571389 -79933164 - AluSg SINE Alu -15 295 1 873 182 55 12 chr17 9571395 9571560 -79932993 - FAM SINE Alu -3 172 1 283 295 74 68 chr17 9571560 9571614 -79932939 + L1 LINE L1 3679 3755 -2391 862 261 132 17 chr17 9571735 9571885 -79932668 + L1ME3A LINE L1 5777 5908 -262 2460 62 0 0 chr17 9571885 9572192 -79932361 + AluY SINE Alu 3 309 -2 862 261 132 17 chr17 9572192 9572390 -79932163 + L1ME3A LINE L1 5908 6165 -5 2289 109 0 0 chr17 9572406 9572718 -79931835 + AluSx SINE Alu 1 312 0 409 214 11 0 chr17 9572726 9572815 -79931738 + MIR SINE MIR 162 251 -11 300 282 100 18 chr17 9572977 9573087 -79931466 - MIR SINE MIR -133 129 11 2410 71 3 3 chr17 9573183 9573494 -79931059 - AluSp SINE Alu -2 311 1 770 185 0 7 chr17 9573504 9573639 -79930914 - FLAM_C SINE Alu -8 135 2 198 0 0 0 chr17 9573728 9573750 -79930803 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2036 125 7 0 chr17 9573876 9574172 -79930381 + AluSx SINE Alu 1 298 -14 1863 122 15 61 chr17 9575140 9575467 -79929086 - AluSx SINE Alu 0 312 1 350 323 112 31 chr17 9575597 9575758 -79928795 + MER117 DNA MER1_type 1 174 -23 2271 89 13 0 chr17 9576361 9576665 -79927888 - AluSg SINE Alu -2 308 1 2024 106 10 0 chr17 9577121 9577413 -79927140 - AluSc SINE Alu -14 295 1 1212 112 28 6 chr17 9577414 9577593 -79926960 - MSTA LTR MaLR -229 199 17 1039 204 44 54 chr17 9577629 9577923 -79926630 + L1ME3A LINE L1 5827 6117 -53 1452 241 62 63 chr17 9578176 9579138 -79925415 + L1MD3 LINE L1 5338 6001 -1994 3195 181 67 44 chr17 9578249 9578451 -79926102 + L1MB8 LINE L1 5415 5611 -567 2114 114 7 0 chr17 9578451 9578749 -79925804 - AluSx SINE Alu -10 302 3 3195 181 67 44 chr17 9578749 9579293 -79925260 + L1MB8 LINE L1 5611 6178 0 1408 161 11 46 chr17 9579395 9579680 -79924873 + AluJo SINE Alu 33 307 -5 2808 240 77 38 chr17 9579696 9580971 -79923582 + L1ME1 LINE L1 3956 6161 -5 200 277 60 0 chr17 9581227 9581310 -79923243 + (TAAA)n Simple_repeat Simple_repeat 3 90 0 260 320 36 23 chr17 9581361 9581580 -79922973 + L1M4 LINE L1 4795 5016 -1130 516 265 28 22 chr17 9581582 9581763 -79922790 + L1MEd LINE L1 4 185 -5934 294 309 12 0 chr17 9581883 9581967 -79922586 + L1MEd LINE L1 244 328 -5791 203 191 24 0 chr17 9581967 9582009 -79922544 - L2 LINE L2 -5 3308 3266 292 88 35 0 chr17 9582211 9582268 -79922285 + GA-rich Low_complexity Low_complexity 1 59 0 665 277 145 21 chr17 9582271 9582702 -79921851 - L2 LINE L2 -214 3099 2610 744 315 56 45 chr17 9582713 9583227 -79921326 + L1MEd LINE L1 331 850 -5269 713 250 123 4 chr17 9583216 9583452 -79921101 + L1ME3 LINE L1 5859 6122 -40 * 353 154 46 0 chr17 9583789 9583854 -79920699 - MIR SINE MIR -55 153 86 972 150 6 6 chr17 9583925 9584092 -79920461 + FRAM SINE Alu 10 176 0 874 168 0 7 chr17 9584243 9584398 -79920155 + FRAM SINE Alu 1 151 -25 360 57 0 0 chr17 9584405 9584458 -79920095 + L1MB3 LINE L1 6127 6179 -4 2359 94 0 0 chr17 9585190 9585497 -79919056 + AluSc SINE Alu 1 307 -2 2229 84 0 7 chr17 9586233 9586532 -79918021 - AluSx SINE Alu -15 297 1 239 258 0 32 chr17 9586966 9587028 -79917525 + MIR SINE MIR 182 241 -21 1419 110 10 5 chr17 9588104 9588313 -79916240 - AluSg/x SINE Alu -18 292 83 183 42 0 0 chr17 9588557 9588581 -79915972 + (TATAA)n Simple_repeat Simple_repeat 4 27 0 246 156 0 0 chr17 9588688 9588733 -79915820 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 525 309 49 10 chr17 9588744 9588948 -79915605 + MIR SINE MIR 8 219 -43 197 244 0 0 chr17 9589011 9589056 -79915497 - L2 LINE L2 -15 3257 3213 219 229 0 21 chr17 9591247 9591295 -79913258 + GA-rich Low_complexity Low_complexity 4 50 0 21 36 0 0 chr17 9592794 9592822 -79911731 + GC_rich Low_complexity Low_complexity 1 28 0 3212 124 15 35 chr17 9594815 9595084 -79909469 - L1MB3 LINE L1 -8 6175 5902 2065 117 0 10 chr17 9595084 9595392 -79909161 - AluSx SINE Alu -7 305 1 3212 124 15 35 chr17 9595392 9595515 -79909038 - L1MB3 LINE L1 -281 5902 5778 2674 82 36 6 chr17 9595515 9595879 -79908674 - THE1C LTR MaLR 0 375 1 3212 124 15 35 chr17 9595879 9596032 -79908521 - L1MB3 LINE L1 -405 5778 5640 2464 221 90 37 chr17 9596042 9596632 -79907921 - L1ME3A LINE L1 0 6170 5530 2585 92 19 29 chr17 9596632 9597011 -79907542 + THE1C LTR MaLR 1 375 0 2464 221 90 37 chr17 9597011 9597177 -79907376 - L1ME3A LINE L1 -640 5530 5374 1501 140 49 18 chr17 9597190 9597475 -79907078 - AluJo SINE Alu -18 294 1 206 355 57 87 chr17 9597935 9598301 -79906252 - L2 LINE L2 -1 3271 2917 2005 109 0 20 chr17 9598594 9598898 -79905655 + AluSc SINE Alu 1 298 -11 314 193 28 92 chr17 9598968 9599077 -79905476 - L1MCa LINE L1 -4361 2065 1964 823 146 0 29 chr17 9599081 9599218 -79905335 + FLAM_C SINE Alu 1 133 0 310 245 128 20 chr17 9599234 9599336 -79905217 + HAL1b LINE L1 1232 1344 -4 238 227 91 18 chr17 9599514 9599624 -79904929 + L1ME4a LINE L1 5599 5716 -405 242 154 0 15 chr17 9599627 9599692 -79904861 + GA-rich Low_complexity Low_complexity 4 67 0 430 291 67 32 chr17 9599692 9599776 -79904777 + L1ME4a LINE L1 5724 5804 -317 2044 91 10 14 chr17 9599776 9600073 -79904480 - AluSq SINE Alu -17 296 1 430 291 67 32 chr17 9600073 9600332 -79904221 + L1ME4a LINE L1 5804 6079 -42 2087 121 7 7 chr17 9601543 9601849 -79902704 - AluSg SINE Alu -2 308 3 255 312 64 29 chr17 9602349 9602522 -79902031 + L1 LINE L1 4045 4223 -1923 2439 68 0 3 chr17 9602523 9602833 -79901720 + AluY SINE Alu 1 309 -2 1595 117 73 4 chr17 9603684 9603931 -79900622 - AluSx SINE Alu -15 297 34 2117 104 7 3 chr17 9603951 9604249 -79900304 - AluSx SINE Alu -13 299 1 2216 92 0 3 chr17 9604326 9604620 -79899933 - AluSg SINE Alu -17 293 1 839 182 0 0 chr17 9604693 9604825 -79899728 - FLAM_A SINE Alu 0 133 2 21 0 0 0 chr17 9605108 9605129 -79899424 + AT_rich Low_complexity Low_complexity 1 21 0 400 315 122 20 chr17 9605264 9605559 -79898994 - L2 LINE L2 -1 3312 2988 2068 120 0 0 chr17 9605730 9606022 -79898531 + AluSx SINE Alu 1 292 -20 900 161 62 0 chr17 9606031 9606192 -79898361 + AluJb SINE Alu 121 291 -21 239 336 182 21 chr17 9606194 9606727 -79897826 - L2 LINE L2 -618 2696 2078 200 170 19 0 chr17 9606727 9606780 -79897773 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 2164 53 11 7 chr17 9607128 9607411 -79897142 + AluY SINE Alu 12 295 -16 2192 88 7 3 chr17 9607567 9607862 -79896691 + AluSq SINE Alu 1 296 -17 21 0 0 0 chr17 9608066 9608087 -79896466 + AT_rich Low_complexity Low_complexity 1 21 0 2163 118 0 3 chr17 9608962 9609246 -79895307 + AluSg SINE Alu 1 290 -20 241 35 0 0 chr17 9609246 9609275 -79895278 + (CAAAA)n Simple_repeat Simple_repeat 2 175 0 2163 118 0 3 chr17 9609275 9609296 -79895257 + AluSg SINE Alu 290 310 0 610 192 245 0 chr17 9609321 9609472 -79895081 + MER5A DNA MER1_type 1 188 -1 2469 82 0 0 chr17 9609973 9610267 -79894286 - AluSc SINE Alu -13 296 3 2737 154 2 7 chr17 9610439 9610875 -79893678 - Tigger2a DNA MER2_type 0 434 1 3093 161 31 27 chr17 9611131 9611716 -79892837 - L1MB5 LINE L1 0 6174 5588 1034 242 8 4 chr17 9611861 9612101 -79892452 - MIR SINE MIR -16 246 6 306 73 0 0 chr17 9612280 9612321 -79892232 + (T)n Simple_repeat Simple_repeat 1 41 0 270 205 156 74 chr17 9612321 9612443 -79892110 - MIR SINE MIR -14 248 117 585 103 41 0 chr17 9612668 9612765 -79891788 + L1PB3 LINE L1 6053 6153 -1 2025 136 0 7 chr17 9612775 9613077 -79891476 + AluSx SINE Alu 1 300 -12 2204 101 10 0 chr17 9614608 9614896 -79889657 + AluSq SINE Alu 4 294 -19 1395 163 6 131 chr17 9614899 9615243 -79889310 + AluJb SINE Alu 2 302 0 523 289 41 5 chr17 9615284 9615502 -79889051 + L2 LINE L2 2843 3068 -245 322 165 12 12 chr17 9615701 9615786 -79888767 + (TGAA)n Simple_repeat Simple_repeat 1 85 0 258 339 59 0 chr17 9617278 9617396 -79887157 - L2 LINE L2 -4 3268 3144 1388 159 14 0 chr17 9617689 9617903 -79886650 - MER58A DNA MER1_type -1 223 7 3044 223 26 41 chr17 9618031 9618166 -79886387 - MSTD-int LTR MaLR -1013 722 586 743 126 0 0 chr17 9618166 9618269 -79886284 - U6 snRNA snRNA -2 105 3 3044 223 26 41 chr17 9618269 9618865 -79885688 - MSTD-int LTR MaLR -1149 586 2 739 179 30 65 chr17 9618868 9619036 -79885517 - MSTD LTR MaLR -1 395 234 401 227 21 0 chr17 9620267 9620364 -79884189 - AluSg1 SINE Alu -209 100 2 1758 153 0 53 chr17 9620425 9620745 -79883808 - AluSx SINE Alu -9 303 1 1485 176 66 4 chr17 9620897 9621170 -79883383 - Tigger3(Golem) DNA MER2_type -11 3018 2729 2110 121 0 0 chr17 9621170 9621450 -79883103 + AluSg SINE Alu 1 280 -30 225 287 46 0 chr17 9621680 9621767 -79882786 - Tigger5 DNA MER2_type -5 2318 2228 1714 155 76 10 chr17 9621867 9622170 -79882383 + MER31A LTR ERV1 158 480 -5 2307 112 0 0 chr17 9623239 9623542 -79881011 + AluSx SINE Alu 1 303 -9 479 241 102 89 chr17 9624363 9624757 -79879796 - HAL1 LINE L1 -740 1767 1369 445 262 22 142 chr17 9624746 9624923 -79879630 - HAL1 LINE L1 -1431 1076 964 * 1430 74 5 0 chr17 9624923 9625112 -79879441 + L1PA6 LINE L1 5960 6149 -5 445 262 22 142 chr17 9625112 9625301 -79879252 - HAL1 LINE L1 -1543 964 754 186 43 0 0 chr17 9625452 9625475 -79879078 + (T)n Simple_repeat Simple_repeat 1 23 0 1785 148 50 7 chr17 9625758 9626035 -79878518 + AluJo SINE Alu 5 293 -19 2349 82 0 19 chr17 9626038 9626353 -79878200 + AluSg SINE Alu 1 309 -1 1267 120 0 11 chr17 9626824 9627007 -79877546 + AluSg/x SINE Alu 112 292 -18 455 295 76 9 chr17 9627027 9627251 -79877302 - MIR SINE MIR -1 261 23 23 0 0 0 chr17 9628607 9628630 -79875923 + AT_rich Low_complexity Low_complexity 1 23 0 1970 98 0 0 chr17 9628789 9629044 -79875509 + AluSc SINE Alu 41 295 -14 235 133 17 17 chr17 9629048 9629108 -79875445 + A-rich Low_complexity Low_complexity 1 60 0 1973 232 87 33 chr17 9629108 9629661 -79874892 + MER72 LTR ERV1 83 673 -49 2054 120 3 20 chr17 9629661 9629962 -79874591 + AluSx SINE Alu 5 300 -12 1973 232 87 33 chr17 9629962 9630015 -79874538 + MER72 LTR ERV1 673 722 0 665 236 28 0 chr17 9630135 9630279 -79874274 + MER21B LTR ERV1 5 152 -711 1023 108 0 0 chr17 9630388 9630518 -79874035 - AluSg SINE Alu -179 131 2 234 0 0 0 chr17 9631516 9631542 -79873011 + (A)n Simple_repeat Simple_repeat 1 26 0 2911 213 83 8 chr17 9632822 9633457 -79871096 + MER21B LTR ERV1 121 803 -60 2137 104 37 0 chr17 9633986 9634283 -79870270 + AluY SINE Alu 1 308 -3 953 155 19 25 chr17 9634686 9634847 -79869706 - FRAM SINE Alu -5 161 2 1369 196 29 29 chr17 9635373 9635684 -79868869 + AluJb SINE Alu 1 311 -1 307 235 61 10 chr17 9635701 9635799 -79868754 + AluSp SINE Alu 3 105 -198 244 53 0 0 chr17 9635899 9635937 -79868616 + Alu SINE Alu 265 302 0 2440 81 16 0 chr17 9636284 9636592 -79867961 + AluSq SINE Alu 1 313 0 2341 167 16 11 chr17 9636709 9637086 -79867467 + MER44D DNA MER2_type 1 379 -326 1136 153 0 26 chr17 9637095 9637285 -79867268 + AluJo SINE Alu 17 201 -111 1022 118 53 21 chr17 9637287 9637365 -79867188 + Tigger7 DNA MER2_type 2178 2252 -235 198 0 0 0 chr17 9637365 9637387 -79867166 + (GA)n Simple_repeat Simple_repeat 1 22 0 1022 118 53 21 chr17 9637387 9637495 -79867058 + Tigger7 DNA MER2_type 2252 2370 -117 2316 97 0 7 chr17 9637495 9637803 -79866750 + AluSq SINE Alu 1 306 -7 1571 138 12 0 chr17 9637978 9638225 -79866328 + LTR48B LTR ERV1 7 256 -388 2477 73 0 3 chr17 9638226 9638528 -79866025 + AluY SINE Alu 3 303 -8 1993 82 0 0 chr17 9638750 9638994 -79865559 + AluSq SINE Alu 62 305 -8 1168 184 58 51 chr17 9639659 9639953 -79864600 - AluJo SINE Alu -11 301 6 228 133 0 0 chr17 9640299 9640364 -79864189 - Alu SINE Alu 0 318 254 681 199 164 59 chr17 9640527 9640783 -79863770 - MER102a DNA MER1_type -14 316 34 230 217 43 0 chr17 9640862 9640931 -79863622 + CT-rich Low_complexity Low_complexity 3 74 0 2294 84 0 14 chr17 9641088 9641384 -79863169 + AluSq SINE Alu 1 292 -21 191 225 0 0 chr17 9642757 9642797 -79861756 + MIR3 SINE MIR 154 193 -15 2112 82 0 38 chr17 9643056 9643386 -79861167 - AluY SINE Alu 0 319 1 2014 128 21 0 chr17 9643584 9643874 -79860679 - AluSx SINE Alu -16 296 1 23 33 0 0 chr17 9644290 9644320 -79860233 + AT_rich Low_complexity Low_complexity 1 30 0 28 48 0 0 chr17 9645242 9645284 -79859269 + AT_rich Low_complexity Low_complexity 1 42 0 2230 84 0 7 chr17 9645397 9645695 -79858858 + AluSx SINE Alu 11 306 -6 1509 121 117 16 chr17 9645958 9646237 -79858316 + AluSx SINE Alu 1 305 0 3029 179 10 62 chr17 9646864 9647040 -79857513 + L1MC3 LINE L1 5892 6076 -1709 2172 61 6 98 chr17 9647040 9647367 -79857186 + AluSq SINE Alu 1 297 -16 3029 179 10 62 chr17 9647367 9647754 -79856799 + L1MC3 LINE L1 6076 6417 -1368 2357 86 0 3 chr17 9647754 9648058 -79856495 + AluSg SINE Alu 1 303 -7 3029 179 10 62 chr17 9648058 9648173 -79856380 + L1MC3 LINE L1 6417 6536 -1249 907 144 77 62 chr17 9648173 9648332 -79856221 + L1MC3 LINE L1 6857 7021 -764 1988 124 12 50 chr17 9648332 9648654 -79855899 + AluSx SINE Alu 1 310 -2 907 144 77 62 chr17 9648654 9648702 -79855851 + L1MC3 LINE L1 7021 7067 -718 230 301 24 24 chr17 9648717 9648800 -79855753 + MLT1F1 LTR MaLR 36 118 -449 2732 184 59 9 chr17 9648800 9649361 -79855192 + L1MC3 LINE L1 7184 7772 -13 461 216 26 92 chr17 9649360 9649405 -79855148 + L1M4 LINE L1 4718 4764 -1382 * 1913 154 3 3 chr17 9649405 9649704 -79854849 + AluSx SINE Alu 1 299 -13 461 216 26 92 chr17 9649704 9649811 -79854742 + L1M4 LINE L1 4764 4860 -1286 229 306 0 0 chr17 9650011 9650101 -79854452 - MIR SINE MIR -85 123 33 2481 97 0 0 chr17 9650222 9650532 -79854021 + AluSx SINE Alu 1 310 -2 813 210 0 3 chr17 9650744 9651059 -79853494 + (TGGA)n Simple_repeat Simple_repeat 1 313 0 210 147 0 0 chr17 9651074 9651108 -79853445 + (CATA)n Simple_repeat Simple_repeat 2 35 0 217 353 0 47 chr17 9651858 9651943 -79852610 + L2 LINE L2 3157 3237 -35 2447 81 3 0 chr17 9652373 9652670 -79851883 + AluSp SINE Alu 1 298 -15 537 198 0 0 chr17 9652705 9652806 -79851747 - L1MD3 LINE L1 -15 7980 7880 247 183 76 53 chr17 9652995 9653126 -79851427 - Charlie7 DNA MER1_type 0 2612 2479 282 254 0 0 chr17 9653155 9653214 -79851339 - Charlie7 DNA MER1_type -2518 94 36 216 365 0 0 chr17 9653973 9654036 -79850517 + L2 LINE L2 3210 3272 0 794 221 113 63 chr17 9654562 9654577 -79849976 + HAL1 LINE L1 1121 1134 -1373 1825 150 6 42 chr17 9654577 9654721 -79849832 + AluJo SINE Alu 1 149 -163 2567 52 0 23 chr17 9654721 9655028 -79849525 + AluSg SINE Alu 1 300 -10 1825 150 6 42 chr17 9655028 9655196 -79849357 + AluJo SINE Alu 149 302 -10 794 221 113 63 chr17 9655196 9655560 -79848993 + HAL1 LINE L1 1134 1519 -988 829 247 116 86 chr17 9655596 9655909 -79848644 + HAL1 LINE L1 1728 2030 -477 2355 100 0 0 chr17 9655909 9656210 -79848343 + AluSg SINE Alu 1 301 -9 829 247 116 86 chr17 9656210 9656648 -79847905 + HAL1 LINE L1 2030 2501 -6 2500 247 87 61 chr17 9656829 9657346 -79847207 + L1MC4 LINE L1 6349 6851 -957 1692 137 14 41 chr17 9657346 9657638 -79846915 + AluJo SINE Alu 17 300 -12 2500 247 87 61 chr17 9657638 9657767 -79846786 + L1MC4 LINE L1 6851 6975 -833 1899 34 24 119 chr17 9657767 9658062 -79846491 + AluYb8 SINE Alu 41 307 -11 2500 247 87 61 chr17 9658062 9658347 -79846206 + L1MC4 LINE L1 6975 7251 -557 1818 154 3 10 chr17 9658347 9658640 -79845913 - AluJb SINE Alu 0 312 22 2500 247 87 61 chr17 9658640 9659061 -79845492 + L1MC4 LINE L1 7251 7675 -133 2032 117 10 7 chr17 9659071 9659369 -79845184 + AluSx SINE Alu 1 299 -13 198 0 0 0 chr17 9659705 9659727 -79844826 + (TTTTTG)n Simple_repeat Simple_repeat 1 22 0 571 285 44 33 chr17 9659839 9660109 -79844444 - L1ME1 LINE L1 -18 6148 5876 * 3816 211 119 36 chr17 9660085 9661189 -79843364 - L1MDb LINE L1 -4110 2296 1072 1614 192 4 0 chr17 9661189 9661465 -79843088 - AluJo SINE Alu -2 310 34 3816 211 119 36 chr17 9661465 9661791 -79842762 - L1MDb LINE L1 -5334 1072 775 298 225 51 87 chr17 9662160 9662298 -79842255 - L1MC4 LINE L1 0 8042 7910 26 0 0 0 chr17 9662339 9662365 -79842188 + AT_rich Low_complexity Low_complexity 1 26 0 2020 135 7 3 chr17 9662365 9662653 -79841900 - AluSx SINE Alu -23 289 1 378 288 66 47 chr17 9662752 9662964 -79841589 - L1MC4 LINE L1 -232 7810 7595 2437 65 0 36 chr17 9662965 9663273 -79841280 - AluSg SINE Alu -8 302 6 2275 109 0 0 chr17 9663288 9663582 -79840971 - AluSq SINE Alu -17 296 3 2358 101 0 0 chr17 9664994 9665300 -79839253 - AluSp SINE Alu -4 309 4 1567 174 6 59 chr17 9666681 9666774 -79837779 + AluJo SINE Alu 1 97 -215 2256 123 3 0 chr17 9666774 9667084 -79837469 + AluSq SINE Alu 1 311 -2 1567 174 6 59 chr17 9667084 9667312 -79837241 + AluJo SINE Alu 97 305 -7 2344 58 4 0 chr17 9668765 9669068 -79835485 - AluY SINE Alu 0 305 2 1134 182 81 8 chr17 9669181 9669417 -79835136 - MER33 DNA MER1_type -69 255 3 373 174 12 23 chr17 9669649 9669735 -79834818 - L1MB8 LINE L1 -1 6177 6093 432 117 62 0 chr17 9669804 9669949 -79834604 + (TA)n Simple_repeat Simple_repeat 1 154 0 2124 125 3 7 chr17 9669949 9670253 -79834300 + AluSq SINE Alu 1 303 -10 255 286 47 22 chr17 9670321 9670506 -79834047 - Charlie8 DNA MER1_type -2204 213 5 2302 99 0 0 chr17 9670850 9671142 -79833411 + AluSx SINE Alu 11 302 -10 2352 89 10 3 chr17 9672357 9672660 -79831893 - AluSg SINE Alu -5 305 1 2364 107 15 12 chr17 9673077 9673415 -79831138 + MER1B DNA MER1_type 1 339 0 2448 80 3 0 chr17 9673664 9673966 -79830587 + AluSx SINE Alu 1 303 -9 515 234 124 0 chr17 9674145 9674282 -79830271 - Charlie8 DNA MER1_type -2167 250 97 44 40 0 13 chr17 9674334 9674371 -79830182 + AT_rich Low_complexity Low_complexity 1 37 -38 188 35 35 0 chr17 9674371 9674400 -79830153 + (TA)n Simple_repeat Simple_repeat 1 30 0 44 40 0 13 chr17 9674400 9674438 -79830115 + AT_rich Low_complexity Low_complexity 37 75 0 2455 81 3 0 chr17 9674444 9674751 -79829802 + AluSp SINE Alu 1 308 -5 2204 91 0 27 chr17 9675730 9676028 -79828525 - AluY SINE Alu -21 290 1 349 279 48 30 chr17 9676296 9676309 -79828244 - MER5A DNA MER1_type -18 160 149 2460 72 0 0 chr17 9676309 9676600 -79827953 - AluY SINE Alu -9 302 12 349 279 48 30 chr17 9676600 9676753 -79827800 - MER5A DNA MER1_type -29 149 7 220 262 0 127 chr17 9677007 9677049 -79827504 + L2 LINE L2 2712 2758 -556 2428 92 0 0 chr17 9677049 9677352 -79827201 + AluSq SINE Alu 3 305 -8 220 262 0 127 chr17 9677352 9677435 -79827118 + L2 LINE L2 2758 2821 -493 2132 108 42 0 chr17 9677734 9678020 -79826533 + AluSx SINE Alu 1 298 -14 1743 157 3 7 chr17 9678667 9678961 -79825592 + AluSg SINE Alu 1 293 -17 228 151 14 55 chr17 9678973 9679046 -79825507 + GA-rich Low_complexity Low_complexity 3 72 0 264 111 0 0 chr17 9679543 9679588 -79824965 + (TG)n Simple_repeat Simple_repeat 1 45 0 301 216 169 14 chr17 9679710 9679858 -79824695 - L1ME4a LINE L1 -2 6119 5949 668 220 32 0 chr17 9679871 9680025 -79824528 + MSTD LTR MaLR 1 159 -237 3178 126 71 15 chr17 9680038 9680556 -79823997 - LTR10A LTR ERV1 -62 547 1 686 176 124 36 chr17 9680557 9680750 -79823803 + MSTD LTR MaLR 176 385 -11 4090 139 21 44 chr17 9680843 9681549 -79823004 + LTR8 LTR ERV1 2 691 0 2465 61 0 7 chr17 9681713 9682009 -79822544 + AluY SINE Alu 1 294 -17 1793 140 13 2 chr17 9682013 9682290 -79822263 + L1PA16 LINE L1 5867 6145 -21 251 177 190 25 chr17 9682536 9682615 -79821938 - L2 LINE L2 -39 3233 3142 21 0 0 0 chr17 9684126 9684147 -79820406 + AT_rich Low_complexity Low_complexity 1 21 0 1900 100 0 16 chr17 9685706 9685956 -79818597 + AluSc SINE Alu 1 246 -63 21 0 0 0 chr17 9685956 9685977 -79818576 + AT_rich Low_complexity Low_complexity 1 21 0 213 355 97 27 chr17 9686144 9686330 -79818223 + L3 LINE CR1 984 1182 -395 1334 164 35 87 chr17 9686370 9686546 -79818007 + MER58B DNA MER1_type 46 201 -2219 2278 70 3 67 chr17 9686546 9686877 -79817676 - AluY SINE Alu -1 310 1 1334 164 35 87 chr17 9686877 9687012 -79817541 + MER58B DNA MER1_type 201 341 0 478 237 164 13 chr17 9687022 9687174 -79817379 - MER5A DNA MER1_type -2 187 13 2260 88 17 7 chr17 9687264 9687559 -79816994 - AluSg SINE Alu -11 299 2 1818 80 0 36 chr17 9689162 9689412 -79815141 - AluY SINE Alu -15 296 56 373 196 107 0 chr17 9689626 9689738 -79814815 - L1MA8 LINE L1 -3 6288 6165 283 348 63 6 chr17 9690233 9690391 -79814162 + L2 LINE L2 2261 2427 -887 1243 213 115 37 chr17 9690481 9690894 -79813659 + MER66A LTR ERV1 100 448 -30 279 375 46 32 chr17 9690915 9691195 -79813358 + L2 LINE L2 2491 2774 -540 2272 86 0 7 chr17 9691221 9691512 -79813041 + AluSc SINE Alu 1 289 -20 226 313 12 12 chr17 9691682 9691765 -79812788 + L2 LINE L2 3017 3099 -173 454 179 12 0 chr17 9691901 9691985 -79812568 - L1MA10 LINE L1 -32 6302 6218 268 290 110 21 chr17 9692167 9692312 -79812241 - MIR SINE MIR -81 181 24 1068 62 8 0 chr17 9693929 9694059 -79810494 + AluSc SINE Alu 1 131 -178 230 73 24 0 chr17 9694059 9694100 -79810453 + (CAA)n Simple_repeat Simple_repeat 2 43 0 1052 65 0 0 chr17 9694155 9694278 -79810275 + AluSc SINE Alu 1 123 -186 1010 89 0 0 chr17 9694368 9694491 -79810062 + AluSc SINE Alu 1 123 -186 2474 77 0 0 chr17 9694575 9694874 -79809679 + AluY SINE Alu 1 299 -12 1687 182 26 6 chr17 9694887 9695228 -79809325 + L1MB4 LINE L1 5738 6085 -95 1082 269 4 4 chr17 9695373 9695618 -79808935 - AluSq SINE Alu -68 245 1 2331 82 7 0 chr17 9696020 9696313 -79808240 + AluY SINE Alu 4 298 -13 254 275 38 69 chr17 9696654 9696755 -79807798 + MER5B DNA MER1_type 4 102 -76 2247 182 72 115 chr17 9696755 9696902 -79807651 + LTR8A LTR ERV1 1 153 -574 2381 92 0 0 chr17 9696902 9697194 -79807359 - AluSg1 SINE Alu -17 292 1 2247 182 72 115 chr17 9697194 9697805 -79806748 + LTR8A LTR ERV1 153 727 0 254 275 38 69 chr17 9697805 9697834 -79806719 + MER5B DNA MER1_type 102 130 -48 436 183 11 11 chr17 9697880 9697973 -79806580 - MER5B DNA MER1_type -6 172 80 479 221 11 0 chr17 9697973 9698068 -79806485 + MER21B LTR ERV1 1 96 -767 1922 259 77 37 chr17 9698121 9698793 -79805760 + MER21B LTR ERV1 98 796 -67 339 220 22 77 chr17 9698806 9698897 -79805656 - MER5B DNA MER1_type -89 89 4 210 37 0 0 chr17 9699042 9699069 -79805484 + (A)n Simple_repeat Simple_repeat 1 27 0 2405 65 10 0 chr17 9699072 9699363 -79805190 + AluY SINE Alu 1 294 -17 1639 170 13 32 chr17 9699436 9699748 -79804805 - AluJb SINE Alu -4 308 3 651 137 0 73 chr17 9699769 9699893 -79804660 - FLAM_A SINE Alu -18 124 10 251 335 49 27 chr17 9701137 9701322 -79803231 + L2 LINE L2 1755 1943 -1371 182 200 0 0 chr17 9701526 9701561 -79802992 + L2 LINE L2 2607 2641 -673 195 39 0 0 chr17 9701626 9701634 -79802919 + (T)n Simple_repeat Simple_repeat 1 8 -18 2433 76 3 0 chr17 9701634 9701936 -79802617 + AluSp SINE Alu 1 303 -10 195 39 0 0 chr17 9701936 9701953 -79802600 + (T)n Simple_repeat Simple_repeat 7 26 0 264 252 0 107 chr17 9701965 9702068 -79802485 + MER58A DNA MER1_type 27 118 0 2269 157 8 17 chr17 9702109 9702282 -79802271 - L1MB5 LINE L1 -8 6166 5993 1860 131 138 60 chr17 9702282 9702629 -79801924 + MSTA LTR MaLR 1 384 -44 2386 93 0 7 chr17 9702629 9702930 -79801623 - AluSq SINE Alu -14 299 1 1860 131 138 60 chr17 9702930 9702979 -79801574 + MSTA LTR MaLR 384 428 0 2269 157 8 17 chr17 9702979 9703207 -79801346 - L1MB5 LINE L1 -181 5993 5769 467 259 36 0 chr17 9703215 9703327 -79801226 + MER58A DNA MER1_type 108 223 -1 488 306 55 12 chr17 9703384 9703639 -79800914 + L1MC4a LINE L1 5697 5962 -1846 2216 112 0 7 chr17 9703843 9704147 -79800406 - AluSg SINE Alu -8 302 1 2227 116 7 0 chr17 9706523 9706816 -79797737 + AluSg SINE Alu 1 295 -15 2898 211 51 27 chr17 9706821 9707452 -79797101 - MER82 DNA MER2_type -6 647 2 22 0 0 0 chr17 9707547 9707569 -79796984 + AT_rich Low_complexity Low_complexity 1 22 0 2453 236 51 36 chr17 9707603 9707906 -79796647 + L1ME1 LINE L1 5467 5764 -402 2368 75 0 3 chr17 9707906 9708212 -79796341 + AluY SINE Alu 2 306 -5 2453 236 51 36 chr17 9708212 9708463 -79796090 + L1ME1 LINE L1 5764 6035 -131 766 139 0 36 chr17 9708463 9708600 -79795953 + FLAM_A SINE Alu 1 132 -1 2453 236 51 36 chr17 9708600 9708713 -79795840 + L1ME1 LINE L1 6035 6145 -21 2297 94 10 0 chr17 9708714 9709002 -79795551 - AluSx SINE Alu -21 291 1 347 187 135 54 chr17 9709121 9709232 -79795321 - FLAM_A SINE Alu -15 118 1 21 82 0 0 chr17 9709263 9709312 -79795241 + AT_rich Low_complexity Low_complexity 1 49 0 213 377 0 0 chr17 9709566 9709643 -79794910 - L2 LINE L2 -11 3261 3185 21 36 0 0 chr17 9710227 9710255 -79794298 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr17 9710417 9710438 -79794115 + (GA)n Simple_repeat Simple_repeat 2 22 0 2290 76 3 23 chr17 9711430 9711732 -79792821 - AluSx SINE Alu -16 296 1 2538 82 0 0 chr17 9712114 9712419 -79792134 - AluSx SINE Alu -7 305 1 517 139 13 0 chr17 9712769 9712848 -79791705 - Tigger7 DNA MER2_type 0 2491 2412 1442 181 3 60 chr17 9712851 9713023 -79791530 - Tigger7 DNA MER2_type -284 266 115 2562 40 7 7 chr17 9713023 9713325 -79791228 + AluY SINE Alu 1 302 -9 1442 181 3 60 chr17 9713325 9713434 -79791119 - Tigger7 DNA MER2_type -435 115 1 1785 148 50 7 chr17 9713564 9713841 -79790712 + AluJo SINE Alu 5 293 -19 2349 82 0 19 chr17 9713844 9714159 -79790394 + AluSg SINE Alu 1 309 -1 955 278 65 45 chr17 9715606 9715767 -79788786 - MLT1L LTR MaLR -8 607 451 2144 187 49 28 chr17 9715767 9716260 -79788293 - MLT1D LTR MaLR -2 503 1 955 278 65 45 chr17 9716260 9716547 -79788006 - MLT1L LTR MaLR -164 451 150 2409 75 0 0 chr17 9716780 9717073 -79787480 - AluY SINE Alu -18 293 1 468 232 118 63 chr17 9717404 9717453 -79787100 - LTR50 LTR ERVL -1 794 749 2562 53 0 10 chr17 9717453 9717756 -79786797 - AluY SINE Alu -11 300 1 468 232 118 63 chr17 9717756 9718145 -79786408 - LTR50 LTR ERVL -46 749 213 2118 115 0 0 chr17 9718161 9718439 -79786114 - AluY SINE Alu -33 278 1 684 199 70 0 chr17 9718550 9718706 -79785847 - LTR50 LTR ERVL -628 167 1 2345 107 0 0 chr17 9719015 9719323 -79785230 + AluSq SINE Alu 1 308 -5 797 253 5 5 chr17 9719381 9719579 -79784974 + MIR SINE MIR 11 208 -54 3788 112 6 6 chr17 9720242 9720769 -79783784 - MER1A DNA MER1_type 0 527 1 2143 112 0 3 chr17 9721064 9721349 -79783204 + AluSx SINE Alu 1 284 -28 444 256 52 47 chr17 9721791 9721963 -79782590 + MIR SINE MIR 74 246 -16 1948 105 36 39 chr17 9722116 9722250 -79782303 + AluSx SINE Alu 1 134 -178 2442 77 3 3 chr17 9722250 9722549 -79782004 + AluSp SINE Alu 1 299 -14 1948 105 36 39 chr17 9722549 9722719 -79781834 + AluSx SINE Alu 134 304 -8 2329 101 0 0 chr17 9723347 9723645 -79780908 - AluSg SINE Alu -12 298 1 387 319 103 25 chr17 9724387 9724591 -79779962 - MIR SINE MIR -37 225 6 2279 84 0 10 chr17 9724598 9724895 -79779658 - AluSg SINE Alu -16 294 1 228 296 38 32 chr17 9725313 9725499 -79779054 + L2 LINE L2 2493 2679 -635 2005 132 0 33 chr17 9725516 9725820 -79778733 - AluSx SINE Alu -18 294 1 718 144 8 8 chr17 9727279 9727397 -79777156 - FLAM_C SINE Alu -11 122 5 203 263 28 117 chr17 9727534 9727713 -79776840 - L3 LINE CR1 -514 1063 901 2303 80 6 13 chr17 9728939 9729252 -79775301 - AluY SINE Alu 0 311 1 419 224 84 9 chr17 9729296 9729403 -79775150 + L2 LINE L2 3193 3307 -6 2516 74 0 0 chr17 9730780 9731079 -79773474 - AluSx SINE Alu -13 299 1 2368 97 0 0 chr17 9731464 9731762 -79772791 + AluSc SINE Alu 1 298 -11 234 0 0 0 chr17 9731924 9731950 -79772603 + (A)n Simple_repeat Simple_repeat 1 26 0 333 130 13 117 chr17 9733188 9733265 -79771288 + AluY SINE Alu 119 187 -114 3999 173 44 33 chr17 9733366 9733771 -79770782 - L1P LINE L1 -924 5222 4823 2116 119 13 7 chr17 9733771 9734073 -79770480 - AluSx SINE Alu -8 304 1 3999 173 44 33 chr17 9734073 9734176 -79770377 - L1P LINE L1 -1323 4823 4723 2182 128 0 0 chr17 9734176 9734481 -79770072 - AluSx SINE Alu -7 305 1 3999 173 44 33 chr17 9734481 9734880 -79769673 - L1P LINE L1 -1423 4723 4304 671 227 8 105 chr17 9735369 9735616 -79768937 - L2 LINE L2 -5 3308 3086 1739 152 3 44 chr17 9735634 9735930 -79768623 + AluJb SINE Alu 1 284 -28 228 167 71 0 chr17 9736074 9736116 -79768437 + MER5A DNA MER1_type 143 187 -2 369 58 0 0 chr17 9736212 9736264 -79768289 + (GA)n Simple_repeat Simple_repeat 1 52 0 2382 88 0 13 chr17 9736811 9737118 -79767435 - AluSx SINE Alu -9 303 1 232 314 107 25 chr17 9737232 9737353 -79767200 - MIR SINE MIR -78 184 54 1637 148 10 40 chr17 9737630 9737927 -79766626 - AluJo SINE Alu -8 304 17 389 295 74 0 chr17 9738106 9738255 -79766298 - L1ME LINE L1 -334 5787 5628 2170 114 0 0 chr17 9739037 9739317 -79765236 - AluSq SINE Alu -33 280 1 1950 182 88 29 chr17 9739495 9739972 -79764581 + MLT1D LTR MaLR 1 505 0 1295 188 62 90 chr17 9740042 9740575 -79763978 + L1MC5 LINE L1 7408 7925 -36 2201 132 0 7 chr17 9741049 9741359 -79763194 + AluSx SINE Alu 3 310 -2 2258 108 0 0 chr17 9741857 9742144 -79762409 - AluSg SINE Alu -23 287 1 287 244 24 0 chr17 9742183 9742265 -79762288 - MIR SINE MIR -149 113 30 2438 25 0 11 chr17 9743196 9743475 -79761078 + AluY SINE Alu 28 303 -8 1630 157 36 11 chr17 9743764 9744044 -79760509 - AluJo SINE Alu -15 297 11 334 288 86 22 chr17 9744284 9744423 -79760130 + MIR SINE MIR 7 154 -108 296 209 122 43 chr17 9744521 9744636 -79759917 + MIR SINE MIR 89 212 -50 2154 130 0 0 chr17 9745039 9745331 -79759222 - AluSq SINE Alu -21 292 1 1204 83 0 0 chr17 9745520 9745676 -79758877 - AluY SINE Alu 0 311 156 2352 84 0 7 chr17 9745886 9746182 -79758371 - AluSg SINE Alu -16 294 1 236 290 93 19 chr17 9746632 9746739 -79757814 + MIR3 SINE MIR 68 182 -26 335 270 225 19 chr17 9747450 9747717 -79756836 - L1MC4a LINE L1 -1963 5845 5524 2259 122 0 0 chr17 9747719 9748030 -79756523 + AluSx SINE Alu 1 311 -1 1787 156 29 13 chr17 9748037 9748344 -79756209 + AluSx SINE Alu 1 312 0 1443 167 15 0 chr17 9748549 9748812 -79755741 - AluSx SINE Alu -45 267 1 27 73 0 0 chr17 9748935 9748990 -79755563 + AT_rich Low_complexity Low_complexity 1 55 0 1157 196 9 9 chr17 9749017 9749236 -79755317 - MER20 DNA MER1_type 0 219 1 231 67 0 0 chr17 9749632 9749662 -79754891 + HSMAR1 DNA Mariner 1 30 -1257 1215 167 35 129 chr17 9749978 9750296 -79754257 - AluJo SINE Alu -16 296 9 22 35 0 0 chr17 9750306 9750335 -79754218 + AT_rich Low_complexity Low_complexity 1 29 0 43942 31 22 1 chr17 9750343 9756230 -79748323 + L1HS LINE L1 1 6017 -138 27 0 0 0 chr17 9756346 9756373 -79748180 + AT_rich Low_complexity Low_complexity 1 27 0 241 230 0 69 chr17 9756583 9756670 -79747883 - L1MC4a LINE L1 -1878 5930 5850 342 289 0 26 chr17 9757165 9757279 -79747274 + L1ME3A LINE L1 4398 4508 -1638 676 215 0 8 chr17 9757279 9757409 -79747144 - MER44D DNA MER2_type -1 704 576 554 111 127 63 chr17 9757407 9757533 -79747020 - MER44D DNA MER2_type -197 412 9 * 2452 229 83 30 chr17 9757567 9758587 -79745966 + L1ME3A LINE L1 4512 5581 -583 252 139 0 0 chr17 9758628 9758664 -79745889 + L1ME3A LINE L1 5677 5712 -458 2417 66 0 13 chr17 9758664 9758967 -79745586 - AluY SINE Alu -12 299 1 919 185 6 0 chr17 9758978 9759140 -79745413 - FAM SINE Alu -4 45 1 1396 242 106 9 chr17 9759144 9759569 -79744984 + L1ME3A LINE L1 5696 6161 -9 314 322 8 8 chr17 9759581 9759699 -79744854 + (CATATA)n Simple_repeat Simple_repeat 6 123 0 234 0 0 0 chr17 9759718 9759744 -79744809 + (TC)n Simple_repeat Simple_repeat 2 27 0 250 298 0 12 chr17 9760033 9760117 -79744436 + T-rich Low_complexity Low_complexity 1 83 0 2135 74 7 44 chr17 9760384 9760681 -79743872 + AluSg SINE Alu 1 286 -24 788 301 93 23 chr17 9760850 9761321 -79743232 - L1MC4a LINE L1 -1868 5940 5437 1707 134 0 0 chr17 9761541 9761788 -79742765 - AluJo SINE Alu -23 289 43 2684 17 0 0 chr17 9761788 9762077 -79742476 - AluYb8 SINE Alu -12 306 18 2037 106 32 0 chr17 9762105 9762389 -79742164 - AluSq SINE Alu -7 306 14 314 303 121 0 chr17 9762694 9762793 -79741760 - MIR SINE MIR -68 140 30 2545 69 3 0 chr17 9763346 9763651 -79740902 + AluY SINE Alu 1 306 -5 207 225 169 14 chr17 9763778 9763849 -79740704 - MER5B DNA MER1_type 0 178 97 2097 136 0 3 chr17 9763882 9764177 -79740376 + AluSx SINE Alu 1 294 -18 243 79 0 0 chr17 9764196 9764234 -79740319 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 2076 188 17 8 chr17 9764391 9764753 -79739800 + MLT1A1 LTR MaLR 1 365 0 955 235 167 48 chr17 9765042 9765502 -79739051 + Tigger8 DNA MER2_type 2 516 -150 183 205 0 0 chr17 9765575 9765614 -79738939 + (TA)n Simple_repeat Simple_repeat 2 40 0 1965 143 30 33 chr17 9765614 9765662 -79738891 - L1MA5 LINE L1 -3 6297 6250 2361 91 0 0 chr17 9765662 9765960 -79738593 - AluY SINE Alu -13 298 1 1965 143 30 33 chr17 9765960 9766274 -79738279 - L1MA5 LINE L1 -50 6250 5936 1904 138 3 7 chr17 9766392 9766675 -79737878 - AluSx SINE Alu -30 282 1 205 308 0 31 chr17 9766770 9766835 -79737718 - L2 LINE L2 0 3313 3251 2348 75 0 7 chr17 9766996 9767291 -79737262 - AluSq SINE Alu -20 293 1 1362 174 114 0 chr17 9767295 9767576 -79736977 - L1MA7 LINE L1 -241 6050 5738 1218 139 32 5 chr17 9767577 9767793 -79736760 + L1MA8 LINE L1 6070 6291 0 2158 101 0 0 chr17 9767796 9768073 -79736480 + AluSc SINE Alu 1 277 -32 551 135 10 0 chr17 9768073 9768169 -79736384 + GA-rich Low_complexity Low_complexity 2 98 0 2103 127 10 0 chr17 9768753 9769052 -79735501 + AluSq SINE Alu 1 302 -11 1259 196 4 21 chr17 9769347 9769587 -79734966 - MER46A DNA MER2_type 0 236 1 2241 114 7 0 chr17 9770006 9770312 -79734241 - AluSp SINE Alu -5 308 1 2089 144 0 3 chr17 9770514 9770812 -79733741 - AluSx SINE Alu -13 299 3 1482 64 0 11 chr17 9770825 9771040 -79733513 - AluYa5 SINE Alu 0 310 98 231 37 0 0 chr17 9771218 9771245 -79733308 - L1P LINE L1 -1513 4633 4607 3983 34 2 0 chr17 9771245 9771693 -79732860 + L1PA4 LINE L1 5704 6152 -3 6611 52 16 4 chr17 9772397 9773209 -79731344 - L1PA7 LINE L1 0 6154 5333 189 0 0 0 chr17 9773353 9773374 -79731179 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2428 81 0 3 chr17 9773470 9773780 -79730773 - AluY SINE Alu -2 309 1 5987 191 45 50 chr17 9773786 9773970 -79730583 + L1MC1 LINE L1 4509 4692 -1641 835 105 0 53 chr17 9773970 9774103 -79730450 + L1PA8 LINE L1 6030 6155 -17 5987 191 45 50 chr17 9774103 9774757 -79729796 + L1MC1 LINE L1 4692 5347 -986 1908 98 68 0 chr17 9774757 9775077 -79729476 + AluSx SINE Alu 1 338 0 5987 191 45 50 chr17 9775077 9775701 -79728852 + L1MC1 LINE L1 5347 5964 -369 2094 105 54 7 chr17 9775701 9775995 -79728558 + AluSc SINE Alu 1 308 -1 5987 191 45 50 chr17 9775995 9776363 -79728190 + L1MC1 LINE L1 5964 6332 -1 1567 178 21 7 chr17 9776373 9776654 -79727899 + AluJo SINE Alu 3 287 -25 180 0 0 0 chr17 9776655 9776675 -79727878 + (CA)n Simple_repeat Simple_repeat 2 21 0 668 294 65 0 chr17 9776716 9776917 -79727636 - MIR SINE MIR -31 231 18 1966 152 0 0 chr17 9777334 9777623 -79726930 + AluSx SINE Alu 1 289 -23 15722 199 31 35 chr17 9778107 9779985 -79724568 + L1MA5A LINE L1 77 1962 -4826 1990 151 0 7 chr17 9779985 9780290 -79724263 - AluSx SINE Alu -9 303 1 15722 199 31 35 chr17 9780290 9780628 -79723925 + L1MA5A LINE L1 1962 2300 -4488 2215 115 0 13 chr17 9780628 9780942 -79723611 + AluSg SINE Alu 1 310 0 15722 199 31 35 chr17 9780942 9784128 -79720425 + L1MA5A LINE L1 2300 5484 -1304 1566 167 72 0 chr17 9784128 9784391 -79720162 - AluSg SINE Alu -15 295 14 15722 199 31 35 chr17 9784391 9784881 -79719672 + L1MA5A LINE L1 5484 5975 -813 656 174 191 0 chr17 9784881 9784996 -79719557 + FLAM_A SINE Alu 1 137 -5 6264 122 23 9 chr17 9785011 9785979 -79718574 + L1MA5A LINE L1 5958 6938 -1 2317 100 3 3 chr17 9785984 9786294 -79718259 + AluSq SINE Alu 1 310 -3 219 69 0 0 chr17 9787172 9787201 -79717352 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 1832 158 0 3 chr17 9787201 9787485 -79717068 - AluJo SINE Alu -29 283 1 372 43 0 0 chr17 9787728 9787774 -79716779 + (CA)n Simple_repeat Simple_repeat 1 46 0 216 395 73 24 chr17 9788096 9788220 -79716333 - L2 LINE L2 -16 3256 3127 718 200 86 38 chr17 9788504 9788714 -79715839 + L2 LINE L2 3008 3227 -86 333 300 110 21 chr17 9788887 9789078 -79715475 - MIR3 SINE MIR -50 212 8 905 165 0 0 chr17 9789102 9789235 -79715318 + FLAM_C SINE Alu 1 133 0 271 274 115 61 chr17 9789557 9789948 -79714605 + L2 LINE L2 1750 2161 -1153 2469 66 0 7 chr17 9790017 9790322 -79714231 + AluSg SINE Alu 1 303 -7 507 317 76 79 chr17 9790581 9791567 -79712986 + L2 LINE L2 2229 3259 -13 267 387 20 20 chr17 9792584 9792788 -79711765 - L2 LINE L2 -624 2690 2487 207 69 0 0 chr17 9793009 9793038 -79711515 + (TCCA)n Simple_repeat Simple_repeat 3 31 0 342 240 125 10 chr17 9793046 9793150 -79711403 - L2 LINE L2 -23 3290 3175 1846 58 8 62 chr17 9793846 9794104 -79710449 + AluY SINE Alu 1 244 -67 1594 43 0 5 chr17 9794204 9794392 -79710161 + AluY SINE Alu 25 211 -100 706 97 0 39 chr17 9794392 9794495 -79710058 + L1MB5 LINE L1 6075 6173 -1 252 321 27 0 chr17 9794518 9794630 -79709923 + L1MC/D LINE L1 5797 5911 -1897 370 159 23 0 chr17 9794662 9794750 -79709803 + GA-rich Low_complexity Low_complexity 1 90 0 316 246 45 55 chr17 9795123 9795233 -79709320 + LTR67 LTR ERVL 443 551 -6 1126 289 66 23 chr17 9795308 9795786 -79708767 - L1ME LINE L1 -519 5645 5127 2180 128 0 0 chr17 9795786 9796082 -79708471 - AluSx SINE Alu -16 296 1 1126 289 66 23 chr17 9796082 9796293 -79708260 - L1ME LINE L1 -1037 5127 4927 21 0 0 0 chr17 9796564 9796585 -79707968 + AT_rich Low_complexity Low_complexity 1 21 0 289 335 45 28 chr17 9796607 9796962 -79707591 + L1M4 LINE L1 4390 4750 -1396 368 303 28 14 chr17 9796989 9797131 -79707422 - MER87 LTR ERV1 0 541 398 1051 163 33 23 chr17 9797556 9797754 -79706799 - L1MA9 LINE L1 -1 6311 6109 2279 96 3 10 chr17 9797754 9798067 -79706486 - AluSq SINE Alu -2 311 1 1051 163 33 23 chr17 9798067 9798083 -79706470 - L1MA9 LINE L1 -203 6109 6095 497 125 0 57 chr17 9798084 9798172 -79706381 + L1MB1 LINE L1 5806 5888 -301 439 231 231 8 chr17 9798309 9798439 -79706114 + MER5A DNA MER1_type 24 182 -7 2085 99 0 18 chr17 9798532 9798814 -79705739 + AluSg SINE Alu 1 277 -33 180 0 0 0 chr17 9798814 9798834 -79705719 + (CA)n Simple_repeat Simple_repeat 1 20 0 2317 89 3 10 chr17 9799426 9799740 -79704813 + AluSx SINE Alu 1 312 0 6089 122 14 2 chr17 9800009 9800963 -79703590 - L1PA13 LINE L1 0 6163 5195 488 214 10 10 chr17 9801060 9801163 -79703390 - MER5B DNA MER1_type -1 177 75 926 159 0 41 chr17 9801183 9801224 -79703329 - L1 LINE L1 -2018 4128 4087 2672 137 167 30 chr17 9801224 9801764 -79702789 + LTR18B LTR ERVL 1 614 0 926 159 0 41 chr17 9801764 9801892 -79702661 - L1 LINE L1 -2059 4087 3966 767 74 21 0 chr17 9801919 9802014 -79702539 - AluSp/q SINE Alu -15 298 202 1718 136 4 0 chr17 9802014 9802271 -79702282 + AluSx SINE Alu 50 307 -5 2422 96 3 0 chr17 9802595 9802907 -79701646 + AluSq SINE Alu 1 313 0 520 172 0 0 chr17 9803684 9803771 -79700782 - MER5B DNA MER1_type 0 178 92 250 325 35 9 chr17 9803984 9804098 -79700455 - MLT1K LTR MaLR -364 224 108 2335 98 3 3 chr17 9804175 9804482 -79700071 - AluSp SINE Alu -6 307 1 331 263 45 23 chr17 9804558 9804691 -79699862 - L1MC4a LINE L1 -1916 5892 5757 1893 138 7 7 chr17 9804741 9805032 -79699521 + AluJo SINE Alu 2 292 -20 2847 147 29 27 chr17 9805184 9805325 -79699228 - L1MB8 LINE L1 -15 6163 6024 2267 86 0 25 chr17 9805325 9805639 -79698914 + AluSq SINE Alu 1 306 -7 2847 147 29 27 chr17 9805639 9806013 -79698540 - L1MB8 LINE L1 -154 6024 5647 642 207 59 0 chr17 9806450 9806585 -79697968 + MER5A DNA MER1_type 7 149 -40 2282 114 0 0 chr17 9806594 9806900 -79697653 - AluSx SINE Alu -6 306 1 1647 123 0 0 chr17 9806904 9807140 -79697413 + AluSq SINE Alu 78 313 0 1728 110 8 0 chr17 9808038 9808274 -79696279 - AluSx SINE Alu -13 299 62 22 35 0 0 chr17 9808784 9808813 -79695740 + AT_rich Low_complexity Low_complexity 1 29 0 610 82 20 0 chr17 9809159 9809257 -79695296 + (TA)n Simple_repeat Simple_repeat 1 100 0 392 255 131 56 chr17 9809357 9809624 -79694929 - L1MC4a LINE L1 -375 5746 5460 2071 133 0 3 chr17 9809655 9809948 -79694605 - AluJb SINE Alu -14 298 7 1200 194 15 0 chr17 9810035 9810241 -79694312 - MER58A DNA MER1_type -15 209 1 2212 100 3 0 chr17 9810491 9810782 -79693771 + AluSx SINE Alu 1 292 -20 4058 131 63 44 chr17 9811218 9811511 -79693042 + MER49 LTR ERV1 1 287 -636 2056 109 41 10 chr17 9811511 9811805 -79692748 + AluSx SINE Alu 1 303 -9 4058 131 63 44 chr17 9811805 9812235 -79692318 + MER49 LTR ERV1 287 738 -185 202 74 0 0 chr17 9812235 9812262 -79692291 + (TTTA)n Simple_repeat Simple_repeat 2 100 0 2221 102 0 0 chr17 9812262 9812547 -79692006 - AluSx SINE Alu -1 311 1 321 233 189 0 chr17 9814957 9815047 -79689506 - MIR SINE MIR -57 151 45 2474 63 3 10 chr17 9815519 9815820 -79688733 + AluSp SINE Alu 1 299 -14 21 36 0 0 chr17 9815973 9816001 -79688552 + AT_rich Low_complexity Low_complexity 1 28 0 301 230 81 54 chr17 9816001 9816055 -79688498 - L1ME4a LINE L1 -249 5872 5821 2184 115 3 16 chr17 9816055 9816367 -79688186 - AluSx SINE Alu -4 308 1 301 230 81 54 chr17 9816367 9816460 -79688093 - L1ME4a LINE L1 -300 5821 5721 384 192 0 64 chr17 9816623 9816675 -79687878 - L1ME4a LINE L1 -483 5638 5591 4123 93 9 52 chr17 9816675 9817312 -79687241 - MER4B LTR ERV1 0 610 1 384 192 0 64 chr17 9817312 9817337 -79687216 - L1ME4a LINE L1 -530 5591 5566 181 315 54 45 chr17 9817348 9817459 -79687094 - MIR SINE MIR -55 153 42 2279 94 0 0 chr17 9817648 9817925 -79686628 + AluSg SINE Alu 1 277 -33 182 62 31 0 chr17 9817927 9817959 -79686594 + (CAAAA)n Simple_repeat Simple_repeat 1 33 0 286 209 48 38 chr17 9818315 9818420 -79686133 - L1MC5 LINE L1 -58 7903 7798 2330 88 3 7 chr17 9818423 9818717 -79685836 - AluSx SINE Alu -14 298 6 901 102 0 8 chr17 9818736 9818864 -79685689 - AluSg/x SINE Alu -10 302 176 568 206 23 39 chr17 9818959 9819124 -79685429 + MER5B DNA MER1_type 15 189 0 200 176 0 68 chr17 9819808 9819956 -79684597 + (TA)n Simple_repeat Simple_repeat 2 139 0 2259 101 7 3 chr17 9820381 9820689 -79683864 - AluSg SINE Alu -1 309 1 565 251 222 21 chr17 9820907 9821186 -79683367 + L2 LINE L2 2941 3275 -38 750 247 80 13 chr17 9821216 9821455 -79683098 + MIR SINE MIR 2 256 -6 2449 65 3 0 chr17 9821556 9821848 -79682705 + AluY SINE Alu 1 293 -18 294 194 118 91 chr17 9822228 9822369 -79682184 - MER58 DNA MER1_type 0 2420 2284 2171 125 3 0 chr17 9822369 9822664 -79681889 + AluSx SINE Alu 1 296 -16 294 194 118 91 chr17 9822664 9822717 -79681836 - MER58 DNA MER1_type -136 2284 28 451 277 91 29 chr17 9822778 9823052 -79681501 - L1MC4a LINE L1 -1237 6571 6281 * 4751 114 16 57 chr17 9823043 9823547 -79681006 - L1PA13 LINE L1 -2 6161 5701 2369 96 0 0 chr17 9823547 9823850 -79680703 - AluSq SINE Alu -10 303 1 4751 114 16 57 chr17 9823850 9824150 -79680403 - L1PA13 LINE L1 -462 5701 5390 212 229 33 33 chr17 9825938 9825999 -79678554 - MER5A DNA MER1_type -84 105 45 277 279 54 9 chr17 9826313 9826424 -79678129 - L3 LINE CR1 -1119 458 343 4755 112 48 36 chr17 9826879 9827649 -79676904 + MER4E LTR ERV1 1 779 0 810 118 0 8 chr17 9827765 9827884 -79676669 + FLAM_C SINE Alu 1 118 -15 23 0 0 0 chr17 9828042 9828065 -79676488 + AT_rich Low_complexity Low_complexity 1 23 0 16011 140 25 24 chr17 9828244 9830350 -79674203 + Tigger2 DNA MER2_type 28 2129 -589 2208 93 3 7 chr17 9830350 9830639 -79673914 + AluSc SINE Alu 3 290 -19 16011 140 25 24 chr17 9830639 9831157 -79673396 + Tigger2 DNA MER2_type 2129 2659 -59 2394 82 0 3 chr17 9831157 9831462 -79673091 + AluSg SINE Alu 1 304 -6 16011 140 25 24 chr17 9831462 9831523 -79673030 + Tigger2 DNA MER2_type 2659 2718 0 690 217 123 77 chr17 9831535 9831991 -79672562 - HAL1 LINE L1 -167 2340 1864 702 220 52 36 chr17 9832232 9832449 -79672104 - LTR41 LTR ERVL -553 242 1 21 57 0 0 chr17 9832648 9832683 -79671870 + AT_rich Low_complexity Low_complexity 1 35 0 2334 89 0 3 chr17 9832683 9832975 -79671578 + AluSp SINE Alu 1 291 -22 249 33 0 0 chr17 9832979 9833009 -79671544 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 278 281 68 52 chr17 9833497 9833714 -79670839 + MIR SINE MIR 3 224 -38 2430 82 0 7 chr17 9834401 9834706 -79669847 + AluSx SINE Alu 1 303 -9 2478 69 7 0 chr17 9834708 9835014 -79669539 + AluY SINE Alu 1 308 -3 1847 183 0 0 chr17 9835684 9835995 -79668558 - AluSq SINE Alu 0 313 3 2412 102 0 0 chr17 9837570 9837883 -79666670 - AluSq SINE Alu 0 313 1 1546 181 72 3 chr17 9838195 9838488 -79666065 + MER39 LTR ERV1 1 313 -394 459 172 21 0 chr17 9838488 9838581 -79665972 + FLAM_C SINE Alu 49 143 0 358 218 13 13 chr17 9838581 9838659 -79665894 + GA-rich Low_complexity Low_complexity 1 78 0 732 120 14 21 chr17 9838661 9838803 -79665750 + (GGAA)n Simple_repeat Simple_repeat 3 143 0 1122 157 6 0 chr17 9838804 9838976 -79665577 + AluJb SINE Alu 129 301 -11 1615 130 8 15 chr17 9838976 9839238 -79665315 + MER39 LTR ERV1 307 566 -141 672 92 49 37 chr17 9839239 9839403 -79665150 + CT-rich Low_complexity Low_complexity 4 169 0 213 57 0 94 chr17 9839414 9839467 -79665086 + (TTCTCC)n Simple_repeat Simple_repeat 4 51 0 2430 82 10 0 chr17 9839468 9839773 -79664780 - AluSp SINE Alu -5 308 1 835 200 7 7 chr17 9839774 9839929 -79664624 + MER39 LTR ERV1 553 707 0 440 275 87 115 chr17 9840083 9840229 -79664324 - LTR67 LTR ERVL 0 557 408 2031 145 30 0 chr17 9840229 9840526 -79664027 + AluJb SINE Alu 1 306 -6 440 275 87 115 chr17 9840526 9840918 -79663635 - LTR67 LTR ERVL -149 408 34 870 225 6 11 chr17 9841021 9841199 -79663354 - MER45A DNA AcHobo 0 178 2 974 148 0 7 chr17 9841381 9841530 -79663023 - Tigger5 DNA MER2_type 0 2323 2176 2566 40 0 0 chr17 9841630 9841926 -79662627 + AluY SINE Alu 16 311 0 386 286 41 7 chr17 9841944 9842091 -79662462 - L1ME4a LINE L1 -259 5862 5711 883 254 152 55 chr17 9842099 9842481 -79662072 - LTR41 LTR ERVL -9 764 346 1470 186 0 58 chr17 9842654 9842816 -79661737 - AluJo SINE Alu -19 293 156 2379 77 0 10 chr17 9842816 9843116 -79661437 - AluY SINE Alu -14 297 1 1470 186 0 58 chr17 9843116 9843264 -79661289 - AluJo SINE Alu -156 156 1 392 183 0 0 chr17 9843264 9843335 -79661218 - LTR41 LTR ERVL -702 71 1 255 309 21 0 chr17 9843342 9843439 -79661114 - L1ME4a LINE L1 -410 5711 5613 21 36 0 0 chr17 9843592 9843620 -79660933 + AT_rich Low_complexity Low_complexity 1 28 0 220 338 146 20 chr17 9844935 9845149 -79659404 - MIR3 SINE MIR -12 250 12 2118 106 21 3 chr17 9845269 9845553 -79659000 + AluSg SINE Alu 5 293 -17 2229 110 0 3 chr17 9845942 9846243 -79658310 + AluSg SINE Alu 1 300 -10 371 189 0 0 chr17 9846539 9846613 -79657940 + MER5B DNA MER1_type 2 75 -103 200 176 0 39 chr17 9846613 9846664 -79657889 + T-rich Low_complexity Low_complexity 2 50 0 1922 187 19 83 chr17 9846689 9846753 -79657800 - MLT1D LTR MaLR 0 505 438 2259 98 0 0 chr17 9846753 9847038 -79657515 + AluSx SINE Alu 1 285 -27 234 0 9 0 chr17 9847038 9847108 -79657445 + (CA)n Simple_repeat Simple_repeat 2 27 0 249 33 0 0 chr17 9847107 9847137 -79657416 + (TC)n Simple_repeat Simple_repeat 2 31 0 1922 187 19 83 chr17 9847108 9847586 -79656967 - MLT1D LTR MaLR -65 440 1 2368 92 3 0 chr17 9847590 9847885 -79656668 - AluSq SINE Alu -17 296 1 450 210 0 10 chr17 9847902 9848002 -79656551 + MER5B DNA MER1_type 80 178 0 1585 170 0 28 chr17 9849078 9849360 -79655193 - AluJb SINE Alu -37 275 2 875 219 136 24 chr17 9849547 9849798 -79654755 - L1MC4 LINE L1 -1037 7005 6727 530 234 226 13 chr17 9849810 9850045 -79654508 - HAL1 LINE L1 -1018 1489 1205 2310 108 0 0 chr17 9850046 9850334 -79654219 + AluSx SINE Alu 3 290 -22 254 313 67 13 chr17 9850377 9850527 -79654026 - L1M4 LINE L1 -1880 4266 4109 352 293 14 33 chr17 9850614 9850829 -79653724 - L1M4 LINE L1 -2248 3898 3688 2399 41 41 0 chr17 9851262 9851552 -79653001 - AluY SINE Alu -9 302 1 201 179 60 45 chr17 9852223 9852290 -79652263 + L3 LINE CR1 1296 1363 -214 506 63 13 0 chr17 9853285 9853364 -79651189 + (TA)n Simple_repeat Simple_repeat 2 81 0 2091 117 38 0 chr17 9853374 9853665 -79650888 + AluSx SINE Alu 1 302 -10 232 115 0 135 chr17 9854173 9854192 -79650361 - Alu SINE Alu -157 151 131 2508 67 0 0 chr17 9854192 9854490 -79650063 - AluY SINE Alu -13 298 1 232 115 0 135 chr17 9854490 9854522 -79650031 - Alu SINE Alu -177 131 107 2537 82 0 0 chr17 9855179 9855482 -79649071 - AluSx SINE Alu -9 303 1 2093 124 10 26 chr17 9856095 9856402 -79648151 - AluSx SINE Alu -10 302 1 2414 91 0 7 chr17 9856653 9856962 -79647591 - AluSg SINE Alu -3 307 1 27 0 0 0 chr17 9856964 9856991 -79647562 + AT_rich Low_complexity Low_complexity 1 27 0 2138 123 3 0 chr17 9857027 9857342 -79647211 - AluSg SINE Alu 0 310 1 2284 78 0 0 chr17 9857567 9857849 -79646704 - AluY SINE Alu -3 308 27 357 292 167 16 chr17 9858017 9858209 -79646344 - HAL1 LINE L1 -586 1921 1701 256 293 171 29 chr17 9858554 9858694 -79645859 - MIR3 SINE MIR -28 180 21 2258 90 0 3 chr17 9859038 9859326 -79645227 + AluSx SINE Alu 1 287 -25 2349 86 0 10 chr17 9859908 9860209 -79644344 - AluY SINE Alu -13 298 1 211 219 0 0 chr17 9860907 9860948 -79643605 - MER5B DNA MER1_type -137 41 1 2087 100 7 42 chr17 9861317 9861627 -79642926 + AluSx SINE Alu 3 301 -11 390 270 158 13 chr17 9862029 9862181 -79642372 + MER5A DNA MER1_type 10 183 -6 2361 60 7 0 chr17 9862206 9862522 -79642031 - AluY SINE Alu 0 318 1 2216 121 3 13 chr17 9862526 9862841 -79641712 - AluSx SINE Alu 0 312 1 233 315 47 24 chr17 9862907 9863034 -79641519 - MER5B DNA MER1_type -48 130 1 233 260 301 7 chr17 9863086 9863232 -79641321 - MIR SINE MIR -24 238 50 387 293 45 57 chr17 9866870 9867027 -79637526 - L2 LINE L2 -1 3271 3117 383 260 130 21 chr17 9867513 9867705 -79636848 - MLT1J2 LTR MaLR -234 216 4 2283 83 7 20 chr17 9867870 9868170 -79636383 + AluSq SINE Alu 1 296 -17 427 310 114 41 chr17 9868429 9868719 -79635834 - MLT1L LTR MaLR -5 610 300 1184 283 85 37 chr17 9868788 9869189 -79635364 - L1MC4a LINE L1 -1750 6058 5621 2695 50 0 0 chr17 9869189 9869492 -79635061 + AluY SINE Alu 5 307 -4 1184 283 85 37 chr17 9869492 9869652 -79634901 - L1MC4a LINE L1 -2187 5621 5470 296 299 130 54 chr17 9869739 9870119 -79634434 - L1MC4a LINE L1 -1071 5075 4644 2296 90 3 3 chr17 9870119 9870408 -79634145 - AluSc SINE Alu -20 289 1 296 299 130 54 chr17 9870408 9870542 -79634011 - L1MC4a LINE L1 -1502 4644 4522 279 0 0 0 chr17 9870550 9870581 -79633972 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 276 279 72 53 chr17 9870916 9871124 -79633429 - MLT1L LTR MaLR -398 217 6 2296 244 89 64 chr17 9871592 9871756 -79632797 + L1MC4a LINE L1 4993 5151 -995 2589 43 0 10 chr17 9871756 9872058 -79632495 + AluY SINE Alu 1 299 -12 2296 244 89 64 chr17 9872058 9872771 -79631782 + L1MC4a LINE L1 5151 5098 -1048 2333 78 0 3 chr17 9872771 9873118 -79631435 - AluSq SINE Alu 0 346 1 2296 244 89 64 chr17 9873118 9873429 -79631124 + L1MC4a LINE L1 5097 5399 -747 873 152 49 0 chr17 9873463 9873627 -79630926 + L1P LINE L1 3726 3897 -2249 304 247 0 0 chr17 9874082 9874159 -79630394 - L1PB4 LINE L1 -2 6154 6078 2241 120 0 0 chr17 9874198 9874498 -79630055 + AluSg SINE Alu 1 300 -10 2141 129 0 3 chr17 9874734 9875036 -79629517 - AluSg SINE Alu -9 301 1 854 119 0 0 chr17 9875518 9875636 -79628917 - AluSq/x SINE Alu -195 118 1 208 230 11 103 chr17 9875944 9876031 -79628522 + L2 LINE L2 3186 3264 -8 2395 77 0 7 chr17 9876302 9876602 -79627951 - AluSc SINE Alu -11 298 1 26 0 0 0 chr17 9876873 9876899 -79627654 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr17 9876938 9876982 -79627571 + AT_rich Low_complexity Low_complexity 1 44 0 2352 89 3 7 chr17 9877231 9877534 -79627019 + AluSx SINE Alu 1 302 -10 714 203 0 0 chr17 9877624 9877747 -79626806 + FLAM_C SINE Alu 2 124 -9 2010 222 13 57 chr17 9877804 9878167 -79626386 - L1ME1 LINE L1 -5 6230 5902 2376 91 3 10 chr17 9878167 9878474 -79626079 - AluSq SINE Alu -8 305 1 2010 222 13 57 chr17 9878474 9878710 -79625843 - L1ME1 LINE L1 -333 5902 5657 1842 162 74 16 chr17 9878721 9879098 -79625455 - L1MA8 LINE L1 -5 6286 5888 1277 132 55 9 chr17 9879087 9879306 -79625247 - L1MA8 LINE L1 -633 5658 5430 * 2355 81 14 0 chr17 9879308 9879603 -79624950 - AluY SINE Alu -12 299 1 2110 98 44 0 chr17 9879605 9879880 -79624673 - AluSx SINE Alu -19 293 7 1427 232 124 25 chr17 9879880 9880271 -79624282 - L1ME1 LINE L1 -1307 4908 4452 2322 82 7 10 chr17 9880271 9880574 -79623979 - AluY SINE Alu -9 302 1 1427 232 124 25 chr17 9880574 9880699 -79623854 - L1ME1 LINE L1 -1763 4452 4341 1410 206 61 43 chr17 9880709 9881102 -79623451 - L1ME1 LINE L1 -5968 428 29 2263 91 7 3 chr17 9881597 9881895 -79622658 + AluSc SINE Alu 1 299 -10 2025 87 4 0 chr17 9882574 9882826 -79621727 - AluSx SINE Alu -59 253 1 603 216 102 41 chr17 9882826 9883249 -79621304 - HAL1b LINE L1 -318 1030 531 2403 100 0 0 chr17 9883249 9883550 -79621003 - AluSx SINE Alu -11 301 1 603 216 102 41 chr17 9883550 9883657 -79620896 - HAL1b LINE L1 -817 531 432 515 222 7 42 chr17 9884413 9884557 -79619996 - MER5A DNA MER1_type -25 164 26 499 150 0 70 chr17 9884764 9884864 -79619689 + AluJo SINE Alu 69 161 -151 1220 185 15 102 chr17 9884887 9885212 -79619341 + AluJo SINE Alu 1 297 -15 4713 76 136 57 chr17 9885634 9886400 -79618153 - LTR12 LTR ERV1 0 826 1 492 314 52 16 chr17 9886559 9886750 -79617803 + MIR SINE MIR 8 205 -57 216 208 0 0 chr17 9886750 9886791 -79617762 + (TA)n Simple_repeat Simple_repeat 2 45 -9 361 82 262 0 chr17 9886791 9886852 -79617701 + MADE1 DNA Mariner 4 80 0 216 208 0 0 chr17 9886852 9886863 -79617690 + (TA)n Simple_repeat Simple_repeat 44 54 0 23 33 0 0 chr17 9887308 9887338 -79617215 + AT_rich Low_complexity Low_complexity 1 30 0 2420 92 3 3 chr17 9887427 9887731 -79616822 - AluSx SINE Alu -8 304 1 535 99 0 0 chr17 9888132 9888203 -79616350 + AluS SINE Alu 2 72 -241 540 200 17 8 chr17 9888305 9888425 -79616128 - MIR SINE MIR -90 172 52 2385 94 0 0 chr17 9888803 9889100 -79615453 - AluSg SINE Alu -13 297 1 369 288 114 8 chr17 9889220 9889352 -79615201 + MIR SINE MIR 3 148 -114 3640 139 70 23 chr17 9891155 9891312 -79613241 + MER39 LTR ERV1 1 149 -558 2340 93 7 3 chr17 9891312 9891614 -79612939 - AluSg SINE Alu -7 303 1 3640 139 70 23 chr17 9891614 9892067 -79612486 + MER39 LTR ERV1 149 640 -67 1377 135 64 8 chr17 9892061 9892391 -79612162 - MER39 LTR ERV1 -295 412 2 * 403 273 88 67 chr17 9892393 9892734 -79611819 - LTR33 LTR ERVL -127 394 47 2206 89 7 0 chr17 9892896 9893212 -79611341 - AluSg SINE Alu 0 319 2 1881 128 0 51 chr17 9893273 9893589 -79610964 - AluSx SINE Alu 0 301 1 1485 176 66 4 chr17 9893741 9894014 -79610539 - Tigger3(Golem) DNA MER2_type -10 3019 2730 2369 105 0 0 chr17 9894014 9894318 -79610235 + AluSg SINE Alu 1 304 -6 301 262 0 0 chr17 9894352 9894413 -79610140 - Tigger3(Golem) DNA MER2_type -2956 73 13 1644 148 48 90 chr17 9894448 9894666 -79609887 - MER47A DNA MER2_type -1958 365 168 2350 74 3 0 chr17 9894666 9894951 -79609602 + AluSg SINE Alu 1 286 -24 1644 148 48 90 chr17 9894951 9895109 -79609444 - MER47A DNA MER2_type -2155 168 5 186 43 0 0 chr17 9895109 9895132 -79609421 + (TA)n Simple_repeat Simple_repeat 2 24 0 479 291 67 22 chr17 9895246 9895403 -79609150 - L1MC/D LINE L1 -2211 5597 5430 453 152 13 0 chr17 9895403 9895482 -79609071 - MER116 DNA Mariner 0 80 1 479 291 67 22 chr17 9895482 9895503 -79609050 - L1MC/D LINE L1 -2378 5430 5411 2116 68 62 52 chr17 9895520 9895829 -79608724 - AluSp SINE Alu -1 312 1 436 265 74 55 chr17 9895834 9896339 -79608214 - L1MC/D LINE L1 -750 5396 4900 192 77 0 0 chr17 9896579 9896605 -79607948 + (CA)n Simple_repeat Simple_repeat 2 27 0 2401 72 3 0 chr17 9896752 9897042 -79607511 - AluSc SINE Alu -15 294 4 870 218 16 73 chr17 9897060 9897308 -79607245 - L1ME1 LINE L1 0 6166 5933 427 303 99 68 chr17 9897647 9898268 -79606285 + L1M4 LINE L1 3144 3744 -2402 2273 65 10 39 chr17 9898268 9898604 -79605949 + AluY SINE Alu 1 311 0 427 303 99 68 chr17 9898604 9898925 -79605628 + L1M4 LINE L1 3744 4054 -2092 2450 84 7 0 chr17 9898925 9899234 -79605319 + AluY SINE Alu 1 311 0 427 303 99 68 chr17 9899234 9899562 -79604991 + L1M4 LINE L1 4054 4472 -1674 2472 84 3 0 chr17 9899696 9900007 -79604546 - AluSp SINE Alu -1 312 1 2485 67 3 3 chr17 9900317 9900617 -79603936 + AluY SINE Alu 3 302 -9 2286 99 0 0 chr17 9901204 9901527 -79603026 - AluSq SINE Alu 0 323 1 1218 170 4 39 chr17 9902242 9902471 -79602082 - AluJo SINE Alu -91 221 1 189 205 26 0 chr17 9902471 9902510 -79602043 - L2 LINE L2 -12 3260 3221 246 62 0 0 chr17 9902783 9902815 -79601738 + (T)n Simple_repeat Simple_repeat 1 32 0 266 340 21 21 chr17 9902914 9903055 -79601498 - MIR SINE MIR 0 262 122 333 221 26 0 chr17 9903138 9903215 -79601338 - MIR SINE MIR -128 134 56 1390 136 47 101 chr17 9903541 9903858 -79600695 - AluSq SINE Alu -13 300 1 2423 66 0 0 chr17 9903860 9904148 -79600405 - AluY SINE Alu -23 288 1 1195 82 0 7 chr17 9904148 9904294 -79600259 - AluSq/x SINE Alu -167 145 1 2044 108 7 4 chr17 9904315 9904594 -79599959 - AluSg SINE Alu -30 280 1 194 327 159 9 chr17 9904646 9904759 -79599794 - L2 LINE L2 -10 3262 3133 1675 164 39 96 chr17 9904953 9905361 -79599192 - MLT1B LTR MaLR -3 387 3 2420 63 0 13 chr17 9905992 9906291 -79598262 + AluY SINE Alu 1 295 -16 406 324 54 14 chr17 9906697 9906919 -79597634 + MIR SINE MIR 32 262 0 1768 150 34 7 chr17 9908596 9908889 -79595664 - AluJb SINE Alu -11 301 1 3385 280 78 58 chr17 9909780 9910254 -79594299 - HAL1 LINE L1 -11 2496 2033 1764 71 0 18 chr17 9910254 9910480 -79594073 - AluY SINE Alu -7 304 83 3385 280 78 58 chr17 9910480 9911350 -79593203 - HAL1 LINE L1 -474 2033 1182 2433 43 0 3 chr17 9911350 9911677 -79592876 - AluY SINE Alu 0 326 1 3385 280 78 58 chr17 9911677 9911897 -79592656 - HAL1 LINE L1 -1325 1182 968 219 103 0 0 chr17 9911897 9911936 -79592617 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3385 280 78 58 chr17 9911936 9912009 -79592544 - HAL1 LINE L1 -1539 968 898 2191 112 7 0 chr17 9912009 9912304 -79592249 + AluSc SINE Alu 1 297 -12 3385 280 78 58 chr17 9912304 9912797 -79591756 - HAL1 LINE L1 -1609 898 317 297 188 40 114 chr17 9912822 9912971 -79591582 - HAL1 LINE L1 -2276 231 94 344 321 49 6 chr17 9913074 9913236 -79591317 - MIR SINE MIR -87 175 7 300 283 0 28 chr17 9914751 9914857 -79589696 + MER5A DNA MER1_type 36 138 -51 285 270 10 40 chr17 9914932 9915032 -79589521 - MER5A DNA MER1_type -25 164 68 2325 104 3 0 chr17 9916488 9916786 -79587767 - AluSg SINE Alu -1 309 11 2194 99 0 7 chr17 9917623 9917927 -79586626 + AluY SINE Alu 1 302 0 2316 100 0 0 chr17 9918124 9918405 -79586148 - AluSx SINE Alu -31 281 1 518 371 62 6 chr17 9918599 9918952 -79585601 + L2 LINE L2 2333 2705 -609 247 269 45 0 chr17 9919189 9919256 -79585297 + MIR SINE MIR 100 169 -93 479 335 65 52 chr17 9919291 9919488 -79585065 - L1M4 LINE L1 -1555 4591 4398 2058 127 24 0 chr17 9919488 9919779 -79584774 - AluSq SINE Alu -15 298 1 479 335 65 52 chr17 9919779 9919812 -79584741 - L1M4 LINE L1 -1748 4398 4367 1685 167 52 14 chr17 9919812 9920100 -79584453 - AluJb SINE Alu -9 303 5 479 335 65 52 chr17 9920100 9920268 -79584285 - L1M4 LINE L1 -1779 4367 4187 306 320 22 108 chr17 9920572 9920670 -79583883 + MIR SINE MIR 48 153 -109 2110 78 27 96 chr17 9920670 9921002 -79583551 + AluSq SINE Alu 1 309 -4 306 320 22 108 chr17 9921002 9921134 -79583419 + MIR SINE MIR 153 258 -4 593 323 149 28 chr17 9921353 9921585 -79582968 + L2 LINE L2 2251 2454 -859 2355 95 3 7 chr17 9921585 9921891 -79582662 - AluSp SINE Alu -8 305 1 593 323 149 28 chr17 9921891 9922570 -79581983 + L2 LINE L2 2454 3282 -31 1088 168 0 6 chr17 9922945 9923118 -79581435 + FAM SINE Alu 1 172 -3 2427 93 0 6 chr17 9923121 9923432 -79581121 + AluSg SINE Alu 1 309 -1 2383 114 0 0 chr17 9924161 9924469 -79580084 - AluSg SINE Alu -2 308 1 262 254 127 0 chr17 9924469 9924540 -79580013 - MIR SINE MIR -111 151 72 2571 84 3 0 chr17 9925006 9925316 -79579237 + AluSx SINE Alu 1 311 -1 2288 71 0 40 chr17 9925340 9925674 -79578879 - AluY SINE Alu 0 322 1 210 221 81 47 chr17 9926755 9926841 -79577712 - MIR SINE MIR -17 245 157 228 282 176 0 chr17 9928207 9928280 -79576273 - MER5A DNA MER1_type -14 175 116 2514 85 0 0 chr17 9928280 9928587 -79575966 - AluSc SINE Alu -2 307 1 2203 125 3 0 chr17 9928590 9928885 -79575668 - AluSx SINE Alu -16 296 1 228 282 176 0 chr17 9928885 9928949 -79575604 - MER5A DNA MER1_type -74 115 9 210 118 0 0 chr17 9929368 9929402 -79575151 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 339 179 0 0 chr17 9929404 9929460 -79575093 - L2 LINE L2 -9 3304 3249 2330 67 3 35 chr17 9929503 9929815 -79574738 + AluY SINE Alu 1 302 -9 2684 47 0 0 chr17 9930850 9931151 -79573402 - AluY SINE Alu -10 301 1 2389 98 0 7 chr17 9932042 9932348 -79572205 - AluSq SINE Alu -7 306 3 241 363 166 14 chr17 9932706 9932929 -79571624 - MIR SINE MIR -2 260 4 476 202 31 175 chr17 9934148 9934371 -79570182 + L2 LINE L2 3118 3308 -5 2028 154 0 16 chr17 9934913 9935225 -79569328 - AluJo SINE Alu -5 307 1 1168 238 94 49 chr17 9935419 9935452 -79569101 - MLT1G1 LTR MaLR -2 588 558 1841 180 0 0 chr17 9935452 9935747 -79568806 + AluJo SINE Alu 1 295 -17 1168 238 94 49 chr17 9935747 9936261 -79568292 - MLT1G1 LTR MaLR -32 558 9 769 244 76 2 chr17 9936269 9936544 -79568009 + L1MC4a LINE L1 5587 5819 -302 2313 64 4 11 chr17 9936576 9936856 -79567697 - AluSp SINE Alu -29 284 7 376 123 0 0 chr17 9936867 9936924 -79567629 - Alu SINE Alu -3 299 243 2307 96 23 0 chr17 9937184 9937486 -79567067 + AluSc SINE Alu 1 309 0 2366 80 0 0 chr17 9939399 9939715 -79564838 - AluSx SINE Alu 0 316 1 1294 168 0 10 chr17 9939723 9939932 -79564621 - AluJo SINE Alu -19 293 87 820 145 0 48 chr17 9939974 9940119 -79564434 - FLAM_C SINE Alu -3 140 3 216 214 0 0 chr17 9940121 9940163 -79564390 + (TTA)n Simple_repeat Simple_repeat 2 43 0 397 333 86 14 chr17 9940768 9940990 -79563563 - MIR SINE MIR -23 239 2 2269 118 0 3 chr17 9942045 9942351 -79562202 - AluSx SINE Alu -7 305 1 620 265 38 19 chr17 9943427 9943638 -79560915 + L1MC5 LINE L1 7710 7924 -37 414 359 82 5 chr17 9943832 9944027 -79560526 + MIR SINE MIR 44 253 -9 2311 95 0 0 chr17 9944466 9944812 -79559741 - AluSx SINE Alu 0 346 1 310 293 136 68 chr17 9945238 9945361 -79559192 - L2 LINE L2 -38 3234 3121 2335 83 24 0 chr17 9945361 9945649 -79558904 + AluSq SINE Alu 1 295 -18 310 293 136 68 chr17 9945649 9945819 -79558734 - L2 LINE L2 -151 3121 2921 339 351 106 0 chr17 9945909 9946060 -79558493 - L2 LINE L2 -494 2820 2654 213 121 0 0 chr17 9946739 9946772 -79557781 + (CA)n Simple_repeat Simple_repeat 1 33 0 333 0 0 0 chr17 9946812 9946849 -79557704 + (CA)n Simple_repeat Simple_repeat 1 37 0 388 268 24 65 chr17 9946860 9947028 -79557525 + L1MEd LINE L1 46 206 -5913 641 261 103 0 chr17 9947054 9947249 -79557304 - MER58C DNA MER1_type 0 215 1 2393 83 0 37 chr17 9947415 9947599 -79556954 - AluSq SINE Alu 0 313 145 2579 54 0 0 chr17 9947599 9947894 -79556659 - AluY SINE Alu -16 295 1 2393 83 0 37 chr17 9947894 9948034 -79556519 - AluSq SINE Alu -168 145 1 1121 78 0 0 chr17 9948046 9948175 -79556378 - AluSq/x SINE Alu -184 129 1 574 296 0 18 chr17 9948271 9948440 -79556113 + Charlie4 DNA MER1_type 12 177 -1784 189 250 0 0 chr17 9948628 9948664 -79555889 + MIR SINE MIR 219 254 -8 2380 93 0 10 chr17 9949623 9949934 -79554619 + AluSx SINE Alu 1 308 -4 261 268 188 22 chr17 9950349 9950487 -79554066 - MARNA DNA Mariner -149 437 277 551 294 130 4 chr17 9951033 9951264 -79553289 - MLT1I LTR MaLR -149 260 1 358 322 46 7 chr17 9951264 9951416 -79553137 + MIR SINE MIR 70 227 -35 2016 95 4 0 chr17 9951439 9951691 -79552862 + AluSp SINE Alu 45 297 -16 323 243 14 0 chr17 9952493 9952563 -79551990 + MIR SINE MIR 50 120 -88 1820 85 0 4 chr17 9953420 9953655 -79550898 + AluSg/x SINE Alu 72 305 -7 411 264 193 35 chr17 9958185 9958382 -79546171 + MIR SINE MIR 23 250 -12 24 32 0 0 chr17 9959847 9959878 -79544675 + GC_rich Low_complexity Low_complexity 1 31 0 25 65 0 0 chr17 9959923 9959969 -79544584 + GC_rich Low_complexity Low_complexity 1 46 0 207 0 0 0 chr17 9960055 9960078 -79544475 + (CCCG)n Simple_repeat Simple_repeat 4 26 0 618 209 78 7 chr17 9961104 9961257 -79543296 - MER5A DNA MER1_type -6 183 20 437 141 26 0 chr17 9961335 9961413 -79543140 + MER103 DNA DNA 8 87 -79 1736 118 54 98 chr17 9962543 9962951 -79541602 + MLT1B LTR MaLR 1 390 0 1696 208 3 55 chr17 9963905 9964054 -79540499 + MLT1A1 LTR MaLR 7 162 -203 1597 101 187 30 chr17 9964054 9964321 -79540232 + AluSg1 SINE Alu 1 309 0 1696 208 3 55 chr17 9964321 9964550 -79540003 + MLT1A1 LTR MaLR 162 365 0 2513 78 0 6 chr17 9964792 9965107 -79539446 + AluSq SINE Alu 1 306 -7 262 241 9 111 chr17 9969059 9969167 -79535386 + MIR3 SINE MIR 89 185 -23 224 337 92 0 chr17 9970583 9970681 -79533872 + MIR SINE MIR 86 192 -70 476 261 0 0 chr17 9970872 9971052 -79533501 + (CA)n Simple_repeat Simple_repeat 1 180 0 384 211 0 0 chr17 9971094 9971236 -79533317 + (CA)n Simple_repeat Simple_repeat 1 142 0 399 300 70 70 chr17 9971664 9972061 -79532492 + L2 LINE L2 2866 3262 -10 283 211 31 31 chr17 9972106 9972234 -79532319 + (TG)n Simple_repeat Simple_repeat 2 129 0 301 149 28 50 chr17 9972248 9972429 -79532124 + (TG)n Simple_repeat Simple_repeat 1 177 0 431 106 21 50 chr17 9972455 9972596 -79531957 + (TG)n Simple_repeat Simple_repeat 1 137 0 323 138 38 46 chr17 9972627 9972898 -79531655 + (TG)n Simple_repeat Simple_repeat 1 268 0 318 219 12 24 chr17 9973725 9973807 -79530746 - MIR3 SINE MIR -54 154 74 1869 107 27 4 chr17 9974781 9975043 -79529510 - AluSg SINE Alu -9 301 34 182 259 37 0 chr17 9975464 9975518 -79529035 + MIR SINE MIR 65 120 -88 2126 119 0 16 chr17 9976484 9976787 -79527766 - AluSx SINE Alu -14 298 1 257 297 0 0 chr17 9977566 9977630 -79526923 - MIR SINE MIR -112 150 87 287 343 28 0 chr17 9978456 9978564 -79525989 - MIR3 SINE MIR -49 159 49 449 308 38 19 chr17 9979743 9979932 -79524621 - MIR SINE MIR -40 222 32 315 204 187 12 chr17 9981728 9981855 -79522698 - MIR SINE MIR -62 146 16 502 231 17 8 chr17 9981870 9981987 -79522566 - MER5B DNA MER1_type -58 120 3 198 0 0 0 chr17 9982180 9982202 -79522351 + (T)n Simple_repeat Simple_repeat 1 22 0 2125 112 0 16 chr17 9982993 9983296 -79521257 - AluSg SINE Alu -12 298 1 484 250 2 51 chr17 9983493 9983671 -79520882 - MER58B DNA MER1_type 0 341 169 340 323 80 73 chr17 9983703 9983802 -79520751 + HAL1 LINE L1 1114 1211 -1296 1344 170 76 55 chr17 9983802 9984091 -79520462 + AluJo SINE Alu 1 295 -17 340 323 80 73 chr17 9984091 9984279 -79520274 + HAL1 LINE L1 1211 1403 -1104 614 293 22 31 chr17 9984280 9984614 -79519939 + HAL1b LINE L1 427 706 -642 402 21 0 0 chr17 9984759 9984806 -79519747 + (TG)n Simple_repeat Simple_repeat 2 48 0 688 316 105 69 chr17 9984809 9985225 -79519328 + L1ME LINE L1 1856 2255 -3960 2315 79 0 0 chr17 9985225 9985516 -79519037 - AluY SINE Alu -20 291 1 688 316 105 69 chr17 9985516 9986362 -79518191 + L1ME LINE L1 2255 3829 -2386 233 247 13 0 chr17 9986367 9986444 -79518109 + MER116 DNA Mariner 1 78 -2 264 271 105 30 chr17 9988109 9988343 -79516210 + L1ME LINE L1 5290 5541 -649 312 336 15 37 chr17 9988354 9988488 -79516065 + L1ME LINE L1 5589 5719 -471 241 335 159 6 chr17 9988779 9988961 -79515592 - L2 LINE L2 -339 2975 2766 2206 106 3 0 chr17 9989121 9989423 -79515130 - AluSx SINE Alu 0 312 10 339 169 0 0 chr17 9989589 9989660 -79514893 + (TG)n Simple_repeat Simple_repeat 1 71 0 552 323 74 2 chr17 9989708 9990032 -79514521 - L2 LINE L2 -225 3088 2740 2170 100 0 0 chr17 9991805 9992105 -79512448 - AluSg SINE Alu 0 300 1 415 293 28 29 chr17 9992432 9992631 -79511922 + MIR SINE MIR 16 216 -46 270 327 63 25 chr17 9992655 9992814 -79511739 + MARNA DNA Mariner 189 353 -233 393 248 261 13 chr17 9992817 9992970 -79511583 + L2 LINE L2 3119 3309 -4 1700 184 17 0 chr17 9994418 9994711 -79509842 - AluJo SINE Alu -14 298 1 229 111 0 0 chr17 9995198 9995234 -79509319 - MER117 DNA MER1_type -49 148 113 1906 138 17 3 chr17 9995474 9995770 -79508783 + AluSq SINE Alu 13 312 -1 320 133 17 0 chr17 9995773 9995833 -79508720 + GA-rich Low_complexity Low_complexity 2 62 0 393 22 0 0 chr17 9995834 9995880 -79508673 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 253 275 161 55 chr17 9995987 9996205 -79508348 - L3 LINE CR1 -214 1363 1123 2199 111 0 13 chr17 9996224 9996540 -79508013 - AluSx SINE Alu 0 312 1 2381 80 0 0 chr17 9996836 9997147 -79507406 + AluY SINE Alu 1 311 0 1944 116 0 88 chr17 9997796 9998000 -79506553 - AluSg SINE Alu -10 300 134 243 0 0 0 chr17 9998000 9998027 -79506526 + (TG)n Simple_repeat Simple_repeat 2 28 0 1944 116 0 88 chr17 9998027 9998151 -79506402 - AluSg SINE Alu -176 134 1 241 389 37 12 chr17 9999209 9999371 -79505182 + L2 LINE L2 3107 3272 0 1045 272 75 24 chr17 10000265 10000615 -79503938 + MLT1J2 LTR MaLR 14 390 -60 2337 103 3 0 chr17 10000615 10000927 -79503626 + AluSq SINE Alu 1 313 0 1045 272 75 24 chr17 10000927 10000992 -79503561 + MLT1J2 LTR MaLR 390 450 0 1268 244 81 56 chr17 10001554 10002000 -79502553 + LTR16A1 LTR ERVL 1 457 0 2167 121 0 3 chr17 10002367 10002680 -79501873 - AluSx SINE Alu 0 312 1 499 291 11 30 chr17 10002744 10002929 -79501624 + MIR3 SINE MIR 6 187 -21 905 189 20 31 chr17 10002963 10003159 -79501394 + MER63A DNA MER1_type 1 194 -16 202 382 36 6 chr17 10003497 10003662 -79500891 + L3 LINE CR1 1277 1446 -131 232 304 89 37 chr17 10004007 10004142 -79500411 - MIR3 SINE MIR -24 184 43 339 288 7 43 chr17 10004928 10005067 -79499486 + GA-rich Low_complexity Low_complexity 3 136 0 419 219 0 24 chr17 10005123 10005205 -79499348 - MER116 DNA Mariner 0 80 1 777 224 130 0 chr17 10005357 10005549 -79499004 + MER20 DNA MER1_type 1 217 -2 2249 102 0 0 chr17 10005810 10006103 -79498450 - AluSx SINE Alu -19 293 1 2294 89 7 0 chr17 10006112 10006416 -79498137 - AluSp SINE Alu -7 306 1 366 304 127 19 chr17 10006490 10006750 -79497803 + L1MC5 LINE L1 7616 7903 -58 2509 64 3 0 chr17 10006947 10007258 -79497295 - AluSx SINE Alu 0 312 1 786 213 197 0 chr17 10007399 10007582 -79496971 - MER20 DNA MER1_type 0 219 1 722 295 73 7 chr17 10007734 10008036 -79496517 - L1ME LINE L1 -325 5796 5475 443 82 0 0 chr17 10008068 10008129 -79496424 - AluJo SINE Alu -16 296 236 892 158 0 58 chr17 10008129 10008300 -79496253 - AluJo SINE Alu -140 172 12 369 329 76 29 chr17 10008369 10008587 -79495966 - L1ME LINE L1 -759 5387 5181 2261 79 3 0 chr17 10008587 10008878 -79495675 - AluSp SINE Alu -21 292 1 369 329 76 29 chr17 10008878 10009192 -79495361 - L1ME LINE L1 -965 5181 4883 2149 115 0 0 chr17 10009192 10009487 -79495066 - AluSx SINE Alu -17 295 1 369 329 76 29 chr17 10009487 10010047 -79494506 - L1ME LINE L1 -1263 4883 4243 2212 108 0 0 chr17 10010407 10010704 -79493849 + AluSg SINE Alu 1 297 -13 723 227 77 73 chr17 10010720 10010967 -79493586 + MIR SINE MIR 6 253 -9 1954 185 44 31 chr17 10011573 10011611 -79492942 - L1MB5 LINE L1 -1 6173 6137 2175 120 3 0 chr17 10011611 10011910 -79492643 - AluSq SINE Alu -13 300 1 1954 185 44 31 chr17 10011910 10012211 -79492342 - L1MB5 LINE L1 -37 6137 5824 1696 158 0 60 chr17 10012211 10012527 -79492026 - AluJb SINE Alu -15 297 1 1954 185 44 31 chr17 10012527 10012641 -79491912 - L1MB5 LINE L1 -350 5824 5713 415 234 90 0 chr17 10012980 10013091 -79491462 - MIR SINE MIR -54 208 88 606 273 52 5 chr17 10013755 10013949 -79490604 - MER63A DNA MER1_type 0 210 8 236 271 187 32 chr17 10014070 10014225 -79490328 - MIR3 SINE MIR -20 188 10 1519 255 46 26 chr17 10016229 10016688 -79487865 - Charlie4a DNA MER1_type -11 497 30 1712 154 0 20 chr17 10017773 10018066 -79486487 + AluJo SINE Alu 1 287 -25 26 0 0 0 chr17 10018067 10018093 -79486460 + AT_rich Low_complexity Low_complexity 1 26 0 1964 123 0 0 chr17 10019718 10019994 -79484559 + AluSx SINE Alu 1 276 -36 287 355 47 6 chr17 10020828 10021000 -79483553 - MIR3 SINE MIR 0 208 30 2278 86 3 7 chr17 10021842 10022144 -79482409 - AluSq SINE Alu -12 301 1 271 283 166 28 chr17 10023224 10023369 -79481184 + MLT1J LTR MaLR 343 507 -4 269 301 0 0 chr17 10023768 10023871 -79480682 + (CA)n Simple_repeat Simple_repeat 2 104 0 205 371 9 9 chr17 10024411 10024527 -79480026 + MIR3 SINE MIR 86 201 -7 2032 170 20 59 chr17 10025245 10025651 -79478902 + MLT1B LTR MaLR 1 390 0 1008 76 0 0 chr17 10027126 10027257 -79477296 - AluSp/q SINE Alu -9 304 174 532 87 0 0 chr17 10027257 10027326 -79477227 - AluS SINE Alu -243 70 2 569 254 66 0 chr17 10027326 10027555 -79476998 - L1MC/D LINE L1 -758 5388 5199 2058 58 65 0 chr17 10027566 10027841 -79476712 - AluY SINE Alu -18 293 1 2211 102 3 0 chr17 10027869 10028173 -79476380 + AluSp SINE Alu 1 305 -8 353 336 108 9 chr17 10028265 10028589 -79475964 + L2 LINE L2 2859 3214 -99 291 28 0 0 chr17 10029159 10029195 -79475358 + (TG)n Simple_repeat Simple_repeat 2 37 0 434 281 105 7 chr17 10029744 10029897 -79474656 - MIR SINE MIR -1 261 94 2427 78 0 0 chr17 10030168 10030474 -79474079 - AluSx SINE Alu -6 306 1 368 264 47 0 chr17 10030811 10030917 -79473636 - MIR3 SINE MIR -6 202 92 2346 77 3 0 chr17 10031509 10031806 -79472747 - AluSp SINE Alu -15 298 1 25 0 0 0 chr17 10031809 10031834 -79472719 + AT_rich Low_complexity Low_complexity 1 25 0 991 171 11 23 chr17 10031994 10032170 -79472383 + MER5B DNA MER1_type 3 176 -2 2310 96 0 0 chr17 10033415 10033716 -79470837 + AluSx SINE Alu 1 301 -11 552 15 0 0 chr17 10033842 10033907 -79470646 + (TGG)n Simple_repeat Simple_repeat 2 66 0 637 140 13 140 chr17 10035487 10035591 -79468962 + MER45A DNA AcHobo 42 121 -1460 1920 108 0 37 chr17 10035591 10035886 -79468667 - AluSx SINE Alu 0 312 29 637 140 13 140 chr17 10035886 10035938 -79468615 + MER45A DNA AcHobo 121 178 0 399 41 0 0 chr17 10036530 10036579 -79467974 + (TG)n Simple_repeat Simple_repeat 2 50 0 342 0 0 0 chr17 10036871 10036909 -79467644 + (TG)n Simple_repeat Simple_repeat 2 39 0 1624 180 61 44 chr17 10037451 10037812 -79466741 + MLT1B LTR MaLR 19 385 -5 2143 111 0 3 chr17 10038252 10038559 -79465994 - AluSg SINE Alu -4 306 1 308 308 63 43 chr17 10038597 10038849 -79465704 + L2 LINE L2 2764 3034 -238 1689 157 0 17 chr17 10039077 10039386 -79465167 - AluJb SINE Alu 0 304 1 326 290 145 54 chr17 10039414 10039635 -79464918 - L1ME4a LINE L1 -55 6066 5826 1877 146 26 3 chr17 10039652 10039954 -79464599 + AluSx SINE Alu 1 309 -3 688 254 12 129 chr17 10040040 10040219 -79464334 - L1ME4a LINE L1 -369 5752 5554 2130 85 0 4 chr17 10040219 10040537 -79464016 - AluSg SINE Alu 0 317 1 688 254 12 129 chr17 10040537 10040869 -79463684 - L1ME4a LINE L1 -567 5554 5296 259 276 0 87 chr17 10041336 10041463 -79463090 - MIR SINE MIR -63 145 30 211 396 50 22 chr17 10042693 10042832 -79461721 - L2 LINE L2 -9 3263 3121 791 159 0 6 chr17 10042979 10043155 -79461398 + (TGGA)n Simple_repeat Simple_repeat 3 177 0 266 284 0 0 chr17 10043155 10043222 -79461331 + (TAGG)n Simple_repeat Simple_repeat 2 68 0 1137 178 53 0 chr17 10044093 10044301 -79460252 + MER20 DNA MER1_type 1 219 0 2334 71 10 3 chr17 10044417 10044727 -79459826 + AluSp SINE Alu 2 313 0 418 269 0 37 chr17 10045710 10045818 -79458735 - L2 LINE L2 -7 3265 3162 1758 108 0 8 chr17 10046594 10046843 -79457710 - AluSx SINE Alu -16 296 50 1572 113 0 9 chr17 10046843 10047070 -79457483 - AluSc SINE Alu -82 227 1 482 294 43 16 chr17 10047137 10047324 -79457229 + MIR3 SINE MIR 15 206 -2 690 120 0 0 chr17 10047795 10047895 -79456658 - LTR12 LTR ERV1 0 714 615 325 261 11 0 chr17 10047897 10047989 -79456564 - LTR30 LTR ERV1 -79 643 551 288 182 91 15 chr17 10048000 10048066 -79456487 - LTR12 LTR ERV1 -439 275 205 1112 127 127 10 chr17 10048109 10048314 -79456239 - LTR12 LTR ERV1 -484 230 2 2051 135 0 3 chr17 10049825 10050137 -79454416 - AluSq SINE Alu -2 311 1 913 119 8 0 chr17 10050137 10050271 -79454282 - AluSq/x SINE Alu -177 135 1 448 128 116 0 chr17 10051436 10051522 -79453031 + MER53 DNA DNA 1 96 -93 314 305 156 32 chr17 10052308 10052462 -79452091 + L3 LINE CR1 1394 1566 -11 1924 57 4 38 chr17 10052534 10052796 -79451757 - AluY SINE Alu -21 290 38 2288 85 3 3 chr17 10054117 10054422 -79450131 - AluSx SINE Alu -7 305 1 383 255 56 43 chr17 10055530 10055691 -79448862 + MIR SINE MIR 2 164 -98 2227 101 3 0 chr17 10055861 10056158 -79448395 + AluSq SINE Alu 1 298 -15 325 278 16 16 chr17 10056980 10057106 -79447447 + L2 LINE L2 2996 3121 -192 435 218 47 59 chr17 10057243 10057413 -79447140 + L2 LINE L2 3146 3313 0 757 300 131 67 chr17 10057433 10057741 -79446812 + L2 LINE L2 1290 1577 -1737 2155 111 0 46 chr17 10057741 10057917 -79446636 - AluSx SINE Alu -3 309 153 1597 52 61 5 chr17 10057917 10058130 -79446423 - AluSg/x SINE Alu -17 293 69 2155 111 0 46 chr17 10058130 10058277 -79446276 - AluSx SINE Alu -159 153 1 757 300 131 67 chr17 10058277 10059199 -79445354 + L2 LINE L2 1577 2598 -716 285 368 15 40 chr17 10059199 10059400 -79445153 - L1MEd LINE L1 -5582 537 342 386 261 124 0 chr17 10059943 10060104 -79444449 - MER112 DNA MER1_type -12 248 68 619 141 27 13 chr17 10060107 10060256 -79444297 + (TGGA)n Simple_repeat Simple_repeat 3 153 0 192 398 11 0 chr17 10060381 10060474 -79444079 + L2 LINE L2 3204 3297 -16 2336 83 0 3 chr17 10062245 10062546 -79442007 - AluSx SINE Alu -12 300 1 246 275 29 0 chr17 10062621 10062690 -79441863 - L2 LINE L2 0 3272 3202 500 332 61 43 chr17 10062704 10063032 -79441521 - L2 LINE L2 -4 3268 2935 2334 95 0 9 chr17 10063450 10063765 -79440788 - AluSx SINE Alu 0 312 1 197 281 0 31 chr17 10064203 10064267 -79440286 - MIR SINE MIR -124 84 23 512 245 82 27 chr17 10065434 10065581 -79438972 - MER5B DNA MER1_type -3 175 21 2254 96 3 3 chr17 10065854 10066157 -79438396 + AluSg SINE Alu 1 303 -7 2053 97 10 48 chr17 10066157 10066468 -79438085 + AluSc SINE Alu 1 299 -10 2056 125 3 0 chr17 10067165 10067462 -79437091 - AluSp SINE Alu -15 298 1 195 284 112 89 chr17 10067487 10067934 -79436619 - L2 LINE L2 -8 3264 2771 1340 119 4 44 chr17 10068029 10068256 -79436297 + AluY SINE Alu 87 304 -7 1321 148 0 5 chr17 10068264 10068473 -79436080 + AluSg/x SINE Alu 92 299 -13 216 0 0 0 chr17 10068598 10068622 -79435931 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 982 278 78 38 chr17 10068623 10069023 -79435530 - L2 LINE L2 -14 3299 2884 2343 48 7 7 chr17 10069484 10069779 -79434774 + AluY SINE Alu 1 295 -16 318 337 116 32 chr17 10069814 10070004 -79434549 + L3 LINE CR1 1037 1242 -335 1172 106 0 0 chr17 10070058 10070219 -79434334 + AluSq SINE Alu 152 312 -1 355 312 100 48 chr17 10070230 10070461 -79434092 + L3 LINE CR1 1333 1575 -2 231 36 0 0 chr17 10070478 10070506 -79434047 + (CCTG)n Simple_repeat Simple_repeat 3 30 0 231 152 0 0 chr17 10070508 10070554 -79433999 + CT-rich Low_complexity Low_complexity 4 49 0 2483 213 77 25 chr17 10070605 10071014 -79433539 - L1ME2 LINE L1 -117 6116 5730 1782 112 44 20 chr17 10071014 10071309 -79433244 + AluSx SINE Alu 1 302 -10 2483 213 77 25 chr17 10071309 10071755 -79432798 - L1ME2 LINE L1 -503 5730 5214 240 378 150 0 chr17 10071814 10071941 -79432612 + L3 LINE CR1 1038 1183 -394 2052 218 48 155 chr17 10071941 10072256 -79432297 - L1ME2 LINE L1 -992 5223 4876 225 0 0 0 chr17 10072256 10072281 -79432272 + (CA)n Simple_repeat Simple_repeat 2 26 0 2052 218 48 155 chr17 10072281 10072400 -79432153 - L1ME2 LINE L1 -1339 4876 4746 2150 71 3 11 chr17 10072400 10072719 -79431834 - AluY SINE Alu 0 317 1 2052 218 48 155 chr17 10072719 10073721 -79430832 - L1ME2 LINE L1 -1469 4746 3939 577 254 46 0 chr17 10073721 10073827 -79430726 - L1ME2 LINE L1 -3089 3126 3026 1637 191 32 61 chr17 10073827 10074203 -79430350 - MLT1A1 LTR MaLR 0 365 1 577 254 46 0 chr17 10074203 10074293 -79430260 - L1ME2 LINE L1 -3189 3026 2921 399 196 21 21 chr17 10074321 10074418 -79430135 - L1ME2 LINE L1 -3732 2483 2387 347 250 61 86 chr17 10074434 10074491 -79430062 - L1ME2 LINE L1 -4037 2359 2302 1283 7 7 13 chr17 10074491 10074644 -79429909 + L1PA6 LINE L1 6003 6154 0 347 250 61 86 chr17 10074644 10074866 -79429687 - L1ME2 LINE L1 -4094 2302 2087 246 32 0 0 chr17 10074877 10074908 -79429645 + (TG)n Simple_repeat Simple_repeat 2 32 0 198 0 0 0 chr17 10075076 10075098 -79429455 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2087 86 0 0 chr17 10075107 10075376 -79429177 - AluSg SINE Alu -31 279 11 189 352 0 0 chr17 10075415 10075469 -79429084 - L2 LINE L2 -31 3241 3188 247 274 162 17 chr17 10075595 10075712 -79428841 + L2 LINE L2 2925 3058 -214 1115 162 56 20 chr17 10075846 10076043 -79428510 - Tigger3(Golem) DNA MER2_type -1 3028 2825 734 208 11 71 chr17 10076384 10076449 -79428104 - MIR SINE MIR 0 262 195 2249 92 0 0 chr17 10076449 10076744 -79427809 - AluSq SINE Alu -18 295 1 734 208 11 71 chr17 10076744 10076861 -79427692 - MIR SINE MIR -67 195 91 2284 100 0 0 chr17 10077651 10077962 -79426591 - AluSq SINE Alu -1 312 2 1001 279 118 0 chr17 10078138 10078536 -79426017 + LTR16A LTR ERVL 1 445 -5 195 42 0 0 chr17 10078914 10078938 -79425615 + (CA)n Simple_repeat Simple_repeat 1 24 0 2336 71 0 23 chr17 10080277 10080586 -79423967 - AluY SINE Alu -9 302 1 722 82 20 0 chr17 10080586 10080684 -79423869 - AluSg/x SINE Alu -8 302 203 2306 74 7 3 chr17 10080705 10081004 -79423549 - AluSg SINE Alu -10 300 1 2268 173 44 22 chr17 10081007 10081456 -79423097 + MER68 LTR ERV1 34 492 -70 473 255 0 0 chr17 10081456 10081550 -79423003 + MER82 DNA MER2_type 1 94 -559 366 338 32 6 chr17 10081588 10081745 -79422808 - MIR SINE MIR -73 189 29 690 287 12 0 chr17 10081770 10081937 -79422616 + MER82 DNA MER2_type 447 615 -38 470 154 0 26 chr17 10081923 10082001 -79422552 + MER68 LTR ERV1 480 555 -7 * 1964 86 93 7 chr17 10082591 10082871 -79421682 - AluSq SINE Alu -9 304 1 1967 142 15 9 chr17 10082946 10083284 -79421269 + MER2 DNA MER2_type 2 341 -3 1002 200 45 155 chr17 10083288 10083668 -79420885 + MER21B LTR ERV1 15 352 -511 642 234 78 73 chr17 10083717 10083922 -79420631 + MER21B LTR ERV1 364 569 -294 1132 89 0 0 chr17 10083926 10084072 -79420481 - AluSg/x SINE Alu -13 299 154 647 240 58 23 chr17 10084072 10084243 -79420310 - MER21B LTR ERV1 -126 737 561 2177 101 0 3 chr17 10084243 10084549 -79420004 + AluSg SINE Alu 1 305 -5 2116 108 0 0 chr17 10085451 10085747 -79418806 + AluSg SINE Alu 1 296 -14 529 319 37 61 chr17 10085802 10085871 -79418682 + HAL1 LINE L1 811 880 -1627 1893 140 45 72 chr17 10085871 10085994 -79418559 - MLT1B LTR MaLR 0 390 265 2332 100 0 0 chr17 10085994 10086305 -79418248 - AluSx SINE Alu -1 311 1 1893 140 45 72 chr17 10086305 10086400 -79418153 - MLT1B LTR MaLR -125 265 169 1724 168 0 39 chr17 10086400 10086710 -79417843 - AluJb SINE Alu -14 298 1 1893 140 45 72 chr17 10086710 10086891 -79417662 - MLT1B LTR MaLR -221 169 1 529 319 37 61 chr17 10086891 10087147 -79417406 + HAL1 LINE L1 880 1128 -1379 356 302 86 40 chr17 10087452 10087674 -79416879 - L1MEd LINE L1 -5779 340 109 2266 87 0 0 chr17 10087689 10087987 -79416566 - AluSx SINE Alu -14 298 1 463 311 64 43 chr17 10088398 10088678 -79415875 + L2 LINE L2 3027 3312 -1 421 165 59 24 chr17 10088769 10088803 -79415750 + (TA)n Simple_repeat Simple_repeat 2 33 -144 1955 100 0 0 chr17 10088803 10089063 -79415490 + AluSx SINE Alu 1 260 -52 421 165 59 24 chr17 10089063 10089198 -79415355 + (TA)n Simple_repeat Simple_repeat 33 177 0 519 332 47 64 chr17 10089373 10089840 -79414713 + L2 LINE L2 2813 3271 -1 2085 92 3 3 chr17 10090426 10090735 -79413818 - AluY SINE Alu 0 309 1 2264 146 6 0 chr17 10091203 10091538 -79413015 + MER1B DNA MER1_type 1 337 0 905 190 0 0 chr17 10091578 10091736 -79412817 + FAM SINE Alu 1 158 -17 225 214 12 71 chr17 10091759 10091843 -79412710 + MER113 DNA MER1_type? 1 79 -442 2123 102 0 0 chr17 10092199 10092494 -79412059 + AluSp SINE Alu 16 310 -3 1773 214 70 37 chr17 10092608 10093094 -79411459 - MLT1D LTR MaLR -2 503 2 387 298 171 10 chr17 10093699 10093904 -79410649 - L2 LINE L2 0 3313 3076 2045 111 0 36 chr17 10094086 10094392 -79410161 + AluSx SINE Alu 1 295 -17 685 236 0 0 chr17 10094560 10094687 -79409866 + FLAM_A SINE Alu 1 127 -15 215 325 95 8 chr17 10094689 10094815 -79409738 - L2 LINE L2 -594 2720 2584 2173 102 3 0 chr17 10145426 10145720 -79358833 - AluSq SINE Alu -18 295 1 487 171 0 34 chr17 10146306 10146481 -79358072 + G-rich Low_complexity Low_complexity 1 169 0 432 300 38 33 chr17 10146662 10146872 -79357681 - MLT1K LTR MaLR -121 467 257 320 263 118 33 chr17 10146916 10147068 -79357485 - MLT1K LTR MaLR -411 177 13 278 326 50 35 chr17 10147158 10147299 -79357254 - MIR SINE MIR -65 197 55 802 306 60 16 chr17 10147723 10148106 -79356447 + LTR16C LTR ERVL 90 489 -2 1771 87 76 11 chr17 10148963 10149255 -79355298 + AluSg SINE Alu 1 309 0 2043 102 16 13 chr17 10149416 10149719 -79354834 + AluSx SINE Alu 1 304 -8 2263 86 7 0 chr17 10150402 10150705 -79353848 + AluSx SINE Alu 1 305 -7 1263 100 0 0 chr17 10150710 10150880 -79353673 + AluSg/x SINE Alu 121 290 -20 183 245 82 0 chr17 10151669 10151718 -79352835 + MIR SINE MIR 32 84 -124 214 300 20 0 chr17 10151730 10151780 -79352773 + MIR SINE MIR 3 53 -209 1964 87 20 17 chr17 10151933 10152231 -79352322 + AluSg SINE Alu 1 299 -11 678 258 146 0 chr17 10152374 10152587 -79351966 + MIR SINE MIR 19 262 0 188 176 27 162 chr17 10152607 10152644 -79351909 + MIR3 SINE MIR 124 148 -60 365 263 26 105 chr17 10152644 10152834 -79351719 + MER5B DNA MER1_type 1 175 -3 188 176 27 162 chr17 10152834 10152870 -79351683 + MIR3 SINE MIR 148 187 -21 3054 170 40 16 chr17 10152971 10153553 -79351000 - L1MB5 LINE L1 -6 6168 5573 566 165 19 10 chr17 10154587 10154690 -79349863 + MIR SINE MIR 1 104 -158 2011 115 0 7 chr17 10155068 10155375 -79349178 - AluSx SINE Alu 0 305 1 847 271 24 5 chr17 10155855 10156065 -79348488 - MIR SINE MIR -21 241 28 223 299 47 9 chr17 10156102 10156209 -79348344 + L3 LINE CR1 1143 1253 -324 333 306 69 28 chr17 10156496 10156640 -79347913 - L1ME3 LINE L1 -22 6140 5991 2083 73 62 3 chr17 10157053 10157342 -79347211 - AluSc SINE Alu -3 306 1 216 0 0 0 chr17 10157902 10157926 -79346627 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 1732 149 0 11 chr17 10157926 10158207 -79346346 - AluJo SINE Alu -34 278 1 1272 38 0 6 chr17 10158219 10158377 -79346176 - AluY SINE Alu -4 307 151 1645 113 4 4 chr17 10159186 10159424 -79345129 - AluSq SINE Alu -41 272 35 912 155 16 36 chr17 10159500 10159693 -79344860 + MER53 DNA DNA 1 189 0 2218 105 3 0 chr17 10160212 10160516 -79344037 - AluSq SINE Alu -8 305 1 260 297 55 0 chr17 10160676 10160767 -79343786 + L1ME4a LINE L1 5596 5691 -430 243 252 0 54 chr17 10160906 10161017 -79343536 + L1ME4a LINE L1 5946 6050 -71 2044 114 7 0 chr17 10161161 10161468 -79343085 + AluY SINE Alu 1 309 -2 726 173 47 0 chr17 10161590 10161717 -79342836 - FLAM_C SINE Alu 0 133 1 291 253 114 0 chr17 10161992 10162071 -79342482 - L1P LINE L1 -1979 4167 4080 621 178 48 7 chr17 10162394 10162540 -79342013 + AluSg/x SINE Alu 70 221 -91 515 204 0 0 chr17 10163161 10163249 -79341304 + L2 LINE L2 3225 3312 -1 2193 113 37 53 chr17 10164661 10164701 -79339852 - THE1C LTR MaLR -1 374 335 2007 127 23 0 chr17 10164701 10165000 -79339553 + AluSx SINE Alu 1 306 -6 2193 113 37 53 chr17 10165000 10165339 -79339214 - THE1C LTR MaLR -40 335 1 304 299 21 21 chr17 10165884 10165981 -79338572 - MIR SINE MIR -147 115 19 234 231 39 13 chr17 10166049 10166127 -79338426 + L1ME4a LINE L1 5969 6048 -73 719 247 88 24 chr17 10166147 10166521 -79338032 - MLT1K LTR MaLR -4 584 149 262 225 132 70 chr17 10166813 10166942 -79337611 - MIR SINE MIR -105 157 21 397 197 0 0 chr17 10167210 10167276 -79337277 - MIR SINE MIR -149 113 48 541 187 57 167 chr17 10167293 10167539 -79337014 - MER20 DNA MER1_type 0 219 1 2163 107 0 0 chr17 10167634 10167925 -79336628 - AluSg SINE Alu -19 291 1 394 311 185 8 chr17 10167956 10168216 -79336337 + L2 LINE L2 2617 2922 -392 1856 140 7 10 chr17 10168821 10169128 -79335425 - AluJo SINE Alu 0 312 7 225 325 8 17 chr17 10169356 10169476 -79335077 - LTR67 LTR ERVL -11 546 428 196 304 72 14 chr17 10170228 10170297 -79334256 - MIR SINE MIR 0 262 190 2206 111 0 0 chr17 10170297 10170594 -79333959 - AluSx SINE Alu -15 297 1 437 237 9 26 chr17 10170598 10170712 -79333841 - MIR SINE MIR -54 208 97 2190 110 0 0 chr17 10170774 10171074 -79333479 - AluSx SINE Alu -12 300 1 2079 104 0 3 chr17 10171084 10171401 -79333152 - AluSq SINE Alu 0 316 1 283 232 71 18 chr17 10171618 10171730 -79332823 - L1MC4 LINE L1 -1 8041 7924 450 220 68 8 chr17 10171960 10172078 -79332475 + MER106B DNA MER1_type 935 1059 0 2439 60 0 0 chr17 10172113 10172413 -79332140 - AluY SINE Alu -11 300 1 1699 227 42 34 chr17 10172685 10172752 -79331801 + MLT1D LTR MaLR 1 66 -439 2476 124 13 5 chr17 10172752 10173124 -79331429 - THE1C LTR MaLR 0 375 1 1699 227 42 34 chr17 10173124 10173550 -79331003 + MLT1D LTR MaLR 66 498 -7 1123 120 12 132 chr17 10174640 10174898 -79329655 + AluJb SINE Alu 86 312 0 270 193 0 0 chr17 10175241 10175298 -79329255 + (TG)n Simple_repeat Simple_repeat 2 58 0 181 133 67 0 chr17 10175414 10175444 -79329109 - MIR SINE MIR -176 86 55 2084 102 0 33 chr17 10176316 10176620 -79327933 - AluSg SINE Alu -16 294 1 645 299 101 50 chr17 10176952 10177516 -79327037 - L2 LINE L2 -2 3311 2677 2207 107 0 0 chr17 10177516 10177815 -79326738 - AluSx SINE Alu -13 299 1 645 299 101 50 chr17 10177815 10177988 -79326565 - L2 LINE L2 -636 2677 2514 237 266 18 101 chr17 10178127 10178236 -79326317 - L2 LINE L2 -170 3102 3003 189 0 0 0 chr17 10178756 10178777 -79325776 + (TG)n Simple_repeat Simple_repeat 1 21 0 2140 108 3 9 chr17 10179458 10179773 -79324780 - AluSq SINE Alu 0 313 1 16150 18 0 0 chr17 10180490 10183086 -79321467 + L1HS LINE L1 3544 6139 -16 183 42 0 0 chr17 10183086 10183110 -79321443 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 1220 189 59 42 chr17 10183350 10183657 -79320896 + AluJo SINE Alu 1 312 0 277 242 15 0 chr17 10183703 10183769 -79320784 - HAL1 LINE L1 -854 1653 1587 643 227 138 32 chr17 10183773 10184020 -79320533 - L1ME3A LINE L1 -1 6169 5897 1439 240 60 0 chr17 10184060 10184540 -79320013 - L1ME LINE L1 -3523 2557 2049 281 261 63 59 chr17 10184513 10184751 -79319802 - L1ME LINE L1 -4308 1772 1534 * 282 29 0 0 chr17 10184751 10184786 -79319767 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 847 204 6 0 chr17 10184786 10184943 -79319610 - FAM SINE Alu -26 159 2 1073 265 106 55 chr17 10184984 10186097 -79318456 - L1ME LINE L1 -4689 1393 321 251 350 12 25 chr17 10186340 10186500 -79318053 - L1ME LINE L1 -5625 445 288 240 331 36 55 chr17 10186540 10186902 -79317651 - L1ME LINE L1 -5665 405 51 2088 125 0 0 chr17 10187319 10187614 -79316939 - AluSq SINE Alu -18 295 1 21 57 0 0 chr17 10187734 10187769 -79316784 + AT_rich Low_complexity Low_complexity 1 35 0 1976 108 21 4 chr17 10188312 10188624 -79315929 + AluSx SINE Alu 1 317 0 356 212 35 0 chr17 10188702 10188787 -79315766 + L1MA10 LINE L1 6234 6321 -13 195 42 0 0 chr17 10188791 10188815 -79315738 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1534 157 3 45 chr17 10188832 10189118 -79315435 - AluJo SINE Alu -38 274 1 2219 91 3 0 chr17 10189363 10189659 -79314894 - AluSg SINE Alu -13 297 1 422 48 24 48 chr17 10190544 10190628 -79313925 + (TTTC)n Simple_repeat Simple_repeat 3 84 0 1914 94 0 123 chr17 10190630 10190972 -79313581 - AluSq SINE Alu -3 300 1 1932 90 0 125 chr17 10191380 10191809 -79312744 + AluSq SINE Alu 1 386 0 2228 91 3 0 chr17 10192694 10192991 -79311562 + AluSg SINE Alu 1 298 -12 1579 157 0 45 chr17 10193237 10193524 -79311029 + AluJo SINE Alu 1 274 -38 195 42 0 0 chr17 10193541 10193565 -79310988 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 356 212 35 0 chr17 10193569 10193654 -79310899 - L1MA10 LINE L1 -13 6321 6234 1685 134 21 18 chr17 10193732 10194048 -79310505 - AluSx SINE Alu 0 317 1 1446 161 3 77 chr17 10194053 10194363 -79310190 - AluJo SINE Alu -12 300 14 806 244 104 37 chr17 10194382 10194710 -79309843 - L2 LINE L2 -569 2745 2396 1977 122 3 7 chr17 10195192 10195479 -79309074 - AluSx SINE Alu -26 286 1 2157 66 0 26 chr17 10195650 10195952 -79308601 - AluY SINE Alu -13 298 5 272 222 79 0 chr17 10196268 10196331 -79308222 + MER20B DNA MER1_type 516 583 -200 543 94 0 28 chr17 10196339 10196578 -79307975 + AluSx SINE Alu 1 292 -18 1191 119 0 0 chr17 10196578 10196746 -79307807 + AluSg/x SINE Alu 121 288 -24 644 213 52 6 chr17 10196766 10196940 -79307613 + MER20B DNA MER1_type 602 783 0 2146 91 0 3 chr17 10197867 10198237 -79306316 + AluSq SINE Alu 1 369 0 2249 85 0 0 chr17 10198742 10199047 -79305506 + AluSg SINE Alu 2 306 -4 400 253 63 11 chr17 10199124 10199219 -79305334 - MER5A DNA MER1_type -83 106 7 1793 108 0 4 chr17 10199603 10199852 -79304701 - AluSx SINE Alu -64 248 1 533 309 64 16 chr17 10200736 10200985 -79303568 + MIR SINE MIR 2 262 0 2059 124 0 3 chr17 10201124 10201422 -79303131 + AluSx SINE Alu 1 297 -15 318 296 77 61 chr17 10201605 10201902 -79302651 - L2 LINE L2 -130 3183 2882 3190 81 17 52 chr17 10202208 10202610 -79301943 - L1PA11 LINE L1 0 6174 5790 1779 155 0 32 chr17 10202610 10202920 -79301633 - AluSx SINE Alu -12 300 1 3190 81 17 52 chr17 10202920 10202999 -79301554 - L1PA11 LINE L1 -384 5790 5710 2014 104 14 0 chr17 10204318 10204626 -79299927 + AluSx SINE Alu 1 312 0 627 222 120 19 chr17 10204664 10204880 -79299673 + L1ME4a LINE L1 5882 6119 -2 404 281 67 15 chr17 10205594 10205729 -79298824 + MIR SINE MIR 87 228 -34 1979 65 59 52 chr17 10206075 10206381 -79298172 - AluSq SINE Alu -5 308 1 25 0 0 0 chr17 10207650 10207675 -79296878 + GC_rich Low_complexity Low_complexity 1 25 0 333 286 157 19 chr17 10208469 10208733 -79295820 - L2 LINE L2 -212 3060 2763 336 102 0 0 chr17 10209038 10209087 -79295466 + (A)n Simple_repeat Simple_repeat 1 49 0 640 182 297 21 chr17 10209361 10209553 -79295000 + MIR SINE MIR 2 246 -16 2368 49 0 52 chr17 10209699 10210026 -79294527 + AluY SINE Alu 1 310 -1 336 252 104 109 chr17 10210298 10210691 -79293862 - L2 LINE L2 -3 3310 2920 603 201 0 0 chr17 10210812 10210946 -79293607 + CT-rich Low_complexity Low_complexity 2 135 0 682 229 0 0 chr17 10210957 10211088 -79293465 - AluJo/FRAM SINE Alu -3 309 179 1557 101 0 0 chr17 10211089 10211298 -79293255 + AluSg/x SINE Alu 88 296 -14 1440 181 4 11 chr17 10211340 10211617 -79292936 - L1PA16 LINE L1 0 6166 5892 365 279 85 23 chr17 10211619 10211748 -79292805 - L1ME4a LINE L1 -4 6117 5981 300 258 141 31 chr17 10211776 10211939 -79292614 - L1ME4a LINE L1 -222 5899 5719 292 253 192 0 chr17 10211995 10212094 -79292459 + L1P LINE L1 4050 4167 -1979 * 318 265 61 30 chr17 10212093 10212225 -79292328 - L1ME4a LINE L1 -384 5737 5602 373 300 1 3 chr17 10212244 10212357 -79292196 - L1ME2 LINE L1 -2 6332 6059 1538 129 53 4 chr17 10212400 10212663 -79291890 - AluSx SINE Alu -36 276 1 538 170 86 0 chr17 10212664 10212779 -79291774 - L1MA8 LINE L1 -118 6173 6050 1242 144 36 0 chr17 10212819 10213013 -79291540 - L1PB1 LINE L1 -7 6144 5944 308 280 11 11 chr17 10213050 10213143 -79291410 - L1ME4a LINE L1 -693 5428 5336 2216 101 0 13 chr17 10213148 10213464 -79291089 - AluSx SINE Alu 0 312 1 503 308 64 20 chr17 10214347 10214597 -79289956 + MIR SINE MIR 2 262 0 2044 128 0 3 chr17 10214736 10215034 -79289519 + AluSx SINE Alu 1 297 -15 324 297 78 57 chr17 10215217 10215513 -79289040 - L2 LINE L2 -130 3183 2882 284 186 16 85 chr17 10215893 10215915 -79288638 + G-rich Low_complexity Low_complexity 6 28 -152 191 61 30 0 chr17 10215915 10215948 -79288605 + (TGGG)n Simple_repeat Simple_repeat 2 35 0 284 186 16 85 chr17 10215948 10216113 -79288440 + G-rich Low_complexity Low_complexity 28 180 0 * 291 228 30 42 chr17 10215976 10216143 -79288410 + (GGGTG)n Simple_repeat Simple_repeat 2 166 0 201 74 0 0 chr17 10216372 10216399 -79288154 + (GGGAA)n Simple_repeat Simple_repeat 2 28 0 380 336 91 16 chr17 10216399 10216828 -79287725 + HAL1 LINE L1 1153 1613 -894 316 291 77 50 chr17 10217369 10217589 -79286964 + L1MEc LINE L1 2161 2386 -4010 314 324 32 46 chr17 10217646 10217868 -79286685 + L1MEc LINE L1 2384 2599 -3616 1945 95 16 54 chr17 10217868 10218183 -79286370 + AluSq SINE Alu 1 303 -10 314 324 32 46 chr17 10218183 10218395 -79286158 + L1MEc LINE L1 2599 2812 -3403 288 86 0 0 chr17 10218409 10218444 -79286109 + tRNA-Trp tRNA tRNA 1 35 -40 357 276 98 0 chr17 10218536 10218659 -79285894 + L1MEc LINE L1 2943 3077 -3138 426 243 86 21 chr17 10218662 10218802 -79285751 + MER69 DNA AcHobo 1 149 -1077 396 255 23 42 chr17 10218978 10219117 -79285436 - MER20B DNA MER1_type -21 198 58 2365 88 3 0 chr17 10219117 10219412 -79285141 + AluSp SINE Alu 1 296 -17 1879 134 15 0 chr17 10219553 10219822 -79284731 - AluSx SINE Alu 0 312 40 2068 146 0 0 chr17 10219825 10220119 -79284434 - AluSx SINE Alu -17 295 2 1122 128 0 0 chr17 10220767 10220923 -79283630 - AluSp SINE Alu -21 292 137 2448 87 3 0 chr17 10221039 10221338 -79283215 - AluSp SINE Alu -5 308 9 2501 167 120 38 chr17 10221596 10221809 -79282744 - MER6A DNA MER2_type -261 604 410 2467 68 0 3 chr17 10221809 10222103 -79282450 + AluSc SINE Alu 1 293 -16 2501 167 120 38 chr17 10222103 10222447 -79282106 - MER6A DNA MER2_type -455 410 1 288 0 0 0 chr17 10222512 10222544 -79282009 + (CA)n Simple_repeat Simple_repeat 2 33 0 486 264 8 0 chr17 10222544 10222669 -79281884 + L1ME LINE L1 5617 5742 -428 2233 87 0 71 chr17 10222727 10223049 -79281504 - AluSg SINE Alu -11 299 1 216 0 0 0 chr17 10223610 10223634 -79280919 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 1846 149 0 11 chr17 10223634 10223915 -79280638 - AluJo SINE Alu -34 278 1 1342 38 0 6 chr17 10223927 10224085 -79280468 - AluY SINE Alu -4 307 151 973 145 11 32 chr17 10224959 10225145 -79279408 - MER5A DNA MER1_type -6 183 2 401 46 81 46 chr17 10225396 10225569 -79278984 + (TA)n Simple_repeat Simple_repeat 2 180 0 464 75 69 29 chr17 10225584 10225757 -79278796 + (TA)n Simple_repeat Simple_repeat 1 180 0 2343 77 0 74 chr17 10225908 10226245 -79278308 - AluSx SINE Alu 0 312 1 2183 104 0 0 chr17 10226753 10227042 -79277511 + AluSq SINE Alu 18 306 -7 338 274 18 26 chr17 10227076 10227189 -79277364 + L2 LINE L2 3200 3311 -2 1365 208 46 14 chr17 10228723 10229070 -79275483 - MLT1A1 LTR MaLR -7 358 1 2024 90 4 22 chr17 10229304 10229571 -79274982 - AluSg SINE Alu -10 300 39 262 109 0 22 chr17 10229793 10229839 -79274714 + MADE1 DNA Mariner 2 46 -34 415 267 0 0 chr17 10230135 10230240 -79274313 + L2 LINE L2 3161 3265 -7 23 0 0 0 chr17 10231440 10231463 -79273090 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr17 10231884 10231914 -79272639 + AT_rich Low_complexity Low_complexity 1 30 0 195 42 0 0 chr17 10232452 10232476 -79272077 + (A)n Simple_repeat Simple_repeat 1 24 0 2266 100 7 3 chr17 10232572 10232873 -79271680 + AluSx SINE Alu 1 302 -10 2439 164 55 49 chr17 10233868 10234154 -79270399 - LTR22 LTR ERVK 0 509 217 1828 88 32 0 chr17 10234154 10234404 -79270149 + L1PA6 LINE L1 5891 6148 -6 2439 164 55 49 chr17 10234404 10234623 -79269930 - LTR22 LTR ERVK -292 217 1 4042 36 13 2 chr17 10235014 10235490 -79269063 + L1PA3 LINE L1 5672 6152 -3 1105 190 43 9 chr17 10235517 10235749 -79268804 - MIR SINE MIR -10 252 13 837 282 115 18 chr17 10235771 10236101 -79268452 - HERVL LTR ERVL -3035 2619 2258 2490 60 0 17 chr17 10236250 10236552 -79268001 - AluY SINE Alu -14 297 1 446 314 49 20 chr17 10236687 10237069 -79267484 - HERVL LTR ERVL -3544 2220 1763 2193 117 0 10 chr17 10237141 10237450 -79267103 + AluSp SINE Alu 1 306 -7 1821 139 3 24 chr17 10237693 10238007 -79266546 - AluJo SINE Alu 0 308 1 2193 127 0 0 chr17 10238395 10238702 -79265851 - AluSx SINE Alu -5 307 1 236 200 19 133 chr17 10239101 10239206 -79265347 - L1M4 LINE L1 -854 5292 5200 465 216 32 0 chr17 10239216 10239341 -79265212 - L1M4 LINE L1 -912 5234 5106 * 1272 250 71 47 chr17 10239321 10239719 -79264834 - L1M4 LINE L1 -2717 3429 3013 2243 101 19 7 chr17 10239719 10239898 -79264655 - AluSq SINE Alu -1 312 126 192 40 0 0 chr17 10239898 10239923 -79264630 + (TTG)n Simple_repeat Simple_repeat 3 27 0 2243 101 19 7 chr17 10239923 10240051 -79264502 - AluSq SINE Alu -187 126 1 1272 250 71 47 chr17 10240051 10240200 -79264353 - L1M4 LINE L1 -3133 3013 2869 2065 126 0 0 chr17 10240584 10240878 -79263675 - AluSx SINE Alu -18 294 1 194 350 41 10 chr17 10241003 10241100 -79263453 + MIR SINE MIR 47 146 -116 335 241 58 0 chr17 10241105 10241192 -79263361 - MER63 DNA MER1_type 0 1060 969 * 465 186 137 0 chr17 10241177 10241279 -79263274 - MER63 DNA MER1_type -93 743 2 305 303 87 16 chr17 10241356 10241541 -79263012 + MIR SINE MIR 9 206 -56 2331 84 0 7 chr17 10241626 10241923 -79262630 + AluSx SINE Alu 1 295 -17 409 280 63 0 chr17 10242084 10242227 -79262326 - MIR SINE MIR -6 256 105 369 130 0 0 chr17 10242244 10242298 -79262255 + MER116 DNA Mariner 27 80 0 2190 134 0 0 chr17 10242408 10242715 -79261838 - AluSq SINE Alu -6 307 1 1499 174 4 0 chr17 10242838 10243091 -79261462 + L1PA16 LINE L1 5791 6044 -122 472 206 11 0 chr17 10243178 10243270 -79261283 + L1PB4 LINE L1 6050 6142 -14 1864 137 4 11 chr17 10243315 10243592 -79260961 + AluSx SINE Alu 1 275 -37 2183 98 17 3 chr17 10244045 10244332 -79260221 - AluY SINE Alu -20 291 1 1716 181 0 26 chr17 10244522 10244826 -79259727 - AluJb SINE Alu -16 296 1 2418 79 3 0 chr17 10245237 10245529 -79259024 - AluSg SINE Alu -17 293 1 268 278 79 63 chr17 10245848 10245974 -79258579 + MIR SINE MIR 19 146 -62 345 314 208 0 chr17 10246011 10246218 -79258335 + MIR SINE MIR 13 262 0 1520 195 182 90 chr17 10246590 10246750 -79257803 - LTR41 LTR ERVL -6 767 623 1780 122 107 7 chr17 10246750 10247021 -79257532 + AluSq SINE Alu 1 298 -15 1520 195 182 90 chr17 10247021 10247507 -79257046 - LTR41 LTR ERVL -150 623 61 2269 105 0 16 chr17 10247521 10247836 -79256717 - AluSg SINE Alu 0 310 1 324 164 96 14 chr17 10247836 10247909 -79256644 - LTR41 LTR ERVL -694 79 1 23 0 0 0 chr17 10248573 10248596 -79255957 + AT_rich Low_complexity Low_complexity 1 23 0 2177 103 4 0 chr17 10248596 10248877 -79255676 - AluSx SINE Alu -27 285 4 2063 133 0 20 chr17 10249372 10249674 -79254879 + AluSx SINE Alu 1 296 -16 26 30 0 0 chr17 10250585 10250618 -79253935 + AT_rich Low_complexity Low_complexity 1 33 0 1815 117 8 11 chr17 10250985 10251251 -79253302 + AluSg SINE Alu 45 309 -1 25 0 0 0 chr17 10251346 10251371 -79253182 + AT_rich Low_complexity Low_complexity 1 25 0 227 283 139 53 chr17 10251463 10251572 -79252981 + L1ME3 LINE L1 5276 5374 -747 2548 63 3 0 chr17 10251572 10251872 -79252681 + AluSp SINE Alu 6 306 -7 227 283 139 53 chr17 10251872 10252215 -79252338 + L1ME3 LINE L1 5374 5794 -327 6470 103 32 15 chr17 10252761 10253763 -79250790 - L1MA5 LINE L1 -2 6298 5280 291 203 0 0 chr17 10254002 10254066 -79250487 + (TG)n Simple_repeat Simple_repeat 2 65 0 2514 55 0 10 chr17 10255063 10255373 -79249180 - AluY SINE Alu -4 307 1 2417 82 0 0 chr17 10255444 10255735 -79248818 - AluSc SINE Alu -18 291 1 1722 164 10 17 chr17 10255777 10256075 -79248478 - AluJb SINE Alu -16 296 1 1875 159 0 17 chr17 10256499 10256800 -79247753 - AluJo SINE Alu -16 296 1 378 179 193 14 chr17 10257503 10257643 -79246910 - L1MB4 LINE L1 -6 6174 6010 2215 109 7 0 chr17 10257690 10257984 -79246569 + AluSx SINE Alu 2 297 -15 1837 182 22 25 chr17 10257984 10258195 -79246358 - L1MB4 LINE L1 -152 6028 5817 2212 111 7 10 chr17 10258195 10258502 -79246051 - AluSp SINE Alu -7 306 1 1837 182 22 25 chr17 10258502 10258658 -79245895 - L1MB4 LINE L1 -363 5817 5662 2250 111 0 10 chr17 10259296 10259603 -79244950 - AluSx SINE Alu -8 304 1 256 280 32 40 chr17 10259616 10259741 -79244812 + MIR SINE MIR 37 160 -102 1046 138 23 0 chr17 10260605 10260779 -79243774 + L1ME4a LINE L1 5301 5478 -700 2215 102 3 10 chr17 10260779 10261072 -79243481 - AluSx SINE Alu -21 291 1 2116 92 34 7 chr17 10261082 10261377 -79243176 - AluSg SINE Alu -7 303 1 2512 63 0 3 chr17 10261711 10262012 -79242541 + AluY SINE Alu 1 300 -11 2266 108 3 0 chr17 10262236 10262531 -79242022 - AluSx SINE Alu -16 296 1 263 217 169 21 chr17 10262766 10262955 -79241598 + L1ME4a LINE L1 5840 6056 -65 1692 81 190 8 chr17 10263188 10263435 -79241118 + AluSg1 SINE Alu 1 292 -17 1344 246 43 33 chr17 10263537 10263928 -79240625 + L1ME3 LINE L1 5768 6162 0 237 119 0 0 chr17 10264314 10264356 -79240197 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 26 30 0 0 chr17 10264356 10264389 -79240164 + AT_rich Low_complexity Low_complexity 1 33 0 589 151 27 16 chr17 10264389 10264872 -79239681 + (TA)n Simple_repeat Simple_repeat 1 488 0 304 224 20 51 chr17 10264872 10264970 -79239583 - L1MCa LINE L1 -4361 2065 1971 430 196 52 12 chr17 10264987 10265160 -79239393 + (TA)n Simple_repeat Simple_repeat 1 180 0 2042 104 0 0 chr17 10266024 10266294 -79238259 - AluSc SINE Alu -3 306 37 789 318 55 13 chr17 10267787 10268171 -79236382 - LTR16C LTR ERVL -2 489 90 212 340 50 35 chr17 10268596 10268737 -79235816 + MIR SINE MIR 55 197 -65 320 263 118 33 chr17 10268827 10268979 -79235574 + MLT1K LTR MaLR 13 177 -411 430 300 38 33 chr17 10269023 10269233 -79235320 + MLT1K LTR MaLR 257 467 -121 486 75 0 0 chr17 10269533 10269600 -79234953 + (TTCC)n Simple_repeat Simple_repeat 4 70 0 189 0 0 0 chr17 10269598 10269619 -79234934 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 995 130 14 0 chr17 10269609 10269769 -79234784 - AluSg/x SINE Alu -10 302 151 530 306 41 0 chr17 10270259 10270297 -79234256 - LTR33 LTR ERVL 0 521 486 1739 204 79 27 chr17 10270297 10270739 -79233814 - MLT1C LTR MaLR -2 465 1 530 306 41 0 chr17 10270739 10270896 -79233657 - LTR33 LTR ERVL -35 486 318 2107 93 10 0 chr17 10271238 10271540 -79233013 + AluSq SINE Alu 1 305 -8 196 111 0 0 chr17 10271864 10271891 -79232662 + MIR SINE MIR 118 144 -118 270 0 0 0 chr17 10272087 10272117 -79232436 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2152 83 3 0 chr17 10273063 10273352 -79231201 + AluY SINE Alu 1 290 -21 2041 111 9 19 chr17 10273527 10273842 -79230711 - AluSx SINE Alu 0 312 1 1024 80 13 13 chr17 10274084 10274234 -79230319 - AluSg SINE Alu -160 150 1 326 164 96 14 chr17 10274234 10274307 -79230246 - LTR41 LTR ERVL -694 79 1 372 253 22 101 chr17 10274913 10275091 -79229462 - L1ME4a LINE L1 -2 6119 5956 263 226 21 21 chr17 10275661 10275754 -79228799 - L1M4 LINE L1 -1701 4445 4353 1865 139 0 0 chr17 10275774 10276054 -79228499 - AluJb SINE Alu -32 280 1 318 326 156 28 chr17 10276152 10276434 -79228119 - L1M4 LINE L1 -1946 4200 3883 288 257 44 29 chr17 10276788 10276924 -79227629 - L1MEd LINE L1 -3896 2233 2096 813 222 51 34 chr17 10277118 10277411 -79227142 - L1M4 LINE L1 -1455 4691 4394 444 256 68 44 chr17 10277441 10277520 -79227033 - L1MEd LINE L1 -4938 1181 1105 2130 128 0 0 chr17 10277520 10277826 -79226727 + AluSx SINE Alu 1 306 -6 444 256 68 44 chr17 10277826 10278039 -79226514 - L1MEd LINE L1 -5014 1105 882 436 317 105 62 chr17 10278603 10278909 -79225644 - MLT1K LTR MaLR -257 331 13 2130 105 0 0 chr17 10280317 10280612 -79223941 - AluSg SINE Alu -15 295 1 2052 102 0 3 chr17 10281614 10281907 -79222646 + AluY SINE Alu 1 292 -19 839 60 0 26 chr17 10281936 10282053 -79222500 + L1PA5 LINE L1 6041 6154 0 729 144 20 0 chr17 10282975 10283121 -79221432 + (TCTA)n Simple_repeat Simple_repeat 4 152 0 378 0 0 0 chr17 10283414 10283456 -79221097 + (CA)n Simple_repeat Simple_repeat 2 43 0 2233 151 15 33 chr17 10283752 10284149 -79220404 - MLT1B LTR MaLR 0 390 1 2153 107 0 7 chr17 10284577 10284885 -79219668 - AluSg SINE Alu -4 306 1 2027 106 16 13 chr17 10285568 10285871 -79218682 - AluSx SINE Alu -8 304 1 1808 91 72 11 chr17 10286032 10286325 -79218228 - AluSg SINE Alu 0 309 1 1881 109 49 0 chr17 10286589 10286873 -79217680 - AluSx SINE Alu -14 298 1 2142 62 0 4 chr17 10287207 10287480 -79217073 + AluY SINE Alu 1 272 -39 1916 91 11 0 chr17 10287773 10288038 -79216515 + L1PA8 LINE L1 5905 6172 0 601 232 9 14 chr17 10288045 10288256 -79216297 - L1MCa LINE L1 -3132 3294 3085 336 278 158 23 chr17 10288303 10288436 -79216117 - L1MCa LINE L1 -4483 1943 1793 1113 274 117 22 chr17 10289017 10289097 -79215456 - LTR16C LTR ERVL -4 487 416 1986 116 7 13 chr17 10289097 10289407 -79215146 + AluSx SINE Alu 1 308 -4 1113 274 117 22 chr17 10289407 10289771 -79214782 - LTR16C LTR ERVL -75 416 1 734 247 88 18 chr17 10289968 10290178 -79214375 + L1MC/D LINE L1 5509 5738 -2070 2327 75 0 3 chr17 10290178 10290472 -79214081 + AluY SINE Alu 1 293 -18 967 148 24 0 chr17 10290472 10290641 -79213912 - L1M4 LINE L1 -700 5478 5306 308 268 28 63 chr17 10291501 10291643 -79212910 - MIR SINE MIR -89 173 37 2159 115 0 6 chr17 10291656 10291968 -79212585 + AluSx SINE Alu 1 310 -2 716 233 186 36 chr17 10292515 10292697 -79211856 + MER5C DNA MER1_type 8 162 -162 2010 105 0 3 chr17 10292697 10293026 -79211527 - AluSx SINE Alu 0 328 1 716 233 186 36 chr17 10293026 10293117 -79211436 + MER5C DNA MER1_type 162 323 -1 1930 176 14 39 chr17 10293405 10293445 -79211108 - L1MB3 LINE L1 0 6183 6144 1967 113 0 7 chr17 10293445 10293727 -79210826 - AluSc SINE Alu -21 288 9 1930 176 14 39 chr17 10293727 10294102 -79210451 - L1MB3 LINE L1 -39 6144 5778 442 327 133 26 chr17 10294145 10294226 -79210327 + L2 LINE L2 2090 2161 -1153 1982 129 3 3 chr17 10294226 10294536 -79210017 - AluSx SINE Alu -2 310 1 442 327 133 26 chr17 10294536 10294800 -79209753 + L2 LINE L2 2161 2472 -842 213 319 0 0 chr17 10294817 10294889 -79209664 + L2 LINE L2 2737 2808 -506 2129 113 0 0 chr17 10295037 10295360 -79209193 + AluSx SINE Alu 1 312 0 5054 160 21 7 chr17 10295439 10296483 -79208070 - L1PA16 LINE L1 -13 6153 5100 860 227 16 77 chr17 10298622 10298869 -79205684 - MIR SINE MIR -23 239 8 379 282 86 59 chr17 10298919 10299174 -79205379 - L2 LINE L2 -2 3270 3009 1413 173 67 28 chr17 10300182 10300466 -79204087 + AluJo SINE Alu 1 295 -17 248 219 0 55 chr17 10301845 10301918 -79202635 - MIR SINE MIR -174 88 20 991 226 107 53 chr17 10301990 10302402 -79202151 - HAL1 LINE L1 -779 1728 1295 1954 114 0 44 chr17 10302405 10302720 -79201833 - AluSx SINE Alu -11 301 1 1218 264 67 96 chr17 10303198 10303576 -79200977 - L1MC4a LINE L1 -748 5398 5721 2279 92 3 13 chr17 10303576 10303891 -79200662 + AluSx SINE Alu 1 312 0 1218 264 67 96 chr17 10303891 10304704 -79199849 - L1MC4a LINE L1 -424 5722 4887 2314 84 0 3 chr17 10304735 10305046 -79199507 - AluSg SINE Alu 0 310 1 2452 47 0 3 chr17 10305468 10305766 -79198787 + AluY SINE Alu 1 297 -14 30 45 0 0 chr17 10305768 10305812 -79198741 + AT_rich Low_complexity Low_complexity 1 44 0 881 351 93 13 chr17 10305895 10306667 -79197886 - L2 LINE L2 0 3272 2439 593 231 77 122 chr17 10306677 10306724 -79197829 + MER58C DNA MER1_type 3 51 -2369 2228 98 0 3 chr17 10306724 10307030 -79197523 - AluSg SINE Alu -5 305 1 593 231 77 122 chr17 10307030 10307203 -79197350 + MER58C DNA MER1_type 51 213 -2 2071 102 0 0 chr17 10307537 10307850 -79196703 + AluSx SINE Alu 1 313 0 1984 77 0 22 chr17 10308604 10308876 -79195677 - AluSc SINE Alu -7 302 37 491 258 92 7 chr17 10309179 10309425 -79195128 + LTR40a LTR ERVL 123 358 -104 2253 92 0 6 chr17 10309519 10309834 -79194719 - AluSq SINE Alu 0 313 1 1083 248 91 98 chr17 10310584 10310889 -79193664 - L2 LINE L2 -248 3065 2760 270 0 0 0 chr17 10310889 10310919 -79193634 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1083 248 91 98 chr17 10310919 10310951 -79193602 - L2 LINE L2 -553 2760 2729 1848 124 51 40 chr17 10310951 10311203 -79193350 - L1MA4 LINE L1 -11 6289 6030 2073 104 7 0 chr17 10311203 10311492 -79193061 - AluSx SINE Alu -21 291 1 1848 124 51 40 chr17 10311492 10311593 -79192960 - L1MA4 LINE L1 -270 6030 5932 1083 248 91 98 chr17 10311593 10312009 -79192544 - L2 LINE L2 -584 2729 2315 1982 126 11 0 chr17 10312011 10312380 -79192173 - Charlie3 DNA MER1_type -4 2706 1 891 291 96 14 chr17 10312409 10312504 -79192049 - L2 LINE L2 -1060 2254 2168 2372 70 0 10 chr17 10312504 10312806 -79191747 + AluSg SINE Alu 1 299 -11 891 291 96 14 chr17 10312806 10313139 -79191414 - L2 LINE L2 -1146 2168 1791 1614 177 29 0 chr17 10313299 10313576 -79190977 + AluJb SINE Alu 17 301 -11 839 164 3 0 chr17 10313597 10314233 -79190320 + (TG)n Simple_repeat Simple_repeat 1 638 0 23 54 0 0 chr17 10314325 10314362 -79190191 + AT_rich Low_complexity Low_complexity 1 37 0 314 195 130 0 chr17 10314454 10314531 -79190022 - L1ME3A LINE L1 -52 6118 6032 2050 84 3 71 chr17 10314959 10315282 -79189271 + AluSx SINE Alu 1 301 -11 192 309 29 0 chr17 10315667 10315735 -79188818 - MIR SINE MIR -42 220 151 431 279 53 21 chr17 10315918 10316108 -79188445 + MIR3 SINE MIR 8 203 -5 977 245 69 35 chr17 10316644 10316962 -79187591 - MLT1I LTR MaLR -1 408 80 556 210 156 27 chr17 10317339 10317525 -79187028 + MER63A DNA MER1_type 1 210 0 222 345 69 43 chr17 10317556 10317672 -79186881 + L2 LINE L2 3101 3219 -53 2232 139 43 114 chr17 10317935 10318452 -79186101 + LTR12 LTR ERV1 1 480 -234 198 182 0 0 chr17 10319259 10319292 -79185261 + MIR SINE MIR 73 105 -157 576 169 0 0 chr17 10319742 10319831 -79184722 - FLAM_A SINE Alu -49 93 5 391 308 73 6 chr17 10320339 10320496 -79184057 + MIR SINE MIR 47 218 -44 2536 175 53 46 chr17 10321359 10321885 -79182668 - LTR31 LTR ERV1 -15 604 75 2199 266 101 60 chr17 10321979 10323402 -79181151 - HAL1 LINE L1 -607 1900 420 291 267 44 0 chr17 10323622 10323712 -79180841 - HAL1 LINE L1 -2370 137 44 682 269 44 26 chr17 10323865 10324092 -79180461 + MIR SINE MIR 32 262 0 2362 96 3 0 chr17 10324343 10324645 -79179908 + AluSx SINE Alu 1 303 -9 739 281 25 34 chr17 10324706 10324941 -79179612 - MIR SINE MIR -29 233 1 21 0 0 0 chr17 10325876 10325897 -79178656 + AT_rich Low_complexity Low_complexity 1 21 0 2274 114 0 25 chr17 10326234 10326549 -79178004 + AluSx SINE Alu 5 311 -1 393 61 0 61 chr17 10327168 10327234 -79177319 - L1PA16 LINE L1 -2 6164 6103 2171 102 14 10 chr17 10327250 10327545 -79177008 + AluSq SINE Alu 2 297 -16 300 111 0 0 chr17 10327548 10327593 -79176960 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 507 207 9 9 chr17 10327790 10327906 -79176647 - L1ME3A LINE L1 -9 6161 6046 224 267 150 0 chr17 10328033 10328093 -79176460 + L2 LINE L2 3232 3300 -13 183 42 0 0 chr17 10328133 10328157 -79176396 + (CA)n Simple_repeat Simple_repeat 2 25 0 742 270 98 14 chr17 10328194 10328332 -79176221 + MIR SINE MIR 3 167 -95 2411 105 0 0 chr17 10328332 10328636 -79175917 - AluSx SINE Alu -8 304 1 742 270 98 14 chr17 10328636 10328712 -79175841 + MIR SINE MIR 167 235 -27 316 87 0 0 chr17 10329891 10329937 -79174616 + AluSq/x SINE Alu 90 135 -167 2297 108 0 0 chr17 10329937 10330232 -79174321 + AluSx SINE Alu 1 295 -17 804 156 0 8 chr17 10330441 10330569 -79173984 + FLAM_C SINE Alu 1 127 -16 1821 57 0 25 chr17 10330569 10330843 -79173710 + L1PA8 LINE L1 5929 6172 0 1615 137 128 9 chr17 10331104 10331441 -79173112 - L1MB2 LINE L1 0 6171 5795 2258 93 0 7 chr17 10331458 10331748 -79172805 - AluSc SINE Alu -21 288 1 1619 167 10 61 chr17 10332045 10332193 -79172360 + AluJo SINE Alu 1 126 -186 1875 139 0 77 chr17 10332193 10332516 -79172037 + AluSx SINE Alu 1 298 -14 1619 167 10 61 chr17 10332516 10332679 -79171874 + AluJo SINE Alu 126 296 -16 296 294 55 60 chr17 10332963 10333164 -79171389 - MIR SINE MIR -31 231 32 2488 77 7 3 chr17 10333635 10333945 -79170608 + AluSq SINE Alu 1 311 -2 285 97 0 48 chr17 10333949 10334011 -79170542 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 441 256 26 8 chr17 10334554 10334671 -79169882 + L2 LINE L2 1868 1986 -1328 2257 100 10 3 chr17 10334687 10334987 -79169566 + AluSc SINE Alu 1 302 -7 525 228 49 9 chr17 10335078 10335226 -79169327 + L1ME3A LINE L1 6001 6161 -3 672 168 0 0 chr17 10335298 10335423 -79169130 + (CA)n Simple_repeat Simple_repeat 1 125 0 262 209 4 0 chr17 10335702 10335760 -79168793 - MIR SINE MIR -59 149 90 276 321 0 0 chr17 10336828 10336909 -79167644 + Charlie8 DNA MER1_type 5 85 -2332 755 238 138 0 chr17 10336939 10337128 -79167425 + MIR SINE MIR 12 226 -36 348 298 71 0 chr17 10337543 10337711 -79166842 - MARNA DNA Mariner -78 508 329 326 316 88 0 chr17 10338218 10338332 -79166221 + L2 LINE L2 3147 3270 -2 452 330 109 0 chr17 10338398 10338619 -79165934 - L1M4 LINE L1 -3321 2825 2581 2309 97 0 0 chr17 10339239 10339527 -79165026 + AluSx SINE Alu 1 288 -24 27 0 0 0 chr17 10339527 10339554 -79164999 + AT_rich Low_complexity Low_complexity 1 27 0 252 291 19 19 chr17 10339625 10339728 -79164825 + HsTC2 DNA Tc2 1 103 -1795 1894 161 0 13 chr17 10339741 10340046 -79164507 + AluJb SINE Alu 8 308 -4 234 220 0 0 chr17 10340050 10340100 -79164453 + HsTC2 DNA Tc2 40 89 -1809 2383 95 0 0 chr17 10340500 10340794 -79163759 + AluSq SINE Alu 1 294 -19 361 324 0 9 chr17 10340915 10341026 -79163527 + MIR SINE MIR 32 141 -121 2414 59 0 14 chr17 10341378 10341705 -79162848 - AluSq SINE Alu 0 323 1 21 0 0 0 chr17 10342813 10342834 -79161719 + AT_rich Low_complexity Low_complexity 1 21 0 562 301 107 35 chr17 10342909 10343213 -79161340 - L1MC/D LINE L1 -764 5382 5147 2371 88 0 28 chr17 10343213 10343247 -79161306 - AluY SINE Alu -1 310 277 195 42 0 0 chr17 10343247 10343271 -79161282 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2371 88 0 28 chr17 10343271 10343555 -79160998 - AluY SINE Alu -34 277 1 562 301 107 35 chr17 10343555 10343732 -79160821 - L1MC/D LINE L1 -999 5147 4984 1785 129 98 0 chr17 10343806 10344062 -79160491 - AluSx SINE Alu -31 281 1 238 248 177 9 chr17 10344291 10344404 -79160149 - L1MC/D LINE L1 -1490 4656 4525 1147 212 81 90 chr17 10344989 10345446 -79159107 + LTR16A1 LTR ERVL 1 453 -4 206 200 0 60 chr17 10345451 10345501 -79159052 + MIR SINE MIR 159 205 -57 420 308 112 33 chr17 10345849 10346063 -79158490 + L3 LINE CR1 1344 1574 -3 229 279 143 68 chr17 10346580 10346845 -79157708 - MARNA DNA Mariner -42 544 260 632 205 39 32 chr17 10346907 10347063 -79157490 + MER103 DNA DNA 9 165 -1 326 169 0 17 chr17 10347204 10347263 -79157290 + L2 LINE L2 3254 3311 -2 367 350 51 6 chr17 10347274 10347451 -79157102 - MARNA DNA Mariner -343 243 59 1591 141 17 0 chr17 10348720 10348954 -79155599 + AluSg SINE Alu 55 292 -18 205 296 96 48 chr17 10349316 10349441 -79155112 + MIR3 SINE MIR 5 135 -73 2331 78 7 13 chr17 10349453 10349762 -79154791 - AluY SINE Alu -4 307 1 715 249 148 22 chr17 10349822 10350180 -79154373 + MER113 DNA MER1_type? 24 426 -95 355 175 12 9 chr17 10350219 10350301 -79154252 + L1PA16 LINE L1 6087 6166 0 210 296 148 28 chr17 10350834 10350942 -79153611 - L2 LINE L2 -20 3252 3132 1876 152 32 76 chr17 10351413 10351641 -79152912 - MLT1B LTR MaLR 0 390 186 2318 119 0 3 chr17 10351641 10351952 -79152601 - AluSx SINE Alu -2 310 1 1876 152 32 76 chr17 10351952 10352131 -79152422 - MLT1B LTR MaLR -204 186 1 454 194 104 22 chr17 10352454 10352588 -79151965 - MLT1J1 LTR MaLR -301 145 1 2031 143 4 0 chr17 10353288 10353588 -79150965 + AluSx SINE Alu 1 301 0 226 290 176 23 chr17 10353604 10353735 -79150818 + L2 LINE L2 3122 3272 0 2198 91 24 3 chr17 10353849 10354147 -79150406 + AluSx SINE Alu 2 305 -7 465 265 26 50 chr17 10354600 10354796 -79149757 - MIR SINE MIR -52 210 14 220 224 149 0 chr17 10354773 10354840 -79149713 + MIR3 SINE MIR 110 186 -22 * 398 255 0 149 chr17 10355464 10355652 -79148901 + MIR SINE MIR 29 188 -74 802 189 18 24 chr17 10357197 10357366 -79147187 + MER3 DNA MER1_type 23 190 -19 229 159 48 32 chr17 10357426 10357489 -79147064 + C-rich Low_complexity Low_complexity 6 69 0 2317 107 0 19 chr17 10357672 10357990 -79146563 + AluSx SINE Alu 1 312 0 1044 189 39 45 chr17 10358130 10358202 -79146351 - MLT1A1 LTR MaLR -81 284 213 1752 152 81 3 chr17 10358202 10358485 -79146068 - AluJo SINE Alu -7 305 1 1044 189 39 45 chr17 10358485 10358698 -79145855 - MLT1A1 LTR MaLR -152 213 1 335 180 0 0 chr17 10359410 10359471 -79145082 + MIR SINE MIR 95 155 -107 2322 84 7 3 chr17 10359520 10359816 -79144737 - AluSg SINE Alu -13 297 1 1782 92 0 17 chr17 10360689 10360927 -79143626 + AluSc SINE Alu 1 234 -75 268 164 18 36 chr17 10360928 10360983 -79143570 + MIR SINE MIR 90 143 -65 485 258 13 38 chr17 10361070 10361229 -79143324 + MER103 DNA DNA 3 157 -9 2319 156 48 24 chr17 10361376 10361794 -79142759 + MSTC LTR MaLR 1 428 0 831 156 0 0 chr17 10361941 10362120 -79142433 + (TG)n Simple_repeat Simple_repeat 1 179 0 902 151 6 0 chr17 10362158 10362525 -79142028 + (TG)n Simple_repeat Simple_repeat 1 369 0 2218 118 14 0 chr17 10363016 10363313 -79141240 - AluSx SINE Alu -11 301 1 247 347 82 12 chr17 10363488 10363658 -79140895 + L2 LINE L2 2902 3083 -189 2033 191 3 3 chr17 10363660 10363899 -79140654 - MSTA LTR MaLR 0 428 187 2088 93 3 74 chr17 10363899 10364240 -79140313 - AluSq SINE Alu 0 313 5 2033 191 3 3 chr17 10364240 10364371 -79140182 - MSTA LTR MaLR -240 188 58 252 193 0 53 chr17 10364646 10364703 -79139850 - MER5A DNA MER1_type -2 187 134 656 299 91 29 chr17 10364763 10365214 -79139339 + HAL1 LINE L1 2024 2502 -5 2016 108 73 3 chr17 10365215 10365501 -79139052 - AluSq SINE Alu -7 306 1 990 164 0 18 chr17 10365521 10365713 -79138840 + AluSp SINE Alu 129 317 0 267 333 29 39 chr17 10365714 10365816 -79138737 + MER5A DNA MER1_type 64 164 -25 1614 159 47 43 chr17 10366250 10366551 -79138002 - AluJb SINE Alu -10 302 1 1060 255 9 0 chr17 10367003 10367234 -79137319 - MIR SINE MIR -6 256 24 237 167 0 0 chr17 10367265 10367307 -79137246 - MIR SINE MIR -199 63 22 1919 125 11 4 chr17 10367898 10368210 -79136343 - AluSq SINE Alu 0 314 1 2399 132 55 38 chr17 10368221 10368271 -79136282 - L1MB3 LINE L1 -1 6182 6134 2307 107 3 0 chr17 10368271 10368570 -79135983 - AluSx SINE Alu -12 300 1 1828 83 0 9 chr17 10368579 10368809 -79135744 - AluSg/x SINE Alu -6 306 79 2399 132 55 38 chr17 10368809 10369218 -79135335 - L1MB3 LINE L1 -56 6127 5705 584 214 76 7 chr17 10370681 10370826 -79133727 + MIR SINE MIR 30 184 -78 496 296 104 19 chr17 10371887 10372194 -79132359 - L1ME4a LINE L1 -1 6120 5788 259 294 48 48 chr17 10372279 10372452 -79132101 - L1ME4a LINE L1 0 6121 5945 2135 89 11 0 chr17 10372452 10372757 -79131796 - AluSx SINE Alu 0 308 1 259 294 48 48 chr17 10372757 10372834 -79131719 - L1ME4a LINE L1 -175 5946 5870 424 299 40 45 chr17 10372843 10373044 -79131509 - MIR SINE MIR 0 262 63 1924 131 10 3 chr17 10373269 10373567 -79130986 + AluSg SINE Alu 1 300 -10 372 301 8 6 chr17 10374101 10374219 -79130334 - MIR SINE MIR -50 212 96 32 0 0 0 chr17 10374894 10374926 -79129627 + AT_rich Low_complexity Low_complexity 1 32 0 402 282 106 57 chr17 10374932 10375460 -79129093 + L1ME4a LINE L1 5567 6120 -1 1705 230 4 4 chr17 10376177 10376628 -79127925 + MER119 DNA MER1_type 2 549 -34 202 334 74 42 chr17 10376926 10377237 -79127316 - L2 LINE L2 -46 3226 2906 261 264 46 81 chr17 10377617 10377704 -79126849 + L2 LINE L2 3169 3252 -20 1676 179 0 28 chr17 10377742 10377877 -79126676 + AluJb SINE Alu 3 140 -172 1868 122 38 0 chr17 10377877 10378165 -79126388 + AluSg SINE Alu 1 299 -11 1676 179 0 28 chr17 10378165 10378348 -79126205 + AluJb SINE Alu 140 312 0 2142 113 0 10 chr17 10378565 10378875 -79125678 + AluSc SINE Alu 1 307 -2 805 254 119 20 chr17 10379488 10379925 -79124628 - MLT1G LTR MaLR 0 590 3 1909 74 0 0 chr17 10380609 10380853 -79123700 - AluSc SINE Alu -8 301 58 2144 126 7 0 chr17 10381342 10381652 -79122901 + AluSx SINE Alu 1 312 0 2524 61 28 56 chr17 10382224 10382407 -79122146 - L1MA1 LINE L1 0 6302 6115 258 32 0 0 chr17 10382407 10382438 -79122115 + (TTA)n Simple_repeat Simple_repeat 3 33 0 2074 75 3 20 chr17 10382445 10382737 -79121816 - AluY SINE Alu -24 287 1 2524 61 28 56 chr17 10382737 10382940 -79121613 - L1MA1 LINE L1 -193 6109 5919 394 293 55 30 chr17 10383751 10383915 -79120638 + MIR3 SINE MIR 14 181 -27 711 64 0 0 chr17 10384466 10384560 -79119993 + AluY SINE Alu 152 245 -66 191 381 42 5 chr17 10384767 10384956 -79119597 - L2 LINE L2 -660 2654 2459 228 111 0 0 chr17 10384973 10385009 -79119544 + (TCC)n Simple_repeat Simple_repeat 2 37 0 2096 103 17 0 chr17 10385567 10385858 -79118695 - AluSg SINE Alu -14 296 1 1070 287 96 37 chr17 10386032 10386602 -79117951 - L2 LINE L2 0 3313 2659 2171 84 3 36 chr17 10386602 10386910 -79117643 - AluSx SINE Alu -14 298 1 1070 287 96 37 chr17 10386910 10387313 -79117240 - L2 LINE L2 -654 2659 2281 319 248 95 48 chr17 10387500 10387710 -79116843 - MIR SINE MIR -30 232 13 451 291 64 61 chr17 10388435 10388731 -79115822 + L2 LINE L2 2932 3228 -85 413 315 82 0 chr17 10388880 10389064 -79115489 + MIR SINE MIR 40 238 -24 206 230 0 115 chr17 10389078 10389165 -79115388 + L2 LINE L2 3195 3271 -1 222 324 65 28 chr17 10389399 10389507 -79115046 - L2 LINE L2 -13 3300 3189 181 321 19 0 chr17 10389842 10389895 -79114658 - L2 LINE L2 -576 2738 2685 249 33 0 0 chr17 10390247 10390277 -79114276 + (T)n Simple_repeat Simple_repeat 1 30 0 2389 87 0 0 chr17 10390384 10390696 -79113857 - AluSx SINE Alu 0 312 1 1288 135 50 0 chr17 10390769 10390969 -79113584 - AluJb SINE Alu -17 295 86 319 306 109 7 chr17 10391126 10391273 -79113280 + MIR SINE MIR 98 259 -3 330 26 0 0 chr17 10391441 10391480 -79113073 + (TG)n Simple_repeat Simple_repeat 2 40 0 1840 162 0 10 chr17 10392039 10392348 -79112205 + AluJo SINE Alu 1 306 -6 320 228 40 39 chr17 10392352 10392454 -79112099 + L1MC4 LINE L1 7836 8040 -2 1401 204 85 53 chr17 10392657 10392973 -79111580 + MER63B DNA MER1_type 5 338 -724 2236 73 10 3 chr17 10392973 10393273 -79111280 - AluSq SINE Alu -11 302 1 1401 204 85 53 chr17 10393273 10393354 -79111199 + MER63B DNA MER1_type 338 415 -21 665 193 0 0 chr17 10393578 10393692 -79110861 + FLAM_C SINE Alu 6 119 -24 217 220 0 40 chr17 10394052 10394102 -79110451 + L2 LINE L2 3259 3306 -7 * 549 222 56 24 chr17 10394081 10394207 -79110346 - MER5B DNA MER1_type -46 132 3 252 0 0 0 chr17 10394573 10394601 -79109952 + (TG)n Simple_repeat Simple_repeat 1 28 0 37 29 0 43 chr17 10394761 10394831 -79109722 + AT_rich Low_complexity Low_complexity 1 67 0 722 242 104 15 chr17 10394859 10395119 -79109434 - L1MC4 LINE L1 -1 8041 7759 974 220 77 65 chr17 10395197 10395309 -79109244 - L1MC4a LINE L1 -1973 5835 5726 2503 55 0 3 chr17 10395309 10395618 -79108935 - AluY SINE Alu -3 308 1 974 220 77 65 chr17 10395618 10395828 -79108725 - L1MC4a LINE L1 -2082 5726 5509 1155 270 117 22 chr17 10396025 10396389 -79108164 + LTR16C LTR ERVL 1 416 -75 2008 116 3 13 chr17 10396389 10396700 -79107853 - AluSx SINE Alu -4 308 1 1155 270 117 22 chr17 10396700 10396780 -79107773 + LTR16C LTR ERVL 416 487 -4 336 278 158 23 chr17 10397361 10397494 -79107059 + L1MCa LINE L1 1793 1943 -4483 1049 226 19 36 chr17 10397541 10397759 -79106794 + L1MCa LINE L1 3085 3294 -3132 3327 62 0 5 chr17 10397759 10398180 -79106373 - L1PA8 LINE L1 0 6172 5754 1049 226 19 36 chr17 10398180 10398376 -79106177 + L1MCa LINE L1 3294 3492 -2934 282 143 0 0 chr17 10398483 10398546 -79106007 + (CAT)n Simple_repeat Simple_repeat 3 65 0 1262 242 50 50 chr17 10399110 10399647 -79104906 + L1MCa LINE L1 3477 4013 -2413 1482 121 13 121 chr17 10400346 10400659 -79103894 - Tigger7 DNA MER2_type -1 2586 2308 753 177 0 125 chr17 10400662 10400854 -79103699 - Tigger7 DNA MER2_type -562 171 4 355 233 29 105 chr17 10400917 10401089 -79103464 - MIR3 SINE MIR -11 197 39 263 278 213 35 chr17 10401106 10401275 -79103278 - MIR SINE MIR -17 245 47 639 206 15 121 chr17 10401315 10401514 -79103039 - MIR SINE MIR -46 216 39 205 343 14 0 chr17 10402019 10402089 -79102464 - L2 LINE L2 -73 3199 3129 196 277 12 84 chr17 10402289 10402372 -79102181 - MIR SINE MIR -41 221 145 554 310 26 47 chr17 10402400 10402632 -79101921 + MIR SINE MIR 31 257 -5 2119 99 3 0 chr17 10402632 10402924 -79101629 - AluSc SINE Alu -16 293 1 339 106 0 0 chr17 10402931 10402978 -79101575 - MIR SINE MIR -106 156 110 2267 145 0 6 chr17 10403574 10403919 -79100634 - MER2 DNA MER2_type -1 343 1 2431 249 90 23 chr17 10403959 10405016 -79099537 - L1M4 LINE L1 -2232 3914 2787 2100 110 0 13 chr17 10405216 10405342 -79099211 + AluSc SINE Alu 1 127 -182 201 74 0 0 chr17 10405342 10405369 -79099184 + (TA)n Simple_repeat Simple_repeat 1 27 0 2100 110 0 13 chr17 10405369 10405552 -79099001 + AluSc SINE Alu 127 306 -3 1512 189 73 25 chr17 10406080 10406434 -79098119 - MLT1A2 LTR MaLR 0 374 4 339 368 38 27 chr17 10406549 10406734 -79097819 + MIR3 SINE MIR 20 206 -2 378 270 50 115 chr17 10407150 10407405 -79097148 + L1MC4 LINE L1 5673 5819 -302 584 284 66 30 chr17 10408970 10409167 -79095386 - MIR SINE MIR -10 252 49 506 235 9 0 chr17 10409765 10409880 -79094673 - MER5B DNA MER1_type 0 178 63 629 221 153 18 chr17 10409904 10410067 -79094486 + MER5A DNA MER1_type 4 188 -1 328 144 114 111 chr17 10410082 10410178 -79094375 + MER5A DNA MER1_type 6 141 -48 1944 138 0 0 chr17 10410178 10410527 -79094026 - AluSx SINE Alu 0 312 1 328 144 114 111 chr17 10410527 10410577 -79093976 + MER5A DNA MER1_type 141 189 0 508 358 49 23 chr17 10410771 10411019 -79093534 + L2 LINE L2 2354 2619 -695 198 0 0 0 chr17 10411019 10411041 -79093512 + (TG)n Simple_repeat Simple_repeat 1 22 0 508 358 49 23 chr17 10411041 10411219 -79093334 + L2 LINE L2 2619 2791 -523 196 281 67 59 chr17 10411500 10411635 -79092918 + L3b LINE CR1 1277 1412 -171 437 216 128 8 chr17 10411848 10411973 -79092580 + MIR3 SINE MIR 20 159 -49 1186 160 9 61 chr17 10411974 10412205 -79092348 + MER20 DNA MER1_type 1 219 0 291 188 75 38 chr17 10412215 10412295 -79092258 + MER5B DNA MER1_type 17 99 -79 362 210 240 30 chr17 10412573 10412656 -79091897 + MLT1J2 LTR MaLR 274 383 -67 213 39 0 0 chr17 10412656 10412682 -79091871 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 362 210 240 30 chr17 10412682 10412698 -79091855 + MLT1J2 LTR MaLR 383 394 -56 248 374 0 0 chr17 10414427 10414518 -79090035 - L3b LINE CR1 -248 1335 1245 478 313 25 69 chr17 10414757 10415191 -79089362 + L2 LINE L2 2487 2901 -413 1578 215 67 29 chr17 10415204 10415433 -79089120 - MLT1F1 LTR MaLR -125 442 188 213 39 0 0 chr17 10415433 10415459 -79089094 + (GA)n Simple_repeat Simple_repeat 2 27 0 1578 215 67 29 chr17 10415459 10415647 -79088906 - MLT1F1 LTR MaLR -379 188 9 499 317 30 25 chr17 10415857 10416056 -79088497 + MIR SINE MIR 48 247 -15 264 59 0 0 chr17 10416078 10416112 -79088441 + (TAA)n Simple_repeat Simple_repeat 1 34 0 1618 141 87 0 chr17 10416789 10417065 -79087488 + AluJb SINE Alu 1 300 -12 2364 90 6 0 chr17 10417417 10417728 -79086825 - AluSq SINE Alu 0 313 1 458 326 109 0 chr17 10418348 10418569 -79085984 + L1M4 LINE L1 2581 2825 -3321 324 316 88 0 chr17 10418635 10418749 -79085804 - L2 LINE L2 -2 3270 3147 371 298 71 0 chr17 10419256 10419424 -79085129 + MARNA DNA Mariner 329 508 -78 747 238 138 0 chr17 10419839 10420028 -79084525 - MIR SINE MIR -36 226 12 300 321 0 0 chr17 10420058 10420139 -79084414 - Charlie8 DNA MER1_type -2332 85 5 271 224 35 17 chr17 10421208 10421266 -79083287 + MIR SINE MIR 91 149 -59 672 168 0 0 chr17 10421545 10421670 -79082883 + (TG)n Simple_repeat Simple_repeat 1 125 0 571 215 97 14 chr17 10421742 10421886 -79082667 - L1ME3A LINE L1 -9 6161 6006 2109 100 10 3 chr17 10421982 10422282 -79082271 - AluSc SINE Alu -7 302 1 438 256 26 8 chr17 10422298 10422415 -79082138 - L2 LINE L2 -1328 1986 1868 285 97 0 48 chr17 10422958 10423020 -79081533 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 2335 77 7 3 chr17 10423024 10423334 -79081219 - AluSq SINE Alu -2 311 1 287 294 55 60 chr17 10423805 10424006 -79080547 + MIR SINE MIR 32 231 -31 1472 167 10 61 chr17 10424290 10424453 -79080100 - AluJo SINE Alu -16 296 155 1727 139 0 77 chr17 10424453 10424776 -79079777 - AluSx SINE Alu -14 298 1 1472 167 10 61 chr17 10424776 10424924 -79079629 - AluJo SINE Alu -157 155 1 2120 93 0 7 chr17 10425221 10425511 -79079042 + AluSc SINE Alu 1 288 -21 1710 137 128 9 chr17 10425528 10425865 -79078688 + L1MB2 LINE L1 5795 6171 0 1813 57 0 25 chr17 10426126 10426400 -79078153 - L1PA8 LINE L1 0 6172 5929 783 151 0 8 chr17 10426400 10426526 -79078027 - FLAM_C SINE Alu -16 127 3 2077 112 3 0 chr17 10426737 10427031 -79077522 - AluSx SINE Alu -17 295 1 332 87 0 0 chr17 10427031 10427077 -79077476 - AluSq/x SINE Alu -168 135 90 743 270 98 14 chr17 10428256 10428332 -79076221 - MIR SINE MIR -27 235 167 2259 105 0 0 chr17 10428332 10428636 -79075917 + AluSx SINE Alu 1 304 -8 743 270 98 14 chr17 10428636 10428774 -79075779 - MIR SINE MIR -95 167 3 183 42 0 0 chr17 10428811 10428835 -79075718 + (TG)n Simple_repeat Simple_repeat 2 25 0 225 267 150 0 chr17 10428875 10428935 -79075618 - L2 LINE L2 -13 3300 3232 532 207 9 9 chr17 10429062 10429178 -79075375 + L1ME3A LINE L1 6046 6161 -9 300 111 0 0 chr17 10429375 10429420 -79075133 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 1954 105 17 10 chr17 10429423 10429717 -79074836 - AluSq SINE Alu -16 297 2 397 61 0 61 chr17 10429733 10429799 -79074754 + L1PA16 LINE L1 6103 6164 -2 2121 114 0 25 chr17 10430418 10430733 -79073820 - AluSx SINE Alu -1 311 5 21 0 0 0 chr17 10431070 10431091 -79073462 + AT_rich Low_complexity Low_complexity 1 21 0 717 272 39 15 chr17 10432025 10432231 -79072322 + MIR SINE MIR 1 211 -51 1022 117 13 0 chr17 10432320 10432474 -79072079 - AluSg/x SINE Alu -9 303 148 1310 195 44 41 chr17 10432933 10433146 -79071407 + MLT1A1 LTR MaLR 1 217 -148 1565 153 85 3 chr17 10433146 10433428 -79071125 + AluJo SINE Alu 1 305 -7 1310 195 44 41 chr17 10433428 10433557 -79070996 + MLT1A1 LTR MaLR 217 344 -21 192 309 29 0 chr17 10433969 10434037 -79070516 - MIR SINE MIR -42 220 151 431 279 53 21 chr17 10434220 10434410 -79070143 + MIR3 SINE MIR 8 203 -5 971 233 73 37 chr17 10434945 10435245 -79069308 - MLT1I LTR MaLR -1 408 98 556 210 156 27 chr17 10435640 10435826 -79068727 + MER63A DNA MER1_type 1 210 0 222 345 69 43 chr17 10435857 10435973 -79068580 + L2 LINE L2 3101 3219 -53 2232 139 43 114 chr17 10436236 10436753 -79067800 + LTR12 LTR ERV1 1 480 -234 198 182 0 0 chr17 10437560 10437593 -79066960 + MIR SINE MIR 73 105 -157 559 169 0 0 chr17 10438043 10438132 -79066421 - FLAM_A SINE Alu -49 93 5 392 303 103 9 chr17 10438640 10438817 -79065736 + MIR SINE MIR 47 249 -13 2711 167 53 46 chr17 10439660 10440186 -79064367 - LTR31 LTR ERV1 -15 604 75 2473 262 102 61 chr17 10440280 10441703 -79062850 - HAL1 LINE L1 -607 1900 420 291 233 56 11 chr17 10441923 10442013 -79062540 - HAL1 LINE L1 -2370 137 44 680 269 44 26 chr17 10442166 10442393 -79062160 + MIR SINE MIR 32 262 0 2180 112 0 0 chr17 10442644 10442947 -79061606 + AluSq SINE Alu 1 303 -10 259 281 61 26 chr17 10443070 10443184 -79061369 + MIR SINE MIR 86 203 -59 260 413 35 6 chr17 10443705 10443824 -79060729 - MER5B DNA MER1_type -1 177 50 1212 107 0 73 chr17 10443824 10444029 -79060524 - MER30B DNA MER1_type 0 190 1 260 413 35 6 chr17 10444029 10444081 -79060472 - MER5B DNA MER1_type -128 50 1 446 180 168 31 chr17 10444295 10444456 -79060097 - Charlie7 DNA MER1_type -5 2607 2425 598 217 17 0 chr17 10444725 10444840 -79059713 + FLAM_C SINE Alu 1 117 -16 21 0 0 0 chr17 10444840 10444861 -79059692 + AT_rich Low_complexity Low_complexity 1 21 0 229 229 73 42 chr17 10445675 10445771 -79058782 + Tigger3(Golem) DNA MER2_type 2218 2316 -713 2099 120 3 0 chr17 10446222 10446523 -79058030 - AluSp SINE Alu -11 302 1 1096 259 97 78 chr17 10446585 10447110 -79057443 - MER34 LTR ERV1 0 542 8 872 270 4 44 chr17 10447213 10447439 -79057114 - MIR SINE MIR 0 262 46 202 227 23 0 chr17 10447507 10447551 -79057002 + L2 LINE L2 3269 3313 0 1016 160 53 70 chr17 10447815 10447955 -79056598 + L1MD3 LINE L1 7756 7892 -103 2213 56 42 0 chr17 10447955 10448242 -79056311 + AluYa5 SINE Alu 2 300 -11 1016 160 53 70 chr17 10448242 10448345 -79056208 + L1MD3 LINE L1 7892 7995 0 923 251 97 28 chr17 10448444 10448763 -79055790 - MER102b DNA MER1_type 0 341 1 321 304 5 98 chr17 10449415 10449479 -79055074 - MER5B DNA MER1_type 0 178 110 1380 188 53 18 chr17 10449479 10449601 -79054952 + AluJo SINE Alu 1 117 -195 797 0 11 0 chr17 10449601 10449694 -79054859 + (TAAAA)n Simple_repeat Simple_repeat 5 98 0 1380 188 53 18 chr17 10449694 10449853 -79054700 + AluJo SINE Alu 117 292 -20 321 304 5 98 chr17 10449853 10449982 -79054571 - MER5B DNA MER1_type -68 110 3 230 273 115 18 chr17 10450198 10450311 -79054242 + MIR SINE MIR 30 153 -93 295 227 172 62 chr17 10450490 10450618 -79053935 - L2 LINE L2 0 3313 3172 482 233 169 97 chr17 10451391 10451725 -79052828 - MLT1G LTR MaLR -41 549 168 2685 3 0 0 chr17 10451725 10452022 -79052531 - AluYa5 SINE Alu -10 301 5 482 233 169 97 chr17 10452022 10452182 -79052371 - MLT1G LTR MaLR -422 168 21 289 294 100 48 chr17 10452286 10452555 -79051998 + L1M4 LINE L1 15 297 -6245 3079 237 53 73 chr17 10452705 10454611 -79049942 + L1M4 LINE L1 533 2555 -4270 413 261 163 38 chr17 10454628 10454812 -79049741 - MIR SINE MIR -54 208 2 314 254 0 0 chr17 10455428 10455495 -79049058 - MLT1G1 LTR MaLR 0 555 489 1161 112 0 6 chr17 10455495 10455720 -79048833 - AluSp SINE Alu 0 341 118 801 239 77 107 chr17 10455731 10456162 -79048391 - MLT1G1 LTR MaLR -113 454 37 1963 96 11 4 chr17 10457592 10457898 -79046655 + AluSq SINE Alu 1 308 0 293 377 27 6 chr17 10458580 10458754 -79045799 + MIR SINE MIR 9 184 -61 2074 129 0 16 chr17 10458803 10459113 -79045440 - AluSx SINE Alu -7 305 1 225 250 0 0 chr17 10459355 10459403 -79045150 + L2 LINE L2 3196 3243 -70 372 315 108 14 chr17 10459403 10459663 -79044890 + L2 LINE L2 2969 3308 -5 348 333 86 12 chr17 10460432 10460594 -79043959 - MER5A DNA MER1_type -15 174 1 397 198 105 0 chr17 10461455 10461541 -79043012 + MER53 DNA DNA 1 95 -94 313 185 99 12 chr17 10461471 10461552 -79043001 - MER53 DNA DNA -7 182 95 * 741 226 145 47 chr17 10461623 10462003 -79042550 - MER96B DNA MER1_type 0 417 1 228 240 27 53 chr17 10462179 10462254 -79042299 + L2 LINE L2 3194 3266 -6 481 213 27 53 chr17 10462748 10462787 -79041766 - MER5B DNA MER1_type -1 177 138 2039 110 3 19 chr17 10462787 10463104 -79041449 - AluSx SINE Alu 0 312 1 481 213 27 53 chr17 10463104 10463214 -79041339 - MER5B DNA MER1_type -40 138 32 4457 172 63 21 chr17 10463215 10463269 -79041284 - L1MB3 LINE L1 0 6183 6133 2213 93 3 0 chr17 10463269 10463570 -79040983 - AluSx SINE Alu -10 302 1 4457 172 63 21 chr17 10463570 10464546 -79040007 - L1MB3 LINE L1 -50 6133 5107 194 279 0 0 chr17 10464552 10464595 -79039958 - MER5B DNA MER1_type -130 48 6 208 261 0 62 chr17 10465330 10465395 -79039158 - MIR SINE MIR -60 148 88 1544 300 42 15 chr17 10465425 10465951 -79038602 + MLT1K LTR MaLR 41 580 -8 194 245 19 0 chr17 10466572 10466625 -79037928 + MIR SINE MIR 101 154 -108 268 265 48 12 chr17 10467014 10467097 -79037456 + MIR SINE MIR 66 151 -57 495 333 111 44 chr17 10467121 10467987 -79036566 + L2 LINE L2 2328 3238 -34 324 120 0 0 chr17 10468329 10468379 -79036174 + (TG)n Simple_repeat Simple_repeat 1 50 0 283 157 0 20 chr17 10469500 10469551 -79035002 + L2 LINE L2 3261 3310 -3 507 237 114 0 chr17 10470013 10470144 -79034409 + MER96 DNA MER1_type? 3 148 -27 248 229 93 73 chr17 10470365 10470570 -79033983 + Charlie8 DNA MER1_type 117 1415 -1002 606 291 44 60 chr17 10470602 10471035 -79033518 + LTR16B LTR ERVL 36 461 -3 1363 214 4 4 chr17 10471510 10471791 -79032762 + L1 LINE L1 4958 5238 -908 401 250 0 20 chr17 10472164 10472264 -79032289 - MIR SINE MIR -88 120 23 375 207 43 24 chr17 10472336 10472500 -79032053 + CT-rich Low_complexity Low_complexity 3 169 0 616 240 139 35 chr17 10472948 10473062 -79031491 + L1ME4a LINE L1 5715 5816 -305 2308 76 31 0 chr17 10473062 10473350 -79031203 + AluSq SINE Alu 1 297 -16 616 240 139 35 chr17 10473350 10473601 -79030952 + L1ME4a LINE L1 5816 6118 -3 277 95 0 0 chr17 10473621 10473663 -79030890 + MADE1 DNA Mariner 3 44 -36 3138 156 44 29 chr17 10474019 10474304 -79030249 - MER7C DNA MER2_type -2427 601 322 2361 102 0 7 chr17 10474304 10474609 -79029944 + AluSx SINE Alu 1 303 -9 3138 156 44 29 chr17 10474609 10474913 -79029640 - MER7C DNA MER2_type -2706 322 3 462 248 35 9 chr17 10475957 10476070 -79028483 + MIR SINE MIR 5 120 -142 399 218 65 17 chr17 10476086 10476314 -79028239 + L2 LINE L2 2997 3310 -3 287 292 106 0 chr17 10476309 10476422 -79028131 + MIR SINE MIR 138 262 0 * 450 267 18 61 chr17 10476549 10476640 -79027913 - Charlie8 DNA MER1_type -175 166 84 2275 96 3 7 chr17 10476640 10476941 -79027612 + AluSg SINE Alu 11 310 0 450 267 18 61 chr17 10476941 10477014 -79027539 - Charlie8 DNA MER1_type -257 84 9 1663 111 40 28 chr17 10477357 10477610 -79026943 - AluSx SINE Alu -22 290 35 2296 117 3 0 chr17 10477872 10478179 -79026374 - AluSg SINE Alu 0 310 3 808 271 92 0 chr17 10479327 10479589 -79024964 + L2 LINE L2 2383 2668 -646 736 281 242 10 chr17 10479875 10480263 -79024290 + L2 LINE L2 2836 3313 0 2086 117 0 0 chr17 10480269 10480542 -79024011 + AluSx SINE Alu 1 273 -39 180 0 0 0 chr17 10480542 10480562 -79023991 + (TC)n Simple_repeat Simple_repeat 2 21 0 205 274 0 16 chr17 10481561 10481623 -79022930 - MIR SINE MIR -61 147 87 180 298 24 24 chr17 10482700 10482784 -79021769 - MIR3 SINE MIR -35 173 90 942 230 123 14 chr17 10483175 10483532 -79021021 + L1ME2 LINE L1 5760 6155 -9 2281 101 0 0 chr17 10484584 10484872 -79019681 - AluY SINE Alu -23 288 1 415 301 27 60 chr17 10488657 10488840 -79015713 - MIR SINE MIR -35 227 51 225 313 0 0 chr17 10489758 10489822 -79014731 - MIR SINE MIR -163 99 36 423 0 0 0 chr17 10490317 10490364 -79014189 + (TG)n Simple_repeat Simple_repeat 2 48 0 189 0 0 0 chr17 10490530 10490551 -79014002 + (TG)n Simple_repeat Simple_repeat 1 21 0 284 326 10 0 chr17 10490884 10490982 -79013571 + MER5A DNA MER1_type 11 109 -80 2194 82 0 0 chr17 10491497 10491765 -79012788 - AluSg SINE Alu -5 305 38 759 233 18 54 chr17 10491974 10492025 -79012528 + MIR SINE MIR 5 56 -206 2647 43 0 0 chr17 10492025 10492324 -79012229 + AluY SINE Alu 1 299 -12 759 233 18 54 chr17 10492324 10492495 -79012058 + MIR SINE MIR 56 219 -43 348 64 0 0 chr17 10492530 10492577 -79011976 + (ATG)n Simple_repeat Simple_repeat 2 48 0 420 299 108 5 chr17 10492687 10492901 -79011652 + MIR SINE MIR 8 243 -19 2391 107 0 0 chr17 10493244 10493554 -79010999 - AluSg SINE Alu 0 310 1 188 119 0 24 chr17 10493565 10493607 -79010946 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 211 278 0 0 chr17 10493692 10493764 -79010789 + A-rich Low_complexity Low_complexity 1 72 0 512 288 128 44 chr17 10493839 10494405 -79010148 + L1MC4a LINE L1 5320 5819 -302 1770 163 17 10 chr17 10494530 10494819 -79009734 - AluJo SINE Alu -21 291 1 22 35 0 0 chr17 10494825 10494854 -79009699 + AT_rich Low_complexity Low_complexity 1 29 0 387 125 8 125 chr17 10497427 10497514 -79007039 - L1MA8 LINE L1 -22 6269 6198 2180 95 58 0 chr17 10497514 10497634 -79006919 + AluSx SINE Alu 1 113 -199 420 20 0 0 chr17 10497634 10497683 -79006870 + (CA)n Simple_repeat Simple_repeat 2 50 0 2180 95 58 0 chr17 10497683 10497857 -79006696 + AluSx SINE Alu 113 312 0 387 125 8 125 chr17 10497857 10497889 -79006664 - L1MA8 LINE L1 -93 6198 6164 299 319 87 36 chr17 10497914 10498052 -79006501 + L2 LINE L2 3125 3269 -3 184 301 205 0 chr17 10498083 10498166 -79006387 - L2 LINE L2 -19 3253 3154 2414 48 0 34 chr17 10498443 10498769 -79005784 - AluY SINE Alu 0 316 1 282 319 88 9 chr17 10499574 10499687 -79004866 - MER5A DNA MER1_type -1 188 67 2445 85 0 10 chr17 10499816 10500123 -79004430 - AluY SINE Alu -6 305 2 611 245 80 11 chr17 10500389 10500577 -79003976 - MER112 DNA MER1_type 0 260 60 537 270 15 7 chr17 10500662 10500799 -79003754 - MIR3 SINE MIR -41 167 30 2502 81 0 0 chr17 10502542 10502840 -79001713 - AluSc SINE Alu -11 298 1 346 211 77 67 chr17 10503085 10503189 -79001364 - L2 LINE L2 -1 3271 3167 2227 96 0 0 chr17 10503238 10503571 -79000982 + AluY SINE Alu 1 333 0 1337 182 128 66 chr17 10503756 10503908 -79000645 - MER63B DNA MER1_type -630 432 291 1906 166 0 16 chr17 10503908 10504221 -79000332 + AluJo SINE Alu 1 308 -4 1337 182 128 66 chr17 10504221 10504475 -79000078 - MER63B DNA MER1_type -771 291 1 2057 131 6 38 chr17 10505075 10505395 -78999158 - AluSx SINE Alu -2 310 1 556 287 76 9 chr17 10506308 10506531 -78998022 + L1M4 LINE L1 4793 5030 -1116 223 250 10 104 chr17 10508154 10508250 -78996303 + L3 LINE CR1 1491 1577 0 3287 153 6 65 chr17 10508255 10508405 -78996148 - L1MB5 LINE L1 0 6174 6017 1459 187 35 81 chr17 10508405 10508572 -78995981 + MLT1B LTR MaLR 4 177 -213 1734 112 138 11 chr17 10508572 10508841 -78995712 + AluSg SINE Alu 1 303 -7 1459 187 35 81 chr17 10508841 10509079 -78995474 + MLT1B LTR MaLR 177 390 0 3287 153 6 65 chr17 10509079 10509621 -78994932 - L1MB5 LINE L1 -157 6017 5523 2310 86 3 0 chr17 10509962 10510254 -78994299 - AluSg SINE Alu -17 293 1 282 204 0 0 chr17 10510685 10510734 -78993819 + L2 LINE L2 3265 3313 0 188 259 0 69 chr17 10510720 10510778 -78993775 + MIR SINE MIR 91 144 -118 * 250 167 0 0 chr17 10512186 10512228 -78992325 + 5S rRNA rRNA 1 42 -79 2283 116 0 3 chr17 10512318 10512621 -78991932 + AluSx SINE Alu 1 302 -10 245 246 0 14 chr17 10512673 10512742 -78991811 + (TG)n Simple_repeat Simple_repeat 1 68 0 845 243 66 12 chr17 10513086 10513345 -78991208 - Charlie8 DNA MER1_type -2141 276 4 22 35 0 0 chr17 10513394 10513423 -78991130 + GC_rich Low_complexity Low_complexity 1 29 0 513 264 50 28 chr17 10514160 10514342 -78990211 + MIR SINE MIR 75 260 -2 23 68 0 0 chr17 10514426 10514470 -78990083 + AT_rich Low_complexity Low_complexity 1 44 0 186 294 206 0 chr17 10514743 10514869 -78989684 + MIR3 SINE MIR 46 197 -11 296 367 42 0 chr17 10515651 10515771 -78988782 + L2 LINE L2 2707 2831 -483 2071 116 0 50 chr17 10516036 10516339 -78988214 + AluSx SINE Alu 1 288 -24 439 160 13 0 chr17 10516412 10516487 -78988066 - L1MB7 LINE L1 -54 6130 6055 734 171 0 46 chr17 10516588 10516763 -78987790 - L1MB3 LINE L1 0 6183 6017 369 277 61 7 chr17 10516780 10516928 -78987625 - MIR3 SINE MIR -6 202 47 597 307 60 52 chr17 10517491 10517810 -78986743 + L1ME4a LINE L1 5514 5838 -283 2146 87 3 62 chr17 10517810 10518131 -78986422 + AluSp SINE Alu 1 302 -11 597 307 60 52 chr17 10518131 10518192 -78986361 + L1ME4a LINE L1 5838 5897 -224 1859 152 56 9 chr17 10518234 10518576 -78985977 + Tigger2 DNA MER2_type 2361 2718 0 2410 95 0 0 chr17 10518750 10519045 -78985508 + AluSg SINE Alu 1 295 -15 586 248 56 87 chr17 10519557 10519823 -78984730 - Charlie8 DNA MER1_type -2159 258 1 619 161 0 15 chr17 10520089 10520219 -78984334 + CT-rich Low_complexity Low_complexity 1 128 0 2140 120 3 7 chr17 10520219 10520511 -78984042 - AluSx SINE Alu -21 291 1 1754 174 14 17 chr17 10520572 10520860 -78983693 + AluJb SINE Alu 1 287 -25 2316 96 0 0 chr17 10520923 10521215 -78983338 + AluSg SINE Alu 1 292 -18 2504 76 3 13 chr17 10521822 10522137 -78982416 + AluSp SINE Alu 1 312 -1 493 158 278 0 chr17 10522459 10522592 -78981961 - MER5A DNA MER1_type -16 173 4 3845 97 3 15 chr17 10522712 10522739 -78981814 + L1PA13 LINE L1 5320 5346 -817 2476 86 0 3 chr17 10522739 10523040 -78981513 - AluSq SINE Alu -13 300 1 3845 97 3 15 chr17 10523040 10523600 -78980953 + L1PA13 LINE L1 5346 5900 -263 381 237 111 31 chr17 10523803 10523962 -78980591 - MIR SINE MIR -20 242 64 273 329 36 29 chr17 10524106 10524243 -78980310 + L2 LINE L2 3165 3302 -11 1109 177 13 44 chr17 10524928 10525154 -78979399 + MER20 DNA MER1_type 1 219 0 322 219 178 11 chr17 10525324 10525464 -78979089 - MIR3 SINE MIR -49 159 1 1200 187 9 27 chr17 10525758 10525983 -78978570 - MIR SINE MIR -31 231 11 329 217 87 11 chr17 10527367 10527459 -78977094 + MIR SINE MIR 30 128 -80 242 338 30 38 chr17 10527472 10527605 -78976948 - MER5A DNA MER1_type -6 183 52 373 204 135 9 chr17 10528223 10528340 -78976213 + MIR SINE MIR 18 149 -68 641 251 100 56 chr17 10528349 10528580 -78975973 - MIR SINE MIR -20 242 2 2349 112 0 0 chr17 10530527 10530830 -78973723 - AluSx SINE Alu -9 303 1 319 261 50 50 chr17 10531209 10531287 -78973266 + MIR SINE MIR 74 151 -111 301 292 23 46 chr17 10531287 10531417 -78973136 - MER5A DNA MER1_type 0 189 63 478 285 85 28 chr17 10531980 10532213 -78972340 - MIR SINE MIR -14 248 6 690 240 167 17 chr17 10532557 10532580 -78971973 + L1MC4 LINE L1 6683 6701 -1341 278 49 0 24 chr17 10532580 10532621 -78971932 + (CA)n Simple_repeat Simple_repeat 2 41 0 690 240 167 17 chr17 10532621 10532884 -78971669 + L1MC4 LINE L1 6701 7012 -1030 515 289 44 42 chr17 10532888 10533465 -78971088 + L1MD3 LINE L1 7074 7749 -246 * 1559 146 134 12 chr17 10533460 10533803 -78970750 + L1MB8 LINE L1 5784 6168 -10 744 222 21 7 chr17 10533928 10534072 -78970481 + FRAM SINE Alu 1 146 -30 449 244 88 66 chr17 10534075 10534420 -78970133 + L1MC5 LINE L1 7603 7917 -44 426 271 134 71 chr17 10534699 10535206 -78969347 + L2 LINE L2 2730 3270 -2 4321 69 21 0 chr17 10535468 10536033 -78968520 + L1PA8 LINE L1 5596 6172 0 2554 59 0 0 chr17 10536335 10536638 -78967915 - AluY SINE Alu -8 303 1 195 293 158 37 chr17 10536704 10536786 -78967767 + MIR SINE MIR 19 110 -98 771 210 0 36 chr17 10537053 10537220 -78967333 + FAM SINE Alu 1 161 -14 21 36 0 0 chr17 10537513 10537541 -78967012 + AT_rich Low_complexity Low_complexity 1 28 0 247 185 99 12 chr17 10537553 10537634 -78966919 - L1ME4a LINE L1 -13 6108 6021 714 237 40 6 chr17 10537637 10537814 -78966739 - MER20 DNA MER1_type 0 219 37 671 287 62 29 chr17 10537823 10538164 -78966389 - L1ME4a LINE L1 -90 6031 5680 462 305 24 42 chr17 10538658 10538825 -78965728 + MER5A DNA MER1_type 17 180 -9 296 164 0 14 chr17 10539145 10539218 -78965335 + (CAT)n Simple_repeat Simple_repeat 3 74 0 2218 92 0 7 chr17 10540688 10540971 -78963582 + AluSq SINE Alu 1 281 -32 230 0 33 0 chr17 10540973 10541003 -78963550 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 330 286 20 0 chr17 10541087 10541185 -78963368 + MER63 DNA MER1_type 27 752 -84 300 300 31 71 chr17 10541220 10541398 -78963155 + MIR SINE MIR 32 198 -62 901 117 0 36 chr17 10541455 10541592 -78962961 + FLAM_C SINE Alu 1 132 -1 1580 177 10 31 chr17 10541619 10541913 -78962640 + AluJb SINE Alu 1 288 -24 251 295 37 69 chr17 10542962 10543454 -78961099 + L1M4 LINE L1 2703 3178 -2968 2415 72 3 0 chr17 10543597 10543888 -78960665 - AluSx SINE Alu -14 298 7 2111 112 10 3 chr17 10545413 10545717 -78958836 + AluSq SINE Alu 1 306 -7 272 235 23 15 chr17 10545763 10545895 -78958658 + CT-rich Low_complexity Low_complexity 1 133 0 1011 228 37 0 chr17 10547285 10547526 -78957027 + L1MD3 LINE L1 7723 7972 -23 639 241 14 0 chr17 10547543 10547688 -78956865 - MER3 DNA MER1_type -62 147 1 1825 178 7 10 chr17 10548271 10548569 -78955984 + AluJb SINE Alu 1 297 -15 224 284 45 0 chr17 10548612 10548679 -78955874 - MIR3 SINE MIR -54 154 85 1396 168 40 94 chr17 10548728 10549025 -78955528 + AluJb SINE Alu 9 289 -23 323 213 12 38 chr17 10549030 10549110 -78955443 - HsTC2 DNA Tc2 -1813 85 8 1076 168 20 5 chr17 10549220 10549417 -78955136 - MER20 DNA MER1_type -2 217 18 280 242 0 0 chr17 10549481 10549543 -78955010 + MER103 DNA DNA 39 100 -66 39 0 0 0 chr17 10550395 10550434 -78954119 + AT_rich Low_complexity Low_complexity 1 39 0 293 250 33 0 chr17 10550610 10550702 -78953851 - HAL1b LINE L1 -428 920 826 445 295 68 53 chr17 10551007 10551214 -78953339 - L2 LINE L2 -41 3231 3022 409 304 138 12 chr17 10551276 10551350 -78953203 - L3 LINE CR1 -10 1567 1504 2101 142 3 0 chr17 10551350 10551660 -78952893 + AluSx SINE Alu 1 311 -1 409 304 138 12 chr17 10551660 10551825 -78952728 - L3 LINE CR1 -73 1504 1298 2261 92 3 0 chr17 10552835 10553235 -78951318 + AluSx SINE Alu 1 401 0 376 236 71 11 chr17 10553316 10553471 -78951082 - HAL1b LINE L1 -4 6117 1194 1960 160 0 3 chr17 10553550 10553843 -78950710 + AluJb SINE Alu 3 294 -18 2256 116 3 3 chr17 10553845 10554155 -78950398 + AluSx SINE Alu 1 310 -2 589 238 33 55 chr17 10554191 10554372 -78950181 + MIR SINE MIR 2 178 -84 422 308 14 28 chr17 10554503 10554646 -78949907 + MIR3 SINE MIR 45 185 -23 476 313 48 6 chr17 10554965 10555131 -78949422 + MIR SINE MIR 69 241 -21 612 248 130 36 chr17 10555974 10556305 -78948248 + LTR16A LTR ERVL 83 444 -6 198 0 0 0 chr17 10557224 10557246 -78947307 + (CAGGC)n Simple_repeat Simple_repeat 4 25 0 698 175 75 0 chr17 10557846 10557966 -78946587 + FLAM_A SINE Alu 1 129 -4 26 0 0 0 chr17 10558069 10558095 -78946458 + AT_rich Low_complexity Low_complexity 1 26 0 853 114 0 0 chr17 10558924 10559038 -78945515 + AluSg/x SINE Alu 180 293 -19 240 236 28 28 chr17 10559154 10559185 -78945368 - MIR SINE MIR -82 180 150 2262 76 48 3 chr17 10559185 10559475 -78945078 - AluY SINE Alu -8 303 1 240 236 28 28 chr17 10559475 10559515 -78945038 - MIR SINE MIR -111 151 109 470 217 58 25 chr17 10559681 10559801 -78944752 - L2 LINE L2 -2 3311 3188 825 277 84 28 chr17 10559931 10560098 -78944455 - L2 LINE L2 -126 3187 3031 1670 246 87 12 chr17 10560098 10560328 -78944225 - MLT1F LTR MaLR 0 542 331 2561 69 0 0 chr17 10560328 10560633 -78943920 + AluY SINE Alu 1 305 -6 1670 246 87 12 chr17 10560633 10560906 -78943647 - MLT1F LTR MaLR -211 331 1 825 277 84 28 chr17 10560906 10561095 -78943458 - L2 LINE L2 -282 3031 2811 410 196 10 8 chr17 10561109 10561213 -78943340 + MER5A DNA MER1_type 1 185 -4 372 290 117 42 chr17 10561214 10561428 -78943125 + MIR SINE MIR 14 243 -19 232 305 30 73 chr17 10562272 10562436 -78942117 + MER5A DNA MER1_type 3 159 -30 * 322 291 58 29 chr17 10562297 10562452 -78942101 - MER5A DNA MER1_type -6 172 7 38 22 0 0 chr17 10562903 10562948 -78941605 + AT_rich Low_complexity Low_complexity 1 45 0 7168 17 0 0 chr17 10562948 10563788 -78940765 - L1PA3 LINE L1 -4 6151 5312 * 11628 26 1 1 chr17 10563779 10565203 -78939350 + L1PA3 LINE L1 3899 5323 -823 438 274 20 68 chr17 10565819 10565965 -78938588 + L1MC/D LINE L1 5318 5456 -2352 312 288 194 29 chr17 10566040 10566210 -78938343 + L1MC/D LINE L1 5564 5761 -2047 3953 40 22 4 chr17 10566425 10566920 -78937633 + L1PA4 LINE L1 5652 6155 0 219 220 0 0 chr17 10566924 10566974 -78937579 + (TA)n Simple_repeat Simple_repeat 1 50 0 2437 88 0 3 chr17 10566974 10567280 -78937273 - AluSx SINE Alu -7 305 1 389 279 153 87 chr17 10567338 10567796 -78936757 + L1M4 LINE L1 4762 5249 -897 4081 198 62 5 chr17 10567800 10568613 -78935940 - MER21B LTR ERV1 -1 862 4 657 121 30 68 chr17 10568845 10568977 -78935576 + FLAM_C SINE Alu 17 143 0 188 188 42 0 chr17 10569018 10569066 -78935487 + GA-rich Low_complexity Low_complexity 5 54 0 2266 122 0 0 chr17 10569576 10569871 -78934682 + AluSx SINE Alu 1 295 -17 352 164 33 0 chr17 10570328 10570389 -78934164 - MER5A DNA MER1_type -1 188 126 1061 169 0 0 chr17 10570492 10570658 -78933895 - MER5A DNA MER1_type -23 166 1 313 233 67 8 chr17 10571649 10571769 -78932784 - L1ME4a LINE L1 0 6121 5995 239 237 102 0 chr17 10571912 10571971 -78932582 - MIR3 SINE MIR -22 186 122 1585 184 103 56 chr17 10572426 10572751 -78931802 - MLT1C LTR MaLR 0 467 114 4938 42 0 0 chr17 10572751 10573330 -78931223 - L1PA5 LINE L1 0 6154 5576 1585 184 103 56 chr17 10573330 10573450 -78931103 - MLT1C LTR MaLR -353 114 1 2205 98 0 0 chr17 10575070 10575345 -78929208 + AluSg SINE Alu 1 275 -35 192 40 0 0 chr17 10575346 10575371 -78929182 + (TC)n Simple_repeat Simple_repeat 2 26 0 450 293 0 0 chr17 10575375 10575542 -78929011 + (CATG)n Simple_repeat Simple_repeat 2 168 0 274 259 0 0 chr17 10575542 10575596 -78928957 + (TG)n Simple_repeat Simple_repeat 1 54 0 321 250 14 0 chr17 10575604 10575676 -78928877 - L1MCa LINE L1 -4358 2068 1996 * 339 211 56 0 chr17 10575649 10575720 -78928833 - L1MC4 LINE L1 -1339 6983 6909 486 279 32 7 chr17 10575868 10576022 -78928531 - Charlie8 DNA MER1_type -2206 211 54 180 333 0 0 chr17 10576553 10576601 -78927952 + L2 LINE L2 3189 3236 -77 2705 55 0 0 chr17 10576658 10576969 -78927584 - AluY SINE Alu 0 311 1 2423 84 3 6 chr17 10577683 10577994 -78926559 + AluSx SINE Alu 1 310 -2 2648 183 34 21 chr17 10578051 10578610 -78925943 - L1MB7 LINE L1 0 6184 5619 204 125 0 0 chr17 10579126 10579158 -78925395 + (CA)n Simple_repeat Simple_repeat 1 32 0 2754 3 7 3 chr17 10579379 10579677 -78924876 + AluYa5 SINE Alu 1 299 -12 894 135 14 14 chr17 10579900 10580041 -78924512 + FLAM_C SINE Alu 3 143 0 479 253 0 0 chr17 10580064 10580147 -78924406 + AluJb SINE Alu 135 217 -95 25 0 0 0 chr17 10580148 10580173 -78924380 + AT_rich Low_complexity Low_complexity 1 25 0 258 372 9 18 chr17 10580366 10580479 -78924074 + MIR SINE MIR 40 151 -57 2384 77 0 10 chr17 10580482 10580792 -78923761 - AluY SINE Alu -4 307 1 435 193 12 0 chr17 10580810 10580892 -78923661 - MER58A DNA MER1_type 0 224 142 1353 168 8 0 chr17 10580892 10581136 -78923417 - Tigger5 DNA MER2_type 0 2323 2078 346 181 108 12 chr17 10581132 10581215 -78923338 - Tigger5 DNA MER2_type -2232 91 1 * 724 199 7 27 chr17 10581215 10581361 -78923192 - MER58A DNA MER1_type 0 143 1 2498 70 7 0 chr17 10582035 10582335 -78922218 + AluSp SINE Alu 1 302 -11 2084 142 3 0 chr17 10582624 10582927 -78921626 - AluJb SINE Alu -8 304 1 1597 198 39 36 chr17 10583015 10583161 -78921392 + MLT1A1 LTR MaLR 6 150 -215 2477 81 0 3 chr17 10583161 10583471 -78921082 + AluY SINE Alu 1 309 -2 1597 198 39 36 chr17 10583471 10583683 -78920870 + MLT1A1 LTR MaLR 150 365 0 273 365 60 35 chr17 10584959 10585159 -78919394 + L2 LINE L2 3030 3234 -38 2195 92 0 7 chr17 10585213 10585522 -78919031 + AluSc SINE Alu 1 307 0 408 290 57 73 chr17 10586170 10586415 -78918138 + L2 LINE L2 3030 3270 -2 2537 63 0 0 chr17 10586444 10586744 -78917809 + AluY SINE Alu 1 300 -11 1455 143 39 130 chr17 10586835 10586995 -78917558 + AluJb SINE Alu 1 121 -191 1689 160 32 11 chr17 10586995 10587092 -78917461 + AluJb SINE Alu 24 117 -195 414 0 0 0 chr17 10587092 10587138 -78917415 + (TAA)n Simple_repeat Simple_repeat 2 47 0 1689 160 32 11 chr17 10587138 10587322 -78917231 + AluJb SINE Alu 117 311 -1 1455 143 39 130 chr17 10587322 10587469 -78917084 + AluJb SINE Alu 121 280 -32 435 19 0 0 chr17 10587469 10587521 -78917032 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 2332 88 3 13 chr17 10587664 10587969 -78916584 - AluSx SINE Alu -10 302 1 1084 239 4 0 chr17 10587969 10588195 -78916358 + MER58B DNA MER1_type 115 341 0 357 347 75 6 chr17 10588324 10588497 -78916056 + L1MC4a LINE L1 5749 5933 -1875 2346 105 0 3 chr17 10590970 10591283 -78913270 + AluSx SINE Alu 1 312 0 255 281 37 0 chr17 10591302 10591384 -78913169 + L1ME4a LINE L1 6009 6093 -28 207 204 0 0 chr17 10592163 10592207 -78912346 + (CGTG)n Simple_repeat Simple_repeat 1 44 0 1983 145 17 3 chr17 10592316 10592613 -78911940 + AluJo SINE Alu 1 301 -11 203 343 96 30 chr17 10592851 10593049 -78911504 + MIR SINE MIR 40 250 -12 2115 196 86 10 chr17 10593675 10594174 -78910379 + L1MB5 LINE L1 5638 6174 0 2431 109 0 0 chr17 10594182 10594494 -78910059 + AluSx SINE Alu 1 312 0 332 269 141 51 chr17 10594917 10595073 -78909480 - MER91A DNA MER1_type -18 178 9 407 300 67 33 chr17 10595250 10595430 -78909123 - MIR SINE MIR -1 261 76 789 163 0 8 chr17 10595466 10595584 -78908969 + FLAM_C SINE Alu 6 123 -16 198 0 0 0 chr17 10595584 10595606 -78908947 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 275 174 81 70 chr17 10595994 10596080 -78908473 + MER5A DNA MER1_type 1 87 -102 182 282 90 51 chr17 10597485 10597563 -78906990 + L2 LINE L2 3153 3233 -39 393 22 0 0 chr17 10597563 10597609 -78906944 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 939 199 49 135 chr17 10597764 10598091 -78906462 + MLT1A1 LTR MaLR 1 292 -73 1221 163 65 108 chr17 10598091 10598219 -78906334 + AluJo SINE Alu 1 133 -179 2281 86 6 65 chr17 10598219 10598543 -78906010 - AluSc SINE Alu -4 305 1 1221 163 65 108 chr17 10598543 10598720 -78905833 + AluJo SINE Alu 133 293 -19 939 199 49 135 chr17 10598720 10598778 -78905775 + MLT1A1 LTR MaLR 292 353 -12 301 267 139 64 chr17 10598908 10599110 -78905443 + HAL1 LINE L1 945 1161 -1346 260 320 135 36 chr17 10599414 10599777 -78904776 + HAL1b LINE L1 309 707 -641 1879 180 7 0 chr17 10599912 10600217 -78904336 + AluSx SINE Alu 1 307 -5 372 191 176 37 chr17 10602780 10602916 -78901637 + MIR3 SINE MIR 20 174 -34 426 269 90 28 chr17 10604474 10604619 -78899934 + MIR3 SINE MIR 23 176 -32 2318 91 7 0 chr17 10604653 10604949 -78899604 - AluSx SINE Alu -14 298 1 375 290 219 0 chr17 10605630 10605785 -78898768 + MER5A DNA MER1_type 1 189 0 210 245 0 20 chr17 10607305 10607354 -78897199 + (CCCCAG)n Simple_repeat Simple_repeat 2 49 0 443 266 104 72 chr17 10607932 10608154 -78896399 + MIR SINE MIR 34 262 0 2064 156 84 57 chr17 10608217 10608416 -78896137 + L1MB3 LINE L1 5286 5478 -702 1958 143 31 3 chr17 10608416 10608710 -78895843 + AluSx SINE Alu 1 302 -10 2064 156 84 57 chr17 10608710 10609036 -78895517 + L1MB3 LINE L1 5478 5825 -355 1446 81 0 0 chr17 10609036 10609209 -78895344 - AluSg/x SINE Alu -8 302 130 1727 208 6 8 chr17 10609209 10609575 -78894978 + L1MB3 LINE L1 5819 6183 0 2218 128 0 3 chr17 10609740 10610044 -78894509 + AluSx SINE Alu 1 303 -9 477 264 29 21 chr17 10610397 10610537 -78894016 - MIR SINE MIR -16 246 106 2249 123 7 0 chr17 10611220 10611530 -78893023 + AluSx SINE Alu 1 312 0 2281 121 7 0 chr17 10612355 10612661 -78891892 + AluSg SINE Alu 1 308 -2 1170 170 33 37 chr17 10613732 10613973 -78890580 - Tigger2 DNA MER2_type -10 2708 2469 1671 147 12 78 chr17 10613973 10614307 -78890246 + AluJb SINE Alu 1 312 0 3805 165 42 8 chr17 10614377 10615098 -78889455 - Tigger2 DNA MER2_type -1973 745 1 2244 83 45 0 chr17 10615113 10615401 -78889152 + AluY SINE Alu 1 301 -10 2330 103 0 0 chr17 10615755 10616045 -78888508 + AluSx SINE Alu 1 290 -22 270 247 10 41 chr17 10616144 10616241 -78888312 + MER113 DNA MER1_type? 15 108 -413 2257 114 3 0 chr17 10616798 10617106 -78887447 + AluSg SINE Alu 2 310 0 624 62 0 0 chr17 10617111 10617192 -78887361 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 311 0 0 25 chr17 10617202 10617242 -78887311 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr17 10618292 10618327 -78886226 + AT_rich Low_complexity Low_complexity 1 35 0 2048 116 0 50 chr17 10618360 10618678 -78885875 + AluSx SINE Alu 1 302 -10 352 167 115 0 chr17 10618778 10618856 -78885697 + L2 LINE L2 3187 3273 -40 44 35 0 0 chr17 10619873 10619931 -78884622 + AT_rich Low_complexity Low_complexity 1 58 0 2559 77 0 0 chr17 10619950 10620260 -78884293 - AluY SINE Alu -1 310 1 357 127 79 0 chr17 10620366 10620429 -78884124 + L1ME4a LINE L1 6039 6106 -15 378 259 12 0 chr17 10620687 10620772 -78883781 - MIR3 SINE MIR -12 196 111 355 343 80 29 chr17 10621391 10621566 -78882987 + MIR SINE MIR 52 235 -27 367 308 9 0 chr17 10671755 10671862 -78832691 - MER5A DNA MER1_type -80 109 2 662 253 116 67 chr17 10671940 10672344 -78832209 - Charlie8 DNA MER1_type -1956 461 38 413 269 85 28 chr17 10673462 10673603 -78830950 + MER112 DNA MER1_type 1 149 -111 669 161 136 8 chr17 10673903 10674021 -78830532 + AluJo SINE Alu 3 135 -177 1780 196 0 0 chr17 10674021 10674333 -78830220 + AluJo SINE Alu 1 312 0 1159 37 7 0 chr17 10674398 10674534 -78830019 + AluY SINE Alu 1 137 -174 182 36 0 36 chr17 10674534 10674562 -78829991 + (TCTCCC)n Simple_repeat Simple_repeat 2 28 0 7212 77 15 11 chr17 10674566 10675625 -78828928 + SVA Other Other 2 1194 -219 2093 55 4 0 chr17 10675625 10675881 -78828672 + LTR5 LTR ERVK 1 257 -712 7212 77 15 11 chr17 10675881 10676102 -78828451 + SVA Other Other 1194 1413 0 1371 77 6 0 chr17 10676106 10676276 -78828277 + AluY SINE Alu 127 297 -14 260 308 84 9 chr17 10676616 10676723 -78827830 - MIR SINE MIR -128 134 20 344 304 32 38 chr17 10676921 10677079 -78827474 + MIR3 SINE MIR 46 202 -6 258 228 114 38 chr17 10678070 10678149 -78826404 + MIR3 SINE MIR 70 154 -54 905 233 0 0 chr17 10678464 10678640 -78825913 + L1ME LINE L1 5457 5632 -534 381 189 11 21 chr17 10678649 10678744 -78825809 + MER20 DNA MER1_type 3 96 -123 422 194 10 10 chr17 10679745 10679848 -78824705 + MER20 DNA MER1_type 117 219 0 2102 138 0 0 chr17 10680011 10680323 -78824230 + AluSx SINE Alu 1 312 0 207 204 0 0 chr17 10681074 10681123 -78823430 + (TG)n Simple_repeat Simple_repeat 1 49 0 807 236 166 78 chr17 10682167 10682649 -78821904 + MLT1K LTR MaLR 11 546 -42 1587 172 41 4 chr17 10682649 10682917 -78821636 - AluJo SINE Alu -21 291 14 807 236 166 78 chr17 10682917 10682963 -78821590 + MLT1K LTR MaLR 546 586 -2 1514 232 71 25 chr17 10683121 10683560 -78820993 - MLT1D LTR MaLR -33 472 14 2185 83 4 0 chr17 10684023 10684288 -78820265 - AluSp SINE Alu -47 266 1 783 178 0 15 chr17 10684309 10684444 -78820109 - FLAM_C SINE Alu 0 133 1 391 292 74 60 chr17 10684644 10684860 -78819693 + MIR SINE MIR 6 224 -38 2244 101 10 0 chr17 10685060 10685348 -78819205 - AluSg SINE Alu -19 291 1 2663 202 23 44 chr17 10686188 10686282 -78818271 - MER68 LTR ERV1 0 562 468 1951 131 3 31 chr17 10686282 10686572 -78817981 + AluJo SINE Alu 1 282 -30 2663 202 23 44 chr17 10686572 10687050 -78817503 - MER68 LTR ERV1 -94 468 2 298 284 73 0 chr17 10687095 10687204 -78817349 - L3 LINE CR1 -58 1519 1403 251 254 103 29 chr17 10687335 10687449 -78817104 - MIR3 SINE MIR -42 166 49 617 263 31 5 chr17 10687507 10687881 -78816672 + MER113 DNA MER1_type? 31 479 -42 2435 79 0 13 chr17 10688157 10688473 -78816080 - AluSx SINE Alu 0 312 1 531 65 39 0 chr17 10688704 10688781 -78815772 - MADE1 DNA Mariner 0 80 1 290 284 246 8 chr17 10688998 10689132 -78815421 + MIR SINE MIR 18 183 -79 244 287 0 43 chr17 10689333 10689427 -78815126 + Charlie8 DNA MER1_type 16 105 -2312 2221 106 33 0 chr17 10689452 10689567 -78814986 + AluSx SINE Alu 1 111 -201 207 0 0 0 chr17 10689567 10689590 -78814963 + (TAA)n Simple_repeat Simple_repeat 2 24 0 2221 106 33 0 chr17 10689590 10689776 -78814777 + AluSx SINE Alu 111 312 0 361 224 102 0 chr17 10689879 10689977 -78814576 + MER5B DNA MER1_type 1 108 -70 183 139 0 0 chr17 10690701 10690737 -78813816 + (A)n Simple_repeat Simple_repeat 1 36 0 350 220 291 35 chr17 10691326 10691467 -78813086 + MER5A DNA MER1_type 12 188 -1 306 178 228 30 chr17 10691778 10691879 -78812674 - L2 LINE L2 -14 3299 3179 318 284 71 10 chr17 10692370 10692567 -78811986 + L1ME3A LINE L1 3403 3611 -2535 429 292 105 24 chr17 10692694 10692885 -78811668 + L1ME3A LINE L1 3808 3982 -2164 2280 118 3 0 chr17 10692885 10693189 -78811364 + AluSg SINE Alu 1 305 -5 429 292 105 24 chr17 10693189 10693329 -78811224 + L1ME3A LINE L1 3982 4166 -1980 1777 162 0 18 chr17 10693342 10693626 -78810927 + AluJo SINE Alu 21 299 -13 1703 173 0 18 chr17 10693626 10693904 -78810649 + AluSp SINE Alu 1 273 -40 593 192 8 51 chr17 10693915 10694280 -78810273 + GA-rich Low_complexity Low_complexity 1 349 0 234 184 0 0 chr17 10694280 10694318 -78810235 + A-rich Low_complexity Low_complexity 2 39 0 698 291 43 75 chr17 10694461 10694991 -78809562 + MER34 LTR ERV1 1 513 -29 413 264 196 43 chr17 10695067 10695556 -78808997 + HAL1 LINE L1 2 565 -1942 654 244 95 8 chr17 10695578 10695820 -78808733 + HAL1 LINE L1 1680 1942 -565 216 0 0 0 chr17 10695863 10695887 -78808666 + (TG)n Simple_repeat Simple_repeat 1 24 0 1943 160 0 0 chr17 10695887 10696201 -78808352 - AluJb SINE Alu 0 314 1 319 287 78 61 chr17 10696343 10696573 -78807980 + HAL1 LINE L1 2105 2338 -169 1272 152 14 38 chr17 10696576 10696786 -78807767 + AluJo SINE Alu 1 205 -107 317 302 70 0 chr17 10696792 10696878 -78807675 + HAL1 LINE L1 1779 1870 -637 419 198 0 0 chr17 10696881 10696962 -78807591 + AluJ/FRAM SINE Alu 216 296 -16 2640 138 99 22 chr17 10697085 10697648 -78806905 + MER4B LTR ERV1 1 903 0 4143 103 19 19 chr17 10697771 10698401 -78806152 + MER41B LTR ERV1 6 635 0 660 328 78 17 chr17 10698402 10698968 -78805585 + L1ME3A LINE L1 4475 5094 -1052 2366 81 0 7 chr17 10698968 10699263 -78805290 - AluSg SINE Alu -17 293 1 660 328 78 17 chr17 10699263 10699400 -78805153 + L1ME3A LINE L1 5094 5221 -925 703 317 111 17 chr17 10699406 10699984 -78804569 + L1ME3A LINE L1 5313 5944 -226 2420 240 66 21 chr17 10700193 10700974 -78803579 + L1ME1 LINE L1 5364 6332 -2 24 0 0 0 chr17 10701022 10701046 -78803507 + AT_rich Low_complexity Low_complexity 1 24 0 765 189 8 0 chr17 10701055 10701187 -78803366 + AluJo/FLAM SINE Alu 1 133 -169 1063 157 0 34 chr17 10701187 10701234 -78803319 + AluSg/x SINE Alu 134 181 -131 6006 0 0 0 chr17 10701234 10701870 -78802683 - LTR27 LTR ERV1 0 636 1 1063 157 0 34 chr17 10701870 10702000 -78802553 + AluSg/x SINE Alu 181 305 -7 281 218 127 45 chr17 10702131 10702241 -78802312 - MIR3 SINE MIR -9 199 81 2357 104 0 0 chr17 10702278 10702576 -78801977 - AluSq SINE Alu -15 298 1 299 245 20 20 chr17 10702949 10703047 -78801506 + LTR67 LTR ERVL 460 557 0 2573 59 0 28 chr17 10703211 10703531 -78801022 + AluY SINE Alu 1 311 0 466 304 145 5 chr17 10703543 10703757 -78800796 - MIR SINE MIR -6 256 13 1579 96 0 0 chr17 10705833 10706068 -78798485 + AluSg/x SINE Alu 86 320 0 2311 109 3 10 chr17 10706685 10706998 -78797555 + AluSx SINE Alu 1 311 -1 2281 98 0 3 chr17 10707695 10707992 -78796561 + AluSx SINE Alu 1 296 -16 266 262 37 13 chr17 10708540 10708628 -78795925 - MIR3 SINE MIR -50 158 68 234 238 85 55 chr17 10708813 10708977 -78795576 + L2 LINE L2 2537 2705 -609 1030 171 44 15 chr17 10708983 10709188 -78795365 + L1MB5 LINE L1 5925 6135 -39 2227 115 0 10 chr17 10709191 10709495 -78795058 - AluSc SINE Alu -8 301 1 1499 144 0 13 chr17 10709499 10709728 -78794825 - AluJb SINE Alu -20 292 67 863 295 169 16 chr17 10709794 10710292 -78794261 + L2 LINE L2 2728 3313 0 1640 203 119 43 chr17 10710403 10710872 -78793681 - MLT1D LTR MaLR 0 505 1 2114 79 79 0 chr17 10711105 10711383 -78793170 + AluSc SINE Alu 1 300 -9 279 337 88 33 chr17 10712155 10712267 -78792286 + MIR SINE MIR 1 128 -134 2490 87 0 0 chr17 10712267 10712577 -78791976 - AluY SINE Alu -1 310 1 279 337 88 33 chr17 10712577 10712645 -78791908 + MIR SINE MIR 128 191 -71 396 271 294 0 chr17 10712836 10713006 -78791547 + MIR SINE MIR 18 237 -25 455 72 188 0 chr17 10713201 10713270 -78791283 - AluJb SINE Alu -229 83 2 2147 93 61 0 chr17 10713353 10713631 -78790922 + AluSc SINE Alu 5 299 -10 230 290 0 0 chr17 10714655 10714724 -78789829 + MLT1K LTR MaLR 509 577 -11 189 102 122 20 chr17 10715349 10715398 -78789155 - L3 LINE CR1 -944 633 580 2358 97 0 0 chr17 10715571 10715869 -78788684 + AluSx SINE Alu 1 298 -14 2512 66 10 0 chr17 10716487 10716788 -78787765 + AluY SINE Alu 1 304 -7 250 271 157 50 chr17 10716827 10716967 -78787586 + MIR3 SINE MIR 27 181 -27 266 140 140 0 chr17 10718658 10718715 -78785838 + MLT1K LTR MaLR 378 442 -146 879 226 243 58 chr17 10718731 10718797 -78785756 - MLT1E LTR MaLR -2 591 538 848 155 0 0 chr17 10718797 10718926 -78785627 + FLAM_A SINE Alu 1 129 -4 879 226 243 58 chr17 10718926 10719358 -78785195 - MLT1E LTR MaLR -55 538 1 296 213 32 64 chr17 10719515 10719609 -78784944 + L2 LINE L2 570 660 -2654 240 35 0 0 chr17 10720015 10720044 -78784509 + (A)n Simple_repeat Simple_repeat 1 29 0 193 240 20 0 chr17 10720376 10720426 -78784127 + L2 LINE L2 764 814 -2500 341 290 0 0 chr17 10720441 10720534 -78784019 + MER5B DNA MER1_type 7 99 -79 319 227 0 53 chr17 10720787 10720862 -78783691 + MER5A DNA MER1_type 5 75 -114 1598 181 31 24 chr17 10720879 10721166 -78783387 + AluJb SINE Alu 1 289 -23 2376 98 0 13 chr17 10721353 10721668 -78782885 + AluSx SINE Alu 1 311 -1 1428 277 182 37 chr17 10721805 10722881 -78781672 + L2 LINE L2 1658 2889 -425 330 174 0 81 chr17 10722889 10722975 -78781578 - MER3 DNA MER1_type 0 209 131 640 248 47 0 chr17 10723170 10723319 -78781234 - MER3 DNA MER1_type -53 156 1 647 304 59 45 chr17 10723327 10723682 -78780871 + L2 LINE L2 2898 3257 -56 222 309 11 11 chr17 10724241 10724335 -78780218 + MER5B DNA MER1_type 8 101 -77 311 59 0 0 chr17 10724407 10724458 -78780095 - L1MA4A LINE L1 -275 6028 5978 1637 207 92 36 chr17 10724571 10725049 -78779504 + MLT1D LTR MaLR 1 505 0 710 184 26 33 chr17 10725091 10725243 -78779310 - LTR32 LTR ERVL 0 471 321 246 83 0 0 chr17 10725254 10725290 -78779263 - LTR32 LTR ERVL -119 352 317 239 111 0 0 chr17 10725297 10725333 -78779220 - LTR32 LTR ERVL -119 352 317 228 139 0 0 chr17 10725380 10725416 -78779137 - LTR32 LTR ERVL -119 352 317 259 83 0 0 chr17 10725461 10725497 -78779056 - LTR32 LTR ERVL -119 352 317 235 111 0 0 chr17 10725708 10725744 -78778809 - LTR32 LTR ERVL -119 352 317 2135 149 3 3 chr17 10725944 10726286 -78778267 - LTR32 LTR ERVL -122 349 8 367 164 15 0 chr17 10726299 10726366 -78778187 - MER46A DNA MER2_type -131 105 38 3115 146 19 46 chr17 10726407 10727128 -78777425 + L1MA4A LINE L1 4755 5471 -743 425 71 0 71 chr17 10727125 10727195 -78777358 - L1MA4 LINE L1 -406 5894 5830 * 1272 142 0 0 chr17 10727229 10727440 -78777113 + L1MA4A LINE L1 5469 5679 -624 1027 104 0 8 chr17 10727446 10727580 -78776973 + AluSq/x SINE Alu 1 133 -179 2415 87 0 0 chr17 10727583 10727883 -78776670 + AluSg SINE Alu 1 300 -10 3449 140 27 27 chr17 10727884 10728276 -78776277 + L1MA4A LINE L1 5670 6064 -239 2275 108 0 20 chr17 10728276 10728581 -78775972 - AluSx SINE Alu -13 299 1 3449 140 27 27 chr17 10728581 10728822 -78775731 + L1MA4A LINE L1 6063 6303 0 1674 131 91 7 chr17 10728928 10729062 -78775491 + AluSx SINE Alu 1 122 -190 1997 122 4 0 chr17 10729062 10729369 -78775184 + AluY SINE Alu 1 308 0 1674 131 91 7 chr17 10729369 10729507 -78775046 + AluSx SINE Alu 122 297 -15 493 240 222 0 chr17 10729744 10729915 -78774638 - MER3 DNA MER1_type 0 209 1 2252 114 3 13 chr17 10730263 10730694 -78773859 + AluSp SINE Alu 1 428 0 712 337 10 24 chr17 10730966 10731257 -78773296 + L1MC/D LINE L1 5464 5750 -2058 1965 139 0 42 chr17 10731722 10732031 -78772522 - AluJb SINE Alu -10 302 7 333 0 0 0 chr17 10732506 10732543 -78772010 + (CA)n Simple_repeat Simple_repeat 1 37 0 219 133 0 0 chr17 10732827 10732872 -78771681 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 2120 127 0 13 chr17 10733838 10734137 -78770416 + AluSx SINE Alu 1 295 -17 972 270 179 59 chr17 10734503 10734776 -78769777 - L2 LINE L2 0 3313 3074 2653 159 50 10 chr17 10734776 10735260 -78769293 - MLT1D LTR MaLR -2 503 1 972 270 179 59 chr17 10735260 10735796 -78768757 - L2 LINE L2 -239 3074 2389 199 208 0 42 chr17 10735833 10735881 -78768672 - L2 LINE L2 -1000 2314 2269 2247 107 24 0 chr17 10736238 10736536 -78768017 + AluSx SINE Alu 1 305 -7 549 247 18 120 chr17 10736796 10737079 -78767474 - L2 LINE L2 0 3313 3060 208 194 0 0 chr17 10737193 10737229 -78767324 - L2 LINE L2 -98 3215 3180 2039 103 0 4 chr17 10738278 10738551 -78766002 + AluSq SINE Alu 41 312 -1 888 247 49 21 chr17 10738885 10738908 -78765645 + MIR SINE MIR 13 34 -228 2346 92 0 19 chr17 10738908 10739225 -78765328 + AluSx SINE Alu 1 311 -1 888 247 49 21 chr17 10739225 10739444 -78765109 + MIR SINE MIR 34 262 0 1999 157 0 6 chr17 10740630 10740942 -78763611 - AluJb SINE Alu -2 310 1 706 179 13 64 chr17 10741051 10741207 -78763346 - MER5A DNA MER1_type -40 149 2 190 273 0 0 chr17 10741207 10741251 -78763302 - L3b LINE CR1 -6 1577 1534 459 225 154 115 chr17 10742413 10742443 -78762110 + L1ME4a LINE L1 5551 5578 -543 2250 93 13 19 chr17 10742443 10742754 -78761799 + AluSx SINE Alu 1 309 -3 459 225 154 115 chr17 10742754 10743045 -78761508 + L1ME4a LINE L1 5578 5890 -231 2210 118 3 25 chr17 10743045 10743359 -78761194 + AluSq SINE Alu 1 307 -6 459 225 154 115 chr17 10743359 10743392 -78761161 + L1ME4a LINE L1 5890 5920 -201 623 197 0 16 chr17 10744128 10744452 -78760101 + (CA)n Simple_repeat Simple_repeat 1 318 0 367 198 135 27 chr17 10744623 10744734 -78759819 + MIR SINE MIR 19 141 -121 2341 76 33 13 chr17 10746428 10746732 -78757821 - AluY SINE Alu -1 310 1 4160 171 25 59 chr17 10746889 10747061 -78757492 + L1MB7 LINE L1 4863 5039 -1145 1768 179 6 22 chr17 10747061 10747373 -78757180 + AluJo SINE Alu 1 307 -5 4160 171 25 59 chr17 10747373 10747701 -78756852 + L1MB7 LINE L1 5039 5377 -807 2416 88 10 0 chr17 10747701 10748006 -78756547 + AluSg SINE Alu 1 308 -2 4160 171 25 59 chr17 10748006 10748841 -78755712 + L1MB7 LINE L1 5377 6176 -8 2374 104 3 0 chr17 10749150 10749457 -78755096 + AluSx SINE Alu 1 308 -4 367 340 0 15 chr17 10749461 10749710 -78754843 + (CATG)n Simple_repeat Simple_repeat 1 245 0 1995 121 35 7 chr17 10750293 10750582 -78753971 + AluSx SINE Alu 1 297 -15 396 212 35 18 chr17 10750894 10750924 -78753629 - MER46A DNA MER2_type -2552 179 151 2211 117 13 10 chr17 10750924 10751232 -78753321 - AluSx SINE Alu -3 309 1 2621 129 61 30 chr17 10751235 10751730 -78752823 - L1MA8 LINE L1 -1 6290 5781 396 212 35 18 chr17 10751730 10751808 -78752745 - MER46A DNA MER2_type -2581 150 65 2385 65 0 7 chr17 10751835 10752129 -78752424 - AluY SINE Alu -8 303 12 1365 158 57 11 chr17 10752129 10752384 -78752169 - L1MA8 LINE L1 -513 5778 5509 2247 186 22 52 chr17 10752413 10752646 -78751907 - MER66B LTR ERV1 0 486 248 2278 102 0 3 chr17 10752646 10752941 -78751612 - AluSc SINE Alu -15 294 1 2247 186 22 52 chr17 10752941 10753208 -78751345 - MER66B LTR ERV1 -238 248 1 1313 225 132 78 chr17 10754335 10754646 -78749907 + L2 LINE L2 2494 2787 -526 1745 156 31 10 chr17 10754646 10754935 -78749618 + AluJb SINE Alu 1 295 -17 1313 225 132 78 chr17 10754935 10755345 -78749208 + L2 LINE L2 2787 3275 -38 2288 121 0 3 chr17 10755345 10755650 -78748903 - AluSp SINE Alu -9 304 1 1313 225 132 78 chr17 10755650 10755686 -78748867 + L2 LINE L2 3275 3308 -5 2459 67 0 29 chr17 10755760 10756074 -78748479 - AluY SINE Alu -6 305 1 200 150 25 113 chr17 10756127 10756207 -78748346 - MIR SINE MIR -66 196 124 2231 81 0 14 chr17 10756292 10756614 -78747939 + AluSg SINE Alu 1 318 0 209 339 0 16 chr17 10756615 10756677 -78747876 - MIR3 SINE MIR -143 65 5 265 200 13 40 chr17 10756739 10756814 -78747739 + L1M4 LINE L1 3876 3948 -2198 301 274 128 39 chr17 10757028 10757207 -78747346 + L1M4 LINE L1 4333 4527 -1619 213 264 264 14 chr17 10757275 10757415 -78747138 - MIR SINE MIR -59 203 29 1724 249 169 9 chr17 10757452 10757977 -78746576 + MLT2F LTR ERVL 1 609 -54 1701 199 10 0 chr17 10757989 10758291 -78746262 + AluJb SINE Alu 1 305 -7 183 232 0 0 chr17 10758307 10758363 -78746190 + (TG)n Simple_repeat Simple_repeat 1 56 0 2227 73 17 0 chr17 10758977 10759264 -78745289 + AluY SINE Alu 1 292 -19 429 299 32 25 chr17 10759448 10759605 -78744948 + MIR SINE MIR 31 188 -74 2353 59 42 0 chr17 10759756 10760045 -78744508 + AluY SINE Alu 1 301 -10 2076 104 59 0 chr17 10760173 10760461 -78744092 - AluSx SINE Alu -7 305 1 1833 153 37 79 chr17 10760669 10760718 -78743835 + MLT1B LTR MaLR 1 51 -339 1989 110 0 38 chr17 10760718 10761008 -78743545 + AluSx SINE Alu 21 299 -13 1833 153 37 79 chr17 10761008 10761068 -78743485 + MLT1B LTR MaLR 51 112 -278 2210 119 0 3 chr17 10761068 10761370 -78743183 + AluSq SINE Alu 1 301 -12 1833 153 37 79 chr17 10761370 10761665 -78742888 + MLT1B LTR MaLR 112 389 -1 1949 162 7 13 chr17 10762349 10762657 -78741896 - AluJo SINE Alu -6 306 1 830 211 6 0 chr17 10764273 10764439 -78740114 + MER5A DNA MER1_type 14 180 -9 2224 38 94 0 chr17 10764512 10764778 -78739775 + AluY SINE Alu 1 291 -20 225 292 82 103 chr17 10765678 10765921 -78738632 + MIR SINE MIR 20 257 -5 2031 116 20 30 chr17 10766138 10766439 -78738114 + AluSg SINE Alu 1 298 -12 2445 73 3 0 chr17 10766439 10766739 -78737814 + AluY SINE Alu 1 301 -10 2239 135 0 0 chr17 10766900 10767212 -78737341 - AluSx SINE Alu 0 312 1 2925 174 30 29 chr17 10767341 10767937 -78736616 + L1MB7 LINE L1 5573 6169 -15 269 292 11 11 chr17 10768124 10768213 -78736340 + CT-rich Low_complexity Low_complexity 1 89 0 333 0 0 0 chr17 10768225 10768262 -78736291 + (CA)n Simple_repeat Simple_repeat 2 38 0 2233 113 3 3 chr17 10768397 10768698 -78735855 - AluSx SINE Alu -11 301 1 636 173 133 27 chr17 10768736 10768886 -78735667 + MIR SINE MIR 83 248 -14 764 194 0 0 chr17 10768985 10769109 -78735444 - FLAM_A SINE Alu -5 128 5 192 40 0 0 chr17 10769130 10769155 -78735398 + (TTTTTG)n Simple_repeat Simple_repeat 3 27 0 1715 185 0 4 chr17 10769364 10769645 -78734908 - AluJo SINE Alu -22 290 11 299 261 54 36 chr17 10769767 10769878 -78734675 - MLT1K LTR MaLR -6 582 470 246 283 91 17 chr17 10770256 10770377 -78734176 - MIR3 SINE MIR -37 171 69 1852 125 20 59 chr17 10770725 10771029 -78733524 + AluSx SINE Alu 1 292 -20 2220 88 3 60 chr17 10771031 10771350 -78733203 + AluSg SINE Alu 3 303 -7 472 241 28 57 chr17 10771440 10771581 -78732972 - MIR SINE MIR -40 222 86 1356 152 4 52 chr17 10771594 10771824 -78732729 + AluJo SINE Alu 1 219 -93 29 28 0 0 chr17 10771979 10772015 -78732538 + AT_rich Low_complexity Low_complexity 1 36 0 1885 176 0 16 chr17 10772028 10772334 -78732219 + AluJb SINE Alu 3 303 -9 719 138 0 125 chr17 10772340 10772492 -78732061 + AluJo SINE Alu 1 133 -169 213 276 53 79 chr17 10772499 10772575 -78731978 - MIR SINE MIR -188 74 1 387 0 0 0 chr17 10772723 10772766 -78731787 + (CA)n Simple_repeat Simple_repeat 2 44 0 2406 74 0 7 chr17 10772828 10773125 -78731428 - AluSx SINE Alu -17 295 1 788 228 112 0 chr17 10773560 10773757 -78730796 - MIR SINE MIR -40 222 4 353 314 55 27 chr17 10774315 10774535 -78730018 + LTR33 LTR ERVL 1 226 -295 870 195 0 74 chr17 10775670 10775813 -78728740 + AluJo SINE Alu 137 264 -48 2441 74 0 10 chr17 10775813 10776122 -78728431 - AluY SINE Alu -5 306 1 870 195 0 74 chr17 10776122 10776168 -78728385 + AluJo SINE Alu 264 312 0 851 164 0 8 chr17 10776173 10776307 -78728246 + FLAM_C SINE Alu 1 133 0 262 172 130 83 chr17 10776381 10776550 -78728003 + L1MC4 LINE L1 7865 8041 -1 1850 151 0 17 chr17 10776582 10776874 -78727679 + AluJb SINE Alu 1 287 -25 288 0 0 0 chr17 10776875 10776907 -78727646 + (TA)n Simple_repeat Simple_repeat 2 33 0 1667 253 88 49 chr17 10776924 10777593 -78726960 + L1ME3A LINE L1 5433 6127 -43 1899 158 24 0 chr17 10777596 10777888 -78726665 - AluJb SINE Alu -13 299 1 881 143 0 0 chr17 10777889 10778015 -78726538 - AluJb SINE Alu -186 126 1 547 317 55 11 chr17 10778200 10778383 -78726170 - MIR3 SINE MIR -1 207 17 871 213 6 0 chr17 10778524 10778688 -78725865 - FAM SINE Alu -9 166 2 357 24 0 0 chr17 10778746 10778788 -78725765 + (CA)n Simple_repeat Simple_repeat 1 42 0 730 289 45 42 chr17 10778805 10779137 -78725416 - MLT1K LTR MaLR -71 517 185 2610 52 0 10 chr17 10779592 10779898 -78724655 + AluY SINE Alu 1 303 -8 1474 174 36 3 chr17 10780531 10780836 -78723717 + L1MB3 LINE L1 5869 6183 0 1986 106 3 51 chr17 10780923 10781235 -78723318 - AluSx SINE Alu -15 297 1 30 0 0 0 chr17 10781235 10781265 -78723288 + AT_rich Low_complexity Low_complexity 1 30 0 351 302 128 39 chr17 10781611 10781790 -78722763 + MIR SINE MIR 68 262 0 247 227 359 16 chr17 10781832 10781960 -78722593 - MER5B DNA MER1_type 0 178 7 2459 77 0 3 chr17 10781970 10782269 -78722284 + AluSc SINE Alu 1 298 -11 989 194 0 28 chr17 10782326 10782676 -78721877 + FAM SINE Alu 1 209 0 1190 45 0 0 chr17 10782676 10782809 -78721744 + AluSq/x SINE Alu 1 133 -179 2327 91 0 25 chr17 10782812 10783131 -78721422 + AluY SINE Alu 1 311 0 2099 142 3 3 chr17 10783821 10784130 -78720423 - AluJo SINE Alu -1 311 3 320 345 45 34 chr17 10784353 10784530 -78720023 - L1ME4a LINE L1 -94 6027 5849 2502 72 23 0 chr17 10784854 10785160 -78719393 - AluSp SINE Alu 0 313 1 506 103 20 178 chr17 10785466 10785517 -78719036 - FLAM_A SINE Alu -169 142 85 1887 165 0 0 chr17 10785517 10785808 -78718745 - AluJb SINE Alu -21 291 1 506 103 20 178 chr17 10785808 10785902 -78718651 - FLAM_A SINE Alu -226 85 20 315 273 30 56 chr17 10785905 10786103 -78718450 + L1MC4a LINE L1 5695 5887 -1921 1178 209 0 8 chr17 10786222 10786456 -78718097 - MER106A DNA MER1_type -4 232 1 2421 81 3 0 chr17 10786500 10786795 -78717758 + AluSg SINE Alu 1 296 -14 2102 99 35 3 chr17 10786805 10787087 -78717466 + AluSg SINE Alu 1 291 -19 2499 230 120 43 chr17 10787415 10788575 -78715978 + L2 LINE L2 2035 3311 -2 310 221 197 33 chr17 10789541 10789663 -78714890 + MIR SINE MIR 70 211 -51 316 237 158 36 chr17 10790247 10790386 -78714167 + L1MCa LINE L1 1163 1318 -5108 2329 165 33 26 chr17 10790706 10791166 -78713387 + L1MB5 LINE L1 5711 6173 -1 2401 83 0 0 chr17 10791296 10791597 -78712956 + AluY SINE Alu 1 301 -10 205 280 140 28 chr17 10791870 10791977 -78712576 - L2 LINE L2 -25 3288 3170 2573 65 0 0 chr17 10792220 10792529 -78712024 + AluY SINE Alu 1 309 -2 241 296 48 64 chr17 10792640 10792666 -78711887 - L2 LINE L2 -95 3218 3193 2031 132 3 3 chr17 10792666 10792955 -78711598 - AluJb SINE Alu -23 289 1 241 296 48 64 chr17 10792955 10793053 -78711500 - L2 LINE L2 -120 3193 3096 1496 157 57 4 chr17 10793140 10793402 -78711151 - MLT1B LTR MaLR 0 390 115 246 32 0 0 chr17 10793402 10793433 -78711120 + (TTAG)n Simple_repeat Simple_repeat 2 32 0 783 180 16 0 chr17 10793480 10793608 -78710945 - AluJb SINE Alu -181 131 2 567 146 45 9 chr17 10793612 10793722 -78710831 - MLT1B LTR MaLR -272 118 5 29 0 0 0 chr17 10843982 10844011 -78660542 + AT_rich Low_complexity Low_complexity 1 29 0 2100 103 0 38 chr17 10844221 10844540 -78660013 - AluSc SINE Alu -2 307 1 512 97 0 14 chr17 10845094 10845166 -78659387 + AluJb SINE Alu 40 110 -202 1599 142 0 53 chr17 10845216 10845497 -78659056 + AluJb SINE Alu 40 305 -7 23 0 0 0 chr17 10845660 10845683 -78658870 + AT_rich Low_complexity Low_complexity 1 23 0 2569 41 3 0 chr17 10846048 10846339 -78658214 - AluY SINE Alu -19 292 1 1297 112 66 5 chr17 10846703 10846900 -78657653 + MER46A DNA MER2_type 27 235 -1 426 304 53 24 chr17 10847076 10847283 -78657270 - MLT1K LTR MaLR 0 588 376 747 261 62 55 chr17 10847343 10847600 -78656953 - MLT1K LTR MaLR -328 260 2 287 163 0 0 chr17 10847631 10847680 -78656873 - MER103 DNA DNA -44 122 74 874 154 23 0 chr17 10848773 10848903 -78655650 + FLAM_A SINE Alu 1 133 0 673 283 54 75 chr17 10850417 10850858 -78653695 - L2 LINE L2 -4 3309 2878 767 158 53 18 chr17 10851564 10851735 -78652818 - L1MD1 LINE L1 0 6242 6066 1385 118 5 25 chr17 10851895 10852129 -78652424 + AluSg/x SINE Alu 84 313 0 2560 62 7 0 chr17 10852870 10853178 -78651375 + AluSq SINE Alu 1 310 -3 457 275 56 7 chr17 10853473 10853615 -78650938 - MIR3 SINE MIR -24 184 36 1667 227 56 44 chr17 10853869 10854350 -78650203 - L2 LINE L2 -866 2448 1962 22 0 0 0 chr17 10854450 10854472 -78650081 + AT_rich Low_complexity Low_complexity 1 22 0 2277 112 0 0 chr17 10854839 10855133 -78649420 - AluSx SINE Alu -18 294 1 2018 213 57 32 chr17 10856717 10857209 -78647344 - MLT1D LTR MaLR -1 504 1 228 305 93 82 chr17 10857395 10857664 -78646889 - L2 LINE L2 -338 2976 2705 2340 104 0 0 chr17 10857719 10858016 -78646537 + AluSx SINE Alu 1 297 -15 30 45 0 0 chr17 10858017 10858061 -78646492 + AT_rich Low_complexity Low_complexity 1 44 0 1496 146 99 0 chr17 10858790 10859092 -78645461 - Charlie5 DNA MER1_type -46 2566 2235 2010 140 7 13 chr17 10859366 10859666 -78644887 + AluJb SINE Alu 1 298 -14 22 0 0 0 chr17 10860337 10860359 -78644194 + AT_rich Low_complexity Low_complexity 1 22 0 245 233 250 31 chr17 10860457 10860685 -78643868 - L1M4 LINE L1 -854 5292 5015 481 283 72 38 chr17 10861324 10861561 -78642992 - L1M4 LINE L1 -1119 5027 4783 5096 252 67 26 chr17 10861573 10862561 -78641992 - L1M4 LINE L1 -1630 4516 3569 2245 87 10 17 chr17 10862561 10862861 -78641692 - AluSq SINE Alu -15 298 1 5096 252 67 26 chr17 10862861 10863927 -78640626 - L1M4 LINE L1 -2577 3569 2330 323 279 33 109 chr17 10863910 10863991 -78640562 + L1MC4a LINE L1 4912 4998 -1148 * 2064 78 37 0 chr17 10863991 10864298 -78640255 - AluSg SINE Alu 0 317 1 323 279 33 109 chr17 10864298 10864574 -78639979 + L1MC4a LINE L1 4998 5243 -903 2005 256 136 8 chr17 10864664 10865398 -78639155 + L1MC4a LINE L1 5351 6178 -1630 328 315 116 55 chr17 10865483 10865775 -78638778 + L1MC4a LINE L1 6309 6618 -1190 807 129 0 161 chr17 10865834 10866058 -78638495 + L1MC5 LINE L1 6756 6943 -1018 2419 91 13 0 chr17 10866060 10866368 -78638185 + AluSx SINE Alu 1 312 0 454 176 29 20 chr17 10866406 10866508 -78638045 + L1MC5 LINE L1 7808 7910 -51 22 56 0 0 chr17 10866509 10866545 -78638008 + AT_rich Low_complexity Low_complexity 1 36 0 502 274 52 48 chr17 10866582 10866716 -78637837 - L1MEc LINE L1 -3930 2466 2334 2329 94 0 7 chr17 10866716 10867024 -78637529 - AluSx SINE Alu -6 306 1 502 274 52 48 chr17 10867024 10867199 -78637354 - L1MEc LINE L1 -4062 2334 2156 372 310 7 13 chr17 10867219 10867374 -78637179 - L1MEc LINE L1 -4324 2072 1919 1990 79 11 8 chr17 10867710 10867975 -78636578 - AluSc SINE Alu -9 300 35 2290 105 0 0 chr17 10869027 10869322 -78635231 + AluSg SINE Alu 1 295 -15 306 266 40 24 chr17 10870411 10870535 -78634018 + MLT1K LTR MaLR 460 585 -3 807 151 0 32 chr17 10871908 10872034 -78632519 - FLAM_A SINE Alu -11 122 1 197 312 84 52 chr17 10872075 10872325 -78632228 - L2 LINE L2 -829 2485 2228 2395 96 3 0 chr17 10872605 10872906 -78631647 + AluSp SINE Alu 1 302 -11 2043 127 3 13 chr17 10873022 10873337 -78631216 - AluSx SINE Alu 0 312 1 235 326 56 11 chr17 10873846 10873935 -78630618 - L2 LINE L2 -4 3268 3176 384 189 45 0 chr17 10874997 10875108 -78629445 + GA-rich Low_complexity Low_complexity 2 117 0 2337 57 13 13 chr17 10875139 10875440 -78629113 + AluSq SINE Alu 1 301 -12 2417 141 34 18 chr17 10876247 10876631 -78627922 + MLT1B LTR MaLR 1 390 0 2317 101 0 10 chr17 10876740 10877048 -78627505 - AluSg SINE Alu -5 305 1 526 326 64 65 chr17 10877069 10877651 -78626902 + MLT1K LTR MaLR 2 582 -6 435 347 104 20 chr17 10879272 10879618 -78624935 - L2 LINE L2 0 3313 2939 2235 101 3 0 chr17 10879727 10880025 -78624528 + AluSx SINE Alu 1 299 -13 352 295 110 39 chr17 10880026 10880280 -78624273 - L2 LINE L2 -534 2780 2509 1734 146 10 17 chr17 10880335 10880630 -78623923 + AluJo SINE Alu 1 293 -19 2307 88 0 7 chr17 10880952 10881258 -78623295 - AluSp SINE Alu -9 304 1 555 292 36 18 chr17 10881476 10881644 -78622909 - MIR SINE MIR -2 260 90 248 114 0 0 chr17 10882230 10882265 -78622288 - U2 snRNA snRNA -153 35 1 843 253 150 39 chr17 10882625 10883012 -78621541 - MLT1C LTR MaLR -2 465 36 303 300 152 17 chr17 10883041 10883213 -78621340 + L2 LINE L2 2445 2659 -655 1226 184 108 54 chr17 10883213 10883582 -78620971 + MLT1B LTR MaLR 1 389 -1 303 300 152 17 chr17 10883582 10883646 -78620907 + L2 LINE L2 2659 2713 -601 189 0 0 0 chr17 10883664 10883685 -78620868 + (TCCC)n Simple_repeat Simple_repeat 3 23 0 279 216 59 20 chr17 10883844 10883946 -78620607 + L1MC5 LINE L1 7826 7931 -30 1529 179 4 8 chr17 10883947 10884215 -78620338 + AluJo SINE Alu 1 267 -45 4165 128 11 22 chr17 10884363 10884908 -78619645 - MER41B LTR ERV1 0 635 97 2450 69 0 0 chr17 10884908 10885213 -78619340 + AluY SINE Alu 1 305 -6 4165 128 11 22 chr17 10885213 10885309 -78619244 - MER41B LTR ERV1 -538 97 1 1225 128 41 0 chr17 10885676 10885872 -78618681 - LTR54 LTR ERV1 0 510 307 2018 118 0 19 chr17 10885875 10886188 -78618365 + AluSx SINE Alu 1 307 -5 1301 113 77 31 chr17 10886188 10886199 -78618354 - LTR54 LTR ERV1 -269 241 232 1558 159 20 33 chr17 10886199 10886501 -78618052 + AluJo SINE Alu 1 298 -14 1301 113 77 31 chr17 10886501 10886711 -78617842 - LTR54 LTR ERV1 -278 232 10 2219 88 3 7 chr17 10886806 10887101 -78617452 + AluSp SINE Alu 1 294 -19 2115 108 3 3 chr17 10887797 10888104 -78616449 - AluSx SINE Alu -5 307 1 287 331 129 7 chr17 10888270 10888409 -78616144 - MER5B DNA MER1_type -18 160 5 323 297 155 7 chr17 10888420 10888511 -78616042 - MER5B DNA MER1_type 0 178 102 1847 163 0 0 chr17 10888511 10888818 -78615735 - AluSx SINE Alu -5 307 1 323 297 155 7 chr17 10888818 10888881 -78615672 - MER5B DNA MER1_type -76 102 1 2092 93 0 59 chr17 10889463 10889784 -78614769 - AluSx SINE Alu -2 310 9 782 183 0 0 chr17 10890225 10890345 -78614208 - FLAM_A SINE Alu -13 120 1 2282 92 0 0 chr17 10890349 10890652 -78613901 - AluSc SINE Alu -6 303 1 1745 207 20 17 chr17 10890657 10891010 -78613543 - MLT1F LTR MaLR -62 480 127 1152 113 0 0 chr17 10891013 10891172 -78613381 - AluSp SINE Alu -18 295 137 575 225 17 8 chr17 10891181 10891301 -78613252 - MLT1F LTR MaLR -417 125 5 313 311 19 9 chr17 10891328 10891434 -78613119 + MER91A DNA MER1_type 6 112 -84 2164 97 0 0 chr17 10891462 10891752 -78612801 - AluSc SINE Alu -9 300 11 543 309 122 61 chr17 10891830 10892274 -78612279 - MLT1K LTR MaLR -8 580 110 1099 73 9 23 chr17 10892323 10892542 -78612011 + (GAAA)n Simple_repeat Simple_repeat 2 217 0 1414 195 51 48 chr17 10892635 10893030 -78611523 + MSTD LTR MaLR 1 396 0 1694 134 21 25 chr17 10893320 10893604 -78610949 - AluJo SINE Alu -19 293 11 2011 118 3 0 chr17 10893711 10893998 -78610555 + AluSx SINE Alu 5 292 -20 2213 97 3 0 chr17 10894311 10894609 -78609944 + AluSp SINE Alu 2 300 -13 309 135 0 19 chr17 10894836 10894888 -78609665 - MADE1 DNA Mariner 0 80 30 2185 100 3 3 chr17 10895194 10895505 -78609048 + AluSp SINE Alu 1 311 -2 303 240 48 39 chr17 10895603 10895681 -78608872 - MER113 DNA MER1_type? -414 107 31 2090 184 15 90 chr17 10895681 10896000 -78608553 - MLT1D LTR MaLR -2 503 240 243 0 0 0 chr17 10896006 10896033 -78608520 + (TG)n Simple_repeat Simple_repeat 2 28 0 1675 127 94 0 chr17 10896033 10896301 -78608252 - AluSx SINE Alu -5 307 11 2090 184 15 90 chr17 10896301 10896525 -78608028 - MLT1D LTR MaLR -265 240 1 303 240 48 39 chr17 10896525 10896550 -78608003 - MER113 DNA MER1_type? -490 31 3 2268 87 0 7 chr17 10896703 10897012 -78607541 + AluSc SINE Alu 3 309 0 246 323 75 30 chr17 10898481 10898614 -78605939 + MIR3 SINE MIR 3 141 -67 1881 184 52 0 chr17 10898675 10899022 -78605531 - MLT1A1 LTR MaLR 0 365 1 1813 154 0 0 chr17 10899097 10899376 -78605177 - AluSx SINE Alu -29 283 5 370 263 70 0 chr17 10900002 10900116 -78604437 + Charlie8 DNA MER1_type 41 162 -2255 * 660 143 9 36 chr17 10900114 10900226 -78604327 - Charlie3 DNA MER1_type -2601 109 1 346 287 9 9 chr17 10900231 10900346 -78604207 - L2 LINE L2 -654 2660 2546 2227 90 10 3 chr17 10900350 10900661 -78603892 + AluSp SINE Alu 1 313 0 2113 105 3 6 chr17 10901065 10901378 -78603175 - AluSx SINE Alu 0 312 1 232 304 179 9 chr17 10901382 10901494 -78603059 + L2 LINE L2 2924 3054 -218 575 192 128 0 chr17 10901567 10901692 -78602861 + MER96 DNA MER1_type? 35 175 0 2070 94 3 7 chr17 10902410 10902697 -78601856 - AluSx SINE Alu -26 286 1 439 271 63 58 chr17 10902700 10902735 -78601818 + L2 LINE L2 3106 3139 -174 2173 124 27 43 chr17 10902735 10902892 -78601661 + THE1B LTR MaLR 1 159 -205 2079 78 0 0 chr17 10902892 10903163 -78601390 - AluY SINE Alu -2 309 39 2173 124 27 43 chr17 10903163 10903375 -78601178 + THE1B LTR MaLR 159 364 0 439 271 63 58 chr17 10903375 10903546 -78601007 + L2 LINE L2 3139 3313 0 763 272 195 43 chr17 10903693 10904201 -78600352 + MLT1G1 LTR MaLR 11 595 0 754 159 8 45 chr17 10904235 10904367 -78600186 + FLAM_C SINE Alu 1 127 -6 296 315 99 33 chr17 10905350 10905531 -78599022 + MIR SINE MIR 32 224 -38 224 226 97 32 chr17 10905531 10905593 -78598960 + MIR SINE MIR 120 185 -77 1665 146 48 3 chr17 10905674 10905792 -78598761 + AluSx SINE Alu 1 112 -200 441 0 0 0 chr17 10905792 10905841 -78598712 + (CA)n Simple_repeat Simple_repeat 2 50 0 1665 146 48 3 chr17 10905841 10906016 -78598537 + AluSx SINE Alu 112 307 -5 579 236 93 80 chr17 10906118 10906343 -78598210 - MLT1L LTR MaLR -174 392 110 707 230 16 47 chr17 10906500 10906607 -78597946 - MIR SINE MIR -10 252 152 1995 104 35 0 chr17 10906607 10906895 -78597658 - AluSp SINE Alu -15 298 1 707 230 16 47 chr17 10906895 10906978 -78597575 - MIR SINE MIR -110 152 68 1632 53 0 19 chr17 10907862 10908071 -78596482 + AluY SINE Alu 97 301 -10 2002 111 3 29 chr17 10908343 10908649 -78595904 - AluSx SINE Alu -14 298 1 445 190 49 33 chr17 10908656 10908803 -78595750 - MER106B DNA MER1_type -82 977 3 1136 214 120 79 chr17 10908829 10908957 -78595596 - MLT1A1 LTR MaLR -2 363 242 2093 104 7 3 chr17 10908957 10909255 -78595298 + AluSq SINE Alu 1 299 -14 1136 214 120 79 chr17 10909255 10909468 -78595085 - MLT1A1 LTR MaLR -123 242 8 1031 242 133 32 chr17 10909632 10909971 -78594582 - MLT1E LTR MaLR 0 593 221 248 257 0 27 chr17 10909979 10910053 -78594500 + GA-rich Low_complexity Low_complexity 1 72 0 306 215 194 32 chr17 10910080 10910173 -78594380 - MLT1F LTR MaLR -466 76 3 2226 89 0 16 chr17 10910450 10910764 -78593789 - AluY SINE Alu 0 311 3 568 281 111 38 chr17 10910922 10911157 -78593396 + MIR SINE MIR 8 259 -3 572 339 27 14 chr17 10911331 10911552 -78593001 - MIR SINE MIR -11 251 28 458 220 135 64 chr17 10912067 10912118 -78592435 - LTR67 LTR ERVL -2 555 509 2231 112 0 0 chr17 10912118 10912421 -78592132 + AluSx SINE Alu 1 303 -9 458 220 135 64 chr17 10912421 10912510 -78592043 - LTR67 LTR ERVL -48 509 405 1563 177 50 0 chr17 10912571 10912854 -78591699 + AluJb SINE Alu 1 297 -15 307 202 79 11 chr17 10912855 10912944 -78591609 + L1MC5 LINE L1 7755 7849 -112 554 218 65 0 chr17 10912999 10913123 -78591430 + L1PB4 LINE L1 6022 6153 -3 3510 160 10 42 chr17 10913144 10913851 -78590702 - L1MB8 LINE L1 -6 6172 5489 25 0 0 0 chr17 10913855 10913880 -78590673 + AT_rich Low_complexity Low_complexity 1 25 0 1770 115 4 0 chr17 10913919 10914172 -78590381 - AluSx SINE Alu -17 295 42 4896 160 51 13 chr17 10914182 10915342 -78589211 - L1MB4 LINE L1 -38 6142 4930 2037 142 3 0 chr17 10915401 10915712 -78588841 + AluSx SINE Alu 1 312 0 415 249 54 95 chr17 10915831 10916052 -78588501 - MLT1J LTR MaLR -71 440 229 2473 55 6 10 chr17 10916145 10916457 -78588096 - AluY SINE Alu 0 311 1 502 246 47 47 chr17 10916663 10916857 -78587696 - Charlie8 DNA MER1_type -2233 184 1 774 247 114 0 chr17 10916868 10917095 -78587458 + L3 LINE CR1 1237 1489 -88 187 261 22 0 chr17 10917090 10917136 -78587417 + MIR3 SINE MIR 159 205 -3 * 774 234 35 0 chr17 10917493 10917664 -78586889 + MER45A DNA AcHobo 1 177 -1 1436 172 0 30 chr17 10917718 10917986 -78586567 - AluJb SINE Alu -37 275 16 1276 148 122 130 chr17 10918193 10918261 -78586292 - MLT1A2 LTR MaLR 0 374 307 2105 138 0 0 chr17 10918261 10918573 -78585980 - AluSx SINE Alu 0 312 1 1276 148 122 130 chr17 10918573 10918881 -78585672 - MLT1A2 LTR MaLR -67 307 1 1243 196 191 45 chr17 10919005 10919404 -78585149 + MSTB2 LTR MaLR 1 457 0 2206 112 0 0 chr17 10919547 10919852 -78584701 - AluSc SINE Alu -4 305 1 2186 106 0 25 chr17 10919892 10920229 -78584324 - AluSx SINE Alu 0 329 1 234 0 0 0 chr17 10920369 10920395 -78584158 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1126 280 122 48 chr17 10920882 10921407 -78583146 + MLT1K LTR MaLR 2 565 -23 2071 119 10 6 chr17 10921459 10921842 -78582711 + AluSq SINE Alu 1 384 0 593 306 93 14 chr17 10922533 10922749 -78581804 - MIR SINE MIR -27 235 3 257 211 0 67 chr17 10922783 10922873 -78581680 - L1ME4a LINE L1 -207 5914 5831 461 220 151 5 chr17 10922875 10923061 -78581492 - L1MC5 LINE L1 -35 7926 7714 540 205 153 95 chr17 10923328 10923477 -78581076 - MER3 DNA MER1_type 0 209 45 1872 155 0 13 chr17 10923477 10923793 -78580760 - AluJb SINE Alu 0 312 1 540 205 153 95 chr17 10923793 10923833 -78580720 - MER3 DNA MER1_type -164 45 9 1553 166 111 31 chr17 10925078 10925439 -78579114 - MLT1F LTR MaLR 0 542 169 530 237 26 46 chr17 10925840 10925992 -78578561 - MLT1F LTR MaLR -393 149 1 317 283 54 24 chr17 10926149 10926315 -78578238 - L1ME4a LINE L1 0 6121 5951 606 250 8 0 chr17 10926336 10926468 -78578085 - FLAM_A SINE Alu 0 133 1 193 222 0 0 chr17 10926469 10926505 -78578048 - L2 LINE L2 -10 3303 3268 21 71 0 0 chr17 10926666 10926708 -78577845 + AT_rich Low_complexity Low_complexity 1 42 0 2219 100 0 3 chr17 10926870 10927179 -78577374 - AluSx SINE Alu -4 308 1 1429 189 70 0 chr17 10927203 10927317 -78577236 + AluJb SINE Alu 2 107 -205 399 41 0 0 chr17 10927317 10927366 -78577187 + (CA)n Simple_repeat Simple_repeat 2 50 0 1429 189 70 0 chr17 10927366 10927521 -78577032 + AluJb SINE Alu 107 290 -22 26 50 0 0 chr17 10927545 10927585 -78576968 + AT_rich Low_complexity Low_complexity 1 40 0 1770 140 3 2 chr17 10927722 10927761 -78576792 - L1P4 LINE L1 -464 5702 5665 2022 116 10 3 chr17 10927761 10928062 -78576491 - AluSx SINE Alu -9 303 1 1770 140 3 2 chr17 10928062 10928329 -78576224 - L1P4 LINE L1 -501 5665 5394 569 300 43 36 chr17 10928325 10928453 -78576100 - L1ME4a LINE L1 -219 5951 5825 * 2118 89 3 33 chr17 10928453 10928757 -78575796 - AluSg SINE Alu -15 295 1 569 300 43 36 chr17 10928757 10928929 -78575624 - L1ME4a LINE L1 -345 5825 5649 507 256 1 9 chr17 10928929 10929057 -78575496 - MER5B DNA MER1_type 0 178 51 889 147 0 0 chr17 10929078 10929207 -78575346 - FLAM_C SINE Alu -4 129 1 2337 104 3 0 chr17 10929235 10929542 -78575011 + AluSp SINE Alu 1 308 -5 6594 42 0 89 chr17 10929548 10930473 -78574080 + L1PA7 LINE L1 5312 6154 0 2050 102 11 18 chr17 10930497 10930781 -78573772 + AluSx SINE Alu 1 282 -30 452 283 170 22 chr17 10930831 10931012 -78573541 - L1ME4a LINE L1 -490 5672 5464 197 298 250 0 chr17 10932216 10932320 -78572233 + MIR SINE MIR 132 261 -1 23 33 0 0 chr17 10932321 10932351 -78572202 + AT_rich Low_complexity Low_complexity 1 30 0 577 245 0 14 chr17 10932393 10932532 -78572021 + L2 LINE L2 3176 3312 -1 818 263 84 20 chr17 10932606 10932997 -78571556 + L1ME4a LINE L1 5704 6119 -2 887 199 48 15 chr17 10933151 10933357 -78571196 - LTR67 LTR ERVL 0 557 345 622 275 17 0 chr17 10933425 10933603 -78570950 + MER5A DNA MER1_type 9 189 0 2099 144 0 16 chr17 10933671 10934016 -78570537 + AluSx SINE Alu 2 312 0 258 253 16 134 chr17 10934041 10934227 -78570326 - LTR67 LTR ERVL -387 170 7 475 310 6 44 chr17 10934292 10934379 -78570174 + L1ME4a LINE L1 4976 5065 -1081 2305 96 0 32 chr17 10934379 10934691 -78569862 - AluSq SINE Alu -11 302 1 475 310 6 44 chr17 10934691 10934964 -78569589 + L1ME4a LINE L1 5065 5322 -824 593 174 65 76 chr17 10934976 10935027 -78569526 - MLT1F1 LTR MaLR 0 567 517 1783 176 6 29 chr17 10935027 10935340 -78569213 - AluJo SINE Alu -6 306 1 593 174 65 76 chr17 10935340 10935472 -78569081 - MLT1F1 LTR MaLR -50 517 386 521 205 113 51 chr17 10935580 10935775 -78568778 + L1ME4a LINE L1 5522 5728 -393 2555 77 0 0 chr17 10935885 10936195 -78568358 + AluY SINE Alu 1 310 -1 238 224 45 83 chr17 10936209 10936318 -78568235 + L1ME4a LINE L1 5961 6064 -57 2484 87 0 3 chr17 10936318 10936627 -78567926 - AluSx SINE Alu -4 308 1 238 224 45 83 chr17 10936627 10936673 -78567880 + L1ME4a LINE L1 6064 6110 -11 402 327 53 19 chr17 10936846 10937109 -78567444 + L3 LINE CR1 1128 1399 -178 256 244 39 13 chr17 10937132 10937210 -78567343 - LTR67 LTR ERVL -2 555 476 2194 103 0 3 chr17 10937468 10937758 -78566795 - AluSg SINE Alu -21 289 1 205 256 0 0 chr17 10938658 10938701 -78565852 - L2 LINE L2 -22 3291 3249 726 245 67 114 chr17 10938705 10939170 -78565383 - LTR67 LTR ERVL -7 550 108 287 308 70 2 chr17 10939271 10939419 -78565134 - MIR SINE MIR -61 147 21 203 179 89 0 chr17 10939451 10939507 -78565046 - MIR SINE MIR -83 179 119 2473 111 5 45 chr17 10939668 10939883 -78564670 - THE1B LTR MaLR 0 364 169 2158 82 54 7 chr17 10939883 10940163 -78564390 + AluY SINE Alu 1 293 -18 2473 111 5 45 chr17 10940163 10940326 -78564227 - THE1B LTR MaLR -195 169 1 268 326 20 34 chr17 10941099 10941246 -78563307 + L2 LINE L2 2937 3081 -191 1656 185 24 0 chr17 10941624 10941911 -78562642 - AluJb SINE Alu -18 294 1 185 224 121 0 chr17 10941912 10941970 -78562583 - MIR SINE MIR -83 179 115 2574 77 0 0 chr17 10942211 10942522 -78562031 + AluY SINE Alu 1 311 0 465 206 0 0 chr17 10942780 10942887 -78561666 + (TGGA)n Simple_repeat Simple_repeat 4 110 0 2356 106 0 0 chr17 10943515 10943817 -78560736 - AluSx SINE Alu -10 302 1 552 242 88 33 chr17 10944240 10944502 -78560051 + MLT1L LTR MaLR 71 451 -164 1506 178 70 7 chr17 10944511 10944797 -78559756 + AluJo SINE Alu 1 304 -8 705 141 27 7 chr17 10944798 10944947 -78559606 + GA-rich Low_complexity Low_complexity 4 155 0 2318 110 3 0 chr17 10944955 10945264 -78559289 + AluSp SINE Alu 1 310 -3 261 237 40 13 chr17 10945314 10945390 -78559163 + MLT1L LTR MaLR 537 614 -1 2000 156 0 3 chr17 10945532 10945834 -78558719 - AluJb SINE Alu -11 301 1 1711 189 0 25 chr17 10945880 10946197 -78558356 - AluJo SINE Alu -3 309 1 552 214 8 8 chr17 10946303 10946429 -78558124 + L2 LINE L2 3188 3313 0 557 218 16 0 chr17 10947145 10947269 -78557284 - MIR SINE MIR -11 251 126 296 182 0 61 chr17 10947276 10947342 -78557211 - L2 LINE L2 -7 3306 3245 2118 110 7 26 chr17 10947363 10947671 -78556882 - AluSx SINE Alu -10 302 1 317 278 211 0 chr17 10948752 10948932 -78555621 + MIR SINE MIR 31 248 -14 1592 134 50 64 chr17 10949909 10950102 -78554451 - AluJb SINE Alu -5 307 118 2757 33 0 0 chr17 10950102 10950409 -78554144 + AluY SINE Alu 1 307 -4 1592 134 50 64 chr17 10950409 10950498 -78554055 - AluJb SINE Alu -194 118 29 222 174 0 0 chr17 10950587 10950633 -78553920 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 216 174 43 0 chr17 10950753 10950799 -78553754 + A-rich Low_complexity Low_complexity 2 49 0 294 84 37 19 chr17 10951345 10951407 -78553146 + L1MB2 LINE L1 6012 6074 -106 382 278 6 81 chr17 10951817 10951990 -78552563 - HAL1b LINE L1 -436 912 753 573 88 36 146 chr17 10952014 10952063 -78552490 - L1MB3 LINE L1 -11 6172 6119 2168 131 3 0 chr17 10952063 10952368 -78552185 - AluSx SINE Alu -6 306 1 573 88 36 146 chr17 10952368 10952455 -78552098 - L1MB3 LINE L1 -64 6119 6051 371 202 24 4 chr17 10952462 10952546 -78552007 + AluJo SINE Alu 1 56 -252 852 181 0 0 chr17 10952546 10952673 -78551880 - AluJb SINE Alu -55 257 131 1520 148 12 0 chr17 10952674 10952917 -78551636 + AluJo SINE Alu 66 311 -1 4086 170 27 29 chr17 10952924 10954067 -78550486 - L1MB3 LINE L1 -172 6011 4865 1798 154 73 20 chr17 10954067 10954423 -78550130 - THE1C LTR MaLR 0 375 1 4086 170 27 29 chr17 10954423 10954642 -78549911 - L1MB3 LINE L1 -1318 4865 4647 1844 186 112 23 chr17 10954758 10955187 -78549366 - MLT1C LTR MaLR 0 467 1 580 263 116 17 chr17 10955438 10955670 -78548883 + MIR SINE MIR 5 259 -3 1865 156 20 3 chr17 10955798 10956100 -78548453 - AluSq SINE Alu -6 307 1 286 227 0 13 chr17 10956105 10956180 -78548373 - L1MB3 LINE L1 -1460 4686 4613 291 182 0 0 chr17 10956180 10956257 -78548296 + GA-rich Low_complexity Low_complexity 2 78 0 374 221 115 25 chr17 10956284 10956406 -78548147 - L1MB3 LINE L1 -1526 4620 4488 921 174 79 0 chr17 10956668 10956846 -78547707 + LTR47A LTR ERVL 261 452 0 246 279 12 47 chr17 10956857 10957029 -78547524 - L1MB3 LINE L1 -1674 4472 4307 1683 171 0 45 chr17 10957045 10957354 -78547199 + AluJb SINE Alu 1 295 -17 1346 199 4 4 chr17 10957371 10957637 -78546916 - L1MD3 LINE L1 -1 7994 7729 1950 240 66 31 chr17 10957677 10958376 -78546177 - L1MB3 LINE L1 -1870 4276 3554 2450 87 3 0 chr17 10958417 10958726 -78545827 + AluSp SINE Alu 1 310 -3 1458 162 46 18 chr17 10959492 10959819 -78544734 - Charlie1 DNA MER1_type -6 2755 2420 1811 83 21 0 chr17 10959827 10960068 -78544485 - L1P4 LINE L1 -347 5819 5574 908 133 8 0 chr17 10960069 10960197 -78544356 - AluSq/x SINE Alu -184 129 1 5523 185 6 42 chr17 10960197 10961153 -78543400 - L1 LINE L1 -1890 4256 3350 1405 102 15 5 chr17 10961153 10961359 -78543194 - L1PB2 LINE L1 -1 6150 5943 5523 185 6 42 chr17 10961359 10961607 -78542946 - L1 LINE L1 -2796 3350 3095 201 278 69 0 chr17 10961614 10961686 -78542867 - L3 LINE CR1 -191 1386 1310 1043 176 11 0 chr17 10961695 10961882 -78542671 + MER5A DNA MER1_type 1 189 0 202 103 0 0 chr17 10961893 10961922 -78542631 - MER5C DNA MER1_type -4 320 292 2354 102 3 3 chr17 10962062 10962375 -78542178 + AluSq SINE Alu 1 313 0 331 272 39 10 chr17 10962381 10962484 -78542069 - MER5C DNA MER1_type -214 110 5 373 198 35 0 chr17 10962554 10962647 -78541906 - MER5A DNA MER1_type -89 100 4 378 274 33 26 chr17 10962656 10962809 -78541744 - L3 LINE CR1 -266 1311 1158 615 266 55 10 chr17 10963807 10964006 -78540547 + MIR SINE MIR 49 256 -6 2163 120 16 45 chr17 10964395 10964770 -78539783 + THE1B LTR MaLR 1 364 0 1031 249 99 78 chr17 10965499 10965924 -78538629 + MLT1K LTR MaLR 94 527 -61 2255 99 0 0 chr17 10966185 10966487 -78538066 - AluSx SINE Alu 0 302 1 2018 188 53 2 chr17 10966548 10966963 -78537590 + MER63B DNA MER1_type 1 436 0 909 226 157 63 chr17 10967260 10967302 -78537251 - LTR33 LTR ERVL 0 521 484 2173 116 162 8 chr17 10967302 10967673 -78536880 - MSTA LTR MaLR 0 428 1 909 226 157 63 chr17 10967673 10968090 -78536463 - LTR33 LTR ERVL -37 484 19 212 304 109 22 chr17 10968446 10968584 -78535969 + MIR3 SINE MIR 13 162 -46 183 80 0 0 chr17 10968802 10968827 -78535726 + (CAA)n Simple_repeat Simple_repeat 2 26 0 502 255 26 63 chr17 10969796 10970022 -78534531 - MIR SINE MIR -20 242 26 717 144 4 43 chr17 10970325 10970600 -78533953 + (ATGGTG)n Simple_repeat Simple_repeat 1 264 0 770 168 6 0 chr17 10970618 10970779 -78533774 + (ATG)n Simple_repeat Simple_repeat 3 164 0 746 195 43 16 chr17 10971039 10971224 -78533329 - L1MB8 LINE L1 -1 6177 5988 405 284 35 35 chr17 10971242 10971383 -78533170 - MIR SINE MIR -108 154 14 273 313 26 52 chr17 10971392 10971507 -78533046 - MIR SINE MIR -67 141 30 200 319 88 18 chr17 10971965 10972078 -78532475 + MIR SINE MIR 29 149 -59 186 133 0 0 chr17 10972156 10972186 -78532367 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 1912 180 29 35 chr17 10972197 10972703 -78531850 - L1MA9 LINE L1 -12 6172 5667 225 159 0 0 chr17 10972728 10972772 -78531781 - LTR66 LTR ERVL -169 441 398 1739 123 60 97 chr17 10972772 10972889 -78531664 - L1M2 LINE L1 -535 5777 5657 2969 13 0 0 chr17 10972889 10973207 -78531346 + AluYb8 SINE Alu 1 318 0 1739 123 60 97 chr17 10973207 10973438 -78531115 - L1M2 LINE L1 -655 5657 5442 311 161 0 16 chr17 10975260 10975322 -78529231 - MER103 DNA DNA -87 79 19 215 330 21 0 chr17 10975493 10975590 -78528963 + (GGGTG)n Simple_repeat Simple_repeat 2 100 0 5277 64 18 0 chr17 10976369 10977045 -78527508 + L1PA7 LINE L1 5463 6150 -4 224 222 37 0 chr17 10978337 10978391 -78526162 + CT-rich Low_complexity Low_complexity 3 58 0 441 0 0 0 chr17 10978992 10979041 -78525512 + (TG)n Simple_repeat Simple_repeat 2 50 0 241 301 68 8 chr17 10979515 10979648 -78524905 - MER117 DNA MER1_type -56 141 1 390 298 68 58 chr17 10980260 10980814 -78523739 + L1ME4a LINE L1 5287 5849 -272 2235 93 7 17 chr17 10980814 10981115 -78523438 + AluSx SINE Alu 1 298 -14 390 298 68 58 chr17 10981115 10981165 -78523388 + L1ME4a LINE L1 5849 5897 -224 24 32 0 0 chr17 10981183 10981214 -78523339 + AT_rich Low_complexity Low_complexity 1 31 0 538 162 152 0 chr17 10981215 10981320 -78523233 - FLAM_C SINE Alu -2 141 21 23 0 0 0 chr17 10981320 10981343 -78523210 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr17 10981445 10981476 -78523077 + AT_rich Low_complexity Low_complexity 1 31 0 832 187 19 0 chr17 10981485 10981640 -78522913 - FRAM SINE Alu -2 174 17 25 0 0 0 chr17 10982693 10982718 -78521835 + AT_rich Low_complexity Low_complexity 1 25 0 820 124 31 16 chr17 10982718 10982847 -78521706 - FLAM_C SINE Alu 0 133 3 2256 112 3 7 chr17 10982859 10983164 -78521389 - AluSx SINE Alu -8 304 1 255 268 71 62 chr17 10983166 10983278 -78521275 - MIR SINE MIR -98 164 52 413 350 7 0 chr17 10984280 10984417 -78520136 - MIR3 SINE MIR -4 204 67 1497 248 76 11 chr17 10986202 10986674 -78517879 + MER113 DNA MER1_type? 6 508 -13 2272 102 17 0 chr17 10986909 10987202 -78517351 + AluSp SINE Alu 1 298 -15 291 250 140 30 chr17 10987546 10987646 -78516907 - L2 LINE L2 -23 3249 3139 2083 120 7 13 chr17 10988065 10988365 -78516188 - AluSg1 SINE Alu -11 298 1 2431 88 0 0 chr17 10988950 10989244 -78515309 + AluSq SINE Alu 1 294 -19 303 180 49 0 chr17 10990453 10990514 -78514039 + MER69 DNA AcHobo 1 64 -1162 255 143 155 24 chr17 10990645 10990729 -78513824 + MER69 DNA AcHobo 2389 2483 -43 2204 91 0 0 chr17 10990731 10991006 -78513547 + AluSq SINE Alu 1 275 -38 1971 190 52 0 chr17 10991051 10991398 -78513155 + MLT1A1 LTR MaLR 1 365 0 1976 103 0 0 chr17 10992046 10992298 -78512255 + AluSx SINE Alu 49 300 -12 262 203 0 17 chr17 10992322 10992381 -78512172 + L1ME LINE L1 5725 5782 -380 407 299 30 48 chr17 10994062 10994229 -78510324 - MIR SINE MIR -89 173 10 2344 98 0 22 chr17 10994883 10995198 -78509355 + AluSc SINE Alu 2 309 0 183 184 0 82 chr17 10995232 10995281 -78509272 - L2 LINE L2 -190 3082 3038 2630 59 0 0 chr17 10995399 10995704 -78508849 - AluY SINE Alu -6 305 1 473 352 26 11 chr17 10995778 10996042 -78508511 - L1ME LINE L1 -352 5818 5551 2301 82 10 26 chr17 10996260 10996605 -78507948 + AluSx SINE Alu 14 353 0 230 287 0 35 chr17 10997146 10997224 -78507329 + (CA)n Simple_repeat Simple_repeat 1 77 -7 2047 122 3 7 chr17 10997224 10997518 -78507035 - AluSx SINE Alu -19 293 1 230 287 0 35 chr17 10997518 10997526 -78507027 + (CA)n Simple_repeat Simple_repeat 77 84 0 216 0 0 0 chr17 10997528 10997552 -78507001 + (T)n Simple_repeat Simple_repeat 1 24 0 1534 213 7 3 chr17 10997593 10997894 -78506659 - AluJo SINE Alu -10 302 1 23 0 0 0 chr17 10998093 10998116 -78506437 + AT_rich Low_complexity Low_complexity 1 23 0 840 183 0 0 chr17 10998119 10998250 -78506303 - FLAM_C SINE Alu -2 131 1 2413 61 0 0 chr17 10998439 10998746 -78505807 - AluSc SINE Alu 0 307 1 779 301 65 0 chr17 10998826 10999055 -78505498 - MIR SINE MIR -10 252 9 2339 102 0 25 chr17 10999233 10999548 -78505005 - AluSc SINE Alu -2 307 1 1739 153 0 67 chr17 10999593 10999761 -78504792 - AluJb SINE Alu -19 293 154 2898 13 0 0 chr17 10999761 11000072 -78504481 - AluYa5 SINE Alu 0 311 1 1739 153 0 67 chr17 11000072 11000217 -78504336 - AluJb SINE Alu -158 154 1 28 48 0 0 chr17 11000283 11000325 -78504228 + AT_rich Low_complexity Low_complexity 1 42 0 336 374 43 0 chr17 11001137 11001324 -78503229 + L2 LINE L2 1851 2045 -1269 2422 108 0 6 chr17 11001435 11001749 -78502804 - AluSx SINE Alu 0 312 1 2168 99 55 0 chr17 11002472 11002589 -78501964 + AluSx SINE Alu 1 110 -202 184 29 29 29 chr17 11002589 11002623 -78501930 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2168 99 55 0 chr17 11002623 11002797 -78501756 + AluSx SINE Alu 110 308 -4 311 282 162 0 chr17 11002936 11003053 -78501500 + L2 LINE L2 3136 3271 -1 2215 112 3 0 chr17 11003507 11003835 -78500718 + AluSx SINE Alu 1 329 0 337 287 107 56 chr17 11004127 11004343 -78500210 + MIR SINE MIR 31 257 -5 806 193 30 6 chr17 11004344 11004510 -78500043 - FRAM SINE Alu -7 169 1 651 200 33 44 chr17 11005440 11005620 -78498933 + MER20 DNA MER1_type 42 219 0 2206 117 0 3 chr17 11006396 11006696 -78497857 + AluSq SINE Alu 1 299 -14 288 247 116 7 chr17 11007120 11007266 -78497287 + MER3 DNA MER1_type 48 209 0 2217 96 4 0 chr17 11007369 11007686 -78496867 + AluSx SINE Alu 1 318 0 235 325 0 12 chr17 11007686 11007769 -78496784 - MIR3 SINE MIR -7 201 120 560 224 105 28 chr17 11007770 11007862 -78496691 + MIR SINE MIR 51 159 -103 1780 140 101 3 chr17 11007862 11008190 -78496363 + MER46B DNA MER2_type 2 236 0 560 224 105 28 chr17 11008190 11008240 -78496313 + MIR SINE MIR 159 204 -58 2204 123 0 7 chr17 11008242 11008551 -78496002 + AluSx SINE Alu 1 307 -5 278 300 40 0 chr17 11008747 11008847 -78495706 + MER91A DNA MER1_type 93 196 0 198 172 259 0 chr17 11008847 11008905 -78495648 - MIR SINE MIR -77 131 59 2143 212 21 60 chr17 11009200 11009693 -78494860 + MER74A LTR ERVL 2 470 -88 2134 108 24 0 chr17 11009693 11009980 -78494573 - AluSx SINE Alu -16 296 3 2143 212 21 60 chr17 11009980 11010066 -78494487 + MER74A LTR ERVL 470 558 0 198 327 129 10 chr17 11010299 11010400 -78494153 + MIR3 SINE MIR 60 172 -36 2379 92 0 0 chr17 11010544 11010838 -78493715 + AluSc SINE Alu 1 294 -15 180 0 0 0 chr17 11011246 11011266 -78493287 + (TAA)n Simple_repeat Simple_repeat 3 22 0 468 269 0 0 chr17 11011266 11011370 -78493183 - MIR SINE MIR -2 260 157 2687 48 0 3 chr17 11011461 11011772 -78492781 - AluY SINE Alu -1 310 1 273 351 13 0 chr17 11011772 11011849 -78492704 - MIR SINE MIR -114 148 71 307 276 61 10 chr17 11012161 11012259 -78492294 + MIR SINE MIR 110 212 -50 669 142 39 113 chr17 11012444 11012617 -78491936 - MER53 DNA DNA 0 189 32 805 159 0 0 chr17 11012617 11012762 -78491791 - L1MA4 LINE L1 -6 6294 6150 669 142 39 113 chr17 11012762 11012792 -78491761 - MER53 DNA DNA -157 32 1 1964 129 57 0 chr17 11013292 11013572 -78490981 - AluSg SINE Alu -14 296 1 2180 128 0 28 chr17 11013802 11014122 -78490431 - AluSx SINE Alu 0 312 2 31 26 0 0 chr17 11014682 11014720 -78489833 + AT_rich Low_complexity Low_complexity 1 38 0 1459 202 69 0 chr17 11014821 11014983 -78489570 - AluJb SINE Alu -16 296 106 255 61 0 0 chr17 11014983 11015016 -78489537 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 1459 202 69 0 chr17 11015016 11015130 -78489423 - AluJb SINE Alu -206 106 1 2350 179 70 56 chr17 11015133 11015580 -78488973 + L1MB7 LINE L1 5557 5996 -188 2372 96 0 3 chr17 11015580 11015883 -78488670 + AluSc SINE Alu 1 302 -7 2350 179 70 56 chr17 11015883 11015976 -78488577 + L1MB7 LINE L1 5996 6109 -75 2031 139 7 7 chr17 11015976 11016271 -78488282 - AluSx SINE Alu -17 295 1 2350 179 70 56 chr17 11016271 11016339 -78488214 + L1MB7 LINE L1 6109 6175 -9 295 259 148 9 chr17 11016988 11017096 -78487457 + L2 LINE L2 3191 3313 0 230 234 258 8 chr17 11017169 11017297 -78487256 - MARNA DNA Mariner -17 569 410 2304 101 0 16 chr17 11017307 11017614 -78486939 + AluSg SINE Alu 1 302 -8 2589 78 0 0 chr17 11018484 11018793 -78485760 + AluSc SINE Alu 1 309 0 2175 118 17 0 chr17 11019859 11020147 -78484406 + AluSq SINE Alu 1 293 -20 2273 93 23 0 chr17 11020481 11020782 -78483771 - AluY SINE Alu -3 308 1 394 269 200 14 chr17 11021099 11021244 -78483309 + MIR SINE MIR 11 182 -80 571 86 0 21 chr17 11021757 11021850 -78482703 + (TTCCC)n Simple_repeat Simple_repeat 3 93 0 1958 157 20 0 chr17 11021866 11022171 -78482382 - AluSq SINE Alu -2 311 1 469 177 20 11 chr17 11022331 11022499 -78482054 + MLT1E1 LTR MaLR 1 231 -423 2236 116 0 3 chr17 11023711 11024012 -78480541 + AluSg SINE Alu 1 300 -10 218 284 90 0 chr17 11024204 11024271 -78480282 - MIR3 SINE MIR -10 198 126 200 320 137 23 chr17 11024281 11024456 -78480097 - MIR SINE MIR -14 248 54 286 230 0 4 chr17 11024961 11025065 -78479488 + MLT1E1 LTR MaLR 79 229 -425 2360 91 7 7 chr17 11025081 11025390 -78479163 + AluSg SINE Alu 1 309 -1 403 238 14 61 chr17 11025597 11025749 -78478804 + MER57A LTR ERV1 42 190 -244 817 222 103 35 chr17 11025754 11026073 -78478480 + MER57A LTR ERV1 123 403 0 2184 126 0 25 chr17 11026354 11026672 -78477881 + AluSx SINE Alu 1 310 -2 446 88 15 0 chr17 11026672 11026740 -78477813 + (GGAA)n Simple_repeat Simple_repeat 2 70 0 540 238 116 11 chr17 11026744 11026925 -78477628 + MIR SINE MIR 63 262 0 351 0 0 0 chr17 11028600 11028639 -78475914 + (T)n Simple_repeat Simple_repeat 1 39 0 2254 108 0 3 chr17 11029734 11030031 -78474522 - AluSx SINE Alu -14 298 3 886 232 11 21 chr17 11031185 11031250 -78473303 + MER5A DNA MER1_type 2 66 -123 1598 174 30 27 chr17 11031250 11031549 -78473004 + AluJo SINE Alu 2 301 -11 886 232 11 21 chr17 11031549 11031673 -78472880 + MER5A DNA MER1_type 66 189 0 223 256 26 39 chr17 11031690 11031768 -78472785 - MIR SINE MIR -91 117 41 3517 228 36 19 chr17 11031794 11032592 -78471961 + MER21B LTR ERV1 1 812 -51 799 255 109 40 chr17 11033220 11033418 -78471135 - MER113 DNA MER1_type? -169 352 120 2656 168 19 28 chr17 11033418 11033883 -78470670 + MLT1C LTR MaLR 5 465 -2 799 255 109 40 chr17 11033883 11034013 -78470540 - MER113 DNA MER1_type? -401 120 1 2293 96 0 7 chr17 11034064 11034365 -78470188 - AluSq SINE Alu -14 299 1 1180 36 0 0 chr17 11035971 11036108 -78468445 + AluY SINE Alu 166 302 -9 2027 94 11 7 chr17 11037643 11037938 -78466615 - AluSq SINE Alu 0 304 9 1070 158 33 0 chr17 11038156 11038339 -78466214 - MER5A DNA MER1_type 0 189 1 326 276 217 7 chr17 11038354 11038506 -78466047 + MER5A DNA MER1_type 6 189 0 456 62 0 0 chr17 11038612 11038676 -78465877 + (TG)n Simple_repeat Simple_repeat 2 65 0 239 309 21 0 chr17 11038955 11039049 -78465504 + CT-rich Low_complexity Low_complexity 4 99 0 201 133 0 0 chr17 11039091 11039121 -78465432 + (CA)n Simple_repeat Simple_repeat 1 30 0 2299 110 0 0 chr17 11039153 11039452 -78465101 - AluSx SINE Alu -13 299 1 5893 184 116 17 chr17 11039923 11040118 -78464435 - Charlie1a DNA MER1_type -1306 1455 1281 2258 116 0 0 chr17 11040118 11040420 -78464133 - AluSx SINE Alu -10 302 1 5893 184 116 17 chr17 11040420 11041547 -78463006 - Charlie1a DNA MER1_type -1480 1281 1 188 276 172 11 chr17 11041658 11041745 -78462808 + MER5A DNA MER1_type 89 189 0 273 156 219 94 chr17 11041889 11042049 -78462504 - MER104 DNA Tc2 0 180 1 277 268 0 14 chr17 11042151 11042222 -78462331 - MER5A DNA MER1_type -88 101 32 260 233 53 47 chr17 11042226 11042376 -78462177 - MER113 DNA MER1_type? -370 151 1 931 317 165 6 chr17 11042611 11043150 -78461403 - L3 LINE CR1 -182 1395 771 188 328 57 49 chr17 11044236 11044358 -78460195 - L2 LINE L2 -7 3265 3143 328 296 23 0 chr17 11045038 11045126 -78459427 + MIR3 SINE MIR 108 197 -11 203 313 76 30 chr17 11045525 11045656 -78458897 + L2 LINE L2 3116 3252 -20 869 211 0 0 chr17 11046431 11046592 -78457961 - AluSx SINE Alu -4 308 148 1190 129 0 6 chr17 11046609 11046772 -78457781 - AluSx SINE Alu -150 162 1 753 85 0 0 chr17 11047265 11047371 -78457182 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 2332 87 3 0 chr17 11047376 11047675 -78456878 - AluSp SINE Alu 0 313 14 505 287 0 18 chr17 11047747 11047914 -78456639 - MER103 DNA DNA -1 165 2 247 217 0 83 chr17 11048045 11048105 -78456448 + L2 LINE L2 3218 3272 0 2064 143 0 10 chr17 11048224 11048538 -78456015 + AluSx SINE Alu 1 311 -1 596 301 163 0 chr17 11048553 11048749 -78455804 - MIR SINE MIR -18 244 17 239 248 133 26 chr17 11048776 11048889 -78455664 - L2 LINE L2 -25 3247 3123 22 35 0 0 chr17 11049127 11049156 -78455397 + AT_rich Low_complexity Low_complexity 1 29 0 447 310 26 13 chr17 11049187 11049342 -78455211 - MIR SINE MIR -105 157 1 306 106 0 0 chr17 11049640 11049687 -78454866 + (CA)n Simple_repeat Simple_repeat 2 48 0 2238 117 0 3 chr17 11050116 11050415 -78454138 + AluSx SINE Alu 1 298 -14 2540 60 0 22 chr17 11050554 11050868 -78453685 + AluY SINE Alu 1 307 -4 769 129 129 0 chr17 11052128 11052268 -78452285 - L1MA10 LINE L1 0 6334 6177 379 305 67 0 chr17 11053316 11053421 -78451132 - MIR SINE MIR -67 141 30 673 281 47 10 chr17 11053872 11054064 -78450489 + MIR SINE MIR 6 204 -58 326 284 86 0 chr17 11054413 11054494 -78450059 + MER81 DNA DNA 4 91 -23 643 134 0 0 chr17 11054605 11054702 -78449851 - AluSc SINE Alu 0 309 213 255 263 200 0 chr17 11054867 11054947 -78449606 - L2 LINE L2 0 3313 3218 446 282 219 7 chr17 11055020 11055256 -78449297 - L2 LINE L2 -262 3051 2770 711 47 20 10 chr17 11055525 11055780 -78448773 + AluSp SINE Alu 2 306 -7 2518 59 3 0 chr17 11056254 11056557 -78447996 - AluSq SINE Alu -9 304 1 724 273 65 29 chr17 11057458 11057506 -78447047 - L1ME4a LINE L1 -126 5995 5950 1658 114 0 4 chr17 11057506 11057743 -78446810 - AluSc SINE Alu -1 308 73 2289 95 7 0 chr17 11057744 11058039 -78446514 - AluSc SINE Alu -12 297 1 724 273 65 29 chr17 11058039 11058372 -78446181 - L1ME4a LINE L1 -170 5951 5598 2044 116 36 13 chr17 11058927 11059229 -78445324 + AluSc SINE Alu 1 309 0 795 239 46 35 chr17 11059248 11059350 -78445203 + L1M4 LINE L1 4317 4416 -1730 2407 92 0 0 chr17 11059350 11059653 -78444900 + AluSg SINE Alu 1 303 -7 795 239 46 35 chr17 11059653 11059834 -78444719 + L1M4 LINE L1 4416 4603 -1543 2719 213 84 44 chr17 11059936 11061068 -78443485 - L1ME1 LINE L1 -5 6161 4991 1363 248 48 83 chr17 11061353 11061512 -78443041 + L2 LINE L2 2474 2637 -676 1971 132 0 32 chr17 11061512 11061823 -78442730 - AluJb SINE Alu -7 305 5 1363 248 48 83 chr17 11061823 11062305 -78442248 + L2 LINE L2 2637 3075 -238 2524 44 0 0 chr17 11062305 11062599 -78441954 + AluY SINE Alu 1 294 -17 1363 248 48 83 chr17 11062599 11062830 -78441723 + L2 LINE L2 3075 3313 0 1998 138 0 0 chr17 11064169 11064472 -78440081 + AluSx SINE Alu 1 303 0 460 329 111 9 chr17 11064904 11065120 -78439433 - MIR SINE MIR -19 243 6 426 239 52 58 chr17 11066443 11066598 -78437955 + MER20B DNA MER1_type 1 154 -629 261 0 0 0 chr17 11066763 11066792 -78437761 + (T)n Simple_repeat Simple_repeat 1 29 0 320 269 23 39 chr17 11066813 11066943 -78437610 - L1ME4a LINE L1 -47 6074 5947 246 273 15 15 chr17 11067392 11067458 -78437095 + MIR SINE MIR 40 105 -103 753 301 64 4 chr17 11067467 11067703 -78436850 - MIR SINE MIR -12 250 1 26 30 0 0 chr17 11068436 11068469 -78436084 + AT_rich Low_complexity Low_complexity 1 33 0 286 208 145 38 chr17 11068571 11068730 -78435823 - L1ME4a LINE L1 0 6121 5946 467 271 231 8 chr17 11068786 11069037 -78435516 - L1ME4a LINE L1 -281 5840 5534 2122 86 22 59 chr17 11069841 11070165 -78434388 - AluSx SINE Alu 0 312 1 666 298 28 32 chr17 11070890 11071138 -78433415 + MIR SINE MIR 13 259 -3 381 162 0 0 chr17 11071722 11071790 -78432763 + (TA)n Simple_repeat Simple_repeat 1 68 0 1582 138 17 4 chr17 11071790 11072021 -78432532 - MER46A DNA MER2_type 0 236 3 227 53 0 26 chr17 11072021 11072059 -78432494 + (TG)n Simple_repeat Simple_repeat 2 38 0 2433 47 0 24 chr17 11072693 11072991 -78431562 + AluY SINE Alu 1 291 -20 388 319 76 32 chr17 11074814 11074999 -78429554 + MIR3 SINE MIR 15 207 -1 719 227 72 105 chr17 11075247 11075608 -78428945 - L1MC4 LINE L1 -1 8041 7693 21 0 0 0 chr17 11076260 11076281 -78428272 + AT_rich Low_complexity Low_complexity 1 21 0 252 86 0 0 chr17 11077498 11077533 -78427020 + (CA)n Simple_repeat Simple_repeat 2 36 0 184 300 210 0 chr17 11080073 11080173 -78424380 + MIR3 SINE MIR 65 185 -23 2041 129 0 0 chr17 11080330 11080644 -78423909 + AluSg SINE Alu 1 314 0 2283 105 7 0 chr17 11080715 11081010 -78423543 - AluSg SINE Alu -13 297 1 743 302 53 20 chr17 11081290 11081591 -78422962 + MARNA DNA Mariner 185 495 -91 242 275 225 22 chr17 11081493 11081631 -78422922 - MARNA DNA Mariner -399 187 22 * 1934 149 4 0 chr17 11082793 11083100 -78421453 + AluJb SINE Alu 1 308 0 24 32 0 0 chr17 11083186 11083217 -78421336 + AT_rich Low_complexity Low_complexity 1 31 0 2244 97 0 7 chr17 11083866 11084165 -78420388 + AluSc SINE Alu 1 297 -12 243 351 117 7 chr17 11084592 11084746 -78419807 - MIR3 SINE MIR -23 185 15 356 313 108 5 chr17 11084784 11084979 -78419574 + MIR SINE MIR 48 262 0 189 281 247 48 chr17 11085849 11085995 -78418558 + MIR3 SINE MIR 21 195 -13 4302 149 8 4 chr17 11088699 11089431 -78415122 - L1MB3 LINE L1 -2 6181 5447 703 206 37 16 chr17 11089459 11089648 -78414905 - L1MC5 LINE L1 -44 7917 7725 430 326 0 35 chr17 11089648 11089789 -78414764 - MIR3 SINE MIR -6 202 67 299 239 11 43 chr17 11091153 11091245 -78413308 + MIR SINE MIR 59 147 -61 2255 110 0 0 chr17 11091829 11092129 -78412424 - AluSq SINE Alu -13 300 1 22 0 0 0 chr17 11094039 11094061 -78410492 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr17 11095450 11095481 -78409072 + AT_rich Low_complexity Low_complexity 1 31 0 392 112 21 5 chr17 11095491 11095572 -78408981 - L1ME1 LINE L1 0 6184 6096 340 226 8 25 chr17 11095579 11095701 -78408852 - L1MD2 LINE L1 -26 6140 6040 23 54 0 0 chr17 11095955 11095992 -78408561 + AT_rich Low_complexity Low_complexity 1 37 0 601 191 33 33 chr17 11096072 11096224 -78408329 - L1MC5 LINE L1 -40 7921 7770 409 318 22 19 chr17 11096715 11097030 -78407523 - L1M4 LINE L1 -1490 4656 4341 299 224 13 26 chr17 11097122 11097198 -78407355 + MLT1J LTR MaLR 127 201 -310 330 284 90 15 chr17 11097475 11097676 -78406877 - L1M4 LINE L1 -1823 4323 4108 2683 161 30 34 chr17 11097854 11098388 -78406165 + L1MB7 LINE L1 5630 6161 -23 460 318 75 29 chr17 11098394 11098941 -78405612 - L1M4 LINE L1 -2202 3944 3373 246 251 0 62 chr17 11099009 11099188 -78405365 + T-rich Low_complexity Low_complexity 4 171 0 628 243 68 0 chr17 11099551 11099773 -78404780 - L1ME3A LINE L1 -215 5955 5719 1132 247 15 10 chr17 11099897 11100216 -78404337 - L1ME1 LINE L1 -5 6161 5841 824 214 48 24 chr17 11100345 11100593 -78403960 - L1ME1 LINE L1 -306 5860 5607 357 305 107 10 chr17 11100735 11101224 -78403329 + L1MC/D LINE L1 4724 5324 -846 477 0 0 0 chr17 11101224 11101277 -78403276 + (CA)n Simple_repeat Simple_repeat 2 54 0 357 305 107 10 chr17 11101277 11101534 -78403019 + L1MC/D LINE L1 5324 5555 -615 227 350 0 8 chr17 11102338 11102355 -78402198 - L1P4 LINE L1 -285 5878 5862 2489 231 120 25 chr17 11102355 11103560 -78400993 - L1MC4 LINE L1 -454 5708 4506 1008 232 23 26 chr17 11103562 11103872 -78400681 - L1MC4 LINE L1 -2057 4089 3781 2198 157 12 0 chr17 11103911 11104248 -78400305 + MER7A DNA MER2_type 8 346 0 354 189 81 0 chr17 11104259 11104333 -78400220 - L1M4c LINE L1 -2377 4580 4501 * 3779 210 41 33 chr17 11104324 11105453 -78399100 - L1M4c LINE L1 -2959 3998 2888 676 191 0 28 chr17 11105501 11105642 -78398911 - FLAM_C SINE Alu -2 141 5 388 268 56 82 chr17 11105655 11105886 -78398667 - L1M4c LINE L1 -4315 2823 2599 5391 257 63 39 chr17 11105943 11106288 -78398265 - L1M4c LINE L1 -4463 2675 2340 423 0 0 0 chr17 11106288 11106335 -78398218 + (TG)n Simple_repeat Simple_repeat 2 48 0 5391 257 63 39 chr17 11106335 11107254 -78397299 - L1M4c LINE L1 -4798 2340 1444 1282 167 0 12 chr17 11107254 11107500 -78397053 - L1MA4A LINE L1 -1 6302 6060 5391 257 63 39 chr17 11107500 11108713 -78395840 - L1M4c LINE L1 -5694 1444 1 5400 204 95 56 chr17 11108726 11110071 -78394482 - L1MDa LINE L1 -4149 2391 790 2327 126 25 3 chr17 11110071 11110427 -78394126 + THE1B LTR MaLR 1 364 0 5400 204 95 56 chr17 11110427 11111086 -78393467 - L1MDa LINE L1 -5750 790 158 1881 119 54 110 chr17 11111086 11111588 -78392965 - THE1C LTR MaLR 0 428 1 779 172 28 7 chr17 11111588 11111733 -78392820 - L1MDa LINE L1 -6378 162 15 1175 228 69 27 chr17 11111865 11112199 -78392354 - L2 LINE L2 0 3313 2966 212 324 165 23 chr17 11112341 11112517 -78392036 + MIR SINE MIR 61 261 -1 267 239 28 42 chr17 11112575 11112646 -78391907 - MIR3 SINE MIR -35 173 104 976 166 55 22 chr17 11112725 11112906 -78391647 + MER5A DNA MER1_type 3 189 0 2534 51 0 6 chr17 11113443 11113754 -78390799 - AluY SINE Alu -2 309 1 204 327 37 19 chr17 11115235 11115342 -78389211 + L2 LINE L2 2584 2692 -622 358 292 87 102 chr17 11115508 11115840 -78388713 + L2 LINE L2 2941 3267 -5 2142 117 30 3 chr17 11116412 11116710 -78387843 + AluSq SINE Alu 3 308 -5 283 229 33 16 chr17 11117018 11117079 -78387474 + MER69 DNA AcHobo 4 65 -112 497 191 167 0 chr17 11117218 11117344 -78387209 + MER69 DNA AcHobo 2380 2526 0 2570 62 0 0 chr17 11118518 11118824 -78385729 + AluY SINE Alu 1 306 -5 22 35 0 0 chr17 11118932 11118961 -78385592 + AT_rich Low_complexity Low_complexity 1 29 0 333 255 124 0 chr17 11119169 11119314 -78385239 - L1ME4a LINE L1 -204 5917 5755 273 362 0 9 chr17 11120220 11120336 -78384217 - MIR3 SINE MIR -13 195 81 367 338 60 15 chr17 11122315 11122448 -78382105 - MIR3 SINE MIR 0 208 70 21 0 0 0 chr17 11126342 11126363 -78378190 + AT_rich Low_complexity Low_complexity 1 21 0 287 350 25 17 chr17 11126871 11126991 -78377562 + MIR3 SINE MIR 38 158 -50 417 272 24 8 chr17 11129916 11130041 -78374512 + MIR3 SINE MIR 81 207 -1 2478 137 29 12 chr17 11136786 11137201 -78367352 - L1PA16 LINE L1 -11 6155 5734 2852 7 0 0 chr17 11138536 11138845 -78365708 - AluYa5 SINE Alu -2 309 1 23 0 0 0 chr17 11140325 11140348 -78364205 + AT_rich Low_complexity Low_complexity 1 23 0 419 301 23 29 chr17 11141450 11141623 -78362930 - MIR3 SINE MIR -9 199 28 190 314 47 12 chr17 11141652 11141738 -78362815 - MIR SINE MIR -142 120 32 23 54 0 0 chr17 11144542 11144579 -78359974 + AT_rich Low_complexity Low_complexity 1 37 0 1389 270 92 28 chr17 11144825 11145210 -78359343 - L2 LINE L2 0 3313 2954 2402 128 35 29 chr17 11145210 11145665 -78358888 + L1MA8 LINE L1 5831 6288 -3 1389 270 92 28 chr17 11145665 11145975 -78358578 - L2 LINE L2 -359 2954 2583 570 231 104 6 chr17 11145977 11146159 -78358394 - MLT1G LTR MaLR 0 590 391 1467 294 71 62 chr17 11146193 11147097 -78357456 - L2 LINE L2 -1541 1773 862 1320 254 35 0 chr17 11147099 11147473 -78357080 - L1M4 LINE L1 -2333 3813 3427 211 267 27 27 chr17 11147484 11147559 -78356994 - L2 LINE L2 -2448 866 792 332 296 159 56 chr17 11147824 11148094 -78356459 - L2 LINE L2 -67 3246 2949 591 303 32 23 chr17 11148132 11148350 -78356203 - MIR SINE MIR -18 244 25 405 167 0 0 chr17 11148362 11148440 -78356113 + CT-rich Low_complexity Low_complexity 3 80 0 1896 149 7 3 chr17 11148442 11148730 -78355823 - AluSx SINE Alu -21 291 3 253 184 41 0 chr17 11148748 11148797 -78355756 + L3 LINE CR1 1527 1577 0 263 237 36 65 chr17 11150243 11150382 -78354171 + (ATAGG)n Simple_repeat Simple_repeat 4 138 0 266 265 16 65 chr17 11150587 11150772 -78353781 + (ATAAG)n Simple_repeat Simple_repeat 2 177 0 244 326 54 31 chr17 11151204 11151333 -78353220 - L2 LINE L2 0 3313 3182 2041 299 129 40 chr17 11151465 11152657 -78351896 - L2 LINE L2 -529 2785 1488 23 33 0 0 chr17 11152746 11152776 -78351777 + AT_rich Low_complexity Low_complexity 1 30 0 482 120 100 0 chr17 11152776 11152876 -78351677 - L1MA9 LINE L1 -22 7709 7600 8345 228 36 73 chr17 11152879 11153717 -78350836 - L1MA9 LINE L1 -231 7500 6633 2799 91 8 3 chr17 11153717 11154090 -78350463 - THE1C LTR MaLR 0 375 1 9749 110 31 57 chr17 11154090 11155712 -78348841 - THE1C-int LTR MaLR 0 1580 1 2608 106 19 3 chr17 11155712 11156081 -78348472 - THE1C LTR MaLR 0 375 1 8345 228 36 73 chr17 11156081 11156547 -78348006 - L1MA9 LINE L1 -1096 6635 6153 1550 119 91 163 chr17 11156547 11157008 -78347545 - THE1C LTR MaLR 0 428 1 8345 228 36 73 chr17 11157008 11157347 -78347206 - L1MA9 LINE L1 -1578 6153 5803 2151 136 87 8 chr17 11157347 11157738 -78346815 - MSTA LTR MaLR 0 428 7 5519 131 38 46 chr17 11157738 11158818 -78345735 - MER11C LTR ERVK 0 1071 1 8345 228 36 73 chr17 11158818 11161557 -78342996 - L1MA9 LINE L1 -1926 5805 3033 1232 178 160 53 chr17 11161559 11161985 -78342568 - AluSx SINE Alu 0 456 1 2415 243 42 15 chr17 11161985 11162969 -78341584 - L1M2 LINE L1 -4194 2655 1646 615 330 137 33 chr17 11162971 11163708 -78340845 - L2 LINE L2 -2185 1129 316 23 0 0 0 chr17 11165478 11165501 -78339052 + AT_rich Low_complexity Low_complexity 1 23 0 216 86 0 0 chr17 11165614 11165649 -78338904 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 242 297 168 40 chr17 11165953 11166054 -78338499 - MIR3 SINE MIR -6 202 89 1121 293 165 25 chr17 11166326 11166961 -78337592 + L2 LINE L2 2250 2973 -341 2518 50 0 0 chr17 11168251 11168548 -78336005 + AluY SINE Alu 1 297 -14 21 0 0 0 chr17 11168590 11168611 -78335942 + AT_rich Low_complexity Low_complexity 1 21 0 276 305 76 0 chr17 11169583 11169688 -78334865 + L2 LINE L2 3167 3279 -34 23 33 0 0 chr17 11172533 11172563 -78331990 + AT_rich Low_complexity Low_complexity 1 30 0 191 254 169 51 chr17 11172899 11173017 -78331536 + MIR SINE MIR 90 221 -41 328 235 140 29 chr17 11173130 11173266 -78331287 + L1MC4 LINE L1 6609 6759 -1283 21 36 0 0 chr17 11175470 11175498 -78329055 + AT_rich Low_complexity Low_complexity 1 28 0 2392 110 0 0 chr17 11179254 11179564 -78324989 - AluSx SINE Alu -2 310 1 2149 135 3 0 chr17 11179837 11180134 -78324419 - AluSx SINE Alu -14 298 1 2286 92 30 3 chr17 11180778 11181083 -78323470 - AluSq SINE Alu 0 313 1 362 321 28 0 chr17 11181586 11181695 -78322858 - L2 LINE L2 -2 3311 3200 414 335 71 33 chr17 11181721 11181903 -78322650 + MER5A DNA MER1_type 1 189 0 1821 69 118 0 chr17 11182658 11182920 -78321633 + L1PA13 LINE L1 5852 6144 -19 673 320 74 4 chr17 11183068 11183299 -78321254 - MIR SINE MIR -3 259 13 1288 178 109 0 chr17 11183423 11183726 -78320827 + L1MB7 LINE L1 5849 6184 0 331 221 0 18 chr17 11184383 11184455 -78320098 - MIR SINE MIR -119 89 20 182 355 0 0 chr17 11187076 11187138 -78317415 - L2 LINE L2 -5 3267 3206 239 341 182 18 chr17 11188482 11188652 -78315901 + MIR3 SINE MIR 2 199 -9 264 289 62 39 chr17 11189817 11189945 -78314608 + L2 LINE L2 3137 3267 -5 204 179 0 0 chr17 11190462 11190501 -78314052 + (TG)n Simple_repeat Simple_repeat 2 40 0 210 71 0 0 chr17 11191755 11191783 -78312770 + (T)n Simple_repeat Simple_repeat 1 28 0 23 33 0 0 chr17 11192160 11192190 -78312363 + AT_rich Low_complexity Low_complexity 1 30 0 370 274 158 20 chr17 11192390 11192536 -78312017 - MIR3 SINE MIR -41 167 2 240 163 0 0 chr17 11194354 11194397 -78310156 + (CATA)n Simple_repeat Simple_repeat 2 44 0 235 326 7 7 chr17 11194800 11194938 -78309615 - L1 LINE L1 -2417 3729 3592 604 315 106 58 chr17 11195011 11195681 -78308872 - L1 LINE L1 -2709 3437 2736 887 260 166 19 chr17 11198761 11199134 -78305419 - L2 LINE L2 -1 3312 2885 349 312 43 0 chr17 11199148 11199289 -78305264 + L2 LINE L2 3161 3307 -6 1407 94 0 16 chr17 11200805 11200997 -78303556 - AluSc SINE Alu -1 308 120 284 337 20 92 chr17 11201198 11201394 -78303159 + MIR SINE MIR 29 210 -52 186 333 0 0 chr17 11203151 11203214 -78301339 - L2 LINE L2 -219 3053 2991 958 215 0 31 chr17 11204840 11205035 -78299518 - MER5A DNA MER1_type 0 189 1 252 260 23 68 chr17 11205287 11205464 -78299089 - MER112 DNA MER1_type -61 199 31 621 238 19 31 chr17 11207119 11207279 -78297274 + MIR SINE MIR 59 216 -46 22 35 0 0 chr17 11207369 11207398 -78297155 + AT_rich Low_complexity Low_complexity 1 29 0 2211 117 0 0 chr17 11207406 11207697 -78296856 + AluSx SINE Alu 1 291 -21 990 40 8 0 chr17 11208969 11209094 -78295459 + L1PB1 LINE L1 6025 6150 -1 2225 59 0 15 chr17 11211162 11211432 -78293121 + AluY SINE Alu 32 297 -14 229 228 193 9 chr17 11211433 11211547 -78293006 + L1ME4a LINE L1 5987 6121 0 6672 113 19 29 chr17 11213556 11214638 -78289915 + MER11C LTR ERVK 1 1071 0 1980 128 3 3 chr17 11214763 11215071 -78289482 + AluSx SINE Alu 1 308 0 631 249 72 37 chr17 11215108 11215509 -78289044 + L1ME4a LINE L1 5691 6105 -16 22 0 0 0 chr17 11215960 11215982 -78288571 + AT_rich Low_complexity Low_complexity 1 22 0 625 103 48 40 chr17 11216125 11216251 -78288302 + L1MA7 LINE L1 6165 6291 0 204 163 0 0 chr17 11217761 11217804 -78286749 + (TG)n Simple_repeat Simple_repeat 2 44 0 1347 158 0 14 chr17 11218347 11218562 -78285991 - AluJb SINE Alu -23 289 78 303 28 0 0 chr17 11219028 11219064 -78285489 + (TA)n Simple_repeat Simple_repeat 2 37 0 407 332 71 42 chr17 11219235 11219473 -78285080 - L2 LINE L2 -5 3267 3023 2057 113 0 36 chr17 11219569 11219871 -78284682 + AluSx SINE Alu 1 291 -21 345 307 20 0 chr17 11220965 11221066 -78283487 + MIR SINE MIR 44 146 -62 2318 91 0 3 chr17 11224387 11224685 -78279868 - AluY SINE Alu -14 297 1 524 212 123 47 chr17 11225471 11225641 -78278912 + MIR SINE MIR 47 229 -33 1533 109 0 0 chr17 11226025 11226226 -78278327 + AluSq SINE Alu 1 201 -112 22 0 0 0 chr17 11226226 11226248 -78278305 + AT_rich Low_complexity Low_complexity 1 22 0 6641 18 1 0 chr17 11226248 11227047 -78277506 - L1PA4 LINE L1 -3 6152 5353 728 93 9 19 chr17 11227047 11227155 -78277398 + AluSc SINE Alu 189 295 -14 230 224 24 12 chr17 11227789 11227874 -78276679 + (TA)n Simple_repeat Simple_repeat 2 87 0 278 299 36 67 chr17 11229015 11229239 -78275314 - L2 LINE L2 -215 3057 2841 871 150 0 36 chr17 11229698 11229838 -78274715 + AluJo SINE Alu 5 139 -173 22 0 0 0 chr17 11231298 11231320 -78273233 + AT_rich Low_complexity Low_complexity 1 22 0 2031 125 7 10 chr17 11231330 11231618 -78272935 + AluSx SINE Alu 13 299 -13 241 122 0 0 chr17 11231663 11231704 -78272849 + MLT2B1 LTR ERVL 1 41 -479 271 152 0 0 chr17 11231736 11231782 -78272771 + MLT2C1 LTR ERVL 350 395 -2 339 164 15 0 chr17 11231784 11231851 -78272702 - Charlie4 DNA MER1_type -1786 175 108 245 254 60 15 chr17 11232155 11232221 -78272332 + MER5B DNA MER1_type 1 69 -109 775 196 137 12 chr17 11232221 11232389 -78272164 + MER5A DNA MER1_type 1 189 0 354 322 9 9 chr17 11232460 11232575 -78271978 + L2 LINE L2 3198 3312 -1 2060 110 31 0 chr17 11232849 11233141 -78271412 - AluSq SINE Alu -12 301 1 209 297 139 59 chr17 11233525 11233727 -78270826 + L2 LINE L2 3093 3310 -3 2389 87 0 0 chr17 11233786 11234085 -78270468 + AluSg SINE Alu 2 300 -10 223 271 24 59 chr17 11234137 11234222 -78270331 + MIR SINE MIR 31 112 -150 1580 253 56 3 chr17 11235112 11235488 -78269065 + MSTD LTR MaLR 1 396 0 230 109 0 22 chr17 11235546 11235592 -78268961 - LTR66 LTR ERVL -175 435 391 4538 118 69 12 chr17 11235637 11236386 -78268167 - Tigger3(Golem) DNA MER2_type -1 3028 2237 614 128 24 128 chr17 11236381 11236427 -78268126 - Tigger3(Golem) DNA MER2_type -490 112 63 * 2192 96 0 57 chr17 11236427 11236741 -78267812 - AluSg SINE Alu -14 296 1 614 128 24 128 chr17 11236741 11236819 -78267734 - Tigger3(Golem) DNA MER2_type -539 63 1 1949 87 0 0 chr17 11237884 11238125 -78266428 + AluSq SINE Alu 1 241 -72 2458 212 56 18 chr17 11238165 11238770 -78265783 - L1ME1 LINE L1 -285 5881 5225 1092 196 0 6 chr17 11238770 11238949 -78265604 + MER45A DNA AcHobo 1 178 0 2458 212 56 18 chr17 11238949 11239209 -78265344 - L1ME1 LINE L1 -941 5225 4976 391 292 60 11 chr17 11239231 11239498 -78265055 - L1ME1 LINE L1 -1535 4611 4332 312 294 77 41 chr17 11239857 11240027 -78264526 - MLT1L LTR MaLR -2 613 438 2559 185 47 4 chr17 11240035 11240543 -78264010 - L1MD3 LINE L1 0 7995 7466 892 204 75 35 chr17 11240589 11240844 -78263709 - L1MC5 LINE L1 -36 7925 7661 316 318 45 68 chr17 11240862 11241126 -78263427 - MLT1J LTR MaLR -154 357 100 1925 117 7 21 chr17 11241506 11241788 -78262765 + AluSx SINE Alu 1 278 -34 653 215 7 0 chr17 11241992 11242127 -78262426 - MER104 DNA Tc2 -44 136 1 797 266 66 11 chr17 11242183 11242454 -78262099 - L1ME3 LINE L1 0 6164 5879 229 185 25 62 chr17 11242466 11242547 -78262006 + L1MC/D LINE L1 5853 5930 -1878 473 216 123 112 chr17 11242628 11242897 -78261656 + L2 LINE L2 3042 3313 0 2380 231 56 31 chr17 11242962 11243312 -78261241 - L1ME2 LINE L1 -70 6235 5895 2274 97 0 3 chr17 11243312 11243612 -78260941 + AluSx SINE Alu 1 299 -13 2380 231 56 31 chr17 11243612 11244077 -78260476 - L1ME2 LINE L1 -410 5895 5315 597 94 0 0 chr17 11244083 11244168 -78260385 + (TA)n Simple_repeat Simple_repeat 2 86 0 317 276 92 0 chr17 11244374 11244472 -78260081 - MIR SINE MIR -138 124 18 1522 166 92 142 chr17 11244680 11245121 -78259432 + LTR49 LTR ERV1 5 408 -187 2443 40 7 3 chr17 11245121 11245417 -78259136 + AluY SINE Alu 1 297 -14 1522 166 92 142 chr17 11245417 11245597 -78258956 + LTR49 LTR ERV1 408 595 0 727 273 151 61 chr17 11246074 11246334 -78258219 - MLT1K LTR MaLR -108 480 174 954 156 44 0 chr17 11246334 11246514 -78258039 - MER53 DNA DNA 0 189 2 727 273 151 61 chr17 11246514 11246631 -78257922 - MLT1K LTR MaLR -414 174 69 1726 158 103 41 chr17 11247266 11247574 -78256979 - MLT2D LTR ERVL -2 518 82 1861 140 13 13 chr17 11247574 11247874 -78256679 + AluJo SINE Alu 1 300 -12 1726 158 103 41 chr17 11247874 11247962 -78256591 - MLT2D LTR ERVL -438 82 1 1648 198 0 22 chr17 11248270 11248589 -78255964 + AluJo SINE Alu 1 312 0 2482 82 0 0 chr17 11249661 11249967 -78254586 - AluY SINE Alu -5 306 1 202 295 82 0 chr17 11250008 11250069 -78254484 - L3 LINE CR1 -4 1573 1508 582 104 125 0 chr17 11250082 11250178 -78254375 - L1MC2 LINE L1 -187 6157 6050 350 284 10 0 chr17 11250375 11250477 -78254076 + MER46C DNA MER2_type 235 337 -1 860 208 46 83 chr17 11250485 11250725 -78253828 - MER46C DNA MER2_type -106 232 2 446 77 0 0 chr17 11250774 11250839 -78253714 + Alu SINE Alu 246 310 -2 2301 105 20 0 chr17 11250840 11251146 -78253407 + AluSx SINE Alu 1 312 0 2373 81 3 0 chr17 11251284 11251582 -78252971 + AluSp SINE Alu 5 303 -10 274 335 36 24 chr17 11251608 11251775 -78252778 - MLT1K LTR MaLR -17 571 403 376 274 30 15 chr17 11252564 11252699 -78251854 - L1ME3A LINE L1 -5 6165 6029 2482 79 0 3 chr17 11253259 11253564 -78250989 - AluSx SINE Alu -8 304 1 3768 150 8 22 chr17 11254304 11254348 -78250205 - L1MB1 LINE L1 -5 6163 6120 2189 113 0 42 chr17 11254348 11254659 -78249894 - AluSx SINE Alu -14 298 1 3768 150 8 22 chr17 11254659 11255235 -78249318 - L1MB1 LINE L1 -48 6120 5552 422 333 33 22 chr17 11256997 11257273 -78247280 + L1ME LINE L1 5518 5796 -325 208 306 139 0 chr17 11257338 11257410 -78247143 + L2 LINE L2 3203 3284 -29 2080 97 35 3 chr17 11258823 11259112 -78245441 - AluSq SINE Alu -15 298 1 352 120 67 13 chr17 11259143 11259218 -78245335 - L1MC2 LINE L1 -11 6333 6255 1439 155 73 0 chr17 11259232 11259477 -78245076 - AluJo SINE Alu -44 268 6 283 142 0 0 chr17 11259477 11259534 -78245019 - Alu SINE Alu -268 40 2 8236 167 92 66 chr17 11259534 11259970 -78244583 - L1MC3 LINE L1 -109 7676 7253 264 269 21 11 chr17 11259970 11260063 -78244490 - MLT1F1 LTR MaLR -434 133 40 8236 167 92 66 chr17 11260063 11260254 -78244299 - L1MC3 LINE L1 -532 7253 7068 2151 117 7 0 chr17 11260254 11260554 -78243999 - AluSx SINE Alu -10 302 1 8236 167 92 66 chr17 11260554 11261811 -78242742 - L1MC3 LINE L1 -717 7068 5648 2130 86 7 0 chr17 11261955 11262261 -78242292 - AluY SINE Alu 0 308 1 1986 154 0 10 chr17 11262883 11263188 -78241365 + AluJb SINE Alu 1 302 -10 2370 86 3 0 chr17 11263658 11263960 -78240593 - AluY SINE Alu -8 303 1 2255 88 0 3 chr17 11264116 11264423 -78240130 - AluSq SINE Alu 0 306 1 2154 123 3 3 chr17 11264838 11265140 -78239413 + AluSx SINE Alu 1 302 -10 532 178 225 0 chr17 11265368 11265497 -78239056 + MER5A DNA MER1_type 3 160 -29 857 159 144 55 chr17 11266192 11266393 -78238160 - MER20 DNA MER1_type 0 219 1 3365 204 24 32 chr17 11266639 11267296 -78237257 - MER82 DNA MER2_type -1 652 1 2213 107 0 3 chr17 11268060 11268351 -78236202 - AluSg SINE Alu -20 290 1 339 283 133 6 chr17 11268579 11268759 -78235794 - MIR SINE MIR -13 249 47 613 264 29 23 chr17 11268993 11269053 -78235500 - MER5B DNA MER1_type -3 175 117 1848 110 8 0 chr17 11269053 11269323 -78235230 + AluSx SINE Alu 37 308 0 613 264 29 23 chr17 11269323 11269435 -78235118 - MER5B DNA MER1_type -61 117 1 919 239 27 0 chr17 11269481 11269665 -78234888 + MER5A DNA MER1_type 1 189 0 368 212 61 0 chr17 11269671 11269770 -78234783 + L1MC4a LINE L1 5337 5441 -918 2343 89 3 3 chr17 11269770 11270074 -78234479 + AluSx SINE Alu 1 304 -8 1276 110 0 0 chr17 11270074 11270237 -78234316 + AluSg/x SINE Alu 132 294 -16 400 312 59 86 chr17 11270240 11270475 -78234078 + L1MC4a LINE L1 5431 5648 -2160 1784 176 0 3 chr17 11270475 11270765 -78233788 + AluSx SINE Alu 20 308 -4 400 312 59 86 chr17 11270765 11271004 -78233549 + L1MC4a LINE L1 5648 5892 -1916 213 261 112 45 chr17 11272364 11272498 -78232055 + L2 LINE L2 2804 2946 -326 745 274 163 26 chr17 11272724 11273074 -78231479 - L2 LINE L2 -10 3303 2906 2255 122 0 0 chr17 11274073 11274376 -78230177 + AluSq SINE Alu 1 303 -10 269 315 86 50 chr17 11275968 11276247 -78228306 - L2 LINE L2 -159 3113 2825 421 328 25 66 chr17 11276398 11276642 -78227911 + MIR SINE MIR 20 253 -9 737 130 0 0 chr17 11277193 11277293 -78227260 + FLAM_C SINE Alu 26 125 -18 1408 142 49 4 chr17 11277315 11277541 -78227012 - L1MC1 LINE L1 -2 6331 6096 233 234 13 26 chr17 11278239 11278316 -78226237 + GA-rich Low_complexity Low_complexity 1 76 0 24 32 0 0 chr17 11278737 11278768 -78225785 + AT_rich Low_complexity Low_complexity 1 31 0 1731 183 0 10 chr17 11278773 11279063 -78225490 + AluJo SINE Alu 1 287 -25 201 33 83 33 chr17 11279065 11279125 -78225428 + (TTAA)n Simple_repeat Simple_repeat 2 64 0 30 69 0 0 chr17 11279438 11279496 -78225057 + AT_rich Low_complexity Low_complexity 1 58 0 948 172 0 0 chr17 11279496 11279641 -78224912 - FRAM SINE Alu -31 145 1 264 268 52 10 chr17 11279855 11279952 -78224601 - L1MC4 LINE L1 -15 8027 7927 570 141 9 9 chr17 11280142 11280368 -78224185 + (TA)n Simple_repeat Simple_repeat 1 226 0 551 269 27 36 chr17 11280380 11280646 -78223907 - L1ME3 LINE L1 -303 5818 5599 2297 113 0 0 chr17 11281653 11281955 -78222598 + AluSx SINE Alu 1 302 -10 328 272 8 80 chr17 11282108 11282175 -78222378 + MIR3 SINE MIR 93 148 -60 391 261 5 116 chr17 11282175 11282309 -78222244 + MER5B DNA MER1_type 1 108 -70 2418 80 3 0 chr17 11282309 11282608 -78221945 - AluSp SINE Alu -13 300 1 391 261 5 116 chr17 11282608 11282672 -78221881 + MER5B DNA MER1_type 108 177 -1 328 272 8 80 chr17 11282672 11282729 -78221824 + MIR3 SINE MIR 148 208 0 486 222 77 26 chr17 11282849 11282966 -78221587 + L2 LINE L2 3148 3270 -2 2296 72 24 0 chr17 11283208 11283498 -78221055 - AluSx SINE Alu -15 297 1 2345 48 4 0 chr17 11284688 11284956 -78219597 + AluY SINE Alu 39 307 -4 432 0 0 0 chr17 11285063 11285111 -78219442 + (TG)n Simple_repeat Simple_repeat 2 49 0 1217 166 50 22 chr17 11285572 11285850 -78218703 - L1MB7 LINE L1 -11 6173 5888 239 167 62 0 chr17 11287029 11287077 -78217476 + L2 LINE L2 3257 3307 -6 309 202 11 35 chr17 11287773 11287875 -78216678 - MIR SINE MIR -64 144 91 1662 145 7 35 chr17 11287887 11288177 -78216376 + AluJb SINE Alu 1 282 -30 503 69 14 0 chr17 11288177 11288249 -78216304 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 304 325 79 50 chr17 11288487 11288767 -78215786 + L3 LINE CR1 1179 1466 -111 1397 130 38 61 chr17 11288812 11288962 -78215591 + AluJb SINE Alu 1 153 -159 2486 43 13 20 chr17 11288962 11289262 -78215291 + AluY SINE Alu 1 298 -13 237 33 0 0 chr17 11289266 11289296 -78215257 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 1397 130 38 61 chr17 11289296 11289401 -78215152 + AluJb SINE Alu 156 255 -57 656 204 34 40 chr17 11289518 11289694 -78214859 - MER5B DNA MER1_type -3 175 1 695 169 38 172 chr17 11290356 11290436 -78214117 + MER96B DNA MER1_type? 5 94 -323 2515 76 0 6 chr17 11290436 11290750 -78213803 + AluSx SINE Alu 1 312 0 695 169 38 172 chr17 11290750 11290936 -78213617 + MER96B DNA MER1_type? 94 235 -182 307 28 0 0 chr17 11291076 11291112 -78213441 + AluY SINE Alu 12 47 -254 2588 33 17 0 chr17 11291566 11291865 -78212688 - AluY SINE Alu -7 304 1 2643 59 0 0 chr17 11291873 11292179 -78212374 - AluY SINE Alu -5 306 1 271 0 51 0 chr17 11292189 11292228 -78212325 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 2174 104 37 0 chr17 11292261 11292558 -78211995 - AluSc SINE Alu -1 308 1 180 152 0 0 chr17 11292624 11292657 -78211896 + CT-rich Low_complexity Low_complexity 1 33 0 2278 132 0 0 chr17 11292657 11292968 -78211585 - AluSx SINE Alu -1 311 1 189 121 0 0 chr17 11293235 11293268 -78211285 + (A)n Simple_repeat Simple_repeat 1 33 0 787 229 11 21 chr17 11293323 11293511 -78211042 + MER5A DNA MER1_type 4 189 0 375 295 181 0 chr17 11293522 11293671 -78210882 - MER5A DNA MER1_type -3 186 11 322 302 52 9 chr17 11293703 11293819 -78210734 - MER5A DNA MER1_type -10 179 59 398 239 25 86 chr17 11293854 11293976 -78210577 + MER5A DNA MER1_type 37 148 -41 2293 126 0 0 chr17 11293976 11294278 -78210275 + AluSg SINE Alu 1 302 -8 398 239 25 86 chr17 11294278 11294318 -78210235 + MER5A DNA MER1_type 148 189 0 2156 117 0 0 chr17 11294754 11295057 -78209496 + AluSg SINE Alu 1 303 0 2212 132 0 6 chr17 11298488 11298799 -78205754 + AluSx SINE Alu 1 309 -3 234 197 287 23 chr17 11299204 11299298 -78205255 + MIR SINE MIR 42 149 -63 2497 75 0 0 chr17 11299891 11300186 -78204367 - AluSc SINE Alu -14 295 1 787 233 47 50 chr17 11300186 11300319 -78204234 - L1MC5 LINE L1 -231 7730 7598 288 0 0 0 chr17 11300319 11300351 -78204202 + (TG)n Simple_repeat Simple_repeat 2 33 0 787 233 47 50 chr17 11300351 11300535 -78204018 - L1MC5 LINE L1 -363 7598 7414 190 333 128 10 chr17 11300832 11300934 -78203619 + L2 LINE L2 3151 3264 -8 2840 53 11 5 chr17 11301795 11302175 -78202378 - L1PA8 LINE L1 -10 6162 5781 264 302 206 0 chr17 11302190 11302316 -78202237 + MIR3 SINE MIR 32 183 -25 2267 95 0 38 chr17 11303339 11303654 -78200899 + AluSq SINE Alu 1 303 -10 1741 187 11 0 chr17 11304860 11305190 -78199363 - AluJb SINE Alu 0 333 1 2136 106 42 0 chr17 11305701 11305984 -78198569 + AluSq SINE Alu 1 295 -18 405 261 56 21 chr17 11307411 11307553 -78197000 - MIR3 SINE MIR -28 180 34 254 311 57 19 chr17 11308651 11308757 -78195796 - L2 LINE L2 -1 3271 3162 1877 101 8 0 chr17 11308814 11309052 -78195501 + AluSg SINE Alu 1 240 -70 189 0 0 0 chr17 11309060 11309081 -78195472 + (A)n Simple_repeat Simple_repeat 1 21 0 2362 85 0 7 chr17 11309405 11309699 -78194854 + AluSg SINE Alu 1 292 -18 2509 78 0 0 chr17 11309835 11310131 -78194422 - AluSq SINE Alu -17 296 1 191 273 0 0 chr17 11312003 11312047 -78192506 + L3 LINE CR1 1530 1573 -4 454 343 64 6 chr17 11313480 11313652 -78190901 - MIR3 SINE MIR -10 198 17 2348 108 0 0 chr17 11314280 11314585 -78189968 - AluY SINE Alu -6 305 1 2464 90 0 0 chr17 11316145 11316445 -78188108 - AluSc SINE Alu -9 300 1 2298 113 10 0 chr17 11316649 11316951 -78187602 + AluSx SINE Alu 1 305 -7 686 130 19 0 chr17 11317816 11317924 -78186629 - AluSx SINE Alu -17 293 184 2059 119 18 7 chr17 11317924 11318202 -78186351 + AluSx SINE Alu 1 281 -31 1462 99 26 0 chr17 11318202 11318394 -78186159 - AluSx SINE Alu -115 197 1 1914 164 0 7 chr17 11319543 11319847 -78184706 + AluJb SINE Alu 7 308 -4 2481 54 0 0 chr17 11320300 11320613 -78183940 - AluSc SINE Alu 0 314 2 610 345 47 12 chr17 11320690 11321286 -78183267 + L2 LINE L2 2624 3234 -79 2354 89 3 0 chr17 11321455 11321746 -78182807 - AluSp SINE Alu -21 292 1 2412 82 0 16 chr17 11322731 11323047 -78181506 - AluY SINE Alu 0 311 1 1310 176 40 0 chr17 11323341 11323613 -78180940 - L1MA7 LINE L1 0 6291 6009 2273 105 7 0 chr17 11323678 11323974 -78180579 + AluSg SINE Alu 1 298 -12 2469 91 3 0 chr17 11324504 11324812 -78179741 - AluSc SINE Alu 0 309 1 244 309 139 6 chr17 11324814 11324979 -78179574 - MIR SINE MIR -55 207 21 2730 55 0 0 chr17 11325381 11325692 -78178861 - AluY SINE Alu 0 311 1 620 91 0 30 chr17 11326732 11326831 -78177722 - AluY SINE Alu -18 293 198 564 141 25 8 chr17 11326907 11327028 -78177525 + CT-rich Low_complexity Low_complexity 2 124 0 2237 108 7 0 chr17 11328433 11328721 -78175832 - AluSg SINE Alu -20 290 1 2239 113 0 35 chr17 11329015 11329333 -78175220 + AluSq SINE Alu 1 307 -6 27 0 0 0 chr17 11330584 11330611 -78173942 + AT_rich Low_complexity Low_complexity 1 27 0 265 254 0 28 chr17 11330619 11330690 -78173863 + CT-rich Low_complexity Low_complexity 5 73 0 342 367 38 38 chr17 11332792 11333029 -78171524 + MIR SINE MIR 20 256 -6 2413 74 0 7 chr17 11333165 11333462 -78171091 + AluY SINE Alu 1 295 -16 2133 114 0 14 chr17 11333470 11333751 -78170802 + AluSx SINE Alu 1 277 -35 2310 118 0 0 chr17 11333751 11334048 -78170505 - AluSp SINE Alu -16 297 1 261 0 0 0 chr17 11334061 11334090 -78170463 + (A)n Simple_repeat Simple_repeat 1 29 0 2076 157 0 0 chr17 11334781 11335093 -78169460 - AluSx SINE Alu 0 312 1 385 292 99 69 chr17 11335099 11335534 -78169019 - L1MC4 LINE L1 0 8042 7595 2215 128 0 0 chr17 11335576 11335911 -78168642 + AluSx SINE Alu 1 310 -2 208 256 83 107 chr17 11335913 11336034 -78168519 - L2 LINE L2 -21 3251 3134 2424 102 0 0 chr17 11336552 11336857 -78167696 + AluSx SINE Alu 1 305 -7 439 314 17 11 chr17 11337018 11337193 -78167360 - MIR SINE MIR -63 199 24 2357 110 0 0 chr17 11337902 11338212 -78166341 - AluSx SINE Alu 0 312 3 207 250 21 0 chr17 11338251 11338299 -78166254 + MER5B DNA MER1_type 1 49 -129 737 279 139 27 chr17 11338333 11339034 -78165519 + L1MC4a LINE L1 4390 5167 -979 930 202 35 0 chr17 11339069 11339242 -78165311 + AluJo SINE Alu 1 179 -133 1500 155 30 69 chr17 11339242 11339546 -78165007 + AluJo SINE Alu 12 303 -9 1785 255 114 41 chr17 11339605 11340171 -78164382 + L1MC4a LINE L1 5260 5894 -1914 2121 129 3 3 chr17 11340171 11340473 -78164080 + AluSx SINE Alu 1 302 -10 1785 255 114 41 chr17 11340473 11340642 -78163911 + L1MC4a LINE L1 5894 6049 -1759 448 220 114 59 chr17 11340646 11340882 -78163671 + L1MC4a LINE L1 6108 6356 -1452 2041 120 0 0 chr17 11340884 11341160 -78163393 + AluSx SINE Alu 1 276 -36 222 91 0 0 chr17 11341161 11341194 -78163359 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 287 241 21 50 chr17 11341345 11341486 -78163067 + L1MC5 LINE L1 7605 7741 -220 404 233 104 25 chr17 11341554 11341717 -78162836 - L1M LINE L1 -2379 5429 5254 237 292 33 50 chr17 11341758 11341878 -78162675 - MIR SINE MIR -66 196 79 295 150 0 208 chr17 11341997 11342042 -78162511 + MIR3 SINE MIR 113 166 -42 2264 89 0 45 chr17 11342042 11342356 -78162197 + AluSx SINE Alu 1 300 -12 295 150 0 208 chr17 11342356 11342393 -78162160 + MIR3 SINE MIR 166 166 -42 1948 160 0 22 chr17 11342393 11342711 -78161842 + AluJo SINE Alu 1 311 -1 295 150 0 208 chr17 11342711 11342747 -78161806 + MIR3 SINE MIR 165 207 -1 673 203 0 23 chr17 11343243 11343376 -78161177 - FLAM_A SINE Alu 0 133 4 413 255 147 105 chr17 11343553 11343659 -78160894 - L1ME4a LINE L1 -254 5867 5767 2256 92 3 13 chr17 11343659 11343964 -78160589 - AluSx SINE Alu -10 302 1 413 255 147 105 chr17 11343964 11344210 -78160343 - L1ME4a LINE L1 -354 5767 5500 2497 48 0 3 chr17 11344344 11344636 -78159917 - AluY SINE Alu -6 305 15 628 186 93 21 chr17 11345261 11345401 -78159152 - L1ME1 LINE L1 -5 6161 6012 1981 94 0 0 chr17 11345764 11346019 -78158534 - AluSc SINE Alu 0 309 55 397 256 153 22 chr17 11346859 11346903 -78157650 - MER5A DNA MER1_type -21 168 131 2182 84 0 40 chr17 11346903 11347231 -78157322 + AluSq SINE Alu 1 316 0 397 256 153 22 chr17 11347231 11347322 -78157231 - MER5A DNA MER1_type -58 131 14 756 221 55 51 chr17 11348240 11348457 -78156096 - L1ME3 LINE L1 -10 6152 5935 2255 99 26 0 chr17 11348858 11349162 -78155391 - AluSp SINE Alu -1 312 1 230 228 173 24 chr17 11349226 11349353 -78155200 + L1MC5 LINE L1 7786 7931 -30 2198 102 3 13 chr17 11349796 11350109 -78154444 + AluSp SINE Alu 1 310 -3 2498 73 7 0 chr17 11350606 11350909 -78153644 + AluSp SINE Alu 1 305 -8 1844 152 72 35 chr17 11351523 11351727 -78152826 - MLT1B LTR MaLR 0 390 164 2204 99 0 7 chr17 11351727 11352019 -78152534 - AluSx SINE Alu -22 290 1 1844 152 72 35 chr17 11352019 11352189 -78152364 - MLT1B LTR MaLR -226 164 2 25 31 0 0 chr17 11352512 11352544 -78152009 + AT_rich Low_complexity Low_complexity 1 32 0 1376 185 32 50 chr17 11352570 11352851 -78151702 - AluJo SINE Alu -35 277 2 263 329 80 15 chr17 11352874 11353011 -78151542 + MER5A DNA MER1_type 7 152 -37 229 267 133 33 chr17 11355907 11356087 -78148466 - L1MC4a LINE L1 -1777 6031 5834 542 283 57 76 chr17 11356150 11356465 -78148088 - L1MC4a LINE L1 -2149 5659 5351 26 30 0 0 chr17 11356490 11356523 -78148030 + AT_rich Low_complexity Low_complexity 1 33 0 2013 119 0 44 chr17 11358717 11359036 -78145517 + AluSx SINE Alu 1 305 -7 2180 99 31 7 chr17 11359078 11359372 -78145181 + AluSx SINE Alu 1 301 -11 2241 197 55 5 chr17 11360820 11361562 -78142991 + L1ME LINE L1 5023 5834 -332 2829 10 0 0 chr17 11361606 11361911 -78142642 + AluYa5 SINE Alu 1 305 -6 507 242 94 1 chr17 11361926 11362105 -78142448 + L1MA10 LINE L1 5978 6330 -4 4206 155 35 6 chr17 11362465 11363825 -78140728 + L1MA5 LINE L1 4623 6017 -283 354 67 0 0 chr17 11363825 11363869 -78140684 + L1MA5 LINE L1 6249 6293 -7 2039 120 17 3 chr17 11363895 11364187 -78140366 - AluSx SINE Alu -16 296 1 193 327 0 0 chr17 11364315 11364370 -78140183 - MIR SINE MIR -124 84 30 194 273 26 52 chr17 11364515 11364592 -78139961 + MIR SINE MIR 124 198 -64 2453 223 224 64 chr17 11366173 11367167 -78137386 + L1MC4 LINE L1 6461 7743 -299 365 136 0 0 chr17 11367167 11367226 -78137327 + AluSp/q SINE Alu 243 301 -2 2453 223 224 64 chr17 11367226 11367412 -78137141 + L1MC4 LINE L1 7743 7898 -144 23 33 0 0 chr17 11367420 11367450 -78137103 + AT_rich Low_complexity Low_complexity 1 30 0 1280 174 41 0 chr17 11368193 11368435 -78136118 + L1MD3 LINE L1 7734 7985 -10 237 33 0 0 chr17 11368839 11368869 -78135684 + (A)n Simple_repeat Simple_repeat 1 30 0 2247 72 3 0 chr17 11368934 11369226 -78135327 + AluSq SINE Alu 1 293 -20 28 0 0 0 chr17 11371841 11371869 -78132684 + AT_rich Low_complexity Low_complexity 1 28 0 898 214 0 0 chr17 11371894 11372067 -78132486 + FRAM SINE Alu 1 173 -3 2116 103 0 37 chr17 11372282 11372603 -78131950 - AluSc SINE Alu 0 309 1 512 97 0 14 chr17 11373157 11373229 -78131324 + AluJb SINE Alu 40 110 -202 1595 144 0 47 chr17 11373279 11373557 -78130996 + AluJb SINE Alu 40 304 -8 23 0 0 0 chr17 11373720 11373743 -78130810 + AT_rich Low_complexity Low_complexity 1 23 0 2565 45 3 0 chr17 11374108 11374400 -78130153 - AluY SINE Alu -18 293 1 1269 117 66 5 chr17 11374764 11374961 -78129592 + MER46A DNA MER2_type 27 235 -1 431 299 53 24 chr17 11375137 11375344 -78129209 - MLT1K LTR MaLR 0 588 376 768 257 62 55 chr17 11375404 11375661 -78128892 - MLT1K LTR MaLR -328 260 2 287 163 0 0 chr17 11375692 11375741 -78128812 - MER103 DNA DNA -44 122 74 874 154 23 0 chr17 11376834 11376964 -78127589 + FLAM_A SINE Alu 1 133 0 189 0 0 0 chr17 11377258 11377279 -78127274 + (A)n Simple_repeat Simple_repeat 1 21 0 657 286 54 75 chr17 11378466 11378907 -78125646 - L2 LINE L2 -4 3309 2878 767 158 53 18 chr17 11379613 11379784 -78124769 - L1MD1 LINE L1 0 6242 6066 1385 118 5 25 chr17 11379944 11380178 -78124375 + AluSg/x SINE Alu 86 315 0 2478 70 7 0 chr17 11380920 11381222 -78123331 + AluSq SINE Alu 1 304 -9 457 275 56 7 chr17 11381516 11381658 -78122895 - MIR3 SINE MIR -24 184 36 1627 224 56 44 chr17 11381912 11382393 -78122160 - L2 LINE L2 -866 2448 1962 2300 109 0 0 chr17 11382879 11383173 -78121380 - AluSx SINE Alu -18 294 1 2005 213 57 32 chr17 11384758 11385250 -78119303 - MLT1D LTR MaLR -1 504 1 228 305 93 82 chr17 11385436 11385705 -78118848 - L2 LINE L2 -338 2976 2705 2348 104 0 0 chr17 11385760 11386058 -78118495 + AluSx SINE Alu 1 298 -14 30 45 0 0 chr17 11386059 11386103 -78118450 + AT_rich Low_complexity Low_complexity 1 44 0 1453 142 99 0 chr17 11386831 11387133 -78117420 - Charlie5 DNA MER1_type -46 2566 2235 1847 148 7 14 chr17 11387407 11387704 -78116849 + AluJb SINE Alu 1 295 -17 22 0 0 0 chr17 11388372 11388394 -78116159 + AT_rich Low_complexity Low_complexity 1 22 0 334 233 173 33 chr17 11388570 11388720 -78115833 - L1MEc LINE L1 -961 5465 5295 435 287 72 38 chr17 11389356 11389593 -78114960 - L1MEc LINE L1 -1119 5307 5063 4876 250 68 28 chr17 11389605 11390593 -78113960 - L1MEc LINE L1 -1630 4796 3849 2126 87 10 17 chr17 11390593 11390893 -78113660 - AluSq SINE Alu -15 298 1 4876 250 68 28 chr17 11390893 11391929 -78112624 - L1MEc LINE L1 -2577 3849 2659 2017 264 110 37 chr17 11391936 11392029 -78112524 + L1MC4a LINE L1 4900 4985 -1161 1972 78 37 0 chr17 11392029 11392336 -78112217 - AluSg SINE Alu 0 317 1 2017 264 110 37 chr17 11392336 11393436 -78111117 + L1MC4a LINE L1 4985 5397 -749 422 307 115 61 chr17 11393521 11393817 -78110736 + L1MC4a LINE L1 6309 6620 -1188 813 125 0 161 chr17 11393872 11394096 -78110457 + L1MC5 LINE L1 6756 6943 -1018 2282 94 13 0 chr17 11394098 11394406 -78110147 + AluSx SINE Alu 1 312 0 400 186 115 18 chr17 11394449 11394562 -78109991 + L1MC5 LINE L1 7808 7931 -30 429 262 62 55 chr17 11394624 11394757 -78109796 - L1MEc LINE L1 -3930 2677 2546 2189 100 0 7 chr17 11394757 11395066 -78109487 - AluSx SINE Alu -5 307 1 429 262 62 55 chr17 11395066 11395241 -78109312 - L1MEc LINE L1 -4061 2546 2367 345 310 7 13 chr17 11395261 11395416 -78109137 - L1MEc LINE L1 -4324 2283 2130 227 281 34 0 chr17 11395465 11395554 -78108999 - L1MEc LINE L1 -4513 1913 1822 1888 80 11 8 chr17 11395752 11396016 -78108537 - AluSc SINE Alu -10 299 35 2183 105 0 0 chr17 11397071 11397367 -78107186 + AluSg SINE Alu 1 296 -14 306 258 40 24 chr17 11398456 11398580 -78105973 + MLT1K LTR MaLR 460 585 -3 780 143 0 32 chr17 11399953 11400079 -78104474 - FLAM_A SINE Alu -11 122 1 211 312 84 52 chr17 11400120 11400370 -78104183 - L2 LINE L2 -829 2485 2228 2278 96 3 0 chr17 11400650 11400951 -78103602 + AluSp SINE Alu 1 302 -11 2105 111 0 13 chr17 11401066 11401382 -78103171 - AluSx SINE Alu 0 312 1 226 270 79 34 chr17 11401891 11401980 -78102573 - L2 LINE L2 -4 3309 3217 363 198 45 0 chr17 11402993 11403104 -78101449 + GA-rich Low_complexity Low_complexity 2 117 0 2220 60 13 13 chr17 11403104 11403406 -78101147 + AluSq SINE Alu 1 302 -11 405 0 0 0 chr17 11403444 11403489 -78101064 + (TG)n Simple_repeat Simple_repeat 2 46 0 2318 141 34 18 chr17 11404238 11404622 -78099931 + MLT1B LTR MaLR 1 390 0 2207 101 0 10 chr17 11404731 11405039 -78099514 - AluSg SINE Alu -5 305 1 538 325 64 65 chr17 11405060 11405642 -78098911 + MLT1K LTR MaLR 2 582 -6 435 347 104 20 chr17 11407263 11407609 -78096944 - L2 LINE L2 0 3313 2939 2234 101 3 0 chr17 11407718 11408015 -78096538 + AluSx SINE Alu 1 298 -14 352 295 110 39 chr17 11408016 11408270 -78096283 - L2 LINE L2 -534 2780 2509 1734 146 10 17 chr17 11408325 11408620 -78095933 + AluJo SINE Alu 1 293 -19 2291 92 0 7 chr17 11408942 11409248 -78095305 - AluSp SINE Alu -9 304 1 555 292 36 18 chr17 11409466 11409634 -78094919 - MIR SINE MIR -2 260 90 248 114 0 0 chr17 11410220 11410255 -78094298 - U2 snRNA snRNA -153 35 1 843 253 150 39 chr17 11410615 11411002 -78093551 - MLT1C LTR MaLR -2 465 36 303 300 152 17 chr17 11411031 11411203 -78093350 + L2 LINE L2 2445 2659 -655 1226 184 108 54 chr17 11411203 11411572 -78092981 + MLT1B LTR MaLR 1 389 -1 303 300 152 17 chr17 11411572 11411636 -78092917 + L2 LINE L2 2659 2713 -601 853 93 0 31 chr17 11411654 11411815 -78092738 + (TCCC)n Simple_repeat Simple_repeat 4 159 0 746 137 4 40 chr17 11412065 11412350 -78092203 + (TCCC)n Simple_repeat Simple_repeat 1 274 0 335 198 12 93 chr17 11412373 11412459 -78092094 - L2 LINE L2 -44 3269 3191 225 0 0 0 chr17 11412599 11412624 -78091929 + (CA)n Simple_repeat Simple_repeat 1 25 0 218 326 62 51 chr17 11412806 11412984 -78091569 + L2 LINE L2 3118 3297 -16 451 260 28 61 chr17 11413014 11413195 -78091358 - MIR SINE MIR -71 191 17 22 35 0 0 chr17 11413285 11413314 -78091239 + AT_rich Low_complexity Low_complexity 1 29 0 1499 233 30 15 chr17 11413317 11413712 -78090841 + L1ME2 LINE L1 5751 6151 -13 1572 110 0 25 chr17 11413991 11414227 -78090326 + AluSg/x SINE Alu 74 303 -7 473 268 14 21 chr17 11414666 11414820 -78089733 + MIR SINE MIR 36 189 -62 1245 289 217 28 chr17 11414829 11415802 -78088751 + L2 LINE L2 1885 3037 -276 472 104 0 0 chr17 11415806 11415873 -78088680 + THE1C LTR MaLR 309 375 0 561 320 60 35 chr17 11416337 11416621 -78087932 + L2 LINE L2 3023 3313 0 231 36 0 0 chr17 11416966 11416994 -78087559 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 1041 82 24 12 chr17 11416994 11417164 -78087389 + (TTTC)n Simple_repeat Simple_repeat 3 174 0 1075 179 0 0 chr17 11417171 11417350 -78087203 - AluJo SINE Alu -36 276 98 250 140 60 0 chr17 11417426 11417476 -78087077 + Alu SINE Alu 250 302 0 294 29 0 0 chr17 11417883 11417918 -78086635 + (CA)n Simple_repeat Simple_repeat 2 36 0 334 184 0 41 chr17 11417933 11418031 -78086522 + GA-rich Low_complexity Low_complexity 1 94 0 1036 61 0 0 chr17 11418856 11418987 -78085566 + AluSg1 SINE Alu 1 131 -178 1788 142 3 27 chr17 11418991 11419286 -78085267 + AluSx SINE Alu 1 288 -24 201 74 0 0 chr17 11419286 11419313 -78085240 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 396 103 0 0 chr17 11419313 11419371 -78085182 + (GAAA)n Simple_repeat Simple_repeat 1 58 0 440 259 253 17 chr17 11419704 11419878 -78084675 + MIR SINE MIR 8 222 -40 232 389 101 0 chr17 11420347 11420496 -78084057 + L2 LINE L2 3106 3269 -3 386 249 107 53 chr17 11421003 11421172 -78083381 + MLT1K LTR MaLR 404 581 -7 219 376 107 7 chr17 11421176 11421325 -78083228 - L2 LINE L2 -3 3269 3106 188 344 0 0 chr17 11422161 11422222 -78082331 - L2 LINE L2 -7 3265 3205 219 347 11 21 chr17 11422360 11422455 -78082098 - L2 LINE L2 -52 3261 3168 228 278 118 77 chr17 11422777 11422946 -78081607 + MIR3 SINE MIR 30 205 -3 1074 283 16 18 chr17 11423371 11423736 -78080817 + LTR16A LTR ERVL 25 449 -1 439 210 50 10 chr17 11423737 11423837 -78080716 + MIR SINE MIR 85 188 -74 337 200 0 106 chr17 11423916 11424001 -78080552 - MER20 DNA MER1_type -143 76 1 1651 168 0 29 chr17 11424024 11424333 -78080220 + AluJb SINE Alu 5 304 -8 216 67 0 0 chr17 11424989 11425019 -78079534 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 2105 86 4 0 chr17 11425153 11425453 -78079100 - AluSx SINE Alu 0 301 1 2325 72 3 10 chr17 11426793 11427099 -78077454 + AluY SINE Alu 1 304 -7 715 182 80 45 chr17 11427328 11427504 -78077049 + MIR SINE MIR 12 192 -67 339 341 0 0 chr17 11428185 11428273 -78076280 + MIR SINE MIR 58 145 -117 445 226 43 86 chr17 11428331 11428517 -78076036 - MER5B DNA MER1_type 0 178 1 613 233 6 6 chr17 11428646 11428826 -78075727 + CT-rich Low_complexity Low_complexity 1 180 0 271 288 0 0 chr17 11428830 11428889 -78075664 + polypyrimidine Low_complexity Low_complexity 2 60 0 663 200 12 6 chr17 11428891 11429061 -78075492 + CT-rich Low_complexity Low_complexity 1 171 0 802 200 51 11 chr17 11429365 11429540 -78075013 - MER5A DNA MER1_type 0 189 8 1197 166 14 9 chr17 11429540 11429757 -78074796 - MER20 DNA MER1_type -1 218 1 1087 216 5 9 chr17 11429820 11430033 -78074520 + MER58A DNA MER1_type 12 223 -1 349 314 142 26 chr17 11430445 11430671 -78073882 - L2 LINE L2 -1 3271 3020 195 69 0 0 chr17 11431412 11431441 -78073112 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 332 230 123 60 chr17 11431511 11431626 -78072927 + MER112 DNA MER1_type 10 116 -144 1868 147 17 0 chr17 11431626 11431925 -78072628 + AluJb SINE Alu 1 304 -8 332 230 123 60 chr17 11431925 11432044 -78072509 + MER112 DNA MER1_type 116 259 -1 325 364 0 0 chr17 11432093 11432269 -78072284 + C-rich Low_complexity Low_complexity 4 179 0 389 347 0 0 chr17 11432291 11432467 -78072086 + C-rich Low_complexity Low_complexity 4 179 0 375 352 0 0 chr17 11432489 11432665 -78071888 + C-rich Low_complexity Low_complexity 4 179 0 2099 108 0 0 chr17 11433048 11433336 -78071217 - AluSg SINE Alu -12 298 11 22 70 0 0 chr17 11433502 11433545 -78071008 + AT_rich Low_complexity Low_complexity 1 43 0 2140 107 7 0 chr17 11433548 11433846 -78070707 - AluSx SINE Alu -12 300 1 952 160 0 0 chr17 11433854 11434004 -78070549 - FRAM SINE Alu -21 155 6 492 314 128 28 chr17 11434040 11434476 -78070077 + LTR67 LTR ERVL 78 557 0 1551 273 66 20 chr17 11435139 11435626 -78068927 - LTR33 LTR ERVL -7 514 6 716 209 142 28 chr17 11435640 11435851 -78068702 - MIR SINE MIR -20 242 8 757 232 40 5 chr17 11435853 11436051 -78068502 - MER3 DNA MER1_type -4 205 1 1978 117 24 0 chr17 11436250 11436420 -78068133 - AluSx SINE Alu -8 304 123 324 0 0 0 chr17 11436420 11436456 -78068097 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 1978 117 24 0 chr17 11436456 11436576 -78067977 - AluSx SINE Alu -189 123 7 421 262 150 47 chr17 11437259 11437492 -78067061 - MIR SINE MIR -1 261 5 2438 72 3 0 chr17 11437754 11438045 -78066508 - AluSp SINE Alu -21 292 1 530 296 158 53 chr17 11438094 11438493 -78066060 - L1ME LINE L1 -412 5709 5269 23 0 0 0 chr17 11438685 11438708 -78065845 + AT_rich Low_complexity Low_complexity 1 23 0 731 161 0 8 chr17 11438740 11438858 -78065695 - FLAM_C SINE Alu -25 118 2 2380 106 0 0 chr17 11438929 11439240 -78065313 - AluSx SINE Alu -1 311 1 248 0 31 0 chr17 11439242 11439274 -78065279 + (TA)n Simple_repeat Simple_repeat 2 34 0 922 193 49 67 chr17 11439328 11439551 -78065002 + MER20 DNA MER1_type 1 219 0 361 285 112 65 chr17 11439908 11440122 -78064431 + MIR SINE MIR 20 243 -19 668 208 49 16 chr17 11440289 11440474 -78064079 - MIR SINE MIR -54 208 20 437 282 133 36 chr17 11441251 11441446 -78063107 - MIR SINE MIR -39 223 10 1879 233 122 20 chr17 11441714 11442254 -78062299 + MLT1G1 LTR MaLR 1 595 0 1762 194 0 10 chr17 11442495 11442805 -78061748 - AluJo SINE Alu -1 311 5 386 321 52 36 chr17 11442809 11443058 -78061495 - L3 LINE CR1 -193 1384 1132 935 162 181 0 chr17 11443420 11443630 -78060923 - L1MB5 LINE L1 -90 6084 5837 512 264 277 3 chr17 11443933 11444106 -78060447 + L2 LINE L2 2919 3043 -270 231 36 0 0 chr17 11444106 11444134 -78060419 + (TG)n Simple_repeat Simple_repeat 2 29 0 512 264 277 3 chr17 11444134 11444270 -78060283 + L2 LINE L2 3043 3313 0 237 207 0 0 chr17 11444886 11444968 -78059585 + (TG)n Simple_repeat Simple_repeat 1 82 0 718 265 6 6 chr17 11445138 11445304 -78059249 + MER5B DNA MER1_type 1 166 -12 275 312 10 67 chr17 11445357 11445524 -78059029 + MIR3 SINE MIR 44 196 -51 667 204 74 19 chr17 11445832 11445994 -78058559 + FRAM SINE Alu 1 168 -8 1165 157 25 20 chr17 11447400 11447417 -78057136 - AluJo SINE Alu 0 312 297 2202 115 0 37 chr17 11447417 11447738 -78056815 - AluSc SINE Alu 0 309 1 1165 157 25 20 chr17 11447738 11447917 -78056636 - AluJo SINE Alu -15 297 115 2253 93 0 17 chr17 11448091 11448391 -78056162 + AluSq SINE Alu 1 295 -18 258 324 75 30 chr17 11448422 11448589 -78055964 + L2 LINE L2 2865 3036 -236 466 309 146 20 chr17 11448811 11449112 -78055441 + MLT1H LTR MaLR 210 548 -1 433 245 29 7 chr17 11449140 11449279 -78055274 - LTR37B LTR ERV1 -111 357 216 573 144 0 0 chr17 11449685 11449775 -78054778 + AluS SINE Alu 222 311 -1 2306 95 0 0 chr17 11449983 11450292 -78054261 + AluSq SINE Alu 3 311 0 351 276 40 84 chr17 11450356 11450581 -78053972 + L2 LINE L2 3025 3239 -33 731 217 38 38 chr17 11450704 11450861 -78053692 - MER63A DNA MER1_type -1478 210 51 2204 113 3 7 chr17 11450861 11451154 -78053399 - AluSg SINE Alu -18 292 1 731 217 38 38 chr17 11451154 11451180 -78053373 - MER63A DNA MER1_type -1636 52 27 283 174 0 87 chr17 11451266 11451358 -78053195 + MER58 DNA MER1_type 45 128 -87 248 228 18 0 chr17 11451361 11451418 -78053135 + GA-rich Low_complexity Low_complexity 3 60 0 394 227 0 3 chr17 11451424 11451511 -78053042 + MER58 DNA MER1_type 257 2420 0 2319 86 7 0 chr17 11451561 11451852 -78052701 - AluSx SINE Alu -19 293 1 23 0 0 0 chr17 11452382 11452405 -78052148 + AT_rich Low_complexity Low_complexity 1 23 0 2503 247 76 21 chr17 11452405 11453219 -78051334 - L1ME1 LINE L1 -18 6217 5359 2255 123 7 3 chr17 11453245 11453555 -78050998 - AluSq SINE Alu -2 311 1 380 294 27 41 chr17 11453560 11453781 -78050772 - L1ME1 LINE L1 -2629 3586 3369 1375 185 0 16 chr17 11453782 11454025 -78050528 - AluJb SINE Alu -4 308 70 1849 231 122 15 chr17 11454025 11454661 -78049892 - L1M4 LINE L1 -953 5193 4480 297 75 0 0 chr17 11454661 11454701 -78049852 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1849 231 122 15 chr17 11454701 11454736 -78049817 - L1M4 LINE L1 -1666 4480 4450 252 260 13 0 chr17 11454738 11454815 -78049738 - L1M4 LINE L1 -2625 3521 3444 1246 224 42 70 chr17 11454882 11455506 -78049047 - L1M4 LINE L1 -2693 3453 2848 * 1314 272 48 45 chr17 11455481 11456058 -78048495 - L1ME1 LINE L1 -4346 1914 1388 2336 270 44 30 chr17 11456061 11456776 -78047777 - L1ME1 LINE L1 -5517 879 150 2415 88 3 0 chr17 11456776 11457073 -78047480 - AluSp SINE Alu -15 298 1 2336 270 44 30 chr17 11457073 11457182 -78047371 - L1ME1 LINE L1 -6246 150 44 180 286 71 14 chr17 11457208 11457278 -78047275 + MER5B DNA MER1_type 1 74 -104 * 211 272 163 11 chr17 11457228 11457320 -78047233 - MER5A DNA MER1_type -22 167 62 263 128 0 0 chr17 11457569 11457608 -78046945 + MIR SINE MIR 224 262 0 424 244 94 47 chr17 11457640 11457767 -78046786 - MIR3 SINE MIR -63 145 13 342 0 0 0 chr17 11457821 11457859 -78046694 + (TG)n Simple_repeat Simple_repeat 2 39 0 2464 84 10 0 chr17 11458786 11459096 -78045457 - AluSp SINE Alu 0 313 1 253 263 149 97 chr17 11459658 11459772 -78044781 + MIR SINE MIR 17 136 -72 2268 109 0 0 chr17 11459796 11460125 -78044428 + AluSx SINE Alu 1 329 0 785 144 36 93 chr17 11461709 11461754 -78042799 - MER5A DNA MER1_type 0 189 143 2384 90 0 3 chr17 11461754 11462054 -78042499 - AluSc SINE Alu -10 299 1 785 144 36 93 chr17 11462054 11462202 -78042351 - MER5A DNA MER1_type -46 143 7 448 190 40 30 chr17 11462711 11462811 -78041742 - MER5A DNA MER1_type -5 184 84 537 230 9 18 chr17 11462816 11462929 -78041624 + MER81 DNA DNA 1 112 -2 484 141 0 0 chr17 11462946 11463017 -78041536 - MER5A DNA MER1_type -118 71 1 2073 104 47 0 chr17 11464738 11465017 -78039536 - AluSp SINE Alu -9 304 13 181 260 60 0 chr17 11465129 11465179 -78039374 - MIR SINE MIR -110 98 46 456 291 30 0 chr17 11465617 11465751 -78038802 + MIR3 SINE MIR 15 152 -56 627 195 122 24 chr17 11465765 11465873 -78038680 + MER5A DNA MER1_type 7 138 -51 1838 172 3 3 chr17 11465873 11466164 -78038389 - AluJb SINE Alu -10 302 12 627 195 122 24 chr17 11466164 11466219 -78038334 + MER5A DNA MER1_type 138 186 -3 2101 112 0 0 chr17 11466239 11466516 -78038037 + AluSg SINE Alu 24 300 -10 2359 98 0 0 chr17 11467582 11467877 -78036676 - AluSc SINE Alu -10 299 5 431 303 114 37 chr17 11468286 11468557 -78035996 + L3 LINE CR1 780 1071 -506 377 315 82 35 chr17 11469152 11469384 -78035169 + MIR SINE MIR 14 256 -6 1185 225 9 0 chr17 11470001 11470223 -78034330 - MER58A DNA MER1_type 0 224 1 499 286 0 92 chr17 11470233 11470429 -78034124 + MIR SINE MIR 20 197 -65 453 189 0 0 chr17 11470472 11470567 -78033986 + CT-rich Low_complexity Low_complexity 3 97 0 275 196 26 0 chr17 11471722 11471875 -78032678 + (TG)n Simple_repeat Simple_repeat 1 157 0 220 157 39 0 chr17 11471901 11471952 -78032601 + (TG)n Simple_repeat Simple_repeat 2 54 0 2126 141 0 0 chr17 11472328 11472633 -78031920 - AluSx SINE Alu -7 305 1 2612 40 0 3 chr17 11473070 11473367 -78031186 - AluY SINE Alu -15 296 1 669 266 29 34 chr17 11473757 11473964 -78030589 - MIR SINE MIR -51 211 6 491 255 79 123 chr17 11474095 11474180 -78030373 + L2 LINE L2 2677 2764 -508 2424 58 41 0 chr17 11474180 11474473 -78030080 - AluYa5 SINE Alu -6 305 1 491 255 79 123 chr17 11474473 11474919 -78029634 + L2 LINE L2 2764 3185 -87 2044 144 3 3 chr17 11474919 11475218 -78029335 - AluSx SINE Alu -13 299 1 491 255 79 123 chr17 11475218 11475267 -78029286 + L2 LINE L2 3185 3235 -37 370 285 78 6 chr17 11475465 11475620 -78028933 - MIR SINE MIR -55 207 44 185 287 198 0 chr17 11476475 11476576 -78027977 - MIR3 SINE MIR 0 208 88 226 318 47 0 chr17 11478134 11478219 -78026334 + MIR SINE MIR 65 153 -109 2125 120 7 13 chr17 11478273 11478573 -78025980 - AluSq SINE Alu -15 298 1 261 303 0 0 chr17 11479051 11479117 -78025436 - MER81 DNA DNA -43 71 6 2311 141 59 26 chr17 11479636 11480085 -78024468 - MLT1C LTR MaLR -8 459 1 206 128 51 0 chr17 11480454 11480493 -78024060 - L2 LINE L2 -8 3305 3265 533 187 285 0 chr17 11481172 11481295 -78023258 + MIR SINE MIR 60 217 -45 1530 58 0 21 chr17 11481806 11481994 -78022559 + AluY SINE Alu 110 293 -18 243 247 79 11 chr17 11482019 11482108 -78022445 + MER113 DNA MER1_type? 149 243 -278 909 174 5 85 chr17 11482113 11482221 -78022332 - MER58A DNA MER1_type -2196 224 109 2173 107 54 48 chr17 11482221 11482594 -78021959 + THE1C LTR MaLR 1 375 0 909 174 5 85 chr17 11482594 11482657 -78021896 - MER58A DNA MER1_type -2311 109 43 1919 120 8 0 chr17 11482657 11482915 -78021638 + AluSx SINE Alu 23 282 -30 231 61 0 0 chr17 11482916 11482949 -78021604 + (CAAAC)n Simple_repeat Simple_repeat 3 35 0 909 174 5 85 chr17 11482949 11482986 -78021567 - MER58A DNA MER1_type -2376 44 30 362 281 100 19 chr17 11482996 11483156 -78021397 + MER113 DNA MER1_type? 247 419 -102 246 254 14 28 chr17 11483740 11483811 -78020742 - MIR SINE MIR -94 114 45 2157 121 3 17 chr17 11483938 11484235 -78020318 - AluSx SINE Alu -19 293 1 21 36 0 0 chr17 11484235 11484263 -78020290 + AT_rich Low_complexity Low_complexity 1 28 0 3668 165 12 49 chr17 11484263 11484850 -78019703 - L1MB3 LINE L1 0 6183 5629 2233 108 0 0 chr17 11484850 11485145 -78019408 - AluSx SINE Alu -17 295 1 3668 165 12 49 chr17 11485145 11485309 -78019244 - L1MB3 LINE L1 -554 5629 5460 2166 69 0 4 chr17 11486218 11486479 -78018074 + AluY SINE Alu 37 296 -15 228 329 38 13 chr17 11486627 11486785 -78017768 - L2 LINE L2 -225 3047 2886 45 0 0 0 chr17 11486871 11486916 -78017637 + AT_rich Low_complexity Low_complexity 1 45 0 2301 97 0 0 chr17 11486916 11487205 -78017348 + AluSg SINE Alu 1 289 -21 251 41 0 61 chr17 11487205 11487254 -78017299 - L1PA8 LINE L1 -1 6171 6126 * 1007 46 0 0 chr17 11487240 11487370 -78017183 + L1P3 LINE L1 5615 5744 -428 414 189 179 0 chr17 11487665 11487771 -78016782 - L1MB1 LINE L1 -38 6151 6027 678 280 75 51 chr17 11488045 11488417 -78016136 + L2 LINE L2 2933 3313 0 629 218 6 32 chr17 11489209 11489365 -78015188 - MLT1A1 LTR MaLR 0 365 214 198 288 41 0 chr17 11489367 11489440 -78015113 - MIR SINE MIR -158 104 29 2366 96 0 0 chr17 11489445 11489738 -78014815 - AluSg SINE Alu -17 293 1 595 264 86 84 chr17 11490274 11490762 -78013791 - MLT1J LTR MaLR -20 491 3 1863 171 37 100 chr17 11490922 11491031 -78013522 + MLT1D LTR MaLR 1 115 -390 2268 171 8 0 chr17 11491031 11491416 -78013137 + MLT1B LTR MaLR 1 388 -2 1863 171 37 100 chr17 11491416 11491844 -78012709 + MLT1D LTR MaLR 115 504 -1 209 351 34 34 chr17 11491864 11492012 -78012541 - L2 LINE L2 -1067 2247 2100 2143 126 0 0 chr17 11493450 11493751 -78010802 - AluSx SINE Alu -10 302 2 308 314 100 18 chr17 11494043 11494263 -78010290 + MIR SINE MIR 19 256 -6 550 285 168 14 chr17 11494460 11494674 -78009879 + MIR SINE MIR 16 262 0 2260 112 0 3 chr17 11499087 11499399 -78005154 - AluSx SINE Alu -1 311 1 670 297 38 0 chr17 11499428 11499613 -78004940 + MIR SINE MIR 59 250 -12 524 287 66 6 chr17 11499670 11499862 -78004691 - MIR SINE MIR -32 230 26 2298 112 3 0 chr17 11499951 11500247 -78004306 - AluSp SINE Alu -16 297 1 2511 96 0 0 chr17 11500597 11500910 -78003643 - AluSq SINE Alu 0 313 1 187 333 51 34 chr17 11502327 11502444 -78002109 + L3 LINE CR1 1222 1340 -237 195 297 47 0 chr17 11502612 11502676 -78001877 - MIR3 SINE MIR -50 158 92 450 29 44 0 chr17 11503093 11503161 -78001392 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 567 278 78 22 chr17 11503496 11503726 -78000827 + MIR SINE MIR 20 262 0 213 245 57 0 chr17 11503726 11503779 -78000774 + MIR SINE MIR 96 151 -57 748 207 5 92 chr17 11503926 11504143 -78000410 - MER20 DNA MER1_type 0 219 22 199 356 87 9 chr17 11504169 11504284 -78000269 + L2 LINE L2 3132 3255 -17 1427 209 95 50 chr17 11504421 11504862 -77999691 + MLT1C LTR MaLR 7 467 0 672 223 102 51 chr17 11505172 11505331 -77999222 + L1ME3A LINE L1 5881 6061 -109 2405 81 3 3 chr17 11505331 11505628 -77998925 - AluSp SINE Alu -16 297 1 672 223 102 51 chr17 11505628 11505742 -77998811 + L1ME3A LINE L1 6061 6168 -2 308 256 66 33 chr17 11505743 11505864 -77998689 + L1MC5 LINE L1 7508 7632 -329 2078 241 98 39 chr17 11506211 11506602 -77997951 + L1ME2 LINE L1 4846 5213 -951 2048 130 3 20 chr17 11506602 11506901 -77997652 + AluSx SINE Alu 1 294 -18 2078 241 98 39 chr17 11506901 11507722 -77996831 + L1ME2 LINE L1 5213 6127 -37 2394 93 3 0 chr17 11507722 11508024 -77996529 - AluY SINE Alu -7 304 2 787 260 12 53 chr17 11508391 11508660 -77995893 - MIR SINE MIR 0 262 7 261 267 93 0 chr17 11508943 11509018 -77995535 - MIR SINE MIR -70 192 111 2343 100 3 0 chr17 11509039 11509338 -77995215 - AluSq SINE Alu -13 300 1 772 214 21 11 chr17 11509524 11509711 -77994842 + MER53 DNA DNA 1 189 0 349 253 11 21 chr17 11512715 11512810 -77991743 - MIR SINE MIR -10 252 159 387 238 69 75 chr17 11512824 11512984 -77991569 + MIR SINE MIR 74 232 -30 590 239 9 0 chr17 11513353 11513466 -77991087 + MER81 DNA DNA 1 114 0 1926 131 7 30 chr17 11513580 11513878 -77990675 - AluJb SINE Alu -21 291 1 22 0 0 0 chr17 11514014 11514036 -77990517 + AT_rich Low_complexity Low_complexity 1 22 0 251 129 129 59 chr17 11514042 11514127 -77990426 - L1MC5 LINE L1 -44 7917 7827 1021 129 19 57 chr17 11514157 11514217 -77990336 + Tigger2 DNA MER2_type 1 62 -2656 1774 174 7 3 chr17 11514217 11514510 -77990043 - AluJo SINE Alu -18 294 1 1021 129 19 57 chr17 11514510 11514658 -77989895 + Tigger2 DNA MER2_type 62 201 -2517 1926 99 64 32 chr17 11514658 11514940 -77989613 + AluY SINE Alu 1 291 -20 694 229 14 0 chr17 11514972 11515116 -77989437 + Tigger2 DNA MER2_type 2564 2709 -9 2013 150 7 3 chr17 11515333 11515640 -77988913 - AluJo SINE Alu -4 308 1 321 327 34 14 chr17 11515652 11515860 -77988693 - L1MC5 LINE L1 -371 7590 7379 218 300 50 12 chr17 11515874 11515954 -77988599 + L2 LINE L2 3172 3254 -18 2375 87 7 3 chr17 11516145 11516485 -77988068 - AluY SINE Alu 0 341 1 2653 147 10 77 chr17 11516485 11517071 -77987482 + LTR36 LTR ERV1 9 555 -56 225 0 0 0 chr17 11517644 11517669 -77986884 + (T)n Simple_repeat Simple_repeat 1 25 0 979 193 0 0 chr17 11518953 11519124 -77985429 + AluJb SINE Alu 130 300 -12 1929 142 0 10 chr17 11519177 11519466 -77985087 + AluSq SINE Alu 26 311 -2 216 233 0 0 chr17 11519542 11519615 -77984938 + (TGG)n Simple_repeat Simple_repeat 3 75 0 747 209 0 0 chr17 11519627 11520153 -77984400 + (TGG)n Simple_repeat Simple_repeat 1 526 0 338 346 0 0 chr17 11520194 11520330 -77984223 + (TGG)n Simple_repeat Simple_repeat 3 138 0 250 202 11 11 chr17 11520348 11520437 -77984116 + (TGG)n Simple_repeat Simple_repeat 1 89 0 300 142 15 5 chr17 11520952 11521016 -77983537 - Alu SINE Alu -253 46 3 1931 144 26 15 chr17 11521017 11521541 -77983012 - L1P4 LINE L1 -700 5466 4938 958 101 20 0 chr17 11521708 11521856 -77982697 - L1PB2 LINE L1 -2 6149 5999 688 109 0 0 chr17 11521858 11521959 -77982594 - L1PB2 LINE L1 -410 5741 5641 1720 227 99 15 chr17 11522059 11522629 -77981924 - MLT2F LTR ERVL -41 611 1 2446 23 0 0 chr17 11522854 11523154 -77981399 + L1P2 LINE L1 5275 5574 -580 326 242 10 61 chr17 11524290 11524389 -77980164 + HAL1b LINE L1 814 907 -441 1599 173 94 15 chr17 11524585 11524926 -77979627 + MLT1B LTR MaLR 23 390 0 231 326 76 101 chr17 11526259 11526535 -77978018 - L2 LINE L2 -4 3268 3000 1831 101 0 0 chr17 11527349 11527586 -77976967 + AluSg/x SINE Alu 74 310 0 1201 261 36 29 chr17 11527589 11528003 -77976550 - MLT1J2 LTR MaLR -33 417 1 2442 217 55 15 chr17 11528038 11528582 -77975971 - MLT1F1 LTR MaLR 0 567 2 349 258 18 96 chr17 11528810 11528977 -77975576 + MLT1J LTR MaLR 339 492 -19 233 136 45 23 chr17 11529009 11529053 -77975500 - L2 LINE L2 -23 3249 3205 2396 77 6 13 chr17 11529081 11529394 -77975159 + AluY SINE Alu 1 311 0 741 259 6 0 chr17 11530781 11530943 -77973610 - MER5A DNA MER1_type -14 175 13 1011 169 28 5 chr17 11530968 11530981 -77973572 - MER5A DNA MER1_type -2 181 170 2494 155 57 0 chr17 11530981 11531387 -77973166 - MSTB1 LTR MaLR 0 432 4 1011 169 28 5 chr17 11531387 11531560 -77972993 - MER5A DNA MER1_type -13 170 9 392 242 71 9 chr17 11531630 11531844 -77972709 + MER115 DNA AcHobo 136 435 -258 569 348 25 16 chr17 11531920 11532164 -77972389 + MIR SINE MIR 8 253 -9 806 250 9 24 chr17 11532759 11532971 -77971582 + MER3 DNA MER1_type 1 209 0 599 331 106 35 chr17 11533220 11533731 -77970822 + L1ME4a LINE L1 4348 4894 -1252 315 284 71 98 chr17 11533744 11533927 -77970626 + L1ME4a LINE L1 5702 5879 -242 883 135 0 8 chr17 11533960 11534093 -77970460 + AluSq/x SINE Alu 1 132 -180 2132 138 44 0 chr17 11534397 11534694 -77969859 - AluSx SINE Alu -2 310 1 670 297 38 0 chr17 11534723 11534908 -77969645 + MIR SINE MIR 59 250 -12 524 287 66 6 chr17 11534965 11535157 -77969396 - MIR SINE MIR -32 230 26 2138 108 4 4 chr17 11535246 11535525 -77969028 - AluSp SINE Alu -16 297 19 2455 56 0 20 chr17 11535725 11536028 -77968525 - AluY SINE Alu -14 297 1 665 160 9 0 chr17 11536073 11536179 -77968374 - U6 snRNA snRNA 0 107 1 2281 114 0 3 chr17 11536681 11536979 -77967574 - AluSq SINE Alu -16 297 1 241 248 33 111 chr17 11537878 11537995 -77966558 + MIR3 SINE MIR 7 108 -127 4536 44 0 4 chr17 11537995 11538537 -77966016 - L1PA5 LINE L1 0 6154 5615 241 248 33 111 chr17 11538537 11538582 -77965971 + MIR3 SINE MIR 108 155 -80 196 247 161 0 chr17 11539453 11539534 -77965019 + L2 LINE L2 2067 2160 -1154 297 244 0 24 chr17 11540487 11540569 -77963984 - L2 LINE L2 -1 3312 3233 870 331 106 20 chr17 11540650 11540798 -77963755 + L2 LINE L2 1925 2059 -1255 2115 132 30 48 chr17 11540798 11541169 -77963384 - THE1B LTR MaLR 0 364 1 870 331 106 20 chr17 11541169 11541756 -77962797 + L2 LINE L2 2059 2723 -591 228 266 0 31 chr17 11541856 11541920 -77962633 + MLT1K LTR MaLR 181 242 -346 266 150 25 38 chr17 11542000 11542080 -77962473 + CT-rich Low_complexity Low_complexity 2 80 0 2403 150 36 20 chr17 11542084 11542523 -77962030 - L1MA9 LINE L1 -4 6308 5863 2738 96 0 3 chr17 11542523 11542879 -77961674 + THE1A LTR MaLR 1 355 0 249 228 38 13 chr17 11543121 11543200 -77961353 + MLT1L LTR MaLR 535 615 0 204 339 9 9 chr17 11543576 11543685 -77960868 + L2 LINE L2 3201 3309 -4 218 324 0 29 chr17 11543691 11543796 -77960757 - L2 LINE L2 -177 3095 2994 263 181 11 64 chr17 11544773 11544867 -77959686 + GA-rich Low_complexity Low_complexity 2 90 0 1582 236 64 18 chr17 11545187 11545523 -77959030 - MLT1D LTR MaLR -45 460 98 2008 132 76 20 chr17 11545523 11545865 -77958688 + THE1B LTR MaLR 4 364 0 1582 236 64 18 chr17 11545865 11545964 -77958589 - MLT1D LTR MaLR -407 98 5 291 238 140 20 chr17 11546108 11546216 -77958337 + MIR SINE MIR 46 162 -46 186 224 0 0 chr17 11546272 11546321 -77958232 + T-rich Low_complexity Low_complexity 3 51 0 3629 61 2 7 chr17 11546753 11547215 -77957338 - L1PA8 LINE L1 -1 6171 5712 316 297 142 7 chr17 11547633 11547781 -77956772 + MIR SINE MIR 23 190 -72 435 297 97 7 chr17 11548852 11549007 -77955546 + MIR SINE MIR 20 188 -74 1265 218 65 58 chr17 11550471 11550884 -77953669 + L1ME2 LINE L1 5740 6155 -9 2636 80 3 6 chr17 11550944 11551294 -77953259 - L1PA8A LINE L1 0 6131 5783 217 336 87 0 chr17 11552108 11552212 -77952341 - L2 LINE L2 -13 3259 3147 2397 95 20 0 chr17 11552316 11552620 -77951933 + AluSg SINE Alu 1 310 0 1600 149 45 31 chr17 11553104 11553392 -77951161 + AluJb SINE Alu 1 292 -20 543 235 31 43 chr17 11553401 11553563 -77950990 - MIR SINE MIR -26 236 77 353 274 39 92 chr17 11553864 11554017 -77950536 + L2 LINE L2 3123 3267 -5 192 379 19 10 chr17 11555020 11555123 -77949430 + L2 LINE L2 2932 3035 -237 435 314 65 53 chr17 11555454 11555792 -77948761 - MLT1H LTR MaLR -205 344 3 314 278 41 21 chr17 11555916 11556013 -77948540 + L2 LINE L2 3174 3272 0 222 292 45 45 chr17 11556008 11556097 -77948456 - L2 LINE L2 -25 3288 3200 * 305 255 101 43 chr17 11557034 11557222 -77947331 + MIR SINE MIR 64 262 0 404 299 37 49 chr17 11557297 11557461 -77947092 + MIR3 SINE MIR 10 171 -37 285 221 8 102 chr17 11558198 11558325 -77946228 + MIR3 SINE MIR 43 157 -51 * 351 161 12 12 chr17 11558310 11558391 -77946162 - L2 LINE L2 -2506 808 728 2008 157 0 0 chr17 11559229 11559528 -77945025 - AluSx SINE Alu -13 299 1 204 319 0 0 chr17 11559591 11559638 -77944915 + L2 LINE L2 3134 3180 -92 740 288 134 11 chr17 11559733 11560062 -77944491 - L2 LINE L2 -220 3093 2725 354 61 0 0 chr17 11560064 11560113 -77944440 + (GA)n Simple_repeat Simple_repeat 2 50 0 3776 279 85 30 chr17 11560145 11562056 -77942497 - L2 LINE L2 -950 2364 349 407 293 62 47 chr17 11562166 11562422 -77942131 + MIR SINE MIR 1 260 -2 406 278 88 16 chr17 11562467 11562661 -77941892 - L2 LINE L2 -2955 359 152 225 0 0 0 chr17 11563466 11563491 -77941062 + (T)n Simple_repeat Simple_repeat 1 25 0 269 284 30 0 chr17 11563534 11563601 -77940952 + Charlie8 DNA MER1_type 175 243 -2174 2383 92 16 3 chr17 11563645 11563951 -77940602 - AluSq SINE Alu -3 310 1 2888 136 45 0 chr17 11564025 11564488 -77940065 - L1PA16 LINE L1 -3 6163 5680 647 99 0 0 chr17 11564489 11564570 -77939983 - 5S rRNA rRNA -34 87 7 5680 158 6 62 chr17 11564571 11566265 -77938288 - L1PA16 LINE L1 -481 5685 4098 234 0 0 0 chr17 11566712 11566738 -77937815 + (TG)n Simple_repeat Simple_repeat 2 27 0 341 257 44 9 chr17 11566862 11566975 -77937578 + MIR SINE MIR 73 189 -73 317 280 58 111 chr17 11567462 11567705 -77936848 - L2 LINE L2 -12 3260 3031 318 160 0 0 chr17 11567705 11567755 -77936798 + MLT1A1 LTR MaLR 1 50 -315 4079 83 0 0 chr17 11567768 11568300 -77936253 - L1PA13 LINE L1 -2 6161 5630 1718 208 24 15 chr17 11568307 11568639 -77935914 + MLT1A1 LTR MaLR 31 365 0 257 327 26 9 chr17 11568639 11568752 -77935801 - L2 LINE L2 -237 3035 2921 2152 131 0 22 chr17 11569717 11570029 -77934524 + AluSx SINE Alu 3 307 -5 308 103 0 0 chr17 11570840 11570879 -77933674 + MER77 LTR ERV1 105 143 -462 * 2046 165 12 20 chr17 11570877 11571223 -77933330 + MER77 LTR ERV1 263 605 0 210 259 0 0 chr17 11571687 11571741 -77932812 + MIR SINE MIR 179 232 -30 1361 196 310 11 chr17 11571780 11572157 -77932396 + MLT2B1 LTR ERVL 1 490 -64 321 113 25 62 chr17 11572244 11572324 -77932229 + MLT2B1 LTR ERVL 442 518 -2 565 206 0 128 chr17 11573069 11573148 -77931405 + MER5B DNA MER1_type 1 88 -90 2043 92 43 7 chr17 11573148 11573430 -77931123 + AluSx SINE Alu 12 303 -9 565 206 0 128 chr17 11573430 11573554 -77930999 + MER5B DNA MER1_type 88 178 0 1239 147 13 9 chr17 11574104 11574329 -77930224 + L1MB4 LINE L1 5955 6180 0 308 240 21 21 chr17 11574357 11574453 -77930100 - L2 LINE L2 -274 2998 2903 6503 150 15 33 chr17 11574804 11574954 -77929599 - Ricksha_b DNA DNA -1600 1254 1103 2256 104 3 0 chr17 11574954 11575252 -77929301 + AluSg SINE Alu 1 299 -11 6503 150 15 33 chr17 11575252 11576232 -77928321 - Ricksha_b DNA DNA -1751 1103 143 2061 141 29 35 chr17 11576232 11576609 -77927944 - THE1C LTR MaLR 0 375 1 6503 150 15 33 chr17 11576609 11576621 -77927932 - Ricksha_b DNA DNA -2711 143 132 326 346 0 0 chr17 11576629 11576730 -77927823 + MIR3 SINE MIR 54 154 -54 2444 75 0 0 chr17 11576916 11577208 -77927345 + AluY SINE Alu 1 292 -19 320 227 0 0 chr17 11577633 11577699 -77926854 - MER117 DNA MER1_type -47 150 85 277 250 0 0 chr17 11578746 11578810 -77925743 + L1P4 LINE L1 5533 5596 -569 1731 147 10 51 chr17 11580320 11580633 -77923920 + AluJo SINE Alu 1 300 -12 240 293 0 0 chr17 11580693 11580751 -77923802 + L2 LINE L2 2236 2293 -1021 1182 262 86 33 chr17 11581053 11581622 -77922931 - HAL1 LINE L1 -818 1689 1091 7759 31 6 0 chr17 11581654 11582715 -77921838 - L1PA3 LINE L1 -3 6152 5090 7027 26 39 0 chr17 11582715 11583552 -77921001 + L1PA3 LINE L1 4223 5092 -1054 3013 168 11 2 chr17 11583820 11584349 -77920204 - L1MB3 LINE L1 0 6183 5650 953 194 12 0 chr17 11584355 11584520 -77920033 - FAM SINE Alu -8 167 1 2317 103 3 0 chr17 11585280 11585580 -77918973 + AluSx SINE Alu 1 301 -11 2167 108 4 0 chr17 11586203 11586482 -77918071 + AluSp SINE Alu 1 280 -33 193 29 59 0 chr17 11586484 11586518 -77918035 + (CAA)n Simple_repeat Simple_repeat 1 36 0 559 204 72 28 chr17 11586768 11586949 -77917604 - L1ME2 LINE L1 -19 6145 5957 939 246 36 71 chr17 11586977 11587473 -77917080 - PABL_B LTR ERV1 -42 625 3 2478 81 0 3 chr17 11587578 11587887 -77916666 - AluY SINE Alu -1 310 3 910 219 108 14 chr17 11587898 11588177 -77916376 - L1ME2 LINE L1 -260 5904 5600 313 279 87 33 chr17 11588181 11588364 -77916189 - L1ME2 LINE L1 -1712 4434 4242 2083 78 4 0 chr17 11588609 11588864 -77915689 - AluY SINE Alu -55 256 1 440 265 42 58 chr17 11588905 11589094 -77915459 - L2 LINE L2 -15 3298 3113 2192 108 47 0 chr17 11589121 11589417 -77915136 + AluSx SINE Alu 1 310 -2 2507 147 65 161 chr17 11589951 11590756 -77913797 - LTR8A LTR ERV1 0 727 1 232 271 0 153 chr17 11591395 11591442 -77913111 + L2 LINE L2 3192 3212 -101 825 228 68 55 chr17 11591442 11591661 -77912892 + MER58A DNA MER1_type 3 224 0 232 271 0 153 chr17 11591661 11591731 -77912822 + L2 LINE L2 3212 3291 -22 330 331 70 7 chr17 11591963 11592105 -77912448 + L2 LINE L2 3121 3271 -1 24 0 0 0 chr17 11592420 11592444 -77912109 + AT_rich Low_complexity Low_complexity 1 24 0 2317 86 10 22 chr17 11592444 11592757 -77911796 + AluSq SINE Alu 1 309 -4 180 0 0 0 chr17 11592757 11592777 -77911776 + (TA)n Simple_repeat Simple_repeat 2 21 0 1039 137 122 20 chr17 11592782 11592979 -77911574 - L1PB3 LINE L1 -7 6147 5931 547 235 61 0 chr17 11593271 11593403 -77911150 + L1M4 LINE L1 5597 5736 -438 7533 168 60 28 chr17 11593403 11594927 -77909626 + MER4B-int LTR ERV1 3090 4662 -2096 2219 163 62 71 chr17 11594944 11595448 -77909105 + MER4B-int LTR ERV1 5264 5814 -944 5534 78 24 25 chr17 11595448 11595574 -77908979 + MER4E LTR ERV1 1 126 -640 2250 119 6 0 chr17 11595574 11595885 -77908668 - AluSq SINE Alu 0 313 1 5534 78 24 25 chr17 11595885 11596525 -77908028 + MER4E LTR ERV1 126 766 0 2219 163 62 71 chr17 11596525 11596774 -77907779 + MER4B-int LTR ERV1 5814 6064 -694 2458 162 92 0 chr17 11596784 11597198 -77907355 + LTR47A LTR ERVL 1 452 0 2201 123 0 0 chr17 11597320 11597620 -77906933 - AluSx SINE Alu -12 300 1 3861 288 110 14 chr17 11599617 11601221 -77903332 + L2 LINE L2 10 1766 -1548 323 223 143 54 chr17 11601219 11601307 -77903246 - L2 LINE L2 -1390 1924 1823 * 2029 111 4 0 chr17 11601307 11601577 -77902976 + AluSg SINE Alu 39 309 -1 323 223 143 54 chr17 11601577 11601600 -77902953 - L2 LINE L2 -1491 1823 1803 677 256 135 19 chr17 11602498 11602764 -77901789 - MER102b DNA MER1_type -25 316 20 812 205 6 0 chr17 11603148 11603505 -77901048 + (CTCA)n Simple_repeat Simple_repeat 1 358 0 1045 268 89 33 chr17 11603512 11604221 -77900332 - L2 LINE L2 -3 3310 2642 519 60 0 0 chr17 11604221 11604288 -77900265 + (TA)n Simple_repeat Simple_repeat 2 68 0 2207 84 11 0 chr17 11604290 11604576 -77899977 - AluSc SINE Alu -20 289 1 1045 268 89 33 chr17 11604576 11604619 -77899934 - L2 LINE L2 -671 2642 2504 2526 66 0 28 chr17 11605447 11605767 -77898786 - AluY SINE Alu 0 311 1 180 259 86 0 chr17 11605905 11605963 -77898590 + MIR SINE MIR 124 186 -76 267 246 0 14 chr17 11606243 11606312 -77898241 + GA-rich Low_complexity Low_complexity 4 71 0 205 345 0 0 chr17 11607618 11607673 -77896880 - L2 LINE L2 -97 3175 3121 1148 312 101 26 chr17 11607750 11607992 -77896561 - L2 LINE L2 -428 2886 2663 2280 85 0 19 chr17 11607992 11608308 -77896245 - AluY SINE Alu -1 310 1 1148 312 101 26 chr17 11608308 11608859 -77895694 - L2 LINE L2 -651 2663 2034 540 313 0 12 chr17 11609316 11609476 -77895077 + MER5B DNA MER1_type 21 178 0 441 316 59 0 chr17 11610971 11611123 -77893430 - MIR SINE MIR -14 248 88 386 125 0 0 chr17 11611123 11611179 -77893374 - MER20 DNA MER1_type -163 56 1 2279 129 92 32 chr17 11611353 11611757 -77892796 - MSTA LTR MaLR 0 428 1 2065 267 25 15 chr17 11611759 11612279 -77892274 - MER69 DNA AcHobo -698 528 4 1814 113 3 93 chr17 11613043 11613397 -77891156 - AluSx SINE Alu 0 326 1 252 0 0 0 chr17 11613528 11613556 -77890997 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 287 287 78 0 chr17 11614891 11615006 -77889547 + MIR SINE MIR 13 137 -71 270 235 0 44 chr17 11615010 11615078 -77889475 - L2 LINE L2 -1 3271 3207 405 0 0 0 chr17 11615688 11615733 -77888820 + (TG)n Simple_repeat Simple_repeat 2 46 0 2152 111 7 0 chr17 11615733 11616021 -77888532 - AluSg1 SINE Alu -19 290 1 23 54 0 0 chr17 11616025 11616062 -77888491 + AT_rich Low_complexity Low_complexity 1 37 0 382 263 45 39 chr17 11616249 11616428 -77888125 - L1MC/D LINE L1 -1988 5820 5641 585 216 9 26 chr17 11616796 11616912 -77887641 + MER81 DNA DNA 1 114 0 2207 95 0 3 chr17 11618786 11619091 -77885462 + AluSc SINE Alu 1 304 0 183 405 13 0 chr17 11619560 11619639 -77884914 + L3 LINE CR1 1497 1576 -1 1834 174 9 22 chr17 11621516 11621832 -77882721 + AluJb SINE Alu 1 312 0 2398 104 4 21 chr17 11621843 11622557 -77881996 + AluY SINE Alu 1 310 -1 270 343 57 0 chr17 11623543 11623648 -77880905 - L2 LINE L2 -4 3268 3158 967 224 91 118 chr17 11623775 11624239 -77880314 + MLT1K LTR MaLR 133 583 -5 192 344 53 46 chr17 11624335 11624466 -77880087 - L2 LINE L2 -193 3079 2948 1966 127 30 23 chr17 11624487 11624787 -77879766 - AluSx SINE Alu -10 302 1 290 281 226 20 chr17 11625049 11625195 -77879358 + MER5B DNA MER1_type 3 178 0 508 314 71 51 chr17 11625349 11625699 -77878854 - L2 LINE L2 -7 3306 2950 * 1622 263 112 16 chr17 11625693 11626272 -77878281 - L2 LINE L2 -810 2504 1870 6880 234 36 46 chr17 11626471 11627631 -77876922 - L1MCa LINE L1 -1530 4896 3726 2031 122 4 0 chr17 11627631 11627946 -77876607 - AluSg1 SINE Alu 0 316 1 6880 234 36 46 chr17 11627946 11629380 -77875173 - L1MCa LINE L1 -2700 3726 2393 772 196 80 18 chr17 11629378 11629823 -77874730 - L1MCa LINE L1 -4236 2190 1289 * 1898 116 55 10 chr17 11629825 11630117 -77874436 - AluSx SINE Alu -7 305 1 213 276 17 0 chr17 11630301 11630359 -77874194 + GA-rich Low_complexity Low_complexity 2 60 0 486 246 84 18 chr17 11630510 11630740 -77873813 + MIR SINE MIR 11 262 0 2133 132 3 0 chr17 11630915 11631225 -77873328 - AluSq SINE Alu -2 311 1 1727 192 17 59 chr17 11631280 11631687 -77872866 - MLT1B LTR MaLR 0 390 1 263 185 0 37 chr17 11632253 11632307 -77872246 - L2 LINE L2 0 3313 3262 316 291 76 32 chr17 11632908 11633066 -77871487 + L2 LINE L2 3118 3282 -31 375 269 50 62 chr17 11633464 11633624 -77870929 + MER117 DNA MER1_type 11 168 -29 1307 236 20 16 chr17 11633743 11634092 -77870461 - L1ME1 LINE L1 0 6166 5820 536 0 16 0 chr17 11634257 11634321 -77870232 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 494 294 59 11 chr17 11635642 11635829 -77868724 - MIR SINE MIR -38 224 29 1635 184 7 3 chr17 11636172 11636476 -77868077 - AluJo SINE Alu 0 305 1 455 286 78 10 chr17 11636484 11636676 -77867877 - L1ME3A LINE L1 -312 5858 5654 1200 279 74 24 chr17 11636685 11636711 -77867842 + MER20B DNA MER1_type 36 59 -724 2244 123 0 0 chr17 11636711 11637011 -77867542 - AluSx SINE Alu -12 300 1 1200 279 74 24 chr17 11637011 11637446 -77867107 + MER20B DNA MER1_type 59 520 -263 1756 150 18 47 chr17 11637478 11637893 -77866660 + L1MB3 LINE L1 5207 5609 -571 723 209 10 46 chr17 11637905 11638101 -77866452 + L1PBa LINE L1 6 194 -6669 9474 201 97 20 chr17 11638101 11641452 -77863101 + L1PBa LINE L1 906 4525 -2337 2027 141 3 72 chr17 11641455 11641790 -77862763 + L1MB3 LINE L1 5818 6124 -59 2510 66 0 3 chr17 11641790 11642093 -77862460 + AluY SINE Alu 1 302 -9 2027 141 3 72 chr17 11642093 11642146 -77862407 + L1MB3 LINE L1 6124 6179 -4 28 29 0 0 chr17 11642150 11642185 -77862368 + AT_rich Low_complexity Low_complexity 1 35 0 572 226 7 7 chr17 11642431 11642568 -77861985 + MER20B DNA MER1_type 647 783 0 433 267 19 61 chr17 11642568 11642787 -77861766 - L1ME3A LINE L1 -506 5656 5430 1948 166 82 20 chr17 11642787 11643190 -77861363 + MSTA LTR MaLR 1 428 0 433 267 19 61 chr17 11643190 11643260 -77861293 - L1ME3A LINE L1 -732 5430 4891 1519 121 60 4 chr17 11643354 11643603 -77860950 - L1MA5A LINE L1 0 6297 6035 247 147 0 73 chr17 11643606 11643674 -77860879 - L1ME3A LINE L1 -1310 4836 4774 26 30 0 0 chr17 11643891 11643924 -77860629 + AT_rich Low_complexity Low_complexity 1 33 0 1941 191 14 19 chr17 11645204 11645571 -77858982 + MLT1A1 LTR MaLR 1 365 0 1080 256 78 80 chr17 11646226 11646750 -77857803 + L1MCa LINE L1 385 907 -5515 5906 160 49 14 chr17 11646783 11648714 -77855839 + L1PA16 LINE L1 1344 6961 0 2040 222 167 45 chr17 11648706 11649558 -77854995 + L1MCa LINE L1 2003 2958 -3983 * 557 141 0 0 chr17 11649550 11649635 -77854918 + L1PA11 LINE L1 6069 6153 -21 * 1068 299 53 14 chr17 11649677 11650165 -77854388 + L1MCa LINE L1 2960 3466 -3475 * 1633 174 317 27 chr17 11650161 11650684 -77853869 + L1MC3 LINE L1 5270 5944 -1841 216 23 23 47 chr17 11650708 11650751 -77853802 + (TA)n Simple_repeat Simple_repeat 1 42 0 199 0 0 61 chr17 11650821 11650854 -77853699 + (TA)n Simple_repeat Simple_repeat 2 32 0 23 0 0 0 chr17 11651403 11651426 -77853127 + AT_rich Low_complexity Low_complexity 1 23 0 2410 81 3 0 chr17 11651472 11651768 -77852785 - AluSp SINE Alu -16 297 1 235 333 39 0 chr17 11651805 11651883 -77852670 + HAL1 LINE L1 4 84 -2423 705 262 99 0 chr17 11651997 11652230 -77852323 + MLT1H1 LTR MaLR 293 548 -7 228 273 36 18 chr17 11652258 11652368 -77852185 + HAL1 LINE L1 2009 2120 -387 270 81 0 0 chr17 11652410 11652447 -77852106 + (TG)n Simple_repeat Simple_repeat 2 38 0 1309 229 114 35 chr17 11652502 11652974 -77851579 + MER39 LTR ERV1 21 707 0 2349 110 3 0 chr17 11653058 11653368 -77851185 - AluSx SINE Alu -1 311 1 347 349 8 0 chr17 11653632 11653761 -77850792 + MIR3 SINE MIR 48 177 -31 390 209 117 37 chr17 11653780 11653943 -77850610 + L1ME4a LINE L1 5718 5893 -228 191 268 18 0 chr17 11654123 11654179 -77850374 + L2 LINE L2 3035 3091 -181 1039 220 96 0 chr17 11655144 11655362 -77849191 + MER8 DNA MER2_type 1 239 0 2354 67 7 7 chr17 11655650 11655949 -77848604 - AluY SINE Alu -12 299 1 383 329 83 62 chr17 11656176 11656598 -77847955 + L2 LINE L2 2834 3264 -8 220 244 0 0 chr17 11656774 11656815 -77847738 - L2 LINE L2 -95 3177 3137 225 224 20 0 chr17 11657538 11657587 -77846966 + L2 LINE L2 3262 3311 -2 223 228 35 0 chr17 11658211 11658268 -77846285 + L2 LINE L2 2993 3051 -221 1124 201 14 151 chr17 11658670 11658732 -77845821 - MLT1A1 LTR MaLR 0 365 296 1959 138 3 0 chr17 11658732 11659049 -77845504 + AluSg SINE Alu 1 318 0 1124 201 14 151 chr17 11659049 11659408 -77845145 - MLT1A1 LTR MaLR -69 296 1 456 256 16 16 chr17 11660734 11660863 -77843690 + MLT1I LTR MaLR 275 403 -6 2675 165 4 29 chr17 11660918 11661397 -77843156 - MLT1C LTR MaLR 0 467 1 216 202 10 40 chr17 11661501 11661600 -77842953 + (TTATA)n Simple_repeat Simple_repeat 4 99 0 228 111 0 0 chr17 11662753 11662789 -77841764 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 245 300 14 0 chr17 11663043 11663113 -77841440 - MIR SINE MIR -113 149 79 271 279 67 10 chr17 11663158 11663262 -77841291 - L3 LINE CR1 -205 1372 1263 251 281 68 5 chr17 11663846 11663985 -77840568 - MIR3 SINE MIR -44 164 12 189 309 12 12 chr17 11664084 11664165 -77840388 + MIR SINE MIR 164 244 -18 658 327 52 22 chr17 11664362 11664769 -77839784 + L2 LINE L2 1941 2359 -955 2231 113 3 0 chr17 11664779 11665072 -77839481 + AluSq SINE Alu 1 294 -19 331 325 18 43 chr17 11665140 11665303 -77839250 - L2 LINE L2 0 3313 3155 486 266 57 13 chr17 11665316 11665474 -77839079 + L2 LINE L2 2378 2542 -772 33 0 0 0 chr17 11665976 11666009 -77838544 + AT_rich Low_complexity Low_complexity 1 33 0 332 191 16 0 chr17 11666825 11666888 -77837665 + MER69 DNA AcHobo 4 67 -2459 2320 93 0 13 chr17 11667121 11667434 -77837119 + AluSc SINE Alu 1 309 0 333 179 0 0 chr17 11668148 11668204 -77836349 - MER69 DNA AcHobo -112 65 10 291 246 212 0 chr17 11669369 11669487 -77835066 - MER5A DNA MER1_type -1 188 46 347 169 14 0 chr17 11669512 11669583 -77834970 + MER5A DNA MER1_type 4 75 -114 1503 150 3 88 chr17 11669583 11669889 -77834664 + AluJo SINE Alu 2 281 -31 2498 83 0 0 chr17 11669889 11670188 -77834365 - AluY SINE Alu -11 300 1 295 149 0 0 chr17 11670223 11670270 -77834283 + MER5A DNA MER1_type 67 113 -76 2350 81 13 7 chr17 11671897 11672195 -77832358 - AluSg1 SINE Alu -9 300 1 246 95 0 0 chr17 11673053 11673095 -77831458 + (T)n Simple_repeat Simple_repeat 1 42 0 585 259 44 60 chr17 11673568 11673819 -77830734 - LTR33A LTR ERVL -2 521 275 567 0 0 0 chr17 11673889 11673952 -77830601 + (CTG)n Simple_repeat Simple_repeat 1 63 0 221 297 16 78 chr17 11674159 11674287 -77830266 - L2 LINE L2 -3 3269 3150 387 0 0 0 chr17 11674304 11674347 -77830206 + (T)n Simple_repeat Simple_repeat 1 43 0 184 219 0 0 chr17 11674925 11674966 -77829587 + MIR SINE MIR 87 127 -81 182 264 207 11 chr17 11676052 11676108 -77828445 - MER5A DNA MER1_type -7 182 138 2234 118 0 0 chr17 11676108 11676404 -77828149 + AluSx SINE Alu 1 296 -16 182 264 207 11 chr17 11676404 11676434 -77828119 - MER5A DNA MER1_type -51 138 79 194 318 56 9 chr17 11676703 11676810 -77827743 - MIR3 SINE MIR -1 207 96 403 225 116 29 chr17 11677033 11677171 -77827382 - Charlie8 DNA MER1_type -2267 150 1 2283 110 7 0 chr17 11677314 11677613 -77826940 + AluSq SINE Alu 1 301 -12 2085 242 99 25 chr17 11677937 11678154 -77826399 - L1ME3A LINE L1 -9 6161 5961 309 26 0 0 chr17 11678154 11678192 -77826361 + (TG)n Simple_repeat Simple_repeat 1 38 0 2085 242 99 25 chr17 11678192 11678934 -77825619 - L1ME3A LINE L1 -209 5961 5030 533 263 166 0 chr17 11679039 11679256 -77825297 + MIR SINE MIR 10 262 0 208 231 0 0 chr17 11679285 11679324 -77825229 + polypurine Low_complexity Low_complexity 3 41 0 540 224 180 12 chr17 11679757 11679918 -77824635 - MER5A DNA MER1_type -1 188 1 1652 185 64 0 chr17 11679927 11680225 -77824328 + MER58B DNA MER1_type 2 318 -23 5488 143 33 11 chr17 11680495 11681398 -77823155 + MER49 LTR ERV1 1 923 0 248 170 0 0 chr17 11682147 11682194 -77822359 - MIR SINE MIR -65 143 97 783 286 122 20 chr17 11683028 11683420 -77821133 + MLT1K LTR MaLR 100 531 -57 907 133 12 75 chr17 11683512 11683685 -77820868 + FRAM SINE Alu 2 163 -13 926 279 30 70 chr17 11685174 11685600 -77818953 + MLT1I LTR MaLR 1 409 0 5585 145 7 29 chr17 11687566 11687826 -77816727 + MER49 LTR ERV1 2 266 -657 2438 53 0 0 chr17 11687826 11688150 -77816403 + AluY SINE Alu 1 324 0 5585 145 7 29 chr17 11688150 11688830 -77815723 + MER49 LTR ERV1 266 923 0 198 143 0 0 chr17 11688959 11688994 -77815559 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 1755 274 101 21 chr17 11688999 11689572 -77814981 - L2 LINE L2 -7 3306 2780 2094 104 30 0 chr17 11689572 11689841 -77814712 + AluSc SINE Alu 1 277 -32 1755 274 101 21 chr17 11689841 11690498 -77814055 - L2 LINE L2 -533 2780 1969 610 328 112 14 chr17 11691297 11691593 -77812960 + L2 LINE L2 2471 2795 -519 267 340 83 33 chr17 11691601 11691842 -77812711 + L2 LINE L2 3001 3253 -60 469 235 44 37 chr17 11692646 11692782 -77811771 - MER5B DNA MER1_type -25 153 17 185 323 46 15 chr17 11692724 11692789 -77811764 + MER5A DNA MER1_type 114 180 -9 * 253 209 0 0 chr17 11692804 11692847 -77811706 - MIR SINE MIR -56 152 110 290 243 78 19 chr17 11692874 11692977 -77811576 - HAL1b LINE L1 -614 734 626 181 224 86 35 chr17 11693088 11693146 -77811407 + MER5A DNA MER1_type 13 73 -116 * 409 226 226 41 chr17 11693099 11693245 -77811308 - MER5A DNA MER1_type -8 181 9 321 296 114 50 chr17 11693388 11693608 -77810945 + MLT1K LTR MaLR 283 516 -72 988 246 104 74 chr17 11694153 11694547 -77810006 - MLT1F LTR MaLR 0 542 137 1496 199 7 28 chr17 11694738 11695020 -77809533 - AluJb SINE Alu -36 276 1 2165 100 0 21 chr17 11696242 11696564 -77807989 + AluSg SINE Alu 1 316 0 2158 93 0 0 chr17 11696681 11696949 -77807604 - AluSq SINE Alu -45 268 1 243 0 0 0 chr17 11697765 11697792 -77806761 + (TG)n Simple_repeat Simple_repeat 1 27 0 246 356 78 47 chr17 11698065 11698385 -77806168 + L2 LINE L2 2943 3272 0 488 191 95 0 chr17 11699086 11699191 -77805362 - L1MA10 LINE L1 -16 6318 6204 2343 113 0 0 chr17 11699360 11699669 -77804884 - AluSc SINE Alu 0 309 1 3944 105 11 2 chr17 11700628 11701170 -77803383 + L1PB2 LINE L1 5601 6147 -4 2277 122 3 0 chr17 11701184 11701496 -77803057 + AluSq SINE Alu 1 313 0 1986 159 83 28 chr17 11701680 11702077 -77802476 + MSTA LTR MaLR 1 419 -9 1679 239 97 42 chr17 11702086 11702613 -77801940 - MLT1G LTR MaLR -12 578 23 940 185 0 34 chr17 11702617 11702795 -77801758 - FRAM SINE Alu -5 171 1 203 402 68 0 chr17 11703107 11703224 -77801329 + L2 LINE L2 3140 3264 -8 261 359 0 0 chr17 11703345 11703448 -77801105 + L3 LINE CR1 1231 1333 -244 834 254 11 16 chr17 11703896 11704085 -77800468 + MER5A DNA MER1_type 2 189 0 563 207 71 64 chr17 11704376 11704516 -77800037 + FLAM_A SINE Alu 1 141 -1 553 246 7 25 chr17 11704783 11704926 -77799627 - MIR SINE MIR -62 146 29 23 68 0 0 chr17 11705480 11705524 -77799029 + AT_rich Low_complexity Low_complexity 1 44 0 468 306 30 8 chr17 11705537 11705671 -77798882 + MIR SINE MIR 9 145 -117 1834 243 94 11 chr17 11705674 11706248 -77798305 - MLT2F LTR ERVL -3 660 2 21 71 0 0 chr17 11706543 11706585 -77797968 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr17 11707350 11707372 -77797181 + AT_rich Low_complexity Low_complexity 1 22 0 883 282 24 12 chr17 11707623 11707878 -77796675 + MIR SINE MIR 2 259 -3 2890 7 0 0 chr17 11708879 11709188 -77795365 - AluYa5 SINE Alu -2 309 1 517 281 43 6 chr17 11709768 11709932 -77794621 + MIR SINE MIR 36 205 -57 321 305 26 26 chr17 11710836 11710990 -77793563 - MLT1I LTR MaLR -255 154 1 3540 157 21 116 chr17 11711119 11711337 -77793216 + L1MA10 LINE L1 5508 5745 -589 245 100 20 0 chr17 11711337 11711387 -77793166 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 3540 157 21 116 chr17 11711387 11712079 -77792474 + L1MA10 LINE L1 5745 6331 -3 2097 128 7 0 chr17 11712088 11712385 -77792168 + AluSq SINE Alu 1 299 -14 2139 120 3 0 chr17 11712386 11712678 -77791875 + AluSg SINE Alu 1 293 -17 5996 15 8 0 chr17 11712729 11713377 -77791176 + L1PA4 LINE L1 5503 6155 0 256 185 0 0 chr17 11713398 11713443 -77791110 + MIR SINE MIR 106 150 -58 570 312 94 40 chr17 11713668 11714330 -77790223 + L2 LINE L2 2608 3313 0 1830 152 14 7 chr17 11715028 11715325 -77789228 + AluJb SINE Alu 1 299 -13 2653 154 16 5 chr17 11715758 11716181 -77788372 - MSTA LTR MaLR 0 428 1 369 62 0 0 chr17 11716410 11716458 -77788095 + (TG)n Simple_repeat Simple_repeat 1 48 0 399 279 39 102 chr17 11716517 11716771 -77787782 - MLT1K LTR MaLR -3 585 348 3553 127 27 35 chr17 11717379 11717970 -77786583 - LTR60 LTR ERV1 0 586 1 4065 207 41 32 chr17 11718276 11719130 -77785423 - MER21B LTR ERV1 -1 862 1 3119 143 109 107 chr17 11719513 11720236 -77784317 + LTR8A LTR ERV1 1 725 -2 260 332 54 38 chr17 11720588 11720901 -77783652 - L1M4 LINE L1 -1315 4831 4514 426 307 91 24 chr17 11720976 11721263 -77783290 - L1M4 LINE L1 -1637 4509 4204 292 193 108 24 chr17 11721377 11721460 -77783093 - HAL1b LINE L1 -923 425 336 225 345 212 0 chr17 11721688 11721801 -77782752 + MIR SINE MIR 4 140 -122 1954 252 59 66 chr17 11721801 11722311 -77782242 + L1MB5 LINE L1 3813 4325 -1821 5287 47 0 0 chr17 11722311 11722902 -77781651 + LTR10C LTR ERV1 1 591 0 1954 252 59 66 chr17 11722902 11723188 -77781365 + L1MB5 LINE L1 4325 4612 -1534 2275 99 0 0 chr17 11723188 11723482 -77781071 + AluY SINE Alu 1 294 -17 1954 252 59 66 chr17 11723482 11724028 -77780525 + L1MB5 LINE L1 4612 5072 -1074 2254 206 57 66 chr17 11724028 11724587 -77779966 - MLT2B3 LTR ERVL 0 554 1 1954 252 59 66 chr17 11724587 11724780 -77779773 + L1MB5 LINE L1 5072 5265 -881 1059 146 34 96 chr17 11724781 11725020 -77779533 + L1MB5 LINE L1 5943 6166 -8 * 4683 154 52 19 chr17 11725018 11725894 -77778659 + L1MB5 LINE L1 5270 6174 0 361 224 52 17 chr17 11725896 11726012 -77778541 + MIR SINE MIR 143 262 0 842 263 157 23 chr17 11726435 11726948 -77777605 - MLT2E LTR ERVL 0 628 1 2120 126 3 0 chr17 11727057 11727350 -77777203 + AluSg SINE Alu 1 294 -16 1601 209 81 88 chr17 11727609 11728176 -77776377 - MLT1F1 LTR MaLR 0 567 1 2348 91 3 0 chr17 11728700 11728997 -77775556 - AluSc SINE Alu -11 298 1 1308 237 28 31 chr17 11729557 11729911 -77774642 - MLT1A1 LTR MaLR 0 365 13 256 269 147 58 chr17 11730100 11730256 -77774297 - HAL1b LINE L1 -463 885 716 2147 124 79 22 chr17 11730364 11730719 -77773834 - THE1C LTR MaLR 0 375 1 2311 101 0 21 chr17 11730766 11731003 -77773550 + MER47A DNA MER2_type 37 266 -2057 2426 171 18 37 chr17 11731003 11731437 -77773116 - MSTB LTR MaLR 0 426 1 2311 101 0 21 chr17 11731437 11731536 -77773017 + MER47A DNA MER2_type 266 366 0 382 209 9 48 chr17 11731591 11731696 -77772857 - HAL1b LINE L1 -867 481 381 1668 276 37 54 chr17 11731721 11731940 -77772613 + MLT1E LTR MaLR 7 228 -365 1180 103 43 16 chr17 11731940 11732124 -77772429 + MER53 DNA DNA 1 189 0 1668 276 37 54 chr17 11732124 11732501 -77772052 + MLT1E LTR MaLR 228 593 0 2060 107 3 55 chr17 11732700 11733010 -77771543 - AluSq SINE Alu -19 294 1 1988 140 0 7 chr17 11733822 11734115 -77770438 + AluSx SINE Alu 1 291 -21 303 28 0 0 chr17 11734122 11734158 -77770395 + (TAAAA)n Simple_repeat Simple_repeat 5 40 0 2380 61 7 0 chr17 11734616 11734735 -77769818 + AluY SINE Alu 1 118 -193 549 0 0 0 chr17 11734735 11734796 -77769757 + (CA)n Simple_repeat Simple_repeat 2 62 0 2380 61 7 0 chr17 11734796 11734972 -77769581 + AluY SINE Alu 118 298 -13 728 367 38 10 chr17 11734981 11735373 -77769180 + MERVL LTR ERVL 728 1130 -3866 336 266 64 104 chr17 11735362 11735475 -77769078 + MERVL LTR ERVL 1246 1362 -4402 * 2610 149 26 33 chr17 11735475 11735676 -77768877 + MSTB LTR MaLR 1 202 -224 2080 94 42 3 chr17 11735676 11735963 -77768590 + AluSg SINE Alu 1 298 -12 2610 149 26 33 chr17 11735963 11736190 -77768363 + MSTB LTR MaLR 202 426 0 336 266 64 104 chr17 11736190 11736422 -77768131 + MERVL LTR ERVL 1362 1577 -4187 1319 335 36 42 chr17 11736476 11737329 -77767224 + MERVL LTR ERVL 1570 2417 -2579 1872 175 66 95 chr17 11737330 11737771 -77766782 - MSTC LTR MaLR 0 428 1 4093 250 97 48 chr17 11737777 11739358 -77765195 - MSTC-int LTR MaLR -5 1730 2 2271 194 21 39 chr17 11739362 11739796 -77764757 - MSTC LTR MaLR -2 426 1 755 329 62 23 chr17 11739816 11740248 -77764305 + MERVL LTR ERVL 2471 2919 -2845 570 289 14 0 chr17 11740279 11740421 -77764132 + MER5A DNA MER1_type 36 179 -10 898 313 81 47 chr17 11740422 11740790 -77763763 + MERVL LTR ERVL 3097 3451 -1954 1868 210 20 83 chr17 11740790 11740895 -77763658 - MLT1D LTR MaLR 0 505 395 2021 60 24 0 chr17 11740895 11741145 -77763408 + AluY SINE Alu 39 294 -17 1868 210 20 83 chr17 11741145 11741578 -77762975 - MLT1D LTR MaLR -110 395 1 898 313 81 47 chr17 11741578 11741708 -77762845 + MERVL LTR ERVL 3451 3575 -1830 2261 171 0 11 chr17 11741708 11742077 -77762476 - MLT1A1 LTR MaLR 0 365 1 898 313 81 47 chr17 11742077 11742991 -77761562 + MERVL LTR ERVL 3575 4527 -878 773 301 69 45 chr17 11743126 11743574 -77760979 + MERVL LTR ERVL 4779 5237 -527 1063 277 41 0 chr17 11743935 11744227 -77760326 + LTR16C LTR ERVL 186 489 -2 246 32 0 0 chr17 11744895 11744926 -77759627 + (TG)n Simple_repeat Simple_repeat 2 32 0 294 315 55 20 chr17 11745100 11745246 -77759307 - HERV16 LTR ERVL -4483 513 363 4555 25 4 2 chr17 11745347 11745873 -77758680 - L1PA4 LINE L1 -3 6152 5626 7421 26 9 0 chr17 11745874 11746975 -77757578 + L1PA4 LINE L1 4521 5628 -527 341 261 125 88 chr17 11747344 11747489 -77757064 - L1ME LINE L1 -326 5795 5657 2115 156 55 8 chr17 11747489 11747631 -77756922 - L1MA10 LINE L1 -18 6316 6182 345 47 0 0 chr17 11747631 11747674 -77756879 + (TG)n Simple_repeat Simple_repeat 2 44 0 2115 156 55 8 chr17 11747674 11747916 -77756637 - L1MA10 LINE L1 -152 6182 5914 341 261 125 88 chr17 11747916 11748065 -77756488 - L1ME LINE L1 -464 5657 5490 609 294 124 40 chr17 11748083 11748633 -77755920 - L2 LINE L2 -1014 2300 1705 1901 156 71 3 chr17 11748816 11749155 -77755398 - MLT1A1 LTR MaLR 0 365 4 221 186 0 0 chr17 11749456 11749499 -77755054 - L2 LINE L2 0 3313 3271 3332 173 29 3 chr17 11749574 11750164 -77754389 + MER6A DNA MER2_type 1 605 0 1879 89 3 3 chr17 11750327 11750617 -77753936 - THE1B LTR MaLR 0 364 1 241 245 0 88 chr17 11751068 11751170 -77753383 + C-rich Low_complexity Low_complexity 2 94 0 212 287 163 16 chr17 11753281 11753410 -77751143 - MIR3 SINE MIR -14 194 47 1119 166 106 119 chr17 11753988 11754160 -77750393 - MLT1A2 LTR MaLR 0 374 201 2102 96 51 17 chr17 11754160 11754453 -77750100 - AluSc SINE Alu -6 303 1 1119 166 106 119 chr17 11754453 11754659 -77749894 - MLT1A2 LTR MaLR -173 201 1 564 114 0 0 chr17 11754866 11754945 -77749608 - MER72 LTR ERV1 0 722 644 1312 120 0 6 chr17 11754945 11755120 -77749433 + AluSx SINE Alu 1 174 -138 1249 103 0 6 chr17 11755120 11755295 -77749258 + AluSg/x SINE Alu 122 295 -17 235 275 84 15 chr17 11755303 11755434 -77749119 + L1M4 LINE L1 3662 3801 -2345 1985 179 53 16 chr17 11755574 11755948 -77748605 + MLT1C LTR MaLR 80 467 0 582 284 77 72 chr17 11756693 11757511 -77747042 + HAL1 LINE L1 881 1705 -802 1661 207 24 0 chr17 11757511 11757845 -77746708 + MER2 DNA MER2_type 2 343 -1 582 284 77 72 chr17 11757845 11757883 -77746670 + HAL1 LINE L1 1705 1741 -766 960 214 0 5 chr17 11757884 11758071 -77746482 - MLT2C1 LTR ERVL -211 186 1 490 239 83 22 chr17 11758328 11758508 -77746045 + L1MC4 LINE L1 5722 5912 -1896 260 222 89 22 chr17 11758536 11758626 -77745927 + L1MC4 LINE L1 6608 6703 -1339 227 119 0 0 chr17 11758630 11758672 -77745881 - LTR66 LTR ERVL -171 439 398 2608 42 0 0 chr17 11759175 11759483 -77745070 - L1PA4 LINE L1 -3 6152 5845 1230 45 7 0 chr17 11759483 11759637 -77744916 + L1P LINE L1 4942 5096 -1050 180 278 165 0 chr17 11759704 11759819 -77744734 + MIR SINE MIR 111 244 -18 230 270 11 34 chr17 11759916 11760005 -77744548 - MIR SINE MIR -90 118 32 932 213 0 0 chr17 11760492 11760656 -77743897 - FRAM SINE Alu -17 159 1 335 263 13 77 chr17 11761576 11761732 -77742821 - MIR SINE MIR 0 262 117 2130 261 7 22 chr17 11761764 11762307 -77742246 - MLT1F LTR MaLR 0 542 8 190 229 0 21 chr17 11762452 11762500 -77742053 - MIR SINE MIR -6 256 210 388 311 84 59 chr17 11763304 11763402 -77741151 - LTR16C LTR ERVL -105 386 292 1752 141 198 41 chr17 11763402 11763771 -77740782 + MSTA LTR MaLR 2 428 0 388 311 84 59 chr17 11763771 11763958 -77740595 - LTR16C LTR ERVL -199 292 94 296 249 11 133 chr17 11764135 11764316 -77740237 - MLT1J LTR MaLR -347 164 6 2488 154 51 10 chr17 11765946 11766356 -77738197 - MSTA LTR MaLR 0 428 2 1094 157 65 55 chr17 11766419 11766636 -77737917 + MER20 DNA MER1_type 1 219 0 213 311 113 9 chr17 11767273 11767379 -77737174 - MIR SINE MIR -74 188 72 2343 66 0 7 chr17 11767413 11767701 -77736852 + AluY SINE Alu 3 288 -23 216 0 0 0 chr17 11767704 11767728 -77736825 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1647 219 64 26 chr17 11767767 11768219 -77736334 + LTR55 LTR ERV 80 548 0 2484 53 0 0 chr17 11768465 11768774 -77735779 - AluY SINE Alu 0 309 1 22 0 0 0 chr17 11768782 11768804 -77735749 + AT_rich Low_complexity Low_complexity 1 22 0 541 244 83 65 chr17 11769900 11770117 -77734436 - MIR SINE MIR -22 240 20 597 212 8 0 chr17 11770350 11770468 -77734085 - FLAM_A SINE Alu -13 120 2 1064 62 0 0 chr17 11770527 11770655 -77733898 - AluSg/x SINE Alu -7 303 176 212 275 28 92 chr17 11770824 11770882 -77733671 + MER5A DNA MER1_type 20 70 -119 2080 119 0 3 chr17 11770882 11771187 -77733366 + AluY SINE Alu 1 304 0 212 275 28 92 chr17 11771187 11771236 -77733317 + MER5A DNA MER1_type 70 121 -68 2335 91 3 3 chr17 11771600 11771898 -77732655 + AluSq SINE Alu 1 298 -15 395 141 0 0 chr17 11773222 11773286 -77731267 + LTR33A LTR ERVL 414 477 -46 2271 97 0 3 chr17 11773350 11773639 -77730914 + AluSx SINE Alu 1 288 -24 525 228 170 6 chr17 11773674 11773845 -77730708 - MIR SINE MIR -50 212 14 577 251 56 17 chr17 11773935 11774114 -77730439 + MER5A DNA MER1_type 4 189 0 1723 212 88 51 chr17 11774308 11774381 -77730172 + MLT1D LTR MaLR 1 70 -435 2093 107 3 13 chr17 11774381 11774680 -77729873 - AluSg SINE Alu -14 296 1 1723 212 88 51 chr17 11774680 11775092 -77729461 + MLT1D LTR MaLR 70 504 -1 647 349 121 32 chr17 11775244 11776340 -77728213 + L2 LINE L2 252 1478 -1836 2589 68 0 0 chr17 11776340 11776647 -77727906 - AluY SINE Alu -4 307 1 647 349 121 32 chr17 11776647 11776825 -77727728 + L2 LINE L2 1478 1639 -1675 1090 275 104 21 chr17 11776828 11777396 -77727157 + L1M4 LINE L1 2997 3611 -2535 858 228 147 45 chr17 11777381 11777693 -77726860 + L1ME2 LINE L1 5806 6149 -15 * 319 196 54 62 chr17 11777697 11777809 -77726744 + L1MC5 LINE L1 7773 7883 -78 231 278 62 0 chr17 11777998 11778095 -77726458 - L1ME LINE L1 -210 5911 5809 1805 77 20 156 chr17 11778531 11778883 -77725670 - AluYb8 SINE Alu -10 308 5 326 303 27 24 chr17 11778976 11779133 -77725420 + MIR SINE MIR 33 185 -58 636 276 168 14 chr17 11779143 11779354 -77725199 - L2 LINE L2 -2 3311 3134 225 94 0 0 chr17 11779354 11779386 -77725167 + (TG)n Simple_repeat Simple_repeat 2 33 0 636 276 168 14 chr17 11779386 11779782 -77724771 - L2 LINE L2 -179 3134 2616 234 247 0 104 chr17 11779772 11779849 -77724704 + MIR SINE MIR 191 259 -3 * 1321 240 96 22 chr17 11779973 11780526 -77724027 + MLT2F LTR ERVL 1 663 0 2508 69 3 3 chr17 11780572 11780876 -77723677 + AluSg SINE Alu 1 304 -6 196 283 19 0 chr17 11780947 11781000 -77723553 + L2 LINE L2 3219 3272 0 2905 140 18 8 chr17 11781019 11781526 -77723027 + L1MA7 LINE L1 5773 6284 -7 478 228 0 0 chr17 11781609 11781701 -77722852 - MLT2F LTR ERVL -555 108 17 330 303 174 0 chr17 11782451 11782583 -77721970 + MLT1L LTR MaLR 311 465 -150 1406 18 18 0 chr17 11782589 11782757 -77721796 - L1PA4 LINE L1 0 6155 5985 808 22 0 0 chr17 11782757 11782849 -77721704 + L1PA5 LINE L1 5849 5940 -214 381 266 56 14 chr17 11782849 11782992 -77721561 + MLT1L LTR MaLR 465 613 -2 21 0 0 0 chr17 11783651 11783672 -77720881 + AT_rich Low_complexity Low_complexity 1 21 0 256 217 98 22 chr17 11783683 11783775 -77720778 - L1MC4 LINE L1 -16 8026 7928 21 0 0 0 chr17 11783780 11783801 -77720752 + AT_rich Low_complexity Low_complexity 1 21 0 1448 196 50 0 chr17 11784584 11784865 -77719688 + AluJo SINE Alu 16 310 -2 450 271 8 42 chr17 11785407 11785525 -77719028 - MER81 DNA DNA 0 114 1 409 240 182 0 chr17 11787434 11787588 -77716965 + MER5A DNA MER1_type 7 188 -1 2582 49 3 3 chr17 11787708 11788016 -77716537 + AluY SINE Alu 1 308 -3 1956 88 3 100 chr17 11788193 11788538 -77716015 - AluSx SINE Alu 0 314 1 1341 205 94 7 chr17 11788668 11788966 -77715587 + MLT1A1 LTR MaLR 1 324 -41 3010 69 13 2 chr17 11788968 11789361 -77715192 + L1PA8 LINE L1 5766 6162 -10 32 33 0 33 chr17 11789364 11789399 -77715154 + AT_rich Low_complexity Low_complexity 1 35 -24 2305 127 0 0 chr17 11789399 11789707 -77714846 + AluSg SINE Alu 1 308 -2 32 33 0 33 chr17 11789707 11789732 -77714821 + AT_rich Low_complexity Low_complexity 35 59 0 348 167 0 0 chr17 11789732 11789786 -77714767 + MLT1A1 LTR MaLR 312 365 0 431 302 54 15 chr17 11789971 11790176 -77714377 - HAL1b LINE L1 -843 505 293 2387 73 0 0 chr17 11790332 11790619 -77713934 - AluY SINE Alu -24 287 1 243 0 0 0 chr17 11790879 11790906 -77713647 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1639 166 0 42 chr17 11790908 11791215 -77713338 - AluJb SINE Alu -8 304 11 253 0 0 0 chr17 11792329 11792357 -77712196 + (TTTTC)n Simple_repeat Simple_repeat 3 180 0 2418 93 0 0 chr17 11792357 11792667 -77711886 - AluSg SINE Alu 0 310 1 271 247 353 0 chr17 11792756 11792906 -77711647 + LTR50 LTR ERVL 12 214 -581 2210 47 4 25 chr17 11792907 11793183 -77711370 - AluY SINE Alu -10 301 32 896 222 129 73 chr17 11793223 11793664 -77710889 + LTR50 LTR ERVL 330 795 0 341 304 27 93 chr17 11793699 11793956 -77710597 - L2 LINE L2 -115 3157 2918 2411 68 7 0 chr17 11794143 11794436 -77710117 + AluSc SINE Alu 1 295 -14 339 313 114 0 chr17 11794459 11794590 -77709963 - L2 LINE L2 -547 2767 2622 1692 194 0 3 chr17 11794764 11795047 -77709506 - AluJo SINE Alu -30 282 1 1747 163 4 7 chr17 11795076 11795353 -77709200 + AluJo SINE Alu 5 280 -32 2173 105 10 3 chr17 11795849 11796144 -77708409 - AluSq SINE Alu -16 297 1 728 301 66 38 chr17 11796145 11796464 -77708089 + MLT1J2 LTR MaLR 120 447 -3 5040 157 8 22 chr17 11796558 11797363 -77707190 + MER54B LTR ERVL 1 793 0 2457 71 3 3 chr17 11797364 11797675 -77706878 + AluY SINE Alu 1 311 0 26 0 0 0 chr17 11797930 11797956 -77706597 + AT_rich Low_complexity Low_complexity 1 26 0 2000 119 0 41 chr17 11798130 11798266 -77706287 + AluSx SINE Alu 1 141 -182 2218 112 3 0 chr17 11798266 11798561 -77705992 + AluSx SINE Alu 1 296 -16 2000 119 0 41 chr17 11798561 11798759 -77705794 + AluSx SINE Alu 141 323 0 452 165 11 0 chr17 11798780 11798871 -77705682 + (TA)n Simple_repeat Simple_repeat 2 93 0 2727 138 10 0 chr17 11799541 11799940 -77704613 - MER57A LTR ERV1 0 403 1 795 302 106 22 chr17 11800528 11800979 -77703574 - LTR33 LTR ERVL -8 513 25 315 343 53 58 chr17 11801692 11802028 -77702525 + L2 LINE L2 2520 2855 -459 188 35 35 0 chr17 11802028 11802057 -77702496 + (CA)n Simple_repeat Simple_repeat 2 31 0 315 343 53 58 chr17 11802057 11802152 -77702401 + L2 LINE L2 2855 2949 -365 1976 140 3 0 chr17 11802706 11802992 -77701561 - AluSx SINE Alu -25 287 1 1257 306 135 34 chr17 11803045 11804014 -77700539 - L2 LINE L2 -49 3264 2169 2305 58 0 64 chr17 11804014 11804326 -77700227 + AluY SINE Alu 5 296 -15 1257 306 135 34 chr17 11804326 11804533 -77700020 - L2 LINE L2 -1144 2169 1984 1999 146 3 7 chr17 11804549 11804851 -77699702 + AluJb SINE Alu 1 301 -11 1225 73 17 0 chr17 11804877 11805054 -77699499 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 222 37 0 0 chr17 11805066 11805093 -77699460 + (GGAA)n Simple_repeat Simple_repeat 2 28 0 4178 141 14 50 chr17 11805106 11805453 -77699100 + L1MB3 LINE L1 5450 5808 -375 4350 190 38 49 chr17 11805453 11806323 -77698230 - MER21B LTR ERV1 -1 862 3 4178 141 14 50 chr17 11806323 11806496 -77698057 + L1MB3 LINE L1 5808 5986 -197 2016 170 18 42 chr17 11806496 11806896 -77697657 - MLT1B LTR MaLR 0 390 1 4178 141 14 50 chr17 11806896 11807132 -77697421 + L1MB3 LINE L1 5986 6180 -3 3671 211 54 6 chr17 11807137 11808360 -77696193 + L1MB7 LINE L1 4896 6175 -9 2205 141 144 5 chr17 11808507 11808882 -77695671 - MSTA LTR MaLR 0 428 2 5418 146 30 42 chr17 11809046 11809180 -77695373 - L1MA4 LINE L1 -3 6297 6163 569 98 0 24 chr17 11809180 11809262 -77695291 - MADE1 DNA Mariner 0 80 1 5418 146 30 42 chr17 11809262 11809615 -77694938 - L1MA4 LINE L1 -137 6163 5807 1758 90 0 9 chr17 11809615 11809848 -77694705 - AluSc SINE Alu 0 309 79 5418 146 30 42 chr17 11809848 11810415 -77694138 - L1MA4 LINE L1 -493 5807 5254 241 163 23 47 chr17 11810459 11810545 -77694008 + (TA)n Simple_repeat Simple_repeat 2 85 0 193 128 43 0 chr17 11810574 11810621 -77693932 + (TA)n Simple_repeat Simple_repeat 1 49 0 198 143 0 0 chr17 11810954 11810989 -77693564 + (T)n Simple_repeat Simple_repeat 1 35 0 2347 97 0 0 chr17 11810996 11811305 -77693248 - AluSg SINE Alu -1 309 1 2150 88 10 17 chr17 11811562 11811889 -77692664 + AluY SINE Alu 1 311 0 535 204 47 29 chr17 11813435 11813607 -77690946 - MER104 DNA MER2_type -3 177 3 568 302 21 21 chr17 11813830 11814019 -77690534 + MER5A DNA MER1_type 1 189 0 643 217 64 35 chr17 11814137 11814340 -77690213 + MLT1J2 LTR MaLR 1 209 -241 1959 190 32 0 chr17 11814512 11814860 -77689693 - MLT1A1 LTR MaLR -1 364 6 465 305 71 66 chr17 11816405 11816812 -77687741 + HAL1 LINE L1 161 569 -1938 870 248 87 63 chr17 11816878 11817371 -77687182 + HAL1 LINE L1 680 1184 -1323 328 278 98 46 chr17 11817375 11817569 -77686984 + HAL1 LINE L1 1237 1440 -1067 2347 177 135 9 chr17 11817575 11818026 -77686527 + MLT2B2 LTR ERVL 8 515 0 1180 236 108 87 chr17 11818052 11818743 -77685810 + HAL1 LINE L1 1458 2163 -344 302 317 90 18 chr17 11818933 11819016 -77685537 + MLT1J LTR MaLR 227 303 -208 315 71 0 0 chr17 11819016 11819058 -77685495 + (CA)n Simple_repeat Simple_repeat 2 43 0 302 317 90 18 chr17 11819058 11819141 -77685412 + MLT1J LTR MaLR 303 405 -106 236 302 135 32 chr17 11819201 11819453 -77685100 + HAL1 LINE L1 2147 2424 -83 1743 204 20 14 chr17 11819475 11819832 -77684721 - MLT1A2 LTR MaLR 0 374 16 2326 112 0 0 chr17 11819892 11820196 -77684357 - AluSx SINE Alu -6 306 3 217 254 0 0 chr17 11820363 11820418 -77684135 + T-rich Low_complexity Low_complexity 1 55 0 421 362 30 25 chr17 11820671 11820870 -77683683 - L2 LINE L2 -203 3069 2870 309 102 20 0 chr17 11820883 11820932 -77683621 - MADE1 DNA Mariner 0 80 31 2190 178 67 13 chr17 11821660 11822126 -77682427 - L1MCa LINE L1 -5158 1268 778 1041 193 33 20 chr17 11822127 11822371 -77682182 - L1MCa LINE L1 -6168 258 12 288 271 131 25 chr17 11822545 11822667 -77681886 - MIR3 SINE MIR -34 174 40 518 238 0 0 chr17 11823336 11823441 -77681112 - MER69A DNA AcHobo -13 164 60 851 281 34 43 chr17 11823572 11823921 -77680632 - MARNA DNA Mariner -100 486 141 792 282 61 43 chr17 11823951 11824394 -77680159 + LTR16B LTR ERVL 3 453 -11 1823 218 34 22 chr17 11824460 11824873 -77679680 + LTR52 LTR ERVL 1 418 -3 1724 160 22 116 chr17 11824915 11825328 -77679225 - MLT1A2 LTR MaLR 0 374 1 22 0 0 0 chr17 11826531 11826553 -77678000 + AT_rich Low_complexity Low_complexity 1 22 0 2310 82 3 3 chr17 11826558 11826863 -77677690 + AluSq SINE Alu 1 305 -8 201 260 0 55 chr17 11828369 11828442 -77676111 + L2 LINE L2 2997 3065 -207 1457 137 18 0 chr17 11828836 11829062 -77675491 - LTR12 LTR ERV1 0 714 485 4038 144 53 40 chr17 11829066 11829744 -77674809 - LTR12 LTR ERV1 -1 687 1 182 309 15 29 chr17 11829995 11830063 -77674490 + L2 LINE L2 3241 3307 -6 874 249 57 10 chr17 11830088 11830297 -77674256 - MER20 DNA MER1_type 0 219 1 358 264 21 42 chr17 11831688 11831832 -77672721 + LTR67 LTR ERVL 407 547 -10 201 39 0 0 chr17 11831848 11831874 -77672679 + (CA)n Simple_repeat Simple_repeat 2 27 0 196 170 38 0 chr17 11832189 11832242 -77672311 + (TA)n Simple_repeat Simple_repeat 2 56 0 2181 117 7 0 chr17 11832520 11832818 -77671735 - AluSq SINE Alu -13 300 1 325 303 53 5 chr17 11833208 11833396 -77671157 + L1ME3A LINE L1 981 1177 -5028 2045 138 0 6 chr17 11833667 11833978 -77670575 + AluSx SINE Alu 1 309 -3 2306 97 0 10 chr17 11834288 11834587 -77669966 - AluSc SINE Alu -9 300 5 329 244 30 92 chr17 11834657 11834821 -77669732 + LTR16B LTR ERVL 311 464 0 * 585 288 70 41 chr17 11834821 11835047 -77669506 - MLT1I LTR MaLR -165 244 12 337 308 81 29 chr17 11835057 11835375 -77669178 + L1M2 LINE L1 1512 1912 -4304 1585 161 0 0 chr17 11835389 11835631 -77668922 - Tigger2a DNA MER2_type 0 434 193 1543 201 81 0 chr17 11835631 11835915 -77668638 + 7SLRNA srpRNA srpRNA 1 307 -13 2457 91 0 0 chr17 11835924 11836233 -77668320 + AluY SINE Alu 1 309 -2 1268 144 0 42 chr17 11836295 11836510 -77668043 - Tigger2a DNA MER2_type -228 206 1 24 0 0 0 chr17 11836537 11836561 -77667992 + AT_rich Low_complexity Low_complexity 1 24 0 898 207 131 125 chr17 11836758 11837047 -77667506 + L1ME3A LINE L1 2149 2409 -3806 2179 157 64 43 chr17 11837047 11837227 -77667326 + MSTB1 LTR MaLR 4 179 -253 2268 117 0 0 chr17 11837227 11837535 -77667018 - AluSg SINE Alu -2 308 1 2179 157 64 43 chr17 11837535 11837774 -77666779 + MSTB1 LTR MaLR 179 432 0 898 207 131 125 chr17 11837774 11838005 -77666548 + L1ME3A LINE L1 2409 2637 -3578 1653 188 3 7 chr17 11838006 11838309 -77666244 - AluJb SINE Alu -8 304 3 180 111 0 0 chr17 11838322 11838349 -77666204 + (TC)n Simple_repeat Simple_repeat 1 27 0 864 248 37 17 chr17 11838392 11838799 -77665754 + L1ME3A LINE L1 5191 5605 -626 1458 252 26 26 chr17 11838844 11839268 -77665285 + L1ME3A LINE L1 5597 6020 -219 2302 161 51 5 chr17 11839401 11839496 -77665057 + MSTA LTR MaLR 19 108 -320 4320 109 11 88 chr17 11839496 11840193 -77664360 + LTR9B LTR ERV1 1 644 0 2302 161 51 5 chr17 11840193 11840489 -77664064 + MSTA LTR MaLR 108 428 0 826 118 15 7 chr17 11840489 11840624 -77663929 + MSTA-int LTR MaLR 1 136 -1515 369 197 162 17 chr17 11840678 11840795 -77663758 - MIR3 SINE MIR -71 137 4 3721 141 26 38 chr17 11840800 11841462 -77663091 + L1MC1 LINE L1 5678 6331 -2 616 128 0 0 chr17 11841528 11841614 -77662939 + L1PA8 LINE L1 11 96 -6365 * 10633 142 6 12 chr17 11841602 11844259 -77660294 + L1PA8 LINE L1 521 3160 -3301 12557 97 1 17 chr17 11844259 11844278 -77660275 + L1PA8 LINE L1 3992 4010 -2477 540 0 0 0 chr17 11844278 11844338 -77660215 + (TA)n Simple_repeat Simple_repeat 2 61 0 12557 97 1 17 chr17 11844338 11846819 -77657734 + L1PA8 LINE L1 4010 6485 -2 198 71 0 0 chr17 11847126 11847154 -77657399 + (A)n Simple_repeat Simple_repeat 1 28 0 625 287 45 0 chr17 11847261 11847463 -77657090 - MIR SINE MIR -6 256 46 1272 85 0 0 chr17 11847928 11848092 -77656461 - AluY SINE Alu -16 295 132 2157 229 96 10 chr17 11849434 11850027 -77654526 + LTR48B LTR ERV1 1 644 0 2531 58 0 3 chr17 11850418 11850730 -77653823 + AluY SINE Alu 1 311 0 2164 84 6 40 chr17 11850839 11851161 -77653392 + AluY SINE Alu 1 311 0 334 305 107 19 chr17 11851166 11851428 -77653125 - L1ME4a LINE L1 -71 6050 5766 236 309 15 0 chr17 11851667 11851735 -77652818 + L2 LINE L2 3187 3255 -17 277 200 12 50 chr17 11851764 11851844 -77652709 - LTR67 LTR ERVL 0 557 481 1211 224 0 73 chr17 11851845 11851909 -77652644 + L1ME2 LINE L1 5599 5666 -498 2258 101 3 0 chr17 11851909 11852205 -77652348 + AluSc SINE Alu 1 297 -12 1211 224 0 73 chr17 11852205 11852470 -77652083 + L1ME2 LINE L1 5666 5904 -260 2338 77 0 0 chr17 11853292 11853579 -77650974 + AluY SINE Alu 24 310 -1 374 344 47 27 chr17 11854172 11854428 -77650125 + MIR SINE MIR 2 262 0 4076 79 2 2 chr17 11854968 11855497 -77649056 - MER41A LTR ERV1 -25 529 1 226 343 29 29 chr17 11857279 11857416 -77647137 - MIR SINE MIR -56 152 16 317 320 20 0 chr17 11857601 11857701 -77646852 + L2 LINE L2 3198 3299 -14 209 321 112 98 chr17 11858245 11858316 -77646237 - L2 LINE L2 -2 3270 3201 2279 112 0 0 chr17 11858316 11858612 -77645941 + AluSx SINE Alu 1 296 -16 209 321 112 98 chr17 11858612 11858836 -77645717 - L2 LINE L2 -71 3201 2971 508 283 26 125 chr17 11858878 11859443 -77645110 + L2 LINE L2 2760 3274 -39 1467 176 68 102 chr17 11859443 11859492 -77645061 - MSTC LTR MaLR 0 428 379 2368 66 0 23 chr17 11859492 11859796 -77644757 - AluY SINE Alu -14 297 1 1467 176 68 102 chr17 11859796 11860189 -77644364 - MSTC LTR MaLR -49 379 1 508 283 26 125 chr17 11860189 11860226 -77644327 + L2 LINE L2 3274 3313 0 715 267 20 0 chr17 11861122 11861317 -77643236 - MIR SINE MIR 0 262 64 2290 84 0 7 chr17 11861389 11861707 -77642846 - AluY SINE Alu 0 311 3 1303 79 0 0 chr17 11861846 11862010 -77642543 - L1PA5 LINE L1 -255 5899 5736 1313 54 6 18 chr17 11862010 11862172 -77642381 + L1PA5 LINE L1 5988 6152 -2 548 176 20 0 chr17 11863684 11863786 -77640767 + AluSp/q SINE Alu 209 312 -1 579 134 10 62 chr17 11863962 11864059 -77640494 + FRAM SINE Alu 23 114 -62 392 332 131 5 chr17 11864256 11864470 -77640083 - MIR SINE MIR -3 259 19 752 285 55 40 chr17 11864607 11865010 -77639543 + MER113 DNA MER1_type? 70 478 -43 668 303 34 0 chr17 11865630 11865838 -77638715 - MIR SINE MIR -17 245 31 203 318 0 30 chr17 11866017 11866083 -77638470 + L2 LINE L2 3188 3251 -21 239 314 66 71 chr17 11866101 11866313 -77638240 + MIR SINE MIR 1 217 -45 2494 235 84 15 chr17 11866349 11866816 -77637737 + L1ME3A LINE L1 5324 5891 -271 2332 54 7 0 chr17 11866816 11867118 -77637435 + AluY SINE Alu 1 304 0 2494 235 84 15 chr17 11867118 11867409 -77637144 + L1ME3A LINE L1 5891 6160 -2 2506 52 3 7 chr17 11867645 11867952 -77636601 - AluY SINE Alu -5 306 1 2052 103 14 17 chr17 11868187 11868479 -77636074 + AluSx SINE Alu 22 312 0 347 217 88 35 chr17 11868907 11869083 -77635470 + L1MB1 LINE L1 5255 5445 -721 2720 164 17 29 chr17 11869097 11869122 -77635431 + L1MB1 LINE L1 5619 5643 -525 2026 119 3 7 chr17 11869122 11869442 -77635111 - AluSq SINE Alu 0 319 1 2720 164 17 29 chr17 11869442 11869631 -77634922 + L1MB1 LINE L1 5643 5833 -335 2394 86 0 0 chr17 11869631 11869922 -77634631 + AluSc SINE Alu 2 292 -17 2720 164 17 29 chr17 11869922 11870223 -77634330 + L1MB1 LINE L1 5833 6130 -38 1157 60 0 0 chr17 11870223 11870357 -77634196 + AluSg SINE Alu 1 134 -176 2319 55 3 45 chr17 11870357 11870666 -77633887 + AluY SINE Alu 1 296 -15 858 153 45 86 chr17 11870667 11870889 -77633664 + L1MA10 LINE L1 6120 6332 -2 2203 125 0 6 chr17 11871257 11871569 -77632984 + AluSg SINE Alu 1 310 0 305 277 107 10 chr17 11871783 11871989 -77632564 + L1ME4a LINE L1 5894 6119 -2 270 130 0 19 chr17 11872075 11872129 -77632424 + L1ME4a LINE L1 6067 6119 -2 * 312 291 73 24 chr17 11872122 11872287 -77632266 + L1ME4a LINE L1 5878 6050 -71 268 253 22 22 chr17 11873152 11873243 -77631310 + L1ME4a LINE L1 5964 6054 -67 277 294 28 0 chr17 11874282 11874391 -77630162 + MER103 DNA DNA 8 119 -47 333 287 73 22 chr17 11874921 11875057 -77629496 - MIR3 SINE MIR -17 191 49 2709 215 21 66 chr17 11875199 11875907 -77628646 + LTR8 LTR ERV1 16 691 0 336 24 0 0 chr17 11876011 11876052 -77628501 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 339 246 0 0 chr17 11876052 11876113 -77628440 - L2 LINE L2 -19 3253 3193 4619 67 0 21 chr17 11876926 11877492 -77627061 + MER41A LTR ERV1 1 554 0 184 133 0 0 chr17 11877551 11877581 -77626972 + L2 LINE L2 3266 3295 -18 388 276 119 35 chr17 11877602 11877763 -77626790 + MIR3 SINE MIR 44 206 -2 459 304 43 0 chr17 11878391 11878552 -77626001 + MIR3 SINE MIR 41 208 0 1792 119 23 8 chr17 11879291 11879551 -77625002 - AluSx SINE Alu -14 298 35 2615 55 0 0 chr17 11880044 11880351 -77624202 - AluY SINE Alu -4 307 1 224 323 101 30 chr17 11880804 11880903 -77623650 - MER5A DNA MER1_type -23 166 61 993 244 88 75 chr17 11880946 11881344 -77623209 + MLT1G LTR MaLR 7 409 -186 401 213 105 133 chr17 11881460 11881746 -77622807 - L2 LINE L2 -1 3312 3035 554 206 0 0 chr17 11881754 11881861 -77622692 - MLT1C LTR MaLR 0 467 361 720 128 0 20 chr17 11881861 11881963 -77622590 + AluSx SINE Alu 2 101 -211 1601 84 0 24 chr17 11882204 11882417 -77622136 + AluSx SINE Alu 87 294 -18 1637 187 81 9 chr17 11882417 11882764 -77621789 - MLT1C LTR MaLR -95 372 1 188 307 67 105 chr17 11882957 11883299 -77621254 + L2 LINE L2 2481 2809 -505 216 0 0 0 chr17 11883465 11883489 -77621064 + (A)n Simple_repeat Simple_repeat 1 24 0 226 316 26 13 chr17 11883638 11883714 -77620839 + L2 LINE L2 3221 3297 -16 1017 263 36 65 chr17 11883848 11884391 -77620162 - MER50 LTR ERV1 -157 577 1 243 125 0 0 chr17 11884909 11884949 -77619604 + (T)n Simple_repeat Simple_repeat 1 40 0 2408 74 0 0 chr17 11885618 11885914 -77618639 - AluY SINE Alu -15 296 1 180 0 0 0 chr17 11885993 11886013 -77618540 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2904 99 0 0 chr17 11886366 11886729 -77617824 - THE1B LTR MaLR 0 364 2 689 172 26 0 chr17 11886985 11887101 -77617452 - LTR12 LTR ERV1 -234 480 362 251 265 0 0 chr17 11887105 11887173 -77617380 - LTR30 LTR ERV1 -99 623 556 1407 102 7 136 chr17 11887173 11887523 -77617030 - LTR12 LTR ERV1 -425 289 53 271 211 0 0 chr17 11887523 11887575 -77616978 - LTR30 LTR ERV1 -670 52 1 507 109 40 10 chr17 11888824 11888925 -77615628 + CT-rich Low_complexity Low_complexity 1 104 0 963 271 69 45 chr17 11888926 11889476 -77615077 - HAL1 LINE L1 -875 1632 1070 882 265 83 66 chr17 11889996 11890385 -77614168 + MLT1G LTR MaLR 4 400 -190 202 250 0 17 chr17 11892039 11892061 -77612492 + (TTA)n Simple_repeat Simple_repeat 3 24 -37 3703 123 111 2 chr17 11892061 11892647 -77611906 + MER39B LTR ERV1 4 653 0 202 250 0 17 chr17 11892647 11892684 -77611869 + (TTA)n Simple_repeat Simple_repeat 24 61 0 195 356 144 0 chr17 11893073 11893191 -77611362 - MER5A DNA MER1_type 0 189 55 502 241 12 80 chr17 11893673 11893835 -77610718 + MER117 DNA MER1_type 15 165 -32 365 327 91 44 chr17 11894667 11895074 -77609479 + MLT1K LTR MaLR 121 546 -42 1136 131 0 0 chr17 11896930 11897098 -77607455 + Charlie3 DNA MER1_type 3 170 -2540 202 215 15 92 chr17 11897224 11897289 -77607264 - MIR SINE MIR -105 157 98 185 143 14 57 chr17 11898860 11898930 -77605623 + CT-rich Low_complexity Low_complexity 3 69 0 1631 153 60 14 chr17 11900514 11900795 -77603758 + AluJo SINE Alu 7 300 -12 2199 82 4 0 chr17 11901324 11901594 -77602959 - AluSq SINE Alu -17 296 26 25 0 0 0 chr17 11901613 11901638 -77602915 + AT_rich Low_complexity Low_complexity 1 25 0 2380 79 0 16 chr17 11902156 11902471 -77602082 + AluY SINE Alu 1 310 -1 3272 191 84 39 chr17 11903224 11903471 -77601082 + L1MC3 LINE L1 6731 6965 -820 1946 146 3 7 chr17 11903471 11903765 -77600788 - AluJo SINE Alu -13 299 7 3272 191 84 39 chr17 11903765 11904375 -77600178 + L1MC3 LINE L1 6965 7627 -158 2309 53 3 59 chr17 11904375 11904709 -77599844 + AluY SINE Alu 1 317 0 234 265 88 61 chr17 11906048 11906195 -77598358 - MIR SINE MIR 0 262 112 1763 151 70 7 chr17 11906526 11906810 -77597743 + AluJb SINE Alu 1 302 -10 22 0 0 0 chr17 11908480 11908502 -77596051 + AT_rich Low_complexity Low_complexity 1 22 0 508 273 6 51 chr17 11909154 11909330 -77595223 + MER117 DNA MER1_type 8 175 -22 1692 177 30 74 chr17 11910629 11911035 -77593518 + MLT1B LTR MaLR 3 390 0 723 225 109 101 chr17 11911170 11911636 -77592917 - MLT1H LTR MaLR 0 549 80 336 296 57 23 chr17 11912574 11912750 -77591803 - MLT1K LTR MaLR 0 588 407 201 298 298 46 chr17 11913132 11913350 -77591203 + L3 LINE CR1 712 984 -593 272 352 47 16 chr17 11913350 11913478 -77591075 + L3 LINE CR1 1377 1508 -69 201 74 0 0 chr17 11913490 11913517 -77591036 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 638 278 129 39 chr17 11913562 11913871 -77590682 - LTR16A LTR ERVL -24 426 90 756 315 118 28 chr17 11913891 11914316 -77590237 - L2 LINE L2 -44 3269 2807 210 309 41 41 chr17 11914416 11914513 -77590040 - MIR SINE MIR -63 145 49 381 317 98 6 chr17 11914528 11914706 -77589847 - MLT1L LTR MaLR 0 615 421 299 200 71 0 chr17 11914706 11914776 -77589777 - MLT1I LTR MaLR 0 409 335 193 105 0 70 chr17 11914779 11914836 -77589717 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 223 193 35 0 chr17 11914838 11914895 -77589658 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 699 305 37 55 chr17 11914897 11915222 -77589331 - MLT1I LTR MaLR -85 324 6 2235 126 0 0 chr17 11915231 11915532 -77589021 + AluSx SINE Alu 1 301 -11 1110 66 11 22 chr17 11915624 11915806 -77588747 + (GAA)n Simple_repeat Simple_repeat 1 180 0 205 345 0 0 chr17 11916240 11916298 -77588255 + L3b LINE CR1 1522 1579 -4 185 354 98 12 chr17 11916593 11916757 -77587796 + L2 LINE L2 2218 2395 -919 326 295 140 83 chr17 11916762 11917417 -77587136 + L2 LINE L2 2565 3268 -4 291 104 0 0 chr17 11918808 11918856 -77585697 + (CCG)n Simple_repeat Simple_repeat 1 48 0 22 80 0 0 chr17 11918950 11919000 -77585553 + GC_rich Low_complexity Low_complexity 1 50 0 225 0 0 0 chr17 11919236 11919261 -77585292 + (CCG)n Simple_repeat Simple_repeat 2 26 0 201 203 29 29 chr17 11919426 11919495 -77585058 + (CCG)n Simple_repeat Simple_repeat 3 71 0 29 98 0 0 chr17 11919507 11919599 -77584954 + GC_rich Low_complexity Low_complexity 1 92 0 23 68 0 0 chr17 11919724 11919768 -77584785 + GC_rich Low_complexity Low_complexity 1 44 0 23 78 0 0 chr17 11919813 11919864 -77584689 + GC_rich Low_complexity Low_complexity 1 51 0 2281 109 0 0 chr17 11924386 11924689 -77579864 + AluY SINE Alu 2 304 -7 2222 119 0 0 chr17 11925948 11926250 -77578303 - AluY SINE Alu -9 302 1 327 326 16 8 chr17 11926506 11926635 -77577918 - MIR3 SINE MIR -46 162 33 2682 40 3 0 chr17 11927034 11927336 -77577217 + AluY SINE Alu 1 303 -8 366 143 0 0 chr17 11927460 11927523 -77577030 + (TG)n Simple_repeat Simple_repeat 1 63 0 667 290 131 24 chr17 11927769 11928152 -77576401 - MARNA DNA Mariner -85 501 78 552 198 108 25 chr17 11929100 11929257 -77575296 - MIR SINE MIR -18 244 75 246 271 0 0 chr17 11932396 11932455 -77572098 + MIR SINE MIR 57 115 -147 376 330 153 40 chr17 11932673 11933052 -77571501 - L3 LINE CR1 -4 1573 1152 470 252 67 8 chr17 11933235 11933354 -77571199 + L2 LINE L2 3182 3307 -6 226 225 25 12 chr17 11933488 11933568 -77570985 + GA-rich Low_complexity Low_complexity 3 83 0 208 204 0 20 chr17 11934049 11934098 -77570455 - L2 LINE L2 0 3313 3266 * 600 268 50 88 chr17 11934065 11934326 -77570227 - MIR SINE MIR -10 252 2 2222 118 0 3 chr17 11934389 11934694 -77569859 + AluSx SINE Alu 1 304 -8 1991 173 0 0 chr17 11935555 11935867 -77568686 + AluJb SINE Alu 1 312 0 183 184 0 0 chr17 11935869 11935907 -77568646 + GA-rich Low_complexity Low_complexity 3 40 0 26 0 0 0 chr17 11936168 11936194 -77568359 + AT_rich Low_complexity Low_complexity 1 26 0 349 197 7 26 chr17 11937106 11937258 -77567295 + (TGGA)n Simple_repeat Simple_repeat 1 149 0 192 182 0 0 chr17 11937314 11937358 -77567195 + GA-rich Low_complexity Low_complexity 1 44 0 677 319 40 12 chr17 11937377 11937625 -77566928 + MIR SINE MIR 6 260 -2 264 330 0 28 chr17 11938648 11938830 -77565723 + CT-rich Low_complexity Low_complexity 4 180 0 372 296 13 13 chr17 11938905 11939064 -77565489 + CT-rich Low_complexity Low_complexity 1 159 0 2486 173 45 25 chr17 11939671 11940220 -77564333 - L1MB7 LINE L1 -196 5988 5429 702 179 7 26 chr17 11940217 11940368 -77564185 - L1MB7 LINE L1 -1113 5033 4886 * 219 299 15 0 chr17 11942277 11942344 -77562209 - MIR SINE MIR -110 152 85 722 260 80 10 chr17 11942386 11942586 -77561967 - MIR SINE MIR -4 258 45 489 230 69 46 chr17 11943262 11943436 -77561117 + MER5B DNA MER1_type 1 178 0 828 163 16 79 chr17 11943487 11943677 -77560876 - MER5B DNA MER1_type 0 178 1 428 301 21 35 chr17 11944488 11944631 -77559922 + MER5A DNA MER1_type 9 149 -40 450 319 65 11 chr17 11944658 11944843 -77559710 + MIR SINE MIR 47 241 -21 236 237 0 66 chr17 11945138 11945214 -77559339 - MIR SINE MIR 0 262 192 559 199 127 0 chr17 11945433 11945590 -77558963 + MER5A DNA MER1_type 4 183 -6 454 287 33 0 chr17 11945604 11945726 -77558827 - MER5B DNA MER1_type 0 178 53 533 325 137 35 chr17 11946529 11946990 -77557563 + L2 LINE L2 2804 3311 -2 2185 112 6 19 chr17 11947204 11947516 -77557037 - AluSc SINE Alu -1 308 1 245 276 0 0 chr17 11948055 11948113 -77556440 + MER3 DNA MER1_type 40 97 -112 2227 119 0 10 chr17 11948137 11948448 -77556105 - AluSg SINE Alu 0 310 3 1043 195 0 79 chr17 11948691 11948932 -77555621 - MER58A DNA MER1_type -1 223 2 413 266 26 45 chr17 11949428 11949582 -77554971 + L3 LINE CR1 615 765 -812 2141 103 0 67 chr17 11949607 11949936 -77554617 - AluSq SINE Alu -6 307 1 361 220 83 22 chr17 11950600 11950773 -77553780 + MIR SINE MIR 1 187 -63 554 299 41 15 chr17 11951233 11951430 -77553123 - MIR SINE MIR -40 222 21 472 270 152 53 chr17 11953653 11954147 -77550406 - L2 LINE L2 -56 3257 2670 2182 130 0 7 chr17 11954147 11954454 -77550099 - AluSx SINE Alu -7 305 1 472 270 152 53 chr17 11954454 11954584 -77549969 - L2 LINE L2 -643 2670 2554 303 233 117 42 chr17 11954614 11954734 -77549819 - L1MC4 LINE L1 0 8042 7914 644 212 0 17 chr17 11954777 11954956 -77549597 + (CACCAT)n Simple_repeat Simple_repeat 1 176 0 474 301 0 6 chr17 11954956 11955112 -77549441 - L1MC4 LINE L1 -146 7896 7742 370 190 0 13 chr17 11955139 11955218 -77549335 - L2 LINE L2 -803 2511 2434 393 22 0 0 chr17 11955412 11955458 -77549095 + (TC)n Simple_repeat Simple_repeat 1 46 0 351 0 0 0 chr17 11955457 11955496 -77549057 + (CA)n Simple_repeat Simple_repeat 1 39 0 * 409 248 31 62 chr17 11955595 11955724 -77548829 + L2 LINE L2 3148 3272 0 1236 259 161 20 chr17 11955762 11956210 -77548343 - MLT1J LTR MaLR 0 511 1 180 357 63 28 chr17 11957423 11957566 -77546987 + MIR SINE MIR 84 231 -31 245 333 21 0 chr17 11957741 11957834 -77546719 - MIR SINE MIR -89 173 79 228 67 0 0 chr17 11957978 11958008 -77546545 + (GA)n Simple_repeat Simple_repeat 2 31 0 2707 247 81 19 chr17 11959133 11960008 -77544545 - L1M4 LINE L1 -1779 4367 3439 2455 56 7 0 chr17 11960578 11960882 -77543671 - L1PA6 LINE L1 -1 6153 5848 207 433 8 8 chr17 11961506 11961626 -77542927 - MIR3 SINE MIR -86 122 3 205 310 0 0 chr17 11962237 11962295 -77542258 + (CA)n Simple_repeat Simple_repeat 1 58 0 788 236 20 86 chr17 11962339 11962631 -77541922 - MLT1J LTR MaLR -2 509 237 271 231 0 62 chr17 11962688 11962753 -77541800 - MLT1L LTR MaLR -554 61 1 1772 112 0 12 chr17 11964014 11964264 -77540289 - AluSx SINE Alu -13 299 53 606 187 0 0 chr17 11965282 11965389 -77539164 + FRAM SINE Alu 1 99 -77 623 93 0 10 chr17 11965390 11965487 -77539066 + (GGAA)n Simple_repeat Simple_repeat 3 98 0 1497 184 52 4 chr17 11965580 11965847 -77538706 + AluJb SINE Alu 1 280 -32 282 198 0 57 chr17 11965851 11965957 -77538596 + GA-rich Low_complexity Low_complexity 4 103 0 907 178 32 95 chr17 11966063 11966401 -77538152 - L1MC5 LINE L1 -31 7930 7614 271 246 56 56 chr17 11966405 11966531 -77538022 - L1MC/D LINE L1 -1991 5817 5692 400 120 13 40 chr17 11966677 11966752 -77537801 + FAM SINE Alu 104 176 -3 288 321 50 27 chr17 11966847 11967151 -77537402 - L1MC/D LINE L1 -1825 4321 4013 367 270 76 53 chr17 11967279 11967635 -77536918 - L1MC/D LINE L1 -2173 3973 3610 258 116 0 0 chr17 11967736 11967779 -77536774 + (TA)n Simple_repeat Simple_repeat 2 44 0 24 53 0 0 chr17 11968081 11968119 -77536434 + AT_rich Low_complexity Low_complexity 1 38 0 2458 85 0 0 chr17 11968521 11968826 -77535727 - AluY SINE Alu -6 305 1 300 168 30 20 chr17 11969143 11969244 -77535309 + (TTAA)n Simple_repeat Simple_repeat 4 105 0 1480 158 19 68 chr17 11969472 11969540 -77535013 - MLT1B LTR MaLR 0 390 320 2183 88 0 4 chr17 11969540 11969838 -77534715 + AluSc SINE Alu 11 307 0 1480 158 19 68 chr17 11969838 11970079 -77534474 - MLT1B LTR MaLR -70 320 95 1190 141 157 0 chr17 11970088 11970330 -77534223 - L1MA8 LINE L1 -19 6272 5993 669 128 0 9 chr17 11970332 11970441 -77534112 - MLT1B LTR MaLR -257 133 26 584 140 0 0 chr17 11970441 11970534 -77534019 - L1PA8 LINE L1 -146 6026 5934 722 107 0 0 chr17 11970534 11970635 -77533918 + L1PA8 LINE L1 6059 6161 -11 23 0 0 0 chr17 11970635 11970658 -77533895 + AT_rich Low_complexity Low_complexity 1 23 0 267 315 110 46 chr17 11970693 11971001 -77533552 - L2 LINE L2 -268 3045 2714 2327 103 0 0 chr17 11971001 11971301 -77533252 - AluSp SINE Alu -13 300 1 267 315 110 46 chr17 11971301 11971345 -77533208 - L2 LINE L2 -599 2714 2674 218 250 48 65 chr17 11971918 11972042 -77532511 + MIR SINE MIR 141 262 0 2404 96 0 0 chr17 11972058 11972360 -77532193 - AluSc SINE Alu -7 302 1 476 140 11 65 chr17 11972823 11972916 -77531637 - Tigger7 DNA MER2_type 0 2487 2400 2745 181 50 6 chr17 11972919 11973417 -77531136 - Tigger7 DNA MER2_type -1965 522 3 1420 284 99 58 chr17 11973475 11973858 -77530695 - L2 LINE L2 0 3313 2947 2484 76 0 3 chr17 11973858 11974161 -77530392 + AluY SINE Alu 1 302 -9 1420 284 99 58 chr17 11974161 11975410 -77529143 - L2 LINE L2 -366 2947 1611 838 309 73 33 chr17 11975443 11975896 -77528657 - MLT1J LTR MaLR 0 511 41 250 325 48 48 chr17 11975966 11976194 -77528359 - L2 LINE L2 -1741 1573 1346 448 303 166 0 chr17 11976217 11976428 -77528125 - MIR SINE MIR -15 247 2 444 322 82 14 chr17 11976494 11976786 -77527767 - L2 LINE L2 -2050 1264 953 386 111 0 0 chr17 11977156 11977210 -77527343 - MADE1 DNA Mariner 0 80 27 487 260 17 46 chr17 11977416 11977589 -77526964 - MIR SINE MIR 0 262 95 2076 153 44 114 chr17 11977589 11978040 -77526513 - MLT1D LTR MaLR 0 505 97 2383 101 0 7 chr17 11978040 11978348 -77526205 + AluSc SINE Alu 1 306 -3 2076 153 44 114 chr17 11978348 11978439 -77526114 - MLT1D LTR MaLR -408 97 1 418 303 49 27 chr17 11978508 11978693 -77525860 - MER117 DNA MER1_type -3 194 6 228 67 0 0 chr17 11978831 11978861 -77525692 + (T)n Simple_repeat Simple_repeat 1 30 0 2827 70 3 3 chr17 11980018 11980373 -77524180 - THE1A LTR MaLR 0 355 1 271 278 191 19 chr17 11980479 11980641 -77523912 - MIR3 SINE MIR -5 203 14 180 0 0 0 chr17 11981228 11981248 -77523305 + (CAGTG)n Simple_repeat Simple_repeat 1 20 0 301 263 6 0 chr17 11981361 11981544 -77523009 + (TG)n Simple_repeat Simple_repeat 1 184 0 460 288 0 0 chr17 11981558 11981728 -77522825 + (TG)n Simple_repeat Simple_repeat 1 170 0 216 340 33 33 chr17 11983279 11983432 -77521121 + MIR SINE MIR 71 223 -39 270 153 0 0 chr17 11985289 11985348 -77519205 + T-rich Low_complexity Low_complexity 1 59 0 554 270 108 45 chr17 11985522 11985855 -77518698 - MLT1J LTR MaLR -147 364 11 278 275 83 0 chr17 11985877 11985986 -77518567 - L2 LINE L2 -88 3225 3108 217 257 114 0 chr17 11986016 11986086 -77518467 - MIR3 SINE MIR -12 196 119 272 289 44 0 chr17 11986276 11986366 -77518187 - MIR3 SINE MIR -10 198 105 197 311 30 53 chr17 11986707 11986839 -77517714 - L3 LINE CR1 -1113 464 336 1805 147 18 18 chr17 11987151 11987437 -77517116 - AluJo SINE Alu -22 290 5 350 266 101 24 chr17 11988141 11988322 -77516231 - MLT1J LTR MaLR -235 199 20 278 350 23 23 chr17 11988370 11988584 -77515969 - L2 LINE L2 -12 3301 3088 685 278 65 4 chr17 11988621 11988869 -77515684 - L2 LINE L2 -365 2949 2687 2279 96 7 13 chr17 11988869 11989003 -77515550 + AluSg SINE Alu 1 134 -176 2493 78 3 0 chr17 11989003 11989309 -77515244 + AluY SINE Alu 1 307 -4 2279 96 7 13 chr17 11989309 11989477 -77515076 + AluSg SINE Alu 134 301 -9 2142 118 0 0 chr17 11989937 11990250 -77514303 - AluSg SINE Alu 0 313 1 27 62 0 0 chr17 11990443 11990491 -77514062 + AT_rich Low_complexity Low_complexity 1 48 0 487 163 1 0 chr17 11991127 11991221 -77513332 + MER63 DNA MER1_type 656 751 -311 253 313 68 12 chr17 11991313 11991476 -77513077 - L1ME LINE L1 -540 5564 5393 266 269 0 0 chr17 11991794 11991861 -77512692 - L2 LINE L2 -262 3051 2985 21 0 0 0 chr17 11992630 11992651 -77511902 + AT_rich Low_complexity Low_complexity 1 21 0 2322 104 0 13 chr17 11992699 11993016 -77511537 - AluSq SINE Alu 0 313 1 751 311 107 24 chr17 11993032 11993987 -77510566 - L1ME LINE L1 -1389 4740 3707 360 329 120 48 chr17 11994278 11994566 -77509987 - L1ME LINE L1 -2744 3385 3119 246 32 0 0 chr17 11994566 11994597 -77509956 + (TC)n Simple_repeat Simple_repeat 2 32 0 2288 104 0 3 chr17 11994597 11994896 -77509657 - AluSg SINE Alu -12 298 1 360 329 120 48 chr17 11994896 11995290 -77509263 - L1ME LINE L1 -3009 3120 2653 267 306 0 16 chr17 11995786 11995910 -77508643 + CT-rich Low_complexity Low_complexity 3 124 0 27 87 0 0 chr17 11995982 11996051 -77508502 + AT_rich Low_complexity Low_complexity 1 69 0 429 177 44 99 chr17 11996181 11996362 -77508191 - L1MC5 LINE L1 -179 7782 7612 365 343 14 42 chr17 11996817 11996960 -77507593 + L2 LINE L2 3134 3272 0 257 301 10 10 chr17 11997038 11997141 -77507412 - L1ME LINE L1 -4972 1147 1045 2374 82 0 0 chr17 11997251 11997542 -77507011 - AluSx SINE Alu -8 304 14 2219 113 7 0 chr17 11998554 11998846 -77505707 + AluSq SINE Alu 1 294 -19 189 0 0 0 chr17 11998846 11998867 -77505686 + (GA)n Simple_repeat Simple_repeat 2 22 0 270 254 30 15 chr17 11999449 11999516 -77505037 - MLT1J LTR MaLR -333 178 111 1309 265 48 69 chr17 11999641 11999939 -77504614 - L1MEc LINE L1 -3998 2398 2095 1639 91 36 0 chr17 11999939 12000160 -77504393 - MER30 DNA MER1_type 0 230 2 1309 265 48 69 chr17 12000160 12000654 -77503899 - L1MEc LINE L1 -4301 2095 1623 258 179 54 0 chr17 12000686 12000742 -77503811 - L1MC3 LINE L1 0 7785 7727 233 225 84 14 chr17 12001437 12001508 -77503045 - MIR3 SINE MIR -46 162 87 2390 65 7 0 chr17 12001549 12001877 -77502676 + AluSp SINE Alu 1 330 0 242 204 0 0 chr17 12002042 12002096 -77502457 - L1MB8 LINE L1 0 6178 6125 268 297 25 25 chr17 12002544 12002662 -77501891 - L2 LINE L2 0 3272 3155 183 349 20 59 chr17 12002985 12003137 -77501416 - MIR3 SINE MIR -60 148 3 380 266 44 0 chr17 12003921 12004034 -77500519 + MIR3 SINE MIR 87 204 -4 2337 71 10 7 chr17 12004165 12004460 -77500093 + AluY SINE Alu 1 296 -15 315 333 0 10 chr17 12005485 12005587 -77498966 + MIR3 SINE MIR 67 167 -41 1847 119 0 0 chr17 12005720 12006012 -77498541 + AluSx SINE Alu 30 321 0 405 54 0 0 chr17 12006082 12006138 -77498415 + (TC)n Simple_repeat Simple_repeat 1 56 0 27 29 0 0 chr17 12006161 12006195 -77498358 + AT_rich Low_complexity Low_complexity 1 34 0 209 243 149 14 chr17 12006234 12006308 -77498245 + MIR SINE MIR 65 148 -114 196 365 72 12 chr17 12006345 12006512 -77498041 + MIR SINE MIR 3 179 -83 847 271 21 21 chr17 12006523 12006759 -77497794 + MIR SINE MIR 14 249 -13 294 262 103 68 chr17 12006837 12007100 -77497453 - L2 LINE L2 -78 3235 2964 233 146 21 0 chr17 12008067 12008115 -77496438 + CT-rich Low_complexity Low_complexity 2 50 0 721 258 88 46 chr17 12008208 12008468 -77496085 - MLT1K LTR MaLR -220 368 98 240 35 0 0 chr17 12008663 12008692 -77495861 + (GA)n Simple_repeat Simple_repeat 2 30 0 240 276 11 23 chr17 12010153 12010240 -77494313 + CT-rich Low_complexity Low_complexity 4 89 0 535 214 28 20 chr17 12011433 12011647 -77492906 + MER21B LTR ERV1 12 265 -598 186 43 0 0 chr17 12011664 12011687 -77492866 + (TTC)n Simple_repeat Simple_repeat 2 24 0 1907 95 0 0 chr17 12011689 12011930 -77492623 - AluSx SINE Alu -10 302 62 515 133 0 0 chr17 12011930 12012005 -77492548 + AluS SINE Alu 2 76 -237 1430 251 39 78 chr17 12012008 12012545 -77492008 + MER21B LTR ERV1 297 812 -51 375 315 22 7 chr17 12013885 12014034 -77490519 + MIR SINE MIR 21 168 -49 1894 116 27 48 chr17 12014091 12014411 -77490142 + AluSx SINE Alu 1 314 0 581 261 202 44 chr17 12015294 12015635 -77488918 - LTR16C LTR ERVL 0 491 97 2171 77 0 57 chr17 12016566 12016892 -77487661 - AluSc SINE Alu 0 309 1 229 228 89 50 chr17 12017014 12017115 -77487438 + L1ME4a LINE L1 5676 5780 -341 755 62 0 0 chr17 12017258 12017354 -77487199 + L1PA5 LINE L1 6059 6154 0 231 293 49 32 chr17 12017555 12017678 -77486875 + L1ME4a LINE L1 5997 6121 0 766 236 151 46 chr17 12018380 12018840 -77485713 - MLT1H LTR MaLR -7 548 7 269 271 101 96 chr17 12019440 12019505 -77485048 - MIR SINE MIR -62 200 137 2166 128 3 0 chr17 12019505 12019810 -77484743 - AluSx SINE Alu -6 306 1 269 271 101 96 chr17 12019810 12019932 -77484621 - MIR SINE MIR -125 137 12 259 224 26 13 chr17 12021075 12021151 -77483402 - MIR3 SINE MIR -5 203 127 501 269 70 21 chr17 12021523 12021709 -77482844 - LTR16C LTR ERVL 0 491 297 846 139 0 0 chr17 12022050 12022165 -77482388 - AluSq/x SINE Alu -198 115 1 4185 243 74 40 chr17 12022165 12022821 -77481732 - L1M4 LINE L1 -693 5491 4859 4134 143 7 21 chr17 12022821 12023527 -77481026 - L1MA5 LINE L1 -6 6294 5599 4185 243 74 40 chr17 12023527 12024578 -77479975 - L1M4 LINE L1 -1325 4859 3712 468 299 70 0 chr17 12025635 12025822 -77478731 - MIR SINE MIR -14 248 49 201 209 30 0 chr17 12026645 12026712 -77477841 + (TTAA)n Simple_repeat Simple_repeat 2 70 0 227 217 22 0 chr17 12026830 12026876 -77477677 + CT-rich Low_complexity Low_complexity 1 47 0 556 122 0 0 chr17 12028252 12028334 -77476219 - AluSg/x SINE Alu -96 214 133 2381 53 0 3 chr17 12028334 12028656 -77475897 - AluY SINE Alu 0 321 1 4077 65 2 0 chr17 12028988 12029498 -77475055 + L1PA8 LINE L1 5662 6172 0 309 365 28 62 chr17 12029646 12029936 -77474617 + L2 LINE L2 2992 3271 -1 2310 85 3 0 chr17 12031353 12031647 -77472906 + AluSg SINE Alu 1 295 -15 878 200 42 33 chr17 12032141 12032356 -77472197 - MER20 DNA MER1_type -2 217 1 438 294 150 7 chr17 12032370 12032523 -77472030 - MER5A DNA MER1_type -6 183 9 381 306 21 37 chr17 12033675 12033985 -77470568 - LTR33 LTR ERVL -147 374 13 1951 75 0 57 chr17 12035105 12035408 -77469145 + AluY SINE Alu 39 325 0 256 219 0 16 chr17 12035557 12035621 -77468932 - L1ME4a LINE L1 -5 6116 6054 981 233 68 35 chr17 12035710 12036079 -77468474 - L1ME4a LINE L1 -195 5926 5546 2674 154 10 30 chr17 12036199 12036540 -77468013 - L1MB2 LINE L1 -2 6169 5823 2418 75 0 3 chr17 12036540 12036835 -77467718 - AluY SINE Alu -17 294 1 1643 155 44 30 chr17 12036839 12037136 -77467417 - AluSx SINE Alu -11 301 1 2674 154 10 30 chr17 12037136 12037283 -77467270 - L1MB2 LINE L1 -351 5820 5686 5402 48 1 12 chr17 12038014 12038454 -77466099 + L1PA8 LINE L1 5514 5946 -226 2356 101 0 7 chr17 12038454 12038762 -77465791 + AluSg SINE Alu 1 306 -4 5402 48 1 12 chr17 12038762 12038987 -77465566 + L1PA8 LINE L1 5946 6172 0 384 293 80 56 chr17 12039208 12039495 -77465058 - L1ME4a LINE L1 -1312 4834 4541 31 58 0 0 chr17 12039519 12039571 -77464982 + AT_rich Low_complexity Low_complexity 1 52 0 288 231 0 0 chr17 12039905 12039970 -77464583 - L2 LINE L2 -1 3271 3207 1758 177 0 23 chr17 12040317 12040617 -77463936 - AluJo SINE Alu -19 293 1 217 304 47 58 chr17 12040731 12040922 -77463631 + MIR SINE MIR 20 208 -54 2562 170 18 7 chr17 12041840 12042287 -77462266 + MER66A LTR ERV1 27 478 0 1816 203 27 33 chr17 12042306 12043101 -77461452 - L1ME3 LINE L1 -24 6138 5427 282 359 16 31 chr17 12043101 12043293 -77461260 + MIR SINE MIR 20 208 -54 183 184 0 0 chr17 12043333 12043371 -77461182 + (TTA)n Simple_repeat Simple_repeat 1 38 0 2167 127 0 0 chr17 12043450 12043754 -77460799 - AluSx SINE Alu 0 304 1 21 57 0 0 chr17 12043754 12043789 -77460764 + AT_rich Low_complexity Low_complexity 1 35 0 539 328 64 39 chr17 12043943 12044337 -77460216 - L2 LINE L2 -130 3183 2770 1766 165 29 0 chr17 12044337 12044616 -77459937 - AluJb SINE Alu -25 287 1 539 328 64 39 chr17 12044616 12044933 -77459620 - L2 LINE L2 -543 2770 2462 498 192 116 111 chr17 12045022 12045220 -77459333 + MLT1C LTR MaLR 1 199 -191 348 310 209 17 chr17 12045228 12045763 -77458790 - L2 LINE L2 -1470 1844 1207 216 171 0 0 chr17 12046719 12046754 -77457799 + (TAG)n Simple_repeat Simple_repeat 1 35 0 2396 97 0 0 chr17 12046833 12047131 -77457422 - AluSg SINE Alu -12 298 1 274 301 192 19 chr17 12047146 12047302 -77457251 - MIR SINE MIR -73 189 7 200 305 127 0 chr17 12047384 12047510 -77457043 + MIR SINE MIR 35 168 -85 304 371 29 6 chr17 12048113 12048283 -77456270 + MIR3 SINE MIR 30 203 -5 223 308 70 35 chr17 12048862 12049005 -77455548 + MIR3 SINE MIR 22 169 -39 345 280 34 8 chr17 12049672 12049790 -77454763 - MIR SINE MIR -12 250 130 523 280 171 47 chr17 12050175 12050790 -77453763 - L1MC4a LINE L1 -1854 5954 5264 258 314 49 0 chr17 12051392 12051494 -77453059 - HAL1b LINE L1 -752 596 490 221 139 23 0 chr17 12051521 12051564 -77452989 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 1237 267 54 45 chr17 12051829 12052455 -77452098 - L1ME3A LINE L1 -268 5902 5271 230 187 0 67 chr17 12052899 12052974 -77451579 + (TAG)n Simple_repeat Simple_repeat 2 71 0 201 311 33 0 chr17 12053047 12053108 -77451445 - MIR SINE MIR -94 168 106 317 332 56 32 chr17 12053274 12053524 -77451029 - HAL1 LINE L1 -1098 1409 1154 2180 96 10 29 chr17 12054488 12054800 -77449753 - AluSc SINE Alu -3 306 1 770 217 56 22 chr17 12054942 12055122 -77449431 + MER5A DNA MER1_type 2 187 -2 291 145 0 11 chr17 12055400 12055456 -77449097 - Alu SINE Alu -257 44 1 838 194 35 0 chr17 12055613 12055783 -77448770 + MER5A DNA MER1_type 7 182 -7 443 250 23 15 chr17 12055942 12056074 -77448479 + MER5B DNA MER1_type 1 133 -45 876 195 11 26 chr17 12056075 12056265 -77448288 - L1PA11 LINE L1 -12 6162 5976 268 304 36 36 chr17 12056379 12056517 -77448036 - L1ME4a LINE L1 -24 6097 5960 533 136 22 49 chr17 12057267 12057451 -77447102 + (TA)n Simple_repeat Simple_repeat 2 180 0 1690 215 127 25 chr17 12058800 12059289 -77445264 - MLT1F LTR MaLR -3 539 1 314 248 211 0 chr17 12059493 12059602 -77444951 - L2 LINE L2 -5 3267 3136 193 330 20 10 chr17 12059712 12059812 -77444741 - L2 LINE L2 -408 2905 2805 1777 167 3 24 chr17 12060267 12060555 -77443998 - AluJo SINE Alu -30 282 1 2378 110 0 3 chr17 12061105 12061414 -77443139 - AluSx SINE Alu -4 308 1 304 341 127 0 chr17 12062151 12062183 -77442370 - MIR SINE MIR -13 249 222 282 29 0 0 chr17 12062183 12062218 -77442335 + (CATA)n Simple_repeat Simple_repeat 3 37 0 304 341 127 0 chr17 12062218 12062405 -77442148 - MIR SINE MIR -40 222 2 195 186 0 0 chr17 12063001 12063044 -77441509 + GA-rich Low_complexity Low_complexity 2 44 0 615 248 182 48 chr17 12063118 12063620 -77440933 - L2 LINE L2 0 3313 2752 1056 245 103 142 chr17 12063654 12064309 -77440244 - L2 LINE L2 -914 2400 1721 2008 101 4 8 chr17 12064309 12064576 -77439977 + AluSp SINE Alu 40 305 -8 1056 245 103 142 chr17 12064576 12064716 -77439837 - L2 LINE L2 -1593 1721 1577 204 40 0 0 chr17 12064716 12064741 -77439812 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1056 245 103 142 chr17 12064741 12065021 -77439532 - L2 LINE L2 -1737 1577 1366 644 179 18 0 chr17 12065024 12065136 -77439417 - MER81 DNA DNA 0 114 1 459 0 0 0 chr17 12066967 12067018 -77437535 + (TA)n Simple_repeat Simple_repeat 1 51 0 320 196 254 14 chr17 12068379 12068517 -77436036 + MIR SINE MIR 15 185 -77 532 216 136 19 chr17 12068609 12068771 -77435782 + MER5A DNA MER1_type 9 189 0 24 0 0 0 chr17 12068771 12068795 -77435758 + AT_rich Low_complexity Low_complexity 1 24 0 208 274 119 0 chr17 12069878 12069962 -77434591 + MIR3 SINE MIR 105 198 -10 1624 163 58 73 chr17 12070488 12070900 -77433653 + MSTB1 LTR MaLR 27 432 0 287 310 66 51 chr17 12071327 12071659 -77432894 + L2 LINE L2 2360 2696 -618 712 352 72 20 chr17 12071942 12072388 -77432165 + L2 LINE L2 2804 3272 0 191 311 200 0 chr17 12072419 12072509 -77432044 + MIR SINE MIR 33 140 -68 526 190 66 0 chr17 12072869 12072990 -77431563 - L1MC4 LINE L1 0 8042 7914 215 192 19 19 chr17 12073025 12073077 -77431476 + (CATATA)n Simple_repeat Simple_repeat 5 56 0 275 189 0 81 chr17 12073086 12073160 -77431393 - L1MC4 LINE L1 -123 7919 7852 924 70 0 0 chr17 12073166 12073281 -77431272 - AluY SINE Alu 0 311 197 593 202 40 33 chr17 12073281 12073466 -77431087 - L1MC4 LINE L1 -95 7713 7584 1152 272 71 63 chr17 12073472 12073684 -77430869 - L1M4 LINE L1 -1717 4429 4220 2591 71 0 0 chr17 12073684 12073994 -77430559 - AluSq SINE Alu -3 310 1 1152 272 71 63 chr17 12073994 12074579 -77429974 - L1M4 LINE L1 -1926 4220 3625 * 1932 44 0 0 chr17 12074573 12074800 -77429753 - L1P3 LINE L1 -408 5746 5520 2309 66 3 10 chr17 12074800 12075098 -77429455 + L1PA8 LINE L1 5870 6169 -3 315 0 0 0 chr17 12075572 12075607 -77428946 + (TG)n Simple_repeat Simple_repeat 2 36 0 651 285 54 67 chr17 12075621 12076027 -77428526 - HAL1b LINE L1 -714 634 260 2277 104 7 0 chr17 12076769 12077067 -77427486 - AluSc SINE Alu -9 300 1 24 53 0 0 chr17 12077202 12077240 -77427313 + AT_rich Low_complexity Low_complexity 1 38 0 2280 111 0 13 chr17 12077582 12077898 -77426655 - AluSx SINE Alu 0 312 1 240 376 73 13 chr17 12078548 12078862 -77425691 + L2 LINE L2 2429 2761 -553 1732 190 0 10 chr17 12079365 12079665 -77424888 - AluJb SINE Alu -5 307 11 463 323 59 11 chr17 12080759 12080945 -77423608 - MLT1I LTR MaLR -196 213 19 252 329 71 0 chr17 12083278 12083363 -77421190 + MER5A DNA MER1_type 78 168 -21 253 241 101 0 chr17 12083429 12083508 -77421045 - MER5A DNA MER1_type -80 109 23 389 263 38 97 chr17 12083540 12083698 -77420855 - MER5B DNA MER1_type -3 175 28 2242 98 30 0 chr17 12083698 12083994 -77420559 + AluSg SINE Alu 1 305 -5 389 263 38 97 chr17 12083994 12084021 -77420532 - MER5B DNA MER1_type -150 28 1 244 232 56 99 chr17 12084762 12084904 -77419649 + L2 LINE L2 3137 3272 0 995 247 20 12 chr17 12085262 12085513 -77419040 - MIR SINE MIR 0 262 10 1284 149 5 0 chr17 12086452 12086640 -77417913 + MER5A DNA MER1_type 1 189 0 2206 104 37 0 chr17 12087611 12087910 -77416643 + AluSg SINE Alu 1 310 0 534 317 82 0 chr17 12088484 12088667 -77415886 - MIR SINE MIR -18 244 47 750 231 11 2 chr17 12088892 12089072 -77415481 + MER5A DNA MER1_type 5 178 0 2480 80 0 0 chr17 12089133 12089444 -77415109 - AluY SINE Alu 0 311 1 2417 93 0 0 chr17 12089573 12089873 -77414680 - AluSx SINE Alu -12 300 1 391 271 78 26 chr17 12090299 12090491 -77414062 + MIR SINE MIR 48 249 -13 1615 77 0 0 chr17 12090716 12090912 -77413641 - AluY SINE Alu -10 301 106 272 179 221 0 chr17 12091665 12091760 -77412793 - MLT1H LTR MaLR -13 536 421 837 238 35 53 chr17 12091829 12092111 -77412442 - MLT1H LTR MaLR -251 298 22 423 176 20 26 chr17 12092208 12092361 -77412192 + CT-rich Low_complexity Low_complexity 3 154 0 2326 80 26 7 chr17 12092982 12093284 -77411269 + AluSg SINE Alu 1 308 -2 403 247 73 7 chr17 12093317 12093467 -77411086 - MIR SINE MIR -1 261 102 205 219 16 16 chr17 12093873 12093937 -77410616 + (TTG)n Simple_repeat Simple_repeat 3 66 0 1387 225 21 56 chr17 12094009 12094387 -77410166 - MLT1A1 LTR MaLR 0 365 1 289 262 10 19 chr17 12094475 12094578 -77409975 + MER103 DNA DNA 54 155 -11 336 291 196 10 chr17 12094981 12095180 -77409373 - MIR SINE MIR -6 256 21 29 47 0 0 chr17 12095180 12095223 -77409330 + AT_rich Low_complexity Low_complexity 1 43 0 242 355 16 33 chr17 12096650 12096771 -77407782 + MIR SINE MIR 48 166 -96 1668 39 0 10 chr17 12097197 12097403 -77407150 + L1PA4 LINE L1 5949 6152 -3 201 169 0 0 chr17 12097406 12097448 -77407105 + A-rich Low_complexity Low_complexity 1 77 0 25 51 0 0 chr17 12097492 12097531 -77407022 + AT_rich Low_complexity Low_complexity 1 39 0 2142 115 0 0 chr17 12098098 12098402 -77406151 + AluSx SINE Alu 1 304 -8 269 350 83 6 chr17 12098868 12099025 -77405528 - LTR67 LTR ERVL -263 294 126 1927 119 0 39 chr17 12100646 12100957 -77403596 + AluSx SINE Alu 1 299 -13 254 206 16 0 chr17 12101383 12101446 -77403107 + (TA)n Simple_repeat Simple_repeat 2 65 0 390 21 0 0 chr17 12101499 12101546 -77403007 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 439 278 57 60 chr17 12101997 12102346 -77402207 + L1MEd LINE L1 862 1209 -4910 415 277 46 75 chr17 12102359 12102637 -77401916 + L1MEd LINE L1 1330 1655 -835 21 0 0 0 chr17 12102875 12102896 -77401657 + AT_rich Low_complexity Low_complexity 1 21 0 2207 75 7 19 chr17 12102898 12103205 -77401348 + AluY SINE Alu 1 303 -8 238 188 125 31 chr17 12103213 12103309 -77401244 + L1MC4 LINE L1 7938 8042 0 369 235 102 30 chr17 12103482 12103648 -77400905 + MIR3 SINE MIR 7 184 -24 793 328 42 56 chr17 12103723 12104297 -77400256 - MLT1K LTR MaLR -10 578 13 1991 109 0 3 chr17 12105303 12105609 -77398944 - AluSg SINE Alu 0 305 1 210 71 0 0 chr17 12105778 12105806 -77398747 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 412 274 122 17 chr17 12106208 12106445 -77398108 - MIR SINE MIR 0 262 1 1786 234 106 48 chr17 12106745 12106952 -77397601 - MLT1E LTR MaLR 0 593 400 2389 70 0 16 chr17 12106952 12107265 -77397288 - AluY SINE Alu -3 308 1 1786 234 106 48 chr17 12107265 12107604 -77396949 - MLT1E LTR MaLR -193 400 15 1929 108 0 34 chr17 12107675 12107990 -77396563 + AluSp SINE Alu 1 305 0 222 37 0 0 chr17 12107991 12108018 -77396535 + (CAAT)n Simple_repeat Simple_repeat 1 27 0 372 318 56 16 chr17 12108231 12108357 -77396196 - MIR SINE MIR -58 150 20 807 263 129 54 chr17 12108366 12108739 -77395814 + MLT1I LTR MaLR 6 406 -3 203 0 37 0 chr17 12109972 12109999 -77394554 + (CAAAAA)n Simple_repeat Simple_repeat 5 32 0 327 286 0 20 chr17 12110692 12110790 -77393763 - LTR67 LTR ERVL -3 554 459 2434 142 7 30 chr17 12110822 12111258 -77393295 + L1MB8 LINE L1 5748 6173 -5 3696 68 0 2 chr17 12111264 12111731 -77392822 - L1PA7 LINE L1 -6 6148 5683 782 53 0 0 chr17 12111731 12111825 -77392728 + L1PA7 LINE L1 5559 5652 -479 183 150 117 117 chr17 12111982 12112042 -77392511 + L2 LINE L2 3169 3228 -85 2005 146 0 3 chr17 12112230 12112539 -77392014 - AluSg SINE Alu -2 308 1 1002 161 36 0 chr17 12113107 12113275 -77391278 + MLT1A2 LTR MaLR 1 174 -200 276 111 0 0 chr17 12113286 12113331 -77391222 + (TC)n Simple_repeat Simple_repeat 2 46 0 202 182 0 0 chr17 12114321 12114354 -77390199 + polypyrimidine Low_complexity Low_complexity 1 33 0 953 208 15 15 chr17 12114364 12114561 -77389992 + MLT1A2 LTR MaLR 194 390 0 281 299 99 50 chr17 12114670 12114891 -77389662 + L2 LINE L2 3081 3312 -1 1553 172 35 118 chr17 12116491 12116916 -77387637 - MLT1B LTR MaLR 0 390 1 632 225 135 52 chr17 12117045 12117312 -77387241 - LTR16A1 LTR ERVL -6 451 163 250 286 14 14 chr17 12117691 12117761 -77386792 + MIR SINE MIR 34 103 -159 279 310 39 39 chr17 12118245 12118374 -77386179 - L2 LINE L2 0 3313 3185 188 298 67 48 chr17 12118689 12118793 -77385760 + MIR SINE MIR 32 137 -125 184 406 16 8 chr17 12119567 12119695 -77384858 + L3 LINE CR1 1362 1490 -87 792 235 81 7 chr17 12120601 12120842 -77383711 + MIR SINE MIR 7 260 -2 529 263 78 39 chr17 12121710 12121889 -77382664 + MIR SINE MIR 73 258 -4 192 77 0 0 chr17 12121898 12121924 -77382629 + (TAG)n Simple_repeat Simple_repeat 1 26 0 308 200 40 40 chr17 12121960 12122035 -77382518 + L2 LINE L2 3235 3309 -4 2072 130 10 0 chr17 12122213 12122521 -77382032 + AluSx SINE Alu 1 311 -1 191 86 0 29 chr17 12122748 12122783 -77381770 + (CAAAAA)n Simple_repeat Simple_repeat 6 39 0 857 234 18 31 chr17 12123312 12123538 -77381015 - MLT1A1 LTR MaLR -142 223 1 512 353 32 64 chr17 12123771 12123992 -77380561 - L2 LINE L2 -6 3266 3058 2194 103 0 0 chr17 12123992 12124294 -77380259 - AluSg SINE Alu 0 310 9 512 353 32 64 chr17 12124294 12124418 -77380135 - L2 LINE L2 -214 3058 2932 458 156 44 11 chr17 12124428 12124518 -77380035 + L1MD2 LINE L1 6059 6151 -208 188 322 133 0 chr17 12126311 12126401 -77378152 - MIR SINE MIR -3 259 158 1593 155 14 17 chr17 12126425 12126721 -77377832 + AluJo SINE Alu 1 295 -17 2011 104 11 0 chr17 12126723 12127002 -77377551 + AluSq SINE Alu 1 282 -31 2012 129 3 19 chr17 12127336 12127653 -77376900 + AluSx SINE Alu 1 312 0 1562 227 89 18 chr17 12127803 12128062 -77376491 - MLT1C LTR MaLR 0 467 163 2377 57 0 7 chr17 12128062 12128362 -77376191 - AluY SINE Alu -13 298 1 1562 227 89 18 chr17 12128362 12128538 -77376015 - MLT1C LTR MaLR -304 163 1 1690 115 0 8 chr17 12128551 12128795 -77375758 + AluSq SINE Alu 1 242 -71 669 95 11 0 chr17 12128795 12128890 -77375663 + AluSp/q SINE Alu 207 302 -11 24 0 0 0 chr17 12129166 12129190 -77375363 + AT_rich Low_complexity Low_complexity 1 24 0 391 296 136 43 chr17 12129543 12129823 -77374730 - L2 LINE L2 0 3313 3008 590 288 43 26 chr17 12129861 12130094 -77374459 + L3 LINE CR1 1297 1533 -44 203 278 139 14 chr17 12130094 12130166 -77374387 + L3 LINE CR1 1492 1572 -5 609 149 22 33 chr17 12130798 12130979 -77373574 + CT-rich Low_complexity Low_complexity 2 180 0 366 170 20 20 chr17 12131060 12131160 -77373393 + CT-rich Low_complexity Low_complexity 1 100 0 23 33 0 0 chr17 12131812 12131842 -77372711 + AT_rich Low_complexity Low_complexity 1 30 0 1011 206 15 0 chr17 12131881 12132080 -77372473 + L1ME1 LINE L1 5792 5993 -173 584 188 17 7 chr17 12132078 12132228 -77372325 - L1MC/D LINE L1 -469 5697 5587 * 800 286 150 48 chr17 12132293 12133064 -77371489 + L2 LINE L2 2423 3298 -15 2095 104 0 0 chr17 12133064 12133377 -77371176 + AluY SINE Alu 1 313 0 800 286 150 48 chr17 12133377 12133395 -77371158 + L2 LINE L2 3298 3313 0 427 223 97 10 chr17 12133468 12133571 -77370982 + MIR SINE MIR 140 251 -11 204 289 0 0 chr17 12134428 12134480 -77370073 + MER91A DNA MER1_type 11 62 -134 233 366 145 0 chr17 12134602 12134733 -77369820 + MIR3 SINE MIR 14 163 -45 2097 104 0 36 chr17 12135626 12135933 -77368620 + AluSg SINE Alu 1 296 -14 2290 90 0 0 chr17 12135980 12136279 -77368274 + AluY SINE Alu 1 299 -12 423 281 7 22 chr17 12136946 12137081 -77367472 + MIR SINE MIR 63 195 -67 2261 61 0 45 chr17 12137100 12137413 -77367140 + AluY SINE Alu 1 299 -12 427 275 7 144 chr17 12137426 12137731 -77366822 + L2 LINE L2 3009 3271 -1 549 277 116 18 chr17 12138204 12138428 -77366125 + L3b LINE CR1 1139 1384 -199 2076 92 4 0 chr17 12138562 12138855 -77365698 - AluSp SINE Alu 0 306 13 28 29 0 0 chr17 12139243 12139278 -77365275 + AT_rich Low_complexity Low_complexity 1 35 0 2288 79 0 0 chr17 12139305 12139596 -77364957 + AluY SINE Alu 14 304 -7 2887 187 26 6 chr17 12139602 12140137 -77364416 - MER74A LTR ERVL -12 546 1 2009 110 3 23 chr17 12140785 12141086 -77363467 - AluSx SINE Alu 0 312 18 652 280 48 0 chr17 12141331 12141499 -77363054 + MIR SINE MIR 87 262 0 479 276 31 33 chr17 12141718 12141966 -77362587 - L1MC4a LINE L1 -123 5998 5734 1961 152 0 0 chr17 12142090 12142393 -77362160 - AluJo SINE Alu -9 303 1 2196 85 10 0 chr17 12142837 12143131 -77361422 + AluSq SINE Alu 1 297 -16 730 163 47 0 chr17 12143592 12143721 -77360832 - AluJb SINE Alu -21 291 157 518 196 122 0 chr17 12144608 12144715 -77359838 - MLT1D LTR MaLR -384 121 2 341 289 12 0 chr17 12145366 12145449 -77359104 - L2 LINE L2 0 3272 3189 247 288 42 93 chr17 12146159 12146277 -77358276 - MIR3 SINE MIR -3 205 94 2219 87 16 10 chr17 12146915 12147224 -77357329 + AluSx SINE Alu 1 311 -1 1990 177 174 0 chr17 12147295 12147725 -77356828 + MLT1D LTR MaLR 1 505 0 1449 179 50 64 chr17 12148019 12148376 -77356177 + MLT1B LTR MaLR 15 366 -24 325 289 26 39 chr17 12148983 12149104 -77355449 - LTR33 LTR ERVL -65 456 336 2399 98 3 0 chr17 12149104 12149410 -77355143 + AluSx SINE Alu 1 307 -5 325 289 26 39 chr17 12149410 12149444 -77355109 - LTR33 LTR ERVL -185 336 303 284 271 0 12 chr17 12149690 12149775 -77354778 + L2 LINE L2 2985 3068 -245 2884 152 31 2 chr17 12149948 12150434 -77354119 - L1MC1 LINE L1 0 6613 6114 1273 208 0 8 chr17 12150435 12150671 -77353882 - AluJo SINE Alu -74 238 5 3521 159 40 12 chr17 12150675 12151501 -77353052 - L1MC1 LINE L1 -505 6108 5260 641 198 69 85 chr17 12151501 12151800 -77352753 - MLT1A1 LTR MaLR -47 349 37 3001 90 3 4 chr17 12151921 12152666 -77351887 - L1PA8 LINE L1 -4 6168 5227 7847 208 76 68 chr17 12152668 12155600 -77348953 - L1MC1 LINE L1 -1181 5245 2337 7940 19 0 0 chr17 12155600 12157151 -77347402 - L1PA2 LINE L1 -5 6150 4600 7847 208 76 68 chr17 12157151 12157352 -77347201 - L1MC1 LINE L1 -4089 2337 2139 534 100 0 0 chr17 12157352 12157422 -77347131 + AluSg/x SINE Alu 219 288 -22 7847 208 76 68 chr17 12157422 12157442 -77347111 - L1MC1 LINE L1 -4287 2139 2121 3054 59 0 0 chr17 12157442 12157817 -77346736 + L1PA8 LINE L1 5798 6172 0 7847 208 76 68 chr17 12157817 12157915 -77346638 - L1MC1 LINE L1 -4305 2121 2025 203 88 29 0 chr17 12157915 12157949 -77346604 + (TA)n Simple_repeat Simple_repeat 1 35 0 7847 208 76 68 chr17 12157949 12158544 -77346009 - L1MC1 LINE L1 -4401 2025 1295 189 107 0 0 chr17 12158566 12158594 -77345959 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 1991 154 0 0 chr17 12159173 12159459 -77345094 + AluSx SINE Alu 1 286 -26 279 0 0 0 chr17 12159506 12159513 -77345040 + (TG)n Simple_repeat Simple_repeat 1 38 0 279 0 0 0 chr17 12159513 12159544 -77345009 + (TG)n Simple_repeat Simple_repeat 2 32 0 23 54 0 0 chr17 12159621 12159658 -77344895 + AT_rich Low_complexity Low_complexity 1 37 0 2291 111 0 0 chr17 12159670 12159967 -77344586 - AluSg SINE Alu -13 297 1 317 268 63 90 chr17 12160360 12160659 -77343894 + HAL1b LINE L1 277 567 -781 309 250 114 81 chr17 12161038 12161196 -77343357 + L1MDa LINE L1 2308 2459 -4081 2398 91 3 0 chr17 12161196 12161492 -77343061 + AluSp SINE Alu 1 297 -16 309 250 114 81 chr17 12161492 12161665 -77342888 + L1MDa LINE L1 2459 2650 -3890 1625 149 8 0 chr17 12161874 12162116 -77342437 + AluJo SINE Alu 23 266 -46 2233 124 7 0 chr17 12162576 12162875 -77341678 - AluSx SINE Alu -11 301 1 259 296 64 40 chr17 12164514 12164639 -77339914 + L2 LINE L2 3136 3263 -9 913 226 61 5 chr17 12165087 12165299 -77339254 + MER58A DNA MER1_type 1 224 0 302 275 11 22 chr17 12166467 12166558 -77337995 - MIR3 SINE MIR -30 178 89 1057 269 90 79 chr17 12166618 12167115 -77337438 - MLT1K LTR MaLR 0 588 26 192 265 93 74 chr17 12167658 12167820 -77336733 - MIR SINE MIR -52 210 46 1004 158 12 122 chr17 12167878 12168124 -77336429 + MER20 DNA MER1_type 1 219 0 1424 141 4 63 chr17 12169473 12169742 -77334811 - AluJo SINE Alu -21 291 39 2316 94 3 3 chr17 12169947 12170245 -77334308 - AluSc SINE Alu -11 298 1 193 325 16 71 chr17 12170560 12170686 -77333867 + MIR3 SINE MIR 9 127 -81 2201 133 3 0 chr17 12171394 12171703 -77332850 - AluSx SINE Alu -2 310 1 204 40 0 0 chr17 12171758 12171783 -77332770 + (CA)n Simple_repeat Simple_repeat 1 25 0 618 247 80 0 chr17 12172975 12173137 -77331416 + MER5B DNA MER1_type 2 176 -2 365 292 0 0 chr17 12173189 12173278 -77331275 + MER81 DNA DNA 25 113 -1 185 250 0 0 chr17 12173401 12173445 -77331108 + MIR SINE MIR 58 101 -161 432 82 0 0 chr17 12174149 12174210 -77330343 + (TCCA)n Simple_repeat Simple_repeat 3 63 0 2508 75 0 3 chr17 12174634 12174942 -77329611 + AluSg SINE Alu 1 307 -3 655 258 81 10 chr17 12174954 12175163 -77329390 - MER102a DNA MER1_type -28 302 79 371 317 7 28 chr17 12175494 12175636 -77328917 - L2 LINE L2 -583 2731 2593 216 218 0 36 chr17 12176577 12176594 -77327959 + GA-rich Low_complexity Low_complexity 5 21 -36 1415 166 12 0 chr17 12176594 12176841 -77327712 + L1MA4 LINE L1 6046 6295 -5 216 218 0 36 chr17 12176841 12176878 -77327675 + GA-rich Low_complexity Low_complexity 21 57 0 272 251 109 59 chr17 12176882 12177117 -77327436 + MIR SINE MIR 3 259 -3 2095 152 0 13 chr17 12177862 12178178 -77326375 - AluSx SINE Alu 0 312 1 341 226 105 16 chr17 12178617 12178741 -77325812 - MIR3 SINE MIR -28 180 46 911 194 91 0 chr17 12178806 12178992 -77325561 - MER3 DNA MER1_type 0 209 7 527 296 106 5 chr17 12179072 12179271 -77325282 - MIR SINE MIR -32 230 12 2302 75 4 0 chr17 12179292 12179570 -77324983 - AluSq SINE Alu -16 297 19 251 71 24 0 chr17 12179865 12179907 -77324646 + (GA)n Simple_repeat Simple_repeat 2 44 0 2863 10 0 0 chr17 12180304 12180609 -77323944 + AluY SINE Alu 1 305 -6 2246 118 3 0 chr17 12180622 12180928 -77323625 + AluSx SINE Alu 1 307 -5 591 203 7 28 chr17 12181260 12181403 -77323150 - MIR3 SINE MIR -19 189 50 279 267 20 30 chr17 12184393 12184494 -77320059 + CT-rich Low_complexity Low_complexity 2 101 0 423 345 82 0 chr17 12185201 12185395 -77319158 + MIR SINE MIR 51 260 -2 200 281 34 45 chr17 12186277 12186366 -77318187 + MIR3 SINE MIR 3 90 -118 1039 161 144 69 chr17 12186366 12186657 -77317896 - MLT1A1 LTR MaLR 0 365 53 357 109 0 0 chr17 12186714 12186769 -77317784 + (TCCCC)n Simple_repeat Simple_repeat 5 59 0 455 316 123 8 chr17 12186900 12187153 -77317400 - L2 LINE L2 -1 3312 3031 194 235 274 20 chr17 12187556 12187658 -77316895 - MIR SINE MIR -50 212 85 195 273 15 30 chr17 12188355 12188421 -77316132 + L2 LINE L2 2989 3053 -219 195 343 49 20 chr17 12188818 12188920 -77315633 + MIR3 SINE MIR 9 113 -95 555 279 69 25 chr17 12189054 12189258 -77315295 + MIR SINE MIR 14 226 -36 2951 58 3 11 chr17 12189262 12189642 -77314911 + L1PA8 LINE L1 5793 6169 -3 244 164 66 16 chr17 12189684 12189745 -77314808 + L1M4 LINE L1 5725 5788 -396 276 271 193 29 chr17 12190125 12190265 -77314288 + MIR3 SINE MIR 30 192 -16 21 57 0 0 chr17 12190743 12190778 -77313775 + AT_rich Low_complexity Low_complexity 1 35 0 441 265 193 16 chr17 12190868 12191246 -77313307 - L1ME4a LINE L1 -122 5999 5555 407 186 25 8 chr17 12191346 12191464 -77313089 + (TA)n Simple_repeat Simple_repeat 1 120 0 377 244 57 8 chr17 12191469 12191592 -77312961 - L1P4 LINE L1 -707 5467 5339 474 169 0 0 chr17 12193364 12193447 -77311106 + AluS SINE Alu 228 310 -2 547 69 46 0 chr17 12193458 12193545 -77311008 + GA-rich Low_complexity Low_complexity 3 93 0 820 244 67 8 chr17 12193608 12193862 -77310691 - LTR16A1 LTR ERVL 0 457 189 360 269 50 25 chr17 12194675 12194794 -77309759 + MER63 DNA MER1_type 1 748 -88 277 272 12 0 chr17 12194798 12194879 -77309674 + MER63 DNA MER1_type 978 1059 -2 2648 103 69 2 chr17 12195288 12195694 -77308859 - MER4C LTR ERV1 -21 444 12 1728 150 4 11 chr17 12195701 12195981 -77308572 - AluJo SINE Alu -34 278 1 264 278 191 41 chr17 12196292 12196486 -77308067 + MIR SINE MIR 14 236 -26 345 82 0 0 chr17 12196621 12196670 -77307883 + (CA)n Simple_repeat Simple_repeat 2 50 0 1532 294 145 49 chr17 12196689 12196801 -77307752 + L2 LINE L2 1196 1296 -2018 597 210 27 75 chr17 12196801 12196987 -77307566 + MER5B DNA MER1_type 1 177 -1 1532 294 145 49 chr17 12196987 12197379 -77307174 + L2 LINE L2 1296 1649 -1665 2374 197 13 6 chr17 12197379 12197852 -77306701 + L1MB3 LINE L1 5706 6181 -2 1532 294 145 49 chr17 12197852 12198661 -77305892 + L2 LINE L2 1649 2637 -677 581 274 73 51 chr17 12198860 12199214 -77305339 + L2 LINE L2 2949 3310 -3 1766 143 6 73 chr17 12199681 12199995 -77304558 + AluJo SINE Alu 4 296 -16 22 0 0 54 chr17 12200114 12200131 -77304422 + AT_rich Low_complexity Low_complexity 1 17 -18 2503 81 0 0 chr17 12200131 12200441 -77304112 - AluY SINE Alu -1 310 1 22 0 0 54 chr17 12200441 12200460 -77304093 + AT_rich Low_complexity Low_complexity 17 35 0 929 172 12 24 chr17 12200463 12200632 -77303921 - AluJ SINE Alu -33 279 113 399 102 0 0 chr17 12200837 12200896 -77303657 - AluJ SINE Alu -197 105 47 2502 86 0 3 chr17 12201900 12202291 -77302262 + AluSp SINE Alu 1 390 0 2388 99 3 6 chr17 12202661 12202975 -77301578 - AluSq SINE Alu 0 313 1 2461 84 0 0 chr17 12203529 12203838 -77300715 + AluSc SINE Alu 1 309 0 1649 168 48 20 chr17 12203910 12204202 -77300351 + AluJb SINE Alu 1 300 -12 504 128 8 96 chr17 12204976 12205057 -77299496 - L1MA4A LINE L1 -5 6298 6230 504 0 0 0 chr17 12205057 12205113 -77299440 + (TA)n Simple_repeat Simple_repeat 2 57 0 504 128 8 96 chr17 12205113 12205156 -77299397 - L1MA4A LINE L1 -73 6230 6185 881 237 56 19 chr17 12205792 12206007 -77298546 + MER58A DNA MER1_type 2 224 0 23 0 0 0 chr17 12206376 12206399 -77298154 + AT_rich Low_complexity Low_complexity 1 23 0 2356 92 0 19 chr17 12207087 12207403 -77297150 + AluSg SINE Alu 1 310 0 234 281 96 15 chr17 12208308 12208443 -77296110 + L1ME LINE L1 5629 5774 -347 513 32 0 0 chr17 12209388 12209451 -77295102 + (TG)n Simple_repeat Simple_repeat 2 64 0 549 239 46 0 chr17 12209696 12209826 -77294727 + MIR SINE MIR 79 214 -48 1430 147 12 4 chr17 12209911 12210163 -77294390 + L1MA7 LINE L1 6038 6291 0 217 267 0 0 chr17 12210650 12210695 -77293858 + (TG)n Simple_repeat Simple_repeat 2 46 0 225 0 0 0 chr17 12210916 12210941 -77293612 + (T)n Simple_repeat Simple_repeat 1 25 0 2473 69 3 0 chr17 12211764 12212067 -77292486 - AluY SINE Alu -7 304 1 2042 104 3 92 chr17 12212146 12212484 -77292069 - AluSq SINE Alu -5 308 1 234 366 37 25 chr17 12212769 12212930 -77291623 - L2 LINE L2 -162 3110 2948 2204 108 0 19 chr17 12213024 12213338 -77291215 + AluSc SINE Alu 1 308 -1 300 292 200 31 chr17 12213840 12214035 -77290518 + MIR SINE MIR 1 228 -34 248 0 31 0 chr17 12214062 12214094 -77290459 + (TG)n Simple_repeat Simple_repeat 2 34 0 414 181 0 0 chr17 12214094 12214199 -77290354 + (TA)n Simple_repeat Simple_repeat 1 105 0 2112 103 4 11 chr17 12216226 12216537 -77288016 - AluSg SINE Alu 0 309 1 298 299 86 46 chr17 12216759 12216933 -77287620 + MER5A DNA MER1_type 9 189 0 2138 117 0 3 chr17 12217092 12217418 -77287135 - AluSx SINE Alu 0 325 1 207 297 0 0 chr17 12217609 12217673 -77286880 + (CA)n Simple_repeat Simple_repeat 1 64 0 928 318 98 13 chr17 12218357 12218829 -77285724 + LTR33 LTR ERVL 1 512 -9 356 226 96 17 chr17 12218853 12218968 -77285585 + MER103 DNA DNA 34 157 -9 405 239 99 0 chr17 12219152 12219279 -77285274 + MIR3 SINE MIR 9 160 -48 573 266 56 48 chr17 12220081 12220333 -77284220 + L1M4 LINE L1 29 282 -6577 882 226 42 49 chr17 12220411 12220698 -77283855 + L1M4 LINE L1 2222 2506 -4632 281 245 133 40 chr17 12221453 12221604 -77282949 + L1M4 LINE L1 2660 2824 -4314 1653 228 23 56 chr17 12221609 12222165 -77282388 + L1M4 LINE L1 5276 5813 -1144 4893 182 36 33 chr17 12222172 12222855 -77281698 + L1MD1 LINE L1 4922 5603 -639 2398 86 0 3 chr17 12222855 12223159 -77281394 + AluY SINE Alu 1 303 -8 4893 182 36 33 chr17 12223159 12223767 -77280786 + L1MD1 LINE L1 5603 6208 -34 1451 278 108 25 chr17 12223768 12224289 -77280264 - MLT1G1 LTR MaLR -28 567 4 792 316 41 49 chr17 12224653 12224815 -77279738 + L1M4b LINE L1 3045 3207 -3750 2202 103 3 29 chr17 12224815 12225126 -77279427 + AluSx SINE Alu 1 303 -9 792 316 41 49 chr17 12225126 12225998 -77278555 + L1M4b LINE L1 3207 4070 -2887 578 316 19 5 chr17 12226205 12226411 -77278142 + MIR SINE MIR 15 223 -39 213 39 0 0 chr17 12226617 12226643 -77277910 + (TA)n Simple_repeat Simple_repeat 2 27 0 238 287 11 23 chr17 12227161 12227248 -77277305 - L1MC/D LINE L1 -2058 5750 5665 268 196 0 0 chr17 12227293 12227339 -77277214 + L1MB8 LINE L1 5668 5713 -2095 2231 111 0 7 chr17 12228234 12228531 -77276022 - AluSg SINE Alu -15 295 1 188 240 20 0 chr17 12229502 12229552 -77275001 - MIR SINE MIR -131 77 27 472 182 30 10 chr17 12235618 12235717 -77268836 + MER5A DNA MER1_type 9 109 -80 196 240 281 10 chr17 12235646 12235742 -77268811 - MER5A DNA MER1_type -26 163 42 * 201 214 14 43 chr17 12236483 12236553 -77268000 + (CGGGG)n Simple_repeat Simple_repeat 5 72 0 270 81 0 0 chr17 12239087 12239124 -77265429 + (GGGA)n Simple_repeat Simple_repeat 4 40 0 518 259 99 12 chr17 12240758 12240920 -77263633 + MIR3 SINE MIR 19 194 -14 498 271 63 24 chr17 12242307 12242514 -77262039 + L1MB8 LINE L1 5955 6169 -9 351 20 0 59 chr17 12242602 12242653 -77261900 - MADE1 DNA Mariner -1 79 32 399 91 0 0 chr17 12242671 12242726 -77261827 - MADE1 DNA Mariner -25 55 1 204 40 0 0 chr17 12243402 12243427 -77261126 + (CA)n Simple_repeat Simple_repeat 2 26 0 274 175 88 25 chr17 12244244 12244324 -77260229 + MIR3 SINE MIR 111 195 -13 425 345 0 24 chr17 12244466 12244631 -77259922 + MIR3 SINE MIR 23 183 -25 845 228 11 0 chr17 12245305 12245489 -77259064 + MER5A DNA MER1_type 1 186 -3 2360 69 0 20 chr17 12245720 12246023 -77258530 + AluSc SINE Alu 1 297 -12 728 306 73 38 chr17 12246321 12246716 -77257837 - MLT1I LTR MaLR 0 409 1 1598 195 27 27 chr17 12247967 12248336 -77256217 - Charlie1b DNA MER1_type -1 522 154 376 281 8 16 chr17 12249140 12249261 -77255292 - MIR SINE MIR 0 262 143 2372 86 0 0 chr17 12249560 12249852 -77254701 + AluSx SINE Alu 1 292 -20 200 227 0 0 chr17 12250015 12250059 -77254494 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1121 238 33 0 chr17 12250254 12250464 -77254089 + Tigger5 DNA MER2_type 2 218 -2105 1599 144 8 8 chr17 12250475 12250738 -77253815 + Tigger5 DNA MER2_type 2061 2323 0 2341 96 7 0 chr17 12251367 12251668 -77252885 + AluSp SINE Alu 3 305 -8 4076 105 2 2 chr17 12252990 12253544 -77251009 + MER41A LTR ERV1 1 554 0 560 249 75 0 chr17 12254474 12254647 -77249906 + MIR SINE MIR 69 254 -8 198 0 0 0 chr17 12254839 12254861 -77249692 + (TA)n Simple_repeat Simple_repeat 2 23 0 320 222 0 0 chr17 12254861 12254924 -77249629 - L1MEc LINE L1 -6298 98 36 649 211 8 0 chr17 12255009 12255137 -77249416 + L1MEc LINE L1 109 237 -6159 589 132 0 19 chr17 12255138 12255244 -77249309 + L1ME1 LINE L1 5191 5294 -852 1836 157 0 20 chr17 12255247 12255547 -77249006 + AluJo SINE Alu 1 294 -18 221 234 26 13 chr17 12255642 12255719 -77248834 + A-rich Low_complexity Low_complexity 2 79 0 2319 200 69 95 chr17 12255723 12256167 -77248386 + L1ME1 LINE L1 5314 5725 -441 930 138 0 0 chr17 12256167 12256341 -77248212 + (TA)n Simple_repeat Simple_repeat 1 174 0 2319 200 69 95 chr17 12256341 12256767 -77247786 + L1ME1 LINE L1 5725 6161 -5 411 21 0 0 chr17 12256884 12256932 -77247621 + (TA)n Simple_repeat Simple_repeat 2 49 0 351 0 0 0 chr17 12257029 12257068 -77247485 + (TA)n Simple_repeat Simple_repeat 1 39 0 523 271 151 9 chr17 12257448 12257666 -77246887 + MIR SINE MIR 1 249 -13 1480 227 106 31 chr17 12258199 12258586 -77245967 - MLT2B1 LTR ERVL -104 416 1 549 196 0 6 chr17 12259292 12259435 -77245118 + MER89 LTR ERV1 1 241 -318 1856 210 31 3 chr17 12259435 12259788 -77244765 + MLT2B2 LTR ERVL 1 363 -152 713 169 0 24 chr17 12259766 12259890 -77244663 - MLT1A1 LTR MaLR -34 331 211 * 1758 156 0 0 chr17 12259892 12260149 -77244404 + ERVL LTR ERVL 4630 4886 -878 766 217 6 19 chr17 12260149 12260300 -77244253 - MLT2B3 LTR ERVL -166 388 240 5568 188 80 42 chr17 12260300 12261609 -77242944 - MER52A LTR ERV1 0 1755 319 234 246 31 0 chr17 12262174 12262239 -77242314 - MER52A LTR ERV1 -1688 67 1 1300 183 8 8 chr17 12262252 12262492 -77242061 - MLT2B1 LTR ERVL -280 240 1 1710 155 28 34 chr17 12262493 12262816 -77241737 + MER89 LTR ERV1 238 558 -1 749 199 39 11 chr17 12262979 12263160 -77241393 - MER5A DNA MER1_type -3 186 1 488 306 12 12 chr17 12263631 12263791 -77240762 - MER5B DNA MER1_type -16 162 3 1046 288 52 57 chr17 12264682 12264802 -77239751 - MLT1K LTR MaLR -17 571 452 2105 112 35 0 chr17 12264802 12265089 -77239464 + AluY SINE Alu 1 297 -14 1046 288 52 57 chr17 12265089 12265510 -77239043 - MLT1K LTR MaLR -136 452 33 1028 234 9 22 chr17 12265623 12265849 -77238704 - MER58A DNA MER1_type -1 223 1 1447 214 148 30 chr17 12266109 12266609 -77237944 + MER89 LTR ERV1 1 559 0 254 171 24 110 chr17 12266670 12266712 -77237841 + MLT1B LTR MaLR 11 44 -346 4082 177 40 25 chr17 12266712 12266840 -77237713 + LTR39 LTR ERV1 3 128 -655 2370 91 0 3 chr17 12266840 12267137 -77237416 + AluY SINE Alu 1 296 -15 4082 177 40 25 chr17 12267137 12267777 -77236776 + LTR39 LTR ERV1 128 783 0 254 171 24 110 chr17 12267777 12267816 -77236737 + MLT1B LTR MaLR 44 85 -305 1460 186 11 11 chr17 12267817 12268097 -77236456 - LTR4 LTR ERV1 0 596 317 1550 183 9 56 chr17 12268379 12268702 -77235851 + MLT1B LTR MaLR 83 390 0 508 221 39 44 chr17 12268885 12269066 -77235487 + MER53 DNA DNA 1 180 -9 452 216 78 9 chr17 12269277 12269393 -77235160 + MLT2E LTR ERVL 505 628 0 2094 124 72 26 chr17 12269448 12269796 -77234757 - THE1B LTR MaLR 0 364 1 2568 158 209 24 chr17 12269888 12270502 -77234051 - LTR8A LTR ERV1 0 727 1 265 236 0 0 chr17 12271703 12271758 -77232795 + HAL1b LINE L1 378 432 -916 1414 149 4 26 chr17 12271768 12271996 -77232557 + AluSx SINE Alu 1 223 -89 4303 117 11 3 chr17 12272286 12272893 -77231660 + LTR9 LTR ERV1 1 612 0 470 280 31 34 chr17 12273118 12273387 -77231166 - L1ME2 LINE L1 -219 5945 5676 2831 191 11 15 chr17 12273935 12274479 -77230074 + MLT1F LTR MaLR 1 542 0 1707 173 14 4 chr17 12275624 12275902 -77228651 + AluJo SINE Alu 7 287 -25 728 169 174 0 chr17 12276017 12276195 -77228358 - MER3 DNA MER1_type 0 209 1 182 351 79 12 chr17 12278447 12278612 -77225941 - L2 LINE L2 -208 3064 2889 498 223 28 2 chr17 12278686 12278824 -77225729 + L1ME1 LINE L1 5689 5832 -334 865 158 0 0 chr17 12278831 12278958 -77225595 - FLAM_C SINE Alu -6 127 1 1757 193 76 36 chr17 12278980 12279430 -77225123 - L1MB1 LINE L1 0 6168 5701 312 211 0 0 chr17 12279499 12279570 -77224983 + GA-rich Low_complexity Low_complexity 4 74 0 5160 267 103 33 chr17 12280531 12282201 -77222352 + L2 LINE L2 297 2254 -1059 2226 111 0 3 chr17 12282201 12282498 -77222055 - AluSg SINE Alu -14 296 1 5160 267 103 33 chr17 12282498 12283638 -77220915 + L2 LINE L2 2254 3313 0 333 0 0 0 chr17 12283654 12283691 -77220862 + (TTG)n Simple_repeat Simple_repeat 2 38 0 1747 140 11 21 chr17 12283693 12283978 -77220575 - AluJo SINE Alu -30 282 1 247 337 59 10 chr17 12284085 12284186 -77220367 - L2 LINE L2 0 3272 3167 2010 84 4 8 chr17 12284615 12284878 -77219675 - AluSc SINE Alu -1 308 47 436 314 157 21 chr17 12284938 12285174 -77219379 - MLT1K LTR MaLR -113 475 208 2357 219 19 27 chr17 12285363 12285734 -77218819 - LTR53 LTR ERVL -3 516 149 2340 106 0 10 chr17 12285734 12286046 -77218507 - AluSx SINE Alu -3 309 1 2357 219 19 27 chr17 12286046 12286194 -77218359 - LTR53 LTR ERVL -370 149 1 350 232 150 72 chr17 12287040 12287247 -77217306 - L1MEd LINE L1 -5838 281 59 525 360 23 13 chr17 12287964 12288264 -77216289 + L3 LINE CR1 1212 1514 -63 213 146 24 0 chr17 12288526 12288567 -77215986 + T-rich Low_complexity Low_complexity 2 43 0 181 289 0 0 chr17 12290156 12290201 -77214352 + MIR SINE MIR 81 125 -83 1948 108 56 14 chr17 12291516 12291802 -77212751 + AluSc SINE Alu 1 298 -11 555 237 23 28 chr17 12291830 12292007 -77212546 - MER113 DNA MER1_type? -337 184 9 1506 178 18 96 chr17 12292734 12293128 -77211425 - MLT1A1 LTR MaLR -2 363 1 563 194 45 65 chr17 12293268 12293423 -77211130 - MER63 DNA MER1_type -58 778 1 2149 122 0 13 chr17 12293479 12293782 -77210771 + AluSx SINE Alu 1 299 -13 323 179 0 51 chr17 12294860 12294938 -77209615 - L1PA10 LINE L1 -2 6166 6093 515 88 0 2 chr17 12294938 12295010 -77209543 + L1PA6 LINE L1 5917 5980 -174 290 305 105 37 chr17 12295060 12295250 -77209303 - MIR SINE MIR -7 255 53 310 216 22 147 chr17 12296100 12296331 -77208222 + MIR SINE MIR 2 203 -59 2594 57 0 0 chr17 12296482 12296778 -77207775 + AluSc SINE Alu 1 296 -13 262 279 103 67 chr17 12296916 12297081 -77207472 - MIR SINE MIR -57 205 35 467 213 40 47 chr17 12297114 12297264 -77207289 - MLT1K LTR MaLR -2 586 438 255 261 115 48 chr17 12297438 12297603 -77206950 - MLT1K LTR MaLR -291 297 122 1730 149 10 36 chr17 12298102 12298403 -77206150 + AluJb SINE Alu 1 293 -19 2241 113 3 7 chr17 12298407 12298709 -77205844 + AluSg SINE Alu 1 301 -9 2384 90 0 0 chr17 12299304 12299605 -77204948 + AluSg SINE Alu 1 301 -9 647 88 0 0 chr17 12299521 12299612 -77204941 + Alu SINE Alu 220 310 -2 215 246 33 0 chr17 12299764 12299825 -77204728 - L2 LINE L2 -9 3304 3242 2387 73 3 20 chr17 12299976 12300277 -77204276 + AluSg SINE Alu 1 296 -14 2418 106 0 0 chr17 12301139 12301450 -77203103 - AluSp SINE Alu -2 311 1 232 254 69 95 chr17 12302377 12302403 -77202150 - MIR SINE MIR -78 184 159 2262 112 0 0 chr17 12302403 12302708 -77201845 + AluSx SINE Alu 1 305 -7 232 254 69 95 chr17 12302708 12302870 -77201683 - MIR SINE MIR -103 159 1 233 143 0 20 chr17 12302890 12302939 -77201614 + (TTCC)n Simple_repeat Simple_repeat 1 48 0 189 0 0 0 chr17 12303253 12303274 -77201279 + (CA)n Simple_repeat Simple_repeat 1 21 0 421 254 12 103 chr17 12304148 12304313 -77200240 - MIR SINE MIR -108 154 5 334 320 143 28 chr17 12304599 12304728 -77199825 - L3 LINE CR1 -52 1525 1412 303 200 40 0 chr17 12304728 12304803 -77199750 - MER116 DNA Mariner 0 80 3 334 320 143 28 chr17 12304803 12305029 -77199524 - L3 LINE CR1 -165 1412 1129 213 266 191 62 chr17 12305064 12305305 -77199248 - L2 LINE L2 0 3313 3042 240 313 73 13 chr17 12306570 12306720 -77197833 - MIR SINE MIR -27 235 77 2400 31 14 0 chr17 12307278 12307564 -77196989 - L1PA4 LINE L1 0 6155 5866 1374 151 17 0 chr17 12308090 12308329 -77196224 + L1MA9 LINE L1 5867 6109 -203 2267 79 0 0 chr17 12308329 12308627 -77195926 + AluSc SINE Alu 1 298 0 2018 65 0 15 chr17 12308646 12308908 -77195645 + L1PA8 LINE L1 5915 6172 0 1405 98 0 45 chr17 12308909 12309133 -77195420 + L1MA9 LINE L1 6099 6312 0 1581 104 19 5 chr17 12309619 12309831 -77194722 + AluSg/x SINE Alu 80 294 -16 449 143 66 0 chr17 12310143 12310234 -77194319 - MER53 DNA DNA -91 98 2 459 274 162 19 chr17 12311409 12311675 -77192878 + L3 LINE CR1 1215 1518 -59 324 266 31 47 chr17 12313252 12313335 -77191218 - MER58C DNA MER1_type -2220 200 118 1937 137 3 47 chr17 12313335 12313657 -77190896 - AluSx SINE Alu -4 308 1 324 266 31 47 chr17 12313657 12313701 -77190852 - MER58C DNA MER1_type -2302 118 75 2210 85 7 27 chr17 12314157 12314480 -77190073 - AluSg1 SINE Alu 0 317 1 195 156 0 0 chr17 12315471 12315503 -77189050 - MIR SINE MIR -11 251 220 943 176 6 0 chr17 12315628 12315793 -77188760 + FRAM SINE Alu 1 166 0 241 208 0 19 chr17 12315823 12315876 -77188677 + L2 LINE L2 3259 3310 -3 1892 204 86 91 chr17 12316508 12316568 -77187985 - MLT1E2 LTR MaLR -23 601 542 2116 123 0 7 chr17 12316568 12316861 -77187692 - AluSg SINE Alu -19 291 1 1892 204 86 91 chr17 12316861 12317403 -77187150 - MLT1E2 LTR MaLR -82 542 3 236 293 13 0 chr17 12317506 12317581 -77186972 - Charlie8 DNA MER1_type -2226 191 116 288 289 8 66 chr17 12317716 12317837 -77186716 - MIR SINE MIR -60 202 89 304 148 30 178 chr17 12317838 12317904 -77186649 + MER5B DNA MER1_type 2 40 -138 1867 137 30 4 chr17 12317904 12318175 -77186378 + AluSq SINE Alu 1 278 -35 304 148 30 178 chr17 12318175 12318243 -77186310 + MER5B DNA MER1_type 40 116 -62 328 286 41 20 chr17 12318953 12319100 -77185453 + MER5A DNA MER1_type 36 185 -4 295 298 8 41 chr17 12319651 12319772 -77184781 - MIR SINE MIR -62 146 30 764 255 150 31 chr17 12319932 12320284 -77184269 - LTR16A LTR ERVL 0 450 59 2259 72 3 46 chr17 12320433 12320738 -77183815 + AluSq SINE Alu 1 292 -21 22 0 0 0 chr17 12321600 12321622 -77182931 + AT_rich Low_complexity Low_complexity 1 22 0 654 190 190 0 chr17 12321677 12321814 -77182739 - MER7C DNA MER2_type 0 612 450 2265 189 39 11 chr17 12321962 12322423 -77182130 - MER7C DNA MER2_type -128 474 1 264 352 28 14 chr17 12323515 12323660 -77180893 + L2 LINE L2 2521 2667 -647 2520 84 0 0 chr17 12324044 12324355 -77180198 - AluY SINE Alu 0 311 1 926 81 0 0 chr17 12324362 12324473 -77180080 - AluSp SINE Alu -180 133 23 2313 100 3 0 chr17 12324808 12325107 -77179446 + AluSp SINE Alu 1 300 -13 956 92 0 0 chr17 12325454 12325574 -77178979 - AluSp/q SINE Alu -18 295 176 189 343 30 40 chr17 12325802 12325901 -77178652 - L2 LINE L2 -31 3241 3144 840 182 144 0 chr17 12325990 12326177 -77178376 + MER20 DNA MER1_type 2 215 -4 2371 99 0 3 chr17 12327020 12327322 -77177231 + AluSp SINE Alu 1 301 -12 608 301 69 19 chr17 12327436 12327496 -77177057 - L1ME LINE L1 -343 5778 5722 509 194 125 19 chr17 12327496 12327656 -77176897 + MER104 DNA MER2_type 4 180 0 608 301 69 19 chr17 12327656 12328048 -77176505 - L1ME LINE L1 -399 5722 5282 259 264 83 42 chr17 12329962 12330106 -77174447 - L2 LINE L2 -87 3226 3077 2695 46 0 0 chr17 12330457 12330761 -77173792 - AluY SINE Alu -7 304 1 195 204 0 0 chr17 12332067 12332111 -77172442 + (TCCA)n Simple_repeat Simple_repeat 3 46 0 2811 13 0 3 chr17 12332250 12332555 -77171998 + AluY SINE Alu 1 304 -7 195 136 51 0 chr17 12332562 12332621 -77171932 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 478 272 97 67 chr17 12332855 12333050 -77171503 - MIR SINE MIR 0 262 62 2157 59 4 0 chr17 12333256 12333528 -77171025 - L1PB1 LINE L1 -86 6065 5793 306 0 0 0 chr17 12333528 12333562 -77170991 + (TG)n Simple_repeat Simple_repeat 2 35 0 213 255 20 0 chr17 12333778 12333829 -77170724 + (CATATA)n Simple_repeat Simple_repeat 1 52 0 1796 63 0 0 chr17 12333830 12334051 -77170502 + L1PB1 LINE L1 5783 6003 -148 267 189 0 0 chr17 12334051 12334104 -77170449 + (CATATA)n Simple_repeat Simple_repeat 3 55 0 3705 82 4 4 chr17 12334104 12334613 -77169940 - L1PB1 LINE L1 -361 5790 5282 4658 260 64 20 chr17 12334763 12337472 -77167081 - L1ME2 LINE L1 0 6233 3406 3301 103 50 95 chr17 12337478 12338099 -77166454 + LTR14B LTR ERVK 16 608 0 3119 252 55 55 chr17 12338106 12338492 -77166061 - L1ME2 LINE L1 -2820 3395 3010 1963 176 0 0 chr17 12338492 12338799 -77165754 - AluSx SINE Alu -5 307 1 3119 252 55 55 chr17 12338799 12340592 -77163961 - L1ME2 LINE L1 -3205 3010 1256 340 246 50 68 chr17 12340704 12340924 -77163629 - L1ME2 LINE L1 -5504 892 677 2870 13 0 0 chr17 12340924 12341231 -77163322 - AluYa5 SINE Alu -4 307 1 239 342 46 46 chr17 12341486 12341682 -77162871 - L1ME2 LINE L1 -6061 335 140 291 28 0 0 chr17 12342449 12342485 -77162068 + (GA)n Simple_repeat Simple_repeat 1 36 0 229 191 24 0 chr17 12344929 12344971 -77159582 + MLT1J2 LTR MaLR 254 296 -154 416 251 67 130 chr17 12345823 12346138 -77158415 - MLT1J2 LTR MaLR -154 296 2 2293 116 0 0 chr17 12346561 12346863 -77157690 + AluSg SINE Alu 1 302 -8 2220 115 3 0 chr17 12348883 12349179 -77155374 - AluSp SINE Alu -16 297 1 2235 196 34 69 chr17 12349383 12349935 -77154618 - MER74A LTR ERVL 0 558 26 219 265 20 82 chr17 12350061 12350159 -77154394 + MIR3 SINE MIR 111 202 -6 24 32 0 0 chr17 12350217 12350248 -77154305 + AT_rich Low_complexity Low_complexity 1 31 0 2243 293 174 30 chr17 12350298 12351818 -77152735 + L2 LINE L2 95 1833 -1481 253 157 0 57 chr17 12352019 12352089 -77152464 + (TATATG)n Simple_repeat Simple_repeat 3 68 0 1151 273 88 47 chr17 12352119 12353005 -77151548 - L1ME3 LINE L1 -230 5915 4994 4565 281 87 20 chr17 12353043 12354449 -77150104 - L1ME3 LINE L1 -1381 4748 3438 2434 87 3 3 chr17 12354449 12354759 -77149794 - AluSp SINE Alu -3 310 1 4565 281 87 20 chr17 12354759 12355944 -77148609 - L1ME3 LINE L1 -2691 3438 2022 1853 110 0 8 chr17 12356212 12356493 -77148060 - AluSg SINE Alu 0 318 40 612 266 78 56 chr17 12356555 12357293 -77147260 - L1ME3 LINE L1 -4677 1633 816 349 228 61 26 chr17 12357643 12357757 -77146796 - L1MC4a LINE L1 -211 7597 7480 711 297 22 5 chr17 12359991 12360213 -77144340 + MIR SINE MIR 11 236 -26 280 71 0 24 chr17 12360255 12360297 -77144256 - MER5B DNA MER1_type -120 58 18 833 183 0 7 chr17 12360440 12360577 -77143976 - FRAM SINE Alu -25 151 16 284 243 122 0 chr17 12360650 12360724 -77143829 - L2 LINE L2 -2 3270 3188 726 203 25 19 chr17 12360821 12360979 -77143574 + MER5B DNA MER1_type 18 176 -2 522 295 123 4 chr17 12361049 12361276 -77143277 - MARNA DNA Mariner -89 497 244 2151 108 0 0 chr17 12361344 12361648 -77142905 - AluSg SINE Alu 0 304 1 229 353 101 40 chr17 12363596 12363944 -77140609 - L2 LINE L2 -562 2752 2384 2340 86 0 0 chr17 12363978 12364269 -77140284 - AluY SINE Alu -9 302 12 213 214 0 0 chr17 12365709 12365751 -77138802 + (CA)n Simple_repeat Simple_repeat 2 43 0 1618 129 4 4 chr17 12366030 12366263 -77138290 + AluSc SINE Alu 1 233 -76 543 246 106 0 chr17 12366773 12366915 -77137638 - MER5B DNA MER1_type -21 157 1 2358 95 3 0 chr17 12366992 12367298 -77137255 + AluSg SINE Alu 1 307 -3 2445 81 3 0 chr17 12369970 12370277 -77134276 - AluSg SINE Alu -2 308 1 557 252 23 2 chr17 12370303 12370462 -77134091 + MIR SINE MIR 3 169 -63 1660 171 67 131 chr17 12370756 12371098 -77133455 + Charlie1b DNA MER1_type 13 375 -2386 2105 93 0 31 chr17 12371098 12371389 -77133164 - AluSg SINE Alu -28 282 1 1660 171 67 131 chr17 12371389 12371414 -77133139 + Charlie1b DNA MER1_type 375 400 -2361 2086 109 0 44 chr17 12371414 12371735 -77132818 - AluSx SINE Alu -5 307 1 1660 171 67 131 chr17 12371735 12371887 -77132666 + Charlie1b DNA MER1_type 400 500 -23 492 194 0 0 chr17 12372778 12372907 -77131646 + CT-rich Low_complexity Low_complexity 1 129 0 1903 111 11 11 chr17 12372907 12373364 -77131189 - AluSg SINE Alu 0 457 1 250 295 101 36 chr17 12373651 12373790 -77130763 + MIR SINE MIR 50 197 -65 970 204 44 0 chr17 12373820 12374001 -77130552 - MER5A DNA MER1_type 0 189 1 2126 238 108 35 chr17 12374022 12374747 -77129806 - L1MC4a LINE L1 -1505 6303 5520 1685 146 56 8 chr17 12375055 12375323 -77129230 - AluJo SINE Alu -21 291 11 396 324 123 72 chr17 12375331 12375967 -77128586 - HAL1b LINE L1 -676 672 5 39 80 0 0 chr17 12376160 12376248 -77128305 + AT_rich Low_complexity Low_complexity 1 88 0 300 106 25 62 chr17 12376297 12376458 -77128095 + (TATAA)n Simple_repeat Simple_repeat 5 159 0 237 128 81 12 chr17 12376496 12376582 -77127971 + (TA)n Simple_repeat Simple_repeat 2 93 0 2423 87 0 0 chr17 12377145 12377445 -77127108 + AluSg SINE Alu 1 300 -10 349 335 57 78 chr17 12379695 12379845 -77124708 - L2 LINE L2 -25 3247 3095 2165 115 0 10 chr17 12379845 12380158 -77124395 - AluSx SINE Alu -2 310 1 349 335 57 78 chr17 12380158 12380377 -77124176 - L2 LINE L2 -177 3095 2886 385 311 107 43 chr17 12380593 12380987 -77123566 - L2 LINE L2 -1076 2238 1806 2551 61 7 3 chr17 12380987 12381297 -77123256 + AluY SINE Alu 1 311 0 385 311 107 43 chr17 12381297 12381390 -77123163 - L2 LINE L2 -1508 1806 1720 2249 73 4 0 chr17 12382759 12383032 -77121521 - AluSp SINE Alu -12 301 28 336 311 91 15 chr17 12383607 12383739 -77120814 + MIR SINE MIR 47 188 -74 1789 139 43 7 chr17 12383748 12384050 -77120503 + L1MA4A LINE L1 5985 6297 -6 232 340 110 10 chr17 12384530 12384630 -77119923 - L2 LINE L2 -41 3231 3122 187 286 0 0 chr17 12384776 12384832 -77119721 - L2 LINE L2 -222 3050 2995 475 311 144 32 chr17 12385922 12386136 -77118417 + L2 LINE L2 2859 3048 -265 504 0 0 0 chr17 12386136 12386192 -77118361 + (CA)n Simple_repeat Simple_repeat 1 56 0 378 0 0 0 chr17 12386191 12386233 -77118320 + (GA)n Simple_repeat Simple_repeat 2 43 0 * 475 311 144 32 chr17 12386192 12386427 -77118126 + L2 LINE L2 3048 3313 0 396 333 68 0 chr17 12386983 12387115 -77117438 + L2 LINE L2 3129 3269 -3 730 259 60 14 chr17 12388296 12388578 -77115975 - L1ME4a LINE L1 -198 5923 5629 387 337 84 15 chr17 12388627 12388888 -77115665 - L1ME4a LINE L1 -811 5548 5270 634 309 140 38 chr17 12389011 12389481 -77115072 - MLT1K LTR MaLR -4 584 67 987 113 0 0 chr17 12390041 12390301 -77114252 + (TA)n Simple_repeat Simple_repeat 1 260 0 85 11 0 0 chr17 12390301 12390393 -77114160 + AT_rich Low_complexity Low_complexity 1 92 0 2603 199 51 57 chr17 12390398 12391084 -77113469 - L1MB7 LINE L1 -317 5867 5189 5045 89 5 0 chr17 12391084 12391735 -77112818 - L1PA14 LINE L1 -9 6152 5499 2603 199 51 57 chr17 12391735 12391849 -77112704 - L1MB7 LINE L1 -995 5189 5076 430 330 35 20 chr17 12392067 12392270 -77112283 + L3 LINE CR1 1024 1229 -348 525 335 91 4 chr17 12392352 12392685 -77111868 - L3 LINE CR1 -634 943 534 2112 184 133 7 chr17 12392685 12393254 -77111299 + MLT1E2 LTR MaLR 1 626 0 197 317 190 7 chr17 12393254 12393396 -77111157 - L3 LINE CR1 -1039 538 371 493 291 58 73 chr17 12393497 12393758 -77110795 + L3 LINE CR1 1313 1569 -8 270 302 42 10 chr17 12393941 12394037 -77110516 - MIR SINE MIR -140 122 24 2294 107 10 0 chr17 12394248 12394557 -77109996 - AluSx SINE Alu 0 312 1 281 216 13 90 chr17 12394636 12394725 -77109828 + MIR3 SINE MIR 102 195 -13 887 132 0 83 chr17 12395428 12395572 -77108981 + FLAM_C SINE Alu 2 133 0 2112 195 50 82 chr17 12395813 12396062 -77108491 - L1ME1 LINE L1 -7 6159 5904 1640 192 0 10 chr17 12396062 12396353 -77108200 - AluJb SINE Alu -24 288 1 2112 195 50 82 chr17 12396353 12396698 -77107855 - L1ME1 LINE L1 -262 5904 5584 337 340 70 91 chr17 12396815 12397286 -77107267 - L2 LINE L2 0 3272 2812 232 367 61 0 chr17 12397904 12398002 -77106551 + MIR3 SINE MIR 71 174 -34 1488 62 0 0 chr17 12398425 12398602 -77105951 - L1PA5 LINE L1 0 6154 5978 485 238 14 28 chr17 12399159 12399302 -77105251 - MARNA DNA Mariner -437 149 9 290 73 0 36 chr17 12399436 12399491 -77105062 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 231 36 0 0 chr17 12399787 12399815 -77104738 + (GA)n Simple_repeat Simple_repeat 1 28 0 204 162 40 54 chr17 12399824 12399898 -77104655 + (TAGA)n Simple_repeat Simple_repeat 3 75 0 181 312 50 35 chr17 12401102 12401243 -77103310 + L2 LINE L2 1955 2097 -1217 2450 65 0 19 chr17 12401842 12402149 -77102404 - AluY SINE Alu -10 301 1 3377 104 22 85 chr17 12402174 12402800 -77101753 - L1MA4 LINE L1 -3 6297 5711 3504 133 21 6 chr17 12402882 12403401 -77101152 - MER1A DNA MER1_type 0 527 1 559 243 181 25 chr17 12403437 12403680 -77100873 + L2 LINE L2 3028 3308 -5 2263 117 0 0 chr17 12403765 12404063 -77100490 + AluSx SINE Alu 5 302 -10 320 270 54 9 chr17 12404516 12404627 -77099926 + MER103 DNA DNA 44 159 -7 2479 93 0 3 chr17 12404943 12405254 -77099299 + AluSg SINE Alu 1 310 0 191 30 0 61 chr17 12405497 12405530 -77099023 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 209 308 77 56 chr17 12406906 12407101 -77097452 - MIR SINE MIR -14 248 50 648 243 0 14 chr17 12408423 12408563 -77095990 - MER63 DNA MER1_type -298 764 1 402 250 0 0 chr17 12408563 12408645 -77095908 - Charlie8 DNA MER1_type -2230 187 106 532 206 119 46 chr17 12408708 12408902 -77095651 + MIR SINE MIR 45 252 -10 918 188 0 0 chr17 12408906 12409268 -77095285 + (ATG)n Simple_repeat Simple_repeat 1 362 0 483 259 0 0 chr17 12409299 12409465 -77095088 + (ATG)n Simple_repeat Simple_repeat 2 167 0 5222 26 5 3 chr17 12409575 12410186 -77094367 - L1PA4 LINE L1 0 6155 5544 2359 73 0 32 chr17 12411746 12412062 -77092491 + AluY SINE Alu 1 306 -5 499 131 0 0 chr17 12412316 12412400 -77092153 + MER5A DNA MER1_type 26 109 -80 580 282 0 12 chr17 12412471 12412641 -77091912 - MER5B DNA MER1_type -7 171 4 593 230 8 16 chr17 12413114 12413240 -77091313 - MER5A DNA MER1_type 0 189 65 1051 186 14 41 chr17 12413343 12413563 -77090990 - MER20 DNA MER1_type 0 219 6 245 27 54 0 chr17 12413586 12413623 -77090930 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2117 93 0 0 chr17 12413625 12413895 -77090658 - AluY SINE Alu -25 286 17 319 309 0 11 chr17 12414079 12414173 -77090380 + MIR SINE MIR 13 105 -157 538 172 31 31 chr17 12414185 12414313 -77090240 - L1MD3 LINE L1 -10 7985 7858 454 303 14 0 chr17 12414321 12414466 -77090087 + MIR SINE MIR 116 262 0 601 294 44 24 chr17 12416205 12416457 -77088096 + MIR SINE MIR 6 262 0 2174 138 0 0 chr17 12416558 12416856 -77087697 - AluSx SINE Alu -13 299 2 1093 297 17 26 chr17 12417488 12417906 -77086647 - L1ME4a LINE L1 -251 5870 5457 1208 187 190 13 chr17 12418459 12418769 -77085784 - MLT1A1 LTR MaLR 0 365 1 273 180 37 149 chr17 12418838 12418999 -77085554 - MIR SINE MIR -72 190 48 349 186 186 29 chr17 12419102 12419242 -77085311 - L1ME4a LINE L1 -196 5925 5764 527 127 13 0 chr17 12419557 12419636 -77084917 - MADE1 DNA Mariner 0 80 1 310 111 0 0 chr17 12419764 12419809 -77084744 - MADE1 DNA Mariner -35 45 1 187 333 8 68 chr17 12420040 12420157 -77084396 + MIR SINE MIR 38 147 -61 711 364 30 21 chr17 12421175 12421650 -77082903 + L2 LINE L2 2228 2706 -608 207 359 59 12 chr17 12421771 12421941 -77082612 + L2 LINE L2 2869 3046 -226 2327 92 0 0 chr17 12422010 12422304 -77082249 - AluSg SINE Alu -16 294 1 254 269 71 91 chr17 12423709 12424017 -77080536 + HAL1 LINE L1 845 1146 -1361 832 164 31 13 chr17 12424346 12424505 -77080048 - THE1C LTR MaLR -34 341 180 1080 82 94 13 chr17 12424691 12424850 -77079703 - THE1C LTR MaLR -203 172 1 536 270 147 5 chr17 12424891 12425102 -77079451 + HAL1 LINE L1 1501 1741 -766 378 275 9 18 chr17 12425133 12425242 -77079311 + HAL1 LINE L1 1814 1921 -586 233 354 120 6 chr17 12425394 12425552 -77079001 + L2 LINE L2 3097 3272 0 2093 111 0 74 chr17 12426199 12426523 -77078030 + AluSg SINE Alu 1 300 -10 2441 84 0 0 chr17 12427251 12427550 -77077003 - AluY SINE Alu -2 309 11 441 329 52 41 chr17 12427783 12428245 -77076308 - L1M4 LINE L1 -1127 5019 4553 804 174 0 8 chr17 12428327 12428459 -77076094 + FLAM_C SINE Alu 1 131 -2 377 308 118 21 chr17 12428621 12429364 -77075189 + L1M4 LINE L1 2649 3463 -2683 957 283 86 52 chr17 12429489 12430376 -77074177 + L1M4 LINE L1 3689 4605 -1541 1494 97 0 10 chr17 12430644 12430840 -77073713 + AluSc SINE Alu 84 277 -32 221 56 0 28 chr17 12430840 12430876 -77073677 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 2102 78 4 8 chr17 12431581 12431849 -77072704 + AluSq SINE Alu 23 289 -24 6058 106 11 1 chr17 12431988 12433712 -77070841 - L1PA14 LINE L1 -2 6159 4439 258 32 0 0 chr17 12433856 12433887 -77070666 + (CA)n Simple_repeat Simple_repeat 2 32 0 2134 131 33 46 chr17 12433968 12434176 -77070377 - THE1B LTR MaLR 0 364 162 2160 105 24 3 chr17 12434176 12434470 -77070083 + AluY SINE Alu 1 300 -11 2134 131 33 46 chr17 12434470 12434628 -77069925 - THE1B LTR MaLR -202 162 3 1055 157 6 0 chr17 12435234 12435412 -77069141 + L1MB1 LINE L1 5941 6119 -70 326 175 0 0 chr17 12435420 12435477 -77069076 + AluS SINE Alu 1 57 -246 2994 139 4 44 chr17 12437306 12437694 -77066859 - L1PB4 LINE L1 -3 6153 5790 2219 121 0 13 chr17 12437694 12437866 -77066687 - AluSx SINE Alu -7 305 137 2307 81 3 7 chr17 12437866 12438162 -77066391 - AluSc SINE Alu -14 295 1 2219 121 0 13 chr17 12438162 12438295 -77066258 - AluSx SINE Alu -175 137 4 2994 139 4 44 chr17 12438295 12438430 -77066123 - L1PB4 LINE L1 -366 5790 5651 2482 72 0 3 chr17 12438689 12438993 -77065560 - AluSc SINE Alu -5 304 2 2393 63 0 0 chr17 12440947 12441231 -77063322 - AluY SINE Alu -3 308 25 1499 173 49 20 chr17 12442542 12442888 -77061665 - L1MB1 LINE L1 -22 6167 5812 869 168 8 107 chr17 12442891 12443135 -77061418 + L1MA10 LINE L1 6115 6334 0 477 279 25 6 chr17 12443175 12443333 -77061220 + MIR SINE MIR 43 203 -59 209 281 0 18 chr17 12444551 12444608 -77059945 + MIR SINE MIR 17 72 -136 2320 83 0 22 chr17 12444859 12445171 -77059382 + AluSg1 SINE Alu 1 305 -4 323 276 78 0 chr17 12446038 12446154 -77058399 - MIR3 SINE MIR -3 205 81 368 243 87 27 chr17 12447844 12447983 -77056570 - MIR3 SINE MIR -27 181 34 2634 176 80 20 chr17 12448815 12449303 -77055250 + MER63 DNA MER1_type 430 958 -103 2255 106 0 7 chr17 12449303 12449605 -77054948 - AluSq SINE Alu -13 300 1 2634 176 80 20 chr17 12449605 12449677 -77054876 + MER63 DNA MER1_type 958 1024 -37 762 299 23 23 chr17 12449987 12450248 -77054305 - MIR SINE MIR 0 262 2 47 78 0 0 chr17 12450349 12450452 -77054101 + AT_rich Low_complexity Low_complexity 1 103 0 22 0 0 0 chr17 12450483 12450505 -77054048 + AT_rich Low_complexity Low_complexity 1 22 0 898 137 0 0 chr17 12450639 12450770 -77053783 - AluSg/x SINE Alu -12 300 170 435 237 45 42 chr17 12451534 12451713 -77052840 + L1MC4a LINE L1 5784 5963 -158 26 0 0 0 chr17 12451714 12451740 -77052813 + AT_rich Low_complexity Low_complexity 1 26 0 2182 100 0 23 chr17 12452028 12452327 -77052226 + AluSx SINE Alu 5 296 -16 2667 104 28 0 chr17 12452527 12452881 -77051672 - THE1B LTR MaLR 0 364 1 307 273 45 0 chr17 12452909 12452997 -77051556 - L1ME LINE L1 -333 5837 5746 625 233 25 12 chr17 12453020 12453037 -77051516 - L1MA10 LINE L1 -1 6333 6317 1323 204 35 46 chr17 12453037 12453404 -77051149 - L1ME1 LINE L1 -7 6159 5797 217 361 0 0 chr17 12453404 12453476 -77051077 + MIR SINE MIR 191 262 0 2510 43 40 0 chr17 12453769 12454068 -77050485 - AluY SINE Alu 0 311 1 257 335 60 22 chr17 12454473 12454658 -77049895 - MLT1J LTR MaLR -193 318 127 226 329 12 24 chr17 12454716 12454801 -77049752 - MIR SINE MIR -62 146 63 22 0 0 0 chr17 12455592 12455614 -77048939 + AT_rich Low_complexity Low_complexity 1 22 0 424 322 69 23 chr17 12456110 12456371 -77048182 - L2 LINE L2 -123 3190 2918 1066 87 0 27 chr17 12456386 12456536 -77048017 + AluSg/x SINE Alu 167 312 0 588 303 128 16 chr17 12456546 12456866 -77047687 - L2 LINE L2 -410 2904 2549 2255 114 3 0 chr17 12456901 12457200 -77047353 + AluSp SINE Alu 1 300 -13 21 0 0 0 chr17 12458001 12458022 -77046531 + AT_rich Low_complexity Low_complexity 1 21 0 454 227 92 35 chr17 12458832 12458973 -77045580 + MIR SINE MIR 97 245 -17 2425 92 0 0 chr17 12459729 12460035 -77044518 + AluSg SINE Alu 2 307 -3 498 325 257 18 chr17 12460350 12460791 -77043762 + L2 LINE L2 1133 1468 -1846 2178 124 3 7 chr17 12460791 12461097 -77043456 + AluSx SINE Alu 1 305 -7 498 325 257 18 chr17 12461097 12461270 -77043283 + L2 LINE L2 1468 1598 -1716 1603 59 5 30 chr17 12461270 12461472 -77043081 - MER107 DNA MER1_type 0 197 1 498 325 257 18 chr17 12461472 12461690 -77042863 + L2 LINE L2 1598 2165 -1149 483 333 51 5 chr17 12462083 12462278 -77042275 - MIR3 SINE MIR -3 205 2 263 348 50 35 chr17 12463869 12464010 -77040543 - MIR3 SINE MIR -63 145 3 208 356 76 8 chr17 12464205 12464323 -77040230 - MIR SINE MIR -75 187 62 268 157 214 0 chr17 12464416 12464486 -77040067 - MIR SINE MIR -73 189 105 253 299 103 0 chr17 12464537 12464634 -77039919 - L2 LINE L2 -408 2906 2800 526 219 120 49 chr17 12464659 12464842 -77039711 - MIR SINE MIR 0 262 67 2575 157 2 15 chr17 12465220 12465628 -77038925 - MER57A LTR ERV1 0 403 1 2578 97 14 8 chr17 12465825 12466176 -77038377 + THE1A LTR MaLR 3 355 0 688 248 75 75 chr17 12466516 12466823 -77037730 - L1ME3A LINE L1 -4 6235 5929 4293 255 79 37 chr17 12466865 12468973 -77035580 - L1MEc LINE L1 -1945 4270 2111 536 277 83 25 chr17 12469170 12469448 -77035105 - L1MEc LINE L1 -4561 1835 1542 1890 151 3 7 chr17 12469609 12469894 -77034659 + AluSx SINE Alu 4 287 -25 2198 95 28 0 chr17 12470176 12470461 -77034092 + AluSp SINE Alu 1 293 -20 299 299 95 14 chr17 12471023 12471170 -77033383 + MIR SINE MIR 69 227 -35 362 306 89 17 chr17 12471247 12471427 -77033126 - MIR SINE MIR 0 262 70 194 294 24 47 chr17 12471427 12471512 -77033041 - MIR SINE MIR -109 99 17 266 317 40 10 chr17 12472022 12472123 -77032430 - L3 LINE CR1 -5 1572 1469 2389 62 0 55 chr17 12472213 12472538 -77032015 - AluY SINE Alu -4 307 1 487 274 104 52 chr17 12472636 12472906 -77031647 - L3 LINE CR1 -298 1279 996 1790 40 0 0 chr17 12473056 12473257 -77031296 + L1PA5 LINE L1 5948 6148 -6 203 380 37 0 chr17 12473421 12473529 -77031024 - L3 LINE CR1 -578 999 888 2219 105 3 7 chr17 12476328 12476634 -77027919 + AluSg SINE Alu 1 305 -5 201 39 0 0 chr17 12476634 12476660 -77027893 + (GA)n Simple_repeat Simple_repeat 2 27 0 1404 279 99 122 chr17 12476717 12477531 -77027022 + L2 LINE L2 124 955 -2359 207 0 0 0 chr17 12477531 12477554 -77026999 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 802 91 0 0 chr17 12477556 12477655 -77026898 - AluSg/x SINE Alu -25 287 189 1404 279 99 122 chr17 12477655 12477760 -77026793 + L2 LINE L2 956 1062 -2252 2080 120 10 3 chr17 12477760 12478061 -77026492 - AluSx SINE Alu -9 303 1 1404 279 99 122 chr17 12478061 12478914 -77025639 + L2 LINE L2 1062 1955 -1359 221 239 0 0 chr17 12479010 12479056 -77025497 + L2 LINE L2 3207 3252 -20 249 315 63 16 chr17 12479062 12479189 -77025364 - L2 LINE L2 -160 3153 3021 748 241 74 19 chr17 12479217 12479433 -77025120 - MIR SINE MIR -29 233 6 377 277 71 18 chr17 12479453 12479565 -77024988 + L2 LINE L2 3137 3254 -18 2327 80 7 10 chr17 12479585 12479885 -77024668 + AluSq SINE Alu 2 300 -13 621 304 63 33 chr17 12479959 12480294 -77024259 - MARNA DNA Mariner -217 369 25 2203 115 0 13 chr17 12480526 12480839 -77023714 + AluSq SINE Alu 5 313 0 457 314 83 0 chr17 12481075 12481231 -77023322 + MIR SINE MIR 9 177 -85 189 0 0 0 chr17 12481556 12481577 -77022976 + (TG)n Simple_repeat Simple_repeat 1 21 0 268 269 103 21 chr17 12482627 12482772 -77021781 + L1ME4a LINE L1 5318 5474 -647 2258 78 14 0 chr17 12482773 12483066 -77021487 + AluY SINE Alu 1 297 -14 980 151 0 42 chr17 12483077 12483243 -77021310 + AluSg/x SINE Alu 135 293 -17 2063 124 6 22 chr17 12483712 12484027 -77020526 - AluSx SINE Alu 0 312 3 826 113 0 0 chr17 12484093 12484208 -77020345 - AluJb SINE Alu -197 115 1 563 251 60 95 chr17 12484448 12484818 -77019735 + L1ME4a LINE L1 5595 5951 -170 818 171 53 18 chr17 12486896 12487066 -77017487 - MER5B DNA MER1_type -2 176 1 2253 104 0 7 chr17 12487460 12487769 -77016784 + AluY SINE Alu 1 307 -4 2234 96 0 10 chr17 12489222 12489513 -77015040 + AluSx SINE Alu 16 303 -9 1190 102 0 0 chr17 12490039 12490196 -77014357 + AluSg/x SINE Alu 154 310 0 303 140 0 0 chr17 12490203 12490253 -77014300 + (TA)n Simple_repeat Simple_repeat 2 51 0 231 203 0 51 chr17 12492705 12492764 -77011789 - L2 LINE L2 0 3272 3217 1772 190 0 0 chr17 12493683 12493993 -77010560 + AluJb SINE Alu 1 310 -2 1558 68 16 0 chr17 12495051 12495243 -77009310 + AluY SINE Alu 98 292 -19 1085 208 28 0 chr17 12495617 12495833 -77008720 - MER58B DNA MER1_type -3 338 117 2408 97 0 0 chr17 12496325 12496633 -77007920 + AluSc SINE Alu 1 308 -1 303 28 0 0 chr17 12497054 12497090 -77007463 + (TTA)n Simple_repeat Simple_repeat 2 37 0 1217 112 0 6 chr17 12497602 12497763 -77006790 - AluSc SINE Alu -20 289 130 465 86 0 0 chr17 12497763 12497821 -77006732 - AluSg SINE Alu -217 93 36 259 289 72 30 chr17 12497849 12498015 -77006538 + L1M4 LINE L1 4640 4812 -1334 455 309 143 21 chr17 12498019 12498537 -77006016 - L1M4 LINE L1 -1891 4255 3675 335 281 79 9 chr17 12498533 12498647 -77005906 - L1MC/D LINE L1 -2303 5505 5384 * 495 259 16 32 chr17 12498672 12498861 -77005692 - L1MC/D LINE L1 -2361 5447 5262 2371 94 0 13 chr17 12499176 12499484 -77005069 + AluSq SINE Alu 1 304 -9 2353 97 0 3 chr17 12501826 12502135 -77002418 + AluSc SINE Alu 1 308 -1 453 145 0 0 chr17 12503042 12503118 -77001435 + (TTCTCC)n Simple_repeat Simple_repeat 4 79 0 343 304 102 31 chr17 12503844 12504248 -77000305 - MER41B LTR ERV1 -62 450 148 217 346 20 10 chr17 12504481 12504582 -76999971 + L2 LINE L2 2397 2498 -816 2505 57 6 19 chr17 12504623 12504938 -76999615 - AluY SINE Alu 0 311 1 2369 110 0 0 chr17 12504993 12505301 -76999252 - AluSx SINE Alu -4 308 1 2214 205 22 5 chr17 12505411 12505826 -76998727 - MSTA LTR MaLR -6 422 1 938 227 21 65 chr17 12505832 12505861 -76998692 + L2 LINE L2 2439 2468 -846 1960 98 0 0 chr17 12505861 12506107 -76998446 - AluSx SINE Alu -11 301 56 938 227 21 65 chr17 12506107 12506368 -76998185 + L2 LINE L2 2468 2716 -598 2351 95 3 0 chr17 12506368 12506664 -76997889 + AluSq SINE Alu 1 297 -16 277 140 20 0 chr17 12506665 12506715 -76997838 + L2 LINE L2 3263 3313 0 182 236 55 18 chr17 12507096 12507151 -76997402 + L2 LINE L2 3216 3272 0 2060 126 0 3 chr17 12507626 12507949 -76996604 - AluSx SINE Alu 0 322 1 297 289 20 92 chr17 12508837 12508989 -76995564 - MLT1K LTR MaLR -8 580 440 287 302 184 11 chr17 12509007 12509186 -76995367 - MLT1K LTR MaLR -369 219 10 2683 134 16 19 chr17 12509304 12509737 -76994816 - MSTB1 LTR MaLR 0 432 1 874 142 123 0 chr17 12511117 12511272 -76993281 - MER5A DNA MER1_type 0 189 16 2647 187 71 4 chr17 12511491 12512015 -76992538 - MER89 LTR ERV1 0 559 1 2273 131 0 0 chr17 12512223 12512535 -76992018 + AluSx SINE Alu 1 312 0 357 369 23 11 chr17 12513280 12513456 -76991097 - MIR3 SINE MIR -16 192 15 22 0 0 0 chr17 12514515 12514537 -76990016 + AT_rich Low_complexity Low_complexity 1 22 0 426 305 35 7 chr17 12515056 12515197 -76989356 + MIR SINE MIR 42 186 -76 215 208 0 42 chr17 12515459 12515507 -76989046 - L2 LINE L2 -18 3254 3209 1468 292 44 8 chr17 12515620 12516159 -76988394 + L2 LINE L2 2482 3039 -274 843 263 178 2 chr17 12516160 12516575 -76987978 + HAL1 LINE L1 2020 2507 0 2640 43 0 0 chr17 12517411 12517711 -76986842 + AluY SINE Alu 1 300 -11 858 176 48 6 chr17 12517922 12518087 -76986466 - L1MA9 LINE L1 -38 6274 6103 * 1754 195 151 5 chr17 12518084 12518474 -76986079 + L1MA8 LINE L1 5489 5935 -356 1996 189 103 13 chr17 12518714 12519170 -76985383 + MLT1D LTR MaLR 3 499 -6 2747 131 72 84 chr17 12519386 12520049 -76984504 - MER4A LTR ERV1 -9 655 1 1958 166 34 53 chr17 12520557 12521114 -76983439 - MLT2A2 LTR ERVL 0 554 1 310 265 0 0 chr17 12521115 12521198 -76983355 + L1ME4a LINE L1 3896 3978 -2168 328 295 110 18 chr17 12521524 12521751 -76982802 + L1ME4a LINE L1 4370 4617 -1529 359 269 106 24 chr17 12521811 12522019 -76982534 + L1ME4a LINE L1 5735 5959 -162 198 0 0 0 chr17 12522019 12522041 -76982512 + (TG)n Simple_repeat Simple_repeat 2 23 0 * 264 59 0 0 chr17 12522040 12522074 -76982479 + (TA)n Simple_repeat Simple_repeat 1 34 0 2154 108 0 4 chr17 12522603 12522881 -76981672 - AluSg SINE Alu -33 277 1 752 83 8 75 chr17 12522888 12523021 -76981532 - L1PA13 LINE L1 -2 6161 6038 3381 120 21 53 chr17 12523023 12523180 -76981373 - L1PA13 LINE L1 -715 5459 5298 11177 20 3 1 chr17 12523180 12525228 -76979325 - L1PA3 LINE L1 0 6155 4106 3381 120 21 53 chr17 12525228 12525777 -76978776 - L1PA13 LINE L1 -876 5298 4770 443 301 24 43 chr17 12525889 12526098 -76978455 + LTR33 LTR ERVL 12 216 -305 273 304 9 0 chr17 12526392 12526504 -76978049 + L1P LINE L1 5293 5405 -763 23 0 0 0 chr17 12526579 12526602 -76977951 + AT_rich Low_complexity Low_complexity 1 23 0 231 183 37 24 chr17 12526679 12526761 -76977792 + (TTAA)n Simple_repeat Simple_repeat 1 83 0 349 316 63 15 chr17 12526761 12526967 -76977586 + L1ME LINE L1 5578 5793 -328 785 281 108 33 chr17 12527004 12527020 -76977533 + L2 LINE L2 2475 2488 -825 2531 58 0 0 chr17 12527020 12527312 -76977241 - AluY SINE Alu -19 292 1 785 281 108 33 chr17 12527312 12528065 -76976488 + L2 LINE L2 2488 3307 -6 541 296 80 75 chr17 12528090 12528479 -76976074 - L2 LINE L2 0 3313 2923 2166 116 3 10 chr17 12528543 12528844 -76975709 + AluSx SINE Alu 1 299 -13 313 358 142 21 chr17 12529006 12529265 -76975288 - L2 LINE L2 0 3313 3087 2006 124 3 24 chr17 12529265 12529593 -76974960 - AluSq SINE Alu 0 322 1 313 358 142 21 chr17 12529593 12529768 -76974785 - L2 LINE L2 -226 3087 2825 300 303 81 25 chr17 12529803 12530001 -76974552 + MLT1K LTR MaLR 377 585 -3 3057 187 75 67 chr17 12530458 12530991 -76973562 + MER54B LTR ERVL 3 546 -355 426 94 0 0 chr17 12530991 12531055 -76973498 + (TA)n Simple_repeat Simple_repeat 1 64 0 3057 187 75 67 chr17 12531055 12531415 -76973138 + MER54B LTR ERVL 546 901 0 186 317 17 0 chr17 12531514 12531574 -76972979 - MIR SINE MIR -61 147 87 380 286 71 7 chr17 12532691 12532831 -76971722 - Charlie8 DNA MER1_type -2268 149 1 3134 107 169 18 chr17 12533208 12533243 -76971310 - LTR24C LTR ERV1 0 635 607 920 118 0 15 chr17 12533243 12533378 -76971175 - FLAM_C SINE Alu 0 133 1 3134 107 169 18 chr17 12533378 12533894 -76970659 - LTR24C LTR ERV1 -28 607 1 473 365 40 0 chr17 12533965 12534187 -76970366 + MIR SINE MIR 6 236 -26 2146 112 0 23 chr17 12534594 12534898 -76969655 + AluY SINE Alu 1 297 -14 755 153 0 76 chr17 12535057 12535201 -76969352 - FLAM_C SINE Alu 0 133 1 2234 153 75 5 chr17 12535819 12536217 -76968336 + MSTA LTR MaLR 3 428 0 275 208 131 39 chr17 12536221 12536351 -76968202 + L1ME4a LINE L1 5980 6121 0 430 278 142 19 chr17 12536516 12536721 -76967832 + Charlie8 DNA MER1_type 36 265 -2152 351 134 0 175 chr17 12536934 12536979 -76967574 + MADE1 DNA Mariner 1 52 -28 2139 122 7 3 chr17 12536979 12537282 -76967271 + AluSq SINE Alu 1 304 -9 351 134 0 175 chr17 12537282 12537307 -76967246 + MADE1 DNA Mariner 52 52 -28 2268 116 3 0 chr17 12537307 12537609 -76966944 + AluSx SINE Alu 1 303 -9 351 134 0 175 chr17 12537609 12537634 -76966919 + MADE1 DNA Mariner 52 80 0 2737 135 29 0 chr17 12537705 12538119 -76966434 - MSTB LTR MaLR 0 426 1 225 203 32 114 chr17 12538127 12538250 -76966303 - HAL1b LINE L1 -490 858 746 423 298 18 75 chr17 12538528 12538730 -76965823 - HAL1 LINE L1 -780 1727 1556 2365 88 10 0 chr17 12538730 12539037 -76965516 - AluSp SINE Alu -3 310 1 423 298 18 75 chr17 12539037 12539220 -76965333 - HAL1 LINE L1 -951 1556 1364 * 45566 33 3 1 chr17 12539202 12545349 -76959204 - L1PA3 LINE L1 0 6155 2 790 269 84 44 chr17 12545374 12545924 -76958629 - HAL1 LINE L1 -1172 1335 764 257 320 50 10 chr17 12546318 12546418 -76958135 - HAL1 LINE L1 -2399 108 5 1676 266 79 19 chr17 12547945 12548463 -76956090 - MLT1H1 LTR MaLR 0 555 7 227 360 34 34 chr17 12548961 12549136 -76955417 + MIR3 SINE MIR 33 207 -1 193 318 12 0 chr17 12549438 12549523 -76955030 - MIR SINE MIR -36 226 141 2620 47 0 0 chr17 12550815 12551116 -76953437 + AluY SINE Alu 1 301 -10 732 201 14 0 chr17 12551445 12551584 -76952969 - Charlie4 DNA MER1_type -3 1958 1818 1464 193 42 3 chr17 12551778 12552089 -76952464 + L1MB5 LINE L1 5852 6174 0 2239 117 0 0 chr17 12552139 12552439 -76952114 + AluSx SINE Alu 1 300 -12 233 292 121 21 chr17 12553559 12553799 -76950754 - L3 LINE CR1 -37 1540 1277 217 313 0 0 chr17 12554221 12554285 -76950268 - MIR SINE MIR -110 152 89 1596 147 65 187 chr17 12554308 12554442 -76950111 + L1MB3 LINE L1 5680 5829 -354 973 122 45 0 chr17 12554442 12554598 -76949955 + L1MA2 LINE L1 6142 6304 0 1596 147 65 187 chr17 12554598 12554884 -76949669 + L1MB3 LINE L1 5829 6031 -152 2090 78 28 28 chr17 12554884 12555194 -76949359 - AluSg SINE Alu 0 310 1 1596 147 65 187 chr17 12555194 12555328 -76949225 + L1MB3 LINE L1 6031 6180 -3 21 36 0 0 chr17 12555328 12555356 -76949197 + AT_rich Low_complexity Low_complexity 1 28 0 2420 99 0 3 chr17 12555367 12555680 -76948873 + AluSq SINE Alu 1 312 -1 1837 102 8 4 chr17 12555966 12556210 -76948343 - AluSx SINE Alu -67 245 1 320 271 24 0 chr17 12556330 12556415 -76948138 + L2 LINE L2 3223 3309 -4 1712 152 7 52 chr17 12556704 12557044 -76947509 - AluJb SINE Alu 0 312 1 26 0 0 0 chr17 12557214 12557240 -76947313 + AT_rich Low_complexity Low_complexity 1 26 0 257 257 169 35 chr17 12557756 12558099 -76946454 + L1ME4a LINE L1 5716 6104 -17 510 275 88 6 chr17 12559027 12559198 -76945355 - MER91B DNA MER1_type -5 185 1 2184 112 3 16 chr17 12559803 12560106 -76944447 + AluSg SINE Alu 1 299 -11 1240 209 200 0 chr17 12560252 12560577 -76943976 - MLT1B LTR MaLR 0 390 1 971 279 91 17 chr17 12560703 12561112 -76943441 - L2 LINE L2 0 3313 2875 208 320 0 0 chr17 12563125 12563175 -76941378 - L2 LINE L2 -10 3262 3213 202 403 59 21 chr17 12563226 12563412 -76941141 - L2 LINE L2 0 3272 3080 470 260 59 35 chr17 12563625 12563879 -76940674 - L1MEd LINE L1 -5037 1082 823 2334 72 3 3 chr17 12564217 12564534 -76940019 + AluSq SINE Alu 1 313 0 309 68 0 0 chr17 12565899 12565943 -76938610 + (CA)n Simple_repeat Simple_repeat 1 44 0 2412 66 3 7 chr17 12566158 12566459 -76938094 - AluY SINE Alu -11 300 1 897 241 61 13 chr17 12567456 12567767 -76936786 + MER102a DNA MER1_type 5 330 0 230 266 31 0 chr17 12567823 12567887 -76936666 - L2 LINE L2 -2 3311 3246 1632 161 77 11 chr17 12568827 12569163 -76935390 - AluJo SINE Alu 0 355 1 2060 147 10 0 chr17 12569534 12569841 -76934712 - AluSx SINE Alu -2 310 1 560 250 31 0 chr17 12570307 12570435 -76934118 - MER117 DNA MER1_type -49 148 17 2167 117 0 10 chr17 12570732 12571030 -76933523 - AluSx SINE Alu -17 295 1 421 75 0 0 chr17 12571129 12571182 -76933371 - tRNA-Arg-CGC tRNA tRNA -23 53 1 3849 52 10 20 chr17 12571567 12572068 -76932485 + L1PA8 LINE L1 5677 6172 0 234 258 45 22 chr17 12573146 12573235 -76931318 - MIR SINE MIR -49 213 123 1711 184 66 8 chr17 12573648 12574028 -76930525 - L1MD1 LINE L1 0 6242 5841 276 291 7 68 chr17 12574032 12574180 -76930373 + MARNA DNA Mariner 45 183 -403 240 200 0 0 chr17 12574206 12574251 -76930302 - MER58A DNA MER1_type 0 224 180 937 196 58 27 chr17 12574253 12574477 -76930076 - MLT1B LTR MaLR -159 231 1 832 165 133 6 chr17 12574491 12574649 -76929904 - MER58A DNA MER1_type -46 178 1 1433 167 75 35 chr17 12574892 12574985 -76929568 - Charlie5 DNA MER1_type -1 2623 2535 1981 129 14 0 chr17 12574985 12575271 -76929282 + AluSq SINE Alu 1 290 -23 1433 167 75 35 chr17 12575271 12575548 -76929005 - Charlie5 DNA MER1_type -89 2535 2238 545 208 0 0 chr17 12575577 12575678 -76928875 - Charlie5 DNA MER1_type -2506 106 6 397 264 101 44 chr17 12575804 12575963 -76928590 + MIR SINE MIR 23 190 -72 1555 204 57 64 chr17 12575996 12576291 -76928262 - MLT1C LTR MaLR 0 467 175 2392 88 7 0 chr17 12576291 12576597 -76927956 - AluSc SINE Alu -1 308 1 1555 204 57 64 chr17 12576597 12576771 -76927782 - MLT1C LTR MaLR -292 175 1 209 149 43 0 chr17 12577057 12577104 -76927449 + (CTTTG)n Simple_repeat Simple_repeat 1 49 0 23 0 0 0 chr17 12577353 12577376 -76927177 + AT_rich Low_complexity Low_complexity 1 23 0 334 258 83 33 chr17 12578022 12578142 -76926411 - L2 LINE L2 -19 3253 3128 207 100 0 75 chr17 12578872 12578912 -76925641 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 1553 202 91 33 chr17 12579078 12579474 -76925079 - LTR52 LTR ERVL 0 421 3 1390 111 16 74 chr17 12579504 12579590 -76924963 + MER30 DNA MER1_type 1 90 -140 2206 107 0 0 chr17 12579590 12579891 -76924662 + AluSx SINE Alu 1 301 0 1390 111 16 74 chr17 12579891 12580047 -76924506 + MER30 DNA MER1_type 90 230 0 189 237 79 13 chr17 12580473 12580549 -76924004 - L2 LINE L2 -769 2545 2465 2380 98 0 0 chr17 12581235 12581542 -76923011 + AluSg1 SINE Alu 1 307 -2 542 218 15 15 chr17 12581578 12581711 -76922842 + L1MB8 LINE L1 6040 6172 -6 2194 117 7 7 chr17 12581807 12582115 -76922438 + AluSx SINE Alu 3 310 -2 434 335 165 32 chr17 12582156 12582525 -76922028 - L2 LINE L2 -2369 945 626 2459 83 0 6 chr17 12582525 12582837 -76921716 + AluSg SINE Alu 1 310 0 434 335 165 32 chr17 12582837 12583056 -76921497 - L2 LINE L2 -2688 626 279 2306 92 0 7 chr17 12583128 12583432 -76921121 + AluSc SINE Alu 1 302 -7 280 302 23 0 chr17 12583687 12583773 -76920780 + MIR SINE MIR 41 128 -80 4002 89 30 27 chr17 12584305 12584521 -76920032 + L1PA11 LINE L1 5575 5789 -385 2376 108 0 0 chr17 12584521 12584828 -76919725 + AluSq SINE Alu 1 307 -6 4002 89 30 27 chr17 12584828 12585209 -76919344 + L1PA11 LINE L1 5789 6174 0 1911 100 38 14 chr17 12585252 12585365 -76919188 - MER4B LTR ERV1 -314 296 187 2125 103 35 0 chr17 12585365 12585647 -76918906 + AluSp SINE Alu 1 292 -21 1911 100 38 14 chr17 12585647 12585822 -76918731 - MER4B LTR ERV1 -423 187 1 293 269 0 0 chr17 12586174 12586241 -76918312 + MER74B LTR ERVL 1 67 -555 758 167 8 24 chr17 12586325 12586451 -76918102 + MER8 DNA MER2_type 116 239 0 534 184 0 0 chr17 12586483 12586581 -76917972 - L1MA5A LINE L1 -4 6293 6196 4111 133 74 1 chr17 12586581 12587230 -76917323 - LTR62 LTR ERVK -5 714 19 682 97 0 10 chr17 12587238 12587341 -76917212 - L1MA5A LINE L1 -94 6203 6102 1946 249 34 15 chr17 12587341 12587864 -76916689 + MER74B LTR ERVL 80 612 -10 6127 206 46 51 chr17 12587910 12588151 -76916402 - L1MB8 LINE L1 0 6178 5937 2472 65 3 0 chr17 12588151 12588444 -76916109 + AluY SINE Alu 1 294 -17 6127 206 46 51 chr17 12588444 12590199 -76914354 - L1MB8 LINE L1 -241 5937 4175 2046 92 4 8 chr17 12590199 12590461 -76914092 - AluSc SINE Alu -16 293 33 6127 206 46 51 chr17 12590461 12591062 -76913491 - L1MB8 LINE L1 -2003 4175 3595 2281 119 0 0 chr17 12591062 12591357 -76913196 + AluSx SINE Alu 1 295 -17 6127 206 46 51 chr17 12591357 12591582 -76912971 - L1MB8 LINE L1 -2583 3595 3370 2605 68 0 0 chr17 12591679 12591988 -76912565 + AluY SINE Alu 3 311 0 876 285 123 36 chr17 12592505 12593080 -76911473 - HAL1 LINE L1 -586 1921 1297 736 303 72 18 chr17 12593087 12593420 -76911133 + L2 LINE L2 2406 2756 -558 2152 108 7 0 chr17 12593420 12593742 -76910811 + AluSc SINE Alu 1 309 0 245 295 13 13 chr17 12595206 12595284 -76909269 + GA-rich Low_complexity Low_complexity 1 78 0 2425 89 0 9 chr17 12595318 12595633 -76908920 - AluSq SINE Alu -1 312 1 1768 161 7 4 chr17 12596382 12596707 -76907846 - AluJb SINE Alu 0 326 1 2273 95 3 7 chr17 12596880 12597174 -76907379 + AluSx SINE Alu 1 293 -19 2709 49 0 0 chr17 12597390 12597698 -76906855 + AluY SINE Alu 1 308 -3 2166 96 3 7 chr17 12598205 12598487 -76906066 - AluSp SINE Alu -7 306 26 2473 106 0 0 chr17 12598515 12598827 -76905726 + AluSx SINE Alu 1 312 0 2007 115 0 0 chr17 12599035 12599295 -76905258 + AluSq SINE Alu 1 260 -53 833 105 0 0 chr17 12599295 12599400 -76905153 + AluSg/x SINE Alu 159 263 -49 2178 77 0 15 chr17 12601229 12601544 -76903009 - AluSq SINE Alu 0 323 13 2013 73 0 0 chr17 12601544 12601787 -76902766 - AluYb8 SINE Alu -73 245 1 2503 88 0 0 chr17 12602793 12603100 -76901453 - AluSx SINE Alu -5 307 1 243 0 0 0 chr17 12604212 12604239 -76900314 + (A)n Simple_repeat Simple_repeat 1 27 0 319 241 135 15 chr17 12604276 12604409 -76900144 - MER103 DNA DNA -10 156 8 6909 76 9 3 chr17 12604418 12605752 -76898801 - L1PA11 LINE L1 0 6174 4834 468 51 0 0 chr17 12606268 12606327 -76898226 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 883 134 0 0 chr17 12606328 12606447 -76898106 - AluSq/x SINE Alu -194 119 1 376 280 11 0 chr17 12607032 12607125 -76897428 - MER5A DNA MER1_type -85 104 11 2635 62 0 0 chr17 12607201 12607510 -76897043 - AluY SINE Alu -2 309 1 972 176 6 0 chr17 12607519 12607695 -76896858 + MER5A DNA MER1_type 8 184 -5 470 120 60 40 chr17 12607830 12607930 -76896623 + L1MB3 LINE L1 6080 6181 -2 484 104 0 0 chr17 12608748 12608815 -76895738 + MER5A DNA MER1_type 9 75 -114 1191 70 0 0 chr17 12608816 12608959 -76895594 + AluY SINE Alu 157 299 -12 466 152 181 0 chr17 12608960 12609065 -76895488 + MER5A DNA MER1_type 66 189 0 237 281 56 11 chr17 12609283 12609372 -76895181 - MLT1E LTR MaLR -500 93 1 198 253 58 23 chr17 12610450 12610537 -76894016 + MER5A DNA MER1_type 97 186 -3 * 524 151 0 0 chr17 12610461 12610547 -76894006 - MER5A DNA MER1_type -96 93 8 398 237 11 0 chr17 12610621 12610714 -76893839 + MER5A DNA MER1_type 11 104 -85 2546 72 3 0 chr17 12611551 12611856 -76892697 - AluSp SINE Alu -7 306 1 2595 38 0 22 chr17 12612612 12612928 -76891625 - AluY SINE Alu -2 309 1 2207 97 13 7 chr17 12613138 12613438 -76891115 - AluSx SINE Alu -10 302 1 2575 63 0 0 chr17 12613550 12613850 -76890703 - AluSg SINE Alu -10 300 1 1414 193 7 48 chr17 12614524 12614819 -76889734 + AluJb SINE Alu 1 283 -29 198 0 0 0 chr17 12614828 12614850 -76889703 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 2292 73 10 3 chr17 12616369 12616657 -76887896 + AluSg SINE Alu 16 305 -5 1760 181 0 23 chr17 12616766 12617075 -76887478 - AluJo SINE Alu -10 302 1 717 97 35 14 chr17 12617984 12618128 -76886425 + (TGGA)n Simple_repeat Simple_repeat 4 150 0 21 0 0 0 chr17 12618642 12618663 -76885890 + AT_rich Low_complexity Low_complexity 1 21 0 215 259 141 12 chr17 12618985 12619070 -76885483 - MIR SINE MIR -123 139 44 217 143 0 24 chr17 12619489 12619531 -76885022 + (TCCC)n Simple_repeat Simple_repeat 1 41 0 619 38 19 38 chr17 12619871 12619977 -76884576 + (TAGA)n Simple_repeat Simple_repeat 3 106 0 206 255 10 20 chr17 12619978 12620076 -76884477 + (TA)n Simple_repeat Simple_repeat 1 97 0 2560 66 3 0 chr17 12621066 12621370 -76883183 - AluY SINE Alu -6 305 1 2371 83 3 0 chr17 12621573 12621875 -76882678 + AluY SINE Alu 1 303 -8 244 235 98 39 chr17 12622924 12623026 -76881527 + MER5A DNA MER1_type 80 187 -2 2107 124 0 3 chr17 12623432 12623730 -76880823 + AluSx SINE Alu 2 298 -14 1004 238 0 0 chr17 12623751 12623953 -76880600 + L1PB4 LINE L1 5927 6128 -28 1156 53 0 0 chr17 12623953 12624085 -76880468 + AluY SINE Alu 1 132 -179 2271 104 0 7 chr17 12624092 12624399 -76880154 + AluSx SINE Alu 1 305 -7 2366 96 0 3 chr17 12624558 12624870 -76879683 + AluY SINE Alu 1 311 0 1059 169 86 25 chr17 12625584 12625862 -76878691 + MER33 DNA MER1_type 7 301 -23 2196 82 58 7 chr17 12625949 12626241 -76878312 - AluSg SINE Alu -3 307 1 2382 85 3 3 chr17 12626401 12626706 -76877847 - AluSx SINE Alu -7 305 1 2212 114 10 0 chr17 12627658 12627955 -76876598 - AluSp SINE Alu -13 300 1 1753 161 6 22 chr17 12628232 12628554 -76875999 - L1MC1 LINE L1 0 6333 6017 260 242 16 0 chr17 12628572 12628634 -76875919 - AluSp/q SINE Alu -7 296 234 1161 155 24 24 chr17 12628636 12628842 -76875711 - AluJo SINE Alu -106 206 1 1097 146 0 0 chr17 12629575 12629726 -76874827 + AluSq/x SINE Alu 1 151 -162 440 172 0 35 chr17 12629729 12629816 -76874737 + FLAM_A SINE Alu 50 133 -9 2227 121 0 0 chr17 12629819 12630116 -76874437 + AluSg SINE Alu 1 297 -13 498 233 121 0 chr17 12630118 12630234 -76874319 - MER3 DNA MER1_type -71 138 9 1576 176 6 60 chr17 12630316 12630635 -76873918 - AluJo SINE Alu -10 302 1 448 143 26 0 chr17 12630635 12630712 -76873841 + MER3 DNA MER1_type 125 203 -6 302 222 0 0 chr17 12630675 12630729 -76873824 - MER3 DNA MER1_type -119 90 37 * 1350 187 16 89 chr17 12630971 12631367 -76873186 - MLT1A2 LTR MaLR 0 390 4 1722 61 223 4 chr17 12631706 12631953 -76872600 + AluY SINE Alu 1 301 -10 1020 233 75 19 chr17 12631957 12632330 -76872223 + L1MEc LINE L1 1195 1588 -5133 1140 267 35 41 chr17 12632345 12632855 -76871698 + L1MEc LINE L1 1535 2041 -4680 748 143 0 8 chr17 12632856 12632975 -76871578 + AluSg/x SINE Alu 191 308 -1 1161 243 53 9 chr17 12632975 12633312 -76871241 + L1MEc LINE L1 2042 2393 -4328 1063 203 18 57 chr17 12633314 12633541 -76871012 + MER58A DNA MER1_type 7 224 0 2005 251 54 30 chr17 12633588 12633693 -76870860 + L1MEc LINE L1 2521 2622 -3918 1711 238 50 53 chr17 12633693 12634257 -76870296 - MER68 LTR ERV1 0 562 1 2005 251 54 30 chr17 12634257 12634895 -76869658 + L1MEc LINE L1 2622 3282 -3258 1618 249 60 14 chr17 12634904 12635539 -76869014 + L1MEc LINE L1 3330 3993 -2547 * 1690 206 16 39 chr17 12635533 12635921 -76868632 + L1MEc LINE L1 20 398 -6142 1171 163 0 0 chr17 12635921 12636117 -76868436 + L1MD1 LINE L1 6042 6237 -5 2143 146 40 22 chr17 12636126 12636531 -76868022 + L1MC1 LINE L1 5673 6084 -249 242 184 0 20 chr17 12636546 12636595 -76867958 + L1MC2 LINE L1 6041 6088 -256 1692 135 10 24 chr17 12636650 12636938 -76867615 + L1MC1 LINE L1 6050 6333 0 1197 295 77 14 chr17 12636944 12637453 -76867100 + L1MEc LINE L1 4008 4548 -1992 301 288 16 40 chr17 12637884 12638009 -76866544 - MER117 DNA MER1_type -75 122 1 2534 87 0 0 chr17 12638330 12638639 -76865914 + AluSx SINE Alu 1 309 -3 2095 116 3 20 chr17 12638648 12638950 -76865603 + AluSx SINE Alu 1 297 -15 2399 96 0 0 chr17 12639209 12639511 -76865042 + AluSx SINE Alu 1 302 -10 703 235 149 5 chr17 12640621 12640842 -76863711 + MIR SINE MIR 2 254 -8 688 67 11 0 chr17 12640873 12640963 -76863590 - AluSg/x SINE Alu -45 267 177 684 167 127 0 chr17 12641172 12641322 -76863231 + MLT1C LTR MaLR 8 176 -291 2493 74 3 0 chr17 12641329 12641627 -76862926 + AluSp SINE Alu 1 299 -14 1012 146 52 38 chr17 12641643 12641856 -76862697 + L1PA16 LINE L1 5951 6166 0 1315 197 42 8 chr17 12642040 12642299 -76862254 + MLT1C LTR MaLR 200 467 0 6993 211 58 57 chr17 12642689 12644584 -76859969 + L1M4 LINE L1 5 1897 -4747 192 40 0 0 chr17 12644584 12644609 -76859944 + (GA)n Simple_repeat Simple_repeat 2 26 0 6993 211 58 57 chr17 12644609 12644955 -76859598 + L1M4 LINE L1 1897 2241 -4403 1931 116 94 0 chr17 12644955 12645231 -76859322 + AluSx SINE Alu 1 302 -10 6993 211 58 57 chr17 12645231 12645277 -76859276 + L1M4 LINE L1 2241 2285 -4359 1785 173 3 10 chr17 12645277 12645583 -76858970 - AluJo SINE Alu -8 304 1 6993 211 58 57 chr17 12645583 12646219 -76858334 + L1M4 LINE L1 2285 3050 -3594 795 211 0 0 chr17 12646231 12646373 -76858180 + L1MB7 LINE L1 6009 6150 -34 539 214 84 26 chr17 12646694 12646848 -76857705 + MER103 DNA DNA 2 164 -2 257 326 74 0 chr17 12647095 12647190 -76857363 + L2 LINE L2 3171 3272 0 222 215 31 15 chr17 12648095 12648160 -76856393 + MER5A DNA MER1_type 123 188 -1 800 263 5 10 chr17 12648169 12648367 -76856186 - MER58A DNA MER1_type 0 224 28 2318 98 0 0 chr17 12648562 12648858 -76855695 - AluSx SINE Alu -16 296 1 613 158 267 7 chr17 12649072 12649218 -76855335 - MER5A DNA MER1_type 0 189 6 2287 90 10 26 chr17 12649556 12649867 -76854686 + AluSc SINE Alu 1 306 -3 2700 90 58 21 chr17 12649932 12650364 -76854189 + LTR7 LTR ERV1 1 448 -2 16412 97 27 24 chr17 12650366 12653468 -76851085 + HERVH LTR ERV1 1 2987 -4726 878 129 20 7 chr17 12653462 12653609 -76850944 + HERVH LTR ERV1 3140 3288 -4425 * 974 142 0 7 chr17 12653601 12653749 -76850804 + HERVH LTR ERV1 3492 3638 -4075 * 1247 147 0 1 chr17 12653739 12654100 -76850453 + HERVH LTR ERV1 4744 5149 -2564 2634 92 50 35 chr17 12654101 12654690 -76849863 + HERVH LTR ERV1 5600 7713 0 2645 95 58 21 chr17 12654690 12655122 -76849431 + LTR7 LTR ERV1 1 448 -2 258 32 0 0 chr17 12657012 12657043 -76847510 + (T)n Simple_repeat Simple_repeat 1 31 0 472 229 78 52 chr17 12657267 12657498 -76847055 - L1ME4a LINE L1 -1 6120 5884 216 0 0 0 chr17 12657957 12657981 -76846572 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 695 288 97 59 chr17 12658013 12658551 -76846002 - L1ME4a LINE L1 -263 5858 5304 2198 88 14 7 chr17 12658606 12658890 -76845663 - AluSx SINE Alu -21 291 6 299 249 46 86 chr17 12658930 12659127 -76845426 - L1ME4a LINE L1 -1318 4828 4640 1409 85 5 35 chr17 12659495 12659694 -76844859 - AluSq SINE Alu -12 301 109 450 209 0 0 chr17 12659885 12659971 -76844582 + L1MC1 LINE L1 6248 6333 0 658 203 114 46 chr17 12660004 12660039 -76844514 + MER112 DNA MER1_type 8 39 -221 1136 183 72 113 chr17 12660039 12660427 -76844126 + MLT1A2 LTR MaLR 3 374 0 658 203 114 46 chr17 12660427 12660628 -76843925 + MER112 DNA MER1_type 39 260 0 378 0 0 0 chr17 12660834 12660876 -76843677 + (TG)n Simple_repeat Simple_repeat 2 43 0 480 290 107 18 chr17 12661883 12662107 -76842446 + MIR SINE MIR 3 246 -16 2115 102 20 16 chr17 12662678 12662983 -76841570 - AluSc SINE Alu -3 306 1 207 0 0 0 chr17 12662995 12663018 -76841535 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 585 280 86 11 chr17 12663483 12663669 -76840884 + MIR SINE MIR 4 203 -59 362 278 23 53 chr17 12663770 12663903 -76840650 + L2 LINE L2 3169 3297 -16 2313 124 33 28 chr17 12664148 12664510 -76840043 + THE1B LTR MaLR 1 364 0 27 0 0 0 chr17 12664739 12664766 -76839787 + AT_rich Low_complexity Low_complexity 1 27 0 2168 185 92 184 chr17 12666310 12667008 -76837545 + L1MEc LINE L1 35 656 -5740 1060 157 42 60 chr17 12667008 12667053 -76837500 + AluJo SINE Alu 92 136 -176 2309 107 0 0 chr17 12667053 12667352 -76837201 + AluSx SINE Alu 1 299 -13 1060 157 42 60 chr17 12667352 12667522 -76837031 + AluJo SINE Alu 136 303 -9 2168 185 92 184 chr17 12667522 12668009 -76836544 + L1MEc LINE L1 656 1186 -5210 789 209 63 106 chr17 12667995 12668386 -76836167 + L1MEc LINE L1 1058 1383 -4832 * 394 264 42 16 chr17 12668430 12668598 -76835955 + L1ME2 LINE L1 5860 6035 -142 2456 254 65 45 chr17 12669748 12670535 -76834018 + MER21B LTR ERV1 1 803 -60 2525 61 0 13 chr17 12671715 12672026 -76832527 + AluY SINE Alu 1 307 -4 1666 163 101 88 chr17 12672532 12672736 -76831817 - Tigger2a DNA MER2_type -2274 434 234 2522 66 0 0 chr17 12672736 12673038 -76831515 + AluY SINE Alu 1 302 -9 1666 163 101 88 chr17 12673038 12673231 -76831322 - Tigger2a DNA MER2_type -2474 234 32 1729 123 0 20 chr17 12673305 12673556 -76830997 + AluSq SINE Alu 3 248 -65 2199 114 0 0 chr17 12673577 12673876 -76830677 + AluSx SINE Alu 1 299 -13 519 203 178 6 chr17 12673879 12674042 -76830511 + L1MEc LINE L1 2660 2850 -3365 651 197 107 26 chr17 12674195 12674429 -76830124 + L1MEc LINE L1 2850 3102 -3113 22 0 0 0 chr17 12674431 12674453 -76830100 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr17 12674701 12674739 -76829814 + AT_rich Low_complexity Low_complexity 1 38 0 208 271 94 24 chr17 12674904 12674989 -76829564 - MIR SINE MIR -4 258 168 247 171 92 26 chr17 12675082 12675158 -76829395 + MER20B DNA MER1_type 43 123 -660 234 222 0 0 chr17 12675894 12675939 -76828614 - L2 LINE L2 -19 3294 3250 203 0 37 0 chr17 12676221 12676248 -76828305 + (TC)n Simple_repeat Simple_repeat 1 28 0 31 0 0 0 chr17 12676602 12676633 -76827920 + AT_rich Low_complexity Low_complexity 1 31 0 354 182 0 69 chr17 12676640 12676799 -76827754 + (CATGT)n Simple_repeat Simple_repeat 3 150 0 278 346 85 11 chr17 12676808 12676996 -76827557 + L3 LINE CR1 1184 1385 -192 180 0 0 0 chr17 12676999 12677019 -76827534 + (T)n Simple_repeat Simple_repeat 1 20 0 1047 98 0 0 chr17 12677019 12677152 -76827401 - AluSq/x SINE Alu -179 133 1 808 300 102 20 chr17 12677756 12678099 -76826454 - L2 LINE L2 0 3313 2943 1841 158 28 0 chr17 12678102 12678393 -76826160 - AluSx SINE Alu -9 303 5 1445 227 159 34 chr17 12678419 12678604 -76825949 - L2 LINE L2 -1139 2175 2014 1685 143 14 38 chr17 12678604 12678891 -76825662 + AluSp SINE Alu 2 281 -32 231 36 0 0 chr17 12678891 12678919 -76825634 + (GAAA)n Simple_repeat Simple_repeat 4 31 0 1445 227 159 34 chr17 12678919 12679261 -76825292 - L2 LINE L2 -1299 2015 1581 1695 126 38 31 chr17 12679407 12679524 -76825029 + L1MA7 LINE L1 5997 6112 -179 2283 82 0 0 chr17 12679524 12679837 -76824716 + AluY SINE Alu 1 313 0 1695 126 38 31 chr17 12679837 12680011 -76824542 + L1MA7 LINE L1 6112 6291 0 210 263 18 0 chr17 12680190 12680247 -76824306 + GA-rich Low_complexity Low_complexity 1 58 0 2196 117 7 3 chr17 12680295 12680603 -76823950 + AluSc SINE Alu 1 309 0 212 356 34 39 chr17 12680668 12680822 -76823731 - MIR SINE MIR -63 145 3 2035 95 56 7 chr17 12681350 12681634 -76822919 + AluSg SINE Alu 1 298 -12 1208 257 39 81 chr17 12681975 12682127 -76822426 + Charlie7 DNA MER1_type 116 273 -2339 2420 75 0 7 chr17 12682127 12682422 -76822131 + AluSg SINE Alu 1 293 -17 1208 257 39 81 chr17 12682422 12682782 -76821771 + Charlie7 DNA MER1_type 273 604 -2008 2378 100 3 0 chr17 12682782 12683092 -76821461 + AluSp SINE Alu 1 311 -2 1208 257 39 81 chr17 12683092 12683147 -76821406 + Charlie7 DNA MER1_type 604 660 -1952 22 56 0 0 chr17 12683172 12683208 -76821345 + AT_rich Low_complexity Low_complexity 1 36 0 237 236 30 6 chr17 12683233 12683398 -76821155 + (TA)n Simple_repeat Simple_repeat 2 170 0 348 180 180 62 chr17 12683398 12683526 -76821027 + Charlie7 DNA MER1_type 733 875 -1737 * 1656 220 113 32 chr17 12683522 12684122 -76820431 + Charlie7 DNA MER1_type 1956 2604 -8 355 283 72 26 chr17 12684146 12684298 -76820255 - MER5A DNA MER1_type -6 183 25 530 265 0 15 chr17 12684538 12684670 -76819883 + MIR SINE MIR 107 236 -26 817 213 73 0 chr17 12684777 12684927 -76819626 + AluJb SINE Alu 133 293 -19 228 67 0 0 chr17 12685202 12685232 -76819321 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 239 176 235 29 chr17 12686408 12686476 -76818077 + Charlie8 DNA MER1_type 1 82 -2335 733 171 0 8 chr17 12686530 12686675 -76817878 - FLAM_A SINE Alu 0 144 1 2412 106 0 0 chr17 12687618 12687929 -76816624 - AluSx SINE Alu -1 311 1 2329 78 0 7 chr17 12688596 12688892 -76815661 - AluSc SINE Alu -15 294 1 2196 123 0 3 chr17 12689559 12689860 -76814693 - AluSc SINE Alu -9 300 1 2401 99 0 0 chr17 12689872 12690174 -76814379 - AluSg SINE Alu -7 303 2 1531 255 144 15 chr17 12690259 12690862 -76813691 - L1MC4a LINE L1 -1712 6096 5416 880 242 11 6 chr17 12690863 12691041 -76813512 - AluJb SINE Alu -22 290 112 407 290 28 46 chr17 12691041 12691132 -76813421 - L1MC4a LINE L1 -777 5369 5278 2297 99 0 0 chr17 12691132 12691426 -76813127 - AluSc SINE Alu -15 294 1 407 290 28 46 chr17 12691426 12691551 -76813002 - L1MC4a LINE L1 -868 5278 5157 3912 158 16 40 chr17 12692280 12692945 -76811608 + L1MB7 LINE L1 5457 6105 -79 2414 68 7 0 chr17 12692945 12693241 -76811312 + AluY SINE Alu 1 298 -13 3912 158 16 40 chr17 12693241 12693307 -76811246 + L1MB7 LINE L1 6105 6171 -13 243 185 19 0 chr17 12693307 12693361 -76811192 + MER113 DNA MER1_type? 210 264 -257 263 216 118 108 chr17 12693730 12693934 -76810619 - L1MC4 LINE L1 -1 8041 7836 2059 139 0 7 chr17 12693972 12694267 -76810286 - AluSx SINE Alu -19 293 1 681 244 13 0 chr17 12694292 12694448 -76810105 - L1ME2 LINE L1 -10 6154 5997 2097 132 0 0 chr17 12694510 12694806 -76809747 - AluSx SINE Alu -16 296 1 271 241 25 0 chr17 12694991 12695070 -76809483 - L1ME2 LINE L1 -383 5738 5658 1940 147 3 3 chr17 12695091 12695384 -76809169 + AluSx SINE Alu 1 293 -19 2323 94 3 0 chr17 12695772 12696069 -76808484 + AluSp SINE Alu 1 298 -15 1822 123 168 26 chr17 12696466 12696806 -76807747 - MLT1B LTR MaLR 0 390 3 195 114 0 0 chr17 12697105 12697140 -76807413 + (TA)n Simple_repeat Simple_repeat 1 35 0 2085 97 3 40 chr17 12697140 12697440 -76807113 - AluSx SINE Alu -23 289 1 387 0 0 0 chr17 12697471 12697514 -76807039 + (TG)n Simple_repeat Simple_repeat 2 44 0 226 273 246 0 chr17 12698402 12698512 -76806041 - MER5A DNA MER1_type -3 186 50 406 272 111 112 chr17 12698816 12699738 -76804815 + L1M2 LINE L1 530 1374 -5475 201 74 0 0 chr17 12699908 12699935 -76804618 + (A)n Simple_repeat Simple_repeat 1 27 0 294 280 13 0 chr17 12701059 12701134 -76803419 - L2 LINE L2 -301 2971 2896 194 263 70 18 chr17 12701762 12701819 -76802734 - L2 LINE L2 -5 3267 3208 449 290 161 18 chr17 12701893 12702117 -76802436 + MIR SINE MIR 7 262 0 481 276 39 54 chr17 12703322 12703525 -76801028 + MIR SINE MIR 17 216 -46 203 182 91 45 chr17 12704678 12704744 -76799809 - MIR SINE MIR -67 195 127 452 266 84 0 chr17 12706177 12706320 -76798233 - MIR SINE MIR -36 226 72 232 221 325 0 chr17 12707109 12707186 -76797367 - MIR SINE MIR -68 140 39 21 89 0 0 chr17 12707505 12707561 -76796992 + AT_rich Low_complexity Low_complexity 1 56 0 1437 143 129 49 chr17 12707833 12708119 -76796434 + AluJo SINE Alu 1 309 -3 22 0 0 0 chr17 12708784 12708806 -76795747 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17 12710171 12710199 -76794354 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 12710615 12710636 -76793917 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 12710880 12710908 -76793645 + AT_rich Low_complexity Low_complexity 1 28 0 1859 163 14 0 chr17 12711023 12711312 -76793241 - AluJo SINE Alu -19 293 1 1323 182 14 5 chr17 12712044 12712264 -76792289 - AluJo SINE Alu -90 222 1 220 336 84 8 chr17 12712721 12712840 -76791713 - L2 LINE L2 -4 3309 3182 2226 98 7 0 chr17 12713412 12713709 -76790844 + AluSp SINE Alu 1 299 -14 23 0 0 0 chr17 12713721 12713744 -76790809 + AT_rich Low_complexity Low_complexity 1 23 0 825 208 71 0 chr17 12716832 12717000 -76787553 - MIR SINE MIR -21 241 62 1461 229 88 41 chr17 12717563 12718202 -76786351 - L1MC5 LINE L1 -37 7924 7256 283 304 100 26 chr17 12719698 12719928 -76784625 + HsTC2 DNA Tc2 566 812 -1086 2230 96 48 0 chr17 12720075 12720367 -76784186 + AluSq SINE Alu 1 306 -7 1300 146 28 5 chr17 12720626 12720838 -76783715 + AluJb SINE Alu 87 303 -9 2529 51 0 0 chr17 12720942 12721236 -76783317 + AluY SINE Alu 1 294 -17 2404 185 49 130 chr17 12721530 12722339 -76782214 - MER21B LTR ERV1 -107 756 13 1595 143 47 53 chr17 12722719 12723041 -76781512 - MER21A LTR ERV1 -6 925 606 924 158 55 18 chr17 12723038 12723203 -76781350 - MER21B LTR ERV1 -692 171 1 * 577 262 34 30 chr17 12725528 12725720 -76778833 - MIR SINE MIR -57 205 18 219 329 81 34 chr17 12725940 12726089 -76778464 - MIR SINE MIR -1 261 106 845 168 0 0 chr17 12726213 12726344 -76778209 - FLAM_C SINE Alu -2 131 1 2233 98 0 0 chr17 12726814 12727133 -76777420 - AluSq SINE Alu 0 319 1 1083 244 19 40 chr17 12727739 12728063 -76776490 - MLT1H LTR MaLR -230 319 3 196 289 0 67 chr17 12728439 12728529 -76776024 - L2 LINE L2 -4 3268 3185 252 239 0 0 chr17 12729446 12729492 -76775061 - LTR67 LTR ERVL -6 551 506 189 260 41 55 chr17 12729533 12729606 -76774947 - L2 LINE L2 -1 3271 3200 369 256 34 26 chr17 12730936 12731053 -76773500 - MLT1D LTR MaLR -387 118 1 526 223 42 58 chr17 12731053 12731254 -76773299 - MLT1D-int LTR MaLR 0 1727 1237 295 152 0 0 chr17 12731252 12731298 -76773255 - MLT1D-int LTR MaLR -339 1032 987 * 412 278 138 41 chr17 12735599 12736034 -76768519 - HAL1 LINE L1 -1030 1477 1001 201 209 30 104 chr17 12736269 12736336 -76768217 - MIR SINE MIR -181 81 20 884 135 0 0 chr17 12736408 12736541 -76768012 - FLAM_C SINE Alu 0 133 1 598 188 122 83 chr17 12736708 12736996 -76767557 - L1MC5 LINE L1 -32 7929 7631 1714 146 45 17 chr17 12738072 12738360 -76766193 + AluJb SINE Alu 1 296 -16 270 81 0 0 chr17 12738905 12738942 -76765611 + (TG)n Simple_repeat Simple_repeat 1 37 0 2316 170 20 27 chr17 12738970 12739457 -76765096 - L1MB3 LINE L1 0 6183 5700 260 250 113 0 chr17 12740084 12740164 -76764389 - HAL1 LINE L1 -384 2123 2035 780 237 83 111 chr17 12740177 12740518 -76764035 - HAL1 LINE L1 -538 1969 1649 1642 161 39 7 chr17 12740518 12740803 -76763750 - AluJo SINE Alu -18 294 1 780 237 83 111 chr17 12740803 12741039 -76763514 - HAL1 LINE L1 -858 1649 1408 211 354 0 0 chr17 12741056 12741121 -76763432 + C-rich Low_complexity Low_complexity 4 68 0 240 200 71 0 chr17 12741121 12741191 -76763362 - HAL1 LINE L1 -1130 1377 1303 1561 217 72 60 chr17 12741230 12741867 -76762686 + L1ME2 LINE L1 4561 5205 -941 1892 157 4 0 chr17 12741867 12742147 -76762406 + AluSq SINE Alu 1 281 -32 222 171 0 0 chr17 12742182 12742223 -76762330 + GA-rich Low_complexity Low_complexity 1 41 0 2957 231 42 27 chr17 12742223 12742317 -76762236 + L1ME2 LINE L1 5211 5302 -862 963 194 227 12 chr17 12742317 12742559 -76761994 - AluJo SINE Alu -8 294 1 2957 231 42 27 chr17 12742559 12743400 -76761153 + L1ME2 LINE L1 5302 6162 -2 306 0 0 0 chr17 12743435 12743469 -76761084 + (TTA)n Simple_repeat Simple_repeat 2 35 0 2261 106 0 3 chr17 12743473 12743776 -76760777 - AluSx SINE Alu -10 302 1 939 97 15 0 chr17 12743776 12743910 -76760643 - AluSq/x SINE Alu -176 136 1 388 239 42 125 chr17 12744585 12744706 -76759847 - L1MC4a LINE L1 -1882 5926 5837 1753 140 16 42 chr17 12744706 12744872 -76759681 - AluSx SINE Alu -8 304 148 2334 32 43 0 chr17 12744872 12745153 -76759400 - AluY SINE Alu -18 293 1 1753 140 16 42 chr17 12745153 12745294 -76759259 - AluSx SINE Alu -164 148 5 388 239 42 125 chr17 12745294 12745436 -76759117 - L1MC4a LINE L1 -1971 5837 5685 400 219 12 21 chr17 12745537 12745697 -76758856 - MER20 DNA MER1_type -5 214 1 536 332 41 108 chr17 12745918 12747337 -76757216 - L2 LINE L2 -1 3271 1947 558 0 0 0 chr17 12748067 12748129 -76756424 + (TA)n Simple_repeat Simple_repeat 2 63 0 519 237 0 10 chr17 12748835 12748932 -76755621 + MER58A DNA MER1_type 6 101 -6 416 147 80 0 chr17 12748934 12749009 -76755544 + MER58A DNA MER1_type 144 224 0 830 232 140 48 chr17 12749019 12749398 -76755155 - MLT1C LTR MaLR 0 467 54 432 241 0 35 chr17 12750356 12750472 -76754081 + L3 LINE CR1 333 444 -1133 651 201 28 14 chr17 12751792 12751936 -76752617 - L1MA10 LINE L1 -10 6324 6179 2221 103 0 3 chr17 12751947 12752248 -76752305 - AluSg SINE Alu -10 300 1 2349 270 94 15 chr17 12752253 12753175 -76751378 - L1MEc LINE L1 -5346 1050 56 423 0 0 0 chr17 12754456 12754503 -76750050 + (TG)n Simple_repeat Simple_repeat 2 48 0 229 143 41 0 chr17 12755019 12755068 -76749485 + (TG)n Simple_repeat Simple_repeat 2 52 0 542 96 0 0 chr17 12755272 12755345 -76749208 - U3 snRNA snRNA -144 73 1 319 297 22 0 chr17 12755388 12755479 -76749074 - MER20B DNA MER1_type -626 157 65 691 266 65 47 chr17 12755553 12755831 -76748722 - MLT1J LTR MaLR 0 511 229 1250 200 61 61 chr17 12755929 12756289 -76748264 - MLT1B LTR MaLR -27 363 4 381 233 35 17 chr17 12756292 12756408 -76748145 - MLT1J LTR MaLR -393 118 1 982 111 26 0 chr17 12756556 12756709 -76747844 - L1MA2 LINE L1 0 6304 6148 443 228 44 63 chr17 12757239 12757397 -76747156 - L1MB8 LINE L1 -2 6176 6022 777 255 6 6 chr17 12757592 12757753 -76746800 - MLT1E LTR MaLR -432 161 1 400 343 48 12 chr17 12758908 12759074 -76745479 + MER5B DNA MER1_type 1 172 -6 2086 106 7 3 chr17 12765003 12765324 -76739229 - AluSx SINE Alu 0 322 1 198 0 0 0 chr17 12765793 12765815 -76738738 + (TTAA)n Simple_repeat Simple_repeat 4 25 0 197 114 49 57 chr17 12766581 12766704 -76737849 + (TATAA)n Simple_repeat Simple_repeat 3 124 0 * 265 68 120 0 chr17 12766674 12766791 -76737762 + (TA)n Simple_repeat Simple_repeat 1 131 0 2436 69 0 3 chr17 12767085 12767388 -76737165 - AluY SINE Alu -9 302 1 23 33 0 0 chr17 12770374 12770404 -76734149 + AT_rich Low_complexity Low_complexity 1 30 0 2446 58 0 0 chr17 12770921 12771212 -76733341 + AluY SINE Alu 1 291 -20 181 211 0 0 chr17 12772555 12772593 -76731960 + MIR SINE MIR 107 144 -118 30 0 0 0 chr17 12772800 12772830 -76731723 + AT_rich Low_complexity Low_complexity 1 30 0 327 25 0 0 chr17 12774065 12774105 -76730448 + (TG)n Simple_repeat Simple_repeat 2 41 0 195 42 0 0 chr17 12774241 12774265 -76730288 + (C)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr17 12774863 12774885 -76729668 + AT_rich Low_complexity Low_complexity 1 22 0 355 309 86 7 chr17 12775804 12775956 -76728597 - MIR SINE MIR -43 219 56 2247 105 0 0 chr17 12776374 12776669 -76727884 + AluSg SINE Alu 1 295 -15 186 191 0 0 chr17 12776670 12776712 -76727841 + (TA)n Simple_repeat Simple_repeat 1 42 0 23 0 0 0 chr17 12777060 12777083 -76727470 + AT_rich Low_complexity Low_complexity 1 23 0 2630 152 46 29 chr17 12777089 12777615 -76726938 - L1PB4 LINE L1 -14 6142 5608 5432 238 57 49 chr17 12778237 12781215 -76723338 - L1ME1 LINE L1 -6 6160 3161 180 0 0 0 chr17 12781216 12781236 -76723317 + (A)n Simple_repeat Simple_repeat 1 20 0 1579 175 0 25 chr17 12781238 12781523 -76723030 - AluJo SINE Alu -34 278 1 326 264 24 48 chr17 12781532 12781657 -76722896 - L1ME1 LINE L1 -2959 3187 3066 327 348 50 58 chr17 12781896 12782295 -76722258 - L1ME3A LINE L1 -222 5948 5553 233 232 145 0 chr17 12782366 12782435 -76722118 - MLT1J LTR MaLR -201 310 232 277 258 77 44 chr17 12783027 12783209 -76721344 - L1ME3A LINE L1 -1107 5039 4852 381 277 127 27 chr17 12783309 12783641 -76720912 - L1ME3A LINE L1 -1447 4699 4335 195 228 41 98 chr17 12783747 12783870 -76720683 - L3 LINE CR1 -75 1502 1387 329 310 148 25 chr17 12784115 12784318 -76720235 - MIR SINE MIR -34 228 1 21 0 0 0 chr17 12784766 12784787 -76719766 + AT_rich Low_complexity Low_complexity 1 21 0 466 315 74 25 chr17 12785319 12785522 -76719031 - L2 LINE L2 -92 3221 3009 210 118 0 0 chr17 12785544 12785578 -76718975 + (T)n Simple_repeat Simple_repeat 1 34 0 35 71 0 0 chr17 12786965 12787035 -76717518 + AT_rich Low_complexity Low_complexity 1 70 0 512 316 156 5 chr17 12787178 12787396 -76717157 - MIR SINE MIR -1 261 11 1081 166 43 11 chr17 12788022 12788209 -76716344 + AluJo SINE Alu 1 193 -119 21 57 0 0 chr17 12788277 12788312 -76716241 + AT_rich Low_complexity Low_complexity 1 35 0 209 292 0 0 chr17 12789617 12789682 -76714871 + T-rich Low_complexity Low_complexity 1 65 0 269 252 84 19 chr17 12789899 12790006 -76714547 - MLT1L LTR MaLR -6 609 496 2190 112 3 10 chr17 12790358 12790662 -76713891 + AluSx SINE Alu 1 302 -10 270 0 0 0 chr17 12792564 12792594 -76711959 + (TG)n Simple_repeat Simple_repeat 2 31 0 1666 135 56 0 chr17 12793432 12793698 -76710855 - Tigger3b DNA MER2_type 0 1232 952 4576 126 152 2 chr17 12794415 12795256 -76709297 - Tigger3b DNA MER2_type -262 969 3 420 242 27 0 chr17 12795285 12795409 -76709144 - L1MC4 LINE L1 -152 7890 7654 16982 122 14 40 chr17 12795424 12797346 -76707207 + Tigger4(Zombi) DNA MER2_type 5 1974 -757 5459 110 30 29 chr17 12797346 12798346 -76706207 + L1PA13 LINE L1 5164 6161 -2 2101 121 3 34 chr17 12798355 12798677 -76705876 + AluSx SINE Alu 1 312 0 16982 122 14 40 chr17 12798677 12799542 -76705011 + Tigger4(Zombi) DNA MER2_type 1982 2731 0 1198 22 0 0 chr17 12799634 12799771 -76704782 + AluY SINE Alu 165 301 -10 246 298 101 22 chr17 12799823 12800001 -76704552 - L1MC4 LINE L1 -446 7596 7405 3636 256 126 19 chr17 12800064 12800192 -76704361 - L1M4 LINE L1 -1623 4523 4410 2681 99 73 11 chr17 12800192 12800628 -76703925 + MER4C LTR ERV1 1 463 -2 3636 256 126 19 chr17 12800628 12802189 -76702364 - L1M4 LINE L1 -1736 4410 2653 2361 79 0 7 chr17 12802846 12803150 -76701403 - AluY SINE Alu -8 303 2 1305 132 129 20 chr17 12804064 12804374 -76700179 - MSTA LTR MaLR 0 364 1 1838 163 22 47 chr17 12804548 12804911 -76699642 - MLT1A1 LTR MaLR -11 354 1 2371 80 0 0 chr17 12806251 12806553 -76698000 - AluY SINE Alu -9 302 1 238 325 12 24 chr17 12807786 12807869 -76696684 - MER5A DNA MER1_type -2 187 106 753 235 17 0 chr17 12809122 12809301 -76695252 + MER106A DNA MER1_type 2 183 -53 2080 124 16 7 chr17 12809414 12809721 -76694832 - AluSg SINE Alu 0 310 1 1571 250 75 36 chr17 12809808 12810725 -76693828 + L1ME3A LINE L1 5039 5987 -183 2668 109 55 63 chr17 12810831 12811247 -76693306 - MER84 LTR ERVI 0 507 93 2114 119 0 0 chr17 12811247 12811558 -76692995 - AluSx SINE Alu 0 311 1 2668 109 55 63 chr17 12811558 12811645 -76692908 - MER84 LTR ERVI -414 93 7 400 132 40 13 chr17 12811645 12811721 -76692832 - MER84 LTR ERVI -429 78 1 1717 158 0 85 chr17 12813074 12813252 -76691301 - AluJb SINE Alu -11 301 162 2209 101 16 0 chr17 12813252 12813560 -76690993 - AluSp SINE Alu 0 313 1 1717 158 0 85 chr17 12813560 12813710 -76690843 - AluJb SINE Alu -150 162 1 2117 121 0 0 chr17 12813733 12814022 -76690531 - AluSx SINE Alu -19 293 5 357 225 200 4 chr17 12814395 12814635 -76689918 + L1MEd LINE L1 739 1025 -5094 442 210 145 8 chr17 12814640 12814764 -76689789 + MER3 DNA MER1_type 10 150 -59 220 300 43 14 chr17 12815312 12815382 -76689171 + L2 LINE L2 3201 3272 0 534 302 119 41 chr17 12815543 12815930 -76688623 + L1MEd LINE L1 818 1234 -4885 29 28 0 0 chr17 12815977 12816013 -76688540 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr17 12816069 12816092 -76688461 + AT_rich Low_complexity Low_complexity 1 23 0 230 344 6 38 chr17 12816155 12816312 -76688241 + HAL1 LINE L1 1450 1601 -906 2485 137 51 12 chr17 12816387 12816802 -76687751 - Tigger2a DNA MER2_type -3 431 1 547 292 72 11 chr17 12816839 12817233 -76687320 - LTR16A LTR ERVL 0 450 1 23 54 0 0 chr17 12817688 12817725 -76686828 + AT_rich Low_complexity Low_complexity 1 37 0 292 319 83 25 chr17 12822786 12822943 -76681610 - MIR SINE MIR -54 208 43 1074 136 41 0 chr17 12823298 12823467 -76681086 - AluSp SINE Alu -4 309 134 2168 121 10 16 chr17 12823468 12823782 -76680771 - AluSq SINE Alu -1 312 1 2039 131 3 3 chr17 12824680 12824977 -76679576 - AluSq SINE Alu -16 297 1 250 268 54 18 chr17 12825155 12825267 -76679286 + MARNA DNA Mariner 240 355 -231 305 204 159 0 chr17 12825623 12825736 -76678817 - MIR SINE MIR -54 208 78 2847 71 23 18 chr17 12825772 12826168 -76678385 + L1PB1 LINE L1 5754 6151 0 270 350 127 27 chr17 12826192 12826492 -76678061 - L2 LINE L2 -455 2859 2530 233 344 43 54 chr17 12826574 12826760 -76677793 + L2 LINE L2 2867 3050 -222 2597 11 0 0 chr17 12827343 12827625 -76676928 + AluYa5 SINE Alu 24 305 -6 239 270 0 0 chr17 12827682 12827745 -76676808 + MARNA DNA Mariner 312 374 -212 624 278 80 57 chr17 12827903 12828292 -76676261 + L1MEd LINE L1 318 715 -5404 22406 179 20 17 chr17 12828298 12833712 -76670841 + L1P4 LINE L1 7 6537 -1075 1750 149 0 44 chr17 12833712 12834051 -76670502 + AluSx SINE Alu 1 326 0 22406 179 20 17 chr17 12834051 12834742 -76669811 + L1P4 LINE L1 6537 7224 -388 1172 100 77 18 chr17 12834742 12834912 -76669641 + AluSg/x SINE Alu 133 312 0 452 194 194 69 chr17 12834913 12835145 -76669408 + L1MEd LINE L1 701 961 -5158 6219 151 39 43 chr17 12835550 12835750 -76668803 - L1MA4 LINE L1 -4 6296 6097 2375 157 51 10 chr17 12835750 12836159 -76668394 + MSTB LTR MaLR 1 426 0 6219 151 39 43 chr17 12836159 12837907 -76666646 - L1MA4 LINE L1 -203 6097 4359 1960 142 4 0 chr17 12837907 12838219 -76666334 - AluSx SINE Alu 0 313 1 6219 151 39 43 chr17 12838219 12838721 -76665832 - L1MA4 LINE L1 -1941 4359 3856 729 283 122 31 chr17 12838816 12839421 -76665132 - L1ME LINE L1 -339 5823 5161 2327 79 3 0 chr17 12839491 12839783 -76664770 + AluSp SINE Alu 1 293 -20 25 31 0 0 chr17 12839820 12839852 -76664701 + AT_rich Low_complexity Low_complexity 1 32 0 5584 117 15 0 chr17 12839852 12840500 -76664053 - L1PA16 LINE L1 -9 6157 5520 207 0 0 0 chr17 12840500 12840523 -76664030 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1898 117 34 0 chr17 12840524 12840790 -76663763 - AluSc SINE Alu -31 278 4 5584 117 15 0 chr17 12840790 12841478 -76663075 - L1PA16 LINE L1 -645 5521 4802 616 258 79 35 chr17 12841481 12841884 -76662669 - L1ME LINE L1 -1092 5054 4634 * 2314 191 44 68 chr17 12841877 12842556 -76661997 - L1MB8 LINE L1 -6 6983 6321 1000 259 104 0 chr17 12842605 12842914 -76661639 - L1MB8 LINE L1 -1124 5833 5493 2432 153 24 24 chr17 12842916 12843340 -76661213 - MSTB LTR MaLR 0 426 3 8331 165 51 24 chr17 12843341 12844945 -76659608 - MSTB-int LTR MaLR 0 1651 5 379 141 0 0 chr17 12844949 12845013 -76659540 - MSTB LTR MaLR 0 426 363 1807 140 44 44 chr17 12845045 12845410 -76659143 - MSTB LTR MaLR -49 377 13 3080 224 121 97 chr17 12845416 12845718 -76658835 - L1MB8 LINE L1 -1463 5494 5201 2058 152 0 9 chr17 12845718 12846033 -76658520 - AluSx SINE Alu 0 312 1 3080 224 121 97 chr17 12846033 12846074 -76658479 - L1MB8 LINE L1 -1756 5201 5162 732 74 0 0 chr17 12846074 12846182 -76658371 + (TTCC)n Simple_repeat Simple_repeat 4 111 0 1789 142 7 11 chr17 12846186 12846461 -76658092 - AluJb SINE Alu -38 274 1 3080 224 121 97 chr17 12846461 12846651 -76657902 - L1MB8 LINE L1 -1797 5160 4976 1770 171 0 21 chr17 12846651 12846969 -76657584 - AluSx SINE Alu 0 312 1 3080 224 121 97 chr17 12846969 12847041 -76657512 - L1MB8 LINE L1 -1981 4976 4907 985 89 0 0 chr17 12847041 12847165 -76657388 - AluSp SINE Alu -189 124 1 3080 224 121 97 chr17 12847165 12848394 -76656159 - L1MB8 LINE L1 -2050 4907 3480 368 203 93 17 chr17 12848398 12848516 -76656037 - L1MB8 LINE L1 -6659 200 74 * 2295 167 20 28 chr17 12848512 12848785 -76655768 - L1MA7 LINE L1 -237 6054 5780 908 92 43 0 chr17 12848785 12848949 -76655604 + CT-rich Low_complexity Low_complexity 2 172 0 1829 112 58 0 chr17 12848949 12849208 -76655345 - AluSc SINE Alu -35 274 1 2295 167 20 28 chr17 12849208 12849436 -76655117 - L1MA7 LINE L1 -509 5782 5556 1795 214 50 55 chr17 12849434 12850562 -76653991 - L1M4c LINE L1 -4694 2265 1182 * 518 219 0 19 chr17 12850562 12850667 -76653886 - FRAM SINE Alu -73 103 1 521 251 143 44 chr17 12850734 12850788 -76653765 - L1M4 LINE L1 -2742 3404 3357 2438 75 3 0 chr17 12850788 12851083 -76653470 - AluY SINE Alu -15 296 1 521 251 143 44 chr17 12851083 12851647 -76652906 - L1M4 LINE L1 -2789 3357 2697 2119 128 0 14 chr17 12851647 12851944 -76652609 + AluSp SINE Alu 1 293 -20 521 251 143 44 chr17 12851944 12852074 -76652479 - L1M4 LINE L1 -3449 2697 2581 762 149 0 8 chr17 12852115 12852249 -76652304 + L1PA16 LINE L1 5592 5724 -442 1711 177 16 0 chr17 12852252 12852562 -76651991 + L1PA16 LINE L1 5846 6160 -6 2112 110 11 0 chr17 12852901 12853183 -76651370 - AluSc SINE Alu -24 285 1 269 264 63 52 chr17 12853402 12853671 -76650882 + L1ME3A LINE L1 3346 3617 -2529 2449 70 3 0 chr17 12853687 12853985 -76650568 - AluY SINE Alu -12 299 1 357 300 95 42 chr17 12854000 12854263 -76650290 + L1ME3A LINE L1 4800 5076 -1070 399 239 81 143 chr17 12854264 12854357 -76650196 + L1ME3A LINE L1 5258 5355 -815 2066 113 27 7 chr17 12854357 12854649 -76649904 - AluSx SINE Alu -14 298 1 399 239 81 143 chr17 12854649 12855295 -76649258 + L1ME3A LINE L1 5355 5951 -219 1951 159 10 0 chr17 12855450 12855758 -76648795 - AluJb SINE Alu -1 311 1 517 128 23 0 chr17 12855890 12855976 -76648577 + L1M4c LINE L1 15 102 -6282 2063 112 14 0 chr17 12855981 12856267 -76648286 + AluSq SINE Alu 1 290 -23 740 128 0 40 chr17 12856276 12856401 -76648152 + Tigger1 DNA MER2_type 2299 2418 0 1722 165 0 21 chr17 12856416 12856701 -76647852 - AluJo SINE Alu -33 279 1 349 132 105 0 chr17 12856708 12856784 -76647769 + L1MB4 LINE L1 6097 6180 0 387 358 12 19 chr17 12857529 12857691 -76646862 + L1M4c LINE L1 309 469 -5903 207 352 44 0 chr17 12857784 12857875 -76646678 + MIR SINE MIR 20 114 -148 3774 24 20 0 chr17 12857882 12858334 -76646219 - L1PA4 LINE L1 -3 6152 5692 491 206 71 28 chr17 12858208 12858349 -76646204 - L1ME LINE L1 -297 5824 5678 690 262 116 30 chr17 12858747 12858980 -76645573 + MIR SINE MIR 8 260 -2 363 344 23 8 chr17 12859130 12859261 -76645292 - MIR3 SINE MIR -39 169 37 1313 270 85 4 chr17 12859592 12860085 -76644468 + L2 LINE L2 2173 2705 -609 2051 102 0 64 chr17 12860095 12860409 -76644144 + AluSg SINE Alu 1 294 -16 1166 226 4 9 chr17 12860503 12860733 -76643820 + MLT1A1 LTR MaLR 1 229 -136 314 236 0 0 chr17 12860732 12860787 -76643766 - Tigger3b DNA MER2_type -1176 55 1 * 472 159 396 0 chr17 12860787 12860864 -76643689 - L1M4b LINE L1 -1982 4975 4930 1944 86 4 8 chr17 12860864 12861119 -76643434 - AluSx SINE Alu -58 254 1 472 159 396 0 chr17 12861119 12861223 -76643330 - L1M4b LINE L1 -2027 4930 4722 1604 275 60 7 chr17 12861259 12861724 -76642829 - MER21B LTR ERV1 -62 801 312 2193 89 18 4 chr17 12861727 12862027 -76642526 - AluSx SINE Alu 0 304 1 2421 83 3 0 chr17 12862131 12862431 -76642122 + AluSx SINE Alu 1 301 -11 1060 199 29 126 chr17 12862431 12862772 -76641781 - MER21B LTR ERV1 -555 308 1 3497 244 26 88 chr17 12862772 12863096 -76641457 - L1M4b LINE L1 -2234 4723 4380 333 0 0 0 chr17 12863096 12863133 -76641420 + (TG)n Simple_repeat Simple_repeat 2 38 0 3497 244 26 88 chr17 12863133 12864536 -76640017 - L1M4b LINE L1 -2577 4380 2891 2019 144 10 3 chr17 12864536 12864834 -76639719 - AluJb SINE Alu -12 300 1 3497 244 26 88 chr17 12864834 12864845 -76639708 - L1M4b LINE L1 -4066 2891 2881 1466 131 58 4 chr17 12864845 12865105 -76639448 - L1MA3 LINE L1 -2 6303 6030 3497 244 26 88 chr17 12865105 12865636 -76638917 - L1M4b LINE L1 -4076 2881 2471 6407 230 50 46 chr17 12865814 12867537 -76637016 - L1M4b LINE L1 -4543 2416 701 1438 171 80 85 chr17 12867537 12867935 -76636618 - MSTD LTR MaLR 0 396 1 6407 230 50 46 chr17 12867935 12868374 -76636179 - L1M4b LINE L1 -6258 701 208 2402 63 3 10 chr17 12868374 12868674 -76635879 + AluY SINE Alu 1 298 -13 6407 230 50 46 chr17 12868674 12868870 -76635683 - L1M4b LINE L1 -6751 208 14 279 93 0 0 chr17 12868934 12868977 -76635576 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 2100 142 0 3 chr17 12869056 12869367 -76635186 + AluSx SINE Alu 1 310 -2 733 312 73 30 chr17 12869407 12869996 -76634557 - L1M4 LINE L1 -1918 4228 3666 285 29 0 0 chr17 12869996 12870030 -76634523 + (TG)n Simple_repeat Simple_repeat 1 34 0 733 312 73 30 chr17 12870030 12870519 -76634034 - L1M4 LINE L1 -2480 3666 3103 388 194 271 21 chr17 12870820 12870964 -76633589 + MER5A DNA MER1_type 9 188 -1 298 329 12 0 chr17 12870964 12871040 -76633513 - MIR3 SINE MIR -50 158 82 239 226 0 48 chr17 12871070 12871132 -76633421 + GA-rich Low_complexity Low_complexity 2 60 0 287 297 35 48 chr17 12871964 12872109 -76632444 + L2 LINE L2 2245 2387 -927 3246 92 2 33 chr17 12872497 12872985 -76631568 + L1PB1 LINE L1 5679 6151 0 558 231 0 0 chr17 12873480 12873649 -76630904 + (TG)n Simple_repeat Simple_repeat 1 169 0 401 283 7 0 chr17 12873666 12873818 -76630735 + (TG)n Simple_repeat Simple_repeat 2 154 0 2590 62 0 0 chr17 12874482 12874786 -76629767 - AluY SINE Alu -7 304 1 181 243 0 0 chr17 12875048 12875085 -76629468 + L2 LINE L2 3005 3041 -272 2376 164 48 40 chr17 12875152 12875422 -76629131 + MER66B LTR ERV1 7 285 -201 2015 146 0 0 chr17 12875422 12875752 -76628801 + AluSx SINE Alu 1 330 0 2376 164 48 40 chr17 12875752 12875956 -76628597 + MER66B LTR ERV1 285 486 0 2414 91 0 3 chr17 12876074 12876383 -76628170 + AluSg SINE Alu 1 308 -2 317 239 55 64 chr17 12876621 12876730 -76627823 - L2 LINE L2 -2 3311 3204 980 237 30 92 chr17 12876795 12877133 -76627420 + MER102b DNA MER1_type 15 331 -10 2283 192 45 18 chr17 12878078 12878567 -76625986 + L1ME1 LINE L1 5538 6039 -127 736 212 30 30 chr17 12878565 12878665 -76625888 - L1M4 LINE L1 -1108 5038 4939 * 234 0 0 0 chr17 12878665 12878691 -76625862 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 736 212 30 30 chr17 12878691 12878793 -76625760 - L1M4 LINE L1 -1206 4940 4836 735 261 44 4 chr17 12878921 12879147 -76625406 - MIR SINE MIR -1 261 27 194 256 0 0 chr17 12879185 12879224 -76625329 + MIR SINE MIR 217 255 -7 181 281 0 67 chr17 12879553 12879642 -76624911 + MIR SINE MIR 109 191 -71 351 257 35 44 chr17 12880179 12880292 -76624261 - L2 LINE L2 0 3272 3161 2288 151 6 0 chr17 12880856 12881206 -76623347 + MLT1A1 LTR MaLR 14 365 0 873 161 39 39 chr17 12881224 12881429 -76623124 - L1MB4 LINE L1 0 6180 5976 1626 181 38 0 chr17 12881670 12881957 -76622596 - AluJo SINE Alu -3 309 12 1965 144 3 3 chr17 12881994 12882285 -76622268 - AluJb SINE Alu -21 291 1 1944 96 8 15 chr17 12882737 12882998 -76621555 - AluSc SINE Alu -11 298 40 180 111 0 0 chr17 12882998 12883025 -76621528 + (T)n Simple_repeat Simple_repeat 1 27 0 1830 189 3 0 chr17 12883025 12883358 -76621195 - L1MC3 LINE L1 0 7785 7452 2429 89 3 0 chr17 12883388 12883690 -76620863 + AluSp SINE Alu 1 303 -10 209 304 0 14 chr17 12883739 12883808 -76620745 - L2 LINE L2 -203 3069 3002 2439 97 0 0 chr17 12884036 12884347 -76620206 - AluSq SINE Alu -2 311 1 2411 69 0 13 chr17 12885299 12885602 -76618951 - AluY SINE Alu -11 300 2 482 308 87 21 chr17 12885892 12886181 -76618372 + L2 LINE L2 2852 3159 -154 271 160 13 40 chr17 12886188 12886263 -76618290 + (TA)n Simple_repeat Simple_repeat 1 73 0 903 211 97 0 chr17 12886263 12886448 -76618105 - AluJo SINE Alu -23 289 87 180 111 0 0 chr17 12886529 12886556 -76617997 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 193 330 68 10 chr17 12886753 12886856 -76617697 - L2 LINE L2 -227 3045 2937 2090 256 56 42 chr17 12886856 12887590 -76616963 + HsTC2a DNA MER2_type 1 744 0 542 242 0 6 chr17 12888567 12888724 -76615829 + CT-rich Low_complexity Low_complexity 1 156 0 378 276 10 0 chr17 12889056 12889154 -76615399 - MIR SINE MIR -56 152 54 2135 142 0 0 chr17 12889710 12890019 -76614534 - AluSx SINE Alu -3 309 1 749 158 7 7 chr17 12890120 12890259 -76614294 + MIR SINE MIR 65 203 -59 273 200 0 17 chr17 12890311 12890371 -76614182 - L1MEd LINE L1 -4868 1251 1193 2095 157 19 50 chr17 12890403 12890555 -76613998 + MLT1A1 LTR MaLR 1 156 -209 2287 113 0 3 chr17 12890555 12890857 -76613696 + AluSx SINE Alu 1 301 -11 2095 157 19 50 chr17 12890857 12891081 -76613472 + MLT1A1 LTR MaLR 156 365 0 403 265 70 20 chr17 12891225 12891403 -76613150 + MLT1J2 LTR MaLR 1 154 -296 357 227 70 76 chr17 12891714 12891886 -76612667 + MLT1J LTR MaLR 325 495 -16 23 54 0 0 chr17 12891956 12891993 -76612560 + AT_rich Low_complexity Low_complexity 1 37 0 1013 83 0 0 chr17 12892195 12892316 -76612237 + AluSp SINE Alu 103 223 -90 1859 171 42 90 chr17 12892587 12892852 -76611701 - MLT1C LTR MaLR -32 435 200 2093 142 0 3 chr17 12892852 12893148 -76611405 - AluSx SINE Alu -17 295 1 1859 171 42 90 chr17 12893148 12893339 -76611214 - MLT1C LTR MaLR -267 200 1 216 289 0 0 chr17 12894274 12894326 -76610227 + MIR SINE MIR 88 139 -69 329 109 22 0 chr17 12894400 12894446 -76610107 - AluSp SINE Alu -135 168 122 1610 168 119 6 chr17 12895524 12895852 -76608701 + MLT1A1 LTR MaLR 1 365 0 1877 78 0 47 chr17 12895918 12896176 -76608377 + AluSg SINE Alu 1 246 -64 198 103 0 0 chr17 12896176 12896205 -76608348 + (A)n Simple_repeat Simple_repeat 1 29 0 398 242 60 1 chr17 12897079 12897198 -76607355 + MIR3 SINE MIR 72 200 -8 23 0 0 0 chr17 12897672 12897695 -76606858 + AT_rich Low_complexity Low_complexity 1 23 0 1757 211 96 19 chr17 12897716 12898185 -76606368 + MLT1D LTR MaLR 1 505 0 2328 186 9 9 chr17 12898474 12898894 -76605659 - LTR9B LTR ERV1 0 644 225 8309 109 161 28 chr17 12898897 12900394 -76604159 + pTR5 LTR ERV1 743 2438 0 760 231 28 28 chr17 12900399 12900611 -76603942 - LTR9B LTR ERV1 -426 218 7 2494 86 0 6 chr17 12901121 12901436 -76603117 - AluSq SINE Alu 0 313 1 311 320 25 8 chr17 12902413 12902535 -76602018 + MLT1J1 LTR MaLR 32 155 -291 368 261 117 18 chr17 12902589 12902700 -76601853 + MLT1I LTR MaLR 282 403 -6 497 309 44 58 chr17 12903884 12904363 -76600190 - L2 LINE L2 -38 3275 2804 2415 202 115 18 chr17 12904866 12904918 -76599635 - L1MA10 LINE L1 -7 6327 6281 2229 110 3 3 chr17 12904918 12905217 -76599336 + AluSx SINE Alu 1 299 -13 2415 202 115 18 chr17 12905217 12905763 -76598790 - L1MA10 LINE L1 -53 6281 5671 204 216 0 0 chr17 12906446 12906497 -76598056 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1311 181 83 28 chr17 12906524 12906812 -76597741 - MLT2B2 LTR ERVL -51 464 161 958 178 76 16 chr17 12906998 12907183 -76597370 - MLT2B2 LTR ERVL -319 196 1 252 294 12 24 chr17 12908164 12908249 -76596304 - MIR SINE MIR -102 106 23 550 186 0 0 chr17 12908407 12908504 -76596049 - MER53 DNA DNA -92 97 1 183 100 0 0 chr17 12909225 12909255 -76595298 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 1021 244 20 20 chr17 12909305 12909559 -76594994 + MIR SINE MIR 8 261 -1 282 257 0 14 chr17 12909701 12909771 -76594782 + MLT1L LTR MaLR 168 236 -379 505 294 113 5 chr17 12909856 12910077 -76594476 + MLT1L LTR MaLR 353 597 -18 1981 155 0 3 chr17 12910974 12911277 -76593276 + AluJb SINE Alu 1 302 -10 410 222 26 17 chr17 12911644 12911761 -76592792 - MIR SINE MIR -14 248 131 345 322 70 0 chr17 12911851 12911966 -76592587 - MIR SINE MIR -132 130 8 2278 102 0 28 chr17 12912642 12912964 -76591589 + AluSq SINE Alu 1 313 0 1178 218 45 37 chr17 12913920 12914300 -76590253 - LTR37A LTR ERV1 -2 424 42 24 32 0 0 chr17 12915891 12915922 -76588631 + AT_rich Low_complexity Low_complexity 1 31 0 2492 53 6 38 chr17 12916066 12916385 -76588168 + AluY SINE Alu 1 309 -2 3118 112 216 62 chr17 12917045 12917641 -76586912 - LTR12 LTR ERV1 0 688 1 2202 214 137 9 chr17 12918196 12918751 -76585802 - L1MD3 LINE L1 0 7995 7370 1061 150 6 12 chr17 12918912 12919085 -76585468 + FRAM SINE Alu 2 173 -3 198 0 0 0 chr17 12919841 12919863 -76584690 + (TC)n Simple_repeat Simple_repeat 1 22 0 2711 55 15 6 chr17 12919863 12920192 -76584361 - L1PA8 LINE L1 0 6172 5841 450 339 0 8 chr17 12920197 12920327 -76584226 - MIR SINE MIR -60 148 20 965 292 113 24 chr17 12922525 12923205 -76581348 - L1ME4a LINE L1 -41 6080 5328 2202 129 3 0 chr17 12923820 12924130 -76580423 - AluSx SINE Alu -1 311 1 322 260 128 25 chr17 12924495 12924691 -76579862 + L2 LINE L2 2141 2356 -958 2576 53 3 0 chr17 12925113 12925415 -76579138 - AluY SINE Alu -8 303 1 2301 101 7 7 chr17 12925675 12925981 -76578572 - AluSq SINE Alu -7 306 1 2312 97 3 0 chr17 12926718 12927017 -76577536 + AluSg SINE Alu 1 300 -10 1879 218 28 19 chr17 12927032 12927505 -76577048 + L1MEc LINE L1 40 516 -5880 886 207 73 17 chr17 12927618 12927797 -76576756 - AluJo SINE Alu -37 275 87 2230 108 3 25 chr17 12927820 12928135 -76576418 - AluSx SINE Alu -4 308 1 2456 181 40 11 chr17 12929017 12929546 -76575007 - MER74A LTR ERVL -12 546 3 1236 268 118 8 chr17 12931426 12931926 -76572627 - MLT1H1 LTR MaLR 0 555 1 325 195 35 13 chr17 12932559 12932672 -76571881 - MIR SINE MIR -61 147 70 2023 124 0 29 chr17 12932841 12933148 -76571405 - AluSx SINE Alu -14 298 1 211 367 27 27 chr17 12934139 12934289 -76570264 + L2 LINE L2 2919 3068 -204 44 0 0 0 chr17 12935816 12935860 -76568693 + AT_rich Low_complexity Low_complexity 1 44 0 441 346 33 5 chr17 12936118 12936320 -76568233 - MIR SINE MIR -34 228 20 306 291 240 11 chr17 12936773 12936948 -76567605 - MIR SINE MIR -45 217 3 749 223 63 6 chr17 12937090 12937265 -76567288 + MIR SINE MIR 66 250 -12 2418 89 0 0 chr17 12938501 12938804 -76565749 - AluSq SINE Alu -10 303 1 1853 154 48 34 chr17 12939090 12939448 -76565105 - L1MB3 LINE L1 -7 6176 5814 207 167 8 87 chr17 12939512 12939638 -76564915 + (TA)n Simple_repeat Simple_repeat 2 117 0 * 293 204 72 24 chr17 12939564 12939731 -76564822 + (CATAT)n Simple_repeat Simple_repeat 2 176 0 211 205 103 13 chr17 12939742 12939898 -76564655 + (CATAT)n Simple_repeat Simple_repeat 2 171 0 359 131 89 30 chr17 12940103 12940326 -76564227 + (CATAT)n Simple_repeat Simple_repeat 1 236 0 246 83 102 9 chr17 12940341 12940449 -76564104 + (CATAT)n Simple_repeat Simple_repeat 3 120 0 353 99 123 31 chr17 12940560 12940780 -76563773 + (CATAT)n Simple_repeat Simple_repeat 1 240 0 1734 25 5 0 chr17 12941288 12941488 -76563065 - L1PA4 LINE L1 -277 5878 5678 2157 56 8 8 chr17 12941488 12941750 -76562803 + L1PA4 LINE L1 5882 6147 -8 2554 47 7 0 chr17 12942570 12942866 -76561687 + AluSp SINE Alu 1 298 -15 384 200 0 38 chr17 12943152 12943232 -76561321 - L2 LINE L2 0 3313 3237 428 0 19 0 chr17 12943323 12943375 -76561178 + (GA)n Simple_repeat Simple_repeat 2 54 0 5539 281 163 12 chr17 12943427 12943516 -76561037 - L2 LINE L2 -116 3197 3123 1814 174 138 31 chr17 12943516 12943935 -76560618 - MLT1C LTR MaLR 0 467 4 5539 281 163 12 chr17 12943935 12946586 -76557967 - L2 LINE L2 -190 3123 28 2446 251 100 31 chr17 12948100 12948283 -76556270 + L2 LINE L2 2163 2332 -981 1768 264 58 36 chr17 12948283 12948813 -76555740 + MLT1F LTR MaLR 1 542 0 2446 251 100 31 chr17 12948813 12949672 -76554881 + L2 LINE L2 2332 3291 -22 2601 52 3 0 chr17 12949672 12949980 -76554573 - AluY SINE Alu -2 309 1 2446 251 100 31 chr17 12949980 12949996 -76554557 + L2 LINE L2 3291 3304 -9 583 259 99 53 chr17 12950057 12950432 -76554121 + L1MEc LINE L1 805 1196 -4923 7625 53 18 0 chr17 12950436 12951427 -76553126 - L1PA8 LINE L1 0 6172 5174 401 273 73 22 chr17 12951485 12951792 -76552761 + L1MEc LINE L1 1306 1627 -863 2313 84 0 7 chr17 12951982 12952281 -76552272 + AluSg SINE Alu 1 297 -13 482 279 52 96 chr17 12952401 12952556 -76551997 + L1MEc LINE L1 1985 2145 -3984 2607 143 35 21 chr17 12952556 12952754 -76551799 + Tigger2a DNA MER2_type 1 195 -2513 2115 116 10 0 chr17 12952754 12953048 -76551505 - AluY SINE Alu -14 297 1 2607 143 35 21 chr17 12953048 12953277 -76551276 + Tigger2a DNA MER2_type 195 434 0 482 279 52 96 chr17 12953277 12953650 -76550903 + L1MEc LINE L1 2145 2447 -3682 2248 121 0 0 chr17 12953650 12953955 -76550598 + AluSx SINE Alu 1 305 -7 482 279 52 96 chr17 12953955 12954074 -76550479 + L1MEc LINE L1 2447 2570 -3559 2124 128 0 3 chr17 12954553 12954842 -76549711 - AluSx SINE Alu -24 288 1 667 356 62 12 chr17 12955047 12955451 -76549102 - L2 LINE L2 -2803 511 88 2344 100 0 0 chr17 12957211 12957512 -76547041 + AluY SINE Alu 1 301 -10 2613 125 9 60 chr17 12957631 12958079 -76546474 - L1PA15 LINE L1 -1 6164 5740 2505 46 0 23 chr17 12959414 12959720 -76544833 + AluY SINE Alu 1 299 -12 306 0 0 0 chr17 12959720 12959754 -76544799 + (TA)n Simple_repeat Simple_repeat 2 35 0 315 205 145 24 chr17 12959884 12959967 -76544586 - MIR3 SINE MIR -49 159 67 494 225 0 29 chr17 12960691 12960829 -76543724 - L1ME4a LINE L1 -9 6112 5979 229 280 0 13 chr17 12961484 12961559 -76542994 - HAL1b LINE L1 -49 1299 1226 2292 90 0 20 chr17 12961559 12961859 -76542694 - AluSq SINE Alu -19 294 1 342 335 62 22 chr17 12961859 12962083 -76542470 - L1ME4a LINE L1 -146 5975 5743 2379 95 3 0 chr17 12962495 12962801 -76541752 - AluSx SINE Alu -5 307 1 360 0 0 0 chr17 12963415 12963455 -76541098 + (CA)n Simple_repeat Simple_repeat 1 40 0 243 122 0 0 chr17 12963455 12963504 -76541049 + (A)n Simple_repeat Simple_repeat 1 49 0 24 0 0 0 chr17 12963835 12963859 -76540694 + AT_rich Low_complexity Low_complexity 1 24 0 417 286 64 36 chr17 12963919 12964450 -76540103 - L1M4 LINE L1 -3005 3141 2596 362 243 56 36 chr17 12964908 12965125 -76539428 + MLT1I LTR MaLR 79 269 -140 847 330 119 38 chr17 12965319 12966285 -76538268 - L1 LINE L1 -1675 4471 3425 1849 174 29 66 chr17 12966810 12967292 -76537261 - MLT1C LTR MaLR 0 467 4 2275 91 0 14 chr17 12967407 12967704 -76536849 - AluSc SINE Alu -16 293 1 303 293 98 39 chr17 12968367 12968605 -76535948 - MIR3 SINE MIR -7 255 2 458 199 122 15 chr17 12968786 12968917 -76535636 + MER58C DNA MER1_type 69 213 -2 1397 203 39 36 chr17 12968970 12969334 -76535219 + MLT1A1 LTR MaLR 1 365 0 326 258 93 10 chr17 12969639 12969736 -76534817 + L2 LINE L2 3190 3294 -19 235 326 51 0 chr17 12969958 12970056 -76534497 + L2 LINE L2 3161 3263 -9 336 250 0 0 chr17 12970196 12970276 -76534277 + MER58 DNA MER1_type 205 284 -2136 2146 118 3 7 chr17 12970851 12971157 -76533396 - AluSg SINE Alu -5 305 1 2771 10 0 0 chr17 12971452 12971759 -76532794 + AluYa5 SINE Alu 1 307 -4 376 309 82 60 chr17 12973064 12973297 -76531256 - L1MC4a LINE L1 -1888 5920 5683 231 36 0 0 chr17 12973539 12973567 -76530986 + (TCCA)n Simple_repeat Simple_repeat 1 28 0 190 280 13 53 chr17 12973574 12973649 -76530904 - L2 LINE L2 0 3272 3201 365 299 42 60 chr17 12973716 12973883 -76530670 + MIR3 SINE MIR 8 171 -37 544 243 71 136 chr17 12973888 12974342 -76530211 + Charlie8 DNA MER1_type 16 443 -1974 2195 110 10 3 chr17 12975495 12975803 -76528750 - AluSx SINE Alu -2 310 1 189 301 38 60 chr17 12975854 12975987 -76528566 + L2 LINE L2 2963 3092 -180 644 304 42 17 chr17 12976580 12976817 -76527736 + MIR SINE MIR 20 262 0 284 231 22 66 chr17 12978632 12978723 -76525830 - MIR SINE MIR -70 192 106 2978 61 80 0 chr17 12978887 12979256 -76525297 + MLT2A1 LTR ERVL 1 408 -36 216 0 0 0 chr17 12979256 12979280 -76525273 + (TA)n Simple_repeat Simple_repeat 2 25 0 2978 61 80 0 chr17 12979280 12979321 -76525232 + MLT2A1 LTR ERVL 408 444 0 1022 68 0 0 chr17 12979421 12979553 -76525000 + AluY SINE Alu 169 300 -11 628 129 14 86 chr17 12980134 12980184 -76524369 - L1MB3 LINE L1 0 6183 6131 2251 62 13 13 chr17 12980184 12980489 -76524064 - AluY SINE Alu -6 305 1 628 129 14 86 chr17 12980489 12980578 -76523975 - L1MB3 LINE L1 -52 6131 6054 1626 179 15 57 chr17 12980632 12981039 -76523514 - MLT1B LTR MaLR 0 390 1 400 267 30 0 chr17 12981818 12981953 -76522600 - L1MC4a LINE L1 -1902 5906 5768 334 233 125 42 chr17 12981968 12982088 -76522465 + L2 LINE L2 3171 3300 -13 361 231 49 140 chr17 12982134 12982377 -76522176 - L1MC4a LINE L1 -2179 5629 5409 269 286 78 55 chr17 12982585 12983112 -76521441 - L1MC4a LINE L1 -982 5164 4626 376 345 43 17 chr17 12983221 12983456 -76521097 + L1M4 LINE L1 4853 5093 -1053 7146 32 6 1 chr17 12983478 12984375 -76520178 - L1PA3 LINE L1 -1 6154 5254 716 315 102 68 chr17 12984492 12985384 -76519169 - L1MC4a LINE L1 -1771 4375 3447 1120 101 11 6 chr17 12985439 12985617 -76518936 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 305 262 19 37 chr17 12985624 12985731 -76518822 - L1M4 LINE L1 -1726 4420 4316 202 246 31 15 chr17 12985738 12985803 -76518750 + CT-rich Low_complexity Low_complexity 1 66 0 304 151 0 27 chr17 12985814 12985887 -76518666 + CT-rich Low_complexity Low_complexity 2 72 0 912 218 11 0 chr17 12985887 12986061 -76518492 - AluJb SINE Alu 0 312 137 270 0 0 0 chr17 12986481 12986511 -76518042 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1931 149 31 0 chr17 12986514 12986802 -76517751 - AluSx SINE Alu -15 297 1 23 0 0 0 chr17 12986943 12986966 -76517587 + AT_rich Low_complexity Low_complexity 1 23 0 15885 198 19 28 chr17 12987124 12992962 -76511591 - L1PA16 LINE L1 -6 6811 1026 31 26 0 0 chr17 12993462 12993500 -76511053 + AT_rich Low_complexity Low_complexity 1 38 0 258 276 148 49 chr17 12994226 12994592 -76509961 - MLT1J LTR MaLR 0 511 110 402 301 77 64 chr17 12996044 12996432 -76508121 - MLT1K LTR MaLR -9 579 187 719 199 31 82 chr17 12996564 12996760 -76507793 + MER5A DNA MER1_type 1 186 -3 1902 162 0 26 chr17 12997509 12997805 -76506748 + AluJo SINE Alu 1 271 -41 180 0 0 0 chr17 12997805 12997825 -76506728 + (CCAA)n Simple_repeat Simple_repeat 4 23 0 1902 162 0 26 chr17 12997825 12997866 -76506687 + AluJo SINE Alu 271 312 0 602 284 101 0 chr17 12998376 12998594 -76505959 + MIR SINE MIR 9 248 -14 199 351 45 27 chr17 12998676 12998787 -76505766 + L2 LINE L2 3142 3254 -18 771 138 119 0 chr17 12999038 12999197 -76505356 + L1MA6 LINE L1 6067 6244 -56 814 181 36 0 chr17 12999217 12999355 -76505198 + FRAM SINE Alu 1 142 -34 322 130 0 0 chr17 12999375 12999429 -76505124 + L1MA6 LINE L1 6247 6300 0 2410 75 0 7 chr17 12999629 12999936 -76504617 - AluSc SINE Alu -4 305 1 1114 253 93 30 chr17 13000325 13000646 -76503907 - MLT1C LTR MaLR 0 467 109 1737 151 0 15 chr17 13000646 13000917 -76503636 + AluJo SINE Alu 35 301 -11 1114 253 93 30 chr17 13000917 13001034 -76503519 - MLT1C LTR MaLR -358 109 1 1952 106 16 0 chr17 13001350 13001634 -76502919 + AluY SINE Alu 26 313 0 504 228 164 32 chr17 13001742 13001931 -76502622 - MLT1K LTR MaLR -2 586 373 528 157 25 41 chr17 13001943 13002064 -76502489 - L1ME3 LINE L1 -168 6789 6671 4410 260 91 54 chr17 13002130 13002440 -76502113 - L1ME3 LINE L1 -301 6664 6367 1625 172 14 21 chr17 13002440 13002760 -76501793 - AluJb SINE Alu 0 318 1 4410 260 91 54 chr17 13002760 13003909 -76500644 - L1ME3 LINE L1 -598 6367 5262 2171 135 67 0 chr17 13003909 13004250 -76500303 - THE1B LTR MaLR 0 364 1 4410 260 91 54 chr17 13004250 13006023 -76498530 - L1ME3 LINE L1 -1703 5262 3308 391 303 112 26 chr17 13006287 13006821 -76497732 - L1ME3 LINE L1 -4532 2409 1926 386 336 13 7 chr17 13006920 13007069 -76497484 - L1ME3 LINE L1 -5126 1805 1656 276 313 22 11 chr17 13007075 13007257 -76497296 - L1ME3 LINE L1 -4961 1462 1279 313 117 48 179 chr17 13008457 13008602 -76495951 + MER103 DNA DNA 23 148 -18 13406 178 55 10 chr17 13009013 13015583 -76488970 - L1PB1 LINE L1 0 6867 6 197 178 22 0 chr17 13015976 13016021 -76488532 + (TG)n Simple_repeat Simple_repeat 2 47 0 184 269 129 57 chr17 13017310 13017428 -76487125 + L2 LINE L2 2844 2983 -289 2479 89 0 0 chr17 13017428 13017730 -76486823 - AluSg SINE Alu -8 302 1 184 269 129 57 chr17 13017730 13017804 -76486749 + L2 LINE L2 2983 3050 -222 351 0 0 0 chr17 13017905 13017944 -76486609 + (TG)n Simple_repeat Simple_repeat 2 40 0 204 228 44 125 chr17 13018351 13018487 -76486066 - MIR SINE MIR -71 191 67 1776 174 0 17 chr17 13018571 13018865 -76485688 - AluJb SINE Alu -23 289 1 927 186 23 17 chr17 13018865 13019042 -76485511 - MLT1B LTR MaLR -212 178 1 23 33 0 0 chr17 13020040 13020070 -76484483 + AT_rich Low_complexity Low_complexity 1 30 0 765 247 74 23 chr17 13020822 13021159 -76483394 + LTR33A LTR ERVL 137 521 -2 198 0 0 0 chr17 13022193 13022215 -76482338 + (TC)n Simple_repeat Simple_repeat 2 23 0 2328 92 10 0 chr17 13022215 13022509 -76482044 - AluSx SINE Alu -15 297 1 1957 249 30 23 chr17 13022557 13023331 -76481222 - L1MEc LINE L1 -3324 2891 1877 360 346 39 0 chr17 13024179 13024335 -76480218 + MLT1K LTR MaLR 124 285 -303 556 240 36 77 chr17 13024387 13024583 -76479970 + MLT1K LTR MaLR 399 586 -2 363 285 119 52 chr17 13024719 13024926 -76479627 + L1ME LINE L1 5322 5514 -607 688 233 0 23 chr17 13024926 13025059 -76479494 - FLAM_A SINE Alu -3 130 1 363 285 119 52 chr17 13025059 13025255 -76479298 + L1ME LINE L1 5514 5752 -369 22 35 0 0 chr17 13025361 13025390 -76479163 + AT_rich Low_complexity Low_complexity 1 29 0 2176 78 3 7 chr17 13025524 13025850 -76478703 + AluY SINE Alu 1 325 0 2402 89 3 0 chr17 13025852 13026156 -76478397 + AluY SINE Alu 1 305 -6 201 313 31 0 chr17 13026223 13026287 -76478266 - L2 LINE L2 -212 3060 2995 984 250 87 52 chr17 13027345 13027749 -76476804 - MLT1J1 LTR MaLR -8 438 21 201 300 50 0 chr17 13027774 13027834 -76476719 + MER91C DNA MER1_type 47 109 -31 252 245 213 38 chr17 13028410 13028573 -76475980 - MIR SINE MIR -67 141 13 258 283 0 19 chr17 13028863 13028952 -76475601 - MER69 DNA AcHobo -1753 773 685 2407 71 7 13 chr17 13028952 13029260 -76475293 + AluY SINE Alu 1 306 -5 258 283 0 19 chr17 13029260 13029276 -76475277 - MER69 DNA AcHobo -1841 685 670 243 188 0 0 chr17 13029281 13029345 -76475208 + L1MC4 LINE L1 6640 6703 -1339 245 227 0 27 chr17 13029345 13029420 -76475133 + (TATATG)n Simple_repeat Simple_repeat 5 77 0 246 227 23 23 chr17 13029422 13029510 -76475043 - L1MC4 LINE L1 -1340 6702 6615 * 256 216 23 23 chr17 13029432 13029520 -76475033 + L1MC4 LINE L1 6615 6702 -1340 528 246 0 0 chr17 13029530 13029668 -76474885 + (TA)n Simple_repeat Simple_repeat 1 138 0 1881 280 115 0 chr17 13029672 13030279 -76474274 - MER69 DNA AcHobo -1845 681 5 319 264 230 13 chr17 13030536 13030775 -76473778 + LTR33A LTR ERVL 226 516 -7 2393 89 0 0 chr17 13030982 13031275 -76473278 + AluSc SINE Alu 1 293 -16 436 305 114 15 chr17 13031971 13032233 -76472320 + L1ME4a LINE L1 4142 4429 -1717 438 285 84 9 chr17 13032875 13033089 -76471464 + L1ME4a LINE L1 5653 5882 -239 2256 133 133 13 chr17 13033318 13033700 -76470853 - MSTA LTR MaLR 0 428 1 441 254 189 0 chr17 13033936 13034058 -76470495 - MER5A DNA MER1_type -6 183 39 922 236 151 48 chr17 13034769 13035167 -76469386 - MLT1J2 LTR MaLR 0 450 12 1326 138 0 5 chr17 13035495 13035690 -76468863 - L1PB4 LINE L1 -9 6147 5954 466 0 0 0 chr17 13035929 13035981 -76468572 - MADE1 DNA Mariner -27 53 2 280 196 71 0 chr17 13036133 13036189 -76468364 - L2 LINE L2 -2 3311 3252 207 0 0 0 chr17 13036735 13036758 -76467795 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 447 106 0 0 chr17 13038361 13038427 -76466126 + (TG)n Simple_repeat Simple_repeat 2 67 0 276 53 0 0 chr17 13039616 13039654 -76464899 + (CA)n Simple_repeat Simple_repeat 2 39 0 2163 124 3 0 chr17 13040131 13040437 -76464116 - AluSx SINE Alu -5 307 1 5237 134 9 31 chr17 13040941 13041529 -76463024 + MER54B LTR ERVL 1 568 -225 2141 122 10 7 chr17 13041529 13041832 -76462721 - AluSq SINE Alu -9 304 1 5237 134 9 31 chr17 13041832 13042051 -76462502 + MER54B LTR ERVL 568 790 -3 1936 148 184 11 chr17 13042239 13042424 -76462129 - MSTA LTR MaLR 0 428 276 525 16 0 0 chr17 13042424 13042486 -76462067 + (GA)n Simple_repeat Simple_repeat 1 62 0 1936 148 184 11 chr17 13042486 13042664 -76461889 - MSTA LTR MaLR -152 276 2 449 236 3 5 chr17 13042761 13042869 -76461684 - MLT1H LTR MaLR 0 549 292 256 286 0 24 chr17 13043058 13043142 -76461411 - MLT1H LTR MaLR -375 174 93 * 583 183 29 10 chr17 13043130 13043234 -76461319 - MER81 DNA DNA -8 106 1 234 346 56 9 chr17 13043234 13043341 -76461212 - MLT1H LTR MaLR -437 112 1 300 53 0 0 chr17 13044921 13044959 -76459594 + (CA)n Simple_repeat Simple_repeat 2 39 0 1825 161 0 16 chr17 13045031 13045390 -76459163 - AluJo SINE Alu 0 354 1 1306 169 57 33 chr17 13045727 13046028 -76458525 + L1MA9 LINE L1 5998 6305 -7 619 133 40 77 chr17 13046013 13046176 -76458377 - L1MB8 LINE L1 -1 6183 6030 * 21 71 0 0 chr17 13046276 13046318 -76458235 + AT_rich Low_complexity Low_complexity 1 42 0 1833 128 6 56 chr17 13046608 13046927 -76457626 - AluSx SINE Alu -9 303 1 282 343 130 4 chr17 13047796 13048050 -76456503 + L2 LINE L2 3017 3302 -11 229 140 105 35 chr17 13048062 13048077 -76456476 - MER46A DNA MER2_type -79 157 139 1444 156 90 11 chr17 13048077 13048406 -76456147 + Tigger4(Zombi) DNA MER2_type 1 2731 0 219 139 0 0 chr17 13048414 13048450 -76456103 + (TG)n Simple_repeat Simple_repeat 2 37 0 200 316 150 28 chr17 13048507 13048760 -76455793 - L2 LINE L2 -640 2674 2391 400 238 0 0 chr17 13048760 13048840 -76455713 - Tigger7 DNA MER2_type -1 2586 2507 2264 92 0 0 chr17 13048880 13049212 -76455341 - AluSx SINE Alu 0 332 1 986 185 0 0 chr17 13049213 13049370 -76455183 - Tigger7 DNA MER2_type -342 391 235 8621 128 16 10 chr17 13050069 13051363 -76453190 - HSMAR2 DNA Mariner 0 1302 2 346 314 93 6 chr17 13051476 13051648 -76452905 - L1MEc LINE L1 -2279 3936 3750 23 33 0 0 chr17 13051650 13051680 -76452873 + AT_rich Low_complexity Low_complexity 1 30 0 430 303 92 40 chr17 13051996 13053112 -76451441 - L1MEc LINE L1 -2948 3267 2133 641 296 73 74 chr17 13053722 13054424 -76450129 + L1MEd LINE L1 328 1028 -5091 243 125 0 0 chr17 13054498 13054538 -76450015 + (GA)n Simple_repeat Simple_repeat 1 40 0 219 57 0 75 chr17 13054546 13054599 -76449954 + (AGGGGG)n Simple_repeat Simple_repeat 1 49 0 263 181 160 43 chr17 13054917 13055011 -76449542 - MLT1J1 LTR MaLR -284 162 58 2746 138 41 10 chr17 13055218 13055428 -76449125 - MER61B LTR ERV1 0 425 223 303 28 0 0 chr17 13055428 13055464 -76449089 + (CAGGC)n Simple_repeat Simple_repeat 1 36 0 2746 138 41 10 chr17 13055464 13055665 -76448888 - MER61B LTR ERV1 -202 223 1 933 216 9 105 chr17 13055665 13055710 -76448843 - L1ME3A LINE L1 -25 6145 6097 3387 130 16 6 chr17 13055710 13056216 -76448337 + MER75 DNA T2_type 1 511 -3 933 216 9 105 chr17 13056216 13056408 -76448145 - L1ME3A LINE L1 -73 6097 5945 2578 59 0 0 chr17 13056408 13056711 -76447842 - AluY SINE Alu -8 303 1 933 216 9 105 chr17 13056711 13056796 -76447757 - L1ME3A LINE L1 -225 5945 5853 783 176 0 0 chr17 13056844 13056975 -76447578 - MLT2B1 LTR ERVL -389 131 1 190 222 0 0 chr17 13057116 13057152 -76447401 - L2 LINE L2 -4 3309 3274 336 319 14 28 chr17 13057230 13057371 -76447182 + L2 LINE L2 2932 3070 -202 237 214 0 0 chr17 13057466 13057508 -76447045 + L2 LINE L2 3219 3260 -12 1325 282 97 27 chr17 13057508 13058293 -76446260 - L1 LINE L1 -1814 4332 3487 4258 149 42 76 chr17 13058294 13058887 -76445666 + MER4D LTR ERV1 1 308 -356 2610 30 7 3 chr17 13058887 13059190 -76445363 - AluY SINE Alu -7 304 1 4258 149 42 76 chr17 13059190 13059536 -76445017 + MER4D LTR ERV1 308 664 0 276 249 63 53 chr17 13059673 13059862 -76444691 - L1 LINE L1 -2961 3185 2995 4373 134 11 19 chr17 13060154 13060290 -76444263 - MER41B LTR ERV1 0 635 499 2429 69 6 31 chr17 13060290 13060609 -76443944 + AluY SINE Alu 1 311 0 4373 134 11 19 chr17 13060609 13061112 -76443441 - MER41B LTR ERV1 -136 499 1 300 294 77 42 chr17 13061181 13061324 -76443229 - L2 LINE L2 -1 3271 3124 208 185 0 154 chr17 13061452 13061517 -76443036 + MIR SINE MIR 86 140 -122 619 208 163 30 chr17 13061578 13061777 -76442776 - MER2 DNA MER2_type 0 345 120 1624 169 38 91 chr17 13061777 13061846 -76442707 - THE1C LTR MaLR 0 375 304 2282 76 0 9 chr17 13061846 13062180 -76442373 + AluY SINE Alu 2 282 -29 1624 169 38 91 chr17 13062180 13062298 -76442255 - THE1C LTR MaLR -71 304 181 3708 98 226 2 chr17 13062298 13062860 -76441693 + LTR12 LTR ERV1 1 688 0 1624 169 38 91 chr17 13062860 13063066 -76441487 - THE1C LTR MaLR -194 181 1 678 144 10 0 chr17 13063073 13063177 -76441376 - MER2 DNA MER2_type -240 105 1 21 71 0 0 chr17 13063428 13063470 -76441083 + AT_rich Low_complexity Low_complexity 1 42 0 198 71 0 0 chr17 13063843 13063871 -76440682 + (TG)n Simple_repeat Simple_repeat 1 28 0 360 248 79 0 chr17 13064849 13064950 -76439603 - MIR SINE MIR -117 145 37 435 294 23 34 chr17 13065006 13065183 -76439370 - L2 LINE L2 -7 3306 3132 615 325 108 7 chr17 13065282 13065577 -76438976 - LTR16C LTR ERVL 0 491 167 3596 251 207 25 chr17 13065810 13067357 -76437196 - L2 LINE L2 -257 3056 1207 776 278 98 68 chr17 13067708 13068011 -76436542 + LTR16A LTR ERVL 79 396 -61 2323 104 0 13 chr17 13068011 13068319 -76436234 - AluSx SINE Alu -8 304 1 776 278 98 68 chr17 13068319 13068382 -76436171 + LTR16A LTR ERVL 396 456 -1 613 277 141 31 chr17 13068382 13068837 -76435716 + L1ME4a LINE L1 5614 6118 -3 340 252 32 16 chr17 13069301 13069424 -76435129 + MER113 DNA MER1_type? 4 128 -393 1010 128 45 0 chr17 13070159 13070315 -76434238 - AluSq SINE Alu -17 296 134 1919 151 10 16 chr17 13070318 13070630 -76433923 - AluSq SINE Alu -3 310 1 2669 61 15 6 chr17 13071381 13071710 -76432843 + L1PA8 LINE L1 5841 6172 0 198 0 0 0 chr17 13071710 13071732 -76432821 + (GA)n Simple_repeat Simple_repeat 1 22 0 604 281 6 18 chr17 13072494 13072661 -76431892 - FRAM SINE Alu 0 166 2 2414 62 3 0 chr17 13124342 13124630 -76379923 + AluY SINE Alu 13 301 -10 21 36 0 0 chr17 13124850 13124878 -76379675 + AT_rich Low_complexity Low_complexity 1 28 0 2135 82 37 10 chr17 13125717 13126011 -76378542 + AluSg1 SINE Alu 1 302 -7 2078 112 3 3 chr17 13126021 13126306 -76378247 + AluSp SINE Alu 1 285 -28 2149 110 4 0 chr17 13127522 13127850 -76376703 - AluSc SINE Alu 0 329 1 403 264 84 50 chr17 13127919 13128320 -76376233 + MLT1G1 LTR MaLR 39 482 -113 1633 214 97 7 chr17 13128327 13128748 -76375805 - MLT1C LTR MaLR -8 459 1 302 277 50 25 chr17 13128748 13128864 -76375689 + MLT1G1 LTR MaLR 477 595 0 247 263 20 20 chr17 13130333 13130432 -76374121 - LTR16A1 LTR ERVL 0 457 359 220 293 85 0 chr17 13130518 13130600 -76373953 + MIR SINE MIR 20 108 -100 802 269 81 27 chr17 13131186 13131484 -76373069 - L2 LINE L2 -1 3312 2999 423 0 0 0 chr17 13131500 13131547 -76373006 + (TG)n Simple_repeat Simple_repeat 1 47 0 837 205 54 0 chr17 13131653 13131819 -76372734 + MER5B DNA MER1_type 1 175 -3 1824 221 7 38 chr17 13131853 13132214 -76372339 + MLT2D LTR ERVL 3 351 -63 2209 116 3 0 chr17 13132214 13132515 -76372038 + AluSg SINE Alu 1 302 -8 1824 221 7 38 chr17 13132515 13132578 -76371975 + MLT2D LTR ERVL 351 414 0 494 276 71 34 chr17 13132578 13132653 -76371900 - L2 LINE L2 -569 2745 2674 1694 174 111 38 chr17 13132653 13133077 -76371476 + MSTB2 LTR MaLR 1 455 -2 494 276 71 34 chr17 13133077 13133240 -76371313 - L2 LINE L2 -640 2674 2498 1694 188 79 9 chr17 13134109 13134450 -76370103 + MLT1A1 LTR MaLR 1 365 0 256 265 44 0 chr17 13134608 13134676 -76369877 - L2 LINE L2 -7 3265 3195 328 169 12 12 chr17 13135067 13135150 -76369403 + (TA)n Simple_repeat Simple_repeat 1 83 0 1688 174 51 21 chr17 13135193 13135527 -76369026 + MER2 DNA MER2_type 1 344 0 35 54 0 0 chr17 13135616 13135672 -76368881 + AT_rich Low_complexity Low_complexity 1 56 0 2257 70 6 57 chr17 13136144 13136460 -76368093 + AluY SINE Alu 1 300 -11 492 332 79 30 chr17 13136497 13137102 -76367451 + L1M4 LINE L1 2765 3399 -2747 24 0 0 0 chr17 13137446 13137470 -76367083 + AT_rich Low_complexity Low_complexity 1 24 0 233 308 43 26 chr17 13138454 13138571 -76365982 - L2 LINE L2 -1 3271 3153 430 113 127 0 chr17 13139013 13139084 -76365469 + MADE1 DNA Mariner 1 80 0 2377 70 3 10 chr17 13139770 13140069 -76364484 - AluY SINE Alu -14 297 1 1557 106 0 5 chr17 13140098 13140305 -76364248 + AluSg/x SINE Alu 92 297 -15 475 286 16 81 chr17 13140305 13140405 -76364148 + MER5A DNA MER1_type 17 122 -67 1989 146 3 0 chr17 13140405 13140699 -76363854 + AluSx SINE Alu 1 295 -17 2269 72 23 20 chr17 13140699 13141003 -76363550 + AluY SINE Alu 1 305 -6 475 286 16 81 chr17 13141003 13141086 -76363467 + MER5A DNA MER1_type 120 189 0 414 283 0 0 chr17 13142435 13142594 -76361959 + (TG)n Simple_repeat Simple_repeat 1 159 0 2166 107 9 28 chr17 13143490 13143807 -76360746 - AluSx SINE Alu -1 311 1 2091 83 38 10 chr17 13144489 13144778 -76359775 + AluSg1 SINE Alu 1 297 -12 2466 84 3 3 chr17 13144788 13145096 -76359457 + AluSp SINE Alu 1 308 -5 2453 191 62 28 chr17 13145098 13145392 -76359161 - L1MA9 LINE L1 -38 6274 5991 2020 140 0 10 chr17 13145392 13145700 -76358853 - AluSx SINE Alu -7 305 1 2453 191 62 28 chr17 13145700 13146003 -76358550 - L1MA9 LINE L1 -321 5991 5657 1798 226 108 10 chr17 13146167 13146650 -76357903 + MER74A LTR ERVL 1 530 -28 21 0 0 0 chr17 13146858 13146879 -76357674 + AT_rich Low_complexity Low_complexity 1 21 0 2266 102 13 3 chr17 13146884 13147187 -76357366 + AluSg SINE Alu 1 306 -4 1274 103 6 0 chr17 13147988 13148153 -76356400 - AluSq SINE Alu -14 299 134 2238 113 0 13 chr17 13148153 13148463 -76356090 - AluSx SINE Alu -6 306 1 2016 88 4 0 chr17 13148463 13148735 -76355818 - L1PB1 LINE L1 -59 6092 5820 984 202 17 17 chr17 13148918 13149156 -76355397 - MER74A LTR ERVL -149 409 172 354 245 11 21 chr17 13149652 13149746 -76354807 + MER5B DNA MER1_type 1 93 -85 1701 186 21 53 chr17 13150844 13151067 -76353486 - MLT1A1 LTR MaLR 0 365 157 2141 138 0 7 chr17 13151067 13151365 -76353188 - AluSx SINE Alu -16 296 1 1701 186 21 53 chr17 13151365 13151518 -76353035 - MLT1A1 LTR MaLR -208 157 1 298 294 114 27 chr17 13151595 13151779 -76352774 - MIR SINE MIR -12 250 51 779 328 91 11 chr17 13151915 13152445 -76352108 - L2 LINE L2 -4 3309 2737 841 202 32 128 chr17 13152455 13152526 -76352027 - L1ME1 LINE L1 -5 6161 6085 2412 165 34 0 chr17 13152526 13152938 -76351615 - MSTB LTR MaLR 0 426 1 841 202 32 128 chr17 13152938 13153178 -76351375 - L1ME1 LINE L1 -81 6085 5880 * 2498 235 71 40 chr17 13153162 13154134 -76350419 - L1M4 LINE L1 -2107 4039 3038 1307 230 122 68 chr17 13154134 13154211 -76350342 - L1MEc LINE L1 -5831 565 494 2362 78 3 0 chr17 13154211 13154506 -76350047 + AluY SINE Alu 1 296 -15 1307 230 122 68 chr17 13154506 13154762 -76349791 - L1MEc LINE L1 -5902 494 196 2453 79 3 0 chr17 13154762 13155067 -76349486 + AluSp SINE Alu 1 306 -7 1307 230 122 68 chr17 13155067 13155214 -76349339 - L1MEc LINE L1 -6200 196 58 906 284 95 31 chr17 13155245 13155886 -76348667 - L2 LINE L2 -568 2746 2065 221 297 99 0 chr17 13155939 13156050 -76348503 + L2 LINE L2 3116 3237 -35 339 25 0 0 chr17 13156058 13156098 -76348455 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 183 152 0 0 chr17 13157846 13157892 -76346661 + (CA)n Simple_repeat Simple_repeat 1 46 0 1710 212 3 54 chr17 13158673 13159064 -76345489 - MLT1A2 LTR MaLR 0 374 4 393 286 143 60 chr17 13159167 13159600 -76344953 + L2 LINE L2 2841 3309 -4 216 256 35 58 chr17 13160252 13160338 -76344215 - L2 LINE L2 -3 3269 3186 1641 163 14 3 chr17 13161309 13161603 -76342950 + L1MC1 LINE L1 6037 6333 0 1498 160 113 35 chr17 13161827 13162145 -76342408 - MER2 DNA MER2_type 0 344 2 2134 111 13 7 chr17 13162770 13163076 -76341477 - AluSg SINE Alu -2 308 1 291 28 0 0 chr17 13163078 13163114 -76341439 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 850 164 8 0 chr17 13163130 13163264 -76341289 - FRAM SINE Alu -41 135 1 238 284 80 23 chr17 13163375 13163463 -76341090 - MIR SINE MIR -147 115 23 471 292 32 43 chr17 13164496 13164681 -76339872 + LTR33 LTR ERVL 1 183 -338 2528 48 0 7 chr17 13164832 13165126 -76339427 - AluY SINE Alu -14 297 6 224 216 54 68 chr17 13166620 13166694 -76337859 - L2 LINE L2 -5 3308 3236 2548 50 0 0 chr17 13168006 13168304 -76336249 + AluY SINE Alu 1 298 -13 1848 113 0 0 chr17 13168405 13168691 -76335862 - AluSx SINE Alu 0 321 36 1927 182 25 4 chr17 13169689 13170148 -76334405 + MLT2B1 LTR ERVL 2 515 0 2179 179 47 7 chr17 13170190 13170593 -76333960 + MSTB1 LTR MaLR 1 419 -13 294 247 118 0 chr17 13170604 13170689 -76333864 - MIR SINE MIR -99 163 69 2112 107 0 0 chr17 13170761 13171041 -76333512 + AluSx SINE Alu 1 280 -32 334 256 22 11 chr17 13171173 13171263 -76333290 - MIR SINE MIR -167 95 5 195 232 0 0 chr17 13171669 13171725 -76332828 + (TA)n Simple_repeat Simple_repeat 1 56 0 309 310 9 18 chr17 13171796 13171909 -76332644 - MIR3 SINE MIR -3 205 94 308 268 52 88 chr17 13172146 13172340 -76332213 + MIR SINE MIR 76 262 0 570 264 92 0 chr17 13173060 13173223 -76331330 - MIR SINE MIR -5 257 80 4116 120 20 16 chr17 13174343 13174984 -76329569 - LTR9B LTR ERV1 0 644 1 213 94 0 0 chr17 13175040 13175072 -76329481 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4951 143 39 1 chr17 13176238 13177118 -76327435 + L1 LINE L1 4125 5037 -1109 493 7 119 34 chr17 13177140 13177590 -76326963 + (TA)n Simple_repeat Simple_repeat 1 488 0 386 140 53 12 chr17 13177590 13177761 -76326792 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 419 204 57 18 chr17 13177776 13178113 -76326440 + (CATAT)n Simple_repeat Simple_repeat 1 350 0 188 127 66 60 chr17 13178126 13178292 -76326261 + (CATAT)n Simple_repeat Simple_repeat 4 170 0 286 125 64 64 chr17 13178306 13178591 -76325962 + (CATAT)n Simple_repeat Simple_repeat 1 285 0 226 106 56 56 chr17 13178594 13178773 -76325780 + (TA)n Simple_repeat Simple_repeat 1 179 0 * 262 125 14 14 chr17 13178739 13178811 -76325742 + (TAA)n Simple_repeat Simple_repeat 3 74 0 2308 89 52 3 chr17 13178823 13179322 -76325231 - L1P2 LINE L1 -553 5601 5062 2884 53 8 11 chr17 13179322 13179684 -76324869 + L1PA8 LINE L1 5792 6165 -7 303 331 57 62 chr17 13179689 13180220 -76324333 + L1M4 LINE L1 3759 4286 -1860 355 269 11 0 chr17 13180285 13180378 -76324175 - MIR SINE MIR -2 260 167 565 235 136 4 chr17 13180463 13180646 -76323907 + MIR SINE MIR 58 262 0 22 0 0 0 chr17 13180754 13180776 -76323777 + AT_rich Low_complexity Low_complexity 1 22 0 3415 170 59 12 chr17 13180780 13181606 -76322947 - L1MC1 LINE L1 -346 5987 5122 684 202 62 28 chr17 13181615 13181793 -76322760 + MER21B LTR ERV1 626 809 -54 8311 220 46 41 chr17 13181825 13184659 -76319894 - L1M4c LINE L1 -1725 4245 1382 180 0 0 0 chr17 13184660 13184680 -76319873 + (T)n Simple_repeat Simple_repeat 1 20 0 307 100 0 0 chr17 13184680 13184720 -76319833 - AluY SINE Alu -196 105 66 43135 30 21 1 chr17 13184735 13190764 -76313789 - L1PA2 LINE L1 -1 6154 3 3457 279 68 17 chr17 13190770 13191186 -76313367 - L1M4c LINE L1 -4641 1250 856 249 33 0 0 chr17 13191186 13191216 -76313337 + (TC)n Simple_repeat Simple_repeat 1 30 0 3457 279 68 17 chr17 13191216 13192642 -76311911 - L1M4c LINE L1 -5035 856 7 647 282 17 4 chr17 13192639 13192880 -76311673 - L1M4 LINE L1 -1762 4384 4141 * 311 311 40 128 chr17 13193288 13193818 -76310735 - L3 LINE CR1 -2 1575 1093 340 250 135 10 chr17 13194384 13194488 -76310065 - MIR3 SINE MIR -4 204 88 231 36 0 0 chr17 13194885 13194913 -76309640 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 442 221 64 50 chr17 13195163 13195303 -76309250 + L1MC4a LINE L1 5622 5763 -2045 258 264 14 14 chr17 13195402 13195474 -76309079 + CT-rich Low_complexity Low_complexity 1 72 0 24 0 0 0 chr17 13195525 13195549 -76309004 + AT_rich Low_complexity Low_complexity 1 24 0 1220 255 153 98 chr17 13195716 13196120 -76308433 - L1MC4 LINE L1 -127 7681 7301 1890 194 0 44 chr17 13196120 13196527 -76308026 + MLT1B LTR MaLR 1 389 -1 1220 255 153 98 chr17 13196527 13197475 -76307078 - L1MC4 LINE L1 -507 7301 6275 330 274 61 71 chr17 13197551 13197763 -76306790 + L1MC4a LINE L1 5851 6060 -1748 257 153 0 17 chr17 13198316 13198375 -76306178 + CT-rich Low_complexity Low_complexity 1 58 0 990 203 54 56 chr17 13198632 13198994 -76305559 + MSTB2 LTR MaLR 3 447 -10 180 77 0 0 chr17 13199009 13199035 -76305518 + (TG)n Simple_repeat Simple_repeat 1 26 0 6118 139 21 26 chr17 13199403 13199836 -76304717 - L1MC1 LINE L1 0 6333 5900 2234 100 0 20 chr17 13199836 13200137 -76304416 - AluSx SINE Alu -17 295 1 6118 139 21 26 chr17 13200137 13200255 -76304298 - L1MC1 LINE L1 -433 5900 5783 2188 221 25 10 chr17 13200255 13200734 -76303819 + MER66B LTR ERV1 1 486 0 6118 139 21 26 chr17 13200734 13201396 -76303157 - L1MC1 LINE L1 -550 5783 5122 867 254 102 25 chr17 13201561 13201836 -76302717 + MLT1I LTR MaLR 114 409 0 312 335 206 0 chr17 13202372 13202542 -76302011 - MIR SINE MIR -11 251 47 24 0 0 0 chr17 13203120 13203144 -76301409 + AT_rich Low_complexity Low_complexity 1 24 0 415 239 57 45 chr17 13203540 13203716 -76300837 - L1ME4a LINE L1 0 6121 5944 354 299 112 22 chr17 13203779 13204003 -76300550 + MIR SINE MIR 17 260 -2 2416 74 0 0 chr17 13204075 13204371 -76300182 - AluSg1 SINE Alu -13 296 1 452 283 136 29 chr17 13204378 13204650 -76299903 - L1ME4a LINE L1 -297 5824 5524 1177 204 37 69 chr17 13204895 13205272 -76299281 - MLT1A1 LTR MaLR 0 365 1 938 186 39 20 chr17 13205569 13205773 -76298780 + MER3 DNA MER1_type 1 208 -1 264 216 0 0 chr17 13205731 13205782 -76298771 - MER3 DNA MER1_type -119 90 40 * 217 309 0 0 chr17 13205827 13205882 -76298671 + MIR SINE MIR 90 144 -64 188 385 0 0 chr17 13205871 13205936 -76298617 - MIR SINE MIR -92 116 52 * 1667 172 24 10 chr17 13206034 13206325 -76298228 - AluJo SINE Alu -17 295 1 517 299 120 25 chr17 13206377 13206618 -76297935 + L2 LINE L2 3050 3313 0 299 311 68 0 chr17 13206980 13207083 -76297470 + MIR SINE MIR 132 241 -21 183 80 0 0 chr17 13207347 13207372 -76297181 + (CCCTAA)n Simple_repeat Simple_repeat 1 25 0 26 64 0 0 chr17 13208491 13208538 -76296015 + AT_rich Low_complexity Low_complexity 1 47 0 3415 191 8 33 chr17 13208874 13208978 -76295575 - L1 LINE L1 -2299 3847 3742 2463 63 0 3 chr17 13208978 13209277 -76295276 - AluY SINE Alu -13 298 1 3415 191 8 33 chr17 13209277 13210019 -76294534 - L1 LINE L1 -2404 3742 3022 244 88 0 0 chr17 13210042 13210076 -76294477 - L1 LINE L1 -1374 4772 4739 2482 159 66 15 chr17 13210090 13210562 -76293991 + L1PA16 LINE L1 5669 6164 -2 22 35 0 0 chr17 13210562 13210591 -76293962 + AT_rich Low_complexity Low_complexity 1 29 0 1610 213 49 62 chr17 13210596 13211108 -76293445 + MLT1D LTR MaLR 1 505 0 269 143 14 57 chr17 13211278 13211348 -76293205 - L1ME LINE L1 -233 5888 5822 366 304 118 29 chr17 13211416 13211798 -76292755 - L1ME LINE L1 -439 5682 5267 219 69 0 0 chr17 13212048 13212077 -76292476 + (CA)n Simple_repeat Simple_repeat 1 29 0 180 77 0 0 chr17 13212078 13212104 -76292449 + (TATATG)n Simple_repeat Simple_repeat 5 30 0 328 205 12 118 chr17 13212383 13212544 -76292009 - MIR SINE MIR -30 232 89 1790 144 35 78 chr17 13212705 13212742 -76291811 - L1MA9 LINE L1 -346 5945 5908 1985 130 40 0 chr17 13212742 13213041 -76291512 + AluSx SINE Alu 1 311 -1 1790 144 35 78 chr17 13213041 13213377 -76291176 - L1MA9 LINE L1 -383 5908 5588 1315 180 57 70 chr17 13213375 13213486 -76291067 + L1MA9 LINE L1 5946 6057 -255 * 2316 101 0 3 chr17 13213486 13213792 -76290761 + AluSx SINE Alu 1 305 -7 1315 180 57 70 chr17 13213792 13214052 -76290501 + L1MA9 LINE L1 6057 6312 0 213 94 0 0 chr17 13214238 13214270 -76290283 + (CA)n Simple_repeat Simple_repeat 1 32 0 305 224 12 118 chr17 13214544 13214705 -76289848 - MIR SINE MIR -30 232 89 644 238 136 88 chr17 13215560 13215833 -76288720 + MER69 DNA AcHobo 283 568 -658 * 1044 175 99 21 chr17 13215831 13216214 -76288339 + MER69 DNA AcHobo 2010 2522 -4 2028 140 0 10 chr17 13216798 13217106 -76287447 - AluSx SINE Alu -7 305 1 325 38 0 38 chr17 13217474 13217527 -76287026 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 610 211 6 75 chr17 13217875 13218036 -76286517 - L2 LINE L2 0 3313 3164 1773 234 57 7 chr17 13218047 13218570 -76285983 + HsTC2 DNA Tc2 2 591 -1307 861 125 21 0 chr17 13218570 13218714 -76285839 + L1MA9 LINE L1 6162 6308 -4 1150 153 129 0 chr17 13219323 13219532 -76285021 + MER46A DNA MER2_type 1 236 0 448 255 40 20 chr17 13220857 13221006 -76283547 - L2 LINE L2 0 3313 3162 195 296 0 0 chr17 13221051 13221105 -76283448 + MIR SINE MIR 139 192 -70 258 375 46 13 chr17 13221335 13221487 -76283066 + MLT1K LTR MaLR 166 322 -266 2132 155 32 34 chr17 13221517 13222076 -76282477 - MLT2A2 LTR ERVL 0 554 1 519 273 160 0 chr17 13222175 13222325 -76282228 - MIR SINE MIR -73 189 16 2004 133 10 0 chr17 13223048 13223342 -76281211 - AluSg SINE Alu -13 297 1 223 400 69 12 chr17 13224620 13224780 -76279773 - L2 LINE L2 -4 3268 3100 206 254 51 0 chr17 13225620 13225679 -76278874 + MER5A DNA MER1_type 128 189 0 735 235 9 50 chr17 13225820 13226020 -76278533 + L1MD2 LINE L1 5080 5266 -891 2229 99 0 13 chr17 13226020 13226324 -76278229 - AluSq SINE Alu -13 300 1 735 235 9 50 chr17 13226324 13226392 -76278161 + L1MD2 LINE L1 5266 5335 -822 1090 128 17 22 chr17 13226393 13226572 -76277981 + MLT1B LTR MaLR 1 178 -212 2106 108 20 7 chr17 13226572 13226877 -76277676 + AluSc SINE Alu 1 309 0 209 122 49 0 chr17 13226880 13226921 -76277632 + A-rich Low_complexity Low_complexity 3 45 0 435 145 12 0 chr17 13226970 13227053 -76277500 + MLT1B LTR MaLR 192 275 -115 660 164 35 0 chr17 13227089 13227205 -76277348 + MLT1B LTR MaLR 269 388 -2 3947 186 67 38 chr17 13227206 13228187 -76276366 + L1MD2 LINE L1 5331 6340 -19 2273 129 72 33 chr17 13228428 13228932 -76275621 + MLT2A2 LTR ERVL 1 547 -7 2274 89 3 32 chr17 13228998 13229313 -76275240 + AluSp SINE Alu 3 308 -5 453 228 32 3 chr17 13229656 13229770 -76274783 + L1MC/D LINE L1 5528 5643 -522 2223 108 3 3 chr17 13229818 13230124 -76274429 + AluSq SINE Alu 3 308 -5 1827 198 20 2 chr17 13231665 13232064 -76272489 - L1MB5 LINE L1 -9 6165 5760 278 307 33 39 chr17 13232170 13232323 -76272230 - L1M4 LINE L1 -6275 267 116 1085 269 45 8 chr17 13234375 13234776 -76269777 + L1ME2 LINE L1 2417 2832 -3314 426 279 32 19 chr17 13234815 13234969 -76269584 + AluJo SINE Alu 74 229 -83 183 129 0 0 chr17 13234969 13235000 -76269553 + (A)n Simple_repeat Simple_repeat 1 31 0 1583 274 89 52 chr17 13235000 13236005 -76268548 + L1ME2 LINE L1 2814 3855 -2291 246 228 0 0 chr17 13236317 13236374 -76268179 + L1 LINE L1 4255 4311 -1835 8653 173 11 17 chr17 13236687 13238960 -76265593 + L1PB3 LINE L1 3537 5789 -365 241 180 33 16 chr17 13238961 13239022 -76265531 + (TA)n Simple_repeat Simple_repeat 1 62 0 340 130 0 4 chr17 13239023 13239080 -76265473 - L1MB5 LINE L1 -374 5780 5735 261 0 0 0 chr17 13239108 13239137 -76265416 + (CA)n Simple_repeat Simple_repeat 1 29 0 2408 115 14 0 chr17 13239137 13239494 -76265059 + L1PB3 LINE L1 5793 6154 0 2211 255 71 1 chr17 13239500 13240179 -76264374 + L1ME2 LINE L1 3841 4566 -1580 21 0 0 0 chr17 13240309 13240330 -76264223 + AT_rich Low_complexity Low_complexity 1 21 0 305 233 0 58 chr17 13240480 13240566 -76263987 - L2 LINE L2 0 3313 3233 1663 230 53 13 chr17 13240838 13241312 -76263241 + L1ME2 LINE L1 5499 5991 -173 405 226 0 17 chr17 13241333 13241448 -76263105 + L1MA10 LINE L1 6220 6332 -2 42 0 0 0 chr17 13242802 13242844 -76261709 + AT_rich Low_complexity Low_complexity 1 42 0 2242 86 0 0 chr17 13243023 13243303 -76261250 + AluSg1 SINE Alu 21 300 -9 1696 94 123 7 chr17 13243668 13243944 -76260609 + AluSg1 SINE Alu 1 308 -1 241 299 176 25 chr17 13244577 13244821 -76259732 - L2 LINE L2 -525 2789 2509 1605 229 16 8 chr17 13244834 13245205 -76259348 - MLT1A2 LTR MaLR 0 374 1 195 69 0 0 chr17 13245213 13245242 -76259311 + (CA)n Simple_repeat Simple_repeat 2 30 0 503 355 65 48 chr17 13245744 13246263 -76258290 - L2 LINE L2 -23 3249 2738 448 202 183 47 chr17 13246568 13246781 -76257772 - MLT1K LTR MaLR -2 586 345 988 176 136 10 chr17 13247178 13247377 -76257176 - MER58A DNA MER1_type 0 224 1 2195 105 3 7 chr17 13248758 13249053 -76255500 + AluSx SINE Alu 1 294 -18 266 293 98 8 chr17 13249899 13250032 -76254521 + L2 LINE L2 2836 2980 -292 200 327 40 20 chr17 13250059 13250160 -76254393 + MIR SINE MIR 90 192 -70 415 145 66 0 chr17 13250321 13250397 -76254156 - L1MA9 LINE L1 -147 6165 6085 321 336 72 28 chr17 13250569 13250929 -76253624 + HAL1b LINE L1 399 774 -574 716 189 182 0 chr17 13252365 13252524 -76252029 + MER5A DNA MER1_type 1 188 -1 188 295 16 109 chr17 13252702 13252885 -76251668 + MIR3 SINE MIR 41 206 -2 311 272 35 58 chr17 13253592 13253765 -76250788 + L1MEd LINE L1 913 1081 -5038 329 284 28 8 chr17 13253852 13254022 -76250531 - L1MEc LINE L1 -3403 2812 2640 694 262 66 44 chr17 13254075 13254443 -76250110 - L1MEc LINE L1 -3708 2507 2172 264 310 25 30 chr17 13254454 13254654 -76249899 - L1MEc LINE L1 -4322 2074 1876 1801 146 0 0 chr17 13255983 13256258 -76248295 + MER57A LTR ERV1 1 275 -128 445 154 0 22 chr17 13256328 13256419 -76248134 + MER53 DNA DNA 98 186 -3 1240 198 83 22 chr17 13256779 13257142 -76247411 - MER3 DNA MER1_type 0 2624 2240 305 204 45 11 chr17 13257138 13257240 -76247313 - MER3 DNA MER1_type -86 123 81 * 2122 138 29 9 chr17 13258224 13258565 -76245988 - MER7A DNA MER2_type 0 346 1 362 292 21 0 chr17 13258967 13259063 -76245490 + MIR SINE MIR 57 154 -108 21 0 0 0 chr17 13259323 13259344 -76245209 + AT_rich Low_complexity Low_complexity 1 21 0 3092 199 73 34 chr17 13260112 13261243 -76243310 - L1MB7 LINE L1 0 6184 4977 1786 191 0 0 chr17 13261243 13261541 -76243012 - AluSx SINE Alu -14 298 1 3092 199 73 34 chr17 13261541 13261877 -76242676 - L1MB7 LINE L1 -1207 4977 4656 22 35 0 0 chr17 13261950 13261979 -76242574 + AT_rich Low_complexity Low_complexity 1 29 0 1452 40 51 0 chr17 13262151 13262328 -76242225 - AluY SINE Alu -5 306 121 2256 105 10 0 chr17 13262648 13262944 -76241609 - AluSp SINE Alu -14 299 1 274 327 97 14 chr17 13262957 13263174 -76241379 - L1ME LINE L1 -306 6144 5910 296 314 31 31 chr17 13263222 13263445 -76241108 - L1ME LINE L1 -3375 3051 2829 1773 135 66 3 chr17 13263572 13263861 -76240692 - AluSx SINE Alu -5 307 1 304 306 20 34 chr17 13263862 13264009 -76240544 - L1ME LINE L1 -3956 2470 2326 25 51 0 0 chr17 13264009 13264048 -76240505 + AT_rich Low_complexity Low_complexity 1 39 0 1662 265 131 16 chr17 13264048 13264844 -76239709 - L1ME3A LINE L1 -19 6545 5659 1035 206 56 28 chr17 13264950 13265409 -76239144 - MLT1E2 LTR MaLR -54 571 89 273 242 158 47 chr17 13265574 13265871 -76238682 - L1ME3A LINE L1 -1072 5468 5139 298 302 112 19 chr17 13265952 13266379 -76238174 - L1ME3A LINE L1 -4531 2009 1543 329 304 51 34 chr17 13266696 13266933 -76237620 - L1MDa LINE L1 -860 1630 1294 363 269 12 35 chr17 13267033 13267204 -76237349 - L1MDa LINE L1 -4918 1201 1035 259 330 33 33 chr17 13267434 13267649 -76236904 - L1MDa LINE L1 -5305 814 600 315 335 39 68 chr17 13267911 13268102 -76236451 - HAL1 LINE L1 -1129 1378 1196 2333 101 10 0 chr17 13268102 13268409 -76236144 - AluSx SINE Alu -2 310 1 315 335 39 68 chr17 13268409 13268498 -76236055 - HAL1 LINE L1 -1311 1196 1106 2217 88 13 10 chr17 13268820 13269126 -76235427 - AluSq SINE Alu -6 307 1 589 240 47 0 chr17 13269838 13269967 -76234586 + MLT1E LTR MaLR 1 135 -458 1293 266 56 43 chr17 13270026 13270489 -76234064 + MLT1E LTR MaLR 119 587 -6 2420 80 0 16 chr17 13270532 13270843 -76233710 + AluSc SINE Alu 3 308 -1 330 300 106 0 chr17 13271126 13271285 -76233268 - MIR SINE MIR -56 206 20 2159 98 0 36 chr17 13271815 13272121 -76232432 + AluSg SINE Alu 1 295 -15 403 209 76 9 chr17 13272431 13272536 -76232017 + MLT1E2 LTR MaLR 397 508 -118 3778 268 95 64 chr17 13272542 13274225 -76230328 - L2 LINE L2 -780 2534 800 2462 93 3 0 chr17 13274503 13274814 -76229739 - AluSx SINE Alu 0 312 1 267 105 250 13 chr17 13274869 13274945 -76229608 - L1ME2 LINE L1 -1 6163 6070 504 89 0 0 chr17 13274961 13275040 -76229513 - Alu SINE Alu 0 312 234 2358 224 74 33 chr17 13275044 13275594 -76228959 - L1ME2 LINE L1 -85 6079 5553 1328 190 42 48 chr17 13275594 13275930 -76228623 - AluJo SINE Alu 0 312 1 2358 224 74 33 chr17 13275930 13276681 -76227872 - L1ME2 LINE L1 -611 5553 4695 2467 81 0 7 chr17 13276681 13276988 -76227565 + AluSq SINE Alu 1 305 -8 2358 224 74 33 chr17 13276988 13277317 -76227236 - L1ME2 LINE L1 -1469 4695 4381 1996 173 46 0 chr17 13277318 13277687 -76226866 - MSTB LTR MaLR 0 426 41 2412 81 0 0 chr17 13277688 13277995 -76226558 + AluY SINE Alu 2 308 -3 1290 94 0 6 chr17 13278027 13278197 -76226356 + AluSc SINE Alu 125 293 -16 288 192 0 0 chr17 13278197 13278249 -76226304 - MSTB LTR MaLR -374 52 1 5058 213 115 50 chr17 13278261 13278875 -76225678 - L1MC3 LINE L1 -10 7775 7202 2382 88 3 0 chr17 13278875 13279172 -76225381 + AluSp SINE Alu 1 298 -15 5058 213 115 50 chr17 13279172 13280343 -76224210 - L1MC3 LINE L1 -583 7202 5874 232 261 45 9 chr17 13281408 13281519 -76223034 + LTR33A LTR ERVL 405 519 -4 2353 112 0 0 chr17 13281593 13281906 -76222647 + AluSq SINE Alu 1 313 0 309 181 32 85 chr17 13282449 13282543 -76222010 - MIR SINE MIR -113 149 61 416 239 246 7 chr17 13283565 13283707 -76220846 + MER5B DNA MER1_type 1 176 -2 260 182 15 76 chr17 13283707 13283762 -76220791 - MIR3 SINE MIR -50 158 108 308 234 129 16 chr17 13285083 13285207 -76219346 + MIR SINE MIR 66 203 -59 531 204 54 54 chr17 13285863 13286010 -76218543 + MIR SINE MIR 51 197 -65 444 299 68 7 chr17 13286758 13286905 -76217648 + MIR3 SINE MIR 7 162 -46 426 265 75 20 chr17 13286938 13287085 -76217468 + MIR SINE MIR 35 189 -73 439 179 0 63 chr17 13287371 13287466 -76217087 - MER58C DNA MER1_type 0 215 127 276 263 90 8 chr17 13287582 13287715 -76216838 - MLT1J2 LTR MaLR -44 406 263 402 257 0 0 chr17 13287746 13287851 -76216702 - MER58C DNA MER1_type -110 105 1 1362 206 124 33 chr17 13288080 13288147 -76216406 - MLT1C LTR MaLR 0 467 408 2374 59 0 0 chr17 13288147 13288436 -76216117 + AluY SINE Alu 1 289 -22 1362 206 124 33 chr17 13288436 13288796 -76215757 - MLT1C LTR MaLR -59 408 1 216 336 29 7 chr17 13289654 13289791 -76214762 - L2 LINE L2 -1651 1663 1524 540 266 0 28 chr17 13289924 13290067 -76214486 + MIR SINE MIR 92 230 -32 209 160 0 40 chr17 13290253 13290303 -76214250 + (CAT)n Simple_repeat Simple_repeat 3 50 0 243 288 68 0 chr17 13291597 13291670 -76212883 - MLT1J2 LTR MaLR -124 326 249 310 283 113 0 chr17 13291751 13291857 -76212696 - MLT1J2 LTR MaLR -332 118 1 667 240 87 15 chr17 13292380 13292576 -76211977 - MIR SINE MIR -2 260 51 1209 261 40 29 chr17 13293232 13293684 -76210869 - L1MDa LINE L1 -1994 4546 4090 1949 161 3 16 chr17 13293684 13293995 -76210558 - AluJb SINE Alu -5 307 1 952 144 0 11 chr17 13294009 13294189 -76210364 + (TTCC)n Simple_repeat Simple_repeat 2 179 0 3057 233 75 33 chr17 13294195 13295520 -76209033 - L1MDa LINE L1 -2472 4068 2688 302 96 0 19 chr17 13295523 13295575 -76208978 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 6178 85 13 0 chr17 13295611 13296748 -76207805 - L1PB1 LINE L1 0 6151 5004 2130 223 92 55 chr17 13296792 13297983 -76206570 - L1MDa LINE L1 -3894 2646 1412 2492 233 12 16 chr17 13298044 13298836 -76205717 + L1M4 LINE L1 4630 5420 -743 2394 74 0 0 chr17 13299467 13299765 -76204788 + AluY SINE Alu 1 298 -13 531 240 161 65 chr17 13299908 13300125 -76204428 + MIR SINE MIR 11 248 -14 295 341 79 64 chr17 13300647 13300914 -76203639 - L2 LINE L2 -2844 470 200 564 323 102 73 chr17 13301460 13301912 -76202641 - L1MDa LINE L1 -5589 941 477 371 248 67 0 chr17 13304141 13304246 -76200307 + MIR SINE MIR 37 148 -114 416 138 53 32 chr17 13304279 13304337 -76200216 - MER53 DNA DNA 0 189 127 2392 93 0 3 chr17 13304337 13304650 -76199903 - AluSq SINE Alu -1 312 1 416 138 53 32 chr17 13304650 13304685 -76199868 - MER53 DNA DNA -62 127 94 673 264 67 57 chr17 13305202 13305408 -76199145 - L1ME4a LINE L1 -1 6120 5917 2390 88 0 0 chr17 13305408 13305705 -76198848 - AluSc SINE Alu -12 297 1 673 264 67 57 chr17 13305705 13305911 -76198642 - L1ME4a LINE L1 -204 5917 5700 2666 35 0 7 chr17 13305911 13306221 -76198332 + AluY SINE Alu 1 308 -3 673 264 67 57 chr17 13306221 13306318 -76198235 - L1ME4a LINE L1 -421 5700 5605 4672 118 18 3 chr17 13306331 13307059 -76197494 - L1MA2 LINE L1 -5 6299 5561 514 241 30 106 chr17 13307076 13307313 -76197240 - MIR SINE MIR -7 255 37 276 311 109 0 chr17 13307561 13307680 -76196873 - MIR SINE MIR -98 164 33 226 232 0 18 chr17 13307948 13308004 -76196549 + (CATA)n Simple_repeat Simple_repeat 3 57 0 337 344 117 23 chr17 13308382 13308777 -76195776 - L1ME4a LINE L1 -1316 4830 4399 382 343 108 21 chr17 13309209 13309541 -76195012 - L1ME4a LINE L1 -2210 3936 3576 270 313 0 0 chr17 13309642 13309738 -76194815 - L1ME4a LINE L1 -2685 3461 3366 539 343 77 32 chr17 13310027 13310745 -76193808 - L1ME4a LINE L1 -3085 3061 2312 223 359 8 0 chr17 13310816 13310933 -76193620 + MIR SINE MIR 132 249 -13 2262 85 0 3 chr17 13310968 13311250 -76193303 - AluSx SINE Alu -14 298 18 541 283 36 0 chr17 13311892 13312058 -76192495 - MER20 DNA MER1_type 0 219 48 1892 220 79 0 chr17 13312060 13312551 -76192002 + MER74A LTR ERVL 2 531 -27 2224 96 0 0 chr17 13312569 13312881 -76191672 - AluSc SINE Alu 0 312 1 193 318 36 55 chr17 13312918 13313028 -76191525 - MER5A DNA MER1_type -74 115 8 280 345 220 11 chr17 13313405 13313582 -76190971 + L2 LINE L2 3059 3272 0 192 152 0 0 chr17 13314160 13314193 -76190360 + T-rich Low_complexity Low_complexity 1 33 0 211 284 0 42 chr17 13315022 13315117 -76189436 + CT-rich Low_complexity Low_complexity 3 93 0 1864 198 118 82 chr17 13315495 13316214 -76188339 + LTR1B LTR ERV1 1 745 -81 558 178 17 106 chr17 13316699 13316879 -76187674 - L1MA10 LINE L1 -3 6331 6168 1536 189 60 0 chr17 13316883 13317184 -76187369 - L1MC1 LINE L1 0 6333 6015 289 316 53 27 chr17 13317638 13317825 -76186728 + L2 LINE L2 2845 3036 -277 834 247 46 0 chr17 13317899 13318093 -76186460 - MER3 DNA MER1_type -1 208 6 2229 115 3 0 chr17 13320206 13320501 -76184052 + AluSp SINE Alu 1 296 -17 725 212 34 50 chr17 13320622 13320801 -76183752 + FRAM SINE Alu 1 40 0 2341 60 0 7 chr17 13320806 13321111 -76183442 + AluY SINE Alu 1 303 0 637 249 56 60 chr17 13321623 13321892 -76182661 + L2 LINE L2 3046 3313 0 469 130 0 0 chr17 13322313 13322390 -76182163 + L1P4 LINE L1 5456 5532 -629 206 116 23 0 chr17 13322671 13322714 -76181839 + GA-rich Low_complexity Low_complexity 2 45 0 2197 95 20 0 chr17 13322780 13323075 -76181478 + AluSg SINE Alu 1 301 -9 752 332 100 0 chr17 13323213 13323553 -76181000 - MLT1I LTR MaLR 0 409 36 513 323 156 23 chr17 13323672 13323945 -76180608 - L2 LINE L2 -803 2511 2276 470 278 37 0 chr17 13323945 13324053 -76180500 - MER81 DNA DNA -1 113 2 513 323 156 23 chr17 13324053 13324300 -76180253 - L2 LINE L2 -1038 2276 1922 8694 196 65 69 chr17 13324781 13325810 -76178743 - L1 LINE L1 -830 5316 4284 225 0 0 0 chr17 13325810 13325835 -76178718 + (TG)n Simple_repeat Simple_repeat 2 26 0 8694 196 65 69 chr17 13325835 13326452 -76178101 - L1 LINE L1 -1862 4284 3666 180 0 0 0 chr17 13326452 13326472 -76178081 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 8694 196 65 69 chr17 13326472 13326710 -76177843 - L1 LINE L1 -2480 3666 3429 2568 50 0 0 chr17 13326710 13327011 -76177542 - AluYa5 SINE Alu -9 302 2 8694 196 65 69 chr17 13327011 13327344 -76177209 - L1 LINE L1 -2717 3429 3096 186 43 0 0 chr17 13327344 13327367 -76177186 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 8694 196 65 69 chr17 13327367 13327798 -76176755 - L1 LINE L1 -3050 3096 2676 297 216 0 0 chr17 13327801 13327852 -76176701 + Tigger1 DNA MER2_type 2368 2418 0 3469 185 86 31 chr17 13327853 13328763 -76175790 - L1MDa LINE L1 -4318 2222 1263 2187 102 0 7 chr17 13328772 13329066 -76175487 - AluSx SINE Alu -7 305 14 2031 262 65 68 chr17 13329104 13329409 -76175144 - L1MDa LINE L1 -5445 1095 790 2392 94 3 0 chr17 13329409 13329707 -76174846 - AluSp SINE Alu -14 299 1 2031 262 65 68 chr17 13329707 13330314 -76174239 - L1MDa LINE L1 -5750 790 22 23 68 0 0 chr17 13330486 13330530 -76174023 + AT_rich Low_complexity Low_complexity 1 44 0 819 301 68 51 chr17 13330605 13331447 -76173106 + L1ME4a LINE L1 5265 6120 -1 523 318 73 17 chr17 13331481 13331714 -76172839 - MLT1L LTR MaLR -129 486 241 403 295 29 43 chr17 13332262 13332469 -76172084 + MIR3 SINE MIR 3 206 -2 454 232 43 29 chr17 13332955 13333093 -76171460 + MIR SINE MIR 50 189 -73 366 317 72 41 chr17 13333651 13334070 -76170483 + L1MC/D LINE L1 4881 5312 -834 23 0 0 0 chr17 13334117 13334140 -76170413 + AT_rich Low_complexity Low_complexity 1 23 0 307 330 76 39 chr17 13334189 13334312 -76170241 + L1MC/D LINE L1 5442 5559 -2249 2296 110 0 0 chr17 13334312 13334620 -76169933 + AluSq SINE Alu 1 308 -5 307 330 76 39 chr17 13334620 13334851 -76169702 + L1MC/D LINE L1 5559 5809 -1999 1183 219 76 17 chr17 13335024 13335326 -76169227 + L1MD3 LINE L1 7640 7959 -36 2523 69 0 3 chr17 13335356 13335659 -76168894 + AluSx SINE Alu 1 302 -10 258 239 0 28 chr17 13336803 13336874 -76167679 - L1MD3 LINE L1 -76 7919 7851 249 287 67 62 chr17 13337093 13337302 -76167251 - L2 LINE L2 -337 2977 2768 1994 187 23 41 chr17 13337309 13337470 -76167083 + MLT1B LTR MaLR 1 163 -227 2259 100 3 7 chr17 13337470 13337770 -76166783 - AluSx SINE Alu -13 299 1 1994 187 23 41 chr17 13337770 13337999 -76166554 + MLT1B LTR MaLR 163 384 -6 258 365 19 9 chr17 13338164 13338224 -76166329 + MER91C DNA MER1_type 5 63 -77 16261 125 14 24 chr17 13338224 13338405 -76166148 - Tigger1 DNA MER2_type 0 2418 2237 2215 108 3 0 chr17 13338405 13338702 -76165851 + AluSx SINE Alu 1 298 -14 16261 125 14 24 chr17 13338702 13339968 -76164585 - Tigger1 DNA MER2_type -181 2237 960 2214 91 7 0 chr17 13339968 13340297 -76164256 - AluSp SINE Alu 0 331 1 16261 125 14 24 chr17 13340297 13341053 -76163500 - Tigger1 DNA MER2_type -1458 960 236 2382 90 0 3 chr17 13341053 13341352 -76163201 + AluSg SINE Alu 1 298 -12 16261 125 14 24 chr17 13341352 13341585 -76162968 - Tigger1 DNA MER2_type -2182 236 2 258 365 19 9 chr17 13341585 13341631 -76162922 + MER91C DNA MER1_type 63 112 -28 281 353 55 35 chr17 13341677 13341966 -76162587 - L2 LINE L2 -741 2573 2279 2162 134 0 7 chr17 13342088 13342417 -76162136 + AluSx SINE Alu 1 312 0 213 283 75 0 chr17 13342611 13342664 -76161889 - L2 LINE L2 -2 3311 3255 368 225 297 7 chr17 13344773 13344911 -76159642 - MER5A DNA MER1_type 0 189 12 440 291 77 39 chr17 13345307 13345489 -76159064 + MIR3 SINE MIR 15 203 -5 330 235 34 141 chr17 13345612 13345801 -76158752 + MIR SINE MIR 8 169 -93 573 221 9 0 chr17 13345801 13345914 -76158639 + MER81 DNA DNA 1 114 0 330 235 34 141 chr17 13345914 13345958 -76158595 + MIR SINE MIR 169 216 -46 2371 74 3 0 chr17 13346021 13346306 -76158247 - AluSp SINE Alu -15 298 13 495 260 31 0 chr17 13347108 13347235 -76157318 - MER94 DNA DNA -3 131 1 193 220 40 0 chr17 13348064 13348114 -76156439 + L3 LINE CR1 1524 1575 -2 422 326 56 69 chr17 13349326 13349559 -76154994 + L2 LINE L2 3024 3253 -19 180 0 0 0 chr17 13350267 13350287 -76154266 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 6908 79 44 0 chr17 13350292 13351436 -76153117 - L1PA8A LINE L1 -13 6118 4955 2012 191 17 0 chr17 13351436 13351781 -76152772 - MER82 DNA MER2_type -302 351 1 708 197 77 11 chr17 13351781 13351964 -76152589 + L1MC5 LINE L1 7732 7926 -35 315 0 0 0 chr17 13352797 13352832 -76151721 + (TG)n Simple_repeat Simple_repeat 2 36 0 186 404 0 0 chr17 13353059 13353163 -76151390 - MIR SINE MIR 0 262 159 3586 151 76 0 chr17 13353455 13354092 -76150461 - L1MC3 LINE L1 -14 7771 5609 373 263 0 0 chr17 13354101 13354181 -76150372 + L2 LINE L2 3234 3313 0 772 166 47 64 chr17 13355248 13355483 -76149070 - Charlie5 DNA MER1_type -29 2583 2353 667 239 13 0 chr17 13355486 13355641 -76148912 - Charlie5 DNA MER1_type -2416 196 40 403 288 63 21 chr17 13355650 13355841 -76148712 - L2 LINE L2 -198 3115 2917 2764 155 34 8 chr17 13356918 13357389 -76147164 + L1MA8 LINE L1 5799 6281 -10 1185 123 0 0 chr17 13357585 13357755 -76146798 + AluSg/x SINE Alu 125 294 -16 584 105 0 11 chr17 13357755 13357850 -76146703 + (GGGGA)n Simple_repeat Simple_repeat 3 96 0 238 313 188 10 chr17 13358285 13358493 -76146060 + L3 LINE CR1 1310 1554 -23 2199 115 0 13 chr17 13358664 13358976 -76145577 - AluSx SINE Alu -4 308 1 1612 173 39 3 chr17 13359144 13359428 -76145125 - AluJo SINE Alu -18 294 1 2214 98 14 0 chr17 13359672 13359969 -76144584 - AluSp SINE Alu -12 301 1 799 254 96 96 chr17 13361330 13361728 -76142825 - MLT1J LTR MaLR -2 509 112 2208 126 7 0 chr17 13361958 13362267 -76142286 + AluSx SINE Alu 1 311 -1 2347 82 10 0 chr17 13364736 13365039 -76139514 + AluSp SINE Alu 1 306 -7 885 261 68 5 chr17 13365043 13365265 -76139288 - MIR SINE MIR -21 241 6 542 260 64 64 chr17 13366173 13366392 -76138161 + LTR16A LTR ERVL 61 279 -171 931 175 58 153 chr17 13366393 13366554 -76137999 - MER96B DNA MER1_type? 0 417 242 2218 97 0 0 chr17 13366554 13366833 -76137720 - AluSc SINE Alu -29 280 2 931 175 58 153 chr17 13366833 13366855 -76137698 - MER96B DNA MER1_type? -175 242 220 1481 185 3 60 chr17 13366855 13367157 -76137396 + AluJo SINE Alu 5 289 -23 931 175 58 153 chr17 13367157 13367418 -76137135 - MER96B DNA MER1_type? -197 220 14 278 313 18 37 chr17 13367432 13367595 -76136958 + LTR16A1 LTR ERVL 298 457 0 228 336 71 71 chr17 13367639 13367850 -76136703 + MIR SINE MIR 48 258 -4 6665 88 17 0 chr17 13368764 13369735 -76134818 - L1PA13 LINE L1 0 6163 5170 1681 162 4 0 chr17 13370229 13370629 -76133924 - AluSx SINE Alu 0 445 45 616 214 81 35 chr17 13370735 13370908 -76133645 - MIR SINE MIR -66 196 16 452 274 32 16 chr17 13371372 13371496 -76133057 - MIR3 SINE MIR -48 160 35 245 193 70 0 chr17 13371772 13371829 -76132724 + MIR SINE MIR 81 141 -121 494 175 68 10 chr17 13372447 13372550 -76132003 - MIR3 SINE MIR -48 160 52 2469 132 5 70 chr17 13373561 13373978 -76130575 - MLT1B LTR MaLR 0 390 1 904 202 14 69 chr17 13374092 13374310 -76130243 + MER63A DNA MER1_type 1 206 -4 339 233 91 62 chr17 13374954 13375130 -76129423 + HAL1 LINE L1 1208 1388 -1119 324 376 49 0 chr17 13375667 13375872 -76128681 + L2 LINE L2 2525 2739 -575 2285 75 0 7 chr17 13376028 13376309 -76128244 - AluSc SINE Alu -14 295 17 449 275 16 28 chr17 13376549 13376731 -76127822 - MER104 DNA MER2_type 0 180 1 317 330 104 0 chr17 13376754 13376869 -76127684 - L2 LINE L2 -5 3308 3182 191 296 67 89 chr17 13376883 13377018 -76127535 + L2 LINE L2 3141 3272 0 6162 41 0 0 chr17 13377791 13378653 -76125900 + L1PA5 LINE L1 5236 6154 0 577 232 58 0 chr17 13379154 13379292 -76125261 - MLT1A1 LTR MaLR -77 288 143 344 284 101 0 chr17 13379292 13379401 -76125152 - MIR SINE MIR -71 137 18 2347 99 0 0 chr17 13380635 13380938 -76123615 - AluY SINE Alu 0 311 9 284 298 93 40 chr17 13381328 13381479 -76123074 + MIR SINE MIR 85 243 -19 2280 97 3 0 chr17 13381761 13382059 -76122494 - AluSq SINE Alu -14 299 1 212 250 0 0 chr17 13382278 13382322 -76122231 + MIR3 SINE MIR 117 160 -48 376 339 205 7 chr17 13382337 13382747 -76121806 - L2 LINE L2 -10 3303 2813 438 284 23 51 chr17 13382972 13383187 -76121366 - LTR33 LTR ERVL -294 227 19 637 312 35 9 chr17 13383230 13383461 -76121092 - L2 LINE L2 -541 2773 2537 243 96 0 0 chr17 13384480 13384532 -76120021 - LTR66 LTR ERVL -165 445 394 309 211 22 33 chr17 13384556 13384646 -76119907 + L1MC4 LINE L1 6616 6704 -1338 462 31 132 0 chr17 13384663 13384822 -76119731 + (TA)n Simple_repeat Simple_repeat 1 180 0 436 24 100 41 chr17 13384836 13385006 -76119547 + (TA)n Simple_repeat Simple_repeat 1 180 0 42 36 0 0 chr17 13385006 13385062 -76119491 + AT_rich Low_complexity Low_complexity 1 56 0 424 34 134 0 chr17 13385062 13385211 -76119342 + (TA)n Simple_repeat Simple_repeat 2 170 0 444 282 67 7 chr17 13385676 13385825 -76118728 + MIR SINE MIR 105 262 0 351 167 0 0 chr17 13386584 13386650 -76117903 + (CAT)n Simple_repeat Simple_repeat 1 66 0 720 267 51 51 chr17 13386656 13386892 -76117661 - MIR SINE MIR -12 250 15 4400 29 8 0 chr17 13387663 13388183 -76116370 - L1P LINE L1 -855 5291 4768 4280 11 0 0 chr17 13388176 13388649 -76115904 + L1HS LINE L1 5682 6154 -1 * 910 256 160 0 chr17 13390024 13390262 -76114291 + AluYa8 SINE Alu 3 278 -32 485 35 35 35 chr17 13390262 13390347 -76114206 + (TAAAA)n Simple_repeat Simple_repeat 1 85 0 2138 112 16 3 chr17 13390386 13390741 -76113812 + AluSq SINE Alu 1 359 0 524 346 41 68 chr17 13390741 13391405 -76113148 - L2 LINE L2 -438 2876 2231 265 304 112 0 chr17 13392294 13392419 -76112134 + L2 LINE L2 3170 3308 -5 469 256 44 0 chr17 13392820 13392957 -76111596 + MER69 DNA AcHobo 2384 2526 0 2382 101 0 0 chr17 13393004 13393311 -76111242 - AluSg SINE Alu -3 307 1 404 299 51 43 chr17 13393325 13393559 -76110994 + MER102b DNA MER1_type 103 338 -3 2054 131 19 25 chr17 13393637 13393824 -76110729 - AluJb SINE Alu 0 312 126 402 21 0 0 chr17 13393824 13393871 -76110682 + (TG)n Simple_repeat Simple_repeat 2 48 0 2054 131 19 25 chr17 13393871 13393997 -76110556 - AluJb SINE Alu -186 126 1 1207 169 86 12 chr17 13394428 13394671 -76109882 + MLT1E1 LTR MaLR 1 261 -393 2294 95 7 0 chr17 13394679 13394984 -76109569 + AluSp SINE Alu 1 307 -6 1172 213 17 9 chr17 13395025 13395255 -76109298 + MLT1E1 LTR MaLR 405 636 -18 1982 131 6 22 chr17 13395381 13395695 -76108858 + AluSx SINE Alu 1 309 -3 296 326 35 21 chr17 13395704 13395845 -76108708 - MIR SINE MIR -42 220 78 448 81 27 0 chr17 13396320 13396394 -76108159 + (CA)n Simple_repeat Simple_repeat 2 77 0 1769 208 66 37 chr17 13396836 13397318 -76107235 + MLT1D LTR MaLR 7 502 -3 216 308 15 0 chr17 13401077 13401142 -76103411 + CT-rich Low_complexity Low_complexity 1 66 0 558 235 111 51 chr17 13401507 13401741 -76102812 + MIR SINE MIR 15 262 0 261 281 97 0 chr17 13401752 13401866 -76102687 + MIR3 SINE MIR 81 205 -3 469 179 234 7 chr17 13402319 13402464 -76102089 + MER53 DNA DNA 12 189 0 1964 63 0 0 chr17 13402481 13402718 -76101835 - AluY SINE Alu -8 303 67 209 385 0 0 chr17 13403521 13403625 -76100928 + MIR3 SINE MIR 98 201 -7 348 243 146 73 chr17 13403840 13404046 -76100507 + L2 LINE L2 3045 3265 -48 220 200 0 0 chr17 13404081 13404126 -76100427 + L2 LINE L2 3265 3309 -4 214 143 0 0 chr17 13404955 13404990 -76099563 + MIR SINE MIR 110 144 -64 356 314 57 33 chr17 13406245 13406490 -76098063 - L1ME4a LINE L1 -188 5933 5683 338 198 198 0 chr17 13406948 13407034 -76097519 - MIR SINE MIR -64 198 96 207 300 0 0 chr17 13407484 13407534 -76097019 + (TATATG)n Simple_repeat Simple_repeat 3 52 0 404 308 93 31 chr17 13407588 13407909 -76096644 + L1MC4a LINE L1 4910 5250 -896 231 274 101 16 chr17 13407955 13408155 -76096398 + L1MC4a LINE L1 5327 5542 -579 301 276 20 66 chr17 13408217 13408369 -76096184 + L1MC4a LINE L1 5722 5866 -1942 2079 96 0 4 chr17 13408443 13408723 -76095830 + AluY SINE Alu 1 279 -32 243 0 0 0 chr17 13408723 13408750 -76095803 + (CAAT)n Simple_repeat Simple_repeat 4 30 0 447 19 0 0 chr17 13409108 13409160 -76095393 + (CA)n Simple_repeat Simple_repeat 1 52 0 371 181 101 94 chr17 13409263 13409412 -76095141 + L1ME4a LINE L1 5954 6103 -18 373 326 27 45 chr17 13409667 13409888 -76094665 + MIR SINE MIR 42 258 -4 3012 66 14 0 chr17 13409926 13410289 -76094264 + L1PA12 LINE L1 5801 6168 0 2480 65 0 0 chr17 13410297 13410590 -76093963 + AluY SINE Alu 1 293 -18 2425 82 0 0 chr17 13410752 13411057 -76093496 - AluSc SINE Alu -4 305 1 1745 97 0 9 chr17 13411518 13411804 -76092749 - AluY SINE Alu 0 343 60 276 259 62 12 chr17 13411838 13411919 -76092634 - MIR SINE MIR -66 142 58 29 0 0 0 chr17 13412065 13412094 -76092459 + AT_rich Low_complexity Low_complexity 1 29 0 211 175 16 16 chr17 13412406 13412469 -76092084 + (TA)n Simple_repeat Simple_repeat 2 64 0 363 270 121 66 chr17 13412608 13412897 -76091656 + L1ME4a LINE L1 5813 6117 -4 369 271 71 27 chr17 13413174 13413337 -76091216 - MIR SINE MIR -67 141 19 598 296 15 29 chr17 13413822 13414028 -76090525 - MIR SINE MIR -58 204 2 228 167 0 0 chr17 13416332 13416380 -76088173 + CT-rich Low_complexity Low_complexity 2 49 0 222 150 0 0 chr17 13416418 13416458 -76088095 + (CA)n Simple_repeat Simple_repeat 1 40 0 495 353 6 18 chr17 13416590 13416752 -76087801 + L2 LINE L2 3096 3256 -12 212 83 0 28 chr17 13416752 13416788 -76087765 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 231 88 0 0 chr17 13416951 13416985 -76087568 + (TC)n Simple_repeat Simple_repeat 1 34 0 741 222 11 72 chr17 13417352 13417431 -76087122 - MER45A DNA AcHobo -1412 169 87 2201 120 0 3 chr17 13417431 13417732 -76086821 + AluSg SINE Alu 1 300 -10 741 222 11 72 chr17 13417732 13417832 -76086721 - MER45A DNA AcHobo -1494 87 1 1820 170 0 13 chr17 13417880 13418180 -76086373 + AluSx SINE Alu 1 296 -16 2151 104 7 7 chr17 13418189 13418488 -76086065 + AluSx SINE Alu 1 299 -13 435 236 155 35 chr17 13419089 13419263 -76085290 - MIR3 SINE MIR -12 196 2 194 295 13 64 chr17 13420100 13420178 -76084375 - MIR3 SINE MIR -39 169 96 21 0 0 0 chr17 13420493 13420514 -76084039 + AT_rich Low_complexity Low_complexity 1 21 0 391 72 62 31 chr17 13421293 13421390 -76083163 + CT-rich Low_complexity Low_complexity 1 100 0 776 91 8 54 chr17 13421396 13421640 -76082913 + (TTCC)n Simple_repeat Simple_repeat 1 232 0 227 245 0 61 chr17 13421902 13422000 -76082553 + T-rich Low_complexity Low_complexity 5 96 0 2227 94 3 0 chr17 13422416 13422702 -76081851 + AluSx SINE Alu 1 287 -25 351 292 112 62 chr17 13422997 13423302 -76081251 + L1ME LINE L1 5255 5574 -2234 291 294 54 29 chr17 13423522 13423664 -76080889 + MER5A DNA MER1_type 27 172 -6 247 351 18 18 chr17 13423669 13423780 -76080773 - MIR3 SINE MIR -44 164 54 224 240 93 0 chr17 13424733 13424808 -76079745 + MIR SINE MIR 142 223 -39 2030 128 0 0 chr17 13426194 13426552 -76078001 + AluSx SINE Alu 1 358 0 542 280 76 15 chr17 13427485 13427749 -76076804 + L1ME LINE L1 5510 5789 -332 207 100 0 0 chr17 13427749 13427779 -76076774 + (A)n Simple_repeat Simple_repeat 1 30 0 1904 185 40 8 chr17 13427977 13428329 -76076224 - MLT1A1 LTR MaLR -2 363 1 2065 126 90 0 chr17 13428558 13428914 -76075639 - L1MB3 LINE L1 0 6183 5796 234 0 0 0 chr17 13428915 13428941 -76075612 + (TTG)n Simple_repeat Simple_repeat 2 27 0 553 92 0 4 chr17 13428943 13429144 -76075409 - AluSc SINE Alu -31 278 1 1919 186 14 0 chr17 13429144 13429493 -76075060 - L1MB3 LINE L1 -386 5797 5444 225 0 0 0 chr17 13430202 13430227 -76074326 + (TA)n Simple_repeat Simple_repeat 1 25 0 2248 76 38 3 chr17 13430227 13430518 -76074035 - AluY SINE Alu -10 301 1 289 289 107 0 chr17 13431324 13431445 -76073108 + L2 LINE L2 3179 3312 -1 2745 39 0 0 chr17 13431597 13431908 -76072645 - AluY SINE Alu 0 311 1 2042 119 7 0 chr17 13432004 13432290 -76072263 - AluSx SINE Alu -24 288 1 197 333 42 28 chr17 13432357 13432501 -76072052 + L2 LINE L2 2226 2371 -943 2294 95 3 19 chr17 13432760 13433075 -76071478 - AluSg SINE Alu 0 310 1 2401 66 0 13 chr17 13433266 13433568 -76070985 - AluY SINE Alu -1 310 13 3700 242 83 92 chr17 13433811 13434030 -76070523 - L1ME LINE L1 -2669 3411 3191 1917 105 0 0 chr17 13434030 13434309 -76070244 + AluSx SINE Alu 35 313 0 3700 242 83 92 chr17 13434309 13437098 -76067455 - L1ME LINE L1 -2889 3191 494 21 36 0 0 chr17 13437218 13437246 -76067307 + AT_rich Low_complexity Low_complexity 1 28 0 732 263 45 31 chr17 13437423 13437647 -76066906 - MIR SINE MIR -1 261 35 241 325 72 12 chr17 13438099 13438182 -76066371 - L3b LINE CR1 -7 1576 1489 214 301 12 48 chr17 13440150 13440233 -76064320 - L2 LINE L2 -8 3264 3185 2238 70 0 36 chr17 13440290 13440618 -76063935 + AluY SINE Alu 1 311 0 198 209 0 0 chr17 13440814 13440857 -76063696 + (TA)n Simple_repeat Simple_repeat 1 43 0 2320 79 7 0 chr17 13441265 13441557 -76062996 - AluY SINE Alu -17 294 1 210 303 30 0 chr17 13441673 13441739 -76062814 - MIR3 SINE MIR -134 74 7 192 368 132 0 chr17 13442854 13442960 -76061593 - L2 LINE L2 -9 3263 3144 21 0 0 0 chr17 13444047 13444068 -76060485 + AT_rich Low_complexity Low_complexity 1 21 0 248 294 55 46 chr17 13444124 13444233 -76060320 - MIR SINE MIR -118 144 35 602 177 53 0 chr17 13444662 13444775 -76059778 - MER5A DNA MER1_type 0 189 71 808 92 0 0 chr17 13444780 13444889 -76059664 - AluY SINE Alu -2 309 201 * 1154 86 0 0 chr17 13444888 13445027 -76059526 - AluSg1 SINE Alu -170 139 1 303 224 45 0 chr17 13445028 13445095 -76059458 - MER5A DNA MER1_type -114 75 6 351 0 0 0 chr17 13447190 13447229 -76057324 + (CA)n Simple_repeat Simple_repeat 1 39 0 359 294 49 25 chr17 13447705 13447868 -76056685 + MIR3 SINE MIR 42 208 0 1915 142 22 38 chr17 13449565 13449882 -76054671 + AluJb SINE Alu 1 312 0 265 244 163 0 chr17 13450473 13450559 -76053994 + MIR SINE MIR 13 113 -95 339 293 97 63 chr17 13450965 13451296 -76053257 - L2 LINE L2 0 3272 2931 2421 93 0 3 chr17 13451758 13452071 -76052482 + AluSx SINE Alu 1 312 0 966 246 69 4 chr17 13452139 13452399 -76052154 + L1ME LINE L1 5519 5795 -326 1705 224 50 87 chr17 13452406 13452437 -76052116 + LTR9 LTR ERV1 1 32 -580 2489 50 0 47 chr17 13452437 13452755 -76051798 + AluSx SINE Alu 1 303 -9 1705 224 50 87 chr17 13452755 13453358 -76051195 + LTR9 LTR ERV1 32 612 0 235 307 50 10 chr17 13453358 13453459 -76051094 + L1ME LINE L1 5799 5903 -218 2589 53 0 3 chr17 13453606 13453910 -76050643 + AluY SINE Alu 1 303 -8 185 191 0 64 chr17 13455326 13455373 -76049180 - L2 LINE L2 -11 3261 3218 21 0 0 0 chr17 13457091 13457112 -76047441 + AT_rich Low_complexity Low_complexity 1 21 0 334 316 76 33 chr17 13457355 13457630 -76046923 - L1M4 LINE L1 -924 5222 4936 288 269 61 35 chr17 13457749 13457946 -76046607 - L1M4 LINE L1 -1501 4645 4444 24 85 0 0 chr17 13458156 13458215 -76046338 + AT_rich Low_complexity Low_complexity 1 59 0 257 173 58 40 chr17 13458235 13458456 -76046097 + (TA)n Simple_repeat Simple_repeat 1 224 0 215 139 14 42 chr17 13458520 13458592 -76045961 + (TTATA)n Simple_repeat Simple_repeat 4 73 0 286 291 164 8 chr17 13458687 13458931 -76045622 - L1M4 LINE L1 -2150 3996 3715 315 258 115 60 chr17 13458931 13459082 -76045471 - MLT1J2 LTR MaLR -2 448 307 890 203 156 0 chr17 13459082 13459274 -76045279 - MER58A DNA MER1_type -2 222 1 315 258 115 60 chr17 13459274 13459420 -76045133 - MLT1J2 LTR MaLR -143 307 101 2350 99 3 0 chr17 13461342 13461645 -76042908 - AluSp SINE Alu -9 304 1 1837 83 25 8 chr17 13462448 13462689 -76041864 - AluSg SINE Alu -18 292 48 1426 164 0 0 chr17 13462812 13463032 -76041521 + AluJo SINE Alu 82 301 -11 2207 101 13 7 chr17 13463032 13463330 -76041223 + AluSq SINE Alu 1 300 -13 713 292 33 21 chr17 13464397 13464637 -76039916 - MIR SINE MIR 0 262 20 501 307 23 28 chr17 13465431 13465607 -76038946 - L3 LINE CR1 -405 1172 998 2276 109 0 0 chr17 13465895 13466189 -76038364 + AluY SINE Alu 1 294 -17 2291 113 7 0 chr17 13466452 13466762 -76037791 + AluSx SINE Alu 1 312 0 2426 89 0 0 chr17 13467371 13467675 -76036878 - AluSg SINE Alu -6 304 1 289 289 18 35 chr17 13469462 13469576 -76034977 - MIR SINE MIR -98 164 53 2377 96 0 0 chr17 13469839 13470142 -76034411 + AluSq SINE Alu 1 303 -10 216 333 56 21 chr17 13470175 13470319 -76034234 - MIR SINE MIR -16 246 98 320 299 6 0 chr17 13471314 13471491 -76033062 + (CA)n Simple_repeat Simple_repeat 1 178 0 456 244 8 17 chr17 13471702 13471821 -76032732 - MER94 DNA DNA -6 128 11 375 235 0 0 chr17 13471821 13471919 -76032634 + (TA)n Simple_repeat Simple_repeat 2 99 0 3238 84 7 28 chr17 13472725 13472792 -76031761 - L1PB2 LINE L1 -2 6149 6082 2365 100 0 0 chr17 13472792 13473101 -76031452 - AluY SINE Alu -2 309 1 3238 84 7 28 chr17 13473101 13473497 -76031056 - L1PB2 LINE L1 -69 6082 5696 2313 104 3 0 chr17 13473607 13473904 -76030649 - AluSp SINE Alu -15 298 1 2315 83 0 7 chr17 13474296 13474597 -76029956 + AluSx SINE Alu 5 303 -9 2248 98 0 3 chr17 13475443 13475738 -76028815 - AluSx SINE Alu -18 294 1 212 278 0 0 chr17 13475916 13475970 -76028583 - MIR SINE MIR -111 151 98 2381 89 0 19 chr17 13476350 13476665 -76027888 - AluSq SINE Alu -4 309 1 186 43 0 0 chr17 13477241 13477264 -76027289 + (CAG)n Simple_repeat Simple_repeat 1 23 0 1723 182 15 12 chr17 13477503 13477832 -76026721 - MER44D DNA MER2_type -8 601 2 2441 66 3 20 chr17 13478046 13478375 -76026178 - AluSp SINE Alu 0 313 1 670 214 96 45 chr17 13479110 13479288 -76025265 - MSTD LTR MaLR 0 396 210 2336 100 3 0 chr17 13479594 13479894 -76024659 - AluSx SINE Alu -11 301 1 25 0 0 0 chr17 13479900 13479925 -76024628 + AT_rich Low_complexity Low_complexity 1 25 0 184 366 87 37 chr17 13479955 13480116 -76024437 - MIR SINE MIR -74 188 20 887 184 40 67 chr17 13480699 13480750 -76023803 + L1MC5 LINE L1 7535 7586 -375 2259 111 7 0 chr17 13480750 13481057 -76023496 + AluSc SINE Alu 1 309 0 887 184 40 67 chr17 13481057 13481407 -76023146 + L1MC5 LINE L1 7586 7925 -36 24 32 0 0 chr17 13481994 13482025 -76022528 + AT_rich Low_complexity Low_complexity 1 31 0 2219 98 3 3 chr17 13482113 13482399 -76022154 + AluSx SINE Alu 1 286 -26 362 175 12 0 chr17 13482401 13482481 -76022072 + (TA)n Simple_repeat Simple_repeat 1 81 0 253 311 0 0 chr17 13482495 13482585 -76021968 + L1MC4 LINE L1 6614 6703 -1339 * 264 255 0 43 chr17 13482513 13482607 -76021946 - L1MC4 LINE L1 -1339 6703 6614 2227 44 44 0 chr17 13482709 13483003 -76021550 - AluY SINE Alu 0 306 1 557 144 31 0 chr17 13483133 13483230 -76021323 - MER5A DNA MER1_type -80 109 10 2359 89 0 0 chr17 13483273 13483564 -76020989 + AluSx SINE Alu 1 291 -21 420 270 51 71 chr17 13484078 13484389 -76020164 - L1ME4a LINE L1 -110 6011 5707 529 238 122 6 chr17 13484450 13484614 -76019939 - MIR SINE MIR -28 234 52 412 208 257 0 chr17 13484702 13484846 -76019707 + MER5A DNA MER1_type 3 183 -6 206 222 16 32 chr17 13484996 13485059 -76019494 + MIR3 SINE MIR 141 202 -6 1127 232 0 0 chr17 13486398 13486622 -76017931 - MER58A DNA MER1_type 0 224 1 725 311 101 16 chr17 13486739 13486928 -76017625 - L2 LINE L2 -14 3299 3127 285 29 0 0 chr17 13486928 13486962 -76017591 + (TG)n Simple_repeat Simple_repeat 2 35 0 725 311 101 16 chr17 13486962 13486982 -76017571 - L2 LINE L2 -186 3127 3110 2378 77 3 0 chr17 13486982 13487268 -76017285 - AluSg SINE Alu -23 287 1 725 311 101 16 chr17 13487268 13487482 -76017071 - L2 LINE L2 -203 3110 2839 366 271 66 24 chr17 13487646 13487812 -76016741 - MIR SINE MIR -6 256 84 1317 120 5 5 chr17 13488195 13488379 -76016174 + AluSg SINE Alu 1 184 -126 644 98 0 0 chr17 13488379 13488461 -76016092 + AluSg SINE Alu 53 134 -176 2164 118 10 0 chr17 13488461 13488767 -76015786 + AluSg SINE Alu 1 309 -1 746 93 0 0 chr17 13489482 13489589 -76014964 + AluSg/x SINE Alu 201 307 -3 2257 105 10 0 chr17 13490354 13490660 -76013893 - AluSx SINE Alu -3 309 1 195 228 217 43 chr17 13491286 13491378 -76013175 + MIR SINE MIR 44 151 -111 2308 119 3 0 chr17 13491633 13491943 -76012610 + AluSq SINE Alu 1 311 -2 265 337 61 17 chr17 13492141 13492322 -76012231 + MER102a DNA MER1_type 127 315 -15 2696 172 12 10 chr17 13492909 13493404 -76011149 + L1MB3 LINE L1 5688 6183 0 190 357 70 6 chr17 13494094 13494251 -76010302 - L2 LINE L2 -1089 2225 2059 232 343 0 0 chr17 13494278 13494348 -76010205 - L2 LINE L2 -85 3228 3159 * 751 319 202 30 chr17 13494343 13494454 -76010099 - L2 LINE L2 -1789 1525 1434 429 20 0 0 chr17 13494454 13494504 -76010049 + (CA)n Simple_repeat Simple_repeat 1 50 0 2372 63 0 3 chr17 13494504 13494789 -76009764 - AluSc SINE Alu -25 284 1 751 319 202 30 chr17 13494789 13495858 -76008695 - L2 LINE L2 -1879 1435 141 271 275 25 0 chr17 13498385 13498465 -76006088 + (TA)n Simple_repeat Simple_repeat 2 83 0 380 217 0 29 chr17 13499818 13499956 -76004597 + GA-rich Low_complexity Low_complexity 3 136 0 38 75 0 0 chr17 13501755 13501835 -76002718 + AT_rich Low_complexity Low_complexity 1 80 0 688 274 26 22 chr17 13501847 13502077 -76002476 - MIR SINE MIR -31 231 1 828 283 108 40 chr17 13502433 13502832 -76001721 - MLT1K LTR MaLR -153 435 10 234 326 18 80 chr17 13502981 13503205 -76001348 - L2 LINE L2 -212 3060 2851 1412 160 54 164 chr17 13503206 13503236 -76001317 - MLT1B LTR MaLR -11 379 347 2111 92 64 0 chr17 13503236 13503518 -76001035 + AluSg SINE Alu 1 300 -10 1412 160 54 164 chr17 13503518 13503785 -76000768 - MLT1B LTR MaLR -43 347 139 2225 106 3 0 chr17 13503785 13504106 -76000447 - AluSp SINE Alu 0 322 1 1412 160 54 164 chr17 13504106 13504232 -76000321 - MLT1B LTR MaLR -251 139 1 276 365 27 20 chr17 13504243 13504391 -76000162 - L2 LINE L2 -492 2822 2674 2253 106 0 0 chr17 13504536 13504828 -75999725 + AluSx SINE Alu 1 292 -20 395 322 180 35 chr17 13504894 13506325 -75998228 - L2 LINE L2 -733 2581 943 1575 85 0 5 chr17 13506517 13506717 -75997836 + AluSc SINE Alu 100 298 -11 4492 125 11 0 chr17 13506722 13507388 -75997165 + L1PA16 LINE L1 5485 6157 -9 2296 99 3 0 chr17 13507626 13507918 -75996635 + AluSp SINE Alu 1 293 -20 316 295 96 58 chr17 13508972 13509084 -75995469 - L1M4 LINE L1 -2920 3226 3120 2327 111 0 0 chr17 13509084 13509390 -75995163 - AluSp SINE Alu -7 306 1 316 295 96 58 chr17 13509390 13509640 -75994913 - L1M4 LINE L1 -3026 3120 2850 2223 243 27 91 chr17 13509675 13510603 -75993950 - L1ME3A LINE L1 -22 6148 5280 2188 116 0 13 chr17 13510604 13510915 -75993638 - AluSx SINE Alu -5 307 1 372 200 0 0 chr17 13510936 13511016 -75993537 + (CA)n Simple_repeat Simple_repeat 2 81 0 601 0 56 0 chr17 13511016 13511105 -75993448 + (TCTA)n Simple_repeat Simple_repeat 4 97 0 1764 123 46 39 chr17 13511105 13511389 -75993164 - AluJb SINE Alu -22 290 5 511 212 37 69 chr17 13511450 13511483 -75993070 - L1ME3A LINE L1 -908 5238 5205 1642 167 9 49 chr17 13511483 13511807 -75992746 - AluJb SINE Alu -1 311 1 511 212 37 69 chr17 13511807 13511990 -75992563 - L1ME3A LINE L1 -941 5205 5029 237 324 45 0 chr17 13512024 13512135 -75992418 - HAL1 LINE L1 -815 1692 1577 1494 113 137 16 chr17 13512412 13512698 -75991855 - AluSg1 SINE Alu 0 316 1 254 280 42 49 chr17 13512922 13513065 -75991488 - HAL1 LINE L1 -1398 1109 968 348 290 140 21 chr17 13513172 13513365 -75991188 + MIR SINE MIR 19 234 -28 2262 114 3 0 chr17 13513923 13514220 -75990333 + AluSq SINE Alu 1 298 -15 2475 75 0 3 chr17 13514338 13514643 -75989910 - AluY SINE Alu -7 304 1 712 312 51 26 chr17 13514647 13515102 -75989451 + L1ME LINE L1 5272 5739 -382 301 342 26 33 chr17 13515272 13515324 -75989229 - L1M4 LINE L1 -2373 3773 3722 2165 110 7 7 chr17 13515324 13515625 -75988928 - AluSx SINE Alu -11 301 1 301 342 26 33 chr17 13515625 13515844 -75988709 - L1M4 LINE L1 -2424 3722 3504 2324 105 0 3 chr17 13515929 13516242 -75988311 + AluSx SINE Alu 1 312 0 477 280 50 20 chr17 13516573 13516773 -75987780 - MLT1H LTR MaLR -287 262 57 2209 138 3 34 chr17 13517198 13517462 -75987091 + MER7A DNA MER2_type 1 251 -2787 2370 98 0 0 chr17 13517462 13517759 -75986794 - AluSx SINE Alu -15 297 1 2209 138 3 34 chr17 13517759 13517850 -75986703 + MER7A DNA MER2_type 251 343 -3 830 214 96 5 chr17 13517877 13518064 -75986489 + MER3 DNA MER1_type 1 204 -5 254 295 0 13 chr17 13518201 13518279 -75986274 - MLT1I LTR MaLR -275 134 58 227 246 31 15 chr17 13518310 13518375 -75986178 + CT-rich Low_complexity Low_complexity 3 68 0 242 215 200 0 chr17 13518858 13518923 -75985630 - MLT1I LTR MaLR 0 409 332 356 273 15 45 chr17 13518977 13519109 -75985444 - MLT1I LTR MaLR -197 212 85 992 182 0 76 chr17 13519657 13519801 -75984752 + MER3 DNA MER1_type 2 125 -84 4766 61 30 71 chr17 13519801 13520475 -75984078 - L1PA8 LINE L1 -2 6170 5525 992 182 0 76 chr17 13520475 13520555 -75983998 + MER3 DNA MER1_type 125 209 0 246 286 0 0 chr17 13521125 13521195 -75983358 - MIR SINE MIR -123 139 70 2397 90 0 0 chr17 13521329 13521639 -75982914 - AluSg SINE Alu 0 310 1 424 353 74 23 chr17 13524770 13525028 -75979525 + L2 LINE L2 2686 2956 -358 299 330 142 28 chr17 13525913 13526131 -75978422 + MIR SINE MIR 15 257 -5 376 313 30 0 chr17 13526193 13526292 -75978261 - L2 LINE L2 -20 3293 3192 2425 74 0 0 chr17 13526292 13526591 -75977962 + AluSx SINE Alu 1 299 -13 219 288 41 41 chr17 13526631 13526704 -75977849 + L2 LINE L2 3107 3179 -93 711 253 134 17 chr17 13528857 13529003 -75975550 - L1ME4a LINE L1 -6 6115 5987 279 0 0 0 chr17 13529003 13529034 -75975519 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 711 253 134 17 chr17 13529034 13529179 -75975374 - L1ME4a LINE L1 -134 5987 5790 349 232 0 53 chr17 13529213 13529308 -75975245 - L1ME4a LINE L1 -449 5672 5583 553 174 11 11 chr17 13529336 13529428 -75975125 - FRAM SINE Alu -84 92 1 2315 90 0 29 chr17 13529460 13529771 -75974782 - AluY SINE Alu -9 302 1 306 260 87 91 chr17 13530655 13531140 -75973413 - L1ME4a LINE L1 -1587 4559 4077 183 323 240 0 chr17 13531320 13531416 -75973137 - L2 LINE L2 -4 3309 3191 272 263 207 34 chr17 13531433 13531790 -75972763 - L1ME4a LINE L1 -2301 3845 3427 518 266 39 98 chr17 13532111 13532416 -75972137 - MLT1I LTR MaLR -7 402 116 1761 105 4 0 chr17 13532566 13532795 -75971758 - AluSq SINE Alu -83 230 1 423 294 9 0 chr17 13532880 13532989 -75971564 + MIR SINE MIR 151 260 -2 285 200 14 14 chr17 13533222 13533292 -75971261 - MLT1I LTR MaLR 0 409 340 255 262 60 48 chr17 13533369 13533453 -75971100 - MLT1I LTR MaLR -197 212 128 300 325 16 13 chr17 13533521 13533683 -75970870 - MIR SINE MIR -34 228 68 275 341 60 33 chr17 13534215 13534397 -75970156 - MIR SINE MIR -74 188 2 397 259 176 46 chr17 13534421 13534745 -75969808 + L1ME4a LINE L1 5734 6099 -22 344 176 15 15 chr17 13535089 13535157 -75969396 - LTR67 LTR ERVL -3 554 487 2033 146 0 19 chr17 13535616 13535794 -75968759 - AluSx SINE Alu -3 309 129 387 0 0 0 chr17 13535794 13535837 -75968716 + (TA)n Simple_repeat Simple_repeat 2 44 0 2412 73 10 7 chr17 13535837 13536138 -75968415 - AluSx SINE Alu -10 302 1 2033 146 0 19 chr17 13536138 13536273 -75968280 - AluSx SINE Alu -181 131 1 608 211 0 9 chr17 13536382 13536491 -75968062 - FRAM SINE Alu -30 146 39 396 157 56 22 chr17 13536701 13536790 -75967763 - MER103 DNA DNA -23 143 52 385 267 120 42 chr17 13536800 13536991 -75967562 - MLT1L LTR MaLR 0 615 410 370 274 28 78 chr17 13537221 13537400 -75967153 - MLT1L LTR MaLR -438 177 8 191 211 0 105 chr17 13537699 13537756 -75966797 + L2 LINE L2 3214 3264 -8 187 287 108 39 chr17 13538086 13538215 -75966338 + L2 LINE L2 3102 3239 -33 1230 253 119 13 chr17 13538572 13538951 -75965602 - LTR16A LTR ERVL -6 444 26 289 228 193 18 chr17 13539282 13539396 -75965157 + MER94 DNA DNA 1 134 0 570 301 7 13 chr17 13539485 13539638 -75964915 + MIR SINE MIR 15 166 -96 1782 182 21 52 chr17 13539638 13540023 -75964530 - MER93b LTR ERV1 0 373 1 2833 115 0 6 chr17 13540236 13540602 -75963951 - THE1B LTR MaLR 0 364 1 10973 112 32 34 chr17 13540602 13542186 -75962367 - THE1B-int LTR MaLR 0 1580 1 2557 103 54 14 chr17 13542186 13542536 -75962017 - THE1B LTR MaLR 0 364 1 859 194 11 12 chr17 13543049 13543220 -75961333 - MLT1C LTR MaLR 0 507 307 1070 270 67 47 chr17 13543227 13543657 -75960896 + MER21B LTR ERV1 19 457 -406 2726 127 39 7 chr17 13543662 13543897 -75960656 - Tigger2 DNA MER2_type 0 2718 2461 2562 57 0 16 chr17 13543897 13544213 -75960340 + AluY SINE Alu 1 311 0 2726 127 39 7 chr17 13544213 13544409 -75960144 - Tigger2 DNA MER2_type -257 2461 2273 473 159 0 0 chr17 13544398 13544467 -75960086 - Tigger2 DNA MER2_type -2649 69 1 * 394 246 55 0 chr17 13544473 13544583 -75959970 + MER21B LTR ERV1 624 739 -124 916 244 68 24 chr17 13544604 13544899 -75959654 - MLT1C LTR MaLR -156 311 4 303 247 68 89 chr17 13544921 13545067 -75959486 - L2 LINE L2 -6 3266 3124 221 329 0 0 chr17 13546343 13546419 -75958134 + (TA)n Simple_repeat Simple_repeat 2 77 0 2532 66 0 0 chr17 13547102 13547407 -75957146 - AluSx SINE Alu -7 305 1 236 241 89 36 chr17 13548430 13548542 -75956011 - MIR SINE MIR -117 145 28 290 234 113 32 chr17 13549328 13549452 -75955101 + L1M4 LINE L1 4162 4295 -1851 7780 242 77 23 chr17 13549458 13550151 -75954402 + L1M4 LINE L1 2314 2968 -3178 740 105 30 75 chr17 13550151 13550284 -75954269 + L1MA3 LINE L1 6179 6305 0 7780 242 77 23 chr17 13550284 13552041 -75952512 + L1M4 LINE L1 2968 4896 -1250 2211 241 78 20 chr17 13552042 13553107 -75951446 - L1ME2 LINE L1 -236 5928 4794 455 113 0 0 chr17 13553110 13553181 -75951372 - L1MA5A LINE L1 -1 6296 6226 21 36 0 0 chr17 13553185 13553213 -75951340 + AT_rich Low_complexity Low_complexity 1 28 0 187 313 156 21 chr17 13553389 13553485 -75951068 - L2 LINE L2 -28 3244 3136 1134 236 164 0 chr17 13554975 13555267 -75949286 - MER58B DNA MER1_type -1 340 1 1070 321 132 43 chr17 13556050 13557084 -75947469 + L2 LINE L2 1129 2253 -1061 654 254 36 6 chr17 13557141 13557306 -75947247 - L2 LINE L2 -572 2742 2573 398 315 55 65 chr17 13557452 13557914 -75946639 + L2 LINE L2 2649 3114 -199 1922 142 3 7 chr17 13557914 13558203 -75946350 - AluJb SINE Alu -24 288 1 398 315 55 65 chr17 13558203 13558238 -75946315 + L2 LINE L2 3114 3148 -165 2139 144 76 30 chr17 13558238 13558276 -75946277 - MLT2D LTR ERVL 0 414 379 246 32 0 0 chr17 13558276 13558307 -75946246 + (TG)n Simple_repeat Simple_repeat 1 31 0 2139 144 76 30 chr17 13558307 13558664 -75945889 - MLT2D LTR ERVL -35 379 1 398 315 55 65 chr17 13558664 13558759 -75945794 + L2 LINE L2 3148 3309 -4 1393 91 17 65 chr17 13558931 13559163 -75945390 - L1PA13 LINE L1 -4 6159 5939 237 269 69 35 chr17 13560240 13560385 -75944168 + L1M4 LINE L1 3671 3820 -2326 1828 104 40 0 chr17 13560668 13560917 -75943636 + AluSx SINE Alu 46 304 -8 272 173 49 62 chr17 13560953 13561034 -75943519 + MER116 DNA Mariner 1 80 0 648 282 118 66 chr17 13561034 13561496 -75943057 - L1ME2 LINE L1 -1917 4229 3722 2427 75 0 28 chr17 13561496 13561816 -75942737 - AluY SINE Alu 0 311 1 648 282 118 66 chr17 13561816 13562006 -75942547 - L1ME2 LINE L1 -2424 3722 3543 701 304 140 22 chr17 13562475 13562876 -75941677 + L2 LINE L2 2865 3312 -1 405 296 22 37 chr17 13563443 13563578 -75940975 + MIR3 SINE MIR 50 182 -26 413 270 158 23 chr17 13563956 13564171 -75940382 - MIR SINE MIR -16 246 3 2598 197 71 47 chr17 13564208 13564853 -75939700 - MER67B LTR ERV1 0 661 1 476 141 0 59 chr17 13564853 13564893 -75939660 - MER67A LTR ERV1 -463 80 46 3859 162 5 70 chr17 13564893 13565632 -75938921 - LTR8 LTR ERV1 0 691 1 476 141 0 59 chr17 13565632 13565676 -75938877 - MER67A LTR ERV1 -497 46 1 3044 149 39 16 chr17 13566433 13567019 -75937534 - MER4B LTR ERV1 0 779 3 550 111 0 81 chr17 13567309 13567408 -75937145 + AluJ/FRAM SINE Alu 222 312 0 230 170 0 21 chr17 13567535 13567582 -75936971 - L2 LINE L2 -78 3235 3190 21 0 0 0 chr17 13568484 13568505 -75936048 + AT_rich Low_complexity Low_complexity 1 21 0 3506 121 22 15 chr17 13568505 13569043 -75935510 - L1MB2 LINE L1 -7 6164 5623 2735 217 39 24 chr17 13569147 13569232 -75935321 + L1M4 LINE L1 2314 2396 -3750 2259 104 0 29 chr17 13569232 13569548 -75935005 + AluSx SINE Alu 1 307 -5 2735 217 39 24 chr17 13569548 13570176 -75934377 + L1M4 LINE L1 2396 3038 -3108 784 114 0 0 chr17 13570176 13570281 -75934272 + L1MA3 LINE L1 6194 6298 -7 390 318 62 47 chr17 13570320 13570594 -75933959 + L3 LINE CR1 223 500 -1077 1927 119 0 107 chr17 13571537 13571873 -75932680 - AluSq SINE Alu -3 300 1 23 0 0 0 chr17 13573024 13573047 -75931506 + AT_rich Low_complexity Low_complexity 1 23 0 220 276 52 0 chr17 13573995 13574053 -75930500 + MER91 DNA MER1_type 127 187 -3 1518 166 72 8 chr17 13574183 13574448 -75930105 + AluSx SINE Alu 1 282 -30 423 52 0 0 chr17 13574461 13574519 -75930034 + (CA)n Simple_repeat Simple_repeat 1 58 0 395 270 87 0 chr17 13574536 13574651 -75929902 + MIR SINE MIR 26 150 -112 304 203 14 14 chr17 13574652 13574721 -75929832 - MER69 DNA AcHobo -2 2524 2456 253 245 326 0 chr17 13574921 13575019 -75929534 - MER5B DNA MER1_type -3 175 46 1692 143 7 22 chr17 13575039 13575311 -75929242 + AluJb SINE Alu 45 312 0 823 181 163 0 chr17 13575383 13575543 -75929010 - MER5A DNA MER1_type -2 187 2 1788 249 45 79 chr17 13576237 13576518 -75928035 - L1ME LINE L1 -5242 828 539 2146 125 3 3 chr17 13576518 13576823 -75927730 - AluSx SINE Alu -7 305 1 1788 249 45 79 chr17 13576823 13577041 -75927512 - L1ME LINE L1 -5531 539 315 2006 208 26 0 chr17 13577041 13577425 -75927128 - MSTD LTR MaLR -2 394 1 1788 249 45 79 chr17 13577425 13577776 -75926777 - L1ME LINE L1 -5755 315 6 262 344 40 55 chr17 13577950 13578094 -75926459 + L2 LINE L2 3038 3178 -135 2445 89 0 0 chr17 13578094 13578397 -75926156 + AluSc SINE Alu 1 303 -6 262 344 40 55 chr17 13578397 13578505 -75926048 + L2 LINE L2 3178 3286 -27 2400 31 41 14 chr17 13580379 13580671 -75923882 - AluY SINE Alu -11 300 1 187 184 61 0 chr17 13581525 13581574 -75922979 + L2 LINE L2 3182 3233 -80 2408 77 3 3 chr17 13581632 13581931 -75922622 + AluSp SINE Alu 1 299 -14 234 0 0 0 chr17 13582435 13582461 -75922092 + (T)n Simple_repeat Simple_repeat 1 26 0 297 324 35 35 chr17 13582987 13583132 -75921421 - MIR3 SINE MIR -7 201 57 193 272 39 107 chr17 13583470 13583573 -75920980 + L2 LINE L2 15 110 -3204 495 224 65 0 chr17 13583612 13583719 -75920834 + L2 LINE L2 3200 3313 0 231 312 142 7 chr17 13583804 13583945 -75920608 + MIR3 SINE MIR 45 204 -4 1917 78 127 4 chr17 13584333 13584601 -75919952 - AluSp SINE Alu -2 301 1 440 284 31 67 chr17 13585210 13585415 -75919138 - L1M4 LINE L1 -2841 3305 3109 2363 79 7 0 chr17 13585415 13585707 -75918846 - AluY SINE Alu -17 294 1 440 284 31 67 chr17 13585707 13585755 -75918798 - L1M4 LINE L1 -3037 3109 3061 1168 138 58 26 chr17 13585828 13586149 -75918404 - MLT2A2 LTR ERVL -1 452 205 304 370 86 19 chr17 13587276 13587533 -75917020 + L1MC4a LINE L1 5660 5933 -1875 2508 81 3 0 chr17 13587543 13587852 -75916701 + AluSp SINE Alu 1 310 -3 428 121 15 15 chr17 13588042 13588108 -75916445 + FLAM SINE Alu 55 120 -23 207 100 0 0 chr17 13588111 13588141 -75916412 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 238 193 70 0 chr17 13588165 13588222 -75916331 - L1 LINE L1 -885 5261 5201 600 281 115 5 chr17 13589481 13589698 -75914855 + MIR SINE MIR 5 245 -17 1031 209 94 94 chr17 13590099 13590473 -75914080 - MSTD LTR MaLR -4 392 19 432 0 0 0 chr17 13590632 13590680 -75913873 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 180 250 0 135 chr17 13591256 13591352 -75913201 + L3 LINE CR1 1472 1554 -23 2021 182 70 22 chr17 13591472 13591604 -75912949 + MLT1C LTR MaLR 3 127 -340 2372 117 45 28 chr17 13591604 13591962 -75912591 - THE1B LTR MaLR 0 364 1 2021 182 70 22 chr17 13591962 13592273 -75912280 + MLT1C LTR MaLR 127 467 0 1226 254 61 80 chr17 13592547 13593086 -75911467 - MER74A LTR ERVL -29 529 1 233 158 0 26 chr17 13593383 13593421 -75911132 + Alu SINE Alu 85 121 -181 536 336 137 0 chr17 13593489 13593700 -75910853 + MLT1K LTR MaLR 3 242 -346 2036 139 20 0 chr17 13593720 13594022 -75910531 - AluSx SINE Alu -4 308 1 821 156 7 15 chr17 13594022 13594157 -75910396 - AluSq/x SINE Alu -178 135 2 2194 164 28 89 chr17 13594162 13594511 -75910042 - MLT1D LTR MaLR 0 505 199 2155 110 21 0 chr17 13594511 13594801 -75909752 - AluSx SINE Alu -16 296 1 2194 164 28 89 chr17 13594801 13594989 -75909564 - MLT1D LTR MaLR -306 199 1 473 297 171 24 chr17 13594989 13595235 -75909318 + MLT1K LTR MaLR 237 518 -70 187 220 0 60 chr17 13595439 13595489 -75909064 + MIR3 SINE MIR 108 154 -54 1771 133 68 31 chr17 13595579 13595872 -75908681 + AluJb SINE Alu 1 304 -8 901 140 0 22 chr17 13595872 13596008 -75908545 + FLAM_C SINE Alu 1 133 0 38 0 0 0 chr17 13596008 13596046 -75908507 + AT_rich Low_complexity Low_complexity 1 38 0 283 385 44 7 chr17 13596046 13596181 -75908372 - MIR3 SINE MIR -39 169 30 23 0 0 0 chr17 13596353 13596376 -75908177 + AT_rich Low_complexity Low_complexity 1 23 0 995 244 160 6 chr17 13596607 13597046 -75907507 - MLT1G1 LTR MaLR -8 587 1 302 323 97 26 chr17 13597986 13598181 -75906372 + HAL1 LINE L1 1391 1599 -908 2519 69 3 0 chr17 13598374 13598678 -75905875 + AluY SINE Alu 1 305 -6 928 224 126 85 chr17 13599377 13599917 -75904636 - MER34B LTR ERV1 -3 562 1 1961 176 29 13 chr17 13600910 13601291 -75903262 - MLT1B LTR MaLR -3 387 1 391 86 14 14 chr17 13601444 13601514 -75903039 + (TA)n Simple_repeat Simple_repeat 2 71 0 2305 89 3 10 chr17 13601514 13601817 -75902736 - AluSg SINE Alu -5 305 5 25 31 0 0 chr17 13601820 13601852 -75902701 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr17 13602293 13602319 -75902234 + AT_rich Low_complexity Low_complexity 1 26 0 1058 171 25 20 chr17 13602323 13602522 -75902031 - L1MB3 LINE L1 -12 6171 5972 225 243 208 7 chr17 13602593 13602737 -75901816 - L1ME4a LINE L1 -106 6015 5843 1770 164 34 10 chr17 13602915 13603208 -75901345 - AluJo SINE Alu -12 300 1 526 244 24 0 chr17 13603241 13603368 -75901185 - L1ME4a LINE L1 -513 5608 5479 441 276 55 62 chr17 13603379 13603669 -75900884 - HAL1 LINE L1 -10 2497 2210 352 252 0 37 chr17 13603774 13603881 -75900672 + T-rich Low_complexity Low_complexity 4 106 0 2839 116 7 30 chr17 13604060 13604200 -75900353 + MSTA LTR MaLR 1 143 -285 2305 142 131 8 chr17 13604200 13604581 -75899972 - MSTA LTR MaLR 0 428 1 2839 116 7 30 chr17 13604581 13604878 -75899675 + MSTA LTR MaLR 143 428 0 324 274 177 23 chr17 13605278 13605544 -75899009 - HAL1 LINE L1 -776 1731 1425 205 302 52 42 chr17 13606137 13606233 -75898320 + L2 LINE L2 2967 3063 -209 2178 115 0 19 chr17 13606482 13606841 -75897712 + AluSx SINE Alu 1 312 0 469 279 66 35 chr17 13606975 13607184 -75897369 - MLT1L LTR MaLR -202 309 112 2179 119 0 3 chr17 13607317 13607611 -75896942 + AluSq SINE Alu 3 295 -18 1036 168 40 6 chr17 13607940 13608113 -75896440 - MER5A DNA MER1_type 0 189 11 1812 159 13 10 chr17 13608179 13608481 -75896072 + AluJo SINE Alu 3 305 -7 2409 78 0 0 chr17 13608528 13608822 -75895731 + AluSq SINE Alu 1 294 -19 1311 247 93 45 chr17 13608833 13609348 -75895205 + MER74A LTR ERVL 19 558 0 2308 102 7 3 chr17 13609498 13609803 -75894750 + AluSc SINE Alu 1 306 -3 1810 51 0 0 chr17 13610414 13610628 -75893925 + AluY SINE Alu 80 293 -18 433 250 71 14 chr17 13610952 13611092 -75893461 + MER103 DNA DNA 18 165 -1 262 280 13 0 chr17 13611563 13611638 -75892915 + L3 LINE CR1 1482 1557 -20 4132 65 27 0 chr17 13611854 13612365 -75892188 - L1PB1 LINE L1 -2 6149 5625 22 35 0 0 chr17 13612492 13612521 -75892032 + AT_rich Low_complexity Low_complexity 1 29 0 231 208 0 0 chr17 13612529 13612577 -75891976 - LTR66 LTR ERVL -169 441 394 1141 161 95 0 chr17 13612624 13612835 -75891718 - Tigger2a DNA MER2_type -22 422 192 432 147 0 15 chr17 13612837 13612905 -75891648 - Tigger2a DNA MER2_type -334 100 34 516 322 68 39 chr17 13613313 13613980 -75890573 - L1ME3A LINE L1 -219 5951 5266 1107 264 117 81 chr17 13614120 13614551 -75890002 - L1ME3A LINE L1 -1082 5064 4650 1414 199 16 32 chr17 13614551 13614867 -75889686 - AluJo SINE Alu -1 311 1 1107 264 117 81 chr17 13614867 13616311 -75888242 - L1ME3A LINE L1 -1496 4650 3121 291 287 188 31 chr17 13616370 13617116 -75887437 - L1ME3A LINE L1 -3144 3002 2140 4133 235 85 29 chr17 13617396 13617760 -75886793 - L1ME1 LINE L1 0 6560 6218 2220 100 0 0 chr17 13617760 13618064 -75886489 - AluSg SINE Alu 0 305 2 4133 235 85 29 chr17 13618064 13618191 -75886362 - L1ME1 LINE L1 -342 6218 6099 252 0 0 0 chr17 13618191 13618219 -75886334 + (TG)n Simple_repeat Simple_repeat 2 29 0 4133 235 85 29 chr17 13618219 13618390 -75886163 - L1ME1 LINE L1 -461 6099 5939 249 57 0 0 chr17 13618390 13618425 -75886128 + (TG)n Simple_repeat Simple_repeat 2 36 0 4133 235 85 29 chr17 13618425 13620037 -75884516 - L1ME1 LINE L1 -621 5939 4153 186 103 0 0 chr17 13620087 13620116 -75884437 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 1444 176 10 52 chr17 13620116 13620406 -75884147 - AluJb SINE Alu -34 278 1 4024 229 73 35 chr17 13620408 13622115 -75882438 - L1ME1 LINE L1 -2391 4149 2387 1497 201 134 9 chr17 13622115 13622458 -75882095 - MSTD LTR MaLR 0 396 11 6634 227 78 50 chr17 13622468 13624154 -75880399 - MSTD-int LTR MaLR 0 1735 3 1519 254 46 6 chr17 13624157 13624523 -75880030 - MSTD LTR MaLR -13 383 3 413 178 0 0 chr17 13624539 13624612 -75879941 - L1ME1 LINE L1 -4191 2349 2277 6574 205 85 66 chr17 13624615 13624665 -75879888 - L1ME1 LINE L1 -4475 2065 2017 2107 93 24 10 chr17 13624665 13624956 -75879597 - AluSx SINE Alu -17 295 1 6574 205 85 66 chr17 13624956 13626930 -75877623 - L1ME1 LINE L1 -4523 2017 1 252 188 0 0 chr17 13627073 13627142 -75877411 + (TG)n Simple_repeat Simple_repeat 2 70 0 282 95 0 0 chr17 13627152 13627194 -75877359 + (GA)n Simple_repeat Simple_repeat 2 43 0 950 118 0 0 chr17 13627890 13628026 -75876527 + AluSc SINE Alu 174 309 0 1257 55 0 0 chr17 13628267 13628432 -75876121 - L1PA5 LINE L1 -709 5445 5281 5913 50 3 13 chr17 13628436 13629140 -75875413 + L1PA5 LINE L1 5458 6154 0 180 0 0 0 chr17 13630577 13630597 -75873956 + (T)n Simple_repeat Simple_repeat 1 20 0 1940 185 143 17 chr17 13630863 13631333 -75873220 - MER74A LTR ERVL -27 531 3 305 274 0 0 chr17 13631458 13631531 -75873022 - MLT1L LTR MaLR -221 394 322 226 125 0 0 chr17 13631574 13631606 -75872947 - LTR67 LTR ERVL -418 139 108 2294 89 0 0 chr17 13631823 13632135 -75872418 - AluSc SINE Alu 0 312 1 2347 101 3 0 chr17 13632985 13633293 -75871260 - AluSg SINE Alu -1 309 1 422 326 130 47 chr17 13633455 13633780 -75870773 - L2 LINE L2 -6 3266 2969 2464 93 0 7 chr17 13633780 13634090 -75870463 - AluSq SINE Alu -5 308 1 422 326 130 47 chr17 13634090 13634487 -75870066 - L2 LINE L2 -303 2969 2466 234 350 21 14 chr17 13634512 13634655 -75869898 - L2 LINE L2 -1105 2209 2066 634 309 112 26 chr17 13634670 13635351 -75869202 + L2 LINE L2 2424 3165 -148 573 303 27 27 chr17 13635551 13635772 -75868781 + MIR SINE MIR 31 251 -11 482 0 17 0 chr17 13635950 13636008 -75868545 + (GA)n Simple_repeat Simple_repeat 1 59 0 414 0 0 0 chr17 13636007 13636053 -75868500 + (TG)n Simple_repeat Simple_repeat 2 47 0 * 21 0 0 0 chr17 13636451 13636472 -75868081 + AT_rich Low_complexity Low_complexity 1 21 0 1713 50 5 0 chr17 13636472 13636671 -75867882 - L1PB1 LINE L1 -4 6147 5948 2196 95 7 13 chr17 13636966 13637272 -75867281 - AluSc SINE Alu -5 304 1 285 279 17 78 chr17 13637399 13637578 -75866975 + L1MC4a LINE L1 5747 5914 -1894 2090 95 0 41 chr17 13637764 13638058 -75866495 - AluSg SINE Alu -8 302 21 1380 153 24 5 chr17 13638798 13639007 -75865546 - MER20 DNA MER1_type -3 216 4 1884 173 76 31 chr17 13639094 13639476 -75865077 - MER21B LTR ERV1 -53 810 412 1921 165 0 16 chr17 13639519 13639835 -75864718 + AluJo SINE Alu 1 311 -1 3342 191 78 21 chr17 13640211 13640968 -75863585 - L1MB5 LINE L1 -26 6148 5349 2325 92 0 25 chr17 13641054 13641371 -75863182 - AluSq SINE Alu -4 309 1 523 288 111 73 chr17 13641993 13642702 -75861851 + L1MEd LINE L1 915 1650 -4880 298 316 111 16 chr17 13642725 13642978 -75861575 + HAL1 LINE L1 1370 1646 -861 741 157 69 100 chr17 13643139 13643313 -75861240 - MER34B LTR ERV1 -19 546 381 2096 106 11 0 chr17 13643313 13643595 -75860958 - AluSx SINE Alu -10 302 18 741 157 69 100 chr17 13643595 13643681 -75860872 - MER34B LTR ERV1 -184 381 294 337 275 105 78 chr17 13643712 13644083 -75860470 + L1MEd LINE L1 2253 2633 -3907 4188 251 88 59 chr17 13644121 13646010 -75858543 + HAL1 LINE L1 11 1954 -553 24 0 0 0 chr17 13646014 13646038 -75858515 + AT_rich Low_complexity Low_complexity 1 24 0 543 230 251 15 chr17 13646164 13646490 -75858063 + HAL1 LINE L1 1971 2373 -134 522 119 0 0 chr17 13646498 13646565 -75857988 + AluS SINE Alu 1 67 -246 2138 127 0 3 chr17 13646565 13646857 -75857696 + AluSx SINE Alu 14 304 -8 299 279 165 15 chr17 13646954 13647397 -75857156 + L1MC4a LINE L1 5267 5546 -616 2343 68 0 17 chr17 13647399 13647695 -75856858 + AluSq SINE Alu 21 311 -2 1371 160 0 0 chr17 13647899 13648124 -75856429 - AluSg/x SINE Alu -6 306 82 244 209 58 70 chr17 13648189 13648275 -75856278 - L1M4 LINE L1 -1574 4572 4488 2295 103 0 3 chr17 13649251 13649551 -75855002 - AluSx SINE Alu -13 299 1 1323 142 83 9 chr17 13649755 13649973 -75854580 + MER46A DNA MER2_type 2 235 -1 697 215 85 60 chr17 13649987 13650008 -75854545 + MER3 DNA MER1_type 1 20 -189 1654 184 109 121 chr17 13650008 13650569 -75853984 - MLT2B3 LTR ERVL 0 554 1 697 215 85 60 chr17 13650569 13650747 -75853806 + MER3 DNA MER1_type 20 205 -4 1584 155 21 14 chr17 13651864 13652155 -75852398 + L1MA9 LINE L1 6009 6301 -11 2373 102 0 0 chr17 13652248 13652552 -75852001 - AluSx SINE Alu -8 304 1 730 281 128 40 chr17 13652785 13652961 -75851592 - L2 LINE L2 -5 3308 3149 2508 60 3 3 chr17 13652961 13653261 -75851292 + AluY SINE Alu 1 300 -11 730 281 128 40 chr17 13653261 13653529 -75851024 - L2 LINE L2 -164 3149 2825 1896 117 0 0 chr17 13653909 13654205 -75850348 - AluSq SINE Alu 0 324 29 1450 150 0 26 chr17 13654207 13654440 -75850113 - AluJo SINE Alu -12 300 74 343 325 49 16 chr17 13654513 13654636 -75849917 + MIR SINE MIR 9 135 -127 765 278 82 28 chr17 13654913 13655301 -75849252 + MER113 DNA MER1_type? 106 514 -7 1021 73 0 0 chr17 13655570 13655693 -75848860 - AluSq SINE Alu -118 195 73 2252 81 13 32 chr17 13656075 13656383 -75848170 - AluSq SINE Alu -11 302 1 1489 181 93 34 chr17 13657423 13657776 -75846777 + MLT1B LTR MaLR 4 377 -13 2191 117 0 0 chr17 13658949 13659240 -75845313 + AluSx SINE Alu 1 291 -21 263 56 74 0 chr17 13659241 13659295 -75845258 + (TA)n Simple_repeat Simple_repeat 1 58 0 351 200 11 42 chr17 13659295 13659390 -75845163 + L1MC4 LINE L1 6612 6703 -1339 25 75 0 0 chr17 13659401 13659454 -75845099 + AT_rich Low_complexity Low_complexity 1 53 0 454 254 78 74 chr17 13660338 13660622 -75843931 + Charlie8 DNA MER1_type 1 285 -2132 21 0 0 0 chr17 13660790 13660811 -75843742 + AT_rich Low_complexity Low_complexity 1 21 0 791 127 33 104 chr17 13661257 13661469 -75843084 + L1MA7 LINE L1 6093 6289 -2 314 315 11 0 chr17 13661543 13661635 -75842918 - Charlie8 DNA MER1_type -2151 266 174 2168 127 0 13 chr17 13663088 13663404 -75841149 - AluSq SINE Alu -1 312 1 2130 121 0 0 chr17 13663918 13664238 -75840315 - AluSx SINE Alu 0 320 1 750 276 46 86 chr17 13664248 13664358 -75840195 - L1MC4a LINE L1 -1879 5929 5816 2511 59 0 10 chr17 13664358 13664665 -75839888 - AluY SINE Alu -7 304 1 750 276 46 86 chr17 13664665 13664708 -75839845 - L1MC4a LINE L1 -1992 5816 5773 351 0 0 0 chr17 13664708 13664747 -75839806 + (CA)n Simple_repeat Simple_repeat 2 40 0 750 276 46 86 chr17 13664747 13665287 -75839266 - L1MC4a LINE L1 -2035 5773 5263 362 276 122 53 chr17 13665459 13665854 -75838699 - L1MC4a LINE L1 -1086 5060 4639 2498 60 3 0 chr17 13666713 13667013 -75837540 - AluY SINE Alu -10 301 1 954 175 26 10 chr17 13667508 13667702 -75836851 + L1MC1 LINE L1 5991 6187 -146 2168 125 14 0 chr17 13668158 13668454 -75836099 + AluSx SINE Alu 1 300 -12 5135 163 19 9 chr17 13668889 13669760 -75834793 - L1MC1 LINE L1 0 6333 5454 3720 189 81 26 chr17 13669760 13670573 -75833980 - L1MCa LINE L1 -5549 877 20 306 283 118 52 chr17 13670616 13670685 -75833868 + L1 LINE L1 4300 4363 -1783 2026 110 11 0 chr17 13670685 13670949 -75833604 + AluSx SINE Alu 1 267 -45 306 283 118 52 chr17 13670949 13671222 -75833331 + L1 LINE L1 4363 4658 -1488 189 0 0 0 chr17 13671449 13671470 -75833083 + (A)n Simple_repeat Simple_repeat 1 21 0 251 269 172 21 chr17 13672125 13672218 -75832335 - L2 LINE L2 0 3272 3166 2523 74 0 3 chr17 13672321 13672632 -75831921 - AluY SINE Alu -1 310 1 1166 188 9 23 chr17 13674211 13674429 -75830124 + MER20 DNA MER1_type 1 215 -4 2160 124 0 3 chr17 13675011 13675310 -75829243 - AluSg SINE Alu -10 300 3 876 168 0 0 chr17 13675941 13676072 -75828481 - FLAM_A SINE Alu -2 131 1 2281 96 0 17 chr17 13677354 13677655 -75826898 - AluSc SINE Alu -13 296 1 216 228 0 0 chr17 13677670 13677727 -75826826 + CT-rich Low_complexity Low_complexity 2 58 0 2331 104 3 0 chr17 13677878 13678176 -75826377 - AluSx SINE Alu -13 299 1 207 0 0 0 chr17 13678647 13678670 -75825883 + (CTTAG)n Simple_repeat Simple_repeat 2 24 0 1722 123 108 0 chr17 13678670 13678925 -75825628 - AluSx SINE Alu -29 283 1 477 210 4 128 chr17 13679070 13679230 -75825323 - L1MC5 LINE L1 -126 7835 7657 964 108 15 0 chr17 13679230 13679360 -75825193 + FLAM_C SINE Alu 1 132 -1 477 210 4 128 chr17 13679360 13679383 -75825170 - L1MC5 LINE L1 -304 7657 7686 2310 95 0 7 chr17 13679383 13679677 -75824876 + AluSx SINE Alu 1 292 -20 477 210 4 128 chr17 13679677 13679735 -75824818 - L1MC5 LINE L1 -274 7687 7623 217 342 72 45 chr17 13679775 13680149 -75824404 + L2 LINE L2 1560 1943 -1371 246 309 41 10 chr17 13680511 13680608 -75823945 + L2 LINE L2 2431 2530 -784 2183 121 3 3 chr17 13681254 13681561 -75822992 + AluSx SINE Alu 1 307 -5 303 28 0 0 chr17 13681582 13681618 -75822935 + (CA)n Simple_repeat Simple_repeat 2 37 0 339 311 48 48 chr17 13681727 13681933 -75822620 - L2 LINE L2 0 3313 3108 338 382 14 14 chr17 13682637 13682923 -75821630 + L1MC/D LINE L1 5575 5856 -314 802 299 16 24 chr17 13684021 13684272 -75820281 - MIR SINE MIR 0 262 14 357 299 112 8 chr17 13684626 13684760 -75819793 - MER5B DNA MER1_type 0 178 31 1292 79 37 0 chr17 13685589 13685753 -75818800 - AluY SINE Alu -1 310 141 2525 172 60 39 chr17 13686329 13686743 -75817810 + L1MB3 LINE L1 5580 6011 -172 2126 118 0 34 chr17 13686743 13687064 -75817489 - AluSx SINE Alu -2 310 1 2525 172 60 39 chr17 13687064 13687213 -75817340 + L1MB3 LINE L1 6011 6155 -28 2685 187 35 10 chr17 13687707 13688285 -75816268 - L1MB7 LINE L1 0 6184 5593 202 277 0 0 chr17 13689321 13689368 -75815185 - MIR SINE MIR -113 149 103 225 180 0 0 chr17 13689733 13689783 -75814770 + (CA)n Simple_repeat Simple_repeat 2 51 0 2098 98 7 27 chr17 13689829 13690124 -75814429 - AluSp SINE Alu -24 289 1 230 284 90 0 chr17 13690237 13690304 -75814249 - MIR3 SINE MIR -9 199 127 320 283 54 38 chr17 13690447 13690631 -75813922 - MARNA DNA Mariner -357 229 43 237 292 131 40 chr17 13691153 13691451 -75813102 - L1M4 LINE L1 -1975 4171 3847 2363 92 7 0 chr17 13693154 13693449 -75811104 + AluSg SINE Alu 1 297 -13 2047 115 0 11 chr17 13693451 13693730 -75810823 - AluSx SINE Alu -36 276 1 2248 102 7 0 chr17 13694319 13694612 -75809941 + AluSp SINE Alu 1 295 -18 28 29 0 0 chr17 13694937 13694972 -75809581 + AT_rich Low_complexity Low_complexity 1 35 0 594 239 94 55 chr17 13695246 13695555 -75808998 + MLT1D LTR MaLR 1 321 -184 2390 88 3 3 chr17 13695630 13695937 -75808616 + AluSp SINE Alu 1 307 -6 740 296 64 30 chr17 13696037 13696398 -75808155 + MLT1G1 LTR MaLR 11 400 -172 278 231 220 22 chr17 13696581 13696672 -75807881 + MLT1G1 LTR MaLR 472 580 -15 229 163 70 0 chr17 13696641 13696684 -75807869 + MLT1H1 LTR MaLR 510 555 0 * 216 202 313 0 chr17 13696694 13696793 -75807760 - MER5B DNA MER1_type -48 130 1 2240 105 0 20 chr17 13697365 13697671 -75806882 + AluSx SINE Alu 1 300 -12 352 259 58 36 chr17 13698474 13698613 -75805940 + MER103 DNA DNA 10 151 -15 1697 192 0 10 chr17 13698737 13699039 -75805514 + AluJb SINE Alu 1 299 -13 200 170 43 0 chr17 13699893 13699940 -75804613 + CT-rich Low_complexity Low_complexity 6 54 0 693 128 9 0 chr17 13700118 13700227 -75804326 - FLAM_A SINE Alu 0 142 33 489 305 14 0 chr17 13700819 13700960 -75803593 + MIR SINE MIR 99 241 -21 2475 93 0 0 chr17 13701625 13701935 -75802618 - AluY SINE Alu -1 310 1 312 335 66 11 chr17 13702256 13702438 -75802115 - MIR SINE MIR -48 214 23 1527 155 4 0 chr17 13703035 13703261 -75801292 + AluJb SINE Alu 85 311 -1 204 211 0 0 chr17 13703261 13703299 -75801254 + GA-rich Low_complexity Low_complexity 3 40 0 2429 91 0 0 chr17 13705232 13705530 -75799023 + AluSq SINE Alu 1 298 -15 2402 88 0 0 chr17 13705532 13705827 -75798726 - AluY SINE Alu -16 295 1 288 282 134 7 chr17 13706322 13706464 -75798089 - MIR3 SINE MIR -2 206 47 1919 135 24 9 chr17 13707486 13707719 -75796834 - MER44D DNA MER2_type -1882 609 381 2327 108 0 0 chr17 13707719 13708016 -75796537 - AluSx SINE Alu -15 297 1 1919 135 24 9 chr17 13708016 13708116 -75796437 - MER44D DNA MER2_type -2110 381 1 2695 39 7 0 chr17 13708383 13708692 -75795861 + AluY SINE Alu 1 311 0 251 311 48 90 chr17 13708692 13708850 -75795703 - L2 LINE L2 -85 3187 3035 256 250 12 0 chr17 13709047 13709127 -75795426 + (CA)n Simple_repeat Simple_repeat 1 81 0 2492 86 0 0 chr17 13709197 13709499 -75795054 + AluSx SINE Alu 1 302 -10 2197 127 0 0 chr17 13710624 13710923 -75793630 + AluSc SINE Alu 1 299 -10 2348 100 10 0 chr17 13711545 13711854 -75792699 - AluSx SINE Alu 0 312 1 187 224 17 52 chr17 13713958 13714016 -75790537 - L2 LINE L2 0 3272 3217 2465 88 0 0 chr17 13714267 13714564 -75789989 - AluSq SINE Alu -16 297 1 2034 130 7 3 chr17 13714595 13714887 -75789666 + AluSq SINE Alu 1 293 -20 24 0 0 0 chr17 13715176 13715200 -75789353 + AT_rich Low_complexity Low_complexity 1 24 0 231 347 151 20 chr17 13715487 13715686 -75788867 - MIR SINE MIR -18 244 20 2535 76 0 0 chr17 13715850 13716153 -75788400 + AluY SINE Alu 1 303 -8 2481 78 3 0 chr17 13716389 13716697 -75787856 + AluSp SINE Alu 1 309 -4 200 111 28 0 chr17 13718742 13718778 -75785775 + (CA)n Simple_repeat Simple_repeat 2 38 0 1249 87 50 3 chr17 13719348 13719569 -75784984 + AluSc SINE Alu 2 308 -1 334 244 143 25 chr17 13721129 13721248 -75783305 - MIR SINE MIR -111 151 19 2298 85 0 67 chr17 13721663 13721992 -75782561 + AluSq SINE Alu 1 307 -6 287 24 0 24 chr17 13724713 13724754 -75779799 + (CTTA)n Simple_repeat Simple_repeat 2 41 0 248 0 0 30 chr17 13724986 13725019 -75779534 + (ATTG)n Simple_repeat Simple_repeat 3 34 0 246 331 86 20 chr17 13730032 13730183 -75774370 - MER5B DNA MER1_type -17 161 1 199 230 40 70 chr17 13730500 13730600 -75773953 + L2 LINE L2 3106 3202 -111 389 314 66 0 chr17 13730874 13731011 -75773542 + MIR SINE MIR 52 197 -65 2219 191 43 5 chr17 13731447 13731887 -75772666 + MSTB2 LTR MaLR 1 457 0 268 224 203 63 chr17 13732177 13732320 -75772233 - MIR SINE MIR -78 184 22 219 176 49 211 chr17 13732473 13732532 -75772021 - MER5B DNA MER1_type -59 119 95 2425 65 3 0 chr17 13732532 13732823 -75771730 - AluY SINE Alu -19 292 1 219 176 49 211 chr17 13732823 13732905 -75771648 - MER5B DNA MER1_type -83 95 1 527 239 103 22 chr17 13733350 13733534 -75771019 - MER20 DNA MER1_type -17 202 4 195 323 16 0 chr17 13733603 13733665 -75770888 - MER5A DNA MER1_type -89 100 38 390 273 112 19 chr17 13733684 13733845 -75770708 - MER5B DNA MER1_type -2 176 1 2243 65 18 4 chr17 13734080 13734409 -75770144 + AluSq SINE Alu 1 333 0 368 305 70 5 chr17 13734438 13734638 -75769915 + L1ME4a LINE L1 5535 5747 -374 275 207 52 0 chr17 13734738 13734796 -75769757 + L1ME4a LINE L1 5979 6039 -82 662 230 23 17 chr17 13734929 13735103 -75769450 + MER58A DNA MER1_type 47 221 -3 468 269 133 45 chr17 13736567 13736876 -75767677 + LTR16B LTR ERVL 120 455 -9 251 268 0 37 chr17 13736890 13736972 -75767581 - L1ME4a LINE L1 -77 6044 5966 2407 86 7 0 chr17 13738955 13739259 -75765294 + AluSp SINE Alu 1 306 -7 2253 87 37 3 chr17 13739706 13740004 -75764549 + AluY SINE Alu 1 308 -3 2080 121 0 0 chr17 13740466 13740774 -75763779 + AluSx SINE Alu 5 312 0 2157 135 3 0 chr17 13740785 13741096 -75763457 + AluSx SINE Alu 1 312 0 2396 84 0 7 chr17 13741096 13741394 -75763159 + AluSc SINE Alu 1 296 -13 30 59 0 0 chr17 13741921 13741972 -75762581 + AT_rich Low_complexity Low_complexity 1 51 0 2251 110 7 7 chr17 13742575 13742875 -75761678 + AluSx SINE Alu 1 300 -12 2277 106 7 0 chr17 13743043 13743335 -75761218 - AluSg SINE Alu -16 294 1 2092 97 4 4 chr17 13746912 13747180 -75757373 + AluSc SINE Alu 35 302 -7 530 291 195 26 chr17 13747488 13748174 -75756379 - L2 LINE L2 -2 3311 2503 528 228 67 83 chr17 13748291 13748484 -75756069 - MIR SINE MIR 0 262 73 225 194 254 0 chr17 13748914 13748981 -75755572 + MER96 DNA MER1_type? 11 94 -81 1490 153 33 12 chr17 13749369 13749610 -75754943 + AluJo SINE Alu 1 246 -66 198 0 0 0 chr17 13749612 13749634 -75754919 + (A)n Simple_repeat Simple_repeat 1 22 0 21 36 0 0 chr17 13750076 13750104 -75754449 + AT_rich Low_complexity Low_complexity 1 28 0 901 130 7 0 chr17 13751379 13751542 -75753011 + AluSg/x SINE Alu 143 306 0 368 281 135 60 chr17 13751596 13751781 -75752772 + MIR SINE MIR 56 254 -8 1750 135 0 97 chr17 13752472 13752564 -75751989 + AluJo SINE Alu 3 102 -210 2314 107 0 0 chr17 13752564 13752863 -75751690 + AluSx SINE Alu 1 299 -13 1750 135 0 97 chr17 13752863 13753111 -75751442 + AluJo SINE Alu 102 310 -2 413 245 59 0 chr17 13753478 13753580 -75750973 + L2 LINE L2 3190 3297 -16 371 214 0 41 chr17 13754203 13754301 -75750252 - MLT1H LTR MaLR -398 151 58 2363 94 0 0 chr17 13754991 13755288 -75749265 + AluSx SINE Alu 1 297 -15 2107 174 34 15 chr17 13755288 13755403 -75749150 + Tigger3(Golem) DNA MER2_type 2614 2725 -303 2194 102 0 7 chr17 13755403 13755820 -75748733 - AluSp SINE Alu 0 417 3 2107 174 34 15 chr17 13755820 13756110 -75748443 + Tigger3(Golem) DNA MER2_type 2725 3028 0 189 337 24 0 chr17 13756205 13756288 -75748265 + L2 LINE L2 3187 3271 -1 1724 164 19 50 chr17 13756314 13756673 -75747880 - MLT1B LTR MaLR -16 374 27 1828 59 18 0 chr17 13756673 13756893 -75747660 + AluSg/x SINE Alu 83 306 -6 208 387 51 15 chr17 13756897 13757034 -75747519 - L2 LINE L2 -218 3054 2913 473 333 62 29 chr17 13757047 13757287 -75747266 - MIR SINE MIR -4 258 11 887 149 7 7 chr17 13757843 13758149 -75746404 + (TG)n Simple_repeat Simple_repeat 1 306 0 206 294 0 0 chr17 13758397 13758448 -75746105 + MIR SINE MIR 78 128 -134 471 256 12 16 chr17 13758496 13758901 -75745652 + CT-rich Low_complexity Low_complexity 1 403 0 2038 135 0 0 chr17 13758902 13759362 -75745191 - AluSx SINE Alu 0 460 1 331 205 25 16 chr17 13759363 13759485 -75745068 + CT-rich Low_complexity Low_complexity 1 123 0 1450 298 83 34 chr17 13759616 13760415 -75744138 - L2 LINE L2 -528 2786 1949 2005 141 0 0 chr17 13760536 13760846 -75743707 - AluSx SINE Alu 0 310 1 226 324 14 0 chr17 13760891 13760965 -75743588 - MER117 DNA MER1_type -121 76 2 280 135 27 0 chr17 13761191 13761265 -75743288 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 23 0 0 0 chr17 13761271 13761294 -75743259 + AT_rich Low_complexity Low_complexity 1 23 0 2060 103 0 77 chr17 13761307 13761618 -75742935 - AluSx SINE Alu -25 287 1 1802 179 32 6 chr17 13761642 13761989 -75742564 - MLT2D LTR ERVL -58 356 1 306 286 0 0 chr17 13762189 13762266 -75742287 - MIR SINE MIR 0 262 186 396 237 105 0 chr17 13763913 13764027 -75740526 + MER117 DNA MER1_type 18 143 -54 299 190 20 20 chr17 13764034 13764134 -75740419 + CT-rich Low_complexity Low_complexity 3 102 0 353 313 50 66 chr17 13764136 13764334 -75740219 - L2 LINE L2 -21 3251 3057 295 258 115 60 chr17 13764533 13764750 -75739803 - MER102a DNA MER1_type -2 328 100 297 0 0 0 chr17 13764954 13764987 -75739566 + (A)n Simple_repeat Simple_repeat 1 33 0 593 154 74 94 chr17 13765470 13765524 -75739029 - MER5A DNA MER1_type -1 188 134 2200 106 21 0 chr17 13765524 13765807 -75738746 + AluSg SINE Alu 1 289 -21 593 154 74 94 chr17 13765807 13765901 -75738652 - MER5A DNA MER1_type -55 134 43 2352 120 14 3 chr17 13767463 13767814 -75736739 - THE1A LTR MaLR 0 355 1 359 311 36 36 chr17 13768010 13768133 -75736420 + MIR3 SINE MIR 3 128 -80 2116 194 71 20 chr17 13768133 13768571 -75735982 + LOR1b LTR ERV1 2 461 0 359 311 36 36 chr17 13768571 13768614 -75735939 + MIR3 SINE MIR 127 169 -39 421 294 43 2 chr17 13768714 13768905 -75735648 - L1ME2 LINE L1 -5 6161 5966 973 201 110 3 chr17 13768943 13769359 -75735194 - MLT1D LTR MaLR 0 505 21 724 326 16 4 chr17 13769544 13769786 -75734767 - MIR SINE MIR -5 257 13 1289 214 78 96 chr17 13769859 13770291 -75734262 + MER34 LTR ERV1 1 422 -120 1967 160 3 31 chr17 13770291 13770609 -75733944 + AluSx SINE Alu 1 309 -3 1289 214 78 96 chr17 13770609 13770726 -75733827 + MER34 LTR ERV1 422 540 -2 2315 118 0 13 chr17 13770781 13771096 -75733457 - AluSx SINE Alu -1 311 1 2412 152 27 0 chr17 13771463 13771871 -75732682 + MSTB1 LTR MaLR 1 419 -13 1056 331 34 27 chr17 13771871 13772315 -75732238 - MLT1K LTR MaLR -135 453 7 674 303 60 23 chr17 13772595 13772961 -75731592 + LTR16A LTR ERVL 16 441 -9 341 161 65 0 chr17 13773050 13773112 -75731441 - L1MCc LINE L1 -5501 922 857 252 254 18 0 chr17 13773328 13773383 -75731170 + L2 LINE L2 2997 3052 -220 660 195 23 8 chr17 13773528 13773656 -75730897 - MLT2E LTR ERVL -47 581 452 2348 161 5 22 chr17 13773664 13774069 -75730484 + MER57A LTR ERV1 2 399 -4 347 215 8 85 chr17 13774139 13774269 -75730284 + MER112 DNA MER1_type 5 124 -136 1691 249 71 35 chr17 13774279 13774800 -75729753 + MER21B LTR ERV1 1 540 -323 2891 153 46 4 chr17 13774801 13775279 -75729274 - MER41E LTR ERV1 0 512 15 601 216 42 28 chr17 13775277 13775452 -75729101 + MER21B LTR ERV1 621 778 -85 * 2443 146 13 87 chr17 13775824 13776284 -75728269 - MSTB LTR MaLR 0 426 1 2329 97 10 3 chr17 13776620 13776930 -75727623 - AluSq SINE Alu -1 312 1 2228 116 0 0 chr17 13778310 13778604 -75725949 + AluSg SINE Alu 2 295 -15 463 200 9 9 chr17 13779283 13779393 -75725160 + MER5A DNA MER1_type 3 112 -77 1033 189 39 0 chr17 13781059 13781239 -75723314 + MER5A DNA MER1_type 2 188 -1 233 222 63 0 chr17 13781278 13781341 -75723212 + L2 LINE L2 3173 3239 -74 698 278 43 16 chr17 13781387 13781642 -75722911 - MIR SINE MIR 0 262 1 1935 153 10 13 chr17 13781796 13782097 -75722456 - AluJo SINE Alu -12 300 1 337 344 0 16 chr17 13782341 13782466 -75722087 + MIR SINE MIR 45 167 -95 2150 110 24 0 chr17 13782620 13782911 -75721642 - AluSq SINE Alu -15 298 1 211 227 0 0 chr17 13783597 13783641 -75720912 + A-rich Low_complexity Low_complexity 6 49 0 2337 72 28 0 chr17 13783793 13784084 -75720469 - AluY SINE Alu -12 299 1 1870 179 3 0 chr17 13784265 13784572 -75719981 + AluJo SINE Alu 2 309 -3 278 363 31 38 chr17 13784636 13784796 -75719757 - MIR3 SINE MIR -12 196 38 1803 213 17 8 chr17 13785186 13785548 -75719005 + MLT1A1 LTR MaLR 1 365 0 21 0 0 0 chr17 13785972 13785993 -75718560 + AT_rich Low_complexity Low_complexity 1 21 0 2355 101 0 19 chr17 13786464 13786780 -75717773 - AluSx SINE Alu -2 310 1 856 233 32 60 chr17 13786889 13786972 -75717581 - MIR SINE MIR -8 254 170 2114 124 7 0 chr17 13786972 13787270 -75717283 - AluSc SINE Alu -9 300 1 856 233 32 60 chr17 13787270 13787435 -75717118 - MIR SINE MIR -92 170 13 1058 262 27 46 chr17 13788766 13788836 -75715717 + L1ME1 LINE L1 5756 5826 -340 2394 95 0 0 chr17 13788836 13789142 -75715411 + AluSx SINE Alu 1 306 -6 1058 262 27 46 chr17 13789142 13789438 -75715115 + L1ME1 LINE L1 5826 6115 -51 180 0 0 0 chr17 13789758 13789778 -75714775 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2122 123 0 0 chr17 13789781 13790057 -75714496 - AluSx SINE Alu -36 276 1 2190 126 93 18 chr17 13790251 13790468 -75714085 - MSTA LTR MaLR 0 428 229 2111 109 0 3 chr17 13790468 13790751 -75713802 - AluSq SINE Alu -8 305 24 2190 126 93 18 chr17 13790751 13790931 -75713622 - MSTA LTR MaLR -199 229 1 2385 83 3 0 chr17 13791451 13791753 -75712800 + AluSq SINE Alu 1 303 -10 2201 103 3 0 chr17 13792492 13792783 -75711770 + AluSg SINE Alu 1 292 -18 23 0 0 0 chr17 13792783 13792806 -75711747 + AT_rich Low_complexity Low_complexity 1 23 0 501 266 90 62 chr17 13792830 13792950 -75711603 - L1ME4a LINE L1 -76 6045 5930 761 221 67 15 chr17 13792950 13793145 -75711408 - MER3 DNA MER1_type 0 209 5 501 266 90 62 chr17 13793145 13793274 -75711279 - L1ME4a LINE L1 -191 5930 5783 2274 110 0 0 chr17 13793274 13793573 -75710980 - AluSc SINE Alu -10 299 1 501 266 90 62 chr17 13793573 13793645 -75710908 - L1ME4a LINE L1 -338 5783 5714 801 110 0 0 chr17 13793662 13793771 -75710782 - AluSp/q SINE Alu -22 291 183 2229 116 3 0 chr17 13794114 13794408 -75710145 - AluSx SINE Alu -17 295 1 243 306 106 31 chr17 13794623 13794802 -75709751 - L1ME4a LINE L1 -1111 5035 4871 360 0 0 0 chr17 13794802 13794842 -75709711 + (TA)n Simple_repeat Simple_repeat 1 40 0 243 306 106 31 chr17 13794842 13795201 -75709352 - L1ME4a LINE L1 -1275 4871 4457 1623 164 33 33 chr17 13795292 13795597 -75708956 + AluJo SINE Alu 3 307 -5 1813 165 34 3 chr17 13795740 13796031 -75708522 - AluJb SINE Alu -12 300 1 505 284 73 14 chr17 13796244 13796462 -75708091 + MIR SINE MIR 2 232 -30 311 206 48 0 chr17 13796477 13796540 -75708013 - L1ME4a LINE L1 -1993 4153 4088 188 108 0 54 chr17 13796734 13796771 -75707782 - L2 LINE L2 0 3313 3279 299 327 108 50 chr17 13798874 13799134 -75705419 + L3 LINE CR1 433 707 -870 2129 121 3 3 chr17 13799466 13799771 -75704782 - AluSx SINE Alu -7 305 1 228 346 17 15 chr17 13800121 13800236 -75704317 - MIR SINE MIR -31 177 61 354 267 0 0 chr17 13800370 13800456 -75704097 - MIR SINE MIR -111 151 66 237 311 0 14 chr17 13800459 13800533 -75704020 - LTR28 LTR ERV1 0 1020 948 1346 210 49 37 chr17 13800580 13801098 -75703455 - LTR28 LTR ERV1 -39 755 416 757 134 37 159 chr17 13801163 13801342 -75703211 - LTR28 LTR ERV1 -286 166 1 2431 250 79 42 chr17 13801400 13802085 -75702468 - MER21B LTR ERV1 -51 812 93 2343 97 0 10 chr17 13802085 13802385 -75702168 - AluSx SINE Alu -15 297 1 2431 250 79 42 chr17 13802385 13802470 -75702083 - MER21B LTR ERV1 -770 93 13 905 199 29 24 chr17 13802594 13802800 -75701753 + MER6B DNA MER2_type 1 207 -3 225 0 0 0 chr17 13802895 13802920 -75701633 + (TTCCC)n Simple_repeat Simple_repeat 2 26 0 180 77 0 0 chr17 13803038 13803064 -75701489 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 715 258 11 50 chr17 13803084 13803266 -75701287 + MLT1D LTR MaLR 26 200 -426 527 164 10 0 chr17 13803276 13803380 -75701173 + GA-rich Low_complexity Low_complexity 1 105 0 1182 247 10 24 chr17 13803383 13803679 -75700874 + MLT1D LTR MaLR 179 470 -35 1677 185 74 35 chr17 13803708 13804102 -75700451 - LTR52 LTR ERVL -3 418 10 2477 97 0 0 chr17 13805088 13805398 -75699155 - AluSq SINE Alu -3 310 1 2469 160 36 2 chr17 13806813 13807225 -75697328 - MSTB LTR MaLR 0 426 1 1436 161 30 79 chr17 13807273 13807577 -75696976 - AluJo SINE Alu -23 289 1 649 209 103 143 chr17 13807777 13808037 -75696516 + L1ME3A LINE L1 4382 4615 -1531 1543 164 21 0 chr17 13808037 13808305 -75696248 + AluSx SINE Alu 40 312 0 649 209 103 143 chr17 13808305 13808555 -75695998 + L1ME3A LINE L1 4615 4873 -1273 657 252 124 68 chr17 13808557 13808823 -75695730 + L1ME3A LINE L1 5531 5811 -359 1359 217 45 0 chr17 13808823 13809113 -75695440 - MER58B DNA MER1_type -3 338 36 813 287 55 10 chr17 13809116 13809405 -75695148 + L1ME3A LINE L1 5812 6113 -57 755 229 57 57 chr17 13809494 13809738 -75694815 + MIR SINE MIR 19 262 0 2433 88 3 0 chr17 13810310 13810616 -75693937 - AluSg SINE Alu -3 307 1 1628 190 28 0 chr17 13810694 13810815 -75693738 + AluJb SINE Alu 2 118 -194 258 32 0 0 chr17 13810815 13810846 -75693707 + (CA)n Simple_repeat Simple_repeat 2 32 0 1628 190 28 0 chr17 13810846 13811008 -75693545 + AluJb SINE Alu 118 293 -19 186 171 24 0 chr17 13811064 13811105 -75693448 - L2 LINE L2 -1 3312 3271 679 286 16 4 chr17 13811286 13811488 -75693065 - L1ME LINE L1 -351 5770 5567 286 280 30 20 chr17 13811495 13811595 -75692958 - MIR3 SINE MIR 0 208 108 227 258 15 15 chr17 13812836 13812902 -75691651 + L2 LINE L2 3205 3270 -2 246 380 48 18 chr17 13813295 13813461 -75691092 + MER91A DNA MER1_type 1 171 -25 213 304 13 51 chr17 13813473 13813552 -75691001 + MER91A DNA MER1_type 118 193 -3 183 162 0 0 chr17 13813616 13813653 -75690900 + (TG)n Simple_repeat Simple_repeat 1 37 0 1683 161 23 23 chr17 13813746 13814056 -75690497 + AluJo SINE Alu 1 310 -2 240 111 0 0 chr17 13815222 13815258 -75689295 + (TG)n Simple_repeat Simple_repeat 1 36 0 2608 122 59 2 chr17 13815590 13815999 -75688554 - MSTB1 LTR MaLR 0 432 1 1496 169 103 0 chr17 13816650 13816923 -75687630 - AluJb SINE Alu -11 301 1 554 303 43 5 chr17 13817263 13817448 -75687105 + LTR16C LTR ERVL 97 288 -203 263 229 16 0 chr17 13817491 13817552 -75687001 + LTR16C LTR ERVL 429 490 -1 1288 200 48 54 chr17 13817648 13818074 -75686479 - MER39 LTR ERV1 -74 633 1 478 321 42 0 chr17 13819546 13819714 -75684839 - MIR SINE MIR -32 230 56 23 33 0 0 chr17 13819915 13819945 -75684608 + AT_rich Low_complexity Low_complexity 1 30 0 412 274 110 96 chr17 13820508 13820935 -75683618 - MLT1K LTR MaLR -16 572 140 1932 147 3 3 chr17 13821051 13821337 -75683216 - AluSq SINE Alu -27 286 1 1713 151 13 55 chr17 13821343 13821655 -75682898 - AluJb SINE Alu -13 299 1 1871 188 76 45 chr17 13821794 13822057 -75682496 - MLT1C LTR MaLR -3 464 180 2084 115 0 30 chr17 13822057 13822362 -75682191 - AluSg SINE Alu -14 296 1 1871 188 76 45 chr17 13822362 13822546 -75682007 - MLT1C LTR MaLR -287 180 3 2297 96 3 22 chr17 13823100 13823413 -75681140 + AluSp SINE Alu 1 307 -6 730 287 78 67 chr17 13823418 13823895 -75680658 - MER34 LTR ERV1 -48 494 13 570 258 240 37 chr17 13824018 13824159 -75680394 - L2 LINE L2 -245 3068 2957 2283 187 31 78 chr17 13824159 13824183 -75680370 + MER89 LTR ERV1 1 25 -534 2255 104 7 0 chr17 13824183 13824480 -75680073 + AluSp SINE Alu 3 301 -12 2283 187 31 78 chr17 13824480 13824767 -75679786 + MER89 LTR ERV1 25 324 -235 2164 114 0 4 chr17 13824767 13825048 -75679505 + AluSx SINE Alu 2 281 -31 360 0 0 0 chr17 13825054 13825094 -75679459 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 2283 187 31 78 chr17 13825094 13825361 -75679192 + MER89 LTR ERV1 329 559 0 570 258 240 37 chr17 13825361 13825554 -75678999 - L2 LINE L2 -356 2957 2805 1585 209 70 9 chr17 13825554 13825898 -75678655 + MLT1A1 LTR MaLR 1 365 0 570 258 240 37 chr17 13825898 13826645 -75677908 - L2 LINE L2 -508 2805 1755 3404 133 28 3 chr17 13826645 13827182 -75677371 + MER34B LTR ERV1 2 536 -29 232 241 152 38 chr17 13828375 13828454 -75676099 + MIR SINE MIR 60 148 -60 218 197 237 0 chr17 13828491 13828567 -75675986 - MIR SINE MIR -11 251 158 239 244 73 12 chr17 13829525 13829607 -75674946 + MIR3 SINE MIR 121 207 -1 415 278 99 40 chr17 13829612 13829835 -75674718 - MIR SINE MIR -10 252 17 3076 131 6 17 chr17 13829853 13829891 -75674662 - MER31A LTR ERV1 -8 477 440 2050 128 35 67 chr17 13829891 13830267 -75674286 - THE1B LTR MaLR 0 364 1 3076 131 6 17 chr17 13830267 13830710 -75673843 - MER31A LTR ERV1 -45 440 1 2103 94 59 3 chr17 13830724 13831011 -75673542 - AluSg1 SINE Alu -6 303 1 1650 139 4 54 chr17 13831356 13831420 -75673133 - MER57A LTR ERV1 -137 266 200 1884 143 21 0 chr17 13831420 13831729 -75672824 + AluJb SINE Alu 1 315 0 1650 139 4 54 chr17 13831729 13831943 -75672610 - MER57A LTR ERV1 -203 200 1 21 57 0 0 chr17 13832696 13832731 -75671822 + AT_rich Low_complexity Low_complexity 1 35 0 450 153 0 0 chr17 13833390 13833462 -75671091 - MER89 LTR ERV1 -12 547 476 443 195 13 0 chr17 13833469 13833546 -75671007 - MER66B LTR ERV1 -382 104 27 922 245 134 59 chr17 13833552 13834013 -75670540 - MER34 LTR ERV1 -20 522 22 2481 137 46 19 chr17 13834013 13834430 -75670123 + MSTA LTR MaLR 1 428 0 922 245 134 59 chr17 13834430 13834446 -75670107 - MER34 LTR ERV1 -520 22 9 831 184 162 43 chr17 13834457 13834735 -75669818 - MER34C LTR ERV1 -238 347 37 227 245 0 0 chr17 13834734 13834783 -75669770 + MER89 LTR ERV1 297 345 -214 * 1920 151 37 37 chr17 13834780 13835157 -75669396 + MER66B LTR ERV1 109 485 -1 374 209 55 86 chr17 13835262 13835425 -75669128 + MER34C LTR ERV1 428 585 0 * 1693 144 24 10 chr17 13835425 13835722 -75668831 - MER89 LTR ERV1 -258 301 1 330 328 58 11 chr17 13835791 13835965 -75668588 - MIR SINE MIR -45 217 36 689 179 150 0 chr17 13836166 13836339 -75668214 - L1MB4 LINE L1 0 6180 5982 1012 253 68 40 chr17 13836341 13836846 -75667707 - MER39 LTR ERV1 0 649 4 1316 186 25 41 chr17 13836851 13837168 -75667385 - L1MB4 LINE L1 -202 5982 5671 2166 116 3 0 chr17 13837252 13837546 -75667007 - AluSq SINE Alu -18 295 1 2146 134 0 10 chr17 13838313 13838620 -75665933 - AluSx SINE Alu -8 304 1 1816 161 27 3 chr17 13839500 13839799 -75664754 + AluJo SINE Alu 6 311 -1 2142 125 0 14 chr17 13840050 13840345 -75664208 + AluSx SINE Alu 1 291 -21 2046 111 7 14 chr17 13841048 13841337 -75663216 + AluSc SINE Alu 1 287 -22 1442 219 0 32 chr17 13841350 13841661 -75662892 - AluJo SINE Alu -11 301 1 3774 159 28 14 chr17 13841662 13842381 -75662172 - L1MA7 LINE L1 -5 6286 5558 1960 112 95 0 chr17 13842552 13842837 -75661716 - AluSx SINE Alu 0 312 1 1483 211 145 8 chr17 13842859 13843142 -75661411 + MER34 LTR ERV1 1 354 -188 3669 53 0 7 chr17 13843142 13843597 -75660956 - L1PA5 LINE L1 0 6154 5703 1483 211 145 8 chr17 13843597 13843706 -75660847 + MER34 LTR ERV1 354 447 -95 1251 143 14 5 chr17 13843708 13843924 -75660629 - Tigger1 DNA MER2_type -1 2417 2200 576 169 92 39 chr17 13843922 13844052 -75660501 - Tigger1 DNA MER2_type -2281 137 1 * 395 174 128 0 chr17 13844052 13844136 -75660417 + MER34 LTR ERV1 445 539 -3 2240 88 21 0 chr17 13844196 13844479 -75660074 - AluSc SINE Alu -20 289 1 1821 142 3 86 chr17 13844761 13845098 -75659455 - AluSx SINE Alu -3 309 1 874 247 85 60 chr17 13845223 13845657 -75658896 - MER39 LTR ERV1 -1 706 69 257 270 27 0 chr17 13845744 13845818 -75658735 + MIR SINE MIR 93 168 -94 333 297 65 19 chr17 13848326 13848481 -75656072 - L3 LINE CR1 -224 1353 1192 2593 58 0 3 chr17 13848482 13848791 -75655762 + AluY SINE Alu 1 308 -3 2316 104 0 0 chr17 13849194 13849503 -75655050 + AluSc SINE Alu 1 309 0 1788 131 73 7 chr17 13849890 13850164 -75654389 - AluSx SINE Alu -18 294 3 25 31 0 0 chr17 13850381 13850413 -75654140 + AT_rich Low_complexity Low_complexity 1 32 0 1683 172 0 34 chr17 13850551 13850848 -75653705 - AluJo SINE Alu -21 291 5 24 32 0 0 chr17 13851057 13851088 -75653465 + AT_rich Low_complexity Low_complexity 1 31 0 698 109 9 0 chr17 13851501 13851611 -75652942 + (TTTC)n Simple_repeat Simple_repeat 4 114 0 332 278 142 6 chr17 13851611 13851780 -75652773 - HAL1 LINE L1 -710 1797 1606 332 304 47 14 chr17 13852103 13852163 -75652390 - MIR SINE MIR -44 218 161 2336 97 7 0 chr17 13852163 13852463 -75652090 - AluSp SINE Alu -11 302 1 332 304 47 14 chr17 13852463 13852550 -75652003 - MIR SINE MIR -101 161 66 696 56 0 0 chr17 13852601 13852690 -75651863 + (TTCC)n Simple_repeat Simple_repeat 2 90 0 1569 208 10 7 chr17 13852710 13853018 -75651535 - AluJo SINE Alu -2 310 2 536 271 8 0 chr17 13853953 13854082 -75650471 + MER58B DNA MER1_type 181 310 -31 231 259 95 26 chr17 13854191 13854307 -75650246 + L1ME LINE L1 5722 5845 -321 2028 132 4 0 chr17 13854334 13854643 -75649910 + AluSx SINE Alu 1 310 0 22 0 0 0 chr17 13854692 13854714 -75649839 + AT_rich Low_complexity Low_complexity 1 22 0 247 200 20 0 chr17 13854805 13854855 -75649698 + GA-rich Low_complexity Low_complexity 2 52 0 258 32 0 0 chr17 13854926 13854957 -75649596 + (TG)n Simple_repeat Simple_repeat 1 31 0 180 0 0 0 chr17 13854956 13854976 -75649577 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 2509 53 3 3 chr17 13855817 13856119 -75648434 - AluY SINE Alu -9 302 1 21 0 0 0 chr17 13856120 13856141 -75648412 + AT_rich Low_complexity Low_complexity 1 21 0 2241 118 0 0 chr17 13857018 13857314 -75647239 - AluSx SINE Alu -16 296 1 28 29 0 0 chr17 13857325 13857360 -75647193 + AT_rich Low_complexity Low_complexity 1 35 0 33 56 0 0 chr17 13857552 13857606 -75646947 + AT_rich Low_complexity Low_complexity 1 54 0 25 51 0 0 chr17 13857947 13857986 -75646567 + AT_rich Low_complexity Low_complexity 1 39 0 2480 77 3 0 chr17 13857996 13858296 -75646257 + AluSp SINE Alu 1 301 -12 207 100 0 0 chr17 13858314 13858344 -75646209 + (A)n Simple_repeat Simple_repeat 1 30 0 2053 131 10 0 chr17 13858369 13858660 -75645893 - AluSx SINE Alu -18 294 1 3796 214 42 74 chr17 13858770 13860025 -75644528 - L1MC4a LINE L1 -101 7707 6554 1629 128 21 21 chr17 13860025 13860267 -75644286 + AluSx SINE Alu 1 242 -70 450 300 59 56 chr17 13860396 13860572 -75643981 + L3 LINE CR1 1176 1350 -227 2209 110 0 3 chr17 13860572 13860872 -75643681 + AluSg SINE Alu 5 303 -7 450 300 59 56 chr17 13860872 13861085 -75643468 + L3 LINE CR1 1350 1566 -11 249 294 20 20 chr17 13861194 13861296 -75643257 + MIR SINE MIR 15 116 -146 398 351 96 0 chr17 13862422 13862610 -75641943 - L3 LINE CR1 -2 1575 1370 6228 100 7 15 chr17 13862651 13863747 -75640806 + L1PA14 LINE L1 5070 6161 0 2212 115 0 0 chr17 13863754 13864042 -75640511 + AluSg1 SINE Alu 1 288 -21 220 154 39 0 chr17 13864068 13864120 -75640433 + (CA)n Simple_repeat Simple_repeat 2 55 0 809 214 287 62 chr17 13864180 13864581 -75639972 + MLT1E2 LTR MaLR 52 603 -51 574 175 9 35 chr17 13864805 13864919 -75639634 + MER81 DNA DNA 3 113 -1 463 311 171 4 chr17 13865101 13865352 -75639201 + MLT1L LTR MaLR 315 607 -8 204 354 58 35 chr17 13866326 13866666 -75637887 + L2 LINE L2 2694 3036 -236 184 320 0 0 chr17 13866706 13866756 -75637797 + L2 LINE L2 3210 3259 -13 251 360 47 7 chr17 13866776 13866926 -75637627 - L3 LINE CR1 -212 1365 1210 421 227 7 97 chr17 13866984 13867138 -75637415 - MIR SINE MIR -51 211 72 330 239 40 23 chr17 13867727 13867903 -75636650 + (TG)n Simple_repeat Simple_repeat 2 180 0 198 0 0 0 chr17 13867951 13867973 -75636580 + (TG)n Simple_repeat Simple_repeat 2 23 0 332 122 47 19 chr17 13868033 13868140 -75636413 + (TG)n Simple_repeat Simple_repeat 2 111 0 192 261 148 26 chr17 13869628 13869743 -75634810 + MER5A DNA MER1_type 37 165 -24 23 0 0 0 chr17 13869855 13869878 -75634675 + AT_rich Low_complexity Low_complexity 1 23 0 303 266 29 54 chr17 13869972 13870111 -75634442 - MIR SINE MIR -59 149 16 2647 98 16 19 chr17 13870691 13871067 -75633486 + THE1C LTR MaLR 1 375 0 9511 125 62 9 chr17 13871069 13872567 -75631986 + THE1C-int LTR MaLR 3 1580 0 2682 99 16 11 chr17 13872567 13872940 -75631613 + THE1C LTR MaLR 1 375 0 215 185 0 19 chr17 13874357 13874411 -75630142 + CT-rich Low_complexity Low_complexity 4 56 0 300 231 48 39 chr17 13875015 13875119 -75629434 - MER103 DNA DNA -60 106 2 241 341 105 11 chr17 13876416 13876768 -75627785 - L1ME4a LINE L1 -177 5944 5560 26 30 0 0 chr17 13876827 13876860 -75627693 + AT_rich Low_complexity Low_complexity 1 33 0 410 335 53 29 chr17 13877041 13877250 -75627303 - MIR SINE MIR -13 249 36 218 328 0 0 chr17 13877281 13877345 -75627208 + (CATA)n Simple_repeat Simple_repeat 4 67 0 1221 256 20 10 chr17 13877417 13877714 -75626839 - AluJo SINE Alu -12 300 1 1990 92 4 11 chr17 13877761 13878034 -75626519 + AluSx SINE Alu 37 307 -5 23 33 0 0 chr17 13878074 13878104 -75626449 + AT_rich Low_complexity Low_complexity 1 30 0 337 272 76 0 chr17 13878181 13878273 -75626280 - Tigger7 DNA MER2_type -6 2481 2383 893 168 63 0 chr17 13878273 13878463 -75626090 - Tigger7 DNA MER2_type -64 2523 2322 1496 119 211 54 chr17 13878469 13878839 -75625714 + MSTA LTR MaLR 1 428 0 1044 204 56 0 chr17 13878841 13879037 -75625516 - Tigger7 DNA MER2_type -524 209 3 316 274 14 68 chr17 13879202 13879348 -75625205 - L1 LINE L1 -2362 3784 3647 304 286 104 54 chr17 13879608 13879888 -75624665 - L1 LINE L1 -2847 3299 3006 780 150 0 0 chr17 13880219 13880352 -75624201 - L1MA5 LINE L1 -2 6298 6166 381 355 63 37 chr17 13880745 13881128 -75623425 - L2 LINE L2 -1625 1689 1297 1123 100 0 0 chr17 13881136 13881324 -75623229 - AluSp SINE Alu 0 321 134 357 378 27 11 chr17 13881394 13881582 -75622971 - L2 LINE L2 -2087 1227 1037 2694 243 89 21 chr17 13881838 13881890 -75622663 + L1M4 LINE L1 3404 3451 -2695 1854 168 3 7 chr17 13881890 13882193 -75622360 + AluJo SINE Alu 3 304 -8 2694 243 89 21 chr17 13882193 13883190 -75621363 + L1M4 LINE L1 3451 4524 -1622 5689 191 37 14 chr17 13883227 13883784 -75620769 - L1MC1 LINE L1 0 6613 6070 2173 95 0 3 chr17 13883784 13884119 -75620434 - AluSg SINE Alu 0 334 1 5689 191 37 14 chr17 13884119 13885423 -75619130 - L1MC1 LINE L1 -543 6070 4700 4119 173 82 47 chr17 13885497 13885657 -75618896 - L1MC1 LINE L1 -5429 997 844 202 0 91 0 chr17 13885657 13885690 -75618863 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4119 173 82 47 chr17 13885690 13886474 -75618079 - L1MC1 LINE L1 -5582 844 20 3272 245 81 92 chr17 13886683 13888530 -75616023 - Charlie2b DNA MER1_type -954 1828 2 1593 218 88 38 chr17 13888560 13889037 -75615516 - MLT1D LTR MaLR 0 505 5 1911 9 5 14 chr17 13889207 13889428 -75615125 - AluYa5 SINE Alu 0 311 93 342 284 60 49 chr17 13890547 13890730 -75613823 - MIR3 SINE MIR -7 201 17 1557 149 15 79 chr17 13890760 13891089 -75613464 + AluJo SINE Alu 2 309 -3 1174 199 146 12 chr17 13891176 13891498 -75613055 - MLT1A1 LTR MaLR 0 365 1 512 275 0 14 chr17 13891725 13891867 -75612686 + MER117 DNA MER1_type 7 146 -51 359 302 79 16 chr17 13892773 13892962 -75611591 + L2 LINE L2 3074 3274 -39 650 277 62 32 chr17 13893535 13893777 -75610776 - MIR SINE MIR -6 256 10 1268 227 123 54 chr17 13894489 13894951 -75609602 - MLT1D LTR MaLR -9 496 3 261 263 19 23 chr17 13895308 13895399 -75609154 + MLT1J2 LTR MaLR 58 136 -314 1853 108 194 19 chr17 13896075 13896435 -75608118 - MSTA LTR MaLR -1 427 5 324 270 31 55 chr17 13896693 13896794 -75607759 - L1MC4a LINE L1 -1917 5891 5794 2158 191 109 27 chr17 13896794 13897318 -75607235 + MLT1F1 LTR MaLR 1 567 0 324 270 31 55 chr17 13897318 13897379 -75607174 - L1MC4a LINE L1 -2014 5794 5733 521 292 67 53 chr17 13897401 13897511 -75607042 - L1MC4a LINE L1 -2055 4091 3984 3900 97 21 0 chr17 13897511 13898099 -75606454 + L1MA2 LINE L1 5715 6314 0 521 292 67 53 chr17 13898099 13898477 -75606076 - L1MC4a LINE L1 -2162 3984 3595 2481 198 121 111 chr17 13898554 13899133 -75605420 - L1MC3 LINE L1 -8 7777 7088 292 266 0 43 chr17 13899133 13899227 -75605326 - MLT1F1 LTR MaLR -443 124 35 2481 198 121 111 chr17 13899227 13899653 -75604900 - L1MC3 LINE L1 -697 7088 6668 3475 197 25 56 chr17 13899666 13900517 -75604036 - L1MB7 LINE L1 -10 6174 5351 216 0 0 0 chr17 13900517 13900541 -75604012 + (CATAT)n Simple_repeat Simple_repeat 2 25 0 3475 197 25 56 chr17 13900541 13900578 -75603975 - L1MB7 LINE L1 -833 5351 5314 538 185 0 0 chr17 13900629 13900721 -75603832 + FLAM SINE Alu 39 130 -13 338 311 114 8 chr17 13900738 13900870 -75603683 + L1M4b LINE L1 798 943 -5916 22 0 0 0 chr17 13900875 13900897 -75603656 + AT_rich Low_complexity Low_complexity 1 22 0 1839 148 18 7 chr17 13900939 13901256 -75603297 + AluSx SINE Alu 3 322 0 29 28 0 0 chr17 13901555 13901591 -75602962 + AT_rich Low_complexity Low_complexity 1 36 0 249 285 47 101 chr17 13901713 13901865 -75602688 - L1M4 LINE L1 -1967 4179 4047 2234 98 7 0 chr17 13901865 13901991 -75602562 + AluY SINE Alu 1 125 -186 279 0 0 0 chr17 13901991 13902022 -75602531 + (CA)n Simple_repeat Simple_repeat 2 32 0 2234 98 7 0 chr17 13902022 13902201 -75602352 + AluY SINE Alu 125 308 -3 249 285 47 101 chr17 13902201 13902325 -75602228 - L1M4 LINE L1 -2099 4047 3918 396 299 33 33 chr17 13902509 13902720 -75601833 + L1MC4a LINE L1 5713 5923 -1885 2467 149 63 0 chr17 13902736 13902996 -75601557 + L1MA6 LINE L1 5196 5438 -862 272 27 27 0 chr17 13902996 13903033 -75601520 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 2467 149 63 0 chr17 13903033 13903269 -75601284 + L1MA6 LINE L1 5438 5734 -566 2936 161 52 51 chr17 13903312 13904984 -75599569 + MER61D-int LTR ERV1 478 2426 -2791 * 11615 116 14 12 chr17 13904968 13907046 -75597507 + MER61D-int LTR ERV1 3055 5206 -11 2920 45 0 0 chr17 13907047 13907401 -75597152 - L1PA4 LINE L1 0 6155 5802 4708 32 0 0 chr17 13907401 13908140 -75596413 + L1PA4 LINE L1 5075 5813 -342 2177 159 42 16 chr17 13908192 13908570 -75595983 + MER61D LTR ERV1 114 501 0 3268 150 16 3 chr17 13908571 13909136 -75595417 + L1MA6 LINE L1 5729 6300 0 23 0 0 0 chr17 13909138 13909161 -75595392 + AT_rich Low_complexity Low_complexity 1 23 0 728 313 111 48 chr17 13909183 13909912 -75594641 + L2 LINE L2 2522 3311 -2 2345 71 3 0 chr17 13910021 13910327 -75594226 + AluSp SINE Alu 1 307 0 31 58 0 0 chr17 13910398 13910450 -75594103 + AT_rich Low_complexity Low_complexity 1 52 0 358 198 87 0 chr17 13910540 13910666 -75593887 - L1MC/D LINE L1 -2377 5431 5295 676 315 134 39 chr17 13910945 13911242 -75593311 - L1M4 LINE L1 -2664 3482 3215 1715 205 0 0 chr17 13911242 13911554 -75592999 - AluJo SINE Alu 0 312 1 676 315 134 39 chr17 13911554 13911906 -75592647 - L1M4 LINE L1 -2931 3215 2898 2408 57 7 3 chr17 13911906 13912206 -75592347 + AluY SINE Alu 1 301 -10 676 315 134 39 chr17 13912206 13912587 -75591966 - L1M4 LINE L1 -3248 2898 2353 2302 99 0 3 chr17 13913689 13913992 -75590561 + AluSg SINE Alu 1 302 -8 2569 234 53 33 chr17 13914004 13914494 -75590059 + L1ME2 LINE L1 5236 5750 -414 1812 147 136 16 chr17 13914494 13914935 -75589618 - LTR54B LTR ERV1 -4 494 1 2569 234 53 33 chr17 13914935 13915249 -75589304 + L1ME2 LINE L1 5750 6056 -108 21 95 0 0 chr17 13916803 13916866 -75587687 + AT_rich Low_complexity Low_complexity 1 63 0 2581 151 16 23 chr17 13917333 13917770 -75586783 - Tigger2a DNA MER2_type 0 434 1 477 300 82 29 chr17 13918111 13918451 -75586102 + L1M4 LINE L1 3071 3428 -2718 2459 85 0 0 chr17 13918719 13919024 -75585529 + AluSg SINE Alu 1 305 -5 26 74 0 0 chr17 13919184 13919238 -75585315 + AT_rich Low_complexity Low_complexity 1 54 0 347 188 12 0 chr17 13919674 13919754 -75584799 - L2 LINE L2 -1618 1696 1616 663 279 140 52 chr17 13919757 13920370 -75584183 - L2 LINE L2 -1117 2197 1531 234 376 66 33 chr17 13921614 13921885 -75582668 + L2 LINE L2 2219 2498 -816 2450 91 0 0 chr17 13921928 13922235 -75582318 + AluSq SINE Alu 1 307 -6 1299 324 94 26 chr17 13922885 13923974 -75580579 - L2 LINE L2 -4 3309 2149 1550 240 67 74 chr17 13924246 13924465 -75580088 + MER77 LTR ERV1 53 272 -333 3260 108 2 0 chr17 13924465 13924917 -75579636 - MLT2A2 LTR ERVL 0 453 1 1550 240 67 74 chr17 13924917 13925248 -75579305 + MER77 LTR ERV1 272 599 -6 2106 154 46 14 chr17 13925251 13925601 -75578952 + THE1B LTR MaLR 3 363 -1 1633 144 9 72 chr17 13926272 13926618 -75577935 + MER33 DNA MER1_type 1 324 0 4416 147 20 0 chr17 13929095 13929802 -75574751 - L1PA16 LINE L1 -6 6160 5440 1253 191 70 0 chr17 13929802 13930074 -75574479 + L1 LINE L1 4644 4934 -1212 * 1676 182 33 14 chr17 13930061 13930424 -75574129 + L1 LINE L1 3963 4332 -1814 367 253 80 60 chr17 13931093 13931243 -75573310 + MIR3 SINE MIR 41 193 -15 2269 181 50 83 chr17 13931360 13932210 -75572343 - MER21A LTR ERV1 0 931 1 242 217 14 0 chr17 13932346 13932415 -75572138 + CT-rich Low_complexity Low_complexity 27 96 0 571 199 18 18 chr17 13932438 13932609 -75571944 + CT-rich Low_complexity Low_complexity 1 171 0 215 121 0 0 chr17 13932609 13932642 -75571911 + (TTCC)n Simple_repeat Simple_repeat 2 34 0 670 179 7 7 chr17 13932642 13932787 -75571766 + CT-rich Low_complexity Low_complexity 2 146 0 276 30 0 0 chr17 13933002 13933035 -75571518 + (TG)n Simple_repeat Simple_repeat 1 33 0 357 109 0 0 chr17 13933156 13933211 -75571342 - MLT1F LTR MaLR 0 542 488 * 414 280 0 20 chr17 13933210 13933310 -75571243 - MLT1E LTR MaLR -485 108 11 698 239 81 113 chr17 13933323 13933658 -75570895 - MSTD-int LTR MaLR -7 1364 1041 775 287 42 7 chr17 13933925 13934214 -75570339 - MSTD-int LTR MaLR -765 606 308 1481 150 0 0 chr17 13934218 13934445 -75570108 - AluSg/x SINE Alu 0 310 84 287 322 171 20 chr17 13935533 13935825 -75568728 - L2 LINE L2 -5 3308 2973 203 303 49 49 chr17 13935872 13936014 -75568539 - L2 LINE L2 -419 2895 2754 1302 177 49 115 chr17 13936060 13936302 -75568251 - MER69 DNA AcHobo 0 2526 2270 2109 111 7 0 chr17 13936302 13936591 -75567962 + AluSq SINE Alu 2 292 -21 1302 177 49 115 chr17 13936591 13936759 -75567794 - MER69 DNA AcHobo -256 2270 2162 1702 173 4 4 chr17 13936759 13937036 -75567517 - AluJo SINE Alu -23 289 13 1302 177 49 115 chr17 13937036 13937200 -75567353 - MER69 DNA AcHobo -364 2162 1989 359 341 29 0 chr17 13937190 13937328 -75567225 - MER69 DNA AcHobo -2379 147 6 * 606 299 68 101 chr17 13938099 13938943 -75565610 - L1MEd LINE L1 -5228 891 76 4826 129 29 26 chr17 13939152 13939262 -75565291 - L1PA15 LINE L1 0 6165 6057 2982 93 12 12 chr17 13939262 13939693 -75564860 - MER57B LTR ERV1 -3 431 1 4826 129 29 26 chr17 13939693 13940397 -75564156 - L1PA15 LINE L1 -108 6057 5348 264 299 126 9 chr17 13940439 13940670 -75563883 - HAL1 LINE L1 -678 1829 1572 3370 201 125 153 chr17 13940682 13942339 -75562214 + L1MC3 LINE L1 4 1770 -4794 25 31 0 0 chr17 13942346 13942378 -75562175 + AT_rich Low_complexity Low_complexity 1 32 0 9248 159 6 9 chr17 13942382 13944249 -75560304 - L1PA13 LINE L1 -630 5531 3667 4265 87 52 5 chr17 13944249 13944867 -75559686 + L1PA13 LINE L1 5512 6160 -3 1903 274 60 18 chr17 13944875 13946166 -75558387 + L1MC3 LINE L1 1989 3284 -3280 809 218 27 32 chr17 13946170 13946358 -75558195 - MSTD LTR MaLR 0 396 210 348 24 0 0 chr17 13946407 13946448 -75558105 + (TAA)n Simple_repeat Simple_repeat 3 43 0 1645 266 13 11 chr17 13946448 13946990 -75557563 + L1MC3 LINE L1 3598 4140 -2424 2227 211 55 0 chr17 13947026 13947485 -75557068 + MLT1D LTR MaLR 22 505 0 9332 210 96 28 chr17 13947485 13948760 -75555793 + L1MC3 LINE L1 4137 5324 -2879 303 28 0 0 chr17 13948760 13948796 -75555757 + (TA)n Simple_repeat Simple_repeat 2 37 0 9332 210 96 28 chr17 13948796 13951330 -75553223 + L1MC3 LINE L1 5324 8203 0 518 281 71 129 chr17 13951331 13951653 -75552900 - HAL1 LINE L1 -939 1568 1229 963 123 6 17 chr17 13951653 13951832 -75552721 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 1650 188 33 7 chr17 13951840 13952144 -75552409 - AluSx SINE Alu 0 312 1 518 281 71 129 chr17 13952144 13952161 -75552392 - HAL1 LINE L1 -1285 1222 1206 387 0 0 0 chr17 13952161 13952204 -75552349 + (TG)n Simple_repeat Simple_repeat 2 44 0 1490 63 0 0 chr17 13952212 13952401 -75552152 - L1PA5 LINE L1 0 6154 5966 518 281 71 129 chr17 13952401 13952631 -75551922 - HAL1 LINE L1 -1308 1199 1045 2698 132 27 2 chr17 13952631 13953072 -75551481 - L1PA13 LINE L1 0 6163 5712 518 281 71 129 chr17 13953072 13953367 -75551186 - HAL1 LINE L1 -1462 1045 735 2381 90 6 0 chr17 13953710 13954021 -75550532 + AluSp SINE Alu 1 313 0 1174 142 78 5 chr17 13954038 13954257 -75550296 + L1PA13 LINE L1 5929 6163 0 492 298 45 30 chr17 13954856 13955054 -75549499 + MIR SINE MIR 32 232 -30 207 111 28 0 chr17 13956397 13956433 -75548120 + (TA)n Simple_repeat Simple_repeat 2 38 0 1453 187 32 32 chr17 13956519 13956835 -75547718 + MER2 DNA MER2_type 28 343 -2 387 0 0 0 chr17 13956835 13956878 -75547675 + (TG)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr17 13957424 13957445 -75547108 + AT_rich Low_complexity Low_complexity 1 21 0 270 250 38 8 chr17 13957563 13957695 -75546858 + (TA)n Simple_repeat Simple_repeat 2 137 0 409 288 109 8 chr17 13957736 13957993 -75546560 + L1ME4a LINE L1 5838 6120 -1 413 286 93 37 chr17 13958423 13958584 -75545969 - MIR SINE MIR -70 192 23 379 385 11 35 chr17 13958869 13959217 -75545336 - L1M4 LINE L1 -1850 4296 3957 1618 228 49 41 chr17 13959245 13959776 -75544777 + L1MC5 LINE L1 6996 7530 -431 613 211 51 24 chr17 13960058 13960248 -75544305 + MER63 DNA MER1_type 27 1688 0 203 364 21 57 chr17 13960939 13961079 -75543474 - MER5A DNA MER1_type -48 141 7 1629 193 145 0 chr17 13961094 13961426 -75543127 - MER57A LTR ERV1 -9 394 15 283 325 0 12 chr17 13962323 13962403 -75542150 + MIR SINE MIR 14 92 -170 1378 43 0 0 chr17 13962427 13962590 -75541963 - AluY SINE Alu -12 299 137 357 75 0 0 chr17 13963003 13963056 -75541497 + (TG)n Simple_repeat Simple_repeat 2 54 0 212 216 175 31 chr17 13963548 13963645 -75540908 - MIR SINE MIR -3 259 149 367 295 105 16 chr17 13964608 13964798 -75539755 + MIR SINE MIR 1 207 -55 315 314 0 0 chr17 13965031 13965117 -75539436 - L1MC4 LINE L1 -1343 6699 6614 625 331 65 41 chr17 13965147 13965706 -75538847 - L2 LINE L2 -20 3252 2683 308 284 139 16 chr17 13965753 13965947 -75538606 - L1MEc LINE L1 -4987 1397 1180 817 200 47 0 chr17 13965970 13966140 -75538413 + MER58A DNA MER1_type 47 224 0 414 295 118 20 chr17 13966142 13966396 -75538157 - L1MEc LINE L1 -5301 1262 984 2041 93 15 0 chr17 13966512 13966781 -75537772 - AluSx SINE Alu -1 311 39 2028 141 3 3 chr17 13967685 13967997 -75536556 + AluSx SINE Alu 1 312 0 324 0 0 0 chr17 13968009 13968045 -75536508 + (TG)n Simple_repeat Simple_repeat 2 37 0 421 295 174 0 chr17 13968513 13968703 -75535850 - MIR SINE MIR -6 256 34 225 0 0 0 chr17 13968882 13968907 -75535646 + (A)n Simple_repeat Simple_repeat 1 25 0 32 101 0 0 chr17 13969480 13969589 -75534964 + AT_rich Low_complexity Low_complexity 1 109 0 2270 90 0 0 chr17 13970091 13970379 -75534174 - AluSc SINE Alu -13 296 9 2497 265 69 26 chr17 13970421 13971202 -75533351 - L1MD2 LINE L1 -17 6342 5528 784 297 117 26 chr17 13971426 13971854 -75532699 - LTR33A LTR ERVL 0 523 57 266 225 18 108 chr17 13971945 13972056 -75532497 - L1ME LINE L1 -439 5682 5582 2132 116 30 0 chr17 13972176 13972477 -75532076 + AluSx SINE Alu 1 310 -2 2130 213 59 68 chr17 13972591 13973301 -75531252 - L1ME1 LINE L1 -5 6161 5458 544 345 83 5 chr17 13974462 13974864 -75529689 - L2 LINE L2 -227 3045 2612 571 334 76 23 chr17 13974878 13975312 -75529241 - L2 LINE L2 -926 2388 1932 511 159 24 87 chr17 13975763 13975820 -75528733 - FRAM SINE Alu -136 206 147 716 91 9 0 chr17 13975820 13975930 -75528623 + (TTCC)n Simple_repeat Simple_repeat 3 113 0 511 159 24 87 chr17 13975930 13976028 -75528525 - FRAM SINE Alu -195 147 59 32 0 0 0 chr17 13976117 13976149 -75528404 + AT_rich Low_complexity Low_complexity 1 32 0 203 324 0 0 chr17 13977714 13977782 -75526771 + L2 LINE L2 2228 2295 -1019 207 146 0 0 chr17 13978430 13978471 -75526082 + (CA)n Simple_repeat Simple_repeat 1 41 0 5430 238 85 53 chr17 13979050 13979219 -75525334 + L1M4 LINE L1 1653 1815 -4432 1597 103 60 4 chr17 13979219 13979451 -75525102 + AluSx SINE Alu 50 294 -18 5430 238 85 53 chr17 13979451 13983086 -75521467 + L1M4 LINE L1 1815 5558 -689 2527 52 7 3 chr17 13983086 13983395 -75521158 + AluY SINE Alu 1 310 -1 5430 238 85 53 chr17 13983395 13983515 -75521038 + L1M4 LINE L1 5558 5673 -574 308 228 63 39 chr17 13983519 13983646 -75520907 + L1ME1 LINE L1 4176 4305 -1841 475 266 63 14 chr17 13983668 13983875 -75520678 + L1ME1 LINE L1 5637 5853 -313 284 379 29 29 chr17 13983925 13984099 -75520454 + MIR3 SINE MIR 17 190 -18 22 56 0 0 chr17 13984100 13984136 -75520417 + AT_rich Low_complexity Low_complexity 1 36 0 280 287 106 70 chr17 13984233 13984602 -75519951 + MLT1K LTR MaLR 187 568 -20 301 193 70 0 chr17 13984904 13984961 -75519592 + L2 LINE L2 3212 3272 0 1940 128 54 0 chr17 13987949 13988053 -75516500 + AluSq SINE Alu 1 98 -342 185 0 0 39 chr17 13988053 13988079 -75516474 + (CTACT)n Simple_repeat Simple_repeat 1 25 0 1940 128 54 0 chr17 13988079 13988398 -75516155 + AluSq SINE Alu 98 440 0 210 71 0 0 chr17 13989199 13989227 -75515326 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 366 148 50 79 chr17 13989324 13989425 -75515128 + MER53 DNA DNA 1 98 -91 2311 210 43 2 chr17 13989444 13989929 -75514624 - LTR53 LTR ERVL -14 505 1 293 239 0 0 chr17 13989929 13989989 -75514564 + MER53 DNA DNA 125 184 -5 1032 156 0 0 chr17 13990578 13990758 -75513795 + CT-rich Low_complexity Low_complexity 1 180 0 294 143 0 0 chr17 13990758 13990807 -75513746 + (TCC)n Simple_repeat Simple_repeat 3 51 0 321 115 0 33 chr17 13990812 13990873 -75513680 - Alu SINE Alu -6 296 238 695 123 48 7 chr17 13990874 13991020 -75513533 + CT-rich Low_complexity Low_complexity 1 152 0 1171 189 13 34 chr17 13991020 13991253 -75513300 - AluJo SINE Alu -3 309 82 212 227 0 0 chr17 13991672 13991716 -75512837 - L2 LINE L2 -2 3311 3268 2201 119 3 0 chr17 13991950 13992243 -75512310 - AluSq SINE Alu -19 294 1 202 331 72 14 chr17 13992300 13992439 -75512114 + L2 LINE L2 2851 2997 -275 898 185 113 0 chr17 13992442 13992664 -75511889 + MER33 DNA MER1_type 2 248 -76 1024 133 129 63 chr17 13992802 13992949 -75511604 - L1MA8 LINE L1 -3 6288 6152 1525 226 0 7 chr17 13992949 13993246 -75511307 - AluJo SINE Alu -15 297 3 1024 133 129 63 chr17 13993246 13993384 -75511169 - L1MA8 LINE L1 -139 6152 5984 2394 70 0 13 chr17 13993411 13993711 -75510842 + AluY SINE Alu 1 296 -15 323 211 0 0 chr17 13993712 13993783 -75510770 + MER33 DNA MER1_type 293 363 0 284 314 53 92 chr17 13993805 13994012 -75510541 + L2 LINE L2 3030 3228 -44 * 938 333 118 35 chr17 13994006 13994691 -75509862 + L3 LINE CR1 621 1380 -197 2188 107 17 3 chr17 13994691 13994989 -75509564 - AluSq SINE Alu -11 302 1 938 333 118 35 chr17 13994989 13995086 -75509467 + L3 LINE CR1 1380 1468 -109 833 295 24 10 chr17 13995400 13995688 -75508865 - MER45C DNA AcHobo -626 327 36 2389 69 0 26 chr17 13995747 13996053 -75508500 - AluY SINE Alu -13 298 1 21 0 0 0 chr17 13996710 13996731 -75507822 + AT_rich Low_complexity Low_complexity 1 21 0 30 45 0 0 chr17 13997818 13997862 -75506691 + AT_rich Low_complexity Low_complexity 1 44 0 2200 104 14 0 chr17 13998613 13998900 -75505653 - AluSx SINE Alu -21 291 1 264 231 83 37 chr17 14000001 14000109 -75504444 + L1ME LINE L1 5518 5630 -491 384 22 0 0 chr17 14000633 14000678 -75503875 + (CA)n Simple_repeat Simple_repeat 1 45 0 747 226 42 6 chr17 14001544 14001712 -75502841 + MER5B DNA MER1_type 5 178 0 2267 82 0 0 chr17 14003449 14003769 -75500784 + AluSg SINE Alu 1 320 0 2592 49 0 13 chr17 14004467 14004775 -75499778 - AluY SINE Alu -7 304 1 465 295 32 32 chr17 14004851 14005068 -75499485 - MLT2F LTR ERVL -9 654 438 399 251 128 16 chr17 14005217 14005404 -75499149 - MLT2F LTR ERVL -455 208 1 510 204 0 0 chr17 14005720 14005833 -75498720 + GA-rich Low_complexity Low_complexity 4 116 0 212 258 150 42 chr17 14006381 14006501 -75498052 - MIR SINE MIR -10 252 120 1981 157 11 19 chr17 14007208 14007571 -75496982 + MLT1A1 LTR MaLR 1 360 -5 1976 124 17 3 chr17 14009865 14010156 -75494397 + AluSc SINE Alu 1 295 -14 2284 114 0 0 chr17 14010620 14010919 -75493634 + AluSx SINE Alu 4 302 -10 1101 191 69 3 chr17 14011327 14011749 -75492804 + MLT1D LTR MaLR 2 497 -8 183 333 0 0 chr17 14011996 14012044 -75492509 + L2 LINE L2 3242 3289 -24 729 211 0 0 chr17 14012053 14012186 -75492367 + FLAM_C SINE Alu 1 133 0 33 0 0 0 chr17 14012186 14012219 -75492334 + AT_rich Low_complexity Low_complexity 1 33 0 766 233 26 60 chr17 14014021 14014287 -75490266 - MER102a DNA MER1_type 0 330 74 241 337 0 42 chr17 14015048 14015143 -75489410 + MIR SINE MIR 37 127 -81 393 240 68 52 chr17 14015297 14015351 -75489202 - MLT1K LTR MaLR -10 578 526 194 62 31 0 chr17 14015351 14015383 -75489170 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 393 240 68 52 chr17 14015383 14015520 -75489033 - MLT1K LTR MaLR -62 526 384 1052 217 16 8 chr17 14016066 14016310 -75488243 - L1MB7 LINE L1 -16 6168 5923 2442 211 51 8 chr17 14016315 14016841 -75487712 + MER74A LTR ERVL 1 549 -9 1948 156 18 42 chr17 14016845 14016927 -75487626 - L1MB7 LINE L1 -251 5933 5851 3073 139 29 62 chr17 14016927 14017383 -75487170 - MER4B LTR ERV1 0 610 179 2007 130 4 0 chr17 14017383 14017660 -75486893 - AluSx SINE Alu -34 278 1 3073 139 29 62 chr17 14017660 14017834 -75486719 - MER4B LTR ERV1 -431 179 1 1948 156 18 42 chr17 14017834 14018255 -75486298 - L1MB7 LINE L1 -333 5851 5362 348 221 0 44 chr17 14018262 14018375 -75486178 - L1MB7 LINE L1 -1295 4851 4744 1305 247 28 42 chr17 14018463 14018896 -75485657 + MER39 LTR ERV1 259 685 -22 694 178 30 93 chr17 14019426 14019662 -75484891 - L1MB8 LINE L1 -12 6166 5946 1328 200 7 102 chr17 14019749 14020159 -75484394 + MLT1A2 LTR MaLR 4 374 0 284 164 15 60 chr17 14020269 14020336 -75484217 - LTR8A LTR ERV1 0 727 664 2496 191 63 44 chr17 14020386 14021051 -75483502 - LTR8A LTR ERV1 -49 678 1 590 248 12 81 chr17 14021081 14021339 -75483214 - L1M4b LINE L1 -5643 1216 977 933 235 45 87 chr17 14021515 14021980 -75482573 - LTR56 LTR ERV1 0 437 1 1236 202 72 35 chr17 14022134 14022511 -75482042 - LTR56-int LTR ERV1 -211 4912 4522 851 284 69 32 chr17 14022515 14022583 -75481970 - Charlie7 DNA MER1_type -2126 486 422 2238 114 0 3 chr17 14022583 14022889 -75481664 - AluSx SINE Alu -7 305 1 851 284 69 32 chr17 14022889 14023285 -75481268 - Charlie7 DNA MER1_type -2190 422 5 1095 176 22 57 chr17 14023307 14023534 -75481019 - MER20 DNA MER1_type 0 219 1 2000 77 91 11 chr17 14023855 14024140 -75480413 - AluSp SINE Alu -5 308 1 393 271 86 58 chr17 14024638 14024999 -75479554 + L1ME4a LINE L1 5513 5883 -238 2080 99 0 26 chr17 14025599 14025901 -75478652 - AluSg1 SINE Alu -15 294 1 281 365 21 0 chr17 14026064 14026160 -75478393 + L2 LINE L2 3173 3270 -2 291 300 0 27 chr17 14026395 14026505 -75478048 + CT-rich Low_complexity Low_complexity 1 107 0 682 162 28 22 chr17 14026517 14026696 -75477857 + CT-rich Low_complexity Low_complexity 1 180 0 645 300 162 40 chr17 14026975 14027345 -75477208 + L3 LINE CR1 656 1097 -480 2163 102 3 0 chr17 14027345 14027655 -75476898 - AluSp SINE Alu 0 311 1 645 300 162 40 chr17 14027655 14027753 -75476800 + L3 LINE CR1 1097 1182 -395 412 226 110 34 chr17 14027833 14027979 -75476574 - MLT1J1 LTR MaLR -38 408 252 2303 82 0 0 chr17 14028133 14028441 -75476112 - AluY SINE Alu 0 308 1 2205 125 0 3 chr17 14028826 14029139 -75475414 - AluSx SINE Alu 0 312 1 22 0 0 0 chr17 14029206 14029228 -75475325 + AT_rich Low_complexity Low_complexity 1 22 0 959 156 0 72 chr17 14029282 14029462 -75475091 - AluJb SINE Alu -12 300 134 417 304 23 39 chr17 14029581 14029771 -75474782 - MIR SINE MIR -34 228 43 218 196 0 20 chr17 14030012 14030063 -75474490 + CT-rich Low_complexity Low_complexity 2 51 0 2274 109 0 0 chr17 14031464 14031768 -75472785 - AluSg1 SINE Alu -3 306 3 264 380 80 16 chr17 14031985 14032172 -75472381 + MIR SINE MIR 20 218 -44 238 305 201 0 chr17 14033661 14033815 -75470738 + MIR SINE MIR 22 206 -56 2461 94 0 0 chr17 14033830 14034137 -75470416 + AluSc SINE Alu 1 307 -2 2245 114 27 0 chr17 14034657 14034956 -75469597 + AluSg SINE Alu 1 307 -3 2119 112 11 0 chr17 14036463 14036750 -75467803 - AluSx SINE Alu -22 290 1 27 49 0 0 chr17 14037118 14037159 -75467394 + AT_rich Low_complexity Low_complexity 1 41 0 199 298 117 0 chr17 14037189 14037283 -75467270 + MIR SINE MIR 77 181 -81 2257 60 7 11 chr17 14039840 14040169 -75464384 - AluY SINE Alu 0 328 1 3518 137 46 37 chr17 14040960 14041147 -75463406 - L1PA16 LINE L1 -2 6164 5980 2400 89 0 0 chr17 14041147 14041440 -75463113 - AluSc SINE Alu -16 293 1 3518 137 46 37 chr17 14041440 14041929 -75462624 - L1PA16 LINE L1 -186 5980 5482 352 316 22 29 chr17 14042045 14042184 -75462369 + HAL1 LINE L1 1227 1364 -1143 364 347 143 48 chr17 14042213 14043245 -75461308 - L2 LINE L2 -21 3251 2136 416 295 105 50 chr17 14043697 14043955 -75460598 + HAL1b LINE L1 303 574 -774 3757 261 135 42 chr17 14045718 14047392 -75457161 - HAL1 LINE L1 -6 2501 983 2158 110 14 0 chr17 14047392 14047683 -75456870 + AluSc SINE Alu 1 295 -14 3757 261 135 42 chr17 14047683 14047769 -75456784 - HAL1 LINE L1 -1524 983 906 2060 143 21 19 chr17 14047769 14048141 -75456412 - THE1C LTR MaLR -2 373 1 3757 261 135 42 chr17 14048141 14048326 -75456227 - HAL1 LINE L1 -1601 906 740 1861 152 28 0 chr17 14048326 14048609 -75455944 - AluJb SINE Alu -21 291 1 3757 261 135 42 chr17 14048609 14048949 -75455604 - HAL1 LINE L1 -1767 740 2 346 292 88 102 chr17 14049036 14049409 -75455144 - MLT1I LTR MaLR 0 409 42 1364 173 153 3 chr17 14049457 14049757 -75454796 + MER7A DNA MER2_type 1 343 -3 2835 7 0 0 chr17 14050045 14050354 -75454199 - AluYa5 SINE Alu -2 309 1 1770 116 59 98 chr17 14050851 14051240 -75453313 - THE1C LTR MaLR 0 375 2 1986 136 7 0 chr17 14052013 14052299 -75452254 - AluSq SINE Alu -16 297 10 338 293 32 64 chr17 14052893 14053081 -75451472 - MIR SINE MIR -61 201 20 23 54 0 0 chr17 14053244 14053281 -75451272 + AT_rich Low_complexity Low_complexity 1 37 0 2159 102 3 0 chr17 14054126 14054409 -75450144 - AluSq SINE Alu -17 296 13 595 333 38 0 chr17 14054472 14054682 -75449871 + MER90 LTR ERV1 10 227 -387 837 236 8 62 chr17 14054713 14054972 -75449581 + MER90 LTR ERV1 370 614 0 274 263 5 134 chr17 14055426 14055635 -75448918 - MER102b DNA MER1_type -3 338 157 503 130 10 0 chr17 14055635 14055735 -75448818 + (TTCC)n Simple_repeat Simple_repeat 2 102 0 210 203 27 14 chr17 14055725 14055773 -75448780 + CT-rich Low_complexity Low_complexity 2 53 -23 * 2239 136 0 0 chr17 14055773 14056083 -75448470 - AluSg SINE Alu 0 310 1 210 203 27 14 chr17 14056083 14056108 -75448445 + CT-rich Low_complexity Low_complexity 53 76 0 558 187 0 0 chr17 14056136 14056243 -75448310 + MLT2B2 LTR ERVL 409 515 0 3360 224 77 41 chr17 14056252 14057213 -75447340 - L1M4 LINE L1 -5543 999 4 1875 122 0 0 chr17 14057547 14057802 -75446751 + AluSg SINE Alu 45 299 -11 265 270 84 51 chr17 14057817 14058032 -75446521 + L1ME4a LINE L1 5712 5933 -188 882 242 148 48 chr17 14060582 14060601 -75443952 - L2 LINE L2 -6 3307 3291 2170 110 0 17 chr17 14060601 14060900 -75443653 + AluSg SINE Alu 1 294 -16 882 242 148 48 chr17 14060900 14061538 -75443015 - L2 LINE L2 -22 3291 2576 197 175 0 25 chr17 14061661 14061701 -75442852 + L2 LINE L2 3263 3301 -12 307 270 98 76 chr17 14062365 14062562 -75441991 - MIR SINE MIR -21 187 14 323 291 129 9 chr17 14062979 14063189 -75441364 - L1ME LINE L1 -648 5522 5288 341 312 164 15 chr17 14063203 14063533 -75441020 - L1ME LINE L1 -908 5238 4860 189 0 0 0 chr17 14063998 14064019 -75440534 + (A)n Simple_repeat Simple_repeat 1 21 0 491 101 13 13 chr17 14064390 14064469 -75440084 + MADE1 DNA Mariner 2 80 0 1142 179 59 106 chr17 14064502 14064927 -75439626 + MLT1D LTR MaLR 1 405 -100 4733 166 8 4 chr17 14064930 14065944 -75438609 - L1PA16 LINE L1 -14 6152 5138 313 303 167 54 chr17 14066036 14066353 -75438200 + L2 LINE L2 1899 2251 -1063 665 82 10 0 chr17 14066688 14066785 -75437768 + (CAT)n Simple_repeat Simple_repeat 1 98 0 2073 86 32 11 chr17 14068003 14068325 -75436228 + AluSq SINE Alu 1 328 0 2361 103 0 3 chr17 14068647 14068949 -75435604 + AluSx SINE Alu 3 303 -9 570 297 138 67 chr17 14071333 14072346 -75432207 + L1ME3A LINE L1 3950 5034 -1112 537 278 60 43 chr17 14072516 14073019 -75431534 + L1MC/D LINE L1 5258 5780 -477 1776 177 6 6 chr17 14073511 14073839 -75430714 + MLT1A1 LTR MaLR 1 328 -37 230 98 0 24 chr17 14074013 14074054 -75430499 - MLT2C1 LTR ERVL -8 389 350 887 158 19 0 chr17 14074060 14074218 -75430335 - MLT1A2 LTR MaLR -213 161 1 1919 166 0 3 chr17 14074541 14074837 -75429716 - AluJb SINE Alu -17 295 1 244 248 23 39 chr17 14075242 14075371 -75429182 + L1P LINE L1 5293 5419 -735 39 0 0 0 chr17 14075874 14075913 -75428640 + AT_rich Low_complexity Low_complexity 1 39 0 427 247 98 52 chr17 14075940 14076134 -75428419 + L1ME3A LINE L1 5196 5398 -748 295 283 120 37 chr17 14076202 14076576 -75427977 + L1ME3A LINE L1 5486 5890 -280 1035 171 0 0 chr17 14076788 14076952 -75427601 - AluSg/x SINE Alu -12 298 135 528 328 149 9 chr17 14077098 14077548 -75427005 + L1ME4a LINE L1 5320 5831 -290 253 221 39 13 chr17 14077597 14077674 -75426879 + (TATATG)n Simple_repeat Simple_repeat 6 84 0 1568 223 55 26 chr17 14078032 14078417 -75426136 - MSTD LTR MaLR 0 396 1 553 146 0 0 chr17 14078421 14078510 -75426043 - MSTD LTR MaLR -307 89 1 2523 190 42 15 chr17 14078802 14078908 -75425645 - MER74A LTR ERVL 0 558 456 180 0 0 0 chr17 14078908 14078928 -75425625 + (CACAC)n Simple_repeat Simple_repeat 1 20 0 2523 190 42 15 chr17 14078928 14079362 -75425191 - MER74A LTR ERVL -102 456 3 228 197 82 0 chr17 14079818 14079879 -75424674 - L1MB4 LINE L1 -13 6167 6102 1693 154 226 37 chr17 14080241 14080702 -75423851 - LTR10A LTR ERV1 -61 548 1 2488 63 3 0 chr17 14080855 14081154 -75423399 - AluY SINE Alu -11 300 1 1914 156 13 19 chr17 14081253 14081560 -75422993 - AluJo SINE Alu -7 305 1 2086 137 0 0 chr17 14081853 14082145 -75422408 - AluSx SINE Alu -20 292 1 21 0 0 0 chr17 14082161 14082182 -75422371 + AT_rich Low_complexity Low_complexity 1 21 0 1126 224 7 31 chr17 14082182 14082217 -75422336 - L1MB7 LINE L1 -19 6165 6131 1990 118 0 7 chr17 14082217 14082489 -75422064 - AluSx SINE Alu -9 303 34 1126 224 7 31 chr17 14082489 14082739 -75421814 - L1MB7 LINE L1 -53 6131 5887 644 250 85 24 chr17 14083056 14083268 -75421285 + MIR SINE MIR 20 244 -18 2294 115 0 0 chr17 14085087 14085391 -75419162 + AluSq SINE Alu 2 305 -8 305 348 40 45 chr17 14085467 14085668 -75418885 - L2 LINE L2 0 3272 3073 302 286 118 53 chr17 14085828 14086185 -75418368 + L2 LINE L2 2934 3313 0 288 290 14 0 chr17 14087104 14087194 -75417359 - MIR SINE MIR -78 130 35 399 264 62 23 chr17 14087999 14088128 -75416425 + MIR SINE MIR 11 144 -118 2196 100 3 0 chr17 14088385 14088676 -75415877 - AluSg SINE Alu -18 292 1 2498 53 0 3 chr17 14088683 14088986 -75415567 - AluY SINE Alu -6 305 4 2158 117 15 3 chr17 14089549 14089882 -75414671 - L1MC1 LINE L1 0 6333 5997 1957 148 0 13 chr17 14090111 14090409 -75414144 + AluSx SINE Alu 1 294 -18 468 235 31 19 chr17 14090439 14090762 -75413791 + (TA)n Simple_repeat Simple_repeat 1 327 0 249 303 43 19 chr17 14090877 14091039 -75413514 - L1MB7 LINE L1 -2073 5735 5570 597 209 36 75 chr17 14091146 14091402 -75413151 + MER57B LTR ERV1 10 266 -137 402 211 11 0 chr17 14091516 14091606 -75412947 + MER57A LTR ERV1 313 403 0 1869 155 11 3 chr17 14092005 14092289 -75412264 + AluJo SINE Alu 9 294 -18 322 279 132 23 chr17 14093517 14093646 -75410907 - MIR SINE MIR -71 191 49 1642 234 24 53 chr17 14093968 14094277 -75410276 + L1M4 LINE L1 2627 2944 -3202 2229 100 10 6 chr17 14094277 14094588 -75409965 + AluSx SINE Alu 1 312 0 1642 234 24 53 chr17 14094588 14094797 -75409756 + L1M4 LINE L1 2944 3125 -3021 718 172 13 25 chr17 14094797 14094954 -75409599 + L1PB4 LINE L1 5999 6153 -3 1642 234 24 53 chr17 14094954 14095072 -75409481 + L1M4 LINE L1 3125 3245 -2901 21 0 0 0 chr17 14096025 14096046 -75408507 + AT_rich Low_complexity Low_complexity 1 21 0 239 217 17 9 chr17 14097219 14097290 -75407263 - Charlie8 DNA MER1_type -1000 1417 1361 455 299 94 40 chr17 14097325 14097676 -75406877 - Charlie8 DNA MER1_type -1976 441 72 244 250 116 9 chr17 14098059 14098171 -75406382 + L1ME LINE L1 5748 5871 -250 21 57 0 0 chr17 14098258 14098293 -75406260 + AT_rich Low_complexity Low_complexity 1 35 0 371 235 175 49 chr17 14098543 14098726 -75405827 + MLT1J LTR MaLR 3 208 -303 319 263 20 10 chr17 14099453 14099552 -75405001 - L1MCa LINE L1 -6320 106 7 1021 181 87 46 chr17 14099786 14100161 -75404392 + MSTC LTR MaLR 1 428 0 275 311 0 0 chr17 14100436 14100510 -75404043 - MIR SINE MIR -93 115 42 269 373 79 17 chr17 14100541 14100718 -75403835 - MER5A DNA MER1_type -1 188 1 2211 95 7 0 chr17 14100844 14101128 -75403425 + AluSg SINE Alu 1 286 -24 1740 71 0 0 chr17 14101402 14101641 -75402912 + L1PB1 LINE L1 5553 5791 -360 442 61 0 101 chr17 14101641 14101839 -75402714 + (TA)n Simple_repeat Simple_repeat 1 178 0 436 62 10 93 chr17 14101860 14102054 -75402499 + (TA)n Simple_repeat Simple_repeat 2 179 0 332 153 0 0 chr17 14102169 14102228 -75402325 + L1PB1 LINE L1 5793 5851 -300 203 196 22 0 chr17 14102344 14102390 -75402163 + GA-rich Low_complexity Low_complexity 2 48 0 1997 78 85 0 chr17 14102391 14102674 -75401879 + L1PB1 LINE L1 5838 6144 -7 482 282 206 10 chr17 14102697 14102906 -75401647 - MIR SINE MIR -5 257 8 482 290 50 54 chr17 14102998 14103257 -75401296 + MIR SINE MIR 3 260 -2 25 31 0 0 chr17 14103259 14103291 -75401262 + AT_rich Low_complexity Low_complexity 1 32 0 978 117 0 0 chr17 14103484 14103629 -75400924 - L1PB1 LINE L1 -138 6013 5869 217 174 22 0 chr17 14103860 14103906 -75400647 + GA-rich Low_complexity Low_complexity 2 48 0 22 0 0 0 chr17 14104036 14104058 -75400495 + AT_rich Low_complexity Low_complexity 1 22 0 367 323 82 56 chr17 14104102 14104603 -75399950 + L1 LINE L1 4757 5276 -870 2177 109 0 45 chr17 14104603 14104916 -75399637 + AluSc SINE Alu 1 299 -10 367 323 82 56 chr17 14104916 14104972 -75399581 + L1 LINE L1 5276 5329 -817 32 57 0 0 chr17 14105070 14105123 -75399430 + AT_rich Low_complexity Low_complexity 1 53 0 277 211 32 11 chr17 14105160 14105255 -75399298 + L1ME4a LINE L1 6023 6119 -2 290 329 77 43 chr17 14106414 14106648 -75397905 + MIR SINE MIR 6 247 -15 661 298 143 40 chr17 14106742 14107162 -75397391 + L2 LINE L2 2851 3313 0 1420 166 10 30 chr17 14108313 14108609 -75395944 - L1MB8 LINE L1 -5 6173 5884 2252 89 0 0 chr17 14108969 14109291 -75395262 + AluSx SINE Alu 1 322 0 214 239 28 28 chr17 14109814 14109885 -75394668 + L2 LINE L2 2447 2517 -797 205 303 37 37 chr17 14109892 14110001 -75394552 + MIR SINE MIR 80 188 -74 190 267 285 24 chr17 14110053 14110218 -75394335 + MIR SINE MIR 19 226 -36 534 332 81 14 chr17 14111776 14112059 -75392494 - L2 LINE L2 -75 3197 2896 214 381 102 0 chr17 14112147 14112323 -75392230 - L2 LINE L2 -568 2746 2553 462 269 72 0 chr17 14112574 14112741 -75391812 - L1M4 LINE L1 -1341 4805 4627 246 310 43 0 chr17 14112788 14112904 -75391649 + HAL1 LINE L1 1646 1766 -741 504 241 45 0 chr17 14113367 14113500 -75391053 - MIR SINE MIR -60 202 64 334 307 12 60 chr17 14113626 14113792 -75390761 + HAL1b LINE L1 754 911 -437 380 235 62 67 chr17 14114003 14114182 -75390371 - MER5B DNA MER1_type 0 178 1 1768 62 0 0 chr17 14114202 14114412 -75390141 + AluY SINE Alu 1 210 -101 2047 126 36 7 chr17 14114595 14114897 -75389656 - AluSx SINE Alu -1 311 1 1761 68 106 0 chr17 14114919 14115156 -75389397 - AluY SINE Alu -11 300 39 189 426 40 0 chr17 14115881 14115982 -75388571 - MIR SINE MIR -110 152 48 2547 74 0 0 chr17 14116301 14116612 -75387941 - AluY SINE Alu 0 311 1 420 228 0 0 chr17 14116637 14116716 -75387837 + FRAM SINE Alu 66 144 -32 1292 183 8 24 chr17 14116939 14117185 -75387368 + AluJo SINE Alu 39 280 -32 689 186 0 7 chr17 14117191 14117336 -75387217 + GA-rich Low_complexity Low_complexity 1 144 0 2306 249 74 30 chr17 14119480 14120234 -75384319 - MER21B LTR ERV1 -58 805 19 373 220 18 46 chr17 14120232 14120341 -75384212 - MER21B LTR ERV1 -757 106 1 * 2012 97 24 14 chr17 14120515 14120805 -75383748 - AluSq SINE Alu -20 293 1 22 0 0 0 chr17 14120807 14120829 -75383724 + AT_rich Low_complexity Low_complexity 1 22 0 460 345 45 42 chr17 14120860 14121307 -75383246 + HAL1b LINE L1 381 802 -546 2378 86 0 0 chr17 14121804 14122096 -75382457 + AluSx SINE Alu 1 292 -20 326 331 83 0 chr17 14122120 14122374 -75382179 + L1MEc LINE L1 1538 1812 -4584 429 210 74 40 chr17 14122393 14122569 -75381984 + L1MEc LINE L1 1909 2090 -4306 * 1296 248 146 6 chr17 14122557 14123182 -75381371 + L1MEc LINE L1 3194 3905 -2310 1231 105 0 0 chr17 14123732 14123904 -75380649 - AluSc SINE Alu -17 292 121 225 0 0 0 chr17 14123905 14123930 -75380623 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2054 97 0 53 chr17 14123930 14124230 -75380323 - AluSp SINE Alu -29 284 1 3608 188 143 116 chr17 14124326 14124847 -75379706 - L1MD3 LINE L1 -3 7992 7486 583 217 8 0 chr17 14124847 14124967 -75379586 - MLT1F1 LTR MaLR -442 125 5 3608 188 143 116 chr17 14124967 14125892 -75378661 - L1MD3 LINE L1 -509 7486 6385 346 252 105 59 chr17 14126011 14126249 -75378304 - HAL1b LINE L1 -872 476 228 2361 92 13 0 chr17 14126340 14126646 -75377907 + AluSx SINE Alu 1 310 -2 304 189 144 0 chr17 14127713 14127803 -75376750 + MIR SINE MIR 27 129 -133 294 369 81 6 chr17 14128117 14128277 -75376276 - MIR3 SINE MIR -21 187 16 291 368 66 9 chr17 14128887 14129099 -75375454 - MLT1K LTR MaLR -224 364 141 2213 92 0 41 chr17 14129461 14129636 -75374917 - AluSx SINE Alu -9 303 145 2383 66 0 3 chr17 14129636 14129924 -75374629 - AluY SINE Alu -16 295 9 2213 92 0 41 chr17 14129924 14130064 -75374489 - AluSx SINE Alu -167 145 1 217 276 17 0 chr17 14130388 14130446 -75374107 + MIR3 SINE MIR 126 184 -24 257 225 88 61 chr17 14131531 14131646 -75372907 + MIR SINE MIR 19 151 -57 721 229 93 35 chr17 14132331 14132577 -75371976 - MIR SINE MIR -12 250 10 586 256 156 74 chr17 14132811 14132864 -75371689 - MLT1L LTR MaLR -77 538 491 2163 126 0 0 chr17 14132864 14133188 -75371365 - AluSq SINE Alu 0 324 1 586 256 156 74 chr17 14133188 14133512 -75371041 - MLT1L LTR MaLR -124 491 129 234 0 0 0 chr17 14133723 14133749 -75370804 + (CA)n Simple_repeat Simple_repeat 2 27 0 198 196 39 20 chr17 14133804 14133855 -75370698 + MIR SINE MIR 96 147 -115 207 174 0 43 chr17 14133855 14133901 -75370652 + (TTCA)n Simple_repeat Simple_repeat 4 47 0 2527 55 0 3 chr17 14134181 14134492 -75370061 + AluY SINE Alu 1 310 -1 2510 71 0 3 chr17 14135678 14135988 -75368565 - AluSc SINE Alu 0 309 1 180 0 0 0 chr17 14135993 14136013 -75368540 + (T)n Simple_repeat Simple_repeat 1 20 0 186 325 62 25 chr17 14136645 14136725 -75367828 - MIR SINE MIR -90 118 36 694 286 188 14 chr17 14137125 14137711 -75366842 - L2 LINE L2 -3 3310 2614 302 345 36 36 chr17 14138002 14138196 -75366357 - L1ME LINE L1 -394 5727 5534 22 35 0 0 chr17 14138299 14138328 -75366225 + AT_rich Low_complexity Low_complexity 1 29 0 189 0 0 0 chr17 14138625 14138646 -75365907 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 187 397 43 0 chr17 14138744 14138860 -75365693 - L2 LINE L2 -16 3256 3136 545 236 74 83 chr17 14139110 14139326 -75365227 + MER58C DNA MER1_type 1 214 -1 431 180 328 32 chr17 14141527 14141716 -75362837 - MLT1G LTR MaLR -24 566 322 323 241 96 24 chr17 14141799 14141882 -75362671 - MLT1G LTR MaLR -381 168 80 410 175 25 0 chr17 14141953 14142033 -75362520 + MER31B LTR ERV1 1 82 -384 2424 230 38 44 chr17 14142033 14142698 -75361855 + MER67B LTR ERV1 1 661 0 525 352 146 12 chr17 14142699 14143193 -75361360 - L2 LINE L2 -700 2614 2055 198 246 119 32 chr17 14143290 14143416 -75361137 - L2 LINE L2 -1883 1431 1295 2178 99 3 40 chr17 14144791 14145114 -75359439 + AluY SINE Alu 1 311 0 234 62 0 0 chr17 14145121 14145153 -75359400 + (TA)n Simple_repeat Simple_repeat 2 33 0 1563 63 0 0 chr17 14145157 14145347 -75359206 - L1P4 LINE L1 -456 5712 5523 240 163 0 0 chr17 14145348 14145391 -75359162 + (TA)n Simple_repeat Simple_repeat 1 43 0 301 286 55 0 chr17 14145397 14145488 -75359065 + L1MC4 LINE L1 6607 6702 -1340 2239 92 0 10 chr17 14145718 14146010 -75358543 + AluSc SINE Alu 1 289 -20 406 295 6 60 chr17 14146071 14146237 -75358316 - MIR SINE MIR -2 260 104 202 283 11 144 chr17 14146405 14146592 -75357961 - L2 LINE L2 -186 3086 2925 552 237 71 12 chr17 14146625 14146794 -75357759 - MER104 DNA MER2_type -1 179 1 2152 107 21 3 chr17 14146820 14147109 -75357444 - AluSq SINE Alu -19 294 1 1914 110 4 18 chr17 14147374 14147646 -75356907 - L1PA10 LINE L1 0 6168 5901 2892 53 68 35 chr17 14147646 14147689 -75356864 + L1PA10 LINE L1 5451 5491 -677 2040 127 7 0 chr17 14147689 14147980 -75356573 + AluSx SINE Alu 3 295 -17 2892 53 68 35 chr17 14147980 14148332 -75356221 + L1PA10 LINE L1 5491 5859 -309 308 227 43 43 chr17 14148332 14148473 -75356080 - MER113 DNA MER1_type? -349 172 32 213 313 10 10 chr17 14148499 14148598 -75355955 - L2 LINE L2 -1052 2262 2164 192 191 0 24 chr17 14148944 14148986 -75355567 - L2 LINE L2 -6 3307 3267 584 215 6 0 chr17 14149701 14149864 -75354689 + (TAGA)n Simple_repeat Simple_repeat 2 165 0 195 290 29 0 chr17 14149960 14150029 -75354524 + MIR SINE MIR 79 149 -113 328 313 124 39 chr17 14150071 14150304 -75354249 - MIR SINE MIR 0 262 10 584 113 0 0 chr17 14150895 14150975 -75353578 + MADE1 DNA Mariner 1 80 0 237 132 0 0 chr17 14151211 14151249 -75353304 + (TATG)n Simple_repeat Simple_repeat 3 40 0 2255 94 6 38 chr17 14151427 14151746 -75352807 - AluSp SINE Alu -4 309 1 372 273 68 37 chr17 14153229 14153390 -75351163 - MIR SINE MIR -89 173 8 1792 172 48 12 chr17 14153896 14154228 -75350325 - MER7A DNA MER2_type -3 343 2 258 376 106 35 chr17 14154231 14154486 -75350067 + L2 LINE L2 2999 3271 -1 641 280 95 13 chr17 14155201 14155436 -75349117 - MIR SINE MIR 0 262 5 2434 80 3 6 chr17 14155579 14155891 -75348662 + AluY SINE Alu 1 311 0 180 154 0 0 chr17 14156625 14156651 -75347902 - L3b LINE CR1 -264 1319 1294 309 290 122 19 chr17 14157886 14157993 -75346560 + MIR SINE MIR 6 123 -139 21 71 0 0 chr17 14158769 14158811 -75345742 + AT_rich Low_complexity Low_complexity 1 42 0 2282 108 0 3 chr17 14159101 14159407 -75345146 + AluSx SINE Alu 1 305 -7 711 179 16 65 chr17 14159714 14159898 -75344655 + MER53 DNA DNA 1 175 -14 994 87 0 16 chr17 14160600 14160726 -75343827 - AluSq/x SINE Alu -189 124 1 27 0 0 0 chr17 14160727 14160754 -75343799 + AT_rich Low_complexity Low_complexity 1 27 0 209 254 51 0 chr17 14162861 14162920 -75341633 + L3 LINE CR1 1516 1577 0 524 143 0 11 chr17 14163482 14163573 -75340980 - L1MA3 LINE L1 0 6305 6216 300 268 37 0 chr17 14163588 14163670 -75340883 - MIR SINE MIR -108 154 70 2289 80 23 7 chr17 14163923 14164225 -75340328 - AluY SINE Alu -4 307 1 291 28 0 0 chr17 14164416 14164452 -75340101 + (TG)n Simple_repeat Simple_repeat 1 36 0 1239 216 79 16 chr17 14164600 14164905 -75339648 + MER2 DNA MER2_type 22 345 0 250 300 112 58 chr17 14165059 14165372 -75339181 - L1MC/D LINE L1 -2150 5658 5329 5243 235 90 10 chr17 14165517 14167712 -75336841 - L1ME3 LINE L1 -2 6160 3690 370 225 44 131 chr17 14167721 14167756 -75336797 + LTR41 LTR ERVL 549 585 -188 324 48 0 0 chr17 14167756 14167798 -75336755 + (TG)n Simple_repeat Simple_repeat 2 43 0 370 225 44 131 chr17 14167798 14167922 -75336631 + LTR41 LTR ERVL 585 694 -79 743 246 11 6 chr17 14168154 14168329 -75336224 - MER58A DNA MER1_type -12 212 37 2350 84 3 0 chr17 14168649 14168946 -75335607 - AluSp SINE Alu -15 298 1 480 266 130 16 chr17 14168971 14169155 -75335398 + MIR SINE MIR 7 211 -51 22 0 0 0 chr17 14169235 14169257 -75335296 + AT_rich Low_complexity Low_complexity 1 22 0 361 193 53 70 chr17 14169683 14169696 -75334857 - L1MC4 LINE L1 -124 7918 7906 396 0 0 0 chr17 14169696 14169740 -75334813 + (CTATT)n Simple_repeat Simple_repeat 1 44 0 361 193 53 70 chr17 14169740 14169840 -75334713 - L1MC4 LINE L1 -136 7906 7807 2297 64 0 3 chr17 14169841 14170159 -75334394 + AluY SINE Alu 1 317 0 675 167 54 40 chr17 14170167 14170348 -75334205 - MER31B LTR ERV1 -250 235 7 2296 106 0 3 chr17 14170414 14170725 -75333828 + AluSg SINE Alu 1 310 0 1350 198 156 70 chr17 14171976 14172405 -75332148 - MER31B LTR ERV1 0 466 1 271 309 29 51 chr17 14172675 14172850 -75331703 - MLT1K LTR MaLR -6 582 412 2491 61 3 0 chr17 14173236 14173533 -75331020 + AluY SINE Alu 1 298 -13 2444 80 0 0 chr17 14174087 14174388 -75330165 + AluY SINE Alu 1 301 -10 2007 192 14 11 chr17 14176251 14176610 -75327943 + MLT1A1 LTR MaLR 4 363 -2 772 227 23 0 chr17 14177871 14178047 -75326506 + MER5A DNA MER1_type 7 186 -3 181 316 0 51 chr17 14178098 14178177 -75326376 + L2 LINE L2 3198 3272 0 238 295 36 86 chr17 14178216 14178355 -75326198 - MER5A DNA MER1_type -2 187 56 312 48 0 0 chr17 14178682 14178724 -75325829 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 1738 139 15 7 chr17 14178735 14179009 -75325544 - AluJb SINE Alu -36 276 1 250 200 148 17 chr17 14181476 14181591 -75322962 - MER113 DNA MER1_type? -349 172 43 3484 200 24 48 chr17 14181930 14182110 -75322443 + L1MB8 LINE L1 5145 5328 -850 2144 138 0 0 chr17 14182110 14182414 -75322139 + AluSx SINE Alu 3 306 -6 3484 200 24 48 chr17 14182414 14183277 -75321276 + L1MB8 LINE L1 5328 6178 0 6136 129 14 9 chr17 14183516 14185009 -75319544 + L1PB1 LINE L1 4667 6170 0 234 377 74 0 chr17 14185145 14185267 -75319286 + L2 LINE L2 3137 3267 -5 2153 129 126 0 chr17 14186224 14186604 -75317949 + MSTA LTR MaLR 1 428 0 3246 178 32 16 chr17 14186633 14187312 -75317241 - L1MB5 LINE L1 -9 6165 5476 409 121 0 30 chr17 14187344 14187410 -75317143 - L1PA8A LINE L1 -6 6125 6062 1591 65 0 0 chr17 14187410 14187625 -75316928 + L1PA8A LINE L1 5845 6059 -72 1391 187 70 6 chr17 14187622 14188108 -75316445 - L1MB5 LINE L1 -709 5471 4961 * 2430 229 18 42 chr17 14188111 14188890 -75315663 - L1MB5 LINE L1 -1616 4530 3771 1649 108 0 0 chr17 14189132 14189344 -75315209 + AluSq SINE Alu 1 212 -101 384 232 33 93 chr17 14189541 14189692 -75314861 - MLT1G LTR MaLR -7 583 442 966 303 22 38 chr17 14191352 14191801 -75312752 + LTR16B LTR ERVL 23 464 0 253 313 12 12 chr17 14192499 14192579 -75311974 + MIR SINE MIR 58 137 -71 217 227 0 0 chr17 14194384 14194428 -75310125 + (CA)n Simple_repeat Simple_repeat 2 45 0 182 302 93 47 chr17 14194489 14194618 -75309935 - L2 LINE L2 0 3313 3179 467 279 0 62 chr17 14196304 14196465 -75308088 + MER63A DNA MER1_type 60 210 0 1985 148 48 31 chr17 14196871 14197229 -75307324 + THE1B LTR MaLR 1 364 0 2281 79 4 0 chr17 14198098 14198397 -75306156 + AluSp SINE Alu 6 305 0 232 190 152 25 chr17 14198961 14199040 -75305513 + MIR SINE MIR 164 252 -10 479 360 50 4 chr17 14199114 14199356 -75305197 + MIR SINE MIR 2 254 -8 364 150 0 83 chr17 14200087 14200280 -75304273 + (TA)n Simple_repeat Simple_repeat 2 178 0 542 155 0 64 chr17 14200319 14200506 -75304047 + (TA)n Simple_repeat Simple_repeat 2 176 0 328 195 0 77 chr17 14200543 14200738 -75303815 + (TA)n Simple_repeat Simple_repeat 1 180 0 310 181 0 106 chr17 14200778 14200977 -75303576 + (TA)n Simple_repeat Simple_repeat 1 178 0 358 151 0 80 chr17 14200982 14201273 -75303280 + (TATATG)n Simple_repeat Simple_repeat 1 267 0 319 204 0 68 chr17 14201281 14201472 -75303081 + (TA)n Simple_repeat Simple_repeat 1 178 0 547 158 0 86 chr17 14201514 14201915 -75302638 + (TA)n Simple_repeat Simple_repeat 1 366 0 520 131 0 106 chr17 14201952 14202151 -75302402 + (TA)n Simple_repeat Simple_repeat 1 178 0 619 177 0 32 chr17 14202187 14202373 -75302180 + (TA)n Simple_repeat Simple_repeat 1 180 0 2614 55 0 0 chr17 14203305 14203616 -75300937 + AluY SINE Alu 1 311 0 2099 130 3 0 chr17 14203864 14204149 -75300404 - AluSx SINE Alu -21 291 6 231 336 112 15 chr17 14207761 14207895 -75296658 - MIR SINE MIR 0 262 116 306 363 0 0 chr17 14208118 14208264 -75296289 + MER117 DNA MER1_type 1 146 -51 1947 164 73 168 chr17 14208553 14209356 -75295197 + LTR8A LTR ERV1 1 727 0 222 62 0 0 chr17 14209579 14209611 -75294942 + (TG)n Simple_repeat Simple_repeat 2 33 0 255 286 26 0 chr17 14210272 14210349 -75294204 - MIR3 SINE MIR -6 202 124 1510 211 76 110 chr17 14210350 14210904 -75293649 + MLT1E LTR MaLR 1 535 -58 1669 246 47 11 chr17 14211027 14211475 -75293078 + MLT1C LTR MaLR 1 464 -3 258 136 0 0 chr17 14211596 14211640 -75292913 + (GA)n Simple_repeat Simple_repeat 1 44 0 1024 221 64 15 chr17 14211845 14212348 -75292205 + L1MEc LINE L1 2101 2587 -3628 325 283 28 14 chr17 14212346 14212491 -75292062 + L1MA10 LINE L1 6180 6326 -8 * 2053 153 129 0 chr17 14212630 14213009 -75291544 + MSTA LTR MaLR 1 428 0 7899 173 34 36 chr17 14213011 14214593 -75289960 + MSTA-int LTR MaLR 3 1580 0 2190 152 123 0 chr17 14214593 14214974 -75289579 + MSTA LTR MaLR 1 428 0 21 89 0 0 chr17 14215006 14215062 -75289491 + AT_rich Low_complexity Low_complexity 1 56 0 304 289 133 16 chr17 14216869 14216997 -75287556 - MIR3 SINE MIR -21 187 45 1807 220 0 8 chr17 14217206 14217574 -75286979 + MLT1A1 LTR MaLR 1 365 0 791 217 111 24 chr17 14217869 14218076 -75286477 - MIR SINE MIR -26 236 12 1866 182 3 3 chr17 14218457 14218759 -75285794 + AluJb SINE Alu 1 302 -10 2338 95 0 3 chr17 14218826 14219130 -75285423 + AluSq SINE Alu 1 303 -10 336 261 59 8 chr17 14219173 14219292 -75285261 - MER69A DNA AcHobo -26 151 27 1159 142 75 12 chr17 14219976 14220216 -75284337 + L1MB3 LINE L1 5929 6183 0 488 142 26 9 chr17 14221348 14221360 -75283193 + (TA)n Simple_repeat Simple_repeat 2 12 -104 1958 123 11 7 chr17 14221360 14221644 -75282909 + AluSx SINE Alu 1 285 -27 488 142 26 9 chr17 14221644 14221744 -75282809 + (TA)n Simple_repeat Simple_repeat 12 116 0 2453 79 13 0 chr17 14222608 14222911 -75281642 + AluY SINE Alu 1 307 -4 817 78 66 6 chr17 14225400 14225567 -75278986 + GA-rich Low_complexity Low_complexity 2 178 0 647 250 61 25 chr17 14225729 14225925 -75278628 - MER20 DNA MER1_type -16 203 1 200 373 0 13 chr17 14226253 14226328 -75278225 + L3 LINE CR1 1497 1570 -7 324 218 0 26 chr17 14228456 14228534 -75276019 + MIR SINE MIR 86 161 -101 34 42 0 0 chr17 14229013 14229061 -75275492 + AT_rich Low_complexity Low_complexity 1 48 0 578 281 51 18 chr17 14229746 14229963 -75274590 + MIR SINE MIR 17 240 -22 372 263 53 74 chr17 14230867 14231057 -75273496 - L1MC5 LINE L1 -48 7913 7728 3863 154 16 3 chr17 14231150 14231791 -75272762 + MER39B LTR ERV1 4 652 -1 493 68 96 0 chr17 14233123 14233196 -75271357 + MADE1 DNA Mariner 1 80 0 295 70 0 0 chr17 14233197 14233240 -75271313 + MADE1 DNA Mariner 38 80 0 230 351 77 51 chr17 14233513 14233708 -75270845 + L3b LINE CR1 1114 1303 -280 2305 161 54 2 chr17 14233708 14234131 -75270422 + L1MB2 LINE L1 5712 6156 -15 596 149 52 45 chr17 14234131 14234257 -75270296 + L1MB2 LINE L1 6037 6171 0 230 351 77 51 chr17 14234257 14234373 -75270180 + L3b LINE CR1 1302 1434 -149 2265 99 13 0 chr17 14235765 14236068 -75268485 + AluSc SINE Alu 1 307 -2 1563 122 15 4 chr17 14236184 14236447 -75268106 + L1MA5 LINE L1 6035 6300 0 1749 268 82 15 chr17 14236471 14236899 -75267654 + L1ME3A LINE L1 5373 5874 -296 2110 109 3 17 chr17 14236899 14237201 -75267352 + AluSg SINE Alu 1 298 -12 1749 268 82 15 chr17 14237201 14237515 -75267038 + L1ME3A LINE L1 5874 6165 -5 269 235 35 47 chr17 14237892 14237977 -75266576 - MIR SINE MIR -95 167 84 2392 76 3 13 chr17 14238610 14238913 -75265640 + AluSg SINE Alu 1 300 -10 21 0 0 0 chr17 14238945 14238966 -75265587 + AT_rich Low_complexity Low_complexity 1 21 0 493 321 74 0 chr17 14239084 14239246 -75265307 + MIR3 SINE MIR 23 196 -12 2041 94 6 44 chr17 14239641 14239961 -75264592 + AluSx SINE Alu 1 308 -4 520 262 71 27 chr17 14240124 14240317 -75264236 - MIR SINE MIR -60 148 1 190 337 11 11 chr17 14241426 14241518 -75263035 + L2 LINE L2 2130 2221 -1093 230 232 0 110 chr17 14241805 14241887 -75262666 + MER96 DNA MER1_type? 103 175 0 236 176 0 20 chr17 14242133 14242184 -75262369 + HAL1 LINE L1 1633 1682 -825 211 184 40 40 chr17 14242452 14242528 -75262025 + GA-rich Low_complexity Low_complexity 1 76 0 456 344 59 27 chr17 14242590 14242776 -75261777 - MIR3 SINE MIR -14 194 3 1127 121 0 0 chr17 14243575 14243732 -75260821 - AluSg/x SINE Alu -16 296 140 2744 223 92 30 chr17 14243978 14244862 -75259691 + Zaphod DNA AcHobo 15 952 -3079 2270 8 0 0 chr17 14244947 14245194 -75259359 + AluYb8 SINE Alu 64 310 -8 881 191 6 0 chr17 14245195 14245368 -75259185 + L1MB5 LINE L1 5908 6081 -93 588 271 47 0 chr17 14245371 14245541 -75259012 + MER58A DNA MER1_type 47 224 0 1729 189 50 12 chr17 14245549 14245968 -75258585 + Zaphod DNA AcHobo 3595 4029 -2 312 316 92 9 chr17 14246302 14246637 -75257916 - L1ME4a LINE L1 -29 6092 5730 24 0 0 0 chr17 14246764 14246788 -75257765 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr17 14247244 14247265 -75257288 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 14247295 14247318 -75257235 + AT_rich Low_complexity Low_complexity 1 23 0 450 133 0 27 chr17 14247468 14247543 -75257010 + AluS SINE Alu 1 73 -245 273 227 136 45 chr17 14247577 14247687 -75256866 + L1ME1 LINE L1 5971 6090 -76 1967 136 7 0 chr17 14248040 14248326 -75256227 - AluSx SINE Alu -24 288 1 1937 215 47 41 chr17 14248348 14248895 -75255658 - L1MC/D LINE L1 -743 5403 5275 2026 114 0 4 chr17 14248895 14249207 -75255346 + AluSg SINE Alu 1 311 0 1937 215 47 41 chr17 14249207 14249423 -75255130 - L1MC/D LINE L1 -871 5275 5062 1580 69 0 0 chr17 14249664 14249852 -75254701 - AluY SINE Alu -123 188 1 301 336 108 42 chr17 14250144 14250358 -75254195 - L2 LINE L2 -5 3267 3040 2082 133 27 0 chr17 14250509 14250810 -75253743 - AluSx SINE Alu -3 309 1 483 317 57 54 chr17 14250988 14251322 -75253231 + L1MC4a LINE L1 5617 5951 -1857 851 254 144 74 chr17 14251370 14251842 -75252711 + MLT1H LTR MaLR 29 533 -16 233 261 45 11 chr17 14251876 14251964 -75252589 + L1ME4a LINE L1 5947 6037 -84 273 57 0 0 chr17 14252410 14252445 -75252108 + (ATG)n Simple_repeat Simple_repeat 2 36 0 253 289 117 23 chr17 14252849 14252977 -75251576 + MIR SINE MIR 50 189 -73 2064 113 11 11 chr17 14253469 14253751 -75250802 - AluSx SINE Alu -3 309 28 838 174 35 91 chr17 14254696 14254926 -75249627 - MER20 DNA MER1_type -2 217 1 266 196 49 84 chr17 14254927 14255070 -75249483 - MER112 DNA MER1_type -57 203 66 428 48 16 0 chr17 14255686 14255749 -75248804 + (CA)n Simple_repeat Simple_repeat 1 64 0 22 80 0 0 chr17 14256936 14256986 -75247567 + AT_rich Low_complexity Low_complexity 1 50 0 1700 143 44 0 chr17 14257139 14257412 -75247141 - AluJb SINE Alu -27 285 1 635 212 13 7 chr17 14257538 14257689 -75246864 + L1MD2 LINE L1 6191 6342 -17 387 330 36 36 chr17 14257715 14257909 -75246644 - L1M4 LINE L1 -3637 2509 2316 369 0 0 0 chr17 14259341 14259382 -75245171 + (TA)n Simple_repeat Simple_repeat 2 42 0 2479 72 3 19 chr17 14259501 14259819 -75244734 - AluSp SINE Alu 0 313 1 294 246 35 35 chr17 14261146 14261260 -75243293 + LTR16A LTR ERVL 1 114 -336 339 267 176 6 chr17 14261360 14261525 -75243028 + LTR16A LTR ERVL 247 439 -11 209 288 98 83 chr17 14261569 14261833 -75242720 - L2 LINE L2 -188 3084 2817 21 71 0 0 chr17 14262293 14262335 -75242218 + AT_rich Low_complexity Low_complexity 1 42 0 285 29 0 0 chr17 14262872 14262906 -75241647 + (CA)n Simple_repeat Simple_repeat 2 35 0 441 311 68 6 chr17 14263226 14263403 -75241150 - MIR SINE MIR -56 206 19 189 0 0 0 chr17 14265773 14265794 -75238759 + (CA)n Simple_repeat Simple_repeat 2 22 0 240 290 48 81 chr17 14265858 14265982 -75238571 + MIR SINE MIR 88 207 -55 208 341 23 11 chr17 14266141 14266229 -75238324 - MIR SINE MIR -6 256 168 186 264 103 35 chr17 14267039 14267126 -75237427 + MIR SINE MIR 126 218 -44 2833 203 42 25 chr17 14267239 14267290 -75237263 + MER82 DNA MER2_type 1 50 -603 1591 158 0 79 chr17 14267290 14267606 -75236947 + AluJb SINE Alu 3 293 -19 2236 102 0 0 chr17 14267610 14267922 -75236631 + AluSp SINE Alu 1 312 0 2833 203 42 25 chr17 14267922 14268506 -75236047 + MER82 DNA MER2_type 52 653 0 585 230 5 97 chr17 14269583 14269779 -75234774 + MER45A DNA AcHobo 1 178 0 180 0 0 0 chr17 14269948 14269968 -75234585 + (TCCA)n Simple_repeat Simple_repeat 3 22 0 909 272 139 25 chr17 14271726 14272164 -75232389 - MLT1H1 LTR MaLR -7 548 61 211 233 0 0 chr17 14273302 14273345 -75231208 + MIR3 SINE MIR 162 204 -4 1390 196 40 61 chr17 14274802 14274912 -75229641 + MLT1B LTR MaLR 5 116 -274 2059 139 3 7 chr17 14274912 14275214 -75229339 + AluSx SINE Alu 1 301 -11 1390 196 40 61 chr17 14275214 14275481 -75229072 + MLT1B LTR MaLR 116 374 -16 3264 192 52 28 chr17 14275518 14276233 -75228320 + MER21B LTR ERV1 19 750 -113 500 293 28 42 chr17 14276346 14276417 -75228136 + L3 LINE CR1 1207 1277 -300 653 50 0 0 chr17 14276417 14276497 -75228056 + MADE1 DNA Mariner 1 80 0 500 293 28 42 chr17 14276497 14276637 -75227916 + L3 LINE CR1 1277 1415 -162 246 280 160 0 chr17 14276749 14276849 -75227704 + MIR SINE MIR 13 128 -134 1881 123 7 18 chr17 14278585 14278861 -75225692 + AluSx SINE Alu 25 297 -15 2247 114 7 7 chr17 14279124 14279432 -75225121 - AluSc SINE Alu -1 308 1 281 173 77 0 chr17 14279646 14279698 -75224855 + L2 LINE L2 3216 3271 -1 311 290 100 0 chr17 14279766 14279866 -75224687 + MER103 DNA DNA 57 166 0 3091 218 56 22 chr17 14280090 14280802 -75223751 + MER21B LTR ERV1 21 756 -107 1457 237 31 20 chr17 14281003 14281357 -75223196 - MLT1A2 LTR MaLR -12 362 5 6614 84 11 2 chr17 14281474 14282293 -75222260 + LTR12 LTR ERV1 1 826 0 283 194 117 48 chr17 14282841 14282944 -75221609 + MER103 DNA DNA 2 111 -55 216 0 0 0 chr17 14283022 14283046 -75221507 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 897 256 104 42 chr17 14283111 14283497 -75221056 + MLT1J2 LTR MaLR 3 412 -38 368 224 55 91 chr17 14283502 14283574 -75220979 - MER96B DNA MER1_type? 0 417 344 261 0 0 0 chr17 14283574 14283603 -75220950 + (CAA)n Simple_repeat Simple_repeat 2 30 0 368 224 55 91 chr17 14283603 14283653 -75220900 - MER96B DNA MER1_type? -73 344 300 2361 71 3 0 chr17 14283653 14283949 -75220604 + AluY SINE Alu 1 297 -14 368 224 55 91 chr17 14283949 14283990 -75220563 - MER96B DNA MER1_type? -117 300 259 1631 104 0 9 chr17 14283992 14284270 -75220283 + AluSc SINE Alu 60 335 0 2396 88 0 10 chr17 14284940 14285247 -75219306 - AluSg SINE Alu -6 304 1 2255 76 0 3 chr17 14289092 14289424 -75215129 + AluY SINE Alu 1 331 0 2312 88 0 0 chr17 14289438 14289733 -75214820 + AluSg SINE Alu 1 295 -15 376 331 7 0 chr17 14290820 14290968 -75213585 + HAL1b LINE L1 381 529 -819 919 217 6 6 chr17 14290998 14291173 -75213380 + FAM SINE Alu 1 175 0 22 0 0 0 chr17 14291232 14291254 -75213299 + AT_rich Low_complexity Low_complexity 1 22 0 542 260 28 126 chr17 14291779 14292064 -75212489 + MIR SINE MIR 4 260 -2 321 177 30 67 chr17 14292311 14292475 -75212078 + (TTATA)n Simple_repeat Simple_repeat 2 159 0 261 0 0 0 chr17 14292682 14292711 -75211842 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 642 222 72 57 chr17 14292818 14292874 -75211679 - L1MC4 LINE L1 0 8042 7988 2462 80 3 0 chr17 14292874 14293185 -75211368 + AluSx SINE Alu 1 312 0 642 222 72 57 chr17 14293185 14293407 -75211146 - L1MC4 LINE L1 -54 7988 7760 521 294 17 28 chr17 14293909 14294089 -75210464 + MER5B DNA MER1_type 1 178 0 2091 124 0 23 chr17 14294252 14294558 -75209995 - AluSg SINE Alu -11 299 1 22 56 0 0 chr17 14296803 14296839 -75207714 + AT_rich Low_complexity Low_complexity 1 36 0 1403 146 0 5 chr17 14297247 14297460 -75207093 + MER2 DNA MER2_type 1 212 -133 239 225 0 0 chr17 14297511 14297551 -75207002 + MER2 DNA MER2_type 296 335 -10 2167 130 7 7 chr17 14297578 14297886 -75206667 - AluSx SINE Alu -2 310 3 2074 119 19 19 chr17 14298122 14298434 -75206119 + AluJb SINE Alu 1 312 0 555 291 53 102 chr17 14298709 14298904 -75205649 - L1MEd LINE L1 -4967 1152 949 16099 125 28 15 chr17 14298904 14301290 -75203263 + Tigger1 DNA MER2_type 1 2418 0 555 291 53 102 chr17 14301290 14301964 -75202589 - L1MEd LINE L1 -5170 949 326 1502 190 44 3 chr17 14303341 14303636 -75200917 - AluJb SINE Alu -5 307 1 180 0 0 0 chr17 14303721 14303741 -75200812 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 410 312 53 32 chr17 14304050 14304239 -75200314 - MARNA DNA Mariner -358 228 36 1931 152 3 0 chr17 14304623 14304925 -75199628 - AluSx SINE Alu -9 303 1 232 354 69 8 chr17 14305094 14305224 -75199329 - MIR3 SINE MIR -38 170 33 271 256 22 44 chr17 14305598 14305688 -75198865 - L2 LINE L2 -8 3305 3218 1283 228 70 31 chr17 14306564 14306919 -75197634 + MLT1A2 LTR MaLR 5 373 -1 2076 96 64 3 chr17 14307001 14307283 -75197270 - AluSx SINE Alu -13 299 1 2259 109 0 0 chr17 14307303 14307607 -75196946 + AluY SINE Alu 1 304 -7 882 239 28 0 chr17 14308795 14308971 -75195582 + MER5A DNA MER1_type 9 189 0 1539 250 109 42 chr17 14308998 14309522 -75195031 - MLT1F1 LTR MaLR -8 559 1 2848 118 0 0 chr17 14309762 14310126 -75194427 - THE1B LTR MaLR 0 364 1 273 340 26 26 chr17 14310461 14310614 -75193939 - MIR3 SINE MIR -5 203 51 198 0 0 0 chr17 14310734 14310756 -75193797 + (TG)n Simple_repeat Simple_repeat 2 23 0 841 288 39 10 chr17 14310798 14311104 -75193449 + L1ME4a LINE L1 5513 5827 -294 2060 104 3 50 chr17 14311132 14311449 -75193104 + AluSx SINE Alu 1 302 -10 210 328 78 0 chr17 14311526 14311590 -75192963 + L2 LINE L2 3204 3272 0 21 0 0 0 chr17 14311875 14311896 -75192657 + AT_rich Low_complexity Low_complexity 1 21 0 534 236 69 58 chr17 14312005 14312243 -75192310 + L1ME LINE L1 5505 5745 -376 2225 119 3 3 chr17 14312285 14312595 -75191958 + AluSx SINE Alu 1 310 -2 1211 103 139 5 chr17 14312646 14312840 -75191713 + AluSg/x SINE Alu 92 311 -1 270 104 0 119 chr17 14313313 14313380 -75191173 + L1MA7 LINE L1 6231 6289 -2 26 0 0 0 chr17 14313381 14313407 -75191146 + AT_rich Low_complexity Low_complexity 1 26 0 2282 103 7 0 chr17 14313477 14313779 -75190774 + AluSp SINE Alu 1 304 -9 23 0 0 0 chr17 14313962 14313985 -75190568 + AT_rich Low_complexity Low_complexity 1 23 0 1844 121 0 0 chr17 14314102 14314350 -75190203 + AluSx SINE Alu 52 299 -13 198 167 19 111 chr17 14314642 14314696 -75189857 + L3 LINE CR1 1523 1571 -6 989 98 0 7 chr17 14317318 14317471 -75187082 + (GGAA)n Simple_repeat Simple_repeat 4 155 0 2573 80 0 0 chr17 14318054 14318366 -75186187 - AluSx SINE Alu 0 312 1 216 303 184 53 chr17 14318645 14318707 -75185846 + L2 LINE L2 2336 2388 -926 2304 85 7 7 chr17 14318707 14319013 -75185540 - AluSc SINE Alu -3 306 1 216 303 184 53 chr17 14319013 14319330 -75185223 + L2 LINE L2 2388 2765 -549 1308 196 21 55 chr17 14319351 14319452 -75185101 + MER33 DNA MER1_type 10 113 -2472 2485 58 0 10 chr17 14319452 14319764 -75184789 + AluY SINE Alu 1 309 -2 1308 196 21 55 chr17 14319764 14319988 -75184565 + MER33 DNA MER1_type 113 324 0 2352 90 0 0 chr17 14320040 14320330 -75184223 + AluSc SINE Alu 1 290 -19 954 205 74 33 chr17 14320947 14321162 -75183391 + MER58A DNA MER1_type 1 224 0 288 224 6 138 chr17 14321371 14321545 -75183008 + MER112 DNA MER1_type 8 158 -102 2012 62 82 4 chr17 14321556 14321813 -75182740 - AluY SINE Alu -18 293 17 350 264 120 0 chr17 14322064 14322189 -75182364 + Charlie8 DNA MER1_type 127 266 -2151 204 40 0 0 chr17 14322533 14322558 -75181995 + (CA)n Simple_repeat Simple_repeat 2 26 0 2156 125 3 3 chr17 14323901 14324213 -75180340 - AluSx SINE Alu 0 312 1 2155 135 0 3 chr17 14324515 14324826 -75179727 - AluSx SINE Alu -2 310 1 420 248 44 24 chr17 14325024 14325158 -75179395 + MIR SINE MIR 26 162 -65 180 0 0 0 chr17 14326100 14326120 -75178433 + (A)n Simple_repeat Simple_repeat 1 20 0 2196 200 52 40 chr17 14326573 14327148 -75177405 - L1MD3 LINE L1 -11 7984 7403 279 0 0 0 chr17 14328713 14328744 -75175809 + (TTG)n Simple_repeat Simple_repeat 1 31 0 279 0 0 0 chr17 14329285 14329316 -75175237 + (CA)n Simple_repeat Simple_repeat 2 32 0 201 283 0 0 chr17 14330056 14330109 -75174444 + (TA)n Simple_repeat Simple_repeat 1 53 0 24 0 0 0 chr17 14333680 14333704 -75170849 + GC_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr17 14334703 14334723 -75169830 + (GGCTG)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr17 14335603 14335626 -75168927 + AT_rich Low_complexity Low_complexity 1 23 0 270 0 0 0 chr17 14335697 14335727 -75168826 + (TG)n Simple_repeat Simple_repeat 1 30 0 211 172 259 0 chr17 14336597 14336655 -75167898 + MIR3 SINE MIR 118 190 -18 1295 162 14 22 chr17 14336847 14337069 -75167484 - AluJb SINE Alu -12 300 81 1036 187 66 19 chr17 14337076 14337333 -75167220 - MER33 DNA MER1_type -54 270 2 423 289 144 26 chr17 14337361 14337555 -75166998 - LTR33 LTR ERVL 0 521 305 330 146 0 0 chr17 14337952 14338007 -75166546 - MLT2B2 LTR ERVL -2 513 459 2324 182 69 52 chr17 14338031 14338337 -75166216 - MLT2B3 LTR ERVL -22 532 212 2325 104 0 0 chr17 14338337 14338635 -75165918 + AluSx SINE Alu 1 298 -14 2324 182 69 52 chr17 14338635 14338851 -75165702 - MLT2B3 LTR ERVL -342 212 1 285 243 18 45 chr17 14339622 14339733 -75164820 - LTR33 LTR ERVL -338 183 76 2412 93 3 0 chr17 14339930 14340240 -75164313 - AluSp SINE Alu -2 311 1 301 285 96 105 chr17 14340263 14340596 -75163957 + L2 LINE L2 2938 3267 -5 2017 113 39 0 chr17 14340655 14340939 -75163614 + AluSp SINE Alu 6 300 -13 2326 95 20 0 chr17 14341452 14341756 -75162797 + AluSg SINE Alu 1 310 0 240 111 0 0 chr17 14342163 14342199 -75162354 + (A)n Simple_repeat Simple_repeat 1 36 0 23 33 0 0 chr17 14342325 14342355 -75162198 + AT_rich Low_complexity Low_complexity 1 30 0 445 291 16 8 chr17 14342420 14342547 -75162006 + MER91B DNA MER1_type 50 177 -13 760 302 178 10 chr17 14342686 14343103 -75161450 + MLT1K LTR MaLR 40 526 -62 1873 176 0 0 chr17 14343172 14343478 -75161075 - AluJb SINE Alu -6 306 1 1044 113 0 0 chr17 14343545 14343686 -75160867 - AluY SINE Alu -9 302 162 182 390 55 20 chr17 14344340 14344540 -75160013 - L2 LINE L2 -657 2657 2451 482 191 162 7 chr17 14345350 14345486 -75159067 - MER103 DNA DNA -7 159 3 1738 225 69 29 chr17 14348284 14348733 -75155820 - MLT1C LTR MaLR 0 467 1 2222 87 3 7 chr17 14348779 14349095 -75155458 + AluSp SINE Alu 1 315 0 620 308 44 24 chr17 14349120 14349370 -75155183 - MIR SINE MIR 0 262 8 1258 225 25 74 chr17 14349933 14350257 -75154296 + AluJb SINE Alu 1 308 -4 1239 201 146 17 chr17 14350709 14350997 -75153556 + MLT1A2 LTR MaLR 3 327 -47 676 316 110 51 chr17 14351015 14351941 -75152612 - L1M4 LINE L1 -1451 4695 3715 263 275 12 12 chr17 14352716 14352796 -75151757 - MER116 DNA Mariner 0 80 1 543 278 96 13 chr17 14353416 14353741 -75150812 + L1MC4a LINE L1 5563 5778 -343 710 83 0 0 chr17 14353834 14353947 -75150606 - AluSp/q SINE Alu 0 313 201 304 353 38 50 chr17 14354257 14354495 -75150058 - L1M4 LINE L1 -2967 3179 2945 387 286 29 14 chr17 14354496 14354636 -75149917 - MIR SINE MIR -5 257 116 942 305 59 53 chr17 14354639 14355144 -75149409 + MLT1K LTR MaLR 71 578 -10 256 238 0 16 chr17 14355255 14355318 -75149235 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 1243 296 65 100 chr17 14355415 14355952 -75148601 - L2 LINE L2 -566 2748 2193 2017 161 0 0 chr17 14355952 14356256 -75148297 - AluSx SINE Alu -8 304 1 1243 296 65 100 chr17 14356256 14356396 -75148157 - L2 LINE L2 -1121 2193 2050 1211 178 73 128 chr17 14356396 14356638 -75147915 - MLT1A1 LTR MaLR 0 365 150 1471 94 13 73 chr17 14356638 14356871 -75147682 - AluSc SINE Alu -16 293 75 1211 178 73 128 chr17 14356871 14357011 -75147542 - MLT1A1 LTR MaLR -215 150 4 1243 296 65 100 chr17 14357011 14357432 -75147121 - L2 LINE L2 -1264 2050 1688 2250 163 75 2 chr17 14357541 14357941 -75146612 - LTR47A LTR ERVL -23 429 1 279 290 173 43 chr17 14357941 14358103 -75146450 - L2 LINE L2 -1725 1589 1407 194 360 79 14 chr17 14358082 14358221 -75146332 + L2 LINE L2 833 980 -2334 * 449 307 113 65 chr17 14358270 14358628 -75145925 - L2 LINE L2 -1944 1370 990 2317 90 0 28 chr17 14358628 14358950 -75145603 + AluSq SINE Alu 1 313 0 449 307 113 65 chr17 14358950 14358988 -75145565 - L2 LINE L2 -2324 990 955 2482 84 0 0 chr17 14359127 14359436 -75145117 - AluSx SINE Alu -2 310 2 482 210 84 118 chr17 14359437 14359675 -75144878 + MER112 DNA MER1_type 29 258 -2 375 276 24 16 chr17 14359677 14359800 -75144753 - L2 LINE L2 -2511 803 680 243 150 0 0 chr17 14359836 14359876 -75144677 - MER3 DNA MER1_type -14 195 156 1526 215 109 36 chr17 14359885 14360415 -75144138 - L1ME1 LINE L1 -4 6162 5594 557 239 182 0 chr17 14360916 14361075 -75143478 - MER5A DNA MER1_type -1 188 1 232 274 137 29 chr17 14361100 14361202 -75143351 + MIR SINE MIR 47 159 -103 2466 86 0 0 chr17 14361210 14361512 -75143041 + AluSc SINE Alu 1 302 -7 342 115 0 0 chr17 14361512 14361564 -75142989 + (TA)n Simple_repeat Simple_repeat 2 53 0 2029 125 7 33 chr17 14362220 14362525 -75142028 + AluSx SINE Alu 1 297 -15 201 74 0 0 chr17 14362607 14362634 -75141919 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2310 89 0 10 chr17 14362712 14363015 -75141538 + AluSg SINE Alu 1 300 -10 1981 161 49 122 chr17 14363134 14363523 -75141030 + LTR32 LTR ERVL 15 362 -109 2811 63 0 0 chr17 14363523 14363857 -75140696 + L1PA5 LINE L1 5818 6151 -3 1981 161 49 122 chr17 14363857 14363957 -75140596 + LTR32 LTR ERVL 362 468 -3 275 320 79 28 chr17 14364026 14364204 -75140349 - MIR SINE MIR -14 248 62 288 252 61 87 chr17 14364975 14365054 -75139499 - MIR SINE MIR -55 207 130 2337 95 7 0 chr17 14365054 14365350 -75139203 + AluSc SINE Alu 1 298 -11 288 252 61 87 chr17 14365350 14365385 -75139168 - MIR SINE MIR -132 130 96 1921 90 83 21 chr17 14365917 14366207 -75138346 - AluSc SINE Alu 0 309 2 2395 77 0 0 chr17 14366487 14366784 -75137769 - AluY SINE Alu -14 297 1 2148 123 3 0 chr17 14367531 14367831 -75136722 + AluSp SINE Alu 1 301 -12 2009 121 7 4 chr17 14368177 14368458 -75136095 + AluSc SINE Alu 1 282 -27 414 0 0 0 chr17 14368458 14368504 -75136049 + (CA)n Simple_repeat Simple_repeat 2 47 0 358 256 37 26 chr17 14368573 14368743 -75135810 + HAL1b LINE L1 343 1597 -864 204 214 14 29 chr17 14368781 14368842 -75135711 + (TA)n Simple_repeat Simple_repeat 2 63 -7 2585 169 58 9 chr17 14368842 14369287 -75135266 - LTR24 LTR ERV1 0 467 1 204 214 14 29 chr17 14369287 14369295 -75135258 + (TA)n Simple_repeat Simple_repeat 63 70 0 32 0 0 0 chr17 14369368 14369400 -75135153 + AT_rich Low_complexity Low_complexity 1 32 0 228 163 0 0 chr17 14369630 14369673 -75134880 + A-rich Low_complexity Low_complexity 1 43 0 2593 173 86 49 chr17 14369724 14370314 -75134239 - LTR9 LTR ERV1 0 612 1 2169 109 26 0 chr17 14370531 14370833 -75133720 + AluSp SINE Alu 3 312 -1 22 35 0 0 chr17 14370936 14370965 -75133588 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr17 14371344 14371386 -75133167 + AT_rich Low_complexity Low_complexity 1 42 0 752 258 26 82 chr17 14371644 14371847 -75132706 + MIR SINE MIR 10 196 -66 4422 129 9 5 chr17 14371847 14372477 -75132076 + MER41B LTR ERV1 3 635 0 752 258 26 82 chr17 14372477 14372541 -75132012 + MIR SINE MIR 196 262 0 21 36 0 0 chr17 14373055 14373083 -75131470 + AT_rich Low_complexity Low_complexity 1 28 0 1822 198 101 60 chr17 14373316 14373983 -75130570 + LTR48 LTR ERV1 3 644 0 246 32 0 0 chr17 14374367 14374398 -75130155 + (TG)n Simple_repeat Simple_repeat 2 32 0 339 207 37 24 chr17 14375042 14375124 -75129429 + MER5A DNA MER1_type 86 168 -21 762 183 39 0 chr17 14376739 14376892 -75127661 + MER5A DNA MER1_type 3 161 -28 613 208 57 0 chr17 14377016 14377122 -75127431 + MER81 DNA DNA 3 114 0 1783 90 113 19 chr17 14377360 14377644 -75126909 + AluSc SINE Alu 1 308 0 552 299 116 9 chr17 14378306 14378530 -75126023 + MIR SINE MIR 5 252 -10 219 334 32 60 chr17 14379392 14379547 -75125006 - MIR SINE MIR -79 183 35 275 231 0 0 chr17 14379763 14379815 -75124738 - MIR SINE MIR 0 262 211 969 164 7 0 chr17 14379830 14379982 -75124571 + FRAM SINE Alu 2 154 -22 259 224 121 5 chr17 14380021 14380123 -75124430 - MIR SINE MIR -47 161 52 1394 218 44 44 chr17 14381633 14381902 -75122651 - MLT1B LTR MaLR 0 390 119 1919 171 0 0 chr17 14381902 14382200 -75122353 - AluJb SINE Alu -12 300 3 1394 218 44 44 chr17 14382200 14382320 -75122233 - MLT1B LTR MaLR -270 120 1 192 315 22 0 chr17 14383188 14383277 -75121276 + MIR SINE MIR 30 120 -88 287 337 21 11 chr17 14383435 14383530 -75121023 - L2 LINE L2 -30 3242 3147 2095 258 62 33 chr17 14383672 14384682 -75119871 + L1ME3 LINE L1 5036 6083 -79 1246 117 36 109 chr17 14384682 14384751 -75119802 + MER30 DNA MER1_type 1 73 -157 1820 122 0 43 chr17 14384751 14385029 -75119524 + AluSg SINE Alu 31 296 -14 1246 117 36 109 chr17 14385029 14385207 -75119346 + MER30 DNA MER1_type 73 230 0 2095 258 62 33 chr17 14385207 14385259 -75119294 + L1ME3 LINE L1 6083 6132 -30 2459 66 0 3 chr17 14385364 14385666 -75118887 + AluY SINE Alu 4 304 -7 1719 178 57 9 chr17 14385781 14386113 -75118440 - MER7A DNA MER2_type 0 346 1 228 191 0 21 chr17 14386151 14386198 -75118355 + CT-rich Low_complexity Low_complexity 2 47 0 225 250 0 0 chr17 14386198 14386242 -75118311 - MER5B DNA MER1_type -134 44 1 634 311 56 15 chr17 14386476 14386743 -75117810 + MLT1F LTR MaLR 36 313 -229 22 56 0 0 chr17 14387187 14387223 -75117330 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr17 14387317 14387346 -75117207 + AT_rich Low_complexity Low_complexity 1 29 0 2518 149 49 8 chr17 14388058 14388528 -75116025 - L1MB3 LINE L1 -16 6167 5679 2558 133 26 14 chr17 14388734 14389155 -75115398 + MSTB LTR MaLR 1 426 0 237 250 22 11 chr17 14389731 14389823 -75114730 + (TATATG)n Simple_repeat Simple_repeat 4 96 0 1073 247 84 77 chr17 14389926 14390380 -75114173 - L2 LINE L2 -32 3281 2825 335 104 0 0 chr17 14390481 14390529 -75114024 + MER74B LTR ERVL 1 48 -574 263 316 5 31 chr17 14391306 14391502 -75113051 + L1ME4a LINE L1 5830 6020 -101 * 2033 236 57 35 chr17 14391491 14391772 -75112781 + L1ME LINE L1 272 545 -5525 2337 78 3 16 chr17 14391772 14392081 -75112472 + AluY SINE Alu 3 307 -4 2033 236 57 35 chr17 14392081 14392540 -75112013 + L1ME LINE L1 545 1028 -5042 2239 107 0 0 chr17 14392599 14392899 -75111654 + AluSg SINE Alu 1 300 -10 302 179 164 8 chr17 14393096 14393230 -75111323 - L1ME LINE L1 -375 5746 5592 235 218 26 26 chr17 14393218 14393296 -75111257 - L1ME3A LINE L1 0 6170 6093 * 270 319 22 0 chr17 14393326 14393461 -75111092 - L1M4 LINE L1 -1481 4665 4528 412 180 16 0 chr17 14393461 14393583 -75110970 + (TA)n Simple_repeat Simple_repeat 2 125 0 1921 264 96 29 chr17 14393648 14394983 -75109570 - L1ME2 LINE L1 -3 6161 4744 738 192 14 70 chr17 14395148 14395362 -75109191 - L1MA9 LINE L1 -30 6282 6081 257 336 47 19 chr17 14395395 14395502 -75109051 + L2 LINE L2 3199 3308 -5 26 0 0 0 chr17 14395800 14395826 -75108727 + AT_rich Low_complexity Low_complexity 1 26 0 304 308 105 21 chr17 14395896 14396039 -75108514 + MIR3 SINE MIR 5 159 -49 235 300 15 15 chr17 14396855 14396948 -75107605 + (TA)n Simple_repeat Simple_repeat 1 96 -34 8988 102 16 12 chr17 14396948 14397297 -75107256 + HSMAR1 DNA Mariner 3 349 -938 2295 74 0 20 chr17 14397297 14397596 -75106957 + AluY SINE Alu 1 293 -18 8988 102 16 12 chr17 14397596 14398527 -75106026 + HSMAR1 DNA Mariner 349 1287 0 235 300 15 15 chr17 14398527 14398563 -75105990 + (TA)n Simple_repeat Simple_repeat 95 130 0 22 56 0 0 chr17 14398992 14399028 -75105525 + AT_rich Low_complexity Low_complexity 1 36 0 1703 146 60 27 chr17 14399114 14399483 -75105070 - SVA Other Other -573 813 433 27 0 0 0 chr17 14399559 14399586 -75104967 + AT_rich Low_complexity Low_complexity 1 27 0 279 0 0 0 chr17 14399609 14399640 -75104913 + (GA)n Simple_repeat Simple_repeat 2 32 0 2093 112 0 0 chr17 14399641 14399918 -75104635 - AluSx SINE Alu -35 277 1 12694 192 50 46 chr17 14400199 14403090 -75101463 + L1M2 LINE L1 1 2902 -3947 4781 186 18 24 chr17 14403088 14404198 -75100355 + L1M2 LINE L1 3775 4877 -1971 * 13173 217 32 56 chr17 14404227 14406586 -75097967 + L1P5 LINE L1 3 2418 -4449 653 147 0 0 chr17 14406586 14406681 -75097872 - AluSp/q SINE Alu -31 282 188 13173 217 32 56 chr17 14406681 14407373 -75097180 + L1P5 LINE L1 2418 3125 -3742 1811 128 23 56 chr17 14407373 14407679 -75096874 - AluSq SINE Alu 0 313 18 13173 217 32 56 chr17 14407679 14407744 -75096809 + L1P5 LINE L1 3125 3190 -3677 1306 73 12 0 chr17 14407744 14407908 -75096645 + AluY SINE Alu 130 295 -16 13173 217 32 56 chr17 14407908 14409516 -75095037 + L1P5 LINE L1 3190 4646 -2221 731 179 0 0 chr17 14409516 14409633 -75094920 + FLAM_C SINE Alu 1 117 -16 13173 217 32 56 chr17 14409633 14411190 -75093363 + L1P5 LINE L1 4646 6240 -627 483 278 42 21 chr17 14411794 14411938 -75092615 + MIR3 SINE MIR 58 204 -4 183 200 0 0 chr17 14412075 14412110 -75092443 - MIR SINE MIR -2 260 226 2468 32 0 3 chr17 14413204 14413488 -75091065 - AluY SINE Alu 0 311 29 231 0 50 25 chr17 14413658 14413698 -75090855 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1409 213 26 3 chr17 14414454 14414764 -75089789 - L1ME2 LINE L1 -8 6550 6234 2225 253 96 53 chr17 14414772 14416031 -75088522 - L1ME2 LINE L1 -1062 5478 4166 22 35 0 0 chr17 14416321 14416350 -75088203 + AT_rich Low_complexity Low_complexity 1 29 0 873 288 81 28 chr17 14416350 14416771 -75087782 - L1ME2 LINE L1 -4549 1991 1627 2197 279 93 29 chr17 14416785 14417106 -75087447 - L1MEc LINE L1 -2365 3850 3551 306 0 0 0 chr17 14417106 14417140 -75087413 + (TG)n Simple_repeat Simple_repeat 1 34 0 2197 279 93 29 chr17 14417140 14418546 -75086007 - L1MEc LINE L1 -2664 3551 1958 1368 225 15 0 chr17 14418556 14418827 -75085726 + AluJo SINE Alu 21 295 -17 6231 191 59 50 chr17 14418945 14419986 -75084567 - L1MC3 LINE L1 -8 8057 7027 2106 153 0 6 chr17 14419986 14420300 -75084253 + AluSx SINE Alu 1 312 0 6231 191 59 50 chr17 14420300 14420629 -75083924 - L1MC3 LINE L1 -1038 7027 6669 2336 154 50 21 chr17 14420629 14421051 -75083502 + Tigger2a DNA MER2_type 1 434 0 6231 191 59 50 chr17 14421051 14421228 -75083325 - L1MC3 LINE L1 -1396 6669 6495 1819 158 40 3 chr17 14421229 14421526 -75083027 - AluJb SINE Alu -4 308 1 361 237 18 9 chr17 14421601 14421715 -75082838 - L1P LINE L1 -1045 5101 4987 * 1144 235 131 70 chr17 14421707 14422119 -75082434 - L1P3 LINE L1 -6015 446 10 3741 222 46 39 chr17 14422134 14422246 -75082307 - L1MC3 LINE L1 -743 5683 5573 7073 46 14 1 chr17 14422246 14423661 -75080892 + L1PA7 LINE L1 4719 6146 -8 3741 222 46 39 chr17 14423661 14425450 -75079103 - L1MC3 LINE L1 -853 5573 4593 1302 244 152 18 chr17 14425451 14425845 -75078708 - MER82 DNA MER2_type -1 652 206 1004 215 5 0 chr17 14426157 14426357 -75078196 - MER82 DNA MER2_type -451 202 2 5305 251 62 40 chr17 14426372 14428482 -75076071 - L1MC3 LINE L1 -1846 4580 2519 2430 78 3 3 chr17 14428482 14428790 -75075763 - AluY SINE Alu -3 308 1 5305 251 62 40 chr17 14428790 14428940 -75075613 - L1MC3 LINE L1 -3907 2519 2374 609 133 0 0 chr17 14428940 14429045 -75075508 - L1MA9 LINE L1 -1 6311 6207 5305 251 62 40 chr17 14429045 14429198 -75075355 - L1MC3 LINE L1 -4052 2374 2062 1763 213 50 2 chr17 14429207 14429644 -75074909 + L1 LINE L1 4327 4784 -1362 15096 136 108 7 chr17 14429644 14432915 -75071638 - L1PBa LINE L1 -3261 3601 5 222 235 86 25 chr17 14433868 14433949 -75070604 + MIR SINE MIR 123 208 -54 253 291 126 31 chr17 14434444 14434571 -75069982 - MIR SINE MIR -18 244 106 223 341 33 11 chr17 14434604 14434695 -75069858 - MIR SINE MIR -148 114 22 233 369 0 0 chr17 14434979 14435063 -75069490 + MIR3 SINE MIR 90 173 -35 1013 109 32 4 chr17 14435981 14436228 -75068325 + GA-rich Low_complexity Low_complexity 1 254 0 423 0 0 0 chr17 14436364 14436411 -75068142 + (TG)n Simple_repeat Simple_repeat 1 47 0 646 186 68 114 chr17 14436613 14436833 -75067720 + MER58C DNA MER1_type 6 215 0 238 309 24 63 chr17 14436938 14437064 -75067489 - L2 LINE L2 -226 3046 2926 2523 200 77 35 chr17 14438161 14438690 -75065863 - L1MB5 LINE L1 -6 6168 5610 1925 161 0 0 chr17 14438690 14438981 -75065572 - AluSx SINE Alu -17 295 5 2523 200 77 35 chr17 14438981 14439051 -75065502 - L1MB5 LINE L1 -564 5610 5544 2372 155 26 81 chr17 14439343 14439616 -75064937 - Tigger2a DNA MER2_type -2274 434 195 2301 113 0 0 chr17 14439616 14439925 -75064628 + AluY SINE Alu 1 309 -2 2372 155 26 81 chr17 14439925 14440110 -75064443 - Tigger2a DNA MER2_type -2513 195 1 552 200 32 32 chr17 14441170 14441295 -75063258 + Tigger2 DNA MER2_type 2556 2680 -38 465 350 48 21 chr17 14442085 14442271 -75062282 - MIR SINE MIR -57 205 15 740 292 116 58 chr17 14442646 14443052 -75061501 - MLT1J LTR MaLR 0 511 71 2587 47 0 0 chr17 14443052 14443350 -75061203 - AluY SINE Alu -13 298 1 740 292 116 58 chr17 14443350 14443426 -75061127 - MLT1J LTR MaLR -440 71 1 301 217 42 8 chr17 14443644 14443764 -75060789 + (TA)n Simple_repeat Simple_repeat 1 124 0 413 211 37 111 chr17 14443764 14443840 -75060713 - L1ME3A LINE L1 -4 6166 6086 2007 169 22 30 chr17 14443840 14444206 -75060347 + MLT1A1 LTR MaLR 1 363 -2 413 211 37 111 chr17 14444206 14444319 -75060234 - L1ME3A LINE L1 -84 6086 5988 254 325 13 13 chr17 14444385 14444462 -75060091 + MIR SINE MIR 38 114 -94 222 171 0 0 chr17 14444512 14444553 -75060000 + (TG)n Simple_repeat Simple_repeat 2 42 0 229 360 0 16 chr17 14445170 14445295 -75059258 + GA-rich Low_complexity Low_complexity 5 127 0 1952 145 7 0 chr17 14445997 14446286 -75058267 + AluJb SINE Alu 1 291 -21 191 350 52 10 chr17 14446286 14446383 -75058170 - L3 LINE CR1 -29 1548 1448 1699 167 7 11 chr17 14446504 14446791 -75057762 + AluJo SINE Alu 5 290 -22 1748 254 5 10 chr17 14447031 14447444 -75057109 - L1ME3A LINE L1 -174 5992 5582 2215 97 3 3 chr17 14447447 14447735 -75056818 + AluSc SINE Alu 1 288 -21 333 162 37 7 chr17 14447735 14447871 -75056682 + (TA)n Simple_repeat Simple_repeat 1 140 0 230 0 0 0 chr17 14447872 14447900 -75056653 - Alu SINE Alu -173 130 103 486 102 72 0 chr17 14447906 14448073 -75056480 + (TA)n Simple_repeat Simple_repeat 2 180 0 475 88 88 3 chr17 14448087 14448397 -75056156 + (TA)n Simple_repeat Simple_repeat 1 336 0 243 156 0 44 chr17 14448397 14448442 -75056111 - L1ME3A LINE L1 -567 5595 5553 192 77 0 0 chr17 14449045 14449071 -75055482 + (CAA)n Simple_repeat Simple_repeat 2 27 0 429 385 27 11 chr17 14449097 14449284 -75055269 - MIR SINE MIR -34 228 39 304 289 96 24 chr17 14449640 14449806 -75054747 - MLT1H LTR MaLR -258 291 114 3721 195 59 29 chr17 14449842 14450411 -75054142 + L1MB5 LINE L1 4761 5312 -862 2352 50 40 20 chr17 14450411 14450711 -75053842 + AluY SINE Alu 1 306 -5 3721 195 59 29 chr17 14450711 14451501 -75053052 + L1MB5 LINE L1 5312 6174 0 254 276 66 0 chr17 14451505 14451581 -75052972 - MLT1H LTR MaLR -461 88 8 270 240 125 48 chr17 14451788 14451892 -75052661 + MIR3 SINE MIR 97 208 0 455 133 0 0 chr17 14452451 14452511 -75052042 + AluSx SINE Alu 1 60 -250 2788 10 0 3 chr17 14452511 14452817 -75051736 - AluYa5 SINE Alu -6 305 1 1661 128 4 0 chr17 14452817 14453050 -75051503 + AluSx SINE Alu 53 287 -25 387 275 12 44 chr17 14453204 14453364 -75051189 - MIR SINE MIR -45 217 63 231 373 124 0 chr17 14453452 14453693 -75050860 + L2 LINE L2 2584 2854 -460 431 349 81 51 chr17 14453775 14454110 -75050443 + L2 LINE L2 2927 3271 -1 2245 99 0 3 chr17 14456853 14457157 -75047396 + AluY SINE Alu 1 303 -8 25 0 0 0 chr17 14457283 14457308 -75047245 + AT_rich Low_complexity Low_complexity 1 25 0 224 29 0 29 chr17 14457308 14457342 -75047211 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1972 116 11 0 chr17 14457344 14457621 -75046932 - AluSx SINE Alu -32 280 1 21 71 0 0 chr17 14457994 14458036 -75046517 + AT_rich Low_complexity Low_complexity 1 42 0 577 256 56 104 chr17 14458176 14458570 -75045983 - L2 LINE L2 0 3313 2939 2187 130 3 0 chr17 14458892 14459199 -75045354 + AluSx SINE Alu 1 308 -4 1312 210 80 72 chr17 14459283 14459406 -75045147 - MER66A LTR ERV1 0 478 358 4448 129 11 2 chr17 14459406 14460034 -75044519 - MER41B LTR ERV1 -1 634 1 1312 210 80 72 chr17 14460034 14460387 -75044166 - MER66A LTR ERV1 -120 358 98 3424 151 35 14 chr17 14460660 14461237 -75043316 - L1MA8 LINE L1 -5 6286 5698 2072 130 7 10 chr17 14462619 14462927 -75041626 + AluSx SINE Alu 1 307 -5 1173 228 82 47 chr17 14463008 14463459 -75041094 + MLT1C LTR MaLR 1 467 0 680 287 169 35 chr17 14463753 14464150 -75040403 - LTR16A LTR ERVL 0 457 8 577 343 72 48 chr17 14464410 14464885 -75039668 + HAL1 LINE L1 1116 1601 -906 2713 119 6 3 chr17 14464947 14465308 -75039245 + THE1B LTR MaLR 3 364 0 9998 122 36 31 chr17 14465308 14465389 -75039164 + THE1B-int LTR MaLR 1 80 -1500 2747 88 48 119 chr17 14465389 14465867 -75038686 - MLT2A1 LTR ERVL 0 444 1 9998 122 36 31 chr17 14465867 14467356 -75037197 + THE1B-int LTR MaLR 80 1580 0 2393 161 6 11 chr17 14467356 14467722 -75036831 + THE1B LTR MaLR 1 364 0 564 250 58 24 chr17 14468712 14468920 -75035633 + LTR33 LTR ERVL 305 519 -2 257 294 97 69 chr17 14469261 14469581 -75034972 + HERV16 LTR ERVL 345 673 -4323 551 252 18 0 chr17 14469656 14469767 -75034786 - MER81 DNA DNA -1 113 1 182 125 0 50 chr17 14471860 14471900 -75032653 + (TTTTC)n Simple_repeat Simple_repeat 3 40 0 24 77 0 0 chr17 14473564 14473616 -75030937 + AT_rich Low_complexity Low_complexity 1 52 0 1935 121 0 0 chr17 14475008 14475273 -75029280 - AluSg SINE Alu -14 296 32 2463 74 0 0 chr17 14475364 14475660 -75028893 - AluY SINE Alu -15 296 1 1804 127 0 18 chr17 14476463 14476739 -75027814 + AluSx SINE Alu 42 312 0 2338 178 40 9 chr17 14476743 14477188 -75027365 - MER65C LTR ERV1 -2 459 1 278 226 65 0 chr17 14477239 14477301 -75027252 + L2 LINE L2 2926 2991 -322 759 161 115 35 chr17 14477304 14477452 -75027101 + MER53 DNA DNA 2 167 -22 1937 178 39 34 chr17 14477452 14477840 -75026713 - MLT1B LTR MaLR 0 390 1 759 161 115 35 chr17 14477840 14477865 -75026688 + MER53 DNA DNA 167 189 0 479 256 100 43 chr17 14477872 14478153 -75026400 + L2 LINE L2 2989 3285 -28 2261 134 76 8 chr17 14478153 14478549 -75026004 + MSTA LTR MaLR 6 428 0 293 302 16 24 chr17 14478750 14478880 -75025673 - MER5A DNA MER1_type -34 155 16 264 136 0 0 chr17 14480275 14480319 -75024234 + L2 LINE L2 3269 3312 -1 644 238 119 75 chr17 14481294 14481655 -75022898 - MLT1H LTR MaLR 0 549 173 * 1511 218 105 48 chr17 14481632 14482124 -75022429 + MER39 LTR ERV1 6 682 0 673 267 11 0 chr17 14482131 14482311 -75022242 - MLT1H LTR MaLR -366 183 2 305 224 153 10 chr17 14482520 14482618 -75021935 - L2 LINE L2 -6 3266 3155 219 305 58 58 chr17 14482728 14482902 -75021651 + L2 LINE L2 2878 3051 -221 271 245 29 44 chr17 14482999 14483183 -75021370 + LTR48B LTR ERV1 36 258 -386 293 238 114 48 chr17 14483258 14483468 -75021085 + LTR48 LTR ERV1 514 737 -50 200 322 22 11 chr17 14483557 14483647 -75020906 + L2 LINE L2 3174 3264 -8 783 206 138 5 chr17 14483780 14483969 -75020584 + MER58A DNA MER1_type 1 214 -10 255 329 27 0 chr17 14484511 14484584 -75019969 - L2 LINE L2 -5 3267 3193 2334 77 0 46 chr17 14484850 14485174 -75019379 + AluSc SINE Alu 1 309 0 451 286 75 53 chr17 14485357 14485675 -75018878 - Charlie8 DNA MER1_type -2008 409 85 1817 94 0 12 chr17 14485759 14486004 -75018549 + AluSg/x SINE Alu 69 310 -2 22 0 0 0 chr17 14486514 14486536 -75018017 + AT_rich Low_complexity Low_complexity 1 22 0 240 111 0 0 chr17 14486669 14486705 -75017848 + (T)n Simple_repeat Simple_repeat 1 36 0 238 284 66 25 chr17 14487682 14487879 -75016674 + L1MC5 LINE L1 7587 7791 -170 745 208 122 28 chr17 14487900 14488188 -75016365 - MER39 LTR ERV1 0 707 393 211 256 0 0 chr17 14488327 14488366 -75016187 + polypyrimidine Low_complexity Low_complexity 4 42 0 2026 141 16 0 chr17 14488368 14488673 -75015880 - AluSx SINE Alu 0 312 3 813 157 7 59 chr17 14488701 14488854 -75015699 + AluJb SINE Alu 35 179 -133 219 231 31 31 chr17 14488877 14488942 -75015611 + MIR SINE MIR 79 143 -65 239 235 31 71 chr17 14489591 14489689 -75014864 - L3 LINE CR1 -261 1316 1223 383 213 63 63 chr17 14490200 14490312 -75014241 - MER5B DNA MER1_type -1 177 63 1930 116 6 77 chr17 14490312 14490466 -75014087 - AluSx SINE Alu -7 305 185 690 65 0 0 chr17 14490466 14490558 -75013995 + (TTTTA)n Simple_repeat Simple_repeat 4 95 0 1930 116 6 77 chr17 14490558 14490730 -75013823 - AluSx SINE Alu -127 185 2 383 213 63 63 chr17 14490730 14490744 -75013809 - MER5B DNA MER1_type -114 64 51 189 268 122 12 chr17 14490779 14490861 -75013692 + MIR3 SINE MIR 82 172 -36 411 232 249 28 chr17 14490869 14491046 -75013507 + MIR SINE MIR 8 223 -39 26 30 0 0 chr17 14491338 14491371 -75013182 + AT_rich Low_complexity Low_complexity 1 33 0 479 294 56 11 chr17 14491838 14492018 -75012535 - MIR3 SINE MIR -3 205 18 708 189 31 0 chr17 14492137 14492264 -75012289 - MER5A DNA MER1_type -3 186 56 211 150 0 25 chr17 14492329 14492369 -75012184 + (TTA)n Simple_repeat Simple_repeat 2 40 0 230 346 142 0 chr17 14494684 14494811 -75009742 - MIR3 SINE MIR -3 205 61 2498 77 0 0 chr17 14495659 14495970 -75008583 - AluY SINE Alu 0 311 1 2784 163 125 37 chr17 14496195 14496639 -75007914 - MER39 LTR ERV1 0 707 187 2348 107 0 3 chr17 14496639 14496948 -75007605 - AluSg SINE Alu 0 310 3 2784 163 125 37 chr17 14496948 14497152 -75007401 - MER39 LTR ERV1 -520 187 2 338 304 174 0 chr17 14497264 14497402 -75007151 + MER5A DNA MER1_type 28 189 0 525 252 15 28 chr17 14497411 14497558 -75006995 - MER5B DNA MER1_type -1 177 49 255 350 30 26 chr17 14497573 14497746 -75006807 + MER5A DNA MER1_type 1 189 0 759 319 133 24 chr17 14497969 14498028 -75006525 - L2 LINE L2 0 3313 3262 2134 156 71 22 chr17 14498028 14498439 -75006114 - Tigger2a DNA MER2_type 0 434 4 759 319 133 24 chr17 14498439 14499043 -75005510 - L2 LINE L2 -51 3262 2578 1566 126 0 34 chr17 14500962 14501231 -75003322 + L1PB4 LINE L1 5873 6132 -24 207 87 0 65 chr17 14501251 14501297 -75003256 + (TTAAA)n Simple_repeat Simple_repeat 1 43 0 368 227 18 18 chr17 14501304 14501414 -75003139 - L1ME LINE L1 -501 5620 5511 354 336 67 44 chr17 14501525 14501844 -75002709 + L2 LINE L2 2860 3170 -143 2473 105 21 16 chr17 14501844 14502217 -75002336 - THE1C LTR MaLR 0 375 1 8194 151 36 32 chr17 14502217 14503790 -75000763 - THE1C-int LTR MaLR 0 1580 1 2300 103 10 68 chr17 14503790 14504020 -75000533 - THE1C LTR MaLR 0 375 176 2013 78 4 4 chr17 14504020 14504276 -75000277 + AluY SINE Alu 55 310 -1 2300 103 10 68 chr17 14504276 14504443 -75000110 - THE1C LTR MaLR -199 176 1 354 336 67 44 chr17 14504443 14504526 -75000027 + L2 LINE L2 3169 3273 -40 979 298 23 33 chr17 14505124 14505513 -74999040 - LTR16C LTR ERVL -10 481 97 265 231 98 92 chr17 14505889 14506062 -74998491 + MLT1H LTR MaLR 376 549 0 339 229 38 38 chr17 14506609 14506714 -74997839 + L1M4 LINE L1 3951 4055 -2091 651 177 65 0 chr17 14507110 14507234 -74997319 + AluSp/q SINE Alu 173 304 -9 194 320 97 29 chr17 14507262 14507365 -74997188 - L2 LINE L2 0 3313 3204 184 239 0 22 chr17 14508135 14508181 -74996372 - L2 LINE L2 -3 3310 3266 252 351 58 39 chr17 14508500 14508654 -74995899 + MIR SINE MIR 20 176 -86 287 298 62 56 chr17 14508654 14508832 -74995721 - MIR SINE MIR -11 251 73 358 276 0 75 chr17 14508858 14508992 -74995561 - MIR SINE MIR -84 124 1 336 24 0 0 chr17 14509457 14509498 -74995055 + (CA)n Simple_repeat Simple_repeat 2 42 0 182 36 0 36 chr17 14510945 14510973 -74993580 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 207 0 0 0 chr17 14511212 14511235 -74993318 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 684 287 141 17 chr17 14512275 14512630 -74991923 + MLT1J LTR MaLR 69 467 -44 552 232 72 0 chr17 14512936 14513061 -74991492 - MIR SINE MIR -25 237 104 239 197 13 40 chr17 14513299 14513375 -74991178 + A-rich Low_complexity Low_complexity 2 75 0 1013 194 148 26 chr17 14513396 14513700 -74990853 - MER2 DNA MER2_type -1 343 3 2435 127 5 19 chr17 14513861 14514230 -74990323 - THE1B LTR MaLR 0 364 1 865 143 0 36 chr17 14514637 14514777 -74989776 - AluJo SINE Alu -177 135 1 282 289 58 58 chr17 14514837 14515062 -74989491 + L1ME LINE L1 5475 5699 -422 1716 106 0 21 chr17 14515063 14515298 -74989255 + AluSg/x SINE Alu 69 298 -14 527 224 23 0 chr17 14515298 14515472 -74989081 + (TA)n Simple_repeat Simple_repeat 1 178 0 472 229 17 11 chr17 14515485 14515829 -74988724 + (TA)n Simple_repeat Simple_repeat 1 345 0 523 214 6 22 chr17 14515848 14516030 -74988523 + (TA)n Simple_repeat Simple_repeat 2 180 0 619 190 17 11 chr17 14516048 14516227 -74988326 + (TA)n Simple_repeat Simple_repeat 1 180 0 320 118 26 92 chr17 14516231 14516307 -74988246 + L1MC4 LINE L1 1995 2065 -4361 308 115 26 115 chr17 14516334 14516412 -74988141 + L1MC4 LINE L1 1995 2065 -4361 308 115 26 115 chr17 14516439 14516517 -74988036 + L1MC4 LINE L1 1995 2065 -4361 308 115 26 115 chr17 14516544 14516622 -74987931 + L1MC4 LINE L1 1995 2065 -4361 308 115 26 115 chr17 14516649 14516727 -74987826 + L1MC4 LINE L1 1995 2065 -4361 308 150 16 102 chr17 14516754 14516881 -74987672 + L1MC4 LINE L1 1995 6983 -1339 * 319 272 0 22 chr17 14516857 14516949 -74987604 - L1MC4 LINE L1 -1339 6703 6614 193 146 42 0 chr17 14516954 14517002 -74987551 + (TA)n Simple_repeat Simple_repeat 2 51 0 277 311 139 7 chr17 14517579 14517730 -74986823 - MIR3 SINE MIR -7 201 31 368 353 87 71 chr17 14519913 14520602 -74983951 - L2 LINE L2 -76 3196 2490 412 253 235 12 chr17 14520764 14520930 -74983623 + MIR SINE MIR 57 259 -3 21 0 0 0 chr17 14521657 14521678 -74982875 + AT_rich Low_complexity Low_complexity 1 21 0 183 238 0 24 chr17 14521680 14521722 -74982831 + MIR3 SINE MIR 144 184 -24 270 56 0 0 chr17 14521882 14521918 -74982635 + (TG)n Simple_repeat Simple_repeat 1 36 0 1659 200 67 9 chr17 14522008 14522353 -74982200 + MLT1A1 LTR MaLR 1 365 0 280 286 41 67 chr17 14522480 14522868 -74981685 + L1ME4a LINE L1 3083 3460 -2686 305 271 85 65 chr17 14523152 14523625 -74980928 + L1ME4a LINE L1 3842 4323 -1823 784 299 5 5 chr17 14523688 14523902 -74980651 - MIR SINE MIR -26 236 23 280 309 83 25 chr17 14524145 14524461 -74980092 + L1ME4a LINE L1 5684 6017 -104 23 68 0 0 chr17 14524550 14524594 -74979959 + AT_rich Low_complexity Low_complexity 1 44 0 2122 112 34 0 chr17 14524799 14525093 -74979460 + AluSc SINE Alu 1 304 -5 512 296 31 23 chr17 14525617 14525874 -74978679 + MIR SINE MIR 4 262 0 1446 131 16 0 chr17 14525897 14526142 -74978411 + L1MA2 LINE L1 6056 6304 0 23 0 0 0 chr17 14526142 14526165 -74978388 + AT_rich Low_complexity Low_complexity 1 23 0 2333 100 0 10 chr17 14526174 14526484 -74978069 + AluSc SINE Alu 1 307 -2 925 232 94 3 chr17 14526646 14526943 -74977610 + MER33 DNA MER1_type 1 324 0 1119 226 5 0 chr17 14527758 14527979 -74976574 - MER58A DNA MER1_type -2 222 1 224 271 21 0 chr17 14529142 14529190 -74975363 + L2 LINE L2 3134 3182 -90 267 31 0 0 chr17 14529241 14529273 -74975280 + (CA)n Simple_repeat Simple_repeat 1 32 0 291 284 35 0 chr17 14529450 14529679 -74974874 + (TA)n Simple_repeat Simple_repeat 1 237 0 471 214 29 0 chr17 14529681 14530346 -74974207 + (CATATA)n Simple_repeat Simple_repeat 1 684 0 542 158 110 8 chr17 14530947 14531074 -74973479 + MLT1B LTR MaLR 29 168 -222 201 74 0 0 chr17 14531136 14531163 -74973390 + (CA)n Simple_repeat Simple_repeat 2 28 0 2282 89 14 0 chr17 14531239 14531532 -74973021 + AluSx SINE Alu 1 297 -15 495 235 86 68 chr17 14531645 14531787 -74972766 + MLT1J2 LTR MaLR 56 194 -252 1131 211 45 45 chr17 14531787 14531920 -74972633 - MER58B DNA MER1_type -2079 341 209 2213 89 0 10 chr17 14531920 14532211 -74972342 + AluSx SINE Alu 1 288 -24 1131 211 45 45 chr17 14532211 14532414 -74972139 - MER58B DNA MER1_type -2210 210 5 495 235 86 68 chr17 14532414 14532658 -74971895 + MLT1J2 LTR MaLR 194 444 -2 186 43 0 0 chr17 14533280 14533303 -74971250 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1748 183 3 0 chr17 14533305 14533590 -74970963 - AluJo SINE Alu -26 286 1 2575 7 0 0 chr17 14534109 14534384 -74970169 - AluY SINE Alu 0 311 37 386 169 13 26 chr17 14534559 14534636 -74969917 + MER116 DNA Mariner 4 79 -1 347 238 89 20 chr17 14534771 14534915 -74969638 + MIR SINE MIR 39 151 -57 2626 148 25 9 chr17 14535202 14535640 -74968913 - Tigger2 DNA MER2_type -1 2717 2273 270 140 228 18 chr17 14535630 14535687 -74968866 - Tigger2 DNA MER2_type -2649 69 1 * 2373 97 0 3 chr17 14537385 14537696 -74966857 - AluSg SINE Alu 0 310 1 2209 69 0 41 chr17 14537866 14538156 -74966397 - AluY SINE Alu -6 305 28 247 230 240 20 chr17 14538156 14538256 -74966297 + MIR SINE MIR 41 162 -100 735 191 109 0 chr17 14538352 14538499 -74966054 - MER5A DNA MER1_type -25 164 2 644 118 0 9 chr17 14538568 14538678 -74965875 + (GGAA)n Simple_repeat Simple_repeat 3 111 0 493 301 14 14 chr17 14539166 14539312 -74965241 + MIR SINE MIR 24 169 -93 2060 132 3 20 chr17 14539651 14539954 -74964599 - AluSx SINE Alu -13 299 2 588 296 78 50 chr17 14540318 14540716 -74963837 - MARNA DNA Mariner -29 557 149 246 322 222 0 chr17 14540764 14540935 -74963618 - MIR SINE MIR -19 243 35 816 203 70 0 chr17 14541309 14541467 -74963086 + MER82 DNA MER2_type 1 169 -484 1477 169 0 24 chr17 14541485 14541615 -74962938 + Tigger2a DNA MER2_type 2 134 -2574 2062 95 40 0 chr17 14541615 14541911 -74962642 - AluSp SINE Alu -5 308 1 1477 169 0 24 chr17 14541911 14542147 -74962406 + Tigger2a DNA MER2_type 134 434 0 1253 164 99 34 chr17 14542147 14542256 -74962297 + MER82 DNA MER2_type 199 299 -354 2563 47 3 0 chr17 14542256 14542557 -74961996 + AluY SINE Alu 3 304 -7 1253 164 99 34 chr17 14542557 14542616 -74961937 + MER82 DNA MER2_type 299 353 -300 1981 143 48 38 chr17 14542616 14542987 -74961566 + THE1C LTR MaLR 1 375 0 1253 164 99 34 chr17 14542987 14543078 -74961475 + MER82 DNA MER2_type 353 476 -177 183 80 0 0 chr17 14543841 14543866 -74960687 + (CA)n Simple_repeat Simple_repeat 2 26 0 316 293 100 41 chr17 14544005 14544715 -74959838 + L1MC/D LINE L1 2386 3137 -3009 23 86 0 0 chr17 14544727 14544785 -74959768 + AT_rich Low_complexity Low_complexity 1 58 0 1247 77 0 0 chr17 14544795 14544951 -74959602 - AluY SINE Alu -4 307 152 975 289 82 13 chr17 14545118 14545581 -74958972 + L1MC/D LINE L1 5264 5758 -2050 2429 65 0 0 chr17 14545636 14545928 -74958625 - AluSx SINE Alu -17 295 4 255 305 34 51 chr17 14546814 14546932 -74957621 + MIR SINE MIR 3 118 -144 2099 150 40 29 chr17 14547025 14547405 -74957148 + L1MA7 LINE L1 5902 6285 -6 2116 113 3 10 chr17 14547495 14547795 -74956758 + AluSx SINE Alu 1 298 -14 2413 78 0 7 chr17 14548356 14548664 -74955889 - AluY SINE Alu -5 306 1 2467 84 0 13 chr17 14549110 14549421 -74955132 + AluY SINE Alu 1 307 -4 1240 213 65 76 chr17 14549475 14549496 -74955057 - MLT2C2 LTR ERVL -9 455 435 180 0 0 0 chr17 14549496 14549516 -74955037 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1240 213 65 76 chr17 14549516 14549954 -74954599 - MLT2C2 LTR ERVL -29 435 1 267 221 12 58 chr17 14550533 14550614 -74953939 - L2 LINE L2 -1061 2253 2177 310 376 67 18 chr17 14550614 14550779 -74953774 - MER5B DNA MER1_type 0 178 6 588 299 197 13 chr17 14550872 14551263 -74953290 - L2 LINE L2 -1292 2022 1560 2241 118 0 3 chr17 14551279 14551585 -74952968 + AluSg SINE Alu 1 305 -5 2398 72 0 3 chr17 14551749 14552040 -74952513 + AluSg1 SINE Alu 1 290 -19 2529 240 20 30 chr17 14552215 14552774 -74951779 - MLT2B3 LTR ERVL 0 554 2 22 88 0 0 chr17 14552895 14552952 -74951601 + AT_rich Low_complexity Low_complexity 1 57 0 23 0 0 0 chr17 14553000 14553023 -74951530 + AT_rich Low_complexity Low_complexity 1 23 0 315 355 149 12 chr17 14553531 14554031 -74950522 + L2 LINE L2 2688 3266 -47 1348 208 10 31 chr17 14554236 14554529 -74950024 - AluJo SINE Alu -25 287 1 1093 171 0 18 chr17 14554666 14554836 -74949717 + FAM SINE Alu 1 167 -8 2276 115 0 10 chr17 14554950 14555264 -74949289 - AluY SINE Alu 0 311 1 363 164 0 16 chr17 14556201 14556262 -74948291 + AluJ/FRAM SINE Alu 233 292 -10 194 366 183 0 chr17 14556402 14556495 -74948058 - L2 LINE L2 -2 3270 3161 744 333 50 36 chr17 14556583 14557024 -74947529 - L2 LINE L2 -4 3309 2863 1346 178 99 14 chr17 14557040 14557333 -74947220 - MLT1C LTR MaLR -5 462 145 979 353 73 24 chr17 14557342 14558002 -74946551 - L2 LINE L2 -501 2813 2122 1213 151 31 62 chr17 14558244 14558469 -74946084 - MER20 DNA MER1_type -1 218 1 239 167 198 4 chr17 14559600 14559686 -74944867 - MLT1G1 LTR MaLR 0 590 501 787 356 17 34 chr17 14559726 14560077 -74944476 - MLT1G1 LTR MaLR -175 420 76 5566 58 8 0 chr17 14560436 14561091 -74943462 - L1PA8 LINE L1 -2 6170 5511 2415 69 7 0 chr17 14562057 14562346 -74942207 - AluSc SINE Alu -17 292 2 2168 196 21 128 chr17 14562681 14563345 -74941208 + MLT1E LTR MaLR 1 593 0 2277 112 3 0 chr17 14563512 14563807 -74940746 + AluSp SINE Alu 1 296 -17 196 367 40 7 chr17 14564052 14564202 -74940351 - MIR3 SINE MIR 0 208 54 223 324 98 0 chr17 14564210 14564312 -74940241 - MIR SINE MIR -11 251 140 2168 112 0 0 chr17 14564639 14564925 -74939628 - AluSg SINE Alu -12 298 13 658 173 54 54 chr17 14565044 14565212 -74939341 - MLT1H LTR MaLR 0 549 382 1674 277 9 18 chr17 14565239 14565686 -74938867 + MLT1E2 LTR MaLR 1 443 -183 1871 200 50 74 chr17 14565836 14565921 -74938632 + MLT1D LTR MaLR 3 88 -417 2337 107 0 0 chr17 14565921 14566220 -74938333 + AluSc SINE Alu 1 299 -10 1871 200 50 74 chr17 14566220 14566649 -74937904 + MLT1D LTR MaLR 88 505 0 491 188 80 36 chr17 14566849 14566987 -74937566 - MLT1H LTR MaLR -394 155 12 286 282 106 12 chr17 14567402 14567487 -74937066 - MIR SINE MIR -67 141 49 731 298 113 73 chr17 14567561 14567751 -74936802 + MLT1L LTR MaLR 8 189 -426 2366 164 55 26 chr17 14567751 14568173 -74936380 + Tigger2a DNA MER2_type 1 434 0 731 298 113 73 chr17 14568173 14568194 -74936359 + MLT1L LTR MaLR 189 208 -407 707 280 54 0 chr17 14568194 14568362 -74936191 + MER45A DNA AcHobo 1 177 -1 731 298 113 73 chr17 14568362 14568700 -74935853 + MLT1L LTR MaLR 208 580 -35 254 324 83 0 chr17 14568735 14568843 -74935710 + MIR SINE MIR 75 191 -71 2626 139 21 32 chr17 14568861 14569294 -74935259 - MSTA LTR MaLR 0 428 1 2626 217 107 49 chr17 14569739 14569933 -74934620 + L1MDa LINE L1 18 199 -6341 2270 81 35 0 chr17 14569933 14570217 -74934336 - AluSc SINE Alu -15 294 1 2626 217 107 49 chr17 14570217 14570812 -74933741 + L1MDa LINE L1 199 758 -5782 2072 102 0 68 chr17 14570812 14571135 -74933418 + AluSc SINE Alu 1 301 -8 2626 217 107 49 chr17 14571135 14571656 -74932897 + L1MDa LINE L1 758 1561 -4979 2328 81 0 3 chr17 14571661 14571958 -74932595 + AluY SINE Alu 1 296 -15 275 256 116 0 chr17 14572022 14572108 -74932445 + MER5A DNA MER1_type 7 102 -87 907 147 0 0 chr17 14572134 14572263 -74932290 + FLAM_C SINE Alu 1 129 -4 198 0 0 0 chr17 14573587 14573609 -74930944 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 2190 67 0 0 chr17 14573951 14574218 -74930335 + AluY SINE Alu 39 305 -6 377 339 73 17 chr17 14574331 14574508 -74930045 + L2 LINE L2 2857 3043 -229 2107 84 84 0 chr17 14574575 14574859 -74929694 + AluSp SINE Alu 1 308 -5 357 276 0 13 chr17 14575032 14575108 -74929445 + L2 LINE L2 3196 3270 -2 1837 133 37 4 chr17 14575117 14575388 -74929165 + AluSx SINE Alu 1 280 -32 470 247 100 27 chr17 14576091 14576241 -74928312 + MIR SINE MIR 81 241 -21 198 214 0 114 chr17 14576255 14576325 -74928228 - L2 LINE L2 -5 3267 3206 772 286 78 27 chr17 14576589 14576959 -74927594 - L2 LINE L2 -542 2772 2384 496 286 71 16 chr17 14578224 14578406 -74926147 + MIR3 SINE MIR 3 194 -14 814 307 73 16 chr17 14580090 14580474 -74924079 - L1ME3A LINE L1 -1239 4907 4502 1219 256 86 66 chr17 14580482 14581667 -74922886 + L1ME3A LINE L1 4929 6162 -2 2708 199 12 4 chr17 14581753 14582265 -74922288 + MER34 LTR ERV1 27 542 0 1510 178 42 11 chr17 14583453 14583740 -74920813 - L1MC1 LINE L1 0 6333 6038 21 36 0 0 chr17 14583752 14583780 -74920773 + AT_rich Low_complexity Low_complexity 1 28 0 551 286 98 54 chr17 14584064 14584379 -74920174 + MLT1I LTR MaLR 81 409 0 405 244 38 38 chr17 14584414 14584545 -74920008 - L1 LINE L1 -1530 4616 4486 307 304 47 52 chr17 14584645 14584836 -74919717 - L1 LINE L1 -1845 4301 4112 695 241 14 0 chr17 14584873 14585018 -74919535 - MER58B DNA MER1_type 0 341 195 2250 113 0 7 chr17 14585316 14585625 -74918928 - AluSx SINE Alu -5 307 1 823 280 92 48 chr17 14585649 14586042 -74918511 - L2 LINE L2 -5 3308 2899 2270 204 105 11 chr17 14586111 14586543 -74918010 + MLT2B1 LTR ERVL 1 483 -37 255 61 0 0 chr17 14586543 14586576 -74917977 + (CA)n Simple_repeat Simple_repeat 2 34 0 2270 204 105 11 chr17 14586576 14586618 -74917935 + MLT2B1 LTR ERVL 483 520 0 1206 227 64 72 chr17 14587115 14587656 -74916897 - MER39 LTR ERV1 0 707 8 612 238 176 33 chr17 14587879 14588181 -74916372 + L2 LINE L2 2930 3274 -39 281 257 110 9 chr17 14588174 14588283 -74916270 + L2 LINE L2 3150 3269 -3 * 39588 75 14 9 chr17 14588365 14594466 -74910087 + L1PA5 LINE L1 11 6145 -9 531 178 11 0 chr17 14594466 14594556 -74909997 - MER58B DNA MER1_type -250 91 1 243 147 59 29 chr17 14594556 14594624 -74909929 - L1MEc LINE L1 -4121 2275 2206 37 0 0 0 chr17 14594624 14594661 -74909892 + AT_rich Low_complexity Low_complexity 1 37 0 334 314 46 27 chr17 14594892 14595213 -74909340 - L1MDa LINE L1 -3769 2771 2483 1518 195 51 43 chr17 14595224 14595594 -74908959 - MLT1A2 LTR MaLR -1 373 1 404 179 179 19 chr17 14596004 14596110 -74908443 - MER63 DNA MER1_type -313 749 1 207 100 0 0 chr17 14596132 14596162 -74908391 + (GGAGA)n Simple_repeat Simple_repeat 4 33 0 194 377 0 0 chr17 14596962 14597039 -74907514 - L2 LINE L2 -553 2761 2685 601 270 48 59 chr17 14598722 14598812 -74905741 + LTR16A LTR ERVL 88 177 -273 812 201 32 37 chr17 14598812 14599001 -74905552 - MER53 DNA DNA -1 188 1 601 270 48 59 chr17 14599001 14599180 -74905373 + LTR16A LTR ERVL 177 354 -96 786 292 135 24 chr17 14599428 14599983 -74904570 + L1ME4a LINE L1 5323 5947 -174 21 0 0 0 chr17 14599989 14600010 -74904543 + AT_rich Low_complexity Low_complexity 1 21 0 714 267 11 6 chr17 14600706 14600882 -74903671 - MER5B DNA MER1_type -1 177 1 500 269 50 31 chr17 14601524 14601712 -74902841 + MIR SINE MIR 16 204 -58 26 0 0 0 chr17 14601712 14601738 -74902815 + AT_rich Low_complexity Low_complexity 1 26 0 614 91 45 23 chr17 14601738 14601914 -74902639 + (TA)n Simple_repeat Simple_repeat 1 180 0 584 262 63 74 chr17 14602721 14603072 -74901481 + L2 LINE L2 1577 1923 -1391 1362 287 137 33 chr17 14603416 14603892 -74900661 - Zaphod DNA AcHobo -3370 661 236 2094 49 38 4 chr17 14603892 14604155 -74900398 - AluY SINE Alu -1 310 39 1362 287 137 33 chr17 14604155 14604218 -74900335 - Zaphod DNA AcHobo -3795 236 181 604 208 286 28 chr17 14604218 14604396 -74900157 - MER58A DNA MER1_type 0 224 1 1362 287 137 33 chr17 14604396 14604454 -74900099 - Zaphod DNA AcHobo -3850 181 1 462 354 52 31 chr17 14604480 14604771 -74899782 + L2 LINE L2 2510 2806 -508 300 278 67 67 chr17 14605214 14605378 -74899175 + L3 LINE CR1 1214 1380 -197 1981 132 0 10 chr17 14605378 14605673 -74898880 + AluSc SINE Alu 1 292 -17 300 278 67 67 chr17 14605673 14605717 -74898836 + L3 LINE CR1 1379 1422 -155 1048 200 69 103 chr17 14605958 14606092 -74898461 + MLT1C LTR MaLR 1 138 -329 2000 115 11 0 chr17 14606092 14606371 -74898182 + AluSx SINE Alu 21 302 -10 1048 200 69 103 chr17 14606371 14606596 -74897957 + MLT1C LTR MaLR 138 348 -119 2142 166 23 43 chr17 14606602 14607000 -74897553 + MLT1B LTR MaLR 1 390 0 688 319 11 7 chr17 14607065 14607335 -74897218 - L1ME3A LINE L1 -208 5962 5692 246 363 35 18 chr17 14607539 14607652 -74896901 - L2 LINE L2 -11 3261 3147 180 331 66 37 chr17 14608054 14608190 -74896363 + L3 LINE CR1 1413 1552 -25 2186 92 0 60 chr17 14608761 14609077 -74895476 - AluSg SINE Alu -13 297 1 294 319 14 35 chr17 14609307 14609451 -74895102 + MIR SINE MIR 4 144 -118 332 316 53 9 chr17 14609615 14609729 -74894824 + MER5A DNA MER1_type 63 181 -8 366 264 70 87 chr17 14611378 14611620 -74892933 + MLT1L LTR MaLR 157 394 -221 532 279 0 7 chr17 14611665 14611805 -74892748 + MLT1L LTR MaLR 477 615 0 2420 80 0 0 chr17 14612009 14612308 -74892245 + AluSc SINE Alu 1 299 -10 367 247 11 3 chr17 14612714 14612807 -74891746 + MER5A DNA MER1_type 3 109 -80 455 129 71 0 chr17 14613183 14613268 -74891285 + AluY SINE Alu 218 308 -3 12067 161 15 28 chr17 14613268 14613712 -74890841 + L1P LINE L1 2591 3039 -3107 2229 100 0 0 chr17 14613712 14614033 -74890520 - AluSc SINE Alu 0 321 1 12067 161 15 28 chr17 14614033 14615843 -74888710 + L1P LINE L1 3039 4818 -1328 887 272 45 47 chr17 14615946 14616416 -74888137 + HAL1b LINE L1 74 542 -806 186 71 0 0 chr17 14616730 14616758 -74887795 + (CA)n Simple_repeat Simple_repeat 1 28 0 2325 93 7 3 chr17 14616935 14617236 -74887317 - AluSc SINE Alu -7 302 1 921 206 51 55 chr17 14617823 14617854 -74886699 + MIR SINE MIR 8 38 -224 2555 65 0 0 chr17 14617854 14618162 -74886391 + AluY SINE Alu 4 311 0 921 206 51 55 chr17 14618162 14618383 -74886170 + MIR SINE MIR 38 259 -3 345 333 15 15 chr17 14621384 14621519 -74883034 + MER5A DNA MER1_type 27 161 -28 186 43 0 0 chr17 14622199 14622222 -74882331 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1431 161 83 12 chr17 14622227 14622364 -74882189 - AluJb SINE Alu -40 272 146 264 59 0 0 chr17 14622364 14622398 -74882155 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 1431 161 83 12 chr17 14622398 14622514 -74882039 - AluJb SINE Alu -166 146 1 1268 193 55 29 chr17 14622792 14623067 -74881486 - AluJo SINE Alu -30 282 1 2096 208 28 63 chr17 14623614 14624304 -74880249 + L1MC/D LINE L1 5146 5818 -743 1831 263 10 14 chr17 14624299 14624804 -74879749 + L1ME1 LINE L1 22 524 -5872 * 1131 203 35 61 chr17 14624801 14625176 -74879377 - L1MEc LINE L1 -4126 2270 1906 * 710 202 86 34 chr17 14625173 14625440 -74879113 - L1M4 LINE L1 -1556 4590 4310 * 254 203 29 29 chr17 14625439 14625508 -74879045 - L1M4 LINE L1 -1556 4590 4522 * 1085 263 48 0 chr17 14625507 14625819 -74878734 - L1MEc LINE L1 -4492 1904 1578 4577 227 66 28 chr17 14625828 14628010 -74876543 + L1ME1 LINE L1 3968 6230 -5 684 249 27 27 chr17 14628022 14628247 -74876306 + L1ME1 LINE L1 5813 6037 -129 694 262 110 4 chr17 14628273 14628510 -74876043 + L1MC/D LINE L1 5555 5816 -1992 1114 215 72 54 chr17 14628659 14628994 -74875559 + MER2 DNA MER2_type 2 342 -2 333 47 0 0 chr17 14629939 14629982 -74874571 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2204 83 0 4 chr17 14629987 14630263 -74874290 - AluSc SINE Alu -34 275 1 235 319 43 69 chr17 14630452 14630568 -74873985 + L2 LINE L2 3138 3250 -22 1326 213 211 38 chr17 14630877 14631323 -74873230 + L1ME3A LINE L1 5422 5789 -381 1832 164 0 3 chr17 14631323 14631610 -74872943 + AluJo SINE Alu 7 292 -20 1326 213 211 38 chr17 14631610 14631780 -74872773 + L1ME3A LINE L1 5789 6169 -1 336 278 165 0 chr17 14632081 14632214 -74872339 + MER5A DNA MER1_type 1 155 -34 2676 187 10 55 chr17 14632215 14632797 -74871756 + MER74A LTR ERVL 3 558 0 2212 123 0 0 chr17 14632801 14633101 -74871452 + AluSg SINE Alu 1 300 -10 1795 167 0 14 chr17 14633572 14633866 -74870687 + AluJo SINE Alu 1 290 -22 2202 116 3 7 chr17 14634261 14634562 -74869991 + AluSx SINE Alu 1 300 -12 2180 132 3 0 chr17 14634696 14635006 -74869547 + AluSx SINE Alu 1 311 -1 229 341 154 10 chr17 14635016 14635224 -74869329 - MIR SINE MIR -12 250 13 1327 212 72 80 chr17 14635481 14635871 -74868682 + LTR26E LTR ERV1 1 456 -166 2430 76 7 0 chr17 14635871 14636175 -74868378 + AluSc SINE Alu 1 306 -3 1327 212 72 80 chr17 14636175 14636341 -74868212 + LTR26E LTR ERV1 456 622 0 261 172 52 0 chr17 14637135 14637193 -74867360 + L2 LINE L2 2995 3055 -217 1667 93 0 0 chr17 14637212 14637426 -74867127 - AluSc SINE Alu -5 304 91 2254 107 0 38 chr17 14638161 14638480 -74866073 - AluSx SINE Alu -5 307 1 413 273 27 27 chr17 14639211 14639361 -74865192 + MER103 DNA DNA 2 151 -15 2295 90 0 0 chr17 14639524 14639838 -74864715 + AluY SINE Alu 1 311 0 244 250 25 150 chr17 14639886 14640046 -74864507 + MIR SINE MIR 28 167 -95 655 303 48 20 chr17 14640057 14640308 -74864245 - MIR SINE MIR 0 262 5 577 276 126 20 chr17 14640312 14640511 -74864042 - L2 LINE L2 0 3313 3094 1899 215 11 23 chr17 14640896 14641475 -74863078 + L1MB8 LINE L1 5092 5666 -518 1648 190 13 10 chr17 14641475 14641786 -74862767 + AluJo SINE Alu 1 312 0 21 36 0 0 chr17 14641798 14641826 -74862727 + AT_rich Low_complexity Low_complexity 1 28 0 2366 125 15 7 chr17 14641872 14641888 -74862665 + THE1A LTR MaLR 1 15 -340 2419 107 56 3 chr17 14641888 14642225 -74862328 + THE1A LTR MaLR 1 355 0 11938 102 23 0 chr17 14642225 14643769 -74860784 + THE1A-int LTR MaLR 1 1580 0 2366 125 15 7 chr17 14643769 14644114 -74860439 + THE1A LTR MaLR 14 348 -7 1560 181 0 21 chr17 14644114 14644396 -74860157 + AluJo SINE Alu 26 301 -11 673 179 65 16 chr17 14644412 14644535 -74860018 + FLAM_C SINE Alu 2 130 -13 1882 194 71 26 chr17 14644536 14644989 -74859564 + L1MB8 LINE L1 5669 6141 -37 3888 129 14 21 chr17 14644989 14645485 -74859068 + MER39B LTR ERV1 1 494 -159 2334 79 0 13 chr17 14645485 14645789 -74858764 + AluY SINE Alu 1 300 -11 3888 129 14 21 chr17 14645789 14645914 -74858639 + MER39B LTR ERV1 494 618 -35 2631 111 19 11 chr17 14645923 14646283 -74858270 + THE1B LTR MaLR 1 363 -1 264 65 0 43 chr17 14646283 14646320 -74858233 + L1MB8 LINE L1 6142 6178 0 679 78 0 0 chr17 14646382 14646472 -74858081 + L1MA8 LINE L1 6002 6091 -200 3162 106 38 100 chr17 14646472 14646798 -74857755 + MER4B LTR ERV1 1 273 -337 2347 76 7 0 chr17 14646798 14647086 -74857467 - AluSq SINE Alu -23 290 1 3162 106 38 100 chr17 14647086 14647371 -74857182 + MER4B LTR ERV1 273 574 -36 1093 135 26 0 chr17 14647395 14647588 -74856965 + L1MA8 LINE L1 6082 6279 -12 1956 170 63 35 chr17 14647595 14648024 -74856529 + LTR56 LTR ERV1 5 445 0 1885 168 128 97 chr17 14648054 14648630 -74855923 + LTR49 LTR ERV1 2 595 0 301 253 13 0 chr17 14648632 14648707 -74855846 + L1ME LINE L1 5473 5548 -618 304 238 67 9 chr17 14648714 14648819 -74855734 - MER113 DNA MER1_type? -405 116 6 273 249 65 77 chr17 14648950 14649119 -74855434 - MIR SINE MIR 0 262 96 2526 62 0 10 chr17 14649534 14649840 -74854713 - AluY SINE Alu -8 303 1 1895 201 62 28 chr17 14649875 14650312 -74854241 + LTR2B LTR ERV1 32 483 -7 378 61 0 0 chr17 14651016 14651065 -74853488 + (CA)n Simple_repeat Simple_repeat 2 50 0 205 316 176 0 chr17 14651423 14651559 -74852994 - MIR SINE MIR -31 231 72 615 280 57 0 chr17 14651568 14651725 -74852828 - MER63A DNA MER1_type -29 181 16 4358 146 15 14 chr17 14651742 14652025 -74852528 + MER50 LTR ERV1 1 282 -452 2180 139 124 21 chr17 14652025 14652413 -74852140 + MSTA LTR MaLR 1 428 0 4358 146 15 14 chr17 14652413 14652850 -74851703 + MER50 LTR ERV1 282 722 -12 482 191 22 52 chr17 14653066 14653202 -74851351 + MER113 DNA MER1_type? 14 145 -376 3468 173 17 3 chr17 14653316 14653905 -74850648 - LTR59 LTR ERV1 0 597 1 2854 202 42 78 chr17 14653909 14654696 -74849857 - LTR59-int LTR ERV1 -5 6753 5995 4446 170 21 33 chr17 14654697 14655491 -74849062 + LTR1 LTR ERV1 1 785 0 1582 202 56 24 chr17 14655491 14655982 -74848571 + HUERS-P2 LTR ERV1 1 572 -2516 25710 164 15 15 chr17 14656020 14661143 -74843410 + HUERS-P2 LTR ERV1 540 5869 -425 467 203 0 0 chr17 14661142 14661239 -74843314 - LTR49-int LTR ERV1 -3222 2724 851 * 1926 99 65 41 chr17 14661246 14661432 -74843121 - AluSx SINE Alu -12 300 103 2053 174 50 21 chr17 14661432 14661869 -74842684 - LTR7 LTR ERV1 0 450 1 1926 99 65 41 chr17 14661869 14661975 -74842578 - AluSx SINE Alu -209 103 1 1737 207 75 44 chr17 14661977 14662494 -74842059 - LTR49-int LTR ERV1 -4050 2281 1670 394 170 10 10 chr17 14662511 14662611 -74841942 + (TA)n Simple_repeat Simple_repeat 1 100 0 1624 168 73 75 chr17 14662622 14663186 -74841367 - LTR49-int LTR ERV1 -4681 1650 886 203 399 101 0 chr17 14663288 14663436 -74841117 - L3 LINE CR1 -1193 384 222 321 26 0 0 chr17 14663509 14663547 -74841006 + (CA)n Simple_repeat Simple_repeat 2 39 0 243 232 85 37 chr17 14663609 14663691 -74840862 - MIR SINE MIR -69 193 108 889 264 109 81 chr17 14663897 14664491 -74840062 + MLT1L LTR MaLR 1 611 -4 1068 176 11 5 chr17 14664694 14664881 -74839672 + MER5A DNA MER1_type 1 188 -1 201 235 123 25 chr17 14665843 14665924 -74838629 + MIR SINE MIR 118 206 -56 2220 116 0 7 chr17 14666082 14666385 -74838168 - AluSq SINE Alu -12 301 1 258 279 74 74 chr17 14666597 14666841 -74837712 - L2 LINE L2 -212 3060 2817 1661 263 63 30 chr17 14668738 14669506 -74835047 + L1MDb LINE L1 775 1538 -4868 2172 112 3 23 chr17 14669506 14669810 -74834743 + AluSx SINE Alu 1 298 -14 1661 263 63 30 chr17 14669810 14669901 -74834652 + L1MDb LINE L1 1538 1624 -4782 1433 202 52 14 chr17 14669954 14670267 -74834286 + AluJo SINE Alu 13 312 0 2625 255 102 22 chr17 14670613 14671592 -74832961 + L1MDb LINE L1 1733 2632 -3774 4700 149 34 18 chr17 14671592 14672364 -74832189 + LTR1 LTR ERV1 2 785 0 2625 255 102 22 chr17 14672364 14673108 -74831445 + L1MDb LINE L1 2632 3591 -2815 988 300 72 22 chr17 14673232 14673632 -74830921 - MLT1J LTR MaLR -91 420 1 888 201 66 105 chr17 14674059 14674482 -74830071 - MER66A LTR ERV1 -143 435 97 287 230 11 11 chr17 14674482 14674569 -74829984 + L2 LINE L2 2473 2559 -755 1224 181 31 44 chr17 14674659 14674886 -74829667 - MER58A DNA MER1_type 0 224 1 448 336 47 44 chr17 14675449 14675723 -74828830 + Charlie8 DNA MER1_type 2 276 -2141 264 119 24 0 chr17 14675893 14675935 -74828618 + Charlie8 DNA MER1_type 1365 1407 -1010 252 373 63 16 chr17 14675946 14676072 -74828481 + MIR SINE MIR 16 147 -61 2125 182 3 42 chr17 14677635 14678015 -74826538 + MLT1A1 LTR MaLR 1 365 0 342 309 117 40 chr17 14678468 14678691 -74825862 + MIR SINE MIR 23 262 0 315 267 100 87 chr17 14678737 14678853 -74825700 + MER5B DNA MER1_type 2 122 -56 378 61 0 0 chr17 14678853 14678902 -74825651 + (TG)n Simple_repeat Simple_repeat 2 50 0 315 267 100 87 chr17 14678902 14678935 -74825618 + MER5B DNA MER1_type 122 153 -25 386 339 51 57 chr17 14679595 14679708 -74824845 - MER5B DNA MER1_type -2 176 63 2284 104 0 0 chr17 14679708 14680005 -74824548 - AluSg SINE Alu -13 297 1 386 339 51 57 chr17 14680005 14680068 -74824485 - MER5B DNA MER1_type -115 63 1 374 206 32 2 chr17 14680195 14680343 -74824210 - MER53 DNA DNA 0 189 5 740 317 39 12 chr17 14680458 14680802 -74823751 + MLT1K LTR MaLR 59 439 -149 1632 168 104 43 chr17 14680812 14680985 -74823568 + L1 LINE L1 4920 5081 -1065 1988 152 3 22 chr17 14680985 14681300 -74823253 - AluSx SINE Alu -3 309 1 1632 168 104 43 chr17 14681300 14681502 -74823051 + L1 LINE L1 5081 5318 -828 430 223 58 43 chr17 14681502 14681641 -74822912 + MLT1K LTR MaLR 448 588 0 220 297 125 0 chr17 14681895 14681959 -74822594 + L2 LINE L2 3196 3267 -5 231 307 179 21 chr17 14683520 14683660 -74820893 - L3 LINE CR1 -1 1576 1415 832 224 33 0 chr17 14683684 14683836 -74820717 + FRAM SINE Alu 1 156 -20 406 298 63 58 chr17 14683861 14684066 -74820487 - L3 LINE CR1 -178 1399 1194 2038 82 14 25 chr17 14684345 14684626 -74819927 + AluSx SINE Alu 1 278 -34 317 215 49 0 chr17 14686026 14686170 -74818383 + (TA)n Simple_repeat Simple_repeat 2 152 0 22 0 0 0 chr17 14686192 14686214 -74818339 + AT_rich Low_complexity Low_complexity 1 22 0 198 277 0 46 chr17 14686313 14686378 -74818175 + L2 LINE L2 3244 3305 -8 192 100 0 100 chr17 14687361 14687411 -74817142 + L2 LINE L2 3269 3313 0 201 243 7 143 chr17 14687414 14687554 -74816999 + L3 LINE CR1 1146 1266 -311 557 250 51 6 chr17 14687554 14687730 -74816823 + MER96B DNA MER1_type? 232 415 -2 3026 85 0 5 chr17 14688036 14688423 -74816130 + MLT2A1 LTR ERVL 1 385 -59 974 130 16 120 chr17 14688433 14688678 -74815875 + MLT1B LTR MaLR 177 388 -2 2079 134 3 7 chr17 14689286 14689593 -74814960 + AluSg SINE Alu 1 306 -4 468 291 32 13 chr17 14690705 14690863 -74813690 + MIR SINE MIR 5 165 -97 186 204 148 0 chr17 14691019 14691073 -74813480 + MIR SINE MIR 85 146 -116 320 252 246 29 chr17 14691887 14692228 -74812325 - L1ME4a LINE L1 0 6121 5707 316 312 58 33 chr17 14692370 14692690 -74811863 - L1ME4a LINE L1 -681 5440 5255 949 295 44 33 chr17 14692970 14693508 -74811045 - L1MC4a LINE L1 -297 5824 5441 212 271 71 0 chr17 14693714 14693799 -74810754 - MER5C DNA MER1_type -1 323 233 322 233 47 0 chr17 14693825 14693911 -74810642 - MER5C DNA MER1_type -200 124 35 2118 113 17 7 chr17 14694465 14694757 -74809796 + AluSx SINE Alu 3 297 -15 701 105 0 76 chr17 14694765 14694870 -74809683 + (GGAA)n Simple_repeat Simple_repeat 3 93 -67 2095 125 0 0 chr17 14694870 14695321 -74809232 + AluSg SINE Alu 1 451 0 701 105 0 76 chr17 14695321 14695385 -74809168 + (GGAA)n Simple_repeat Simple_repeat 93 160 0 334 362 14 50 chr17 14696131 14696276 -74808277 + HAL1 LINE L1 386 522 -1985 1056 224 23 0 chr17 14696276 14696495 -74808058 - MER58A DNA MER1_type 0 224 1 334 362 14 50 chr17 14696495 14696567 -74807986 + HAL1 LINE L1 522 595 -1912 392 297 34 71 chr17 14696726 14697049 -74807504 - L1 LINE L1 -2679 3467 3157 291 304 156 56 chr17 14697066 14697477 -74807076 - L2 LINE L2 -1071 2243 1792 261 242 58 58 chr17 14698188 14698308 -74806245 - LTR28 LTR ERV1 -1 1019 900 526 260 109 71 chr17 14698404 14698843 -74805710 - LTR1B LTR ERV1 -328 498 43 2925 177 35 3 chr17 14698866 14699436 -74805117 - HUERS-P2 LTR ERV1 0 3088 2467 * 3588 213 25 25 chr17 14699435 14700201 -74804352 - HUERS-P2 LTR ERV1 -1707 1381 616 516 194 14 76 chr17 14700172 14700316 -74804237 - HUERS-P2 LTR ERV1 -2952 136 2 * 866 237 120 60 chr17 14700522 14700976 -74803577 - LTR1B LTR ERV1 -38 1240 39 225 131 49 0 chr17 14701195 14701256 -74803297 + L1MCa LINE L1 2005 2068 -4358 403 244 0 21 chr17 14702333 14702434 -74802119 + MER51-int LTR ERV1 154 271 -4640 2335 110 49 9 chr17 14702895 14703426 -74801127 + MER51A LTR ERV1 2 625 -9 1316 149 39 71 chr17 14703460 14703741 -74800812 + MER51A-int LTR ERV1 1 272 -7544 1272 206 24 65 chr17 14703754 14704094 -74800459 + MER51A-int LTR ERV1 247 572 -7244 440 210 0 65 chr17 14704111 14704235 -74800318 + MER51-int LTR ERV1 2472 2587 -2428 341 234 16 62 chr17 14704305 14704433 -74800120 + MER51-int LTR ERV1 693 814 -7002 503 261 39 65 chr17 14704509 14704812 -74799741 + MER51-int LTR ERV1 1434 1630 -5046 313 309 65 0 chr17 14705091 14705214 -74799339 + MER51-int LTR ERV1 1900 2030 -1058 524 341 8 11 chr17 14705431 14705698 -74798855 + MER51-int LTR ERV1 2342 2607 -4069 959 128 63 11 chr17 14705841 14706020 -74798533 + MER51A LTR ERV1 143 426 -208 627 87 76 0 chr17 14706578 14706670 -74797883 - AluSg/x SINE Alu -46 266 168 2412 167 31 31 chr17 14706670 14707118 -74797435 + MER70A LTR ERVL 25 472 0 846 219 17 6 chr17 14707409 14707587 -74796966 - MLT2B3 LTR ERVL -374 180 1 290 276 0 26 chr17 14707633 14707709 -74796844 - L2 LINE L2 -1 3312 3239 23 54 0 0 chr17 14707733 14707770 -74796783 + AT_rich Low_complexity Low_complexity 1 37 0 1915 191 82 32 chr17 14707814 14708275 -74796278 - LTR2B LTR ERV1 0 490 7 1059 142 26 21 chr17 14708275 14708465 -74796088 - L1MA7 LINE L1 -44 6247 6057 241 281 26 98 chr17 14708811 14708964 -74795589 + MER5A DNA MER1_type 35 176 -13 2466 33 40 10 chr17 14709407 14709709 -74794844 + AluY SINE Alu 1 311 0 340 309 53 20 chr17 14710646 14710798 -74793755 - MARNA DNA Mariner -350 236 80 1387 159 5 9 chr17 14711377 14711597 -74792956 + MSTB LTR MaLR 1 219 -207 330 245 75 123 chr17 14712108 14712212 -74792341 + L1ME1 LINE L1 5955 6062 -104 1794 158 34 14 chr17 14712212 14712504 -74792049 + AluJb SINE Alu 1 298 -14 2342 68 0 0 chr17 14712507 14712802 -74791751 + L1PA5 LINE L1 5856 6150 -4 330 245 75 123 chr17 14712802 14712905 -74791648 + L1ME1 LINE L1 6064 6156 -10 245 172 47 16 chr17 14713159 14713223 -74791330 - MER103 DNA DNA -9 157 92 22 0 0 0 chr17 14713308 14713330 -74791223 + AT_rich Low_complexity Low_complexity 1 22 0 189 74 0 0 chr17 14713340 14713367 -74791186 + (CA)n Simple_repeat Simple_repeat 2 28 0 804 211 89 117 chr17 14713372 14713741 -74790812 - MLT2D LTR ERVL -50 364 6 397 193 24 12 chr17 14713752 14713835 -74790718 - MER33 DNA MER1_type -230 94 11 464 193 0 0 chr17 14713844 14713932 -74790621 - MER103 DNA DNA -69 97 10 207 171 49 0 chr17 14713954 14713995 -74790558 + (ATTG)n Simple_repeat Simple_repeat 2 44 0 668 260 35 40 chr17 14714088 14714288 -74790265 + Charlie8 DNA MER1_type 39 237 -2180 262 325 8 43 chr17 14714446 14714563 -74789990 - MIR SINE MIR -56 152 40 387 0 0 0 chr17 14715141 14715184 -74789369 + (TG)n Simple_repeat Simple_repeat 1 43 0 180 0 0 0 chr17 14717597 14717617 -74786936 + (A)n Simple_repeat Simple_repeat 1 20 0 1135 207 43 57 chr17 14719988 14720030 -74784523 - MER58B DNA MER1_type -2079 341 300 2301 109 0 0 chr17 14720030 14720332 -74784221 - AluSx SINE Alu -10 302 1 1135 207 43 57 chr17 14720332 14720589 -74783964 - MER58B DNA MER1_type -2120 300 46 265 250 12 0 chr17 14720706 14720786 -74783767 + (TGAA)n Simple_repeat Simple_repeat 4 84 0 349 304 71 36 chr17 14720909 14721077 -74783476 - L2 LINE L2 0 3313 3140 1392 159 0 21 chr17 14721156 14721389 -74783164 + AluJb SINE Alu 73 300 -12 1170 220 75 12 chr17 14721548 14721871 -74782682 + MLT1A1 LTR MaLR 9 365 0 453 260 86 40 chr17 14722610 14723006 -74781547 + L1ME LINE L1 4928 5341 -805 215 247 82 14 chr17 14723025 14723098 -74781455 - L2 LINE L2 0 3313 3236 397 283 12 64 chr17 14723132 14723178 -74781375 + LTR16A LTR ERVL 99 146 -304 2545 138 41 5 chr17 14723178 14723591 -74780962 + MSTA LTR MaLR 1 428 0 397 283 12 64 chr17 14723591 14723717 -74780836 + LTR16A LTR ERVL 146 262 -188 276 313 103 36 chr17 14723845 14724040 -74780513 + L1ME LINE L1 5386 5593 -528 861 142 0 8 chr17 14724291 14724418 -74780135 - FLAM_C SINE Alu -16 127 2 2119 56 44 7 chr17 14725175 14725473 -74779080 - AluY SINE Alu 0 310 3 225 319 44 9 chr17 14725483 14725596 -74778957 + L2 LINE L2 1933 2049 -1265 1897 147 20 3 chr17 14725601 14725900 -74778653 - AluJb SINE Alu -8 304 1 182 311 67 52 chr17 14725979 14726246 -74778307 - L2 LINE L2 -1265 2049 1779 557 186 10 0 chr17 14726383 14726485 -74778068 - MER58B DNA MER1_type 0 341 239 1054 146 38 16 chr17 14726532 14726717 -74777836 - MER5A DNA MER1_type 0 189 1 751 282 0 5 chr17 14726992 14727201 -74777352 + MER63A DNA MER1_type 1 208 -2 259 289 94 57 chr17 14727645 14727804 -74776749 - MER5B DNA MER1_type -5 173 9 2014 137 0 49 chr17 14727894 14728222 -74776331 + AluJo SINE Alu 1 312 0 256 379 8 15 chr17 14728299 14728431 -74776122 - MIR3 SINE MIR -73 135 5 191 319 28 0 chr17 14729804 14729876 -74774677 + MIR SINE MIR 57 130 -78 687 101 0 0 chr17 14730046 14730145 -74774408 - L1PA8 LINE L1 -2 6170 6072 2275 117 0 0 chr17 14730317 14730625 -74773928 - AluSc SINE Alu -1 308 1 246 304 14 0 chr17 14730626 14730695 -74773858 - MIR SINE MIR -114 148 79 2357 100 0 3 chr17 14731187 14731497 -74773056 + AluSx SINE Alu 1 309 -3 262 203 54 27 chr17 14732174 14732248 -74772305 + L1MC5 LINE L1 7849 7924 -37 2328 105 0 3 chr17 14732640 14732945 -74771608 + AluSg SINE Alu 1 304 -6 2174 172 50 12 chr17 14733277 14733322 -74771231 + MSTA LTR MaLR 1 43 -385 1622 197 14 3 chr17 14733322 14733611 -74770942 + AluJb SINE Alu 6 297 -15 2174 172 50 12 chr17 14733611 14733991 -74770562 + MSTA LTR MaLR 43 428 0 464 289 185 35 chr17 14734519 14734865 -74769688 + MLT1L LTR MaLR 210 607 -8 335 295 33 16 chr17 14735450 14735572 -74768981 + L1ME1 LINE L1 6043 6166 0 462 304 104 66 chr17 14735572 14735714 -74768839 + L1M4 LINE L1 2235 2370 -3776 1980 112 0 25 chr17 14735714 14736000 -74768553 + AluSx SINE Alu 34 312 0 462 304 104 66 chr17 14736000 14736767 -74767786 + L1M4 LINE L1 2370 3179 -2967 624 215 40 105 chr17 14736861 14737089 -74767464 - MER58C DNA MER1_type -1 214 2 517 290 28 23 chr17 14737089 14737265 -74767288 + MER5B DNA MER1_type 2 178 0 948 185 45 6 chr17 14737273 14737451 -74767102 + MER5A DNA MER1_type 1 185 -4 21 36 0 0 chr17 14737676 14737704 -74766849 + AT_rich Low_complexity Low_complexity 1 28 0 2228 127 0 0 chr17 14738538 14738838 -74765715 + AluSg SINE Alu 1 300 -10 2047 121 0 4 chr17 14740282 14740644 -74763909 - AluSc SINE Alu 0 361 1 189 304 9 54 chr17 14740666 14740778 -74763775 + L2 LINE L2 2569 2675 -639 1521 174 61 0 chr17 14741173 14741474 -74763079 - AluJb SINE Alu 0 319 3 666 266 138 56 chr17 14741794 14742170 -74762383 - MLT1I LTR MaLR -2 407 1 345 216 11 23 chr17 14742206 14742294 -74762259 - LTR67 LTR ERVL -13 544 458 524 234 41 29 chr17 14743356 14743505 -74761048 - MLT1H LTR MaLR -15 609 384 473 302 58 50 chr17 14743561 14743839 -74760714 - MLT1H LTR MaLR -258 291 12 1149 269 72 75 chr17 14744917 14745642 -74758911 + Charlie7 DNA MER1_type 2 724 -1888 586 243 91 66 chr17 14746052 14746145 -74758408 - MIR SINE MIR -6 256 167 1984 147 54 48 chr17 14746145 14746424 -74758129 + MER1B DNA MER1_type 2 278 -2432 2162 95 0 11 chr17 14746424 14746707 -74757846 + AluSq SINE Alu 1 280 -33 411 21 0 0 chr17 14746707 14746755 -74757798 + (CA)n Simple_repeat Simple_repeat 1 48 0 1984 147 54 48 chr17 14746755 14746808 -74757745 + MER1B DNA MER1_type 277 337 0 586 243 91 66 chr17 14746808 14746819 -74757734 - MIR SINE MIR -95 167 158 2175 206 127 39 chr17 14746819 14747364 -74757189 + MLT1E LTR MaLR 1 593 0 586 243 91 66 chr17 14747364 14747501 -74757052 - MIR SINE MIR -104 158 8 513 316 0 13 chr17 14747850 14748008 -74756545 + MIR3 SINE MIR 20 175 -33 301 292 124 22 chr17 14749023 14749160 -74755393 + L2 LINE L2 2871 3021 -251 367 223 80 27 chr17 14749289 14749401 -74755152 + LTR16C LTR ERVL 371 488 -3 412 199 133 60 chr17 14749496 14749647 -74754906 + L2 LINE L2 3152 3313 0 207 0 0 0 chr17 14750009 14750032 -74754521 + (A)n Simple_repeat Simple_repeat 1 23 0 603 252 63 19 chr17 14751055 14751261 -74753292 + L2 LINE L2 2684 2898 -416 4073 154 24 63 chr17 14751325 14751853 -74752700 + L1MB3 LINE L1 5379 5863 -320 1761 114 0 4 chr17 14751853 14752089 -74752464 + AluSg SINE Alu 1 235 -75 4073 154 24 63 chr17 14752089 14752398 -74752155 + L1MB3 LINE L1 5863 6183 0 647 241 57 88 chr17 14752752 14752816 -74751737 + L1ME2 LINE L1 5812 5876 -288 2487 63 0 0 chr17 14752816 14753116 -74751437 + AluY SINE Alu 1 300 -11 647 241 57 88 chr17 14753116 14753403 -74751150 + L1ME2 LINE L1 5876 6152 -12 606 89 38 0 chr17 14753712 14753791 -74750762 + AluY SINE Alu 2 83 -227 2214 96 24 0 chr17 14753903 14754195 -74750358 + AluSp SINE Alu 1 299 -14 1131 166 9 23 chr17 14754367 14754584 -74749969 - AluSg/x SINE Alu -14 298 85 938 158 33 0 chr17 14754604 14754788 -74749765 - L1MA8 LINE L1 -244 6047 5858 349 291 30 15 chr17 14754929 14755063 -74749490 + LTR37A LTR ERV1 146 281 -145 592 137 11 0 chr17 14755898 14755993 -74748560 - MER83 LTR ERV1 0 448 353 2431 141 37 5 chr17 14756032 14756466 -74748087 + Tigger3b DNA MER2_type 209 656 -575 759 224 13 7 chr17 14756468 14756620 -74747933 - AluJb SINE Alu -12 300 148 1009 259 34 17 chr17 14758544 14758838 -74745715 - MER89-int LTR ERV1 -5142 1659 1361 1577 196 63 9 chr17 14758847 14759178 -74745375 - MLT1A1 LTR MaLR -4 361 13 339 244 0 22 chr17 14759190 14759280 -74745273 - MER89-int LTR ERV1 -5444 1357 1270 203 376 10 0 chr17 14760374 14760475 -74744078 + (CA)n Simple_repeat Simple_repeat 2 103 0 1402 181 67 38 chr17 14761369 14761965 -74742588 + L1MC/D LINE L1 2350 2961 -3579 * 1704 240 106 44 chr17 14761963 14762668 -74741885 + L1MC/D LINE L1 3369 4117 -2423 2717 162 27 17 chr17 14762698 14763017 -74741536 + Tigger7 DNA MER2_type 17 344 -389 2491 133 5 19 chr17 14763017 14763385 -74741168 + THE1B LTR MaLR 1 363 -1 2717 162 27 17 chr17 14763385 14763539 -74741014 + Tigger7 DNA MER2_type 344 495 -238 2292 78 7 7 chr17 14763539 14763834 -74740719 + AluY SINE Alu 1 295 -16 716 256 111 87 chr17 14763836 14764967 -74739586 + L1MC/D LINE L1 4950 5722 -818 920 224 45 5 chr17 14765093 14765294 -74739259 + MIR SINE MIR 28 236 -26 198 224 0 0 chr17 14765307 14765356 -74739197 + (CAT)n Simple_repeat Simple_repeat 2 50 0 22 35 0 0 chr17 14765935 14765964 -74738589 + AT_rich Low_complexity Low_complexity 1 29 0 986 277 113 38 chr17 14766132 14766656 -74737897 - MLT1L LTR MaLR -12 603 41 377 282 149 22 chr17 14766770 14766951 -74737602 + MLT1L LTR MaLR 1 204 -411 564 252 20 7 chr17 14767119 14767270 -74737283 + MLT1L LTR MaLR 455 607 -8 2445 68 0 0 chr17 14767773 14768066 -74736487 + AluY SINE Alu 15 307 -4 22 0 0 0 chr17 14768658 14768680 -74735873 + AT_rich Low_complexity Low_complexity 1 22 0 1452 147 56 56 chr17 14768680 14768986 -74735567 - L1MA9 LINE L1 -22 6290 5985 2579 117 28 53 chr17 14769050 14769094 -74735459 - MSTA LTR MaLR -2 426 382 2063 103 48 0 chr17 14769094 14769384 -74735169 + AluSc SINE Alu 1 304 -5 2579 117 28 53 chr17 14769384 14769776 -74734777 - MSTA LTR MaLR -46 382 1 1269 194 104 7 chr17 14769866 14770155 -74734398 + L1MD3 LINE L1 7655 7971 -24 915 179 124 79 chr17 14770699 14771119 -74733434 - L1MC5 LINE L1 -30 7931 7493 344 247 0 0 chr17 14771137 14771214 -74733339 - L1MC5 LINE L1 -518 7443 7367 917 326 32 58 chr17 14771321 14771779 -74732774 + L2 LINE L2 2270 2707 -607 2192 121 7 0 chr17 14771779 14772086 -74732467 + AluSq SINE Alu 1 309 -4 917 326 32 58 chr17 14772086 14772304 -74732249 + L2 LINE L2 2707 2929 -385 238 313 72 0 chr17 14772510 14772593 -74731960 - L2 LINE L2 -27 3286 3198 3024 183 19 42 chr17 14772636 14773203 -74731350 + MLT2B3 LTR ERVL 1 554 0 2166 114 13 0 chr17 14773326 14773633 -74730920 + AluSq SINE Alu 1 311 -2 639 184 0 88 chr17 14774102 14774165 -74730388 + AluJb SINE Alu 2 48 -264 2249 100 13 0 chr17 14774165 14774464 -74730089 - AluSp SINE Alu -10 303 1 639 184 0 88 chr17 14774464 14774536 -74730017 + AluJb SINE Alu 48 125 -187 469 57 11 114 chr17 14774536 14774624 -74729929 + MLT2B2 LTR ERVL 437 515 0 215 219 0 0 chr17 14774626 14774667 -74729886 + (TGAA)n Simple_repeat Simple_repeat 2 42 0 1041 183 0 0 chr17 14774703 14774867 -74729686 + AluJb SINE Alu 134 297 -15 277 271 105 60 chr17 14776009 14776275 -74728278 - HAL1b LINE L1 -650 698 421 5853 182 22 12 chr17 14776533 14777950 -74726603 - L1MC2 LINE L1 -8 6336 4906 229 308 19 65 chr17 14778246 14778353 -74726200 - MER94 DNA DNA -27 107 6 378 225 12 0 chr17 14778521 14778601 -74725952 - MIR SINE MIR -71 191 111 1711 151 7 22 chr17 14778857 14779135 -74725418 + AluJb SINE Alu 1 274 -38 315 0 0 0 chr17 14779135 14779170 -74725383 + (TC)n Simple_repeat Simple_repeat 1 35 0 * 378 0 0 0 chr17 14779169 14779211 -74725342 + (CA)n Simple_repeat Simple_repeat 1 42 0 433 223 23 0 chr17 14779823 14779929 -74724624 + MER5A DNA MER1_type 4 112 -77 693 106 0 0 chr17 14781226 14781330 -74723223 + (TTCC)n Simple_repeat Simple_repeat 3 106 0 1952 94 91 14 chr17 14781330 14781617 -74722936 - AluSc SINE Alu 0 309 1 255 240 0 0 chr17 14781619 14781669 -74722884 + MER91 DNA MER1_type 144 193 -3 1989 121 0 3 chr17 14783060 14783342 -74721211 + AluSx SINE Alu 1 281 -31 891 316 10 10 chr17 14783364 14783677 -74720876 - LTR16B LTR ERVL -114 350 38 1960 110 24 17 chr17 14783819 14784111 -74720442 + L1MA8 LINE L1 5995 6288 -3 2230 119 0 6 chr17 14784122 14784433 -74720120 + AluSx SINE Alu 1 309 -3 234 226 172 61 chr17 14785237 14785361 -74719192 - MIR SINE MIR -66 142 35 353 105 0 132 chr17 14785426 14785502 -74719051 - L1PA10 LINE L1 0 6168 6103 284 186 32 186 chr17 14785547 14785703 -74718850 + L1MC5 LINE L1 7786 7917 -44 587 272 146 22 chr17 14786773 14787137 -74717416 - L1ME LINE L1 -365 5756 5348 799 168 8 0 chr17 14787225 14787356 -74717197 - FLAM_A SINE Alu -1 132 1 441 317 95 35 chr17 14787677 14788015 -74716538 - L1ME LINE L1 -1301 4845 4488 434 269 65 104 chr17 14788080 14788389 -74716164 + MLT1J2 LTR MaLR 85 422 -28 2317 153 37 58 chr17 14788790 14789305 -74715248 + MLT1D LTR MaLR 1 504 -1 185 359 80 33 chr17 14789312 14789524 -74715029 + MIR SINE MIR 36 257 -5 551 270 53 53 chr17 14789538 14789764 -74714789 - MIR SINE MIR -29 233 8 202 0 29 57 chr17 14790304 14790339 -74714214 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 300 257 136 7 chr17 14790996 14791136 -74713417 - HAL1b LINE L1 -718 630 473 237 289 31 126 chr17 14791358 14791412 -74713141 + MIR SINE MIR 47 105 -157 1027 191 130 77 chr17 14791412 14791482 -74713071 + MLT1C LTR MaLR 2 67 -400 1827 176 3 3 chr17 14791482 14791794 -74712759 - AluJo SINE Alu 0 312 1 1027 191 130 77 chr17 14791794 14792162 -74712391 + MLT1C LTR MaLR 67 463 -4 237 289 31 126 chr17 14792162 14792266 -74712287 + MIR SINE MIR 105 190 -72 184 265 15 73 chr17 14792471 14792539 -74712014 - MER5A DNA MER1_type -45 144 81 355 305 42 42 chr17 14792831 14792949 -74711604 + MIR SINE MIR 16 133 -129 240 152 0 0 chr17 14792949 14792995 -74711558 - Alu SINE Alu -1 299 254 465 97 0 0 chr17 14792995 14793057 -74711496 - Alu SINE Alu -249 62 1 2090 90 0 0 chr17 14793271 14793538 -74711015 + AluY SINE Alu 37 303 -8 568 320 29 39 chr17 14794363 14794744 -74709809 - MLT1L LTR MaLR -112 503 127 917 192 210 0 chr17 14795387 14795678 -74708875 + LTR50 LTR ERVL 444 795 0 22 35 0 0 chr17 14796461 14796490 -74708063 + AT_rich Low_complexity Low_complexity 1 29 0 600 206 103 3 chr17 14796783 14797057 -74707496 - MLT1J LTR MaLR -27 484 93 4194 170 15 19 chr17 14797168 14798021 -74706532 - L1MB8 LINE L1 -6 6172 5323 1929 178 0 3 chr17 14798408 14798717 -74705836 + AluJo SINE Alu 1 308 -4 261 256 12 37 chr17 14799098 14799180 -74705373 + MIR3 SINE MIR 94 173 -35 2243 105 0 0 chr17 14799635 14799931 -74704622 - AluSx SINE Alu -16 296 1 340 270 73 79 chr17 14800167 14800345 -74704208 - MER5B DNA MER1_type 0 178 2 294 327 71 9 chr17 14800402 14800515 -74704038 + MIR SINE MIR 5 124 -138 1699 46 0 9 chr17 14800682 14800901 -74703652 - L1PA5 LINE L1 0 6154 5938 351 303 48 28 chr17 14801422 14801567 -74702986 - MIR SINE MIR -69 193 46 1934 119 26 13 chr17 14801781 14802083 -74702470 - AluJo SINE Alu -6 306 1 760 289 45 28 chr17 14803101 14803392 -74701161 + L2 LINE L2 3015 3310 -3 436 234 0 11 chr17 14803654 14803748 -74700805 + MIR3 SINE MIR 82 174 -34 2099 118 0 56 chr17 14804468 14804790 -74699763 + AluSx SINE Alu 1 304 -8 2179 121 0 0 chr17 14805087 14805384 -74699169 - AluSq SINE Alu -13 300 4 626 85 24 0 chr17 14805390 14805472 -74699081 - AluSq/x SINE Alu -179 133 50 223 302 62 83 chr17 14806010 14806202 -74698351 - L2 LINE L2 -629 2685 2498 279 293 34 100 chr17 14808249 14808482 -74696071 + MIR SINE MIR 20 235 -27 2434 69 0 7 chr17 14808575 14808879 -74695674 + AluY SINE Alu 1 302 -9 1367 155 159 7 chr17 14808970 14809241 -74695312 - AluJb SINE Alu 0 312 1 182 250 0 83 chr17 14810474 14810534 -74694019 - MIR SINE MIR -65 197 143 189 0 0 0 chr17 14810789 14810810 -74693743 + (T)n Simple_repeat Simple_repeat 1 21 0 606 274 114 20 chr17 14811894 14812095 -74692458 + MIR SINE MIR 22 241 -21 252 86 0 0 chr17 14812711 14812746 -74691807 + (TATG)n Simple_repeat Simple_repeat 2 36 0 431 276 91 10 chr17 14812813 14813077 -74691476 - L1ME LINE L1 -312 5809 5521 2431 61 34 0 chr17 14813082 14813379 -74691174 - AluY SINE Alu -4 307 1 186 43 0 0 chr17 14813684 14813707 -74690846 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 717 186 106 6 chr17 14813922 14814083 -74690470 + MER58A DNA MER1_type 44 220 -4 210 174 0 0 chr17 14814185 14814231 -74690322 + GA-rich Low_complexity Low_complexity 1 46 0 899 231 49 0 chr17 14814411 14814614 -74689939 + MIR SINE MIR 19 231 -31 575 319 80 37 chr17 14814712 14815248 -74689305 - L2 LINE L2 -863 2451 1893 28 48 0 0 chr17 14815307 14815349 -74689204 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr17 14815545 14815570 -74688983 + AT_rich Low_complexity Low_complexity 1 25 0 485 315 11 16 chr17 14815602 14815786 -74688767 - MER5A DNA MER1_type 0 189 7 311 260 29 29 chr17 14817163 14817336 -74687217 - L1ME4a LINE L1 -5 6116 5944 2316 92 7 0 chr17 14817531 14817826 -74686727 - AluSq SINE Alu -16 297 1 742 234 77 30 chr17 14817888 14818123 -74686430 + MIR SINE MIR 17 262 0 372 296 26 0 chr17 14818138 14818413 -74686140 - L1MC4a LINE L1 -302 5819 5664 429 290 124 19 chr17 14818444 14818703 -74685850 - L1ME4a LINE L1 -299 5822 5537 405 281 120 20 chr17 14818706 14819032 -74685521 - L1ME4a LINE L1 -657 5513 5161 35 41 0 0 chr17 14819136 14819185 -74685368 + AT_rich Low_complexity Low_complexity 1 49 0 323 309 32 32 chr17 14819950 14820076 -74684477 - L2 LINE L2 -5 3308 3183 477 219 35 9 chr17 14820270 14820384 -74684169 + L2 LINE L2 3194 3310 -3 292 312 70 67 chr17 14821548 14821907 -74682646 - MLT1J LTR MaLR -36 475 116 295 264 116 31 chr17 14822581 14822710 -74681843 - MER5A DNA MER1_type -1 188 49 191 306 65 65 chr17 14822607 14822731 -74681822 + MER5A DNA MER1_type 48 171 -18 * 21 0 0 0 chr17 14823308 14823329 -74681224 + AT_rich Low_complexity Low_complexity 1 21 0 632 340 45 47 chr17 14823472 14823831 -74680722 + L2 LINE L2 2914 3271 -1 806 180 0 37 chr17 14826773 14826934 -74677619 + FRAM SINE Alu 1 155 -21 225 179 30 15 chr17 14827139 14827206 -74677347 + (TA)n Simple_repeat Simple_repeat 1 68 0 217 255 0 0 chr17 14827671 14827722 -74676831 - MIR SINE MIR -15 247 197 656 333 123 12 chr17 14827727 14828126 -74676427 + L3 LINE CR1 1116 1558 -19 285 341 88 0 chr17 14828193 14828375 -74676178 + L2 LINE L2 2508 2705 -609 1381 213 22 6 chr17 14828396 14828710 -74675843 - MLT1E3 LTR MaLR -2 622 304 2321 144 81 0 chr17 14828786 14829181 -74675372 - MSTC LTR MaLR 0 428 2 1775 171 23 0 chr17 14829231 14829535 -74675018 - AluJo SINE Alu 0 312 2 216 0 0 0 chr17 14829545 14829569 -74674984 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1057 159 26 10 chr17 14830749 14830944 -74673609 + MER2 DNA MER2_type 140 337 -8 184 214 24 0 chr17 14832051 14832093 -74672460 + MER5A DNA MER1_type 147 189 0 180 323 91 51 chr17 14832542 14832818 -74671735 + L2 LINE L2 2156 2442 -872 565 338 169 18 chr17 14833160 14833721 -74670832 - L2 LINE L2 -32 3240 2545 1117 187 48 5 chr17 14833721 14833930 -74670623 - MER20 DNA MER1_type -1 218 1 565 338 169 18 chr17 14833930 14834076 -74670477 - L2 LINE L2 -727 2545 2422 205 266 38 63 chr17 14834639 14834718 -74669835 + L2 LINE L2 3196 3272 0 31 58 0 0 chr17 14837478 14837530 -74667023 + AT_rich Low_complexity Low_complexity 1 52 0 323 296 26 0 chr17 14838078 14838193 -74666360 - L1ME4a LINE L1 -273 5848 5731 230 286 0 0 chr17 14838203 14838259 -74666294 - L1ME4a LINE L1 -444 5677 5622 273 316 82 0 chr17 14838561 14838659 -74665894 - L2 LINE L2 -12 3301 3196 * 473 273 68 70 chr17 14838652 14838874 -74665679 - L1ME4a LINE L1 -89 6032 5810 2100 126 0 10 chr17 14838874 14839183 -74665370 - AluSq SINE Alu -7 306 1 473 273 68 70 chr17 14839183 14839360 -74665193 - L1ME4a LINE L1 -311 5810 5634 304 293 36 50 chr17 14839563 14839703 -74664850 - L1ME4a LINE L1 -897 5436 5299 781 249 34 10 chr17 14839860 14840069 -74664484 - MER20 DNA MER1_type -5 214 1 371 181 219 0 chr17 14840190 14840295 -74664258 - MER94 DNA DNA 0 134 7 192 77 0 0 chr17 14840384 14840410 -74664143 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 239 0 32 0 chr17 14840537 14840568 -74663985 + (CA)n Simple_repeat Simple_repeat 2 33 0 536 321 30 0 chr17 14840693 14840861 -74663692 - L3 LINE CR1 -143 1434 1262 234 230 0 95 chr17 14841093 14841167 -74663386 - MIR SINE MIR -10 252 186 250 188 0 31 chr17 14843095 14843159 -74661394 + (TATG)n Simple_repeat Simple_repeat 2 63 0 268 321 43 51 chr17 14845607 14845850 -74658703 - L2 LINE L2 -294 2978 2735 223 361 83 0 chr17 14845861 14845969 -74658584 + L2 LINE L2 2746 2862 -452 180 231 0 0 chr17 14847230 14847282 -74657271 + T-rich Low_complexity Low_complexity 6 57 0 245 260 0 0 chr17 14847923 14847973 -74656580 + L2 LINE L2 3222 3271 -1 3672 162 30 3 chr17 14848208 14848881 -74655672 + L1PB4 LINE L1 5453 6143 -13 580 172 52 0 chr17 14849066 14849182 -74655371 + Tigger7 DNA MER2_type 17 138 -567 1144 263 80 62 chr17 14849265 14849521 -74655032 + L2 LINE L2 2250 2500 -814 198 0 0 0 chr17 14849521 14849543 -74655010 + (CA)n Simple_repeat Simple_repeat 2 23 0 1144 263 80 62 chr17 14849543 14849784 -74654769 + L2 LINE L2 2500 2756 -558 3454 157 57 72 chr17 14850387 14851184 -74653369 - LTR1 LTR ERV1 0 785 1 1251 320 159 27 chr17 14852218 14853485 -74651068 - L2 LINE L2 0 3272 1851 460 171 76 38 chr17 14854381 14854486 -74650067 + MIR SINE MIR 56 164 -98 193 288 180 36 chr17 14856021 14856132 -74648421 - MIR3 SINE MIR -70 138 12 402 21 0 0 chr17 14860785 14860832 -74643721 + (TG)n Simple_repeat Simple_repeat 1 47 0 2040 109 7 10 chr17 14861708 14862012 -74642541 - AluSx SINE Alu -9 303 1 22 0 0 0 chr17 14862012 14862034 -74642519 + AT_rich Low_complexity Low_complexity 1 22 0 30 69 0 0 chr17 14862153 14862211 -74642342 + AT_rich Low_complexity Low_complexity 1 58 0 293 320 87 23 chr17 14863305 14863477 -74641076 + MIR SINE MIR 6 188 -74 27 0 0 0 chr17 14864317 14864344 -74640209 + AT_rich Low_complexity Low_complexity 1 27 0 35 78 0 0 chr17 14865382 14865459 -74639094 + AT_rich Low_complexity Low_complexity 1 77 0 22 0 0 0 chr17 14865688 14865710 -74638843 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr17 14866251 14866284 -74638269 + AT_rich Low_complexity Low_complexity 1 33 0 866 137 13 13 chr17 14867651 14867804 -74636749 - L1MD1 LINE L1 0 6242 6090 21 0 0 0 chr17 14868158 14868179 -74636374 + AT_rich Low_complexity Low_complexity 1 21 0 571 263 21 21 chr17 14868269 14868455 -74636098 - MER5A DNA MER1_type -2 187 2 489 269 71 34 chr17 14869933 14870171 -74634382 + L1ME4a LINE L1 5487 5733 -388 330 287 88 29 chr17 14870175 14870311 -74634242 + L1ME4a LINE L1 5770 5913 -208 189 0 0 0 chr17 14870817 14870838 -74633715 + (T)n Simple_repeat Simple_repeat 1 21 0 303 253 72 72 chr17 14871046 14871240 -74633313 - L1ME4a LINE L1 -195 5926 5733 754 219 96 14 chr17 14871779 14871998 -74632555 + MIR SINE MIR 13 249 -13 323 268 126 65 chr17 14873169 14873400 -74631153 - L1ME4a LINE L1 -249 5872 5628 1792 143 37 3 chr17 14874124 14874424 -74630129 + AluJo SINE Alu 1 310 -2 22 35 0 0 chr17 14876109 14876138 -74628415 + AT_rich Low_complexity Low_complexity 1 29 0 198 103 0 0 chr17 14877656 14877685 -74626868 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 738 352 52 28 chr17 14878328 14878754 -74625799 - L2 LINE L2 -352 2962 2527 7317 111 20 20 chr17 14878951 14880649 -74623904 + L1MA2 LINE L1 4609 6304 0 266 180 16 16 chr17 14880737 14880798 -74623755 - L1ME4a LINE L1 -96 6025 5965 360 199 46 26 chr17 14881758 14881909 -74622644 + (TATAA)n Simple_repeat Simple_repeat 5 158 0 633 292 93 19 chr17 14882492 14882749 -74621804 + MLT1K LTR MaLR 313 588 0 1936 145 3 7 chr17 14882855 14883158 -74621395 + AluJb SINE Alu 1 302 -10 432 0 0 0 chr17 14884393 14884441 -74620112 + (CA)n Simple_repeat Simple_repeat 2 49 0 21 57 0 0 chr17 14884728 14884763 -74619790 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr17 14884798 14884820 -74619733 + AT_rich Low_complexity Low_complexity 1 22 0 1536 249 74 75 chr17 14884979 14885036 -74619517 - MLT2F LTR ERVL 0 663 607 1955 135 39 39 chr17 14885036 14885400 -74619153 - THE1B LTR MaLR 0 364 1 1536 249 74 75 chr17 14885400 14886004 -74618549 - MLT2F LTR ERVL -56 607 3 920 287 68 24 chr17 14886038 14886463 -74618090 - ERVL-F LTR ERVL -43 5721 5278 1735 229 48 81 chr17 14886493 14887184 -74617369 + L1ME1 LINE L1 5512 6334 0 327 353 61 49 chr17 14887918 14888264 -74616289 - L2 LINE L2 -716 2598 2249 2501 84 0 0 chr17 14888300 14888611 -74615942 + AluY SINE Alu 1 311 0 225 246 0 0 chr17 14888692 14888749 -74615804 + L2 LINE L2 2554 2610 -704 377 292 154 60 chr17 14888936 14889101 -74615452 - MIR SINE MIR -6 256 61 2204 72 10 17 chr17 14889101 14889394 -74615159 - AluY SINE Alu -20 291 1 377 292 154 60 chr17 14889394 14889461 -74615092 - MIR SINE MIR -201 61 2 245 296 63 144 chr17 14889495 14889764 -74614789 + L2 LINE L2 2920 3150 -122 1597 190 55 15 chr17 14889764 14890091 -74614462 - MER58B DNA MER1_type -1 340 1 245 296 63 144 chr17 14890091 14890203 -74614350 + L2 LINE L2 3150 3270 -2 324 288 163 12 chr17 14890304 14890464 -74614089 + L1ME LINE L1 5636 5819 -302 411 255 0 0 chr17 14891518 14891616 -74612937 + MER103 DNA DNA 2 99 -67 415 280 72 8 chr17 14891946 14892071 -74612482 + MER94 DNA DNA 1 133 -1 1032 209 67 27 chr17 14892253 14892478 -74612075 - MER8 DNA MER2_type 0 239 6 189 94 0 0 chr17 14892563 14892595 -74611958 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 16426 133 17 19 chr17 14894111 14896103 -74608450 + Ricksha DNA DNA 133 2167 -1079 2085 103 7 7 chr17 14896103 14896422 -74608131 - AluSx SINE Alu 0 319 1 16426 133 17 19 chr17 14896422 14897490 -74607063 + Ricksha DNA DNA 2167 3236 -10 414 208 119 0 chr17 14897810 14897911 -74606642 - MER94 DNA DNA -19 115 3 13181 129 27 8 chr17 14898062 14899479 -74605074 + Tigger1 DNA MER2_type 1 1470 -948 2013 75 13 79 chr17 14899479 14899784 -74604769 - AluSg SINE Alu -9 301 17 13181 129 27 8 chr17 14899784 14900372 -74604181 + Tigger1 DNA MER2_type 1470 2045 -373 1960 149 58 25 chr17 14900383 14900746 -74603807 - THE1C LTR MaLR 0 375 1 10556 115 21 45 chr17 14900746 14902362 -74602191 - THE1C-int LTR MaLR 0 1580 3 726 124 9 0 chr17 14902364 14902469 -74602084 - THE1C LTR MaLR 0 375 270 2780 153 32 0 chr17 14902637 14903074 -74601479 + MSTB2 LTR MaLR 3 453 -4 1728 179 7 10 chr17 14903400 14903697 -74600856 + AluJo SINE Alu 1 296 -16 411 333 57 50 chr17 14904211 14904490 -74600063 - L2 LINE L2 -5 3267 2987 180 335 165 32 chr17 14904505 14904997 -74599556 + L2 LINE L2 2134 2690 -624 2306 140 8 21 chr17 14905049 14905435 -74599118 - L1P5 LINE L1 -424 5732 5352 1360 194 99 0 chr17 14905435 14905719 -74598834 - AluJb SINE Alu 0 312 1 877 113 0 0 chr17 14905734 14905849 -74598704 - FLAM_C SINE Alu -18 125 11 586 118 41 84 chr17 14905850 14905991 -74598562 - L1 LINE L1 -780 5366 5232 289 185 19 0 chr17 14906015 14906069 -74598484 - L2 LINE L2 -68 3245 3191 787 237 58 10 chr17 14906547 14906754 -74597799 + L1ME1 LINE L1 4112 4328 -1818 3051 212 76 37 chr17 14906801 14907044 -74597509 + L1ME1 LINE L1 5073 5305 -861 1825 154 20 10 chr17 14907044 14907342 -74597211 + AluJo SINE Alu 1 301 -11 3051 212 76 37 chr17 14907342 14908135 -74596418 + L1ME1 LINE L1 5305 6150 -16 492 260 64 35 chr17 14908183 14908356 -74596197 + MIR SINE MIR 6 183 -79 301 329 206 26 chr17 14908431 14909010 -74595543 - L2 LINE L2 -24 3248 2561 180 164 18 91 chr17 14912380 14912435 -74592118 + L2 LINE L2 3222 3272 0 273 286 20 51 chr17 14913967 14914065 -74590488 - L2 LINE L2 -221 3051 2957 21 0 0 0 chr17 14914980 14915001 -74589552 + AT_rich Low_complexity Low_complexity 1 21 0 467 229 12 0 chr17 14915014 14915097 -74589456 + 7SLRNA srpRNA srpRNA 1 84 -236 423 0 0 0 chr17 14915126 14915173 -74589380 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 21 36 0 0 chr17 14915271 14915299 -74589254 + AT_rich Low_complexity Low_complexity 1 28 0 195 282 247 0 chr17 14916717 14916802 -74587751 + L2 LINE L2 3123 3228 -44 198 0 0 0 chr17 14916823 14916845 -74587708 + (TGAA)n Simple_repeat Simple_repeat 3 24 0 487 223 108 57 chr17 14916854 14917011 -74587542 - MIR SINE MIR -28 234 70 408 323 62 0 chr17 14917110 14917240 -74587313 - MIR3 SINE MIR -69 139 2 346 103 138 0 chr17 14917756 14917814 -74586739 - MER5A DNA MER1_type -120 69 4 26 64 0 0 chr17 14918005 14918052 -74586501 + AT_rich Low_complexity Low_complexity 1 47 0 485 298 135 34 chr17 14919009 14919501 -74585052 + L2 LINE L2 2652 3200 -72 211 220 20 20 chr17 14919767 14919817 -74584736 + MIR SINE MIR 97 146 -62 1010 279 33 42 chr17 14919938 14920396 -74584157 + L1ME4a LINE L1 5486 5939 -182 189 107 0 0 chr17 14920960 14920988 -74583565 + (T)n Simple_repeat Simple_repeat 1 28 0 9243 101 18 23 chr17 14921292 14922600 -74581953 - HSMAR2 DNA Mariner -1 1301 1 206 290 245 7 chr17 14924476 14924631 -74579922 - MIR SINE MIR -63 199 8 506 293 79 13 chr17 14926039 14926268 -74578285 + MIR SINE MIR 2 245 -17 2423 61 0 3 chr17 14927298 14927591 -74576962 - AluSc SINE Alu -17 292 1 941 216 50 0 chr17 14928226 14928425 -74576128 - MER3 DNA MER1_type 0 209 1 1165 183 5 0 chr17 14928532 14928718 -74575835 - MER5A DNA MER1_type 0 189 3 290 313 114 68 chr17 14929032 14929400 -74575153 - L2 LINE L2 -5 3267 2883 336 151 0 0 chr17 14931625 14931678 -74572875 - L2 LINE L2 0 3313 3261 411 311 72 50 chr17 14933736 14933916 -74570637 + L2 LINE L2 3007 3190 -82 1068 167 61 10 chr17 14935090 14935288 -74569265 - AluJo SINE Alu -13 299 92 228 237 226 0 chr17 14935366 14935459 -74569094 + MIR SINE MIR 125 238 -24 194 298 0 0 chr17 14935463 14935520 -74569033 + L2 LINE L2 2301 2357 -957 247 284 110 0 chr17 14935743 14935852 -74568701 + L2 LINE L2 2959 3079 -234 33 56 0 0 chr17 14936087 14936141 -74568412 + AT_rich Low_complexity Low_complexity 1 54 0 428 350 63 19 chr17 14937163 14937526 -74567027 + L2 LINE L2 2301 2679 -635 216 264 0 0 chr17 14937567 14937620 -74566933 + (CA)n Simple_repeat Simple_repeat 2 54 0 1539 165 4 23 chr17 14937686 14937947 -74566606 + AluJo SINE Alu 1 256 -56 454 309 77 82 chr17 14938082 14938460 -74566093 + L2 LINE L2 2886 3261 -11 286 232 61 0 chr17 14939294 14939393 -74565160 + MER20B DNA MER1_type 53 157 -626 22 0 0 0 chr17 14940218 14940240 -74564313 + AT_rich Low_complexity Low_complexity 1 22 0 1327 191 70 30 chr17 14941662 14942033 -74562520 - L1MA7 LINE L1 0 6291 5906 2122 185 65 7 chr17 14942033 14942449 -74562104 - Tigger7 DNA MER2_type -2047 440 1 722 277 123 42 chr17 14942797 14943277 -74561276 + L2 LINE L2 2544 3147 -166 1884 70 25 0 chr17 14943277 14943518 -74561035 - AluSg/x SINE Alu 0 312 66 722 277 123 42 chr17 14943518 14943699 -74560854 + L2 LINE L2 3147 3312 -1 282 292 109 15 chr17 14943965 14944167 -74560386 + L2 LINE L2 3044 3264 -49 291 339 90 16 chr17 14945753 14946075 -74558478 - L2 LINE L2 -337 2977 2632 441 261 22 15 chr17 14946901 14947035 -74557518 - MLT1K LTR MaLR 0 588 454 383 208 0 13 chr17 14947118 14947195 -74557358 - L2 LINE L2 -32 3281 3206 228 195 0 0 chr17 14948615 14948656 -74555897 + L2 LINE L2 3257 3297 -16 192 317 69 41 chr17 14948676 14948821 -74555732 + L2 LINE L2 2934 3082 -190 997 241 92 15 chr17 14950196 14950532 -74554021 + MARNA DNA Mariner 77 438 -148 276 267 133 15 chr17 14950872 14951007 -74553546 - L1ME4a LINE L1 -5 6116 5966 900 282 115 6 chr17 14951261 14951601 -74552952 - L1MC4 LINE L1 -976 7066 6690 264 241 5 151 chr17 14952047 14952246 -74552307 - L1ME4a LINE L1 -406 5715 5546 2326 122 0 0 chr17 14952371 14952682 -74551871 - AluSq SINE Alu -2 311 1 2111 126 0 0 chr17 14952995 14953288 -74551265 - AluSx SINE Alu -19 293 1 1816 224 45 25 chr17 14954185 14954332 -74550221 - Charlie1b DNA MER1_type -2242 519 376 2213 101 0 14 chr17 14954332 14954628 -74549925 + AluSx SINE Alu 5 296 -16 1816 224 45 25 chr17 14954628 14954989 -74549564 - Charlie1b DNA MER1_type -2385 376 1 1392 276 128 36 chr17 14955157 14956131 -74548422 + L2 LINE L2 2256 3310 -3 686 230 132 62 chr17 14956257 14956321 -74548232 - MLT1K LTR MaLR -24 564 506 2153 99 44 3 chr17 14956321 14956615 -74547938 + AluSc SINE Alu 1 306 -3 686 230 132 62 chr17 14956615 14956807 -74547746 - MLT1K LTR MaLR -82 506 290 465 288 36 36 chr17 14956826 14957048 -74547505 - L1MC4a LINE L1 -1146 6662 6441 207 398 11 0 chr17 14957681 14957774 -74546779 + L2 LINE L2 114 207 -3107 203 348 22 0 chr17 14957876 14957965 -74546588 + L2 LINE L2 3223 3313 0 2069 119 3 14 chr17 14960060 14960354 -74544199 - AluSc SINE Alu -18 291 1 2187 105 0 52 chr17 14960811 14961135 -74543418 - AluSx SINE Alu -5 307 1 299 336 8 0 chr17 14962820 14962942 -74541611 + MER20B DNA MER1_type 33 155 -628 2699 175 26 16 chr17 14963212 14963231 -74541322 - Tigger7 DNA MER2_type -1970 517 500 2301 110 0 7 chr17 14963231 14963541 -74541012 - AluSc SINE Alu -1 308 1 2699 175 26 16 chr17 14963541 14963697 -74540856 - Tigger7 DNA MER2_type -1987 500 347 2342 136 5 19 chr17 14963697 14964065 -74540488 - THE1B LTR MaLR -1 363 1 2699 175 26 16 chr17 14964065 14964384 -74540169 - Tigger7 DNA MER2_type -2140 347 17 1657 241 107 44 chr17 14964414 14965116 -74539437 - L1MDa LINE L1 -2423 4117 3372 1358 183 67 38 chr17 14965118 14965713 -74538840 - L1MDa LINE L1 -3580 2960 2350 340 244 0 22 chr17 14967800 14967890 -74536663 + MER89-int LTR ERV1 1270 1357 -5444 1596 196 63 9 chr17 14967902 14968233 -74536320 + MLT1A1 LTR MaLR 13 361 -4 1032 255 34 17 chr17 14968242 14968536 -74536017 + MER89-int LTR ERV1 1361 1659 -5142 728 178 0 0 chr17 14970488 14970606 -74533947 + AluJb SINE Alu 183 300 -12 2399 141 37 5 chr17 14970608 14971042 -74533511 - Tigger3b DNA MER2_type -575 656 209 595 137 11 0 chr17 14971081 14971176 -74533377 + MER83 LTR ERV1 353 448 0 336 299 30 15 chr17 14972011 14972145 -74532408 - LTR37A LTR ERV1 -145 281 146 939 158 33 0 chr17 14972286 14972470 -74532083 + L1MA8 LINE L1 5858 6047 -244 1148 152 18 37 chr17 14972490 14972707 -74531846 + AluSg/x SINE Alu 83 295 -15 2216 97 24 0 chr17 14972879 14973169 -74531384 - AluSp SINE Alu -16 297 1 571 89 38 0 chr17 14973281 14973360 -74531193 - AluY SINE Alu -228 83 2 486 264 67 63 chr17 14973669 14973953 -74530600 - L1ME2 LINE L1 -12 6152 5868 2523 66 0 0 chr17 14973957 14974259 -74530294 - AluY SINE Alu -9 302 1 380 294 186 14 chr17 14974320 14974599 -74529954 - L1MEd LINE L1 -1662 4467 4141 828 277 33 21 chr17 14974606 14974938 -74529615 - L1ME2 LINE L1 -1 6163 5828 1034 113 0 0 chr17 14974943 14975085 -74529468 - AluSg/x SINE Alu -1 311 170 638 173 8 23 chr17 14975088 14975221 -74529332 - L1ME2 LINE L1 -345 5821 5691 761 146 0 49 chr17 14975356 14975500 -74529053 - FLAM_C SINE Alu -1 142 6 1694 49 0 0 chr17 14975661 14975865 -74528688 - L1PA3 LINE L1 -3 6152 5949 729 266 94 63 chr17 14975865 14976031 -74528522 - L1MEd LINE L1 -2222 3907 3748 1143 153 19 14 chr17 14976031 14976246 -74528307 + L1PA16 LINE L1 5951 6166 0 729 266 94 63 chr17 14976246 14976970 -74527583 - L1MEd LINE L1 -2381 3748 2989 697 189 65 47 chr17 14976983 14977152 -74527401 - MER63A DNA MER1_type 0 210 39 325 272 142 18 chr17 14977273 14977442 -74527111 - L1MEd LINE L1 -3240 2889 2700 21 36 0 0 chr17 14977442 14977470 -74527083 + AT_rich Low_complexity Low_complexity 1 28 0 969 151 0 7 chr17 14977472 14977618 -74526935 - FAM SINE Alu -23 162 18 356 252 99 90 chr17 14977638 14977915 -74526638 - L1MEd LINE L1 -3423 2706 2433 2755 138 23 19 chr17 14977915 14978387 -74526166 - MER101 LTR ERV1 0 474 1 356 252 99 90 chr17 14978387 14978685 -74525868 - L1MEd LINE L1 -3696 2433 2126 689 288 162 48 chr17 14979177 14980200 -74524353 - L1MEd LINE L1 -865 1625 385 317 274 76 61 chr17 14980286 14980483 -74524070 - L1MEd LINE L1 -5918 201 2 2089 87 69 4 chr17 14981198 14981475 -74523078 - AluSg1 SINE Alu -14 295 1 647 162 176 28 chr17 14982077 14982219 -74522334 - FRAM SINE Alu -15 161 1 320 331 58 14 chr17 14982284 14982423 -74522130 - MIR SINE MIR -102 160 16 214 254 48 32 chr17 14982595 14982646 -74521907 + L2 LINE L2 3241 3295 -18 2228 109 0 19 chr17 14982646 14982957 -74521596 + AluSc SINE Alu 1 305 -4 214 254 48 32 chr17 14982957 14982968 -74521585 + L2 LINE L2 3295 3304 -9 1339 179 6 116 chr17 14983449 14983784 -74520769 - AluJb SINE Alu -4 298 1 774 229 143 73 chr17 14983795 14983987 -74520566 - HAL1 LINE L1 -5 2502 2325 369 43 0 0 chr17 14983987 14984034 -74520519 + (TG)n Simple_repeat Simple_repeat 2 48 0 1525 172 4 0 chr17 14984041 14984279 -74520274 - AluJb SINE Alu -31 281 43 774 229 143 73 chr17 14984279 14984568 -74519985 - HAL1 LINE L1 -187 2320 1979 516 279 107 30 chr17 14984644 14985009 -74519544 - L1ME4a LINE L1 -143 5978 5586 462 293 156 33 chr17 14985347 14985681 -74518872 - L2 LINE L2 -1 3312 2938 256 172 0 17 chr17 14985772 14985830 -74518723 + LTR28 LTR ERV1 1 57 -963 * 2398 156 117 5 chr17 14985801 14986230 -74518323 + MER61D LTR ERV1 25 501 0 1960 144 28 6 chr17 14986335 14986688 -74517865 + MER46B DNA MER2_type 1 236 0 225 0 0 0 chr17 14987095 14987120 -74517433 + (TG)n Simple_repeat Simple_repeat 1 25 0 752 262 49 65 chr17 14988222 14988607 -74515946 + L2 LINE L2 1441 1819 -1495 539 189 0 0 chr17 14988607 14988697 -74515856 - MLT1A2 LTR MaLR 0 390 301 232 250 0 0 chr17 14988722 14988774 -74515779 + L2 LINE L2 2503 2554 -760 706 204 105 135 chr17 14988776 14988924 -74515629 - MLT1A2 LTR MaLR -89 301 165 1397 152 122 26 chr17 14988924 14989194 -74515359 - AluJb SINE Alu -16 296 1 706 204 105 135 chr17 14989194 14989349 -74515204 - MLT1A2 LTR MaLR -225 165 7 2696 273 93 35 chr17 14989349 14989684 -74514869 + L2 LINE L2 1808 2122 -1191 1917 96 36 66 chr17 14989684 14989986 -74514567 - AluSq SINE Alu -8 305 13 2696 273 93 35 chr17 14989986 14990432 -74514121 + L2 LINE L2 2122 2541 -772 2370 110 0 0 chr17 14990432 14990742 -74513811 - AluSx SINE Alu -2 310 1 2696 273 93 35 chr17 14990742 14991399 -74513154 + L2 LINE L2 2541 3311 -2 1642 244 86 15 chr17 14991441 14991917 -74512636 - MLT1E LTR MaLR -2 591 82 276 196 0 0 chr17 14992052 14992098 -74512455 - MLT1I LTR MaLR -6 403 358 2087 118 3 3 chr17 14992109 14992414 -74512139 - AluSg SINE Alu -5 305 1 499 342 30 20 chr17 14992483 14992682 -74511871 - MLT1I LTR MaLR -79 330 130 1997 125 0 3 chr17 14993050 14993353 -74511200 - AluSc SINE Alu -7 302 1 562 215 22 22 chr17 14993922 14994057 -74510496 + MLT1L LTR MaLR 142 276 -339 318 229 83 0 chr17 14994170 14994266 -74510287 + MLT1L LTR MaLR 510 613 -2 1127 172 43 0 chr17 14994830 14995039 -74509514 - MER20 DNA MER1_type -1 218 1 865 279 111 19 chr17 14995175 14995608 -74508945 + MLT1K LTR MaLR 1 473 -3 611 253 5 11 chr17 14995648 14995838 -74508715 - L1MA4 LINE L1 -6 6294 6106 293 194 194 0 chr17 14995839 14995906 -74508647 - MLT2B2 LTR ERVL -408 107 28 1583 197 112 97 chr17 14996205 14996614 -74507939 + MLT2B2 LTR ERVL 1 402 -113 3795 140 24 16 chr17 14996614 14997248 -74507305 + L1PB4 LINE L1 5517 6155 -1 1583 197 112 97 chr17 14997248 14997296 -74507257 + MLT2B2 LTR ERVL 402 448 -67 207 0 0 0 chr17 14997296 14997319 -74507234 + (CA)n Simple_repeat Simple_repeat 2 24 0 1583 197 112 97 chr17 14997319 14997367 -74507186 + MLT2B2 LTR ERVL 448 515 0 292 208 71 91 chr17 14998216 14998370 -74506183 + MIR SINE MIR 2 152 -110 2954 202 69 84 chr17 14998425 14999297 -74505256 - MER21B LTR ERV1 -3 860 2 1094 204 56 111 chr17 14999870 15000194 -74504359 - MLT1D LTR MaLR 0 505 162 2030 112 0 0 chr17 15000201 15000479 -74504074 + AluSg SINE Alu 1 278 -32 1963 152 101 29 chr17 15000573 15000948 -74503605 + MSTB LTR MaLR 1 402 -24 292 235 163 0 chr17 15001021 15001119 -74503434 - MLT1D LTR MaLR -391 114 1 1264 207 52 83 chr17 15002327 15002780 -74501773 - MLT1C LTR MaLR 0 467 16 6208 201 47 37 chr17 15003999 15004719 -74499834 - L1MB4 LINE L1 0 6678 5966 2055 119 0 3 chr17 15004719 15005012 -74499541 + AluSq SINE Alu 1 292 -21 6208 201 47 37 chr17 15005012 15008160 -74496393 - L1MB4 LINE L1 -712 5966 2047 2045 130 0 0 chr17 15008160 15008461 -74496092 - AluSc SINE Alu -8 301 1 6208 201 47 37 chr17 15008461 15008686 -74495867 - L1MB4 LINE L1 -4631 2047 1826 2598 213 38 55 chr17 15008689 15009835 -74494718 - L1MB4 LINE L1 -4862 1680 583 281 341 9 33 chr17 15010125 15010339 -74494214 - L1MB4 LINE L1 -6320 222 14 1009 295 103 49 chr17 15010384 15010925 -74493628 - L2 LINE L2 -13 3300 2790 2222 72 0 56 chr17 15010925 15011246 -74493307 - AluY SINE Alu -8 303 1 1009 295 103 49 chr17 15011246 15011822 -74492731 - L2 LINE L2 -523 2790 2079 194 303 132 0 chr17 15012365 15012441 -74492112 + L2 LINE L2 3187 3272 0 2134 98 3 3 chr17 15012955 15013251 -74491302 + AluSc SINE Alu 1 296 -13 298 203 81 0 chr17 15013476 15013550 -74491003 + Charlie8 DNA MER1_type 92 171 -2246 252 276 69 0 chr17 15013970 15014057 -74490496 - MIR SINE MIR -109 153 61 2126 104 0 0 chr17 15014114 15014412 -74490141 + AluSx SINE Alu 1 298 -14 3621 180 19 22 chr17 15016117 15016445 -74488108 + L1MB2 LINE L1 5404 5731 -440 2132 63 0 88 chr17 15016445 15016776 -74487777 + AluY SINE Alu 1 302 -9 3621 180 19 22 chr17 15016776 15017164 -74487389 + L1MB2 LINE L1 5731 6118 -53 207 204 0 0 chr17 15017180 15017224 -74487329 + A-rich Low_complexity Low_complexity 1 44 0 522 147 343 28 chr17 15017233 15017376 -74487177 - MER5A DNA MER1_type -1 188 1 189 274 41 41 chr17 15017501 15017574 -74486979 - MIR SINE MIR -15 247 175 1257 328 127 33 chr17 15017626 15018582 -74485971 - L2 LINE L2 -117 3196 2331 1052 110 87 83 chr17 15018582 15018800 -74485753 - MER20 DNA MER1_type 0 219 1 1257 328 127 33 chr17 15018800 15018864 -74485689 - L2 LINE L2 -982 2331 2274 5417 134 22 43 chr17 15018864 15019551 -74485002 - MER49 LTR ERV1 0 923 223 1541 163 3 49 chr17 15019551 15019858 -74484695 - AluJo SINE Alu -19 293 1 5417 134 22 43 chr17 15019858 15019931 -74484622 - MER49 LTR ERV1 -700 223 150 1867 154 3 3 chr17 15019931 15020236 -74484317 + AluJb SINE Alu 1 305 -7 5417 134 22 43 chr17 15020236 15020417 -74484136 - MER49 LTR ERV1 -773 150 1 1257 328 127 33 chr17 15020417 15020555 -74483998 - L2 LINE L2 -1039 2274 1921 2131 108 3 0 chr17 15021137 15021443 -74483110 - AluSp SINE Alu -6 307 1 532 345 99 30 chr17 15021533 15021895 -74482658 + HAL1 LINE L1 1112 1498 -1009 303 216 224 0 chr17 15021995 15022101 -74482452 - MLT1H1 LTR MaLR 0 555 421 241 235 0 0 chr17 15022283 15022334 -74482219 - MLT1I LTR MaLR -266 143 93 362 271 118 65 chr17 15022359 15022621 -74481932 + L1M4c LINE L1 2117 2392 -3992 1576 166 21 14 chr17 15022670 15022992 -74481561 + AluJo SINE Alu 1 324 0 23 0 0 0 chr17 15023126 15023149 -74481404 + AT_rich Low_complexity Low_complexity 1 23 0 4290 137 95 16 chr17 15023162 15023585 -74480968 + L1MC2 LINE L1 5485 5873 -471 1139 206 56 80 chr17 15023585 15023959 -74480594 - MLT1A1 LTR MaLR 0 365 1 4290 137 95 16 chr17 15023959 15024241 -74480312 + L1MC2 LINE L1 5873 6131 -213 255 79 0 0 chr17 15024241 15024279 -74480274 + (TG)n Simple_repeat Simple_repeat 1 38 0 * 342 0 0 0 chr17 15024278 15024316 -74480237 + (GA)n Simple_repeat Simple_repeat 1 38 0 4290 137 95 16 chr17 15024279 15024316 -74480237 + L1MC2 LINE L1 6131 6164 -180 1714 142 91 34 chr17 15024316 15024668 -74479885 + THE1C LTR MaLR 4 375 0 417 54 0 0 chr17 15024668 15024724 -74479829 + (TG)n Simple_repeat Simple_repeat 2 57 0 4290 137 95 16 chr17 15024724 15024801 -74479752 + L1MC2 LINE L1 6163 6332 -12 1752 158 74 6 chr17 15025165 15025416 -74479137 - MER7A DNA MER2_type -2693 345 68 3437 57 0 0 chr17 15025416 15025839 -74478714 - L1PA5 LINE L1 -2 6152 5730 1752 158 74 6 chr17 15025839 15025910 -74478643 - MER7A DNA MER2_type -2970 68 3 1821 148 7 3 chr17 15026390 15026687 -74477866 + AluJo SINE Alu 5 302 -10 634 277 88 56 chr17 15027053 15027564 -74476989 + HAL1b LINE L1 429 961 -387 2231 82 3 3 chr17 15027564 15027867 -74476686 - AluSc SINE Alu -6 303 1 634 277 88 56 chr17 15027867 15027911 -74476642 + HAL1b LINE L1 961 1002 -346 225 0 0 0 chr17 15028419 15028444 -74476109 + (A)n Simple_repeat Simple_repeat 1 25 0 733 249 161 42 chr17 15028492 15028846 -74475707 - LTR16A LTR ERVL -3 447 52 200 316 160 47 chr17 15029096 15029352 -74475201 - L2 LINE L2 -1980 1334 1050 326 239 160 41 chr17 15029446 15029739 -74474814 - LTR33 LTR ERVL 0 521 194 233 333 133 8 chr17 15030710 15030830 -74473723 - MIR3 SINE MIR -6 202 68 378 0 0 0 chr17 15033300 15033342 -74471211 + (CA)n Simple_repeat Simple_repeat 2 43 0 23 0 0 0 chr17 15034447 15034470 -74470083 + GC_rich Low_complexity Low_complexity 1 23 0 28 61 0 0 chr17 15035532 15035581 -74468972 + GC_rich Low_complexity Low_complexity 1 49 0 211 259 19 0 chr17 15036391 15036445 -74468108 + MIR SINE MIR 12 66 -196 1035 216 82 9 chr17 15038648 15038879 -74465674 - MIR SINE MIR -5 257 10 21 36 0 0 chr17 15040277 15040305 -74464248 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 15040422 15040443 -74464110 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr17 15041114 15041143 -74463410 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr17 15042416 15042440 -74462113 + GC_rich Low_complexity Low_complexity 1 24 0 1417 122 94 73 chr17 15043957 15044245 -74460308 - AluJo SINE Alu -18 294 1 1548 182 35 10 chr17 15044246 15044559 -74459994 - L1MC1 LINE L1 -9 6324 6004 265 241 188 80 chr17 15045033 15045145 -74459408 - MIR SINE MIR -70 192 69 1188 117 0 11 chr17 15045768 15045947 -74458606 - AluSg SINE Alu -9 303 127 308 127 18 0 chr17 15045947 15046002 -74458551 + (TG)n Simple_repeat Simple_repeat 2 57 0 992 94 0 0 chr17 15046007 15046134 -74458419 - AluSg SINE Alu -183 127 1 2210 94 3 0 chr17 15046437 15046736 -74457817 - AluSq SINE Alu -13 300 1 2351 77 3 0 chr17 15046835 15047145 -74457408 - AluSp SINE Alu -2 311 1 824 225 50 46 chr17 15047156 15047418 -74457135 - L1ME3A LINE L1 -2 6168 5906 407 306 62 0 chr17 15047425 15047569 -74456984 + Charlie8 DNA MER1_type 54 206 -2211 304 202 182 10 chr17 15048269 15048368 -74456185 - MER5C DNA MER1_type -200 124 9 2192 99 7 0 chr17 15048409 15048702 -74455851 + AluSq SINE Alu 3 297 -16 227 182 0 23 chr17 15048733 15048777 -74455776 - MER103 DNA DNA -67 99 57 342 272 67 124 chr17 15052393 15052649 -74451904 - L2 LINE L2 -19 3294 3054 1410 67 52 5 chr17 15052649 15052843 -74451710 - L1PB1 LINE L1 0 6151 5949 342 272 67 124 chr17 15052843 15052869 -74451684 - L2 LINE L2 -259 3054 3028 229 301 57 49 chr17 15052913 15053036 -74451517 - L2 LINE L2 -552 2762 2639 228 274 91 35 chr17 15053149 15053346 -74451207 - L2 LINE L2 -222 3050 2843 303 93 0 0 chr17 15054809 15054852 -74449701 + (CAT)n Simple_repeat Simple_repeat 1 43 0 21 0 0 0 chr17 15054854 15054875 -74449678 + AT_rich Low_complexity Low_complexity 1 21 0 276 329 2 30 chr17 15055068 15055220 -74449333 + MIR SINE MIR 3 147 -61 2280 94 0 7 chr17 15055765 15056072 -74448481 - AluSg SINE Alu -5 305 1 616 164 0 9 chr17 15057274 15057384 -74447169 - FLAM_A SINE Alu -1 141 33 1653 166 7 7 chr17 15057493 15057770 -74446783 - AluJo SINE Alu -25 287 11 1320 204 57 52 chr17 15058108 15058515 -74446038 - LTR37A LTR ERV1 0 426 18 315 161 0 0 chr17 15058872 15058928 -74445625 + (TG)n Simple_repeat Simple_repeat 1 56 0 197 32 0 32 chr17 15059357 15059388 -74445165 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 2305 84 0 7 chr17 15059506 15059816 -74444737 + AluSq SINE Alu 4 311 -2 195 245 57 0 chr17 15060619 15060672 -74443881 - L2 LINE L2 0 3272 3217 759 181 0 21 chr17 15061586 15061730 -74442823 + FLAM_C SINE Alu 3 143 0 936 136 0 27 chr17 15062160 15062344 -74442209 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 309 276 67 0 chr17 15062344 15062449 -74442104 + L1M4 LINE L1 3073 3184 -2962 335 141 90 13 chr17 15062868 15062946 -74441607 - MIR SINE MIR -99 163 80 305 293 126 17 chr17 15063195 15063369 -74441184 - MIR3 SINE MIR -11 197 5 306 0 0 0 chr17 15063417 15063451 -74441102 + (TG)n Simple_repeat Simple_repeat 2 35 0 234 62 0 0 chr17 15065689 15065721 -74438832 + (T)n Simple_repeat Simple_repeat 1 32 0 2156 88 0 7 chr17 15066052 15066357 -74438196 + AluSg SINE Alu 1 303 -7 1115 161 39 222 chr17 15066357 15066686 -74437867 - MER31A LTR ERV1 -43 423 220 1724 83 29 4 chr17 15066686 15066927 -74437626 - AluSp SINE Alu -66 247 1 1115 161 39 222 chr17 15066927 15067111 -74437442 - MER31A LTR ERV1 -246 220 4 1649 168 43 40 chr17 15067143 15067212 -74437341 - L1MC1 LINE L1 0 6333 6266 752 207 35 12 chr17 15067212 15067381 -74437172 - FAM SINE Alu -2 173 1 1649 168 43 40 chr17 15067381 15067663 -74436890 - L1MC1 LINE L1 -67 6266 5981 260 108 0 0 chr17 15068021 15068058 -74436495 - MIR SINE MIR -63 145 109 259 150 0 0 chr17 15068140 15068180 -74436373 - MIR SINE MIR -63 145 106 2147 109 3 0 chr17 15068279 15068582 -74435971 + AluSx SINE Alu 1 304 -8 522 199 45 58 chr17 15068702 15068858 -74435695 + L1ME1 LINE L1 6011 6164 -2 191 146 24 0 chr17 15069681 15069722 -74434831 + CT-rich Low_complexity Low_complexity 1 42 0 829 157 27 0 chr17 15069722 15069869 -74434684 - MSTC LTR MaLR -50 378 228 1973 115 3 33 chr17 15070199 15070503 -74434050 - AluSx SINE Alu -17 295 1 392 261 106 37 chr17 15070816 15070977 -74433576 - MER5B DNA MER1_type -1 177 6 2008 115 3 3 chr17 15071004 15071290 -74433263 - AluSc SINE Alu -23 286 1 2036 138 0 0 chr17 15071298 15071609 -74432944 - AluSp SINE Alu -2 311 1 245 301 29 48 chr17 15072372 15072502 -74432051 + MIR SINE MIR 40 170 -72 2589 147 40 27 chr17 15072993 15073449 -74431104 + MER31A LTR ERV1 3 467 -18 2260 97 0 0 chr17 15073449 15073749 -74430804 - AluSx SINE Alu -12 300 1 2589 147 40 27 chr17 15073749 15073769 -74430784 + MER31A LTR ERV1 467 485 0 566 291 64 43 chr17 15074298 15074532 -74430021 - MIR SINE MIR -1 261 23 184 289 0 22 chr17 15075197 15075242 -74429311 + L2 LINE L2 3210 3253 -19 762 317 33 12 chr17 15075428 15075671 -74428882 - MIR SINE MIR 0 262 15 3262 167 4 51 chr17 15075754 15075828 -74428725 - L1MA7 LINE L1 -21 6270 6194 2351 78 0 3 chr17 15075828 15076135 -74428418 + AluSc SINE Alu 1 306 -3 3262 167 4 51 chr17 15076135 15076743 -74427810 - L1MA7 LINE L1 -97 6194 5620 1947 129 0 10 chr17 15076756 15077066 -74427487 - AluSq SINE Alu -6 307 1 500 184 7 52 chr17 15077107 15077243 -74427310 - L1PA13 LINE L1 -8 6155 6026 26 0 0 0 chr17 15078591 15078617 -74425936 + AT_rich Low_complexity Low_complexity 1 26 0 2127 104 10 0 chr17 15079106 15079413 -74425140 - AluSp SINE Alu 0 313 4 360 0 0 0 chr17 15082357 15082397 -74422156 + (CA)n Simple_repeat Simple_repeat 1 40 0 423 258 134 73 chr17 15082821 15083297 -74421256 + MER113 DNA MER1_type? 15 519 -2 2094 82 20 17 chr17 15083609 15083902 -74420651 - AluSp SINE Alu -18 295 2 381 301 0 48 chr17 15083939 15084000 -74420553 + MER5B DNA MER1_type 1 63 -115 1582 170 24 0 chr17 15084000 15084294 -74420259 + AluJb SINE Alu 1 301 -11 381 301 0 48 chr17 15084294 15084418 -74420135 + MER5B DNA MER1_type 63 177 -1 611 200 200 0 chr17 15084425 15084580 -74419973 + MER5A DNA MER1_type 2 187 -2 762 291 125 16 chr17 15084790 15085213 -74419340 - Tigger8 DNA MER2_type 0 666 198 2461 63 0 0 chr17 15085408 15085710 -74418843 + AluY SINE Alu 1 302 -9 252 305 226 11 chr17 15086038 15086228 -74418325 - L2 LINE L2 0 3313 3083 2098 104 0 7 chr17 15086435 15086743 -74417810 + AluSc SINE Alu 1 306 -3 1063 314 122 24 chr17 15086786 15087424 -74417129 + L2 LINE L2 2263 2963 -351 830 239 150 69 chr17 15087520 15087999 -74416554 + MLT1G1 LTR MaLR 26 595 0 345 247 135 39 chr17 15088055 15088233 -74416320 + L2 LINE L2 3119 3313 0 998 199 71 42 chr17 15088577 15088877 -74415676 - MLT1B LTR MaLR -134 256 1 242 340 121 14 chr17 15089221 15089436 -74415117 - L2 LINE L2 -609 2705 2468 1966 129 0 7 chr17 15089565 15089867 -74414686 + AluSg SINE Alu 1 300 -10 33 66 0 0 chr17 15090067 15090128 -74414425 + AT_rich Low_complexity Low_complexity 1 61 0 1982 212 151 0 chr17 15090312 15090364 -74414189 - MLT2B2 LTR ERVL 0 515 472 270 0 0 0 chr17 15090364 15090394 -74414159 + (CA)n Simple_repeat Simple_repeat 2 31 0 1982 212 151 0 chr17 15090394 15090785 -74413768 - MLT2B2 LTR ERVL -43 472 5 1685 93 93 50 chr17 15091187 15091465 -74413088 - AluSg SINE Alu -20 290 1 467 360 40 9 chr17 15091487 15091712 -74412841 + MIR SINE MIR 25 256 -6 3152 157 13 50 chr17 15092767 15093154 -74411399 - MLT2B1 LTR ERVL 0 520 157 1941 96 6 87 chr17 15093154 15093489 -74411064 - AluSp SINE Alu -5 308 1 3152 157 13 50 chr17 15093489 15093641 -74410912 - MLT2B1 LTR ERVL -363 157 1 285 114 0 0 chr17 15094254 15094298 -74410255 - L1ME3A LINE L1 -217 5953 5910 312 247 71 0 chr17 15094308 15094393 -74410160 - L1MC4 LINE L1 -1337 6705 6615 1144 183 15 10 chr17 15094420 15094622 -74409931 - AluJo SINE Alu -23 289 87 296 248 137 20 chr17 15094629 15094782 -74409771 - L1ME3A LINE L1 -262 5902 5732 507 224 145 22 chr17 15094787 15094966 -74409587 + L2 LINE L2 3113 3313 0 209 299 17 86 chr17 15095091 15095208 -74409345 - MIR SINE MIR -67 141 33 1709 68 12 92 chr17 15095528 15095778 -74408775 - MER30 DNA MER1_type 0 230 1 342 138 0 0 chr17 15095778 15095836 -74408717 + (TCCCC)n Simple_repeat Simple_repeat 4 61 0 24 0 0 0 chr17 15095926 15095950 -74408603 + AT_rich Low_complexity Low_complexity 1 24 0 509 254 61 87 chr17 15096389 15096622 -74407931 - L1ME4a LINE L1 -4 6117 5892 2186 120 0 7 chr17 15096622 15096930 -74407623 - AluSg SINE Alu -4 306 1 509 254 61 87 chr17 15096930 15097007 -74407546 - L1ME4a LINE L1 -229 5892 5815 386 266 55 0 chr17 15097043 15097171 -74407382 - L1ME4a LINE L1 -292 5829 5695 2301 96 3 0 chr17 15097196 15097489 -74407064 - AluSg SINE Alu -16 294 1 1398 128 0 15 chr17 15097809 15098013 -74406540 + AluSg/x SINE Alu 98 298 -14 431 365 75 11 chr17 15098198 15098464 -74406089 + L2 LINE L2 2684 2966 -348 2700 139 7 19 chr17 15098617 15099033 -74405520 - MSTC LTR MaLR -17 411 1 389 297 84 19 chr17 15099619 15099774 -74404779 - MIR3 SINE MIR -13 195 31 2389 132 16 24 chr17 15099785 15100163 -74404390 - THE1C LTR MaLR 0 375 1 1786 132 3 47 chr17 15100532 15100850 -74403703 - AluJo SINE Alu 0 305 1 800 228 33 0 chr17 15100850 15101030 -74403523 - L1MB2 LINE L1 -346 5825 5640 2303 105 3 0 chr17 15101997 15102303 -74402250 + AluSx SINE Alu 1 307 -5 464 274 7 7 chr17 15102320 15102466 -74402087 - LTR16C LTR ERVL -1 490 345 255 247 99 25 chr17 15102745 15102826 -74401727 - L2 LINE L2 -21 3251 3165 273 57 0 0 chr17 15103272 15103307 -74401246 + (CA)n Simple_repeat Simple_repeat 1 35 0 232 216 0 0 chr17 15103320 15103371 -74401182 + L1MC4 LINE L1 6653 6703 -1339 * 605 298 70 26 chr17 15103348 15103734 -74400819 - L1ME4a LINE L1 -157 5964 5562 2442 85 0 3 chr17 15103799 15104105 -74400448 - AluY SINE Alu -6 305 1 2277 113 3 10 chr17 15104271 15104581 -74399972 - AluSx SINE Alu -3 309 2 25 0 0 0 chr17 15104637 15104662 -74399891 + AT_rich Low_complexity Low_complexity 1 25 0 2308 93 33 0 chr17 15104785 15105087 -74399466 - AluSx SINE Alu 0 312 1 612 238 60 24 chr17 15105312 15105480 -74399073 - FAM SINE Alu -1 174 1 1272 274 58 17 chr17 15106652 15107068 -74397485 - LTR16C LTR ERVL -1 490 58 224 184 0 0 chr17 15107855 15107893 -74396660 - L2 LINE L2 -7 3306 3269 2313 173 21 21 chr17 15107905 15108379 -74396174 - Charlie1 DNA MER1_type -16 2745 2272 264 122 0 0 chr17 15108401 15108442 -74396111 + (TCCC)n Simple_repeat Simple_repeat 2 42 0 202 143 29 0 chr17 15108443 15108478 -74396075 + CT-rich Low_complexity Low_complexity 1 36 0 1975 102 10 33 chr17 15108482 15108786 -74395767 - AluSc SINE Alu -12 297 1 2966 146 49 10 chr17 15108799 15109133 -74395420 - L1MB3 LINE L1 -77 6106 5744 234 62 0 0 chr17 15109133 15109165 -74395388 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 2966 146 49 10 chr17 15109165 15109344 -74395209 - L1MB3 LINE L1 -439 5744 5573 2322 168 70 17 chr17 15109344 15109815 -74394738 - Charlie1 DNA MER1_type -483 2278 1783 284 319 11 11 chr17 15109833 15109924 -74394629 - Charlie1 DNA MER1_type -2670 91 1 245 261 37 102 chr17 15110045 15110119 -74394434 - L1ME4a LINE L1 -57 6064 5987 2506 59 0 0 chr17 15110119 15110423 -74394130 - AluY SINE Alu -6 305 2 245 261 37 102 chr17 15110423 15110650 -74393903 - L1ME4a LINE L1 -134 5987 5783 2250 108 0 13 chr17 15110650 15110957 -74393596 - AluSg SINE Alu -7 303 1 245 261 37 102 chr17 15110957 15110976 -74393577 - L1ME4a LINE L1 -338 5783 5764 1847 174 6 13 chr17 15111016 15111327 -74393226 - AluJb SINE Alu -3 309 1 2037 148 0 13 chr17 15111341 15111652 -74392901 - AluSx SINE Alu -5 307 1 1619 145 121 0 chr17 15112422 15112704 -74391849 - L1MB3 LINE L1 -2 6181 5866 2182 110 0 10 chr17 15113207 15113507 -74391046 - AluSq SINE Alu -16 297 1 554 289 70 10 chr17 15113664 15113865 -74390688 - MIR SINE MIR -25 237 25 347 252 82 15 chr17 15115124 15115259 -74389294 + HAL1b LINE L1 222 365 -983 1720 153 34 20 chr17 15115567 15115861 -74388692 - AluJo SINE Alu -13 299 2 387 194 310 0 chr17 15116532 15116687 -74387866 + L2 LINE L2 3111 3313 0 2116 110 3 47 chr17 15116734 15117052 -74387501 - AluSx SINE Alu -8 304 1 2306 96 3 0 chr17 15117544 15117845 -74386708 + AluSp SINE Alu 1 302 -11 236 30 30 0 chr17 15118172 15118205 -74386348 + (TAGA)n Simple_repeat Simple_repeat 2 35 0 25 31 0 0 chr17 15118276 15118308 -74386245 + AT_rich Low_complexity Low_complexity 1 32 0 995 318 30 17 chr17 15118499 15118902 -74385651 - L1MC4a LINE L1 -1883 5925 5518 2146 109 7 3 chr17 15119197 15119491 -74385062 - AluSg SINE Alu -15 295 1 195 129 0 0 chr17 15121246 15121277 -74383276 + (A)n Simple_repeat Simple_repeat 1 31 0 205 129 0 0 chr17 15121374 15121405 -74383148 - L2 LINE L2 -20 3293 3263 3043 160 12 36 chr17 15121532 15121590 -74382963 - L1MB4 LINE L1 0 6180 6122 2383 88 0 0 chr17 15121590 15121886 -74382667 - AluSq SINE Alu -17 296 1 3043 160 12 36 chr17 15121886 15122389 -74382164 - L1MB4 LINE L1 -58 6122 5632 344 273 153 38 chr17 15123717 15123900 -74380653 - MIR SINE MIR -3 259 56 2799 231 60 70 chr17 15123984 15124934 -74379619 + L1MA5 LINE L1 1989 2928 -4637 207 69 0 0 chr17 15124934 15124963 -74379590 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 5064 173 51 23 chr17 15124963 15126457 -74378096 + L1MA5 LINE L1 6180 7719 0 318 348 83 20 chr17 15126468 15126721 -74377832 - LTR16C LTR ERVL -68 423 155 2429 72 0 0 chr17 15126948 15127241 -74377312 - AluSc SINE Alu -16 293 1 659 249 5 85 chr17 15127343 15127544 -74377009 + MER5A DNA MER1_type 3 187 -2 444 330 66 19 chr17 15127607 15127819 -74376734 - MIR SINE MIR -16 246 25 530 209 7 0 chr17 15128208 15128347 -74376206 + (TGG)n Simple_repeat Simple_repeat 2 141 0 330 263 0 0 chr17 15128383 15128516 -74376037 + (TGG)n Simple_repeat Simple_repeat 2 134 0 271 304 294 0 chr17 15128626 15128810 -74375743 - MIR SINE MIR -24 238 1 305 307 13 0 chr17 15129555 15129630 -74374923 + MER5C DNA MER1_type 1 76 -248 247 330 11 0 chr17 15129667 15129758 -74374795 - Charlie3 DNA MER1_type -1106 1604 1513 690 198 6 64 chr17 15129813 15129906 -74374647 + MIR SINE MIR 15 97 -165 2217 87 35 3 chr17 15129906 15130195 -74374358 - AluSc SINE Alu -11 298 1 690 198 6 64 chr17 15130195 15130258 -74374295 + MIR SINE MIR 97 162 -100 225 0 0 0 chr17 15130281 15130306 -74374247 + (TG)n Simple_repeat Simple_repeat 1 25 0 195 162 0 0 chr17 15130371 15130408 -74374145 + (TAA)n Simple_repeat Simple_repeat 1 37 0 550 86 49 0 chr17 15130506 15130587 -74373966 - L1MB3 LINE L1 -215 5968 5884 237 200 0 0 chr17 15130829 15130874 -74373679 + L2 LINE L2 3267 3311 -2 351 0 0 0 chr17 15131047 15131086 -74373467 + (TG)n Simple_repeat Simple_repeat 2 40 0 973 74 0 0 chr17 15131374 15131495 -74373058 - AluSc SINE Alu -9 300 180 23 0 0 0 chr17 15131645 15131668 -74372885 + AT_rich Low_complexity Low_complexity 1 23 0 2718 181 43 2 chr17 15131668 15132176 -74372377 - L1MB3 LINE L1 -3 6180 5652 228 242 9 16 chr17 15132263 15132337 -74372216 + CT-rich Low_complexity Low_complexity 2 54 0 2159 99 27 3 chr17 15132409 15132723 -74371830 - AluSp SINE Alu 0 313 1 769 189 8 0 chr17 15133204 15133331 -74371222 - AluSq/x SINE Alu -184 129 2 791 154 70 32 chr17 15133332 15133430 -74371123 - L1MB3 LINE L1 -689 5489 5381 231 88 0 0 chr17 15133430 15133464 -74371089 + (TG)n Simple_repeat Simple_repeat 2 35 0 791 154 70 32 chr17 15133464 15133521 -74371032 - L1MB3 LINE L1 -797 5381 5328 1300 234 109 46 chr17 15133531 15133734 -74370819 - Charlie4a DNA MER1_type -1460 501 312 2166 124 3 0 chr17 15133734 15134040 -74370513 - AluSq SINE Alu -6 307 1 1300 234 109 46 chr17 15134040 15134293 -74370260 - Charlie4a DNA MER1_type -1649 312 16 1834 178 55 27 chr17 15134347 15134712 -74369841 + THE1C LTR MaLR 1 375 0 9757 132 40 34 chr17 15134714 15136283 -74368270 + MSTA-int LTR MaLR 3 1580 0 1848 145 177 30 chr17 15136283 15136656 -74367897 + MSTA LTR MaLR 1 428 0 424 309 14 29 chr17 15136663 15136802 -74367751 - LTR33 LTR ERVL -282 239 103 369 235 0 51 chr17 15137004 15137102 -74367451 - MER103 DNA DNA -20 146 54 376 195 13 13 chr17 15137286 15137363 -74367190 - MIR SINE MIR -78 130 54 969 128 0 0 chr17 15137653 15137794 -74366759 - AluSg/x SINE Alu 0 310 170 253 349 92 46 chr17 15138030 15138182 -74366371 - MIR SINE MIR -66 196 38 198 292 159 35 chr17 15138476 15138589 -74365964 + MIR3 SINE MIR 35 161 -47 2362 80 0 29 chr17 15138644 15138958 -74365595 - AluY SINE Alu -6 305 1 2218 111 105 3 chr17 15138975 15139307 -74365246 - L1PB2 LINE L1 -3 6148 5783 359 165 10 29 chr17 15139324 15139427 -74365126 + (TA)n Simple_repeat Simple_repeat 1 101 0 385 191 0 0 chr17 15139441 15139504 -74365049 - L1PB2 LINE L1 -371 5780 5718 316 252 86 22 chr17 15139690 15139829 -74364724 - L1MC/D LINE L1 -2343 5465 5318 379 328 93 34 chr17 15140062 15140330 -74364223 - L1MC/D LINE L1 -1092 5054 4771 237 244 0 110 chr17 15140660 15140742 -74363811 - MIR3 SINE MIR -125 83 10 271 233 70 0 chr17 15140792 15140878 -74363675 - MIR SINE MIR -14 248 157 229 189 0 0 chr17 15141854 15141891 -74362662 - L1PA12 LINE L1 -5867 1714 1678 185 344 52 31 chr17 15141960 15142056 -74362497 - MIR SINE MIR -102 160 63 529 177 38 247 chr17 15142148 15142509 -74362044 - MER57A LTR ERV1 -16 387 67 2505 108 19 35 chr17 15142509 15142879 -74361674 - THE1B LTR MaLR 0 364 1 529 177 38 247 chr17 15142879 15142933 -74361620 - MER57A LTR ERV1 -336 67 3 890 294 58 46 chr17 15142936 15143779 -74360774 - MER31-int LTR ERV1 -390 7147 6232 1329 265 38 67 chr17 15144173 15144832 -74359721 - MER31-int LTR ERV1 -768 6203 2423 2663 190 21 59 chr17 15144961 15145233 -74359320 - MER31-int LTR ERV1 -1716 5821 5540 2544 65 3 0 chr17 15145233 15145543 -74359010 - AluY SINE Alu 0 311 1 2663 190 21 59 chr17 15145543 15145934 -74358619 - MER31-int LTR ERV1 -1997 5540 5183 2472 224 75 90 chr17 15145913 15147023 -74357530 - MER31-int LTR ERV1 -1889 3047 1955 * 2263 100 13 7 chr17 15147023 15147333 -74357220 - AluSx SINE Alu 0 312 1 2472 224 75 90 chr17 15147333 15147425 -74357128 - MER31-int LTR ERV1 -2981 1955 1863 332 206 0 15 chr17 15147431 15147499 -74357054 - MER34 LTR ERV1 0 542 476 434 161 86 43 chr17 15147499 15147592 -74356961 - MER34 LTR ERV1 -305 237 141 2592 49 0 0 chr17 15147733 15148037 -74356516 + AluY SINE Alu 1 304 -7 1294 179 102 37 chr17 15148222 15148603 -74355950 - MER31-int LTR ERV1 -3470 1466 1061 894 135 18 27 chr17 15148628 15149062 -74355491 + CT-rich Low_complexity Low_complexity 1 430 0 639 183 0 35 chr17 15149062 15149177 -74355376 - L1PB4 LINE L1 -17 6139 6029 958 163 67 161 chr17 15150338 15150699 -74353854 - MER57A LTR ERV1 0 403 77 486 262 199 32 chr17 15150997 15151344 -74353209 - MARNA DNA Mariner -143 443 39 2679 162 21 21 chr17 15151347 15151780 -74352773 + Tigger2a DNA MER2_type 2 434 0 539 246 29 29 chr17 15151834 15151972 -74352581 - L2 LINE L2 -1168 2146 2009 433 248 0 0 chr17 15152880 15152981 -74351572 + MIR SINE MIR 156 256 -6 228 323 39 24 chr17 15153224 15153351 -74351202 + LTR16C LTR ERVL 266 394 -97 273 189 0 27 chr17 15153445 15153519 -74351034 + (TTA)n Simple_repeat Simple_repeat 2 73 0 454 328 98 26 chr17 15153521 15154061 -74350492 + HAL1b LINE L1 197 775 -573 213 108 0 0 chr17 15154274 15154311 -74350242 + (A)n Simple_repeat Simple_repeat 1 37 0 901 345 53 45 chr17 15154413 15154484 -74350069 + L2 LINE L2 829 898 -2416 2110 145 0 3 chr17 15154484 15154794 -74349759 - AluSx SINE Alu -3 309 1 901 345 53 45 chr17 15154794 15155479 -74349074 + L2 LINE L2 898 1591 -1723 2606 146 33 15 chr17 15155570 15156029 -74348524 + L1MA8 LINE L1 5803 6269 -22 21 36 0 0 chr17 15156041 15156069 -74348484 + AT_rich Low_complexity Low_complexity 1 28 0 2174 118 0 3 chr17 15156168 15156465 -74348088 - AluSg SINE Alu -14 296 1 685 180 31 0 chr17 15156466 15156594 -74347959 - MER20 DNA MER1_type -18 201 70 650 314 44 50 chr17 15156619 15156982 -74347571 + L2 LINE L2 2353 2713 -601 226 245 0 39 chr17 15157508 15157610 -74346943 + CT-rich Low_complexity Low_complexity 3 100 0 2181 125 3 6 chr17 15157807 15158119 -74346434 - AluSx SINE Alu -1 311 1 2453 57 10 3 chr17 15158458 15158758 -74345795 + AluY SINE Alu 3 304 -7 24 0 0 0 chr17 15158758 15158782 -74345771 + AT_rich Low_complexity Low_complexity 1 24 0 225 65 0 0 chr17 15158857 15158888 -74345665 + (CA)n Simple_repeat Simple_repeat 2 32 0 231 270 0 27 chr17 15159263 15159337 -74345216 - MIR SINE MIR -101 161 90 232 289 58 41 chr17 15159937 15160058 -74344495 + L2 LINE L2 3133 3255 -17 453 339 27 22 chr17 15160115 15160298 -74344255 + MIR3 SINE MIR 4 187 -21 235 307 133 35 chr17 15160374 15160549 -74344004 - MIR3 SINE MIR -58 150 2 376 294 145 48 chr17 15160593 15160821 -74343732 - L3 LINE CR1 -26 1551 1302 1178 166 9 19 chr17 15162145 15162356 -74342197 + AluJo SINE Alu 84 292 -20 2067 114 0 0 chr17 15162569 15162892 -74341661 - AluSc SINE Alu 0 323 1 2787 19 0 0 chr17 15163437 15163744 -74340809 + AluYb8 SINE Alu 1 307 -11 299 209 52 35 chr17 15163980 15164152 -74340401 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 402 132 84 24 chr17 15164027 15164363 -74340190 + (TA)n Simple_repeat Simple_repeat 1 356 0 256 97 97 10 chr17 15164405 15164508 -74340045 + (TA)n Simple_repeat Simple_repeat 1 112 0 406 144 17 56 chr17 15164582 15164762 -74339791 + (CATA)n Simple_repeat Simple_repeat 3 175 0 212 174 38 98 chr17 15164762 15164894 -74339659 + (CATAT)n Simple_repeat Simple_repeat 5 128 0 457 177 0 0 chr17 15164906 15164985 -74339568 + AluJ/FRAM SINE Alu 219 297 -15 209 208 21 21 chr17 15165209 15165257 -74339296 + L2 LINE L2 3223 3270 -2 193 56 28 28 chr17 15165306 15165342 -74339211 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr17 15165411 15165432 -74339121 + AT_rich Low_complexity Low_complexity 1 21 0 2109 113 0 7 chr17 15165717 15166068 -74338485 + AluSg SINE Alu 1 310 0 223 205 0 0 chr17 15166382 15166421 -74338132 + MIR SINE MIR 32 70 -138 475 319 24 43 chr17 15166509 15166612 -74337941 - MIR SINE MIR -2 260 162 2637 129 95 5 chr17 15166612 15167055 -74337498 - L1MA9 LINE L1 0 6312 5830 475 319 24 43 chr17 15167055 15167161 -74337392 - MIR SINE MIR -100 162 55 2285 105 3 0 chr17 15168581 15168886 -74335667 + AluSp SINE Alu 1 306 -7 339 65 0 0 chr17 15168919 15168965 -74335588 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 723 270 39 80 chr17 15168970 15169359 -74335194 - L1ME4a LINE L1 -88 6033 5661 365 270 65 100 chr17 15170085 15170407 -74334146 - HAL1 LINE L1 -1164 1343 1048 1837 102 14 53 chr17 15170407 15170548 -74334005 - AluSp SINE Alu -39 274 148 2333 71 16 16 chr17 15170548 15170857 -74333696 - AluSp SINE Alu -4 309 1 1837 102 14 53 chr17 15170857 15170999 -74333554 - AluSp SINE Alu -165 148 2 365 270 65 100 chr17 15170999 15171258 -74333295 - HAL1 LINE L1 -1459 1048 782 286 192 144 29 chr17 15171682 15171786 -74332767 - L1MC4 LINE L1 0 8042 7927 184 204 41 20 chr17 15172103 15172152 -74332401 - L2 LINE L2 -1 3312 3263 1464 192 87 7 chr17 15172555 15173024 -74331529 + AluJo SINE Alu 1 312 0 267 108 31 31 chr17 15173024 15173078 -74331475 + GA-rich Low_complexity Low_complexity 10 66 0 3171 47 0 0 chr17 15174024 15174387 -74330166 - L1PA5 LINE L1 -2 6152 5790 544 298 82 20 chr17 15174984 15175276 -74329277 - HAL1 LINE L1 -5 2502 2193 2358 89 0 10 chr17 15175430 15175733 -74328820 + AluSg SINE Alu 2 301 -9 420 192 64 16 chr17 15175832 15175957 -74328596 - HAL1 LINE L1 -354 2153 2023 389 322 71 19 chr17 15176095 15176362 -74328191 - HAL1 LINE L1 -703 1804 1524 412 284 69 76 chr17 15176547 15176663 -74327890 - HAL1 LINE L1 -1161 1346 1231 2391 57 0 10 chr17 15176663 15176962 -74327591 + AluY SINE Alu 1 296 -15 412 284 69 76 chr17 15176962 15177120 -74327433 - HAL1 LINE L1 -1276 1231 1074 232 274 0 27 chr17 15177284 15177345 -74327208 + CT-rich Low_complexity Low_complexity 2 62 -10 2615 58 0 7 chr17 15177345 15177655 -74326898 - AluY SINE Alu -3 308 1 232 274 0 27 chr17 15177655 15177666 -74326887 + CT-rich Low_complexity Low_complexity 62 72 0 227 189 90 72 chr17 15177666 15177777 -74326776 - HAL1 LINE L1 -204 2303 2191 336 326 68 52 chr17 15177777 15178263 -74326290 - MLT1H LTR MaLR 0 549 15 1212 229 77 61 chr17 15178321 15178421 -74326132 - HAL1 LINE L1 -419 2088 1991 2063 77 0 0 chr17 15178421 15178669 -74325884 + AluY SINE Alu 39 286 -25 198 0 0 0 chr17 15178670 15178692 -74325861 + (TA)n Simple_repeat Simple_repeat 2 23 0 1212 229 77 61 chr17 15178692 15179099 -74325454 - HAL1 LINE L1 -515 1992 1571 533 287 28 0 chr17 15179186 15179329 -74325224 + MER103 DNA DNA 18 164 -2 875 283 33 39 chr17 15179755 15180175 -74324378 + MLT1K LTR MaLR 76 561 -27 2363 93 3 10 chr17 15180793 15181103 -74323450 - AluSx SINE Alu -4 308 1 261 210 0 0 chr17 15181438 15181500 -74323053 + (CA)n Simple_repeat Simple_repeat 1 62 0 447 304 72 56 chr17 15181996 15182410 -74322143 + L2 LINE L2 2883 3303 -10 1505 138 53 0 chr17 15182553 15182799 -74321754 + MLT2C2 LTR ERVL 1 259 -205 655 105 0 0 chr17 15182799 15182885 -74321668 + AluY SINE Alu 211 296 -15 902 139 58 52 chr17 15182885 15183057 -74321496 + MLT2C2 LTR ERVL 252 424 -40 563 335 24 5 chr17 15183078 15183290 -74321263 - MIR SINE MIR -38 224 9 737 193 77 11 chr17 15183590 15183771 -74320782 - MER33 DNA MER1_type -27 336 144 855 210 5 11 chr17 15183781 15183974 -74320579 - MER33 DNA MER1_type -250 74 1 206 237 0 88 chr17 15185307 15185421 -74319132 + T-rich Low_complexity Low_complexity 5 108 0 384 322 17 40 chr17 15186484 15186661 -74317892 + MIR SINE MIR 20 192 -70 2189 103 3 28 chr17 15187205 15187525 -74317028 - AluSp SINE Alu -1 312 1 488 321 67 5 chr17 15187546 15187739 -74316814 - MIR SINE MIR -44 218 14 435 204 8 15 chr17 15188393 15188525 -74316028 + CT-rich Low_complexity Low_complexity 2 132 0 464 259 130 78 chr17 15188539 15188976 -74315577 - HAL1 LINE L1 -6 2501 2042 1925 137 0 0 chr17 15188995 15189272 -74315281 + AluSx SINE Alu 28 304 -8 1199 265 21 13 chr17 15189310 15189683 -74314870 - HAL1 LINE L1 -604 1903 1528 1044 271 108 85 chr17 15189693 15190105 -74314448 - HAL1 LINE L1 -1051 1456 1055 2151 126 3 3 chr17 15190105 15190414 -74314139 - AluSg SINE Alu 0 310 2 1044 271 108 85 chr17 15190414 15191125 -74313428 - HAL1 LINE L1 -1452 1055 308 387 291 33 14 chr17 15191214 15191427 -74313126 - HAL1 LINE L1 -604 1903 1687 325 290 30 91 chr17 15191479 15191710 -74312843 - HAL1 LINE L1 -2290 217 1 233 314 0 0 chr17 15192034 15192120 -74312433 + CT-rich Low_complexity Low_complexity 3 88 0 412 214 36 0 chr17 15192214 15192298 -74312255 - MER5A DNA MER1_type -77 112 26 2336 105 3 3 chr17 15192382 15192688 -74311865 - AluSx SINE Alu -6 306 1 262 33 0 0 chr17 15194780 15194810 -74309743 - MSTB LTR MaLR -17 411 382 2349 84 7 3 chr17 15194811 15195120 -74309433 + AluSx SINE Alu 1 310 -2 2420 144 12 27 chr17 15195120 15195522 -74309031 - MSTB LTR MaLR -30 396 1 490 331 103 0 chr17 15195571 15195746 -74308807 - MER91A DNA MER1_type -3 193 1 1703 179 23 10 chr17 15196816 15197117 -74307436 - AluJo SINE Alu -7 305 1 25 31 0 0 chr17 15197249 15197281 -74307272 + AT_rich Low_complexity Low_complexity 1 32 0 467 251 29 58 chr17 15198193 15198364 -74306189 - MIR3 SINE MIR -9 199 34 669 255 53 85 chr17 15198373 15198449 -74306104 - MER113 DNA MER1_type? -5 516 439 2183 113 3 7 chr17 15198449 15198751 -74305802 + AluSq SINE Alu 6 306 -7 669 255 53 85 chr17 15198751 15198992 -74305561 - MER113 DNA MER1_type? -82 439 209 1464 200 128 19 chr17 15198998 15199358 -74305195 - MLT1F1 LTR MaLR 0 567 169 467 230 39 34 chr17 15199390 15199568 -74304985 - MER113 DNA MER1_type? -342 179 1 628 189 39 128 chr17 15199831 15199920 -74304633 - HAL1 LINE L1 -1324 1183 1088 2091 124 3 0 chr17 15199920 15200218 -74304335 + AluSq SINE Alu 3 301 -12 628 189 39 128 chr17 15200218 15200409 -74304144 - HAL1 LINE L1 -1419 1088 928 197 298 123 0 chr17 15200757 15200814 -74303739 - L2 LINE L2 -40 3232 3169 2506 107 107 13 chr17 15200848 15201239 -74303314 - MSTA LTR MaLR 0 428 1 240 293 158 15 chr17 15201884 15202017 -74302536 + MIR3 SINE MIR 28 179 -29 663 249 50 33 chr17 15202383 15202425 -74302128 + MER5A DNA MER1_type 6 46 -143 1671 199 51 14 chr17 15202425 15202777 -74301776 - MLT1A1 LTR MaLR 0 365 1 663 249 50 33 chr17 15202777 15202915 -74301638 + MER5A DNA MER1_type 46 189 0 304 255 29 59 chr17 15202968 15203070 -74301483 - MER5A DNA MER1_type -75 114 16 343 262 73 37 chr17 15203099 15203263 -74301290 + MIR3 SINE MIR 33 202 -6 7725 49 0 0 chr17 15204587 15205629 -74298924 - L1PA7 LINE L1 -2 6152 5112 514 313 129 17 chr17 15205639 15206091 -74298462 - L1ME LINE L1 -301 5820 5319 4013 148 22 53 chr17 15206102 15206839 -74297714 - L1MC1 LINE L1 -5 6328 5615 1746 184 39 39 chr17 15206868 15207232 -74297321 - MLT1A1 LTR MaLR -1 364 1 22 35 0 0 chr17 15208878 15208907 -74295646 + AT_rich Low_complexity Low_complexity 1 29 0 1374 158 4 23 chr17 15208954 15209220 -74295333 + L1MB5 LINE L1 5567 5827 -347 7396 66 9 0 chr17 15209220 15210372 -74294181 + L1PA8 LINE L1 4991 6164 -8 1949 176 8 17 chr17 15210387 15210746 -74293807 + L1MB5 LINE L1 5812 6167 -7 515 290 0 0 chr17 15212732 15212856 -74291697 - MER94 DNA DNA -10 124 1 307 290 84 55 chr17 15213359 15213748 -74290805 - MLT1L LTR MaLR -7 504 108 1071 152 6 22 chr17 15214721 15214899 -74289654 + MER58B DNA MER1_type 167 341 0 754 277 113 68 chr17 15215343 15215801 -74288752 + L3 LINE CR1 477 955 -622 2328 252 57 56 chr17 15215821 15216536 -74288017 + L1ME3A LINE L1 4885 5598 -572 1470 217 85 96 chr17 15216536 15216700 -74287853 + MER34 LTR ERV1 1 165 -377 2446 80 0 0 chr17 15216700 15216999 -74287554 + AluSx SINE Alu 1 299 -13 1470 217 85 96 chr17 15216999 15217378 -74287175 + MER34 LTR ERV1 165 538 -4 2328 252 57 56 chr17 15217378 15217777 -74286776 + L1ME3A LINE L1 5598 5999 -171 2270 116 0 0 chr17 15217777 15218088 -74286465 + AluSp SINE Alu 1 311 -2 2328 252 57 56 chr17 15218088 15218221 -74286332 + L1ME3A LINE L1 5999 6130 -40 2355 86 3 10 chr17 15218583 15218887 -74285666 + AluSc SINE Alu 2 303 -6 572 197 67 91 chr17 15218903 15219111 -74285442 + MER102a DNA MER1_type 108 310 -20 485 268 99 53 chr17 15219495 15219613 -74284940 - L2 LINE L2 -8 3305 3194 204 97 0 0 chr17 15219613 15219644 -74284909 + (CATA)n Simple_repeat Simple_repeat 2 32 0 485 268 99 53 chr17 15219644 15219682 -74284871 - L2 LINE L2 -119 3194 3159 2104 120 3 0 chr17 15219682 15219974 -74284579 + AluSq SINE Alu 1 293 -20 485 268 99 53 chr17 15219974 15220347 -74284206 - L2 LINE L2 -154 3159 2722 1790 137 0 58 chr17 15220495 15220797 -74283756 + AluJo SINE Alu 1 284 -28 198 0 0 0 chr17 15220797 15220819 -74283734 + (ATG)n Simple_repeat Simple_repeat 2 23 0 1790 137 0 58 chr17 15220819 15220844 -74283709 + AluJo SINE Alu 284 309 -3 267 276 0 0 chr17 15221891 15221949 -74282604 - L2 LINE L2 -1 3271 3214 2256 76 14 3 chr17 15222446 15222734 -74281819 + AluSc SINE Alu 1 291 -18 342 285 43 31 chr17 15223057 15223313 -74281240 - L1M4 LINE L1 -1440 4706 4448 6807 61 2 3 chr17 15223318 15224174 -74280379 - L1PA8 LINE L1 0 6172 5318 7584 200 50 14 chr17 15224309 15225393 -74279160 - L1MB8 LINE L1 0 6178 5134 1364 249 51 33 chr17 15225393 15225782 -74278771 - MSTD LTR MaLR 0 396 1 7584 200 50 14 chr17 15225782 15225975 -74278578 - L1MB8 LINE L1 -1044 5134 4949 2266 119 0 0 chr17 15225975 15226270 -74278283 + AluSx SINE Alu 3 297 -15 7584 200 50 14 chr17 15226270 15227653 -74276900 - L1MB8 LINE L1 -1229 4949 3421 444 243 14 142 chr17 15227660 15227895 -74276658 + L2 LINE L2 3051 3242 -71 2099 113 0 14 chr17 15227895 15228187 -74276366 - AluSc SINE Alu -21 288 1 444 243 14 142 chr17 15228187 15228247 -74276306 + L2 LINE L2 3242 3308 -5 231 339 60 42 chr17 15228247 15228801 -74275752 - L1M4 LINE L1 -2243 3903 3340 21 71 0 0 chr17 15229091 15229133 -74275420 + AT_rich Low_complexity Low_complexity 1 42 0 2326 109 0 0 chr17 15230517 15230828 -74273725 + AluY SINE Alu 1 311 0 837 276 172 37 chr17 15231541 15231976 -74272577 + MLT1J LTR MaLR 1 494 -17 973 250 70 13 chr17 15232314 15232626 -74271927 + MARNA DNA Mariner 169 498 -88 184 139 0 28 chr17 15234073 15234109 -74270444 - L2 LINE L2 -15 3298 3264 2184 76 23 36 chr17 15234270 15234597 -74269956 - AluSq SINE Alu 0 313 1 213 94 0 0 chr17 15235319 15235351 -74269202 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 435 272 256 5 chr17 15235502 15235693 -74268860 + MIR SINE MIR 2 240 -22 401 338 0 15 chr17 15235727 15235860 -74268693 + MIR SINE MIR 77 207 -55 362 215 99 16 chr17 15236360 15236481 -74268072 + LTR67 LTR ERVL 426 556 -1 290 26 26 0 chr17 15236555 15236594 -74267959 + (TATG)n Simple_repeat Simple_repeat 1 40 0 2232 91 0 10 chr17 15236653 15236950 -74267603 + AluSq SINE Alu 1 294 -19 950 254 48 121 chr17 15236957 15237579 -74266974 - L2 LINE L2 0 3313 2729 2364 80 0 0 chr17 15237707 15237993 -74266560 - AluSc SINE Alu -23 286 1 242 324 169 7 chr17 15239184 15239320 -74265233 + MIR3 SINE MIR 38 195 -13 228 320 74 42 chr17 15239397 15239567 -74264986 - MIR3 SINE MIR -24 184 8 1806 214 118 16 chr17 15239575 15240310 -74264243 + L1ME1 LINE L1 5312 6163 -3 1948 174 58 0 chr17 15241592 15241937 -74262616 + MLT1A1 LTR MaLR 1 365 0 217 338 44 50 chr17 15242576 15242736 -74261817 - L2 LINE L2 -56 3216 3058 2076 128 0 7 chr17 15243522 15243820 -74260733 - AluSg SINE Alu -14 296 1 378 230 58 43 chr17 15244491 15244630 -74259923 + L1ME LINE L1 5664 5804 -317 709 216 9 0 chr17 15244696 15244812 -74259741 + FLAM_A SINE Alu 1 117 -16 211 91 0 0 chr17 15244812 15244845 -74259708 + (TAAAA)n Simple_repeat Simple_repeat 2 175 0 204 237 17 51 chr17 15244924 15245042 -74259511 + T-rich Low_complexity Low_complexity 2 115 0 207 182 45 30 chr17 15245059 15245125 -74259428 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 * 310 247 129 87 chr17 15245099 15245156 -74259397 - L1MEc LINE L1 -3987 2409 2356 819 142 8 15 chr17 15245156 15245290 -74259263 - FLAM_C SINE Alu 0 133 1 310 247 129 87 chr17 15245290 15245519 -74259034 - L1MEc LINE L1 -4040 2356 2111 26 64 0 0 chr17 15245973 15246020 -74258533 + AT_rich Low_complexity Low_complexity 1 47 0 452 311 81 28 chr17 15246305 15246739 -74257814 - L1ME3A LINE L1 -286 5867 5411 531 208 0 0 chr17 15246761 15246857 -74257696 - FLAM_A SINE Alu -41 101 6 290 239 76 18 chr17 15246863 15247038 -74257515 - L1ME3A LINE L1 -752 5401 5240 * 345 282 42 42 chr17 15247033 15247274 -74257279 - L1ME3A LINE L1 -4916 1203 963 394 281 0 89 chr17 15247283 15247429 -74257124 - L2 LINE L2 0 3313 3181 406 264 72 82 chr17 15247429 15247721 -74256832 - L1ME3A LINE L1 -5159 960 672 199 355 24 89 chr17 15248504 15249088 -74255465 + L2 LINE L2 2191 2736 -578 471 289 112 48 chr17 15249175 15249262 -74255291 + MLT1J2 LTR MaLR 69 149 -301 192 97 0 0 chr17 15249262 15249293 -74255260 + (TG)n Simple_repeat Simple_repeat 2 32 0 471 289 112 48 chr17 15249293 15249562 -74254991 + MLT1J2 LTR MaLR 149 448 -2 264 30 0 0 chr17 15249932 15249965 -74254588 + (TG)n Simple_repeat Simple_repeat 2 34 0 327 277 65 26 chr17 15251011 15251166 -74253387 - MLT1L LTR MaLR -6 609 449 2311 107 0 0 chr17 15251997 15252295 -74252258 + AluSc SINE Alu 1 298 -11 2050 82 0 72 chr17 15252813 15253149 -74251404 - AluY SINE Alu 0 314 1 1167 112 28 0 chr17 15253637 15253816 -74250737 - L1PA13 LINE L1 -7 6156 5973 548 81 69 0 chr17 15253816 15253903 -74250650 + L1P4 LINE L1 5513 5605 -563 614 130 0 0 chr17 15254051 15254151 -74250402 + L1P4 LINE L1 5608 5707 -461 2293 94 7 0 chr17 15254720 15255019 -74249534 + AluSx SINE Alu 2 302 -10 2321 113 3 0 chr17 15255019 15255403 -74249150 + AluSp SINE Alu 1 386 0 2296 148 56 2 chr17 15255417 15255830 -74248723 - LTR47A LTR ERVL -17 435 1 3867 154 64 52 chr17 15255837 15257305 -74247248 - LTR49-int LTR ERV1 -687 6071 4569 9149 159 50 21 chr17 15257320 15258711 -74245842 - LTR49-int LTR ERV1 -1905 4853 3504 3461 147 68 42 chr17 15258711 15259418 -74245135 + LTR8A LTR ERV1 3 727 0 9149 159 50 21 chr17 15259418 15259804 -74244749 - LTR49-int LTR ERV1 -3254 3504 3046 2096 107 3 32 chr17 15259804 15260113 -74244440 - AluSp SINE Alu -13 300 1 9149 159 50 21 chr17 15260113 15260219 -74244334 - LTR49-int LTR ERV1 -3712 3046 2945 941 104 8 0 chr17 15260251 15260385 -74244168 - AluSp/q SINE Alu -4 309 175 1271 159 81 51 chr17 15260385 15260882 -74243671 - LTR49-int LTR ERV1 -2770 3561 1181 463 188 0 0 chr17 15260909 15261006 -74243547 - LTR49-int LTR ERV1 -3220 2726 854 * 940 229 23 36 chr17 15260999 15261307 -74243246 - LTR49-int LTR ERV1 -4060 2271 1984 344 332 35 66 chr17 15261344 15261414 -74243139 - L1 LINE L1 -1635 4511 4440 1995 114 4 4 chr17 15261414 15261734 -74242819 - AluSg SINE Alu 0 320 1 344 332 35 66 chr17 15261734 15261782 -74242771 - L1 LINE L1 -1706 4440 4392 198 0 0 0 chr17 15261782 15261804 -74242749 + (TG)n Simple_repeat Simple_repeat 2 23 0 344 332 35 66 chr17 15261804 15261919 -74242634 - L1 LINE L1 -1754 4392 4284 849 266 145 18 chr17 15261919 15262318 -74242235 - MLT1J2 LTR MaLR 0 450 1 344 332 35 66 chr17 15262318 15262367 -74242186 - L1 LINE L1 -1862 4284 4235 256 327 52 13 chr17 15262508 15262814 -74241739 - L1 LINE L1 -2207 3939 3622 25859 59 3 6 chr17 15262988 15267348 -74237205 - L1PA6 LINE L1 -1 6153 1809 747 119 0 0 chr17 15267359 15267468 -74237085 - L1PA6 LINE L1 -6027 119 11 2465 227 67 47 chr17 15267475 15268170 -74236383 - L1ME1 LINE L1 -63 6103 5358 1962 133 0 20 chr17 15268170 15268331 -74236222 - AluY SINE Alu -15 296 142 279 0 0 0 chr17 15268331 15268362 -74236191 + (TA)n Simple_repeat Simple_repeat 1 31 0 1962 133 0 20 chr17 15268362 15268500 -74236053 - AluY SINE Alu -169 142 3 2465 227 67 47 chr17 15268500 15268903 -74235650 - L1ME1 LINE L1 -808 5358 4965 777 238 34 55 chr17 15268923 15269102 -74235451 - MIR SINE MIR -18 244 70 2507 60 3 0 chr17 15269102 15269404 -74235149 + AluY SINE Alu 1 303 -8 777 238 34 55 chr17 15269404 15269459 -74235094 - MIR SINE MIR -192 70 15 262 259 85 5 chr17 15269507 15269719 -74234834 - L1ME1 LINE L1 -2840 3306 3078 386 305 73 76 chr17 15269950 15270252 -74234301 + L1MC4a LINE L1 6499 6799 -1009 285 349 24 42 chr17 15271702 15271868 -74232685 + L2 LINE L2 2888 3050 -222 1535 148 7 14 chr17 15271948 15272232 -74232321 + Tigger2 DNA MER2_type 1 282 -2436 718 161 8 0 chr17 15272232 15272350 -74232203 + AluSq/x SINE Alu 1 119 -194 2507 162 32 4 chr17 15272378 15272842 -74231711 + Tigger2 DNA MER2_type 268 744 -1974 1079 148 0 0 chr17 15272970 15273146 -74231407 - MER50 LTR ERV1 -23 711 536 1285 101 11 0 chr17 15273164 15273343 -74231210 - AluSg/x SINE Alu 0 312 132 2846 153 24 22 chr17 15273344 15273895 -74230658 - MER50 LTR ERV1 -182 552 1 1485 157 4 15 chr17 15273920 15274181 -74230372 + Tigger2 DNA MER2_type 2451 2708 -10 273 103 0 0 chr17 15274543 15274582 -74229971 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 332 236 17 28 chr17 15274585 15274763 -74229790 + CT-rich Low_complexity Low_complexity 4 179 0 323 192 13 0 chr17 15274812 15274890 -74229663 + CT-rich Low_complexity Low_complexity 2 80 0 784 135 5 43 chr17 15274907 15275092 -74229461 + (TTCCC)n Simple_repeat Simple_repeat 3 180 0 245 277 145 32 chr17 15275453 15275702 -74228851 - L1ME LINE L1 -459 5662 5386 795 306 103 42 chr17 15275740 15276458 -74228095 - L1ME LINE L1 -795 5351 4590 30 45 0 0 chr17 15276597 15276641 -74227912 + AT_rich Low_complexity Low_complexity 1 44 0 2345 104 0 0 chr17 15277185 15277494 -74227059 - AluSg1 SINE Alu 0 309 1 28 0 0 0 chr17 15277717 15277745 -74226808 + AT_rich Low_complexity Low_complexity 1 28 0 279 154 0 0 chr17 15278733 15278785 -74225768 - L1MB3 LINE L1 -1 6182 6131 259 141 26 0 chr17 15278785 15278863 -74225690 + (TA)n Simple_repeat Simple_repeat 2 81 0 1811 176 28 42 chr17 15278863 15278880 -74225673 - L1MB3 LINE L1 -17 6166 6150 2089 114 3 7 chr17 15278880 15279178 -74225375 - AluY SINE Alu -14 297 1 1811 176 28 42 chr17 15279178 15279503 -74225050 - L1MB3 LINE L1 -33 6150 5829 2583 71 0 0 chr17 15279503 15279814 -74224739 - AluY SINE Alu 0 311 1 1811 176 28 42 chr17 15279814 15279895 -74224658 - L1MB3 LINE L1 -354 5829 5748 1204 159 0 0 chr17 15279989 15280178 -74224375 - MER5A DNA MER1_type 0 189 1 1147 15 0 0 chr17 15281537 15281668 -74222885 - L1PA5 LINE L1 -9 6145 6015 2847 6 0 0 chr17 15282718 15283029 -74221524 - AluYa5 SINE Alu 0 311 1 252 292 0 15 chr17 15283255 15283320 -74221233 - L2 LINE L2 0 3313 3250 1948 188 27 17 chr17 15283344 15283749 -74220804 - MLT2D LTR ERVL 0 414 6 586 229 21 7 chr17 15283754 15283894 -74220659 - MER5B DNA MER1_type -35 143 2 456 316 72 8 chr17 15283894 15284142 -74220411 - L2 LINE L2 -51 3262 2999 351 0 0 0 chr17 15284287 15284326 -74220227 + (CA)n Simple_repeat Simple_repeat 2 40 0 395 136 21 78 chr17 15284768 15284959 -74219594 + (TA)n Simple_repeat Simple_repeat 1 180 0 1096 168 43 13 chr17 15284990 15285222 -74219331 - L1MC3 LINE L1 -23 7762 7524 2295 106 23 0 chr17 15285832 15286135 -74218418 - AluSg SINE Alu 0 310 1 306 321 36 0 chr17 15286153 15286265 -74218288 - L2 LINE L2 -3 3269 3154 296 312 29 59 chr17 15286717 15286887 -74217666 + MIR SINE MIR 86 250 -12 464 60 30 0 chr17 15287693 15287760 -74216793 + (TTTTC)n Simple_repeat Simple_repeat 2 70 0 266 299 0 26 chr17 15288586 15288663 -74215890 + L2 LINE L2 3232 3306 -7 230 203 149 40 chr17 15288731 15288805 -74215748 - L3b LINE CR1 -4 1579 1498 1987 123 10 17 chr17 15289148 15289473 -74215080 + AluSq SINE Alu 1 313 0 26 64 0 0 chr17 15289894 15289941 -74214612 + AT_rich Low_complexity Low_complexity 1 47 0 2170 141 43 13 chr17 15290100 15290117 -74214436 - MER57A LTR ERV1 0 403 388 2230 112 13 0 chr17 15290117 15290422 -74214131 + AluSc SINE Alu 1 309 0 2170 141 43 13 chr17 15290422 15290795 -74213758 - MER57A LTR ERV1 -15 388 1 352 256 31 78 chr17 15291427 15291485 -74213068 - L1ME LINE L1 -454 5667 5608 2301 85 0 0 chr17 15291485 15291794 -74212759 - AluY SINE Alu 0 309 1 352 256 31 78 chr17 15291794 15291863 -74212690 - L1ME LINE L1 -513 5608 5545 182 226 32 108 chr17 15292922 15293015 -74211538 + L3 LINE CR1 627 712 -865 2309 82 0 57 chr17 15293344 15293377 -74211176 - AluSx SINE Alu 0 312 279 414 0 0 0 chr17 15293377 15293423 -74211130 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 2309 82 0 57 chr17 15293423 15293720 -74210833 - AluSx SINE Alu -33 279 1 250 338 83 30 chr17 15294192 15294458 -74210095 + MLT1L LTR MaLR 1 280 -335 2413 101 0 0 chr17 15294480 15294786 -74209767 - AluSx SINE Alu -6 306 1 2167 84 0 25 chr17 15296063 15296405 -74208148 + AluSg SINE Alu 2 336 0 235 263 97 42 chr17 15297166 15297383 -74207170 - L1ME4a LINE L1 -16 6105 5877 317 223 150 86 chr17 15297457 15297677 -74206876 - L1ME4a LINE L1 -382 5739 5506 27 49 0 0 chr17 15297686 15297727 -74206826 + AT_rich Low_complexity Low_complexity 1 41 0 2164 83 31 3 chr17 15297764 15298054 -74206499 - AluY SINE Alu -13 298 1 21 36 0 0 chr17 15298131 15298159 -74206394 + AT_rich Low_complexity Low_complexity 1 28 0 1960 132 3 0 chr17 15298464 15298753 -74205800 - AluSx SINE Alu 0 312 23 885 236 16 68 chr17 15299128 15299438 -74205115 + L2 LINE L2 3020 3313 0 1915 149 0 32 chr17 15299726 15300034 -74204519 - AluJb SINE Alu -13 299 2 371 320 80 20 chr17 15300969 15301169 -74203384 + L3 LINE CR1 1347 1558 -19 2195 123 3 0 chr17 15301443 15301751 -74202802 + AluSx SINE Alu 1 309 -3 1800 217 50 28 chr17 15301783 15302220 -74202333 - MLT1C LTR MaLR 0 467 41 2560 151 51 12 chr17 15302220 15302630 -74201923 - MSTB LTR MaLR 0 426 1 9933 156 6 41 chr17 15302630 15303996 -74200557 - MSTB-int LTR MaLR 0 1651 356 2276 114 0 0 chr17 15303996 15304303 -74200250 - AluY SINE Alu -4 307 1 9933 156 6 41 chr17 15304303 15304647 -74199906 - MSTB-int LTR MaLR -1295 356 1 2345 188 28 26 chr17 15304647 15305072 -74199481 - MSTB LTR MaLR 0 426 1 1800 217 50 28 chr17 15305072 15305089 -74199464 - MLT1C LTR MaLR -425 42 1 251 300 11 11 chr17 15305654 15305744 -74198809 + MLT1F1 LTR MaLR 136 225 -324 388 250 62 0 chr17 15305831 15305958 -74198595 + MLT1F1 LTR MaLR 327 409 0 730 250 7 7 chr17 15306104 15306256 -74198297 + MER5A DNA MER1_type 38 189 0 301 176 0 0 chr17 15306350 15306401 -74198152 - MER5B DNA MER1_type -126 52 2 2329 62 3 10 chr17 15306646 15306936 -74197617 + AluY SINE Alu 1 288 -23 871 149 8 15 chr17 15307364 15307524 -74197029 - FLAM_C SINE Alu 0 159 1 212 332 121 30 chr17 15307528 15307760 -74196793 + L2 LINE L2 2149 2401 -913 583 264 57 44 chr17 15309244 15309559 -74194994 - L1ME4a LINE L1 0 6121 5803 2486 75 3 0 chr17 15309800 15310105 -74194448 - AluY SINE Alu -5 306 1 370 251 120 23 chr17 15310498 15310673 -74193880 + L1MB8 LINE L1 5986 6177 -1 295 310 54 22 chr17 15310996 15311137 -74193416 + MIR3 SINE MIR 63 208 0 2265 103 13 0 chr17 15311430 15311731 -74192822 - AluSp SINE Alu -8 305 1 2114 122 3 25 chr17 15312113 15312432 -74192121 + AluSx SINE Alu 1 312 0 243 0 0 0 chr17 15313460 15313487 -74191066 + (CA)n Simple_repeat Simple_repeat 2 28 0 317 208 14 28 chr17 15313945 15314017 -74190536 - L2 LINE L2 -1 3271 3201 5316 147 147 44 chr17 15314355 15314556 -74189997 + Tigger3b DNA MER2_type 1 180 -2848 2176 91 3 46 chr17 15314556 15314863 -74189690 + AluSp SINE Alu 2 295 -18 5316 147 147 44 chr17 15314863 15314891 -74189662 + Tigger3b DNA MER2_type 180 204 -2824 279 0 0 0 chr17 15314891 15314922 -74189631 + (CA)n Simple_repeat Simple_repeat 2 32 0 5316 147 147 44 chr17 15314922 15315431 -74189122 + Tigger3b DNA MER2_type 204 659 -2369 2238 84 10 13 chr17 15315431 15315730 -74188823 + AluSc SINE Alu 1 298 -11 5316 147 147 44 chr17 15315730 15316105 -74188448 + Tigger3b DNA MER2_type 659 1231 0 2271 148 81 26 chr17 15316903 15317064 -74187489 - MER39 LTR ERV1 -2 705 554 2371 92 0 0 chr17 15317064 15317359 -74187194 - AluSg SINE Alu -15 295 1 2271 148 81 26 chr17 15317359 15317841 -74186712 - MER39 LTR ERV1 -153 554 4 777 254 150 52 chr17 15318526 15318872 -74185681 - L2 LINE L2 -1 3312 2933 433 324 37 0 chr17 15318905 15319041 -74185512 - L2 LINE L2 -529 2785 2645 187 134 59 34 chr17 15319391 15319510 -74185043 + (TA)n Simple_repeat Simple_repeat 2 123 0 192 40 0 0 chr17 15319510 15319535 -74185018 + (GA)n Simple_repeat Simple_repeat 2 26 0 1231 217 29 53 chr17 15320904 15321407 -74183146 + L1M4 LINE L1 2289 2856 -3290 587 113 12 0 chr17 15321407 15321487 -74183066 + AluS SINE Alu 220 300 -12 269 278 59 25 chr17 15321488 15321680 -74182873 - L1MC/D LINE L1 -286 5884 5724 2118 131 0 0 chr17 15323114 15323419 -74181134 + AluSq SINE Alu 1 305 -8 461 289 19 19 chr17 15323675 15323831 -74180722 - MIR SINE MIR 0 262 107 225 217 17 0 chr17 15324339 15324399 -74180154 + (TA)n Simple_repeat Simple_repeat 1 61 0 267 235 78 39 chr17 15324509 15324611 -74179942 - MLT1I LTR MaLR -20 389 284 2490 35 0 0 chr17 15324631 15324951 -74179602 + AluY SINE Alu 1 320 0 207 0 0 0 chr17 15325461 15325484 -74179069 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3547 164 55 36 chr17 15327151 15327889 -74176664 + LTR1B LTR ERV1 1 771 -14 1972 125 69 19 chr17 15327898 15328259 -74176294 + L1MB3 LINE L1 5805 6183 0 1989 168 116 13 chr17 15329205 15329586 -74174967 + MER83 LTR ERV1 23 442 -6 188 317 0 0 chr17 15330190 15330250 -74174303 + L2 LINE L2 2590 2649 -665 30 27 0 0 chr17 15330318 15330355 -74174198 + AT_rich Low_complexity Low_complexity 1 37 0 31761 113 13 58 chr17 15330359 15336821 -74167732 + L1PA8 LINE L1 12 6172 0 2157 108 162 7 chr17 15336985 15337419 -74167134 + MER4B LTR ERV1 5 788 -84 301 54 0 0 chr17 15337419 15337456 -74167097 + MER4A LTR ERV1 628 664 0 261 0 0 0 chr17 15337491 15337520 -74167033 + (TG)n Simple_repeat Simple_repeat 2 30 0 3090 113 21 0 chr17 15337685 15338110 -74166443 + MER57B LTR ERV1 1 434 0 456 299 176 49 chr17 15338131 15338539 -74166014 + L2 LINE L2 2812 3271 -1 1054 294 83 41 chr17 15338565 15338790 -74165763 + L2 LINE L2 2429 2643 -670 309 26 0 0 chr17 15338790 15338828 -74165725 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2113 95 0 11 chr17 15338832 15339117 -74165436 - AluSx SINE Alu -30 282 1 1054 294 83 41 chr17 15339117 15339737 -74164816 + L2 LINE L2 2645 3313 0 239 330 79 49 chr17 15339746 15339949 -74164604 + MIR SINE MIR 1 209 -53 216 200 0 0 chr17 15340163 15340203 -74164350 + GA-rich Low_complexity Low_complexity 3 42 0 299 295 87 51 chr17 15341214 15341372 -74163181 - L1ME4a LINE L1 -123 5998 5847 2350 90 0 3 chr17 15341372 15341672 -74162881 + AluSq SINE Alu 5 303 -10 299 295 87 51 chr17 15341672 15341906 -74162647 - L1ME4a LINE L1 -274 5847 5592 344 308 150 23 chr17 15341984 15342250 -74162303 - L1ME4a LINE L1 -1082 5064 4765 360 278 35 42 chr17 15342273 15342417 -74162136 - L2 LINE L2 -5 3267 3125 472 309 198 45 chr17 15342495 15343273 -74161280 - L2 LINE L2 -561 2753 2095 2449 95 0 0 chr17 15343273 15343579 -74160974 + AluSx SINE Alu 1 306 -6 472 309 198 45 chr17 15343579 15343754 -74160799 - L2 LINE L2 -1219 2095 1948 192 77 0 0 chr17 15343754 15343780 -74160773 + (TTG)n Simple_repeat Simple_repeat 2 27 0 472 309 198 45 chr17 15343780 15344092 -74160461 - L2 LINE L2 -1366 1948 1293 305 318 16 51 chr17 15344153 15344368 -74160185 - L1 LINE L1 -1419 4727 4519 2611 117 14 3 chr17 15344374 15344734 -74159819 - THE1B LTR MaLR 0 364 1 755 212 0 27 chr17 15345471 15345617 -74158936 - FLAM_A SINE Alu 0 142 1 2140 92 0 76 chr17 15345939 15346267 -74158286 - AluSq SINE Alu -10 303 1 22 0 0 0 chr17 15346276 15346298 -74158255 + AT_rich Low_complexity Low_complexity 1 22 0 1231 41 0 0 chr17 15346557 15346703 -74157850 - AluY SINE Alu -10 301 156 1852 173 0 7 chr17 15347233 15347533 -74157020 - AluJb SINE Alu -14 298 1 226 284 30 0 chr17 15347997 15348064 -74156489 + MLT1L LTR MaLR 219 287 -328 2541 178 30 65 chr17 15348130 15348671 -74155882 - L1MC2 LINE L1 -11 6333 5819 2192 91 0 0 chr17 15348671 15348947 -74155606 - AluSp SINE Alu -1 312 37 2541 178 30 65 chr17 15348947 15349078 -74155475 - L1MC2 LINE L1 -525 5819 5685 483 285 106 12 chr17 15349080 15349336 -74155217 + MLT1L LTR MaLR 329 608 -7 537 349 35 23 chr17 15350047 15350305 -74154248 - L3 LINE CR1 -236 1341 1081 829 265 27 31 chr17 15350316 15350610 -74153943 - LTR16C LTR ERVL 0 491 199 218 145 16 48 chr17 15350804 15350866 -74153687 + (TTTA)n Simple_repeat Simple_repeat 3 62 0 1629 173 83 67 chr17 15352599 15353045 -74151508 + MLT1C LTR MaLR 1 453 -14 459 230 71 8 chr17 15353907 15354033 -74150520 + MIR SINE MIR 86 219 -43 236 348 0 22 chr17 15354161 15354266 -74150287 - MIR SINE MIR -63 145 49 1868 162 7 10 chr17 15354325 15354634 -74149919 + AluJb SINE Alu 5 312 0 649 162 40 29 chr17 15356140 15356313 -74148240 - L1MB3 LINE L1 -2 6181 6007 1292 161 56 14 chr17 15356343 15356439 -74148114 - L1MB2 LINE L1 -149 6022 5931 505 123 0 12 chr17 15356439 15356520 -74148033 - MADE1 DNA Mariner 0 80 1 1292 161 56 14 chr17 15356520 15356709 -74147844 - L1MB2 LINE L1 -240 5931 5725 574 329 25 16 chr17 15357327 15357579 -74146974 - MIR SINE MIR -6 256 3 377 202 17 17 chr17 15358946 15359065 -74145488 + CT-rich Low_complexity Low_complexity 1 119 0 526 131 84 82 chr17 15359420 15359613 -74144940 + MER21B LTR ERV1 680 861 -2 1969 239 18 22 chr17 15360367 15360874 -74143679 - LTR31 LTR ERV1 0 619 115 2122 129 0 3 chr17 15361275 15361585 -74142968 - AluSc SINE Alu 0 309 1 415 200 29 7 chr17 15361852 15361992 -74142561 + (TG)n Simple_repeat Simple_repeat 2 144 0 430 339 107 43 chr17 15362149 15362709 -74141844 + L3 LINE CR1 981 1576 -1 185 343 86 29 chr17 15363927 15364032 -74140521 + L2 LINE L2 3154 3264 -8 217 292 0 0 chr17 15364742 15364790 -74139763 + L2 LINE L2 3185 3232 -40 405 0 0 0 chr17 15365298 15365343 -74139210 + (CA)n Simple_repeat Simple_repeat 2 46 0 512 339 131 30 chr17 15365530 15365862 -74138691 + L2 LINE L2 2059 2356 -958 1811 132 0 33 chr17 15365862 15366134 -74138419 - AluSx SINE Alu -16 296 34 512 339 131 30 chr17 15366134 15366600 -74137953 + L2 LINE L2 2356 2938 -376 257 270 0 14 chr17 15366742 15366816 -74137737 + MER63 DNA MER1_type 983 1055 -5 592 296 62 33 chr17 15366900 15367174 -74137379 + L2 LINE L2 3029 3310 -3 1118 89 0 6 chr17 15367421 15367579 -74136974 + L1MA1 LINE L1 6146 6302 0 322 262 60 0 chr17 15369099 15369183 -74135370 + MIR SINE MIR 60 148 -60 305 231 231 0 chr17 15369290 15369411 -74135142 + Charlie8 DNA MER1_type 61 209 -2208 398 145 14 0 chr17 15369640 15369709 -74134844 - MIR SINE MIR -10 252 183 189 250 59 59 chr17 15369812 15369880 -74134673 + MIR SINE MIR 33 100 -162 295 23 45 0 chr17 15369921 15369965 -74134588 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 1315 212 60 106 chr17 15369975 15370493 -74134060 - L1ME2 LINE L1 -10 6154 5661 323 303 28 28 chr17 15370494 15370639 -74133914 + MIR SINE MIR 118 262 0 358 283 39 11 chr17 15371883 15372063 -74132490 - L1ME4a LINE L1 -227 5894 5710 1756 201 44 16 chr17 15372396 15372851 -74131702 + L1MB7 LINE L1 5693 6159 -25 234 160 0 0 chr17 15373801 15373851 -74130702 + (CAT)n Simple_repeat Simple_repeat 2 51 0 180 0 0 0 chr17 15374461 15374481 -74130072 + (GGA)n Simple_repeat Simple_repeat 1 20 0 1080 158 16 0 chr17 15374665 15374849 -74129704 + MSTA LTR MaLR 242 428 0 5591 150 9 5 chr17 15374955 15376618 -74127935 + L1PB1 LINE L1 4126 5792 -359 246 173 0 53 chr17 15376618 15376693 -74127860 + (TA)n Simple_repeat Simple_repeat 1 71 0 2542 104 3 3 chr17 15376702 15377057 -74127496 + L1PB1 LINE L1 5791 6145 -6 24 67 0 0 chr17 15378143 15378188 -74126365 + AT_rich Low_complexity Low_complexity 1 45 0 326 70 0 53 chr17 15378264 15378321 -74126232 + L1PB1 LINE L1 6098 6151 0 22 56 0 0 chr17 15378493 15378529 -74126024 + AT_rich Low_complexity Low_complexity 1 36 0 503 306 0 0 chr17 15378576 15378700 -74125853 + MER5B DNA MER1_type 1 124 -54 2500 47 0 7 chr17 15378700 15378997 -74125556 - AluY SINE Alu -16 295 1 804 45 0 36 chr17 15379023 15379134 -74125419 + AluY SINE Alu 204 310 -1 222 196 0 43 chr17 15379136 15379182 -74125371 - MER5B DNA MER1_type -134 44 1 710 279 45 38 chr17 15379400 15379819 -74124734 - L1MDa LINE L1 -3558 2982 2561 390 235 43 71 chr17 15379825 15380080 -74124473 - L1MDa LINE L1 -4026 2514 2267 2457 79 0 0 chr17 15380099 15380402 -74124151 - AluY SINE Alu -8 303 1 183 254 0 0 chr17 15380557 15380620 -74123933 + T-rich Low_complexity Low_complexity 2 64 0 785 207 101 24 chr17 15380656 15380864 -74123689 + MIR SINE MIR 8 231 -31 327 296 105 17 chr17 15381331 15381503 -74123050 - HAL1 LINE L1 -847 1660 1474 204 179 0 0 chr17 15381839 15381878 -74122675 + (ATG)n Simple_repeat Simple_repeat 1 39 0 242 233 82 0 chr17 15382088 15382161 -74122392 + MIR3 SINE MIR 87 165 -43 822 227 55 81 chr17 15382308 15382705 -74121848 - L1ME1 LINE L1 -9 6157 5768 206 293 69 0 chr17 15382762 15382820 -74121733 + L2 LINE L2 3211 3272 0 306 356 34 7 chr17 15383146 15383295 -74121258 + MIR3 SINE MIR 45 197 -11 260 299 140 19 chr17 15384452 15384559 -74119994 + MIR3 SINE MIR 67 186 -22 447 19 0 0 chr17 15384682 15384734 -74119819 + (TG)n Simple_repeat Simple_repeat 2 53 0 317 276 105 86 chr17 15385027 15385352 -74119201 + HAL1b LINE L1 1 257 -1091 245 175 16 79 chr17 15385399 15385473 -74119080 + HAL1 LINE L1 1425 1489 -1018 2034 152 3 0 chr17 15385473 15385769 -74118784 + AluSq SINE Alu 1 297 -16 245 175 16 79 chr17 15385769 15385820 -74118733 + HAL1 LINE L1 1489 1542 -965 2194 152 106 2 chr17 15385875 15386357 -74118196 - L1MA9 LINE L1 0 6312 5781 456 51 0 0 chr17 15386368 15386427 -74118126 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 1752 233 31 12 chr17 15386460 15387048 -74117505 - L1 LINE L1 -2802 3232 2634 1296 99 6 0 chr17 15387057 15387228 -74117325 + AluSp SINE Alu 130 301 -12 2420 264 56 31 chr17 15387228 15388246 -74116307 - L1 LINE L1 -3397 2637 1646 2206 88 10 14 chr17 15388246 15388543 -74116010 + AluSg SINE Alu 1 296 -14 2420 264 56 31 chr17 15388543 15390818 -74113735 - L1 LINE L1 -4388 1646 13 283 268 10 21 chr17 15390827 15390924 -74113629 + HAL1 LINE L1 1578 1673 -834 2292 106 0 3 chr17 15390955 15391257 -74113296 - AluSq SINE Alu -12 301 1 336 245 69 31 chr17 15391562 15391721 -74112832 + L1MDa LINE L1 2471 2635 -3905 337 325 56 25 chr17 15391782 15391979 -74112574 + L1MDa LINE L1 3996 4198 -2342 24 53 0 0 chr17 15392064 15392102 -74112451 + AT_rich Low_complexity Low_complexity 1 38 0 553 272 120 51 chr17 15392110 15392426 -74112127 + L1MDa LINE L1 4271 4608 -1932 566 294 104 40 chr17 15392550 15393037 -74111516 + L1MDa LINE L1 5160 5615 -949 839 133 0 44 chr17 15393037 15393172 -74111381 + FLAM_C SINE Alu 1 129 -4 566 294 104 40 chr17 15393172 15393790 -74110763 + L1MDa LINE L1 5615 6324 -240 240 250 0 0 chr17 15394027 15394079 -74110474 + GA-rich Low_complexity Low_complexity 3 54 0 487 220 10 0 chr17 15394229 15394329 -74110224 + MER5A DNA MER1_type 9 109 -80 251 152 87 0 chr17 15395103 15395149 -74109404 - L2 LINE L2 0 3313 3264 320 307 63 0 chr17 15395153 15395280 -74109273 + MIR SINE MIR 72 206 -56 2736 89 23 105 chr17 15395694 15396178 -74108375 - MLT2A1 LTR ERVL 0 444 1 2182 110 0 0 chr17 15396227 15396533 -74108020 - AluSx SINE Alu 0 306 1 208 195 0 46 chr17 15396564 15396651 -74107902 + GA-rich Low_complexity Low_complexity 2 84 0 342 0 0 0 chr17 15396889 15396927 -74107626 + (CA)n Simple_repeat Simple_repeat 2 39 0 232 154 31 46 chr17 15396973 15397038 -74107515 + CT-rich Low_complexity Low_complexity 4 67 0 418 301 59 7 chr17 15398134 15398287 -74106266 + MIR SINE MIR 24 184 -78 269 290 60 30 chr17 15398612 15398712 -74105841 + MIR SINE MIR 17 119 -89 341 295 16 52 chr17 15399755 15399958 -74104595 + MIR SINE MIR 38 231 -31 455 294 153 24 chr17 15401482 15401822 -74102731 + L2 LINE L2 1729 2112 -1202 241 275 162 18 chr17 15401848 15402014 -74102539 - MIR SINE MIR -40 222 25 459 270 20 83 chr17 15402480 15402641 -74101912 - MIR SINE MIR -21 241 94 1980 112 24 17 chr17 15402641 15402958 -74101595 - AluSx SINE Alu 0 312 1 459 270 20 83 chr17 15402958 15403000 -74101553 - MIR SINE MIR -168 94 51 2061 136 3 0 chr17 15403446 15403741 -74100812 - AluSx SINE Alu -16 296 1 311 385 63 25 chr17 15404955 15405194 -74099359 - L2 LINE L2 -21 3251 3004 298 339 43 9 chr17 15406137 15406252 -74098301 - MIR3 SINE MIR -14 194 76 2326 91 3 0 chr17 15406518 15406814 -74097739 - AluSc SINE Alu -12 297 1 215 211 28 42 chr17 15406941 15407012 -74097541 - L2 LINE L2 0 3272 3203 269 273 264 8 chr17 15407056 15407177 -74097376 - LTR67 LTR ERVL -396 161 10 1140 310 71 51 chr17 15408390 15409860 -74094693 + L1MEd LINE L1 5 1540 -4770 6052 102 22 1 chr17 15409875 15411364 -74093189 - L1PA8 LINE L1 -1 6171 4660 2609 102 31 26 chr17 15411364 15411786 -74092767 + L1PA8 LINE L1 4208 4631 -1515 329 298 16 0 chr17 15411787 15411908 -74092645 + L1MEd LINE L1 1532 1654 -4656 228 250 0 0 chr17 15412283 15412335 -74092218 + A-rich Low_complexity Low_complexity 4 55 0 237 367 76 26 chr17 15412345 15412609 -74091944 - LTR16C LTR ERVL -11 480 204 338 346 147 0 chr17 15413169 15413325 -74091228 - MIR3 SINE MIR -15 193 15 864 231 84 5 chr17 15413338 15413541 -74091012 - MER58A DNA MER1_type -5 219 1 183 80 0 0 chr17 15414390 15414415 -74090138 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 250 86 0 0 chr17 15415118 15415153 -74089400 + MLT1F1 LTR MaLR 68 102 -465 2569 188 13 44 chr17 15415153 15415770 -74088783 + L1MD3 LINE L1 7390 7987 -8 2285 86 3 3 chr17 15415774 15416066 -74088487 + AluSc SINE Alu 1 292 -17 1284 290 114 52 chr17 15416824 15416926 -74087627 + L2 LINE L2 2467 2561 -752 4356 97 12 54 chr17 15416926 15417614 -74086939 - L1PA13 LINE L1 -4 6159 5501 1284 290 114 52 chr17 15417614 15418309 -74086244 + L2 LINE L2 2561 3312 -1 330 355 19 0 chr17 15419088 15419195 -74085358 + MIR SINE MIR 6 114 -148 494 332 64 57 chr17 15420627 15421034 -74083519 - MLT1J LTR MaLR 0 511 102 180 255 39 20 chr17 15421089 15421140 -74083413 - L3 LINE CR1 -1078 499 448 12246 213 61 35 chr17 15421483 15423005 -74081548 - L1M2 LINE L1 -743 5227 3747 459 0 0 0 chr17 15423005 15423056 -74081497 + (TTTC)n Simple_repeat Simple_repeat 1 51 0 12246 213 61 35 chr17 15423056 15426622 -74077931 - L1M2 LINE L1 -2223 3747 316 242 29 29 0 chr17 15427270 15427305 -74077248 + (TG)n Simple_repeat Simple_repeat 1 36 0 252 130 0 0 chr17 15427305 15427351 -74077202 + (GA)n Simple_repeat Simple_repeat 2 47 0 2295 87 3 13 chr17 15427578 15427878 -74076675 + AluY SINE Alu 1 297 -14 303 289 168 13 chr17 15428373 15428522 -74076031 + HAL1 LINE L1 2250 2421 -86 407 298 60 42 chr17 15428738 15428906 -74075647 + MIR SINE MIR 86 256 -6 391 130 29 0 chr17 15430693 15430762 -74073791 + L1PA10 LINE L1 6096 6166 -2 947 260 64 57 chr17 15430811 15431215 -74073338 - MLT1I LTR MaLR -2 407 1 1581 230 38 53 chr17 15434739 15435208 -74069345 - MLT1C LTR MaLR 0 467 6 2313 115 0 0 chr17 15435373 15435685 -74068868 - AluSx SINE Alu 0 312 1 640 199 0 38 chr17 15436258 15436389 -74068164 - FLAM_A SINE Alu -7 126 1 2920 97 0 42 chr17 15436417 15436581 -74067972 - MER57B LTR ERV1 0 434 265 2055 110 3 7 chr17 15436581 15436871 -74067682 + AluSx SINE Alu 3 291 -21 2920 97 0 42 chr17 15436871 15437158 -74067395 - MER57B LTR ERV1 -169 265 2 288 236 48 91 chr17 15438702 15438867 -74065686 - L1MC5 LINE L1 -562 7399 7242 227 274 63 53 chr17 15439052 15439242 -74065311 - L1MC5 LINE L1 -770 7191 7000 2003 122 0 0 chr17 15439556 15439827 -74064726 + AluSx SINE Alu 35 305 -7 946 222 87 64 chr17 15439924 15440456 -74064097 - L1MC5 LINE L1 -89 7872 7329 251 109 0 0 chr17 15440493 15440539 -74064014 + LTR66 LTR ERVL 394 439 -171 1286 214 19 89 chr17 15440551 15441036 -74063517 - L1MC5 LINE L1 -661 7300 6850 2248 144 75 8 chr17 15441052 15441454 -74063099 - LTR47A LTR ERVL -23 429 1 755 217 58 5 chr17 15441476 15441665 -74062888 - L1MC5 LINE L1 -1129 6832 6634 21 0 0 0 chr17 15441802 15441823 -74062730 + AT_rich Low_complexity Low_complexity 1 21 0 228 313 0 52 chr17 15441835 15441950 -74062603 - L1M4 LINE L1 -2014 4132 4024 30 0 0 0 chr17 15441998 15442028 -74062525 + AT_rich Low_complexity Low_complexity 1 30 0 36 0 0 0 chr17 15442054 15442090 -74062463 + AT_rich Low_complexity Low_complexity 1 36 0 1690 130 35 7 chr17 15442341 15442626 -74061927 - L1PA16 LINE L1 -9 6157 5865 2274 116 3 3 chr17 15443111 15443422 -74061131 - AluSq SINE Alu -2 311 1 21 36 0 0 chr17 15443739 15443767 -74060786 + AT_rich Low_complexity Low_complexity 1 28 0 197 256 0 13 chr17 15443900 15443978 -74060575 + T-rich Low_complexity Low_complexity 4 80 0 258 316 18 0 chr17 15444372 15444486 -74060067 - MER103 DNA DNA -49 117 2 684 0 0 0 chr17 15445142 15445218 -74059335 + (CAATA)n Simple_repeat Simple_repeat 4 79 0 195 344 244 0 chr17 15445251 15445341 -74059212 + MIR SINE MIR 36 147 -61 479 241 46 73 chr17 15445483 15445744 -74058809 - MER112 DNA MER1_type -5 255 2 533 284 87 41 chr17 15445753 15446475 -74058078 - L1ME LINE L1 -515 5649 4890 1465 264 109 28 chr17 15446832 15447556 -74056997 - MER20B DNA MER1_type -1 783 1 1295 182 113 46 chr17 15449202 15449527 -74055026 - MLT1A1 LTR MaLR -1 389 1 1836 153 80 58 chr17 15451326 15451691 -74052862 - MLT1A2 LTR MaLR -1 373 1 567 275 87 45 chr17 15452141 15452428 -74052125 + HAL1 LINE L1 2206 2504 -3 1495 218 97 47 chr17 15453075 15453520 -74051033 - MLT1C LTR MaLR 0 467 1 21 0 0 0 chr17 15453785 15453806 -74050747 + AT_rich Low_complexity Low_complexity 1 21 0 3110 55 3 13 chr17 15453832 15454216 -74050337 + L1PA5 LINE L1 5769 6148 -6 7557 167 29 17 chr17 15454222 15455721 -74048832 + L1PA14 LINE L1 3890 5422 -739 1976 158 0 10 chr17 15455721 15456024 -74048529 + AluSx SINE Alu 1 300 -12 7557 167 29 17 chr17 15456024 15456773 -74047780 + L1PA14 LINE L1 5422 6160 -1 225 0 0 0 chr17 15457498 15457523 -74047030 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 688 296 109 17 chr17 15458660 15459072 -74045481 + L1ME4a LINE L1 5603 6052 -69 328 337 112 0 chr17 15459350 15459519 -74045034 + MIR SINE MIR 67 254 -8 274 259 83 19 chr17 15460808 15460916 -74043637 - MIR3 SINE MIR -6 202 88 239 246 33 0 chr17 15461044 15461105 -74043448 - L2 LINE L2 -5 3308 3246 338 326 38 27 chr17 15461122 15461306 -74043247 + MIR SINE MIR 6 191 -71 181 362 0 0 chr17 15461387 15461434 -74043119 - L2 LINE L2 -86 3186 3140 2525 64 0 16 chr17 15462004 15462315 -74042238 - AluY SINE Alu -5 306 1 25 51 0 0 chr17 15462826 15462865 -74041688 + AT_rich Low_complexity Low_complexity 1 39 0 222 118 59 0 chr17 15462935 15462986 -74041567 + (TA)n Simple_repeat Simple_repeat 2 55 0 1515 208 88 67 chr17 15463049 15463241 -74041312 + L1MC4 LINE L1 6646 6833 -1209 2183 82 32 3 chr17 15463241 15463523 -74041030 - AluY SINE Alu -21 290 1 1515 208 88 67 chr17 15463523 15463864 -74040689 + L1MC4 LINE L1 6833 7190 -852 959 296 79 7 chr17 15463885 15464290 -74040263 - L1MC4a LINE L1 -178 7630 7197 301 365 68 10 chr17 15465013 15465205 -74039348 - MIR SINE MIR -9 253 51 312 363 20 27 chr17 15465586 15465732 -74038821 - MIR3 SINE MIR -28 180 36 23 54 0 0 chr17 15465885 15465922 -74038631 + AT_rich Low_complexity Low_complexity 1 37 0 403 235 135 0 chr17 15465967 15466102 -74038451 - L1MB7 LINE L1 -10 6174 6015 598 278 47 71 chr17 15466107 15466362 -74038191 - MIR SINE MIR -1 261 13 249 237 17 0 chr17 15467786 15467845 -74036708 - MIR SINE MIR -6 256 197 784 182 8 0 chr17 15467891 15468012 -74036541 + FLAM_C SINE Alu 1 122 -11 27 29 0 0 chr17 15468013 15468047 -74036506 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr17 15468245 15468268 -74036285 + AT_rich Low_complexity Low_complexity 1 23 0 705 278 65 42 chr17 15468337 15468741 -74035812 + L1ME LINE L1 5276 5685 -436 2659 45 0 0 chr17 15468987 15469295 -74035258 - AluY SINE Alu -3 308 1 1573 203 28 19 chr17 15471467 15471788 -74032765 + Tigger7 DNA MER2_type 2 325 -408 329 193 145 0 chr17 15471778 15471861 -74032692 + Tigger7 DNA MER2_type 2393 2487 0 * 1890 186 19 38 chr17 15471943 15472313 -74032240 + MLT1A1 LTR MaLR 1 363 -2 1882 159 67 14 chr17 15473845 15474190 -74030363 - MLT1A1 LTR MaLR -2 363 1 28 91 0 0 chr17 15474755 15474832 -74029721 + AT_rich Low_complexity Low_complexity 1 77 0 234 289 173 56 chr17 15474938 15475119 -74029434 - L1MB7 LINE L1 -198 5923 5765 2043 113 0 3 chr17 15475119 15475437 -74029116 - AluSg SINE Alu 0 317 1 234 289 173 56 chr17 15475437 15475596 -74028957 - L1MB7 LINE L1 -356 5765 5542 578 230 103 0 chr17 15476136 15476262 -74028291 + Tigger3(Golem) DNA MER2_type 4 142 -2887 1572 151 8 12 chr17 15476274 15476533 -74028020 + Tigger3(Golem) DNA MER2_type 2771 3028 -1 218 307 102 57 chr17 15476693 15476781 -74027772 + L2 LINE L2 3174 3265 -7 555 170 0 20 chr17 15476856 15476956 -74027597 - Tigger7 DNA MER2_type 0 2487 2390 1207 191 0 109 chr17 15476962 15477123 -74027430 - Tigger7 DNA MER2_type -2226 261 145 2291 113 3 0 chr17 15477123 15477434 -74027119 + AluSx SINE Alu 1 312 0 1207 191 0 109 chr17 15477434 15477565 -74026988 - Tigger7 DNA MER2_type -2342 145 1 1145 209 33 2 chr17 15477681 15478033 -74026520 + Charlie1 DNA MER1_type 1 2761 0 298 300 11 22 chr17 15478111 15478201 -74026352 - L2 LINE L2 0 3272 3184 189 326 97 28 chr17 15478275 15478419 -74026134 - L2 LINE L2 -333 2980 2827 1469 179 71 0 chr17 15478515 15478811 -74025742 - L1MB3 LINE L1 -2 6181 5865 29 28 0 0 chr17 15479108 15479144 -74025409 + AT_rich Low_complexity Low_complexity 1 36 0 851 234 27 5 chr17 15479498 15479682 -74024871 - MER5A DNA MER1_type 0 189 2 296 216 64 105 chr17 15480715 15480842 -74023711 - MER67D LTR ERV1 -2 541 421 2206 110 0 0 chr17 15480842 15481141 -74023412 - AluSc SINE Alu -10 299 1 296 216 64 105 chr17 15481141 15481184 -74023369 - MER67D LTR ERV1 -122 421 378 180 0 0 0 chr17 15481185 15481205 -74023348 + (A)n Simple_repeat Simple_repeat 1 20 0 303 331 16 16 chr17 15481308 15481432 -74023121 - MER67B LTR ERV1 -500 161 38 243 178 0 110 chr17 15481466 15481539 -74023014 - MIR SINE MIR -155 107 43 253 403 52 0 chr17 15482469 15482603 -74021950 - MIR SINE MIR -38 224 84 264 288 44 79 chr17 15482625 15482854 -74021699 + L2 LINE L2 2991 3211 -102 2082 133 0 3 chr17 15482872 15483165 -74021388 + AluSx SINE Alu 1 292 -20 521 214 61 46 chr17 15483174 15483305 -74021248 - MER5A DNA MER1_type -53 136 4 268 291 35 12 chr17 15483369 15483455 -74021098 + L2 LINE L2 3185 3272 0 4532 116 317 36 chr17 15483818 15484816 -74019737 + MER52C LTR ERV1 1 1278 0 192 331 127 28 chr17 15485038 15485180 -74019373 + L2 LINE L2 3117 3272 0 234 250 12 48 chr17 15485253 15485337 -74019216 + MIR SINE MIR 172 252 -10 1871 152 0 26 chr17 15485752 15485888 -74018665 + AluSx SINE Alu 1 139 -173 2247 86 0 4 chr17 15485888 15486218 -74018335 + AluSg SINE Alu 1 329 0 1871 152 0 26 chr17 15486218 15486389 -74018164 + AluSx SINE Alu 139 301 -11 2132 76 10 24 chr17 15486429 15486767 -74017786 - AluSp SINE Alu 0 334 1 643 198 9 0 chr17 15486802 15486913 -74017640 + MER5A DNA MER1_type 4 115 -74 234 277 141 67 chr17 15486913 15487062 -74017491 - MIR SINE MIR -90 172 22 281 237 252 0 chr17 15487277 15487416 -74017137 - MER5A DNA MER1_type -6 183 10 202 214 0 24 chr17 15487542 15487584 -74016969 + GA-rich Low_complexity Low_complexity 1 41 0 299 331 154 37 chr17 15488657 15488763 -74015790 + L2 LINE L2 2866 2958 -314 2593 49 0 3 chr17 15488763 15489069 -74015484 - AluY SINE Alu -6 305 1 299 331 154 37 chr17 15489069 15489312 -74015241 + L2 LINE L2 2958 3256 -16 492 263 75 38 chr17 15489679 15489892 -74014661 - LTR16C LTR ERVL 0 491 271 1245 169 44 32 chr17 15489924 15490173 -74014380 - L1ME LINE L1 -389 5777 5526 2268 246 75 27 chr17 15490234 15491050 -74013503 - L1ME LINE L1 -931 5215 4361 607 82 31 31 chr17 15491488 15491585 -74012968 + AluY SINE Alu 2 98 -213 2281 85 34 3 chr17 15491793 15492086 -74012467 + AluY SINE Alu 1 302 -9 623 40 40 0 chr17 15492089 15492165 -74012388 + MADE1 DNA Mariner 1 79 -1 515 184 76 89 chr17 15492290 15492448 -74012105 + MLT1F1 LTR MaLR 412 567 0 435 268 39 0 chr17 15492484 15492611 -74011942 - MIR SINE MIR -13 249 118 605 215 35 113 chr17 15492738 15492980 -74011573 + MER106B DNA MER1_type 2 236 0 277 269 45 60 chr17 15493682 15493816 -74010737 - MIR3 SINE MIR -74 134 3 1051 188 121 21 chr17 15494326 15494566 -74009987 - MER45B DNA AcHobo 0 1040 777 6889 114 13 4 chr17 15494567 15495699 -74008854 + L1MA5A LINE L1 5156 6297 0 3480 203 97 14 chr17 15495703 15496428 -74008125 - MER45B DNA AcHobo -255 785 1 446 290 90 7 chr17 15496570 15496715 -74007838 - MER5B DNA MER1_type -5 173 17 1384 209 14 37 chr17 15497317 15497613 -74006940 + AluJo SINE Alu 2 290 -12 259 270 138 57 chr17 15497709 15497868 -74006685 - MER5B DNA MER1_type 0 178 7 276 250 159 0 chr17 15497975 15498063 -74006490 - L1ME4a LINE L1 -56 6065 5964 2319 104 0 0 chr17 15498200 15498509 -74006044 - AluSc SINE Alu 0 309 1 21 0 0 0 chr17 15498519 15498540 -74006013 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr17 15498568 15498603 -74005950 + AT_rich Low_complexity Low_complexity 1 35 0 507 344 108 38 chr17 15498606 15499086 -74005467 + L2 LINE L2 2121 2634 -680 1866 174 0 3 chr17 15499207 15499517 -74005036 + AluJb SINE Alu 1 309 -3 2387 55 3 52 chr17 15499807 15500133 -74004420 + AluY SINE Alu 1 310 -1 865 228 61 105 chr17 15500343 15500873 -74003680 + L1M4 LINE L1 3873 4376 -1770 2097 144 0 7 chr17 15500873 15501179 -74003374 + AluJo SINE Alu 1 304 -8 865 228 61 105 chr17 15501179 15501236 -74003317 + L1M4 LINE L1 4376 4434 -1712 566 237 0 0 chr17 15501319 15501433 -74003120 + L2 LINE L2 2424 2537 -777 1185 205 146 10 chr17 15501482 15501784 -74002769 - MER2 DNA MER2_type -1 343 1 1144 239 135 88 chr17 15501876 15502511 -74002042 + LTR41 LTR ERVL 31 695 -78 277 242 15 0 chr17 15502600 15502666 -74001887 + LTR41 LTR ERVL 706 772 -1 255 388 0 0 chr17 15502668 15502748 -74001805 - LTR16C LTR ERVL -138 353 274 840 304 104 47 chr17 15503398 15503625 -74000928 - ERVL LTR ERVL -726 5038 4825 2234 92 7 23 chr17 15503625 15503793 -74000760 - AluSq SINE Alu -12 301 132 183 42 0 0 chr17 15503793 15503817 -74000736 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2221 78 4 0 chr17 15503817 15504098 -74000455 - AluY SINE Alu -29 282 1 2234 92 7 23 chr17 15504098 15504234 -74000319 - AluSq SINE Alu -179 134 1 840 304 104 47 chr17 15504234 15504304 -74000249 - ERVL LTR ERVL -939 4825 4760 760 236 44 6 chr17 15504304 15504486 -74000067 - MER5A DNA MER1_type 0 189 1 840 304 104 47 chr17 15504486 15504763 -73999790 - ERVL LTR ERVL -1004 4760 4430 855 252 36 65 chr17 15504891 15505169 -73999384 + L2 LINE L2 2533 2802 -512 2396 136 128 8 chr17 15507271 15507653 -73996900 + MSTA LTR MaLR 1 428 0 204 353 201 0 chr17 15507756 15507895 -73996658 + MIR SINE MIR 46 212 -50 541 240 24 16 chr17 15508058 15508183 -73996370 - MER5B DNA MER1_type -52 126 1 422 207 186 21 chr17 15508203 15508348 -73996205 + MER5A DNA MER1_type 18 186 -3 354 265 114 8 chr17 15508489 15508621 -73995932 - MIR SINE MIR -70 192 47 2049 209 93 28 chr17 15509562 15510068 -73994485 + MLT1F LTR MaLR 1 539 -3 463 294 78 80 chr17 15510201 15510599 -73993954 + L2 LINE L2 2856 3252 -61 814 204 11 11 chr17 15510665 15510841 -73993712 + FRAM SINE Alu 1 175 -1 289 298 39 19 chr17 15512067 15512171 -73992382 - MIR3 SINE MIR -1 207 102 1930 209 117 49 chr17 15514435 15515067 -73989486 - L1ME1 LINE L1 -21 6145 5471 373 137 10 75 chr17 15515109 15515419 -73989134 + (CATATA)n Simple_repeat Simple_repeat 1 289 0 321 160 50 26 chr17 15515421 15515726 -73988827 + (TA)n Simple_repeat Simple_repeat 1 312 0 3420 143 40 51 chr17 15515767 15516418 -73988135 - LTR48B LTR ERV1 0 644 1 830 193 40 0 chr17 15516459 15516609 -73987944 - FRAM SINE Alu -17 159 4 298 149 0 0 chr17 15516610 15516657 -73987896 - L1ME1 LINE L1 -719 5443 5397 6878 188 176 19 chr17 15516658 15518175 -73986378 + MER52A LTR ERV1 1 1755 0 1135 253 84 83 chr17 15518855 15519182 -73985371 - L1MC4 LINE L1 -92 7950 7625 2207 121 0 0 chr17 15519182 15519479 -73985074 - AluSx SINE Alu -15 297 1 1135 253 84 83 chr17 15519479 15520679 -73983874 - L1MC4 LINE L1 -417 7625 6428 368 231 36 159 chr17 15520741 15520992 -73983561 - L1MC4 LINE L1 -1862 5946 5727 1772 116 4 8 chr17 15521107 15521387 -73983166 - AluSx SINE Alu 0 311 33 296 342 21 12 chr17 15521448 15521688 -73982865 - L1 LINE L1 -1513 4633 4392 310 324 130 58 chr17 15521793 15522207 -73982346 + L2 LINE L2 2804 3247 -25 746 214 10 57 chr17 15522897 15523089 -73981464 - MER5A DNA MER1_type 0 189 7 180 0 0 0 chr17 15524268 15524288 -73980265 + (GA)n Simple_repeat Simple_repeat 2 21 0 188 226 48 32 chr17 15524457 15524519 -73980034 - MIR SINE MIR -119 143 81 270 318 0 0 chr17 15526162 15526250 -73978303 - MIR SINE MIR 0 262 175 209 375 14 0 chr17 15526331 15526403 -73978150 + L2 LINE L2 2742 2814 -500 2082 135 16 97 chr17 15526417 15526543 -73978010 + MER57A LTR ERV1 8 143 -260 1553 180 7 11 chr17 15526543 15526826 -73977727 - AluJb SINE Alu -24 288 7 2082 135 16 97 chr17 15526826 15527130 -73977423 + MER57A LTR ERV1 143 403 0 583 319 77 39 chr17 15527130 15527519 -73977034 + L2 LINE L2 2908 3311 -2 439 240 125 68 chr17 15527628 15527820 -73976733 + MER63A DNA MER1_type 4 206 -4 247 340 21 21 chr17 15528429 15528523 -73976030 - MIR SINE MIR -115 147 54 1027 157 0 6 chr17 15528673 15528832 -73975721 + AluJb SINE Alu 125 282 -30 198 0 0 0 chr17 15528834 15528856 -73975697 + (CA)n Simple_repeat Simple_repeat 2 23 0 283 311 68 17 chr17 15529505 15529682 -73974871 - L1MC5 LINE L1 -474 7487 7302 250 282 70 35 chr17 15530158 15530300 -73974253 + HAL1b LINE L1 765 911 -437 833 316 82 28 chr17 15530630 15531096 -73973457 - LTR16C LTR ERVL 0 491 1 3133 167 59 26 chr17 15531123 15531213 -73973340 - MER39B LTR ERV1 -4 649 563 2336 75 0 0 chr17 15531213 15531547 -73973006 - AluSc SINE Alu 0 334 1 3133 167 59 26 chr17 15531547 15531653 -73972900 - MER39B LTR ERV1 -90 563 462 2195 109 3 0 chr17 15531653 15531937 -73972616 + AluSx SINE Alu 1 285 -27 231 36 0 0 chr17 15531940 15531968 -73972585 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 3133 167 59 26 chr17 15531968 15532388 -73972165 - MER39B LTR ERV1 -192 461 6 3374 29 3 5 chr17 15532500 15532879 -73971674 - L1PA3 LINE L1 -3 6152 5775 404 282 32 51 chr17 15533280 15533436 -73971117 + L2 LINE L2 2945 3097 -216 583 290 38 6 chr17 15533527 15533710 -73970843 - LTR33 LTR ERVL -310 211 23 1831 289 42 20 chr17 15533710 15534240 -73970313 + MLT1H LTR MaLR 1 565 -2 2173 142 134 11 chr17 15535024 15535405 -73969148 - MSTA LTR MaLR 0 428 1 510 351 0 0 chr17 15535588 15535753 -73968800 - MIR3 SINE MIR -10 198 34 1758 108 46 81 chr17 15536040 15536363 -73968190 - AluJo SINE Alu 0 312 1 217 250 0 78 chr17 15536365 15536429 -73968124 - L2 LINE L2 -3 3310 3252 575 252 75 0 chr17 15536477 15536636 -73967917 - MLT1I LTR MaLR 0 409 239 21 0 0 0 chr17 15537539 15537560 -73966993 + AT_rich Low_complexity Low_complexity 1 21 0 240 239 114 42 chr17 15537587 15537754 -73966799 - L1ME4a LINE L1 -35 6086 5908 418 301 102 34 chr17 15538167 15538319 -73966234 - HAL1b LINE L1 -819 529 354 1199 133 133 15 chr17 15538319 15538514 -73966039 + MER20 DNA MER1_type 1 218 -1 418 301 102 34 chr17 15538514 15538597 -73965956 - HAL1b LINE L1 -994 354 278 3713 144 32 18 chr17 15539608 15540226 -73964327 + L1MB3 LINE L1 5557 6183 0 228 322 79 57 chr17 15540266 15540620 -73963933 + L1MCc LINE L1 33 394 -6029 * 5075 262 89 49 chr17 15540613 15540687 -73963866 + L1M4 LINE L1 2725 2795 -3351 1721 178 3 7 chr17 15540687 15540990 -73963563 + AluJb SINE Alu 1 302 -10 5075 262 89 49 chr17 15540990 15543270 -73961283 + L1M4 LINE L1 2795 5174 -972 785 128 8 0 chr17 15544227 15544352 -73960201 + AluSg/x SINE Alu 187 312 0 214 270 95 16 chr17 15544789 15544852 -73959701 + L2 LINE L2 3147 3214 -58 257 335 55 30 chr17 15544877 15545041 -73959512 + L2 LINE L2 2530 2697 -617 282 282 51 68 chr17 15545213 15545330 -73959223 - L2 LINE L2 0 3313 3199 585 275 70 88 chr17 15545446 15545900 -73958653 + LTR33A LTR ERVL 64 509 -14 435 196 142 20 chr17 15546262 15546333 -73958220 + LTR41 LTR ERVL 1 62 -711 1085 155 0 0 chr17 15546333 15546514 -73958039 - L1MA4 LINE L1 -3 6297 6117 435 196 142 20 chr17 15546514 15546590 -73957963 + LTR41 LTR ERVL 62 166 -607 916 255 27 75 chr17 15546721 15547094 -73957459 + LTR41 LTR ERVL 409 763 -10 1993 154 67 14 chr17 15547201 15547572 -73956981 - L1MC1 LINE L1 0 6333 5943 347 267 46 6 chr17 15547574 15547710 -73956843 + HERVL LTR ERVL 4688 4765 -889 306 282 47 0 chr17 15547864 15547949 -73956604 + LTR33A LTR ERVL 346 434 -89 354 282 45 86 chr17 15548047 15548292 -73956261 + L2 LINE L2 3079 3313 0 775 313 81 29 chr17 15548334 15548926 -73955627 + L1ME3 LINE L1 4560 5182 -964 193 143 71 48 chr17 15548991 15549033 -73955520 + MIR SINE MIR 152 194 -68 30 27 0 0 chr17 15549199 15549236 -73955317 + AT_rich Low_complexity Low_complexity 1 37 0 604 294 91 34 chr17 15549305 15549801 -73954752 + L1ME3 LINE L1 5306 5829 -333 7427 153 97 10 chr17 15550622 15550829 -73953724 - L1PA15 LINE L1 -40 6125 5937 2028 88 0 19 chr17 15550829 15551089 -73953464 + AluSg SINE Alu 39 293 -17 7427 153 97 10 chr17 15551089 15552334 -73952219 - L1PA15 LINE L1 -228 5937 4801 1946 156 3 10 chr17 15552334 15552648 -73951905 - AluSx SINE Alu 0 312 1 7427 153 97 10 chr17 15552648 15553547 -73951006 - L1PA15 LINE L1 -1364 4801 3507 2016 76 4 0 chr17 15553608 15553859 -73950694 + AluSg SINE Alu 37 288 -22 445 279 100 30 chr17 15554437 15554789 -73949764 - L1MC4a LINE L1 -1882 5926 5515 * 1541 238 3 20 chr17 15554784 15555141 -73949412 - L1 LINE L1 -1030 5116 4766 963 145 54 6 chr17 15555139 15555305 -73949248 + L1 LINE L1 3800 3973 -2173 * 1958 207 42 42 chr17 15555300 15555870 -73948683 + L1 LINE L1 4190 4759 -1387 543 252 70 68 chr17 15555918 15556347 -73948206 - L1MEc LINE L1 -2946 3436 3007 585 271 91 62 chr17 15556396 15556954 -73947599 - L1MEc LINE L1 -4553 1912 1254 1344 238 140 53 chr17 15557130 15557622 -73946931 + MLT1F LTR MaLR 8 542 0 2855 146 17 0 chr17 15557820 15558239 -73946314 + MSTB LTR MaLR 1 426 0 21 36 0 0 chr17 15558516 15558544 -73946009 + AT_rich Low_complexity Low_complexity 1 28 0 1062 168 5 41 chr17 15559687 15559883 -73944670 + MER5A DNA MER1_type 1 189 0 415 300 8 0 chr17 15560783 15560903 -73943650 + MIR3 SINE MIR 70 190 -18 919 193 0 101 chr17 15561593 15561811 -73942742 + MER63A DNA MER1_type 8 203 -7 448 301 41 0 chr17 15561819 15561965 -73942588 - MIR SINE MIR -110 152 1 2128 93 4 4 chr17 15563740 15564019 -73940534 - AluSg SINE Alu -31 279 1 876 167 119 0 chr17 15564203 15564371 -73940182 - MER5A DNA MER1_type -1 188 1 904 250 17 30 chr17 15564891 15565127 -73939426 - MIR SINE MIR -22 240 8 689 279 6 12 chr17 15565169 15565341 -73939212 + MER5B DNA MER1_type 8 178 0 2279 88 3 31 chr17 15565399 15565717 -73938836 - AluSg SINE Alu -1 309 1 187 293 61 40 chr17 15566539 15566638 -73937915 - MIR SINE MIR -112 150 50 975 201 17 0 chr17 15566655 15566829 -73937724 - MER45A DNA AcHobo -1 177 1 455 245 10 0 chr17 15566843 15566941 -73937612 + MER5A DNA MER1_type 7 105 -84 2976 141 44 96 chr17 15567188 15567805 -73936748 + LTR12 LTR ERV1 1 585 -129 2050 185 31 83 chr17 15567922 15568250 -73936303 - LTR32 LTR ERVL 0 471 128 1763 83 147 4 chr17 15568250 15568502 -73936051 + AluSg SINE Alu 1 288 -22 2050 185 31 83 chr17 15568502 15568610 -73935943 - LTR32 LTR ERVL -343 128 60 2479 81 0 0 chr17 15568610 15568918 -73935635 - AluY SINE Alu -3 308 1 2050 185 31 83 chr17 15568918 15568962 -73935591 - LTR32 LTR ERVL -411 60 15 2098 203 123 0 chr17 15569316 15569764 -73934789 + MLT1D LTR MaLR 3 505 0 485 286 78 19 chr17 15570377 15570531 -73934022 + MER5B DNA MER1_type 1 163 -15 2713 124 8 0 chr17 15572300 15572670 -73931883 + THE1C LTR MaLR 1 373 -2 27 73 0 0 chr17 15572748 15572803 -73931750 + AT_rich Low_complexity Low_complexity 1 55 0 342 141 127 0 chr17 15572911 15572982 -73931571 + MLT1A1 LTR MaLR 75 154 -211 1182 150 73 5 chr17 15572986 15573206 -73931347 + L1MA8 LINE L1 6003 6237 -54 882 198 71 19 chr17 15573241 15573453 -73931100 + MLT1A1 LTR MaLR 140 362 -3 3019 128 46 51 chr17 15574336 15574453 -73930100 - L1MA5A LINE L1 0 6297 6181 2468 83 0 3 chr17 15574453 15574765 -73929788 - AluY SINE Alu 0 311 1 3019 128 46 51 chr17 15574765 15575216 -73929337 - L1MA5A LINE L1 -116 6181 5732 2217 107 0 7 chr17 15576607 15576898 -73927655 + AluSc SINE Alu 1 289 -20 2832 16 0 0 chr17 15577095 15577403 -73927150 - AluYa5 SINE Alu -3 308 1 617 261 179 28 chr17 15577573 15577925 -73926628 - MLT1F LTR MaLR -3 539 135 184 212 30 15 chr17 15578016 15578082 -73926471 + GA-rich Low_complexity Low_complexity 2 68 0 403 233 87 10 chr17 15578237 15578340 -73926213 - MIR SINE MIR -63 145 35 187 266 65 129 chr17 15578320 15578444 -73926109 - MER5B DNA MER1_type -62 116 1 * 445 134 0 0 chr17 15579903 15579970 -73924583 + L1MB7 LINE L1 6054 6120 -64 1095 150 21 27 chr17 15580234 15580421 -73924132 - L1PA16 LINE L1 -1 6165 5980 790 273 48 17 chr17 15580757 15580988 -73923565 + MIR SINE MIR 14 251 -11 252 59 0 0 chr17 15581092 15581126 -73923427 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 1105 189 38 14 chr17 15581143 15581355 -73923198 - AluJo SINE Alu -10 302 86 420 280 140 40 chr17 15581356 15581656 -73922897 + L1MC4a LINE L1 5582 5911 -1897 24 32 0 0 chr17 15581667 15581698 -73922855 + AT_rich Low_complexity Low_complexity 1 31 0 637 317 77 39 chr17 15582862 15583111 -73921442 + L2 LINE L2 2931 3200 -113 264 59 0 0 chr17 15583111 15583145 -73921408 + (CA)n Simple_repeat Simple_repeat 2 35 0 637 317 77 39 chr17 15583145 15583258 -73921295 + L2 LINE L2 3200 3307 -6 207 0 0 0 chr17 15584334 15584357 -73920196 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 200 133 0 0 chr17 15584709 15584739 -73919814 - MER5A DNA MER1_type -156 33 4 307 381 32 0 chr17 15584804 15584930 -73919623 - L2 LINE L2 0 3272 3143 250 378 49 5 chr17 15585158 15585343 -73919210 - L2 LINE L2 -402 2912 2720 234 128 0 0 chr17 15585379 15585418 -73919135 + (TG)n Simple_repeat Simple_repeat 2 40 0 361 272 112 88 chr17 15585449 15585502 -73919051 - L2 LINE L2 -837 2477 2427 2243 168 80 15 chr17 15585502 15585902 -73918651 - MSTB LTR MaLR 0 426 1 361 272 112 88 chr17 15585902 15586098 -73918455 - L2 LINE L2 -887 2427 2222 243 302 99 62 chr17 15586109 15586301 -73918252 + MIR SINE MIR 8 206 -56 308 279 266 34 chr17 15586345 15586984 -73917569 - L2 LINE L2 -1092 2222 1436 215 253 108 36 chr17 15587721 15587804 -73916749 + L2 LINE L2 3163 3251 -21 438 284 121 45 chr17 15588137 15588663 -73915890 - L1MC/D LINE L1 -317 5804 5232 198 0 0 0 chr17 15590050 15590072 -73914481 + (TTA)n Simple_repeat Simple_repeat 3 24 0 7410 52 11 0 chr17 15590072 15591184 -73913369 - L1PA7 LINE L1 -18 6136 5017 9254 84 13 0 chr17 15591185 15592426 -73912127 + L1PA7 LINE L1 3755 5011 -1135 259 237 13 53 chr17 15594338 15594414 -73910139 + MIR SINE MIR 13 85 -177 2011 230 101 12 chr17 15594484 15594980 -73909573 + MLT1F LTR MaLR 3 542 0 366 242 53 61 chr17 15596501 15596773 -73907780 + L1ME LINE L1 5455 5830 -291 1864 142 35 10 chr17 15597667 15597956 -73906597 + AluJb SINE Alu 1 296 -16 222 318 79 32 chr17 15598185 15598311 -73906242 + MIR SINE MIR 81 212 -50 450 305 76 25 chr17 15599254 15599490 -73905063 - L1ME LINE L1 -343 5778 5531 242 164 55 36 chr17 15600694 15600749 -73903804 + MER20B DNA MER1_type 88 143 -640 4721 203 71 28 chr17 15601134 15601582 -73902971 + L1M4 LINE L1 3897 4324 -1854 1615 170 0 42 chr17 15601582 15601893 -73902660 + AluSx SINE Alu 1 298 -14 4721 203 71 28 chr17 15601893 15602623 -73901930 + L1M4 LINE L1 4324 5021 -1157 2195 97 0 10 chr17 15602623 15602912 -73901641 + AluSx SINE Alu 1 286 -26 4721 203 71 28 chr17 15602912 15603024 -73901529 + L1M4 LINE L1 5021 5127 -1051 2339 159 20 32 chr17 15603024 15603463 -73901090 - Tigger2a DNA MER2_type 0 434 1 4721 203 71 28 chr17 15603463 15603868 -73900685 + L1M4 LINE L1 5127 5662 -516 354 278 68 15 chr17 15603870 15604003 -73900550 - MLT1I LTR MaLR -267 142 3 204 125 0 0 chr17 15604694 15604726 -73899827 + (TCCC)n Simple_repeat Simple_repeat 1 32 0 229 229 0 16 chr17 15604730 15604791 -73899762 + CT-rich Low_complexity Low_complexity 2 61 0 501 347 62 39 chr17 15605219 15605738 -73898815 + L2 LINE L2 2770 3304 -9 29 28 0 0 chr17 15606349 15606385 -73898168 + AT_rich Low_complexity Low_complexity 1 36 0 2381 91 0 0 chr17 15607535 15607832 -73896721 - AluSp SINE Alu -16 297 1 4177 213 56 43 chr17 15608411 15609335 -73895218 - L1M4 LINE L1 -5453 1089 148 405 0 0 0 chr17 15609335 15609380 -73895173 + (TG)n Simple_repeat Simple_repeat 1 45 0 4177 213 56 43 chr17 15609380 15609529 -73895024 - L1M4 LINE L1 -6394 148 2 962 251 138 3 chr17 15609536 15609914 -73894639 - L1ME LINE L1 -816 5330 4902 3724 224 50 13 chr17 15609936 15610128 -73894425 + L1MB4 LINE L1 4404 4588 -1592 207 0 0 0 chr17 15610128 15610151 -73894402 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2097 116 0 0 chr17 15610153 15610437 -73894116 - AluSg SINE Alu -26 284 1 3724 224 50 13 chr17 15610437 15610768 -73893785 + L1MB4 LINE L1 4588 4906 -1274 180 0 0 0 chr17 15610768 15610788 -73893765 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 3724 224 50 13 chr17 15610788 15611968 -73892585 + L1MB4 LINE L1 4906 6174 -6 459 120 0 0 chr17 15611997 15612072 -73892481 + L1MB8 LINE L1 6104 6178 0 2406 103 0 0 chr17 15612285 15612596 -73891957 - AluSq SINE Alu -2 311 1 12319 211 23 21 chr17 15612618 15615906 -73888647 - L1PA15-16 LINE L1 -835 6014 2719 2456 128 8 8 chr17 15615906 15616281 -73888272 - THE1C LTR MaLR 0 375 1 7255 115 198 44 chr17 15616281 15617650 -73886903 - THE1C-int LTR MaLR 0 1580 1 2426 103 35 16 chr17 15617650 15618018 -73886535 - THE1C LTR MaLR 0 375 1 11115 158 13 7 chr17 15618018 15620498 -73884055 - L1PA15-16 LINE L1 -4126 2723 5 1188 251 64 103 chr17 15620508 15621052 -73883501 - L1MEc LINE L1 -3113 3102 2538 249 108 0 0 chr17 15621052 15621089 -73883464 + (CA)n Simple_repeat Simple_repeat 2 38 0 1188 251 64 103 chr17 15621089 15622820 -73881733 - L1MEc LINE L1 -3677 2538 956 22 0 0 0 chr17 15622870 15622892 -73881661 + AT_rich Low_complexity Low_complexity 1 22 0 233 224 26 40 chr17 15622930 15623006 -73881547 - L1MEc LINE L1 -5475 730 656 438 333 41 54 chr17 15623343 15623658 -73880895 - L1MEc LINE L1 -5972 424 114 3066 247 56 24 chr17 15624066 15624344 -73880209 + L1MDa LINE L1 2061 2329 -4211 182 37 37 0 chr17 15624344 15624371 -73880182 + (TA)n Simple_repeat Simple_repeat 1 28 0 3066 247 56 24 chr17 15624371 15625520 -73879033 + L1MDa LINE L1 2329 3542 -2998 1869 130 20 0 chr17 15625711 15626011 -73878542 + L1PA13 LINE L1 5858 6163 0 437 249 69 40 chr17 15626169 15626342 -73878211 + HAL1b LINE L1 427 604 -744 2120 114 3 7 chr17 15626362 15626684 -73877869 - AluSx SINE Alu 0 312 1 45 62 0 0 chr17 15626803 15626883 -73877670 + AT_rich Low_complexity Low_complexity 1 80 0 2220 232 47 82 chr17 15627067 15628155 -73876398 + L1MC5 LINE L1 6476 7529 -432 311 250 29 93 chr17 15628243 15628441 -73876112 + L1ME3A LINE L1 5955 6137 -25 4379 159 47 34 chr17 15628612 15630179 -73874374 - L1PB4 LINE L1 -2 6154 4558 579 310 114 53 chr17 15630552 15630913 -73873640 + MLT1K LTR MaLR 189 571 -17 350 57 19 0 chr17 15631159 15631212 -73873341 + (GA)n Simple_repeat Simple_repeat 1 54 0 310 264 61 27 chr17 15631634 15631782 -73872771 - L1M4 LINE L1 -2268 3878 3726 27 49 0 0 chr17 15632069 15632110 -73872443 + AT_rich Low_complexity Low_complexity 1 41 0 2223 123 0 0 chr17 15632550 15632850 -73871703 - AluY SINE Alu -11 300 1 29 78 0 0 chr17 15632895 15632959 -73871594 + AT_rich Low_complexity Low_complexity 1 64 0 796 293 96 9 chr17 15633122 15633446 -73871107 + MLT1K LTR MaLR 208 559 -29 21 0 0 0 chr17 15634612 15634633 -73869920 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 15635650 15635671 -73868882 + AT_rich Low_complexity Low_complexity 1 21 0 2162 99 0 30 chr17 15639370 15639674 -73864879 + AluSg SINE Alu 1 295 -15 1215 174 54 9 chr17 15640065 15640289 -73864264 - MSTA LTR MaLR 0 428 195 1276 100 21 0 chr17 15640289 15640479 -73864074 - L1P LINE L1 -805 5341 5148 491 78 0 65 chr17 15640478 15640555 -73863998 + L1PA8A LINE L1 5836 5907 -224 * 1000 117 56 6 chr17 15640587 15640749 -73863804 - MSTA LTR MaLR -258 170 1 33 25 0 0 chr17 15640750 15640790 -73863763 + AT_rich Low_complexity Low_complexity 1 40 0 28 0 0 0 chr17 15641084 15641112 -73863441 + AT_rich Low_complexity Low_complexity 1 28 0 235 324 67 0 chr17 15642610 15642715 -73861838 + HAL1b LINE L1 452 563 -785 949 206 148 37 chr17 15642722 15643047 -73861506 - MER93b LTR ERV1 -1 372 12 251 308 0 13 chr17 15643195 15643273 -73861280 + L2 LINE L2 3234 3310 -3 213 121 0 0 chr17 15643726 15643759 -73860794 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 702 211 161 9 chr17 15643839 15644057 -73860496 - L1MB8 LINE L1 -9 6169 5919 717 286 18 0 chr17 15644745 15644972 -73859581 - L1ME3A LINE L1 -125 6045 5815 320 289 44 92 chr17 15645371 15645644 -73858909 + L1MB5 LINE L1 8 267 -6275 3830 241 27 46 chr17 15645827 15647522 -73857031 + L1MB5 LINE L1 498 2167 -4479 * 4659 225 48 40 chr17 15647519 15648337 -73856216 + L1MB5 LINE L1 4258 5068 -1604 2278 114 0 0 chr17 15648337 15648635 -73855918 - AluSx SINE Alu -14 298 1 567 186 8 54 chr17 15648635 15648764 -73855789 - AluJo/FLAM SINE Alu -179 123 1 4659 225 48 40 chr17 15648764 15648948 -73855605 + L1MB5 LINE L1 5068 5249 -1423 2552 150 16 41 chr17 15648948 15649461 -73855092 + L1MA7 LINE L1 5791 6290 -1 4659 225 48 40 chr17 15649461 15650337 -73854216 + L1MB5 LINE L1 5249 6166 -506 1941 143 0 29 chr17 15650337 15650644 -73853909 + AluSx SINE Alu 1 298 -14 4659 225 48 40 chr17 15650644 15651148 -73853405 + L1MB5 LINE L1 6166 6665 -7 203 136 45 0 chr17 15652497 15652541 -73852012 + CT-rich Low_complexity Low_complexity 3 48 0 349 182 111 30 chr17 15652667 15652766 -73851787 + MIR SINE MIR 156 262 0 233 182 0 0 chr17 15654497 15654541 -73850012 + MIR SINE MIR 206 249 -13 314 286 36 36 chr17 15655761 15655873 -73848680 - MIR SINE MIR -63 145 34 1062 247 80 21 chr17 15656023 15656400 -73848153 - HAL1b LINE L1 -739 609 211 470 340 82 10 chr17 15657190 15657384 -73847169 + MIR SINE MIR 53 260 -2 499 341 105 18 chr17 15658244 15658709 -73845844 - L2 LINE L2 -49 3264 2764 281 261 56 50 chr17 15659031 15659192 -73845361 + MIR3 SINE MIR 39 200 -8 212 333 45 0 chr17 15660068 15660134 -73844419 + MIR SINE MIR 12 80 -182 249 308 12 136 chr17 15660376 15660545 -73844008 - L2 LINE L2 -87 3185 3038 724 291 78 48 chr17 15660647 15660740 -73843813 + HAL1 LINE L1 1984 2073 -434 2285 62 38 0 chr17 15660740 15661028 -73843525 + AluY SINE Alu 1 299 -12 724 291 78 48 chr17 15661028 15661436 -73843117 + HAL1 LINE L1 2073 2500 -7 227 140 20 0 chr17 15661685 15661735 -73842818 + GA-rich Low_complexity Low_complexity 2 52 0 2135 141 0 0 chr17 15662211 15662509 -73842044 + AluSx SINE Alu 1 298 -14 2491 57 0 0 chr17 15663273 15663570 -73840983 + AluY SINE Alu 1 297 -14 305 318 147 28 chr17 15663582 15663834 -73840719 + HAL1b LINE L1 392 673 -675 23 0 0 0 chr17 15664981 15665004 -73839549 + AT_rich Low_complexity Low_complexity 1 23 0 457 355 58 24 chr17 15665611 15666025 -73838528 + HERV16 LTR ERVL 173 600 -4396 3639 344 77 24 chr17 15666878 15669426 -73835127 - HERV16 LTR ERVL -661 5103 2422 980 354 18 11 chr17 15669458 15669899 -73834654 - HERV16 LTR ERVL -3355 2299 1856 499 298 32 11 chr17 15669914 15670102 -73834451 - HERV16 LTR ERVL -4803 193 2 584 251 84 48 chr17 15670104 15670331 -73834222 - LTR16A1 LTR ERVL -1 456 222 522 263 136 24 chr17 15670539 15670752 -73833801 + MIR SINE MIR 23 259 -3 332 307 114 18 chr17 15671310 15671448 -73833105 + MIR3 SINE MIR 10 168 -40 692 212 49 87 chr17 15671448 15671632 -73832921 + MER5B DNA MER1_type 2 178 0 332 307 114 18 chr17 15671632 15671659 -73832894 + MIR3 SINE MIR 168 191 -17 1384 187 37 58 chr17 15671962 15672256 -73832297 + AluJo SINE Alu 1 288 -24 441 75 25 25 chr17 15672265 15672345 -73832208 + (GAAA)n Simple_repeat Simple_repeat 1 80 0 233 128 21 0 chr17 15672363 15672410 -73832143 + GA-rich Low_complexity Low_complexity 3 50 0 2217 205 49 107 chr17 15674088 15674313 -73830240 + MER21B LTR ERV1 25 262 -601 2329 97 0 7 chr17 15674313 15674612 -73829941 + AluSx SINE Alu 1 297 -15 213 39 0 0 chr17 15674612 15674638 -73829915 + (TA)n Simple_repeat Simple_repeat 2 27 0 2217 205 49 107 chr17 15674638 15675167 -73829386 + MER21B LTR ERV1 260 736 -127 25 0 0 0 chr17 15676094 15676119 -73828434 + AT_rich Low_complexity Low_complexity 1 25 0 2279 109 0 3 chr17 15676305 15676609 -73827944 + AluSq SINE Alu 1 303 -10 195 42 0 0 chr17 15676642 15676666 -73827887 + (TG)n Simple_repeat Simple_repeat 2 25 0 360 254 197 71 chr17 15676716 15677082 -73827471 + L1MC4a LINE L1 5943 6354 -1454 2345 201 64 100 chr17 15677310 15677789 -73826764 + L1MC5 LINE L1 6546 7041 -920 2145 119 0 0 chr17 15677789 15678106 -73826447 - AluSx SINE Alu 0 317 1 2345 201 64 100 chr17 15678106 15678320 -73826233 + L1MC5 LINE L1 7041 7261 -700 1120 213 52 0 chr17 15678320 15678531 -73826022 - MER58A DNA MER1_type -2 222 1 2345 201 64 100 chr17 15678531 15678867 -73825686 + L1MC5 LINE L1 7261 7545 -416 352 329 0 67 chr17 15681421 15681570 -73822983 + MIR SINE MIR 5 143 -119 3386 224 46 20 chr17 15681595 15682362 -73822191 + MER21B LTR ERV1 19 805 -58 275 317 30 0 chr17 15682384 15682485 -73822068 + MIR SINE MIR 159 262 0 2151 119 10 0 chr17 15682731 15683033 -73821520 + AluSx SINE Alu 1 305 -7 229 286 0 26 chr17 15683036 15683113 -73821440 - Charlie7 DNA MER1_type -49 2563 2489 * 309 278 93 13 chr17 15683086 15683237 -73821316 - Charlie7 DNA MER1_type -2448 164 2 349 340 58 47 chr17 15684632 15684823 -73819730 + MIR3 SINE MIR 11 203 -5 203 245 20 0 chr17 15685675 15685724 -73818829 + GA-rich Low_complexity Low_complexity 1 50 0 198 0 0 0 chr17 15685751 15685773 -73818780 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2331 106 0 0 chr17 15685776 15686078 -73818475 - AluSg SINE Alu -8 302 1 396 290 69 65 chr17 15686390 15686621 -73817932 - L2 LINE L2 -5 3308 3077 478 263 59 13 chr17 15686643 15686795 -73817758 + MIR SINE MIR 69 227 -35 580 239 33 33 chr17 15686806 15686990 -73817563 + MLT1F LTR MaLR 354 537 -5 2404 192 84 6 chr17 15687122 15687612 -73816941 - MER74A LTR ERVL -30 528 1 2251 116 0 0 chr17 15688680 15688973 -73815580 - AluSg SINE Alu -17 293 1 194 0 39 0 chr17 15688980 15689006 -73815547 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 223 266 165 13 chr17 15689381 15689460 -73815093 - L2 LINE L2 -7 3265 3175 1934 116 0 34 chr17 15689498 15689813 -73814740 - AluSg SINE Alu 0 305 1 191 281 88 0 chr17 15691181 15691238 -73813315 - MER5A DNA MER1_type -127 62 1 303 164 99 81 chr17 15691626 15691707 -73812846 + MER8 DNA MER2_type 1 84 -163 354 277 187 19 chr17 15692227 15692382 -73812171 + MER5A DNA MER1_type 9 189 0 279 241 379 9 chr17 15692384 15692500 -73812053 + MER5B DNA MER1_type 6 164 -14 656 212 20 86 chr17 15692506 15692704 -73811849 - MER5A DNA MER1_type 0 189 5 774 186 70 6 chr17 15692730 15692886 -73811667 + MER5A DNA MER1_type 20 185 -4 1966 145 7 16 chr17 15692887 15693191 -73811362 + AluJb SINE Alu 3 303 -9 249 167 0 0 chr17 15693428 15693482 -73811071 + (TA)n Simple_repeat Simple_repeat 2 55 0 776 203 98 6 chr17 15693716 15693879 -73810674 - MER5B DNA MER1_type 0 178 1 387 278 184 31 chr17 15693879 15694134 -73810419 + MLT1L LTR MaLR 148 441 -174 449 185 12 12 chr17 15695676 15695757 -73808796 + MER90 LTR ERV1 534 614 0 240 191 0 0 chr17 15696047 15696089 -73808464 + L2 LINE L2 2427 2468 -846 192 200 0 0 chr17 15696091 15696141 -73808412 + (TA)n Simple_repeat Simple_repeat 2 51 0 2125 118 0 13 chr17 15696204 15696508 -73808045 + AluSx SINE Alu 1 300 -12 1397 219 30 16 chr17 15696523 15696869 -73807684 - MER4D LTR ERV1 -41 862 392 1767 149 28 0 chr17 15696871 15697153 -73807400 - MER49 LTR ERV1 -632 291 2 792 321 65 6 chr17 15697159 15697585 -73806968 + L2 LINE L2 2535 3004 -309 3196 39 3 0 chr17 15697684 15698046 -73806507 - L1PA5 LINE L1 0 6154 5792 369 306 16 16 chr17 15698077 15698201 -73806352 - MIR3 SINE MIR -36 172 49 22 35 0 0 chr17 15698511 15698540 -73806013 + AT_rich Low_complexity Low_complexity 1 29 0 1367 174 0 0 chr17 15698757 15698970 -73805583 + AluJb SINE Alu 84 296 -16 1199 201 64 18 chr17 15699610 15699893 -73804660 - MER39 LTR ERV1 0 707 412 849 99 7 70 chr17 15699919 15700061 -73804492 - MER50 LTR ERV1 -65 669 537 2398 144 5 5 chr17 15700080 15700448 -73804105 - L1PB1 LINE L1 -8 6143 5776 297 66 55 44 chr17 15700448 15700539 -73804014 + (TA)n Simple_repeat Simple_repeat 2 93 0 10231 179 15 6 chr17 15700540 15701826 -73802727 - L1PB1 LINE L1 -360 5791 4518 2181 114 0 0 chr17 15701826 15702116 -73802437 - AluSg SINE Alu -16 294 5 10231 179 15 6 chr17 15702116 15703579 -73800974 - L1PB1 LINE L1 -1633 4518 3025 3183 172 3 5 chr17 15703577 15704159 -73800394 + L1M4 LINE L1 2453 3033 -3113 * 2988 164 27 36 chr17 15704164 15704719 -73799834 - MER50 LTR ERV1 -184 550 1 522 258 139 43 chr17 15704719 15704925 -73799628 - MER34 LTR ERV1 -316 226 1 257 306 14 0 chr17 15705797 15705869 -73798684 + MIR SINE MIR 188 260 -2 2056 112 3 11 chr17 15706196 15706512 -73798041 - AluSq SINE Alu 0 314 1 284 257 57 0 chr17 15708128 15708198 -73796355 - L2 LINE L2 -1 3312 3239 2674 210 24 15 chr17 15709765 15710350 -73794203 - L1MD3 LINE L1 -1 7994 7405 344 207 0 69 chr17 15710350 15710437 -73794116 - MLT1F1 LTR MaLR -442 125 45 4141 236 72 19 chr17 15710484 15711685 -73792868 - L1MC3 LINE L1 -974 6811 5548 390 139 14 14 chr17 15711680 15711752 -73792801 - L1MD3 LINE L1 -195 7800 7729 * 555 344 44 59 chr17 15712156 15712743 -73791810 + L1M4 LINE L1 3250 3825 -2321 1804 148 62 45 chr17 15712743 15713101 -73791452 + MLT1A1 LTR MaLR 1 364 -1 555 344 44 59 chr17 15713101 15713242 -73791311 + L1M4 LINE L1 3825 3967 -2179 23 33 0 0 chr17 15713370 15713400 -73791153 + AT_rich Low_complexity Low_complexity 1 30 0 292 340 32 27 chr17 15713663 15713848 -73790705 + L2 LINE L2 2996 3181 -132 491 335 42 0 chr17 15713913 15714158 -73790395 - L2 LINE L2 -310 3003 2751 2079 301 168 8 chr17 15714185 15715257 -73789296 - L2 LINE L2 -926 2388 1145 209 253 25 38 chr17 15715286 15715365 -73789188 - MIR SINE MIR -111 151 74 2191 62 0 122 chr17 15717225 15717561 -73786992 - AluY SINE Alu -6 295 1 789 87 0 56 chr17 15717776 15717902 -73786651 + Tigger2a DNA MER2_type 5 123 -311 1674 126 69 11 chr17 15718026 15718303 -73786250 + Tigger2a DNA MER2_type 152 444 0 2157 113 3 13 chr17 15718341 15718651 -73785902 + AluSx SINE Alu 1 307 -5 180 0 0 0 chr17 15718941 15718961 -73785592 + (A)n Simple_repeat Simple_repeat 1 20 0 471 78 0 0 chr17 15718990 15719054 -73785499 + (GAA)n Simple_repeat Simple_repeat 1 64 0 386 221 107 41 chr17 15719171 15719293 -73785260 - LTR16C LTR ERVL 0 491 362 757 222 108 0 chr17 15719709 15719894 -73784659 - L2 LINE L2 0 3313 3109 242 292 64 43 chr17 15721347 15721513 -73783040 - MIR SINE MIR -31 177 12 2383 38 41 7 chr17 15721546 15721837 -73782716 + AluY SINE Alu 1 301 -10 23 33 0 0 chr17 15721879 15721909 -73782644 + AT_rich Low_complexity Low_complexity 1 30 0 226 309 164 7 chr17 15722603 15722755 -73781798 - L2 LINE L2 -20 3293 3118 260 356 0 0 chr17 15722915 15723016 -73781537 + L2 LINE L2 1146 1246 -2068 875 300 114 24 chr17 15723092 15723555 -73780998 - LTR33 LTR ERVL -7 514 10 866 271 106 61 chr17 15723619 15724044 -73780509 + L1ME1 LINE L1 5551 5994 -172 327 244 144 25 chr17 15724148 15724251 -73780302 + L1ME1 LINE L1 5973 6103 -63 318 26 0 0 chr17 15724251 15724290 -73780263 + (TG)n Simple_repeat Simple_repeat 2 40 0 327 244 144 25 chr17 15724290 15724346 -73780207 + L1ME1 LINE L1 6103 6151 -15 263 317 10 29 chr17 15724371 15724475 -73780078 + L2 LINE L2 1351 1452 -1862 1018 213 121 114 chr17 15724603 15725048 -73779505 - MER39 LTR ERV1 -25 682 67 229 268 47 24 chr17 15725175 15725302 -73779251 + L2 LINE L2 1708 1837 -1477 242 175 0 0 chr17 15725373 15725413 -73779140 - L1MC4 LINE L1 -73 7969 7930 186 43 0 0 chr17 15725704 15725727 -73778826 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 236 300 73 84 chr17 15725727 15726394 -73778159 - HAL1 LINE L1 -791 1716 1057 2216 105 0 10 chr17 15727146 15727442 -73777111 + AluSc SINE Alu 1 293 -16 182 333 114 0 chr17 15727819 15727951 -73776602 - L2 LINE L2 -253 3019 2873 267 31 0 0 chr17 15727977 15728009 -73776544 + (TCC)n Simple_repeat Simple_repeat 2 33 0 2144 99 3 41 chr17 15728692 15729006 -73775547 - AluSg SINE Alu -8 302 1 304 173 0 0 chr17 15729556 15729608 -73774945 + L1MC4 LINE L1 6652 6703 -1339 261 0 0 0 chr17 15729833 15729862 -73774691 + (TAG)n Simple_repeat Simple_repeat 1 29 0 2419 80 7 0 chr17 15729862 15730161 -73774392 - AluY SINE Alu -10 301 1 704 259 150 74 chr17 15731117 15731604 -73772949 + MLT1H1 LTR MaLR 32 555 0 186 344 117 16 chr17 15731922 15732050 -73772503 - L2 LINE L2 -8 3305 3165 185 152 30 0 chr17 15732178 15732211 -73772342 + MIR SINE MIR 45 78 -130 186 71 0 0 chr17 15732289 15732317 -73772236 + (T)n Simple_repeat Simple_repeat 1 28 0 4167 200 35 17 chr17 15732511 15733695 -73770858 + L1MB8 LINE L1 4961 6155 -23 2333 170 36 0 chr17 15734424 15734835 -73769718 + MSTB1 LTR MaLR 1 426 -6 183 250 23 0 chr17 15735028 15735072 -73769481 + L2 LINE L2 3251 3295 -18 354 250 42 42 chr17 15736541 15736685 -73767868 - MER103 DNA DNA -13 153 10 375 286 36 77 chr17 15737254 15737410 -73767143 + MIR SINE MIR 9 157 -105 2390 95 0 0 chr17 15737410 15737715 -73766838 + AluSp SINE Alu 2 306 -7 375 286 36 77 chr17 15737715 15737754 -73766799 + MIR SINE MIR 157 196 -66 923 250 62 102 chr17 15738719 15739139 -73765414 - L2 LINE L2 0 3313 2911 206 311 16 0 chr17 15739678 15739739 -73764814 - MER5A DNA MER1_type -68 121 60 245 350 12 12 chr17 15740770 15740850 -73763703 + MLT1K LTR MaLR 80 159 -429 319 323 38 8 chr17 15740939 15741072 -73763481 + MLT1K LTR MaLR 338 474 -114 190 340 68 49 chr17 15741170 15741332 -73763221 + MIR3 SINE MIR 42 206 -2 300 266 236 15 chr17 15742463 15742662 -73761891 + LTR33 LTR ERVL 180 422 -99 1886 223 135 24 chr17 15743103 15743569 -73760984 + MLT2B1 LTR ERVL 3 520 0 2052 135 7 7 chr17 15743834 15744137 -73760416 + AluSx SINE Alu 1 303 -9 32 0 0 0 chr17 15744137 15744169 -73760384 + AT_rich Low_complexity Low_complexity 1 32 0 597 261 6 51 chr17 15744431 15744607 -73759946 - MER5B DNA MER1_type -10 168 1 2170 114 0 0 chr17 15744706 15744995 -73759558 + AluY SINE Alu 9 297 -14 950 189 21 31 chr17 15745140 15745331 -73759222 - MER5A DNA MER1_type 0 189 1 2093 161 45 34 chr17 15746149 15746691 -73757862 + MLT2A2 LTR ERVL 1 554 0 560 186 0 62 chr17 15746971 15747100 -73757453 + MER103 DNA DNA 2 122 -44 2294 95 7 0 chr17 15747214 15747509 -73757044 + AluSx SINE Alu 1 297 -15 487 308 11 39 chr17 15748182 15748364 -73756189 - MIR SINE MIR -71 191 15 2402 87 0 0 chr17 15748656 15748967 -73755586 - AluY SINE Alu 0 311 1 207 88 0 0 chr17 15749020 15749054 -73755499 + (A)n Simple_repeat Simple_repeat 1 34 0 2537 68 0 0 chr17 15749613 15749921 -73754632 - AluY SINE Alu -3 308 1 306 148 0 0 chr17 15749937 15749991 -73754562 + (TC)n Simple_repeat Simple_repeat 1 54 0 599 280 136 18 chr17 15750559 15750924 -73753629 + LTR16C LTR ERVL 9 454 -37 644 336 42 8 chr17 15751743 15751981 -73752572 - L2 LINE L2 -387 2927 2682 347 344 169 11 chr17 15752023 15752212 -73752341 - MIR SINE MIR -22 240 22 3834 162 20 61 chr17 15752447 15752616 -73751937 - LTR39 LTR ERV1 0 783 609 2169 93 0 7 chr17 15752616 15752905 -73751648 - AluY SINE Alu -24 287 1 3834 162 20 61 chr17 15752905 15753300 -73751253 - LTR39 LTR ERV1 -174 609 199 1929 142 0 27 chr17 15753300 15753596 -73750957 + AluSx SINE Alu 1 288 -24 198 0 0 0 chr17 15753606 15753628 -73750925 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 3834 162 20 61 chr17 15753628 15753646 -73750907 - LTR39 LTR ERV1 -593 190 173 2370 129 56 8 chr17 15753646 15754042 -73750511 + L1PA15 LINE L1 5745 6159 -6 3834 162 20 61 chr17 15754042 15754263 -73750290 - LTR39 LTR ERV1 -610 173 1 2423 70 7 0 chr17 15754928 15755228 -73749325 + AluY SINE Alu 1 302 -9 234 291 0 0 chr17 15755301 15755356 -73749197 + MLT1K LTR MaLR 126 180 -408 744 187 8 0 chr17 15755397 15755520 -73749033 + FLAM_A SINE Alu 2 125 -8 233 131 0 60 chr17 15756375 15756459 -73748094 + (TTTTTG)n Simple_repeat Simple_repeat 2 80 0 1675 182 94 52 chr17 15756798 15757255 -73747298 - MER66B LTR ERV1 -10 476 1 2294 79 6 38 chr17 15757700 15758016 -73746537 - AluY SINE Alu -5 306 1 24 53 0 0 chr17 15758251 15758289 -73746264 + AT_rich Low_complexity Low_complexity 1 38 0 382 254 103 48 chr17 15758884 15759392 -73745161 + L1ME LINE L1 5294 5822 -299 21 0 0 0 chr17 15759478 15759499 -73745054 + AT_rich Low_complexity Low_complexity 1 21 0 655 266 38 76 chr17 15759916 15760179 -73744374 - MIR SINE MIR 0 262 10 822 223 16 21 chr17 15761834 15762076 -73742477 + MER33 DNA MER1_type 1 241 -83 590 295 79 27 chr17 15762069 15762476 -73742077 + LTR33 LTR ERVL 32 459 -62 * 805 222 0 0 chr17 15762986 15763139 -73741414 + FRAM SINE Alu 10 162 -14 25 0 0 0 chr17 15763461 15763486 -73741067 + AT_rich Low_complexity Low_complexity 1 25 0 670 309 21 0 chr17 15763510 15763698 -73740855 - MIR SINE MIR -67 195 4 543 276 19 0 chr17 15764258 15764414 -73740139 - MER63A DNA MER1_type -8 202 44 321 223 75 11 chr17 15764747 15764841 -73739712 + MLT1K LTR MaLR 455 554 -34 209 492 0 0 chr17 15765327 15765449 -73739104 + L2 LINE L2 2844 2965 -349 1230 248 46 39 chr17 15766230 15766662 -73737891 - LTR16A LTR ERVL 0 450 16 243 211 18 35 chr17 15766938 15766995 -73737558 - MER115 DNA AcHobo 0 693 638 396 301 37 0 chr17 15767096 15767232 -73737321 - MER115 DNA AcHobo -437 256 116 2096 98 41 0 chr17 15767289 15767584 -73736969 + AluSx SINE Alu 1 307 -5 1998 121 10 17 chr17 15767624 15767921 -73736632 + AluSg SINE Alu 1 295 -15 2483 259 77 44 chr17 15767977 15768064 -73736489 - L1ME LINE L1 -4880 1200 1117 2399 74 7 3 chr17 15768064 15768374 -73736179 - AluY SINE Alu 0 311 1 2483 259 77 44 chr17 15768374 15769462 -73735091 - L1ME LINE L1 -4963 1117 8 266 240 325 5 chr17 15770286 15770486 -73734067 - LTR33A LTR ERVL -136 387 124 720 226 0 0 chr17 15770659 15770792 -73733761 + FLAM_C SINE Alu 1 133 0 292 216 20 10 chr17 15772044 15772146 -73732407 + GA-rich Low_complexity Low_complexity 2 104 0 2414 76 0 13 chr17 15774009 15774312 -73730241 - AluY SINE Alu -11 300 2 772 308 9 0 chr17 15774524 15774738 -73729815 + MIR SINE MIR 46 261 -1 203 279 59 0 chr17 15774827 15774895 -73729658 + MIR SINE MIR 118 189 -73 2492 65 0 0 chr17 15776421 15776728 -73727825 + AluY SINE Alu 1 307 -4 2215 88 3 3 chr17 15776738 15777044 -73727509 + AluSx SINE Alu 1 306 0 440 314 71 53 chr17 15777048 15777554 -73726999 + L2 LINE L2 2292 2806 -508 2184 115 3 3 chr17 15777599 15777903 -73726650 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr17 15778060 15778081 -73726472 + AT_rich Low_complexity Low_complexity 1 21 0 251 286 102 62 chr17 15778617 15778705 -73725848 - L1MEd LINE L1 -2965 3164 3081 1549 134 85 19 chr17 15778705 15779012 -73725541 - L1MA4 LINE L1 -6 6294 5968 251 286 102 62 chr17 15779012 15779060 -73725493 - L1MEd LINE L1 -3048 3081 3036 2546 72 0 0 chr17 15779060 15779366 -73725187 - AluY SINE Alu -5 306 1 251 286 102 62 chr17 15779366 15780223 -73724330 - L1MEd LINE L1 -3093 3036 2130 300 345 76 48 chr17 15780519 15781017 -73723536 - L1MEd LINE L1 -5340 779 268 583 336 42 29 chr17 15783550 15783862 -73720691 - MER115 DNA AcHobo -376 317 2 182 357 0 0 chr17 15783896 15783966 -73720587 - L2 LINE L2 0 3313 3244 237 203 0 54 chr17 15783969 15784043 -73720510 - MARNA DNA Mariner -14 572 503 233 254 18 0 chr17 15784126 15784181 -73720372 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 222 310 60 40 chr17 15784185 15784285 -73720268 - MIR3 SINE MIR -39 169 68 2552 33 0 3 chr17 15785313 15785615 -73718938 + L1PA5 LINE L1 5845 6145 -9 220 122 61 0 chr17 15785630 15785679 -73718874 + A-rich Low_complexity Low_complexity 2 53 0 300 325 64 32 chr17 15785955 15786143 -73718410 + L1ME LINE L1 1053 1246 -4959 181 364 0 0 chr17 15786357 15786412 -73718141 - L2 LINE L2 -18 3254 3200 1508 186 0 24 chr17 15786573 15786825 -73717728 + AluJo SINE Alu 28 273 -39 337 256 54 50 chr17 15787206 15787307 -73717246 - MER97c DNA MER1_type? -2 1088 989 2214 122 0 3 chr17 15787307 15787610 -73716943 + AluSx SINE Alu 1 302 -10 337 256 54 50 chr17 15787610 15787766 -73716787 - MER97c DNA MER1_type? -101 989 830 6267 173 36 28 chr17 15787787 15788910 -73715643 + L1MC3 LINE L1 6380 7519 -266 2255 80 3 14 chr17 15788910 15789229 -73715324 - AluSp SINE Alu 0 316 1 6267 173 36 28 chr17 15789229 15789484 -73715069 + L1MC3 LINE L1 7519 7770 -15 583 263 63 5 chr17 15789553 15789743 -73714810 - MER97c DNA MER1_type? -518 572 372 1426 169 27 4 chr17 15789770 15790031 -73714522 - Tigger3(Golem) DNA MER2_type 0 3029 2763 3582 82 8 34 chr17 15790036 15790229 -73714324 + L1PA8 LINE L1 5644 5841 -331 2295 63 3 3 chr17 15790229 15790536 -73714017 - AluY SINE Alu 0 307 1 3582 82 8 34 chr17 15790536 15790876 -73713677 + L1PA8 LINE L1 5841 6164 -8 344 269 156 19 chr17 15790896 15791056 -73713497 + L1ME LINE L1 1823 2004 -4392 281 178 178 44 chr17 15791414 15791594 -73712959 + L1ME LINE L1 2026 2229 -4167 3568 267 33 28 chr17 15791985 15792510 -73712043 + L1ME LINE L1 2387 2908 -3307 2826 16 0 0 chr17 15792510 15792823 -73711730 + AluYb8 SINE Alu 1 313 -5 3568 267 33 28 chr17 15792823 15793648 -73710905 + L1ME LINE L1 2908 3747 -2468 1734 166 0 46 chr17 15793648 15793793 -73710760 + AluJb SINE Alu 1 126 -186 2357 67 0 3 chr17 15793793 15794092 -73710461 + AluY SINE Alu 2 299 -12 1734 166 0 46 chr17 15794092 15794253 -73710300 + AluJb SINE Alu 126 293 -19 3568 267 33 28 chr17 15794253 15794427 -73710126 + L1ME LINE L1 3747 3919 -2296 1622 246 98 12 chr17 15794432 15794810 -73709743 + L1MD2 LINE L1 5733 6176 -183 318 26 0 0 chr17 15794810 15794849 -73709704 + (CA)n Simple_repeat Simple_repeat 2 40 0 1622 246 98 12 chr17 15794849 15795034 -73709519 + L1MD2 LINE L1 6176 6344 -15 370 114 14 0 chr17 15795072 15795142 -73709411 - Charlie4 DNA MER1_type -110 1851 1781 1955 237 60 47 chr17 15795151 15796008 -73708545 + L1ME LINE L1 3916 4783 -1432 1061 254 20 0 chr17 15796009 15796355 -73708198 + L1M4 LINE L1 2583 2935 -3211 380 306 33 25 chr17 15796375 15796496 -73708057 - MIR SINE MIR -113 149 28 934 251 35 0 chr17 15796642 15796845 -73707708 - MIR SINE MIR -51 211 2 23 86 0 0 chr17 15796935 15796993 -73707560 + AT_rich Low_complexity Low_complexity 1 58 0 1661 194 6 20 chr17 15797095 15797440 -73707113 + MER2 DNA MER2_type 6 345 0 2172 112 0 3 chr17 15797895 15798190 -73706363 + AluSc SINE Alu 1 294 -15 226 273 70 0 chr17 15798224 15798352 -73706201 + L1ME LINE L1 5703 5839 -351 1027 157 27 196 chr17 15800849 15801190 -73703363 - MLT1A1 LTR MaLR 0 365 113 2096 88 0 0 chr17 15801190 15801453 -73703100 - AluSc SINE Alu -33 276 14 1027 157 27 196 chr17 15801453 15801550 -73703003 - MLT1A1 LTR MaLR -252 113 1 325 319 149 37 chr17 15801663 15802165 -73702388 - L2 LINE L2 0 3313 2764 2341 113 0 0 chr17 15804442 15804753 -73699800 - AluSx SINE Alu -1 311 1 285 257 79 10 chr17 15804899 15805000 -73699553 + L2 LINE L2 3186 3293 -20 1386 170 166 106 chr17 15805120 15805570 -73698983 + MER39 LTR ERV1 4 561 -146 1011 202 18 9 chr17 15805570 15805788 -73698765 - L1PA16 LINE L1 0 6166 5947 1386 170 166 106 chr17 15805788 15805945 -73698608 + MER39 LTR ERV1 561 707 0 1527 210 0 31 chr17 15807491 15807810 -73696743 + AluJb SINE Alu 1 309 -3 2528 78 0 0 chr17 15807815 15808124 -73696429 + AluY SINE Alu 1 309 -2 2033 129 0 14 chr17 15808133 15808459 -73696094 + AluSq SINE Alu 3 324 0 1336 155 12 85 chr17 15809040 15809234 -73695319 - MER33 DNA MER1_type -2261 324 164 2082 134 0 10 chr17 15809234 15809526 -73695027 + AluSx SINE Alu 1 289 -23 1336 155 12 85 chr17 15809526 15809672 -73694881 - MER33 DNA MER1_type -2421 164 9 628 207 0 57 chr17 15811320 15811460 -73693093 + FLAM_A SINE Alu 2 133 0 23 0 0 0 chr17 15811929 15811952 -73692601 + AT_rich Low_complexity Low_complexity 1 23 0 244 360 43 19 chr17 15811995 15812156 -73692397 - L2 LINE L2 -181 3091 2927 1764 181 55 5 chr17 15812342 15812786 -73691767 - MLT2B1 LTR ERVL 0 515 1 634 323 65 34 chr17 15812925 15813429 -73691124 - L2 LINE L2 -923 2391 1872 1144 103 0 36 chr17 15813478 15813665 -73690888 + AluSg/x SINE Alu 140 312 0 877 224 44 19 chr17 15813809 15814014 -73690539 + MER63A DNA MER1_type 1 210 0 196 306 45 27 chr17 15814368 15814479 -73690074 + L2 LINE L2 3199 3311 -2 2510 67 0 3 chr17 15814617 15814917 -73689636 + AluY SINE Alu 1 299 -12 314 262 131 91 chr17 15815914 15816311 -73688242 - MLT1K LTR MaLR -1 587 175 282 329 21 0 chr17 15816406 15816546 -73688007 - MIR SINE MIR -33 229 87 1987 226 110 17 chr17 15816568 15816992 -73687561 + LTR48B LTR ERV1 1 497 -147 4190 108 8 26 chr17 15816992 15817260 -73687293 - MER4A LTR ERV1 0 600 329 2136 101 3 58 chr17 15817260 15817587 -73686966 - AluSc SINE Alu 0 309 1 4190 108 8 26 chr17 15817587 15817929 -73686624 - MER4A LTR ERV1 -271 329 1 1987 226 110 17 chr17 15817929 15818093 -73686460 + LTR48B LTR ERV1 497 644 0 25 51 0 0 chr17 15818627 15818666 -73685887 + AT_rich Low_complexity Low_complexity 1 39 0 670 208 29 20 chr17 15820641 15820827 -73683726 - MER5A DNA MER1_type -1 177 1 300 250 52 52 chr17 15820831 15820947 -73683606 + MER5B DNA MER1_type 2 117 -61 2212 108 14 7 chr17 15821455 15821752 -73682801 - AluSx SINE Alu -13 299 1 509 286 105 64 chr17 15822063 15823534 -73681019 + L1P5 LINE L1 3913 5456 -700 249 139 0 0 chr17 15823570 15823613 -73680940 + (ATG)n Simple_repeat Simple_repeat 3 45 0 410 234 11 0 chr17 15823659 15823753 -73680800 - MIR SINE MIR -46 216 122 619 224 92 6 chr17 15823754 15823928 -73680625 + MER112 DNA MER1_type 71 259 -1 533 236 242 53 chr17 15824845 15825184 -73679369 + MLT1I LTR MaLR 5 407 -2 740 202 31 103 chr17 15825769 15825873 -73678680 - MER63A DNA MER1_type -1481 207 126 1559 194 27 3 chr17 15825873 15826166 -73678387 - AluJo SINE Alu -12 300 1 740 202 31 103 chr17 15826166 15826284 -73678269 - MER63A DNA MER1_type -1562 126 1 203 292 22 56 chr17 15826492 15826581 -73677972 - L2 LINE L2 -50 3263 3178 696 280 95 85 chr17 15826732 15827194 -73677359 + MLT1K LTR MaLR 66 535 -53 1331 99 103 24 chr17 15827194 15827315 -73677238 + MER30 DNA MER1_type 1 111 -119 234 0 0 0 chr17 15827315 15827341 -73677212 + (TA)n Simple_repeat Simple_repeat 2 27 0 1331 99 103 24 chr17 15827341 15827432 -73677121 + MER30 DNA MER1_type 111 230 0 696 280 95 85 chr17 15827432 15827487 -73677066 + MLT1K LTR MaLR 535 588 0 226 302 42 10 chr17 15828952 15829048 -73675505 - L1MC4 LINE L1 -1327 6715 6617 195 42 0 0 chr17 15829048 15829072 -73675481 + (TG)n Simple_repeat Simple_repeat 2 25 0 231 219 164 52 chr17 15829292 15829410 -73675143 + MIR SINE MIR 22 146 -62 281 270 126 6 chr17 15830203 15830362 -73674191 - MIR SINE MIR -24 238 61 198 307 164 0 chr17 15830511 15830651 -73673902 - MIR SINE MIR -21 241 79 2407 90 0 10 chr17 15830862 15831174 -73673379 + AluSg SINE Alu 1 309 -1 377 167 26 0 chr17 15832071 15832149 -73672404 - MER116 DNA Mariner 0 80 1 349 270 36 105 chr17 15832510 15832758 -73671795 + L2 LINE L2 2233 2463 -851 327 145 66 13 chr17 15834602 15834678 -73669875 - MER116 DNA Mariner 0 80 1 350 54 36 0 chr17 15835841 15835897 -73668656 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 2214 120 0 10 chr17 15836073 15836381 -73668172 + AluSx SINE Alu 1 305 -7 2049 141 3 7 chr17 15836899 15837205 -73667348 - AluSx SINE Alu -7 305 1 736 277 96 38 chr17 15837270 15837717 -73666836 + LTR16C LTR ERVL 19 491 0 376 226 60 0 chr17 15838401 15838534 -73666019 + L1ME4a LINE L1 5965 6105 -16 334 305 52 46 chr17 15838609 15838783 -73665770 - L2 LINE L2 -36 3277 3103 1592 183 16 65 chr17 15838825 15839197 -73665356 - MLT1A1 LTR MaLR -8 357 4 2298 109 6 3 chr17 15840544 15840856 -73663697 + AluSq SINE Alu 1 313 0 2553 48 13 10 chr17 15841003 15841188 -73663365 - AluY SINE Alu 0 311 123 315 0 0 0 chr17 15841188 15841223 -73663330 + (TG)n Simple_repeat Simple_repeat 2 36 0 2553 48 13 10 chr17 15841223 15841347 -73663206 - AluY SINE Alu -188 123 1 544 241 56 12 chr17 15841535 15841697 -73662856 + L1ME1 LINE L1 5994 6162 -4 370 241 0 68 chr17 15842600 15842791 -73661762 + C-rich Low_complexity Low_complexity 2 179 0 740 287 75 47 chr17 15842927 15843091 -73661462 - LTR33 LTR ERVL -2 519 361 997 156 21 11 chr17 15843091 15843277 -73661276 + MER53 DNA DNA 1 188 -1 740 287 75 47 chr17 15843277 15843603 -73660950 - LTR33 LTR ERVL -160 361 15 2416 67 0 3 chr17 15844042 15844339 -73660214 + AluY SINE Alu 3 298 -13 200 95 0 71 chr17 15844595 15844637 -73659916 + (TTTTTG)n Simple_repeat Simple_repeat 6 44 0 2453 82 0 0 chr17 15845047 15845351 -73659202 + AluSg SINE Alu 1 304 -6 1552 189 102 23 chr17 15847563 15847917 -73656636 + MLT1B LTR MaLR 1 382 -8 1544 211 50 21 chr17 15847972 15848309 -73656244 - MLT1C LTR MaLR -9 458 112 298 164 33 0 chr17 15848313 15848374 -73656179 - L1MA9 LINE L1 -10 6302 6240 2081 124 7 0 chr17 15848383 15848703 -73655850 - AluSp SINE Alu 0 322 1 414 163 35 12 chr17 15848747 15848828 -73655725 - MLT1C LTR MaLR -343 124 42 2259 177 71 8 chr17 15848828 15849303 -73655250 + LTR27 LTR ERV1 3 574 -149 227 299 0 15 chr17 15849368 15849435 -73655118 + LTR28 LTR ERV1 954 1019 -1 279 0 0 0 chr17 15850577 15850608 -73653945 + (TG)n Simple_repeat Simple_repeat 1 31 0 213 94 0 0 chr17 15851544 15851576 -73652977 + (CAT)n Simple_repeat Simple_repeat 2 33 0 286 265 62 62 chr17 15851761 15851972 -73652581 + L1MC4a LINE L1 5719 5929 -1879 813 158 8 0 chr17 15852435 15852562 -73651991 + FLAM_A SINE Alu 1 128 -5 540 231 20 27 chr17 15853344 15853491 -73651062 + MER103 DNA DNA 1 146 -20 464 194 29 0 chr17 15853778 15853881 -73650672 + MER5A DNA MER1_type 7 112 -77 478 206 219 19 chr17 15857629 15857784 -73646769 + MER5A DNA MER1_type 4 189 0 3716 204 95 51 chr17 15857945 15858310 -73646243 + L1MD2 LINE L1 5079 5426 -933 2509 38 0 0 chr17 15858310 15858600 -73645953 + AluY SINE Alu 1 290 -21 3716 204 95 51 chr17 15858600 15858613 -73645940 + L1MD2 LINE L1 5426 5437 -922 2116 165 94 13 chr17 15858613 15859007 -73645546 + MSTB LTR MaLR 1 426 0 3716 204 95 51 chr17 15859007 15859848 -73644705 + L1MD2 LINE L1 5437 6346 -13 467 241 28 88 chr17 15859905 15860121 -73644432 + MER63A DNA MER1_type 8 210 0 209 271 47 156 chr17 15860139 15860197 -73644356 + MER5A DNA MER1_type 18 81 -108 2499 60 0 0 chr17 15860197 15860498 -73644055 + AluSc SINE Alu 1 301 -8 209 271 47 156 chr17 15860498 15860509 -73644044 + MER5A DNA MER1_type 81 92 -97 2109 88 70 0 chr17 15860509 15860793 -73643760 + AluSg SINE Alu 1 304 -6 209 271 47 156 chr17 15860793 15860914 -73643639 + MER5A DNA MER1_type 92 188 -1 865 200 28 39 chr17 15861300 15861480 -73643073 - MER5B DNA MER1_type 0 178 1 207 250 36 0 chr17 15861772 15861856 -73642697 + (TA)n Simple_repeat Simple_repeat 1 87 0 192 274 20 0 chr17 15863813 15863864 -73640689 - MIR3 SINE MIR -52 156 105 303 28 0 0 chr17 15864265 15864301 -73640252 + (A)n Simple_repeat Simple_repeat 1 36 0 183 295 90 57 chr17 15864356 15864478 -73640075 + MIR3 SINE MIR 67 192 -16 782 226 62 35 chr17 15864653 15864879 -73639674 - MER41E LTR ERV1 0 512 281 1320 172 85 108 chr17 15864900 15865403 -73639150 + MER66A LTR ERV1 99 478 0 861 270 0 14 chr17 15865403 15865593 -73638960 - MER41E LTR ERV1 -231 281 95 2115 123 47 37 chr17 15865913 15866466 -73638087 - MER51A LTR ERV1 -2 632 1 221 271 0 0 chr17 15866511 15866581 -73637972 + C-rich Low_complexity Low_complexity 1 70 0 1213 173 126 73 chr17 15866696 15867077 -73637476 + MER57A LTR ERV1 3 403 0 27 49 0 0 chr17 15867615 15867656 -73636897 + AT_rich Low_complexity Low_complexity 1 41 0 258 116 0 0 chr17 15868029 15868072 -73636481 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 389 255 18 44 chr17 15869606 15869743 -73634810 + MIR3 SINE MIR 56 193 -15 253 273 0 0 chr17 15870359 15870414 -73634139 + (TG)n Simple_repeat Simple_repeat 2 56 0 308 259 25 25 chr17 15871880 15871961 -73632592 + LTR67 LTR ERVL 92 172 -385 * 674 240 53 104 chr17 15871904 15872348 -73632205 + MLT1L LTR MaLR 110 614 -1 258 291 150 0 chr17 15872558 15872685 -73631868 + MIR SINE MIR 117 262 0 339 319 63 42 chr17 15873030 15873315 -73631238 - HAL1b LINE L1 -532 816 526 1616 248 116 60 chr17 15873335 15873851 -73630702 - L2 LINE L2 -443 2871 2310 493 175 0 0 chr17 15873851 15873931 -73630622 + MADE1 DNA Mariner 1 80 0 1616 248 116 60 chr17 15873931 15874060 -73630493 - L2 LINE L2 -1004 2310 2190 2623 42 0 10 chr17 15875581 15875892 -73628661 + AluY SINE Alu 1 308 -3 2267 112 0 0 chr17 15876885 15877189 -73627364 - AluY SINE Alu -7 304 1 1109 122 59 115 chr17 15877461 15877616 -73626937 + L1MA9 LINE L1 5958 6091 -221 2575 55 3 0 chr17 15877616 15877924 -73626629 + AluY SINE Alu 1 309 -2 1109 122 59 115 chr17 15877924 15878054 -73626499 + L1MA9 LINE L1 6091 6227 -85 2478 154 31 3 chr17 15878055 15878445 -73626108 + MER57A LTR ERV1 3 403 0 5284 138 10 9 chr17 15878460 15879250 -73625303 + MER57A-int LTR ERV1 16 806 -6731 2015 110 4 0 chr17 15879243 15879507 -73625046 + MER57A-int LTR ERV1 361 625 -5321 * 5121 138 42 10 chr17 15879496 15880329 -73624224 + MER57A-int LTR ERV1 1081 1940 -4006 * 20606 79 11 5 chr17 15880322 15883013 -73621540 + MER57A-int LTR ERV1 4411 7118 -419 660 142 50 8 chr17 15883025 15883145 -73621408 + LTR54B LTR ERV1 5 129 -369 1816 97 4 37 chr17 15883147 15883416 -73621137 + MER57A-int LTR ERV1 7278 7537 0 2491 162 18 0 chr17 15883416 15883812 -73620741 + MER57A LTR ERV1 1 403 0 1970 252 69 28 chr17 15884849 15885353 -73619200 + MER21B LTR ERV1 2 526 -337 1031 318 87 20 chr17 15885508 15886141 -73618412 + L2 LINE L2 1686 2360 -954 356 252 15 59 chr17 15886146 15886281 -73618272 - LTR33 LTR ERVL 0 521 393 * 635 264 121 0 chr17 15886278 15886460 -73618093 - LTR33 LTR ERVL -315 206 3 2467 145 35 40 chr17 15886467 15886895 -73617658 - MSTB LTR MaLR 0 426 1 367 328 16 16 chr17 15887175 15887297 -73617256 + L2 LINE L2 3139 3260 -12 368 309 39 55 chr17 15888239 15888420 -73616133 - MIR SINE MIR -64 198 21 395 19 19 0 chr17 15888931 15888983 -73615570 + (CA)n Simple_repeat Simple_repeat 2 54 0 21 0 0 0 chr17 15889254 15889275 -73615278 + AT_rich Low_complexity Low_complexity 1 21 0 270 274 48 12 chr17 15889301 15889385 -73615168 - MIR SINE MIR -117 145 59 409 284 28 0 chr17 15889689 15889798 -73614755 - L2 LINE L2 -8 3305 3194 1660 232 213 89 chr17 15889806 15890388 -73614165 - MLT1E2 LTR MaLR 0 626 1 610 350 150 20 chr17 15890467 15890752 -73613801 - L2 LINE L2 -296 3017 2771 2133 125 0 0 chr17 15890752 15891041 -73613512 - AluSg1 SINE Alu -20 289 1 610 350 150 20 chr17 15891041 15891241 -73613312 - L2 LINE L2 -542 2771 2496 411 327 60 44 chr17 15892068 15892683 -73611870 - L1M4 LINE L1 -2598 3548 2914 2611 26 3 13 chr17 15892683 15892987 -73611566 + AluY SINE Alu 1 301 -10 411 327 60 44 chr17 15892987 15893220 -73611333 - L1M4 LINE L1 -3232 2914 2686 310 269 50 28 chr17 15893541 15893682 -73610871 + L1MC/D LINE L1 4903 5046 -1100 3368 134 81 10 chr17 15893997 15894489 -73610064 - MER1A DNA MER1_type 0 527 1 796 319 57 24 chr17 15895137 15895677 -73608876 + L1MC/D LINE L1 5272 5829 -302 6074 115 13 9 chr17 15895763 15896704 -73607849 + L1PA14 LINE L1 5209 6161 0 2359 98 0 0 chr17 15897204 15897499 -73607054 + AluSx SINE Alu 1 295 -17 309 318 184 21 chr17 15897999 15898110 -73606443 + L1ME LINE L1 5391 5483 -638 703 160 38 46 chr17 15898110 15898241 -73606312 + FLAM_A SINE Alu 4 133 0 309 318 184 21 chr17 15898241 15898362 -73606191 + L1ME LINE L1 5483 5661 -460 21 0 0 0 chr17 15898420 15898441 -73606112 + AT_rich Low_complexity Low_complexity 1 21 0 1783 55 0 18 chr17 15898591 15898966 -73605587 + AluY SINE Alu 70 440 0 23 0 0 0 chr17 15899383 15899406 -73605147 + AT_rich Low_complexity Low_complexity 1 23 0 323 290 143 36 chr17 15899498 15899750 -73604803 - L1M4 LINE L1 -1550 4596 4318 198 0 0 0 chr17 15899856 15899878 -73604675 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 1904 97 3 80 chr17 15899878 15900178 -73604375 - AluSc SINE Alu -32 277 1 374 345 31 63 chr17 15900294 15900613 -73603940 - L1M4 LINE L1 -2244 3902 3594 403 297 36 0 chr17 15900869 15901007 -73603546 + L1ME4a LINE L1 5974 6116 -5 202 225 0 0 chr17 15902086 15902126 -73602427 + CT-rich Low_complexity Low_complexity 1 40 0 381 252 26 73 chr17 15902411 15902562 -73601991 - MIR SINE MIR -55 207 64 229 342 26 9 chr17 15902573 15902687 -73601866 + L2 LINE L2 3148 3263 -9 180 281 101 73 chr17 15902831 15902991 -73601562 + L2 LINE L2 3130 3297 -16 2186 93 0 7 chr17 15902991 15903281 -73601272 + AluSq SINE Alu 1 288 -25 180 281 101 73 chr17 15903281 15903298 -73601255 + L2 LINE L2 3297 3312 -1 2349 64 3 10 chr17 15903404 15903701 -73600852 + AluSg SINE Alu 1 295 -15 251 266 133 58 chr17 15904065 15904253 -73600300 - MIR3 SINE MIR -4 204 3 482 273 84 26 chr17 15905326 15905480 -73599073 - MLT1L LTR MaLR -43 572 410 417 223 36 18 chr17 15905517 15905629 -73598924 - MLT1L LTR MaLR -298 317 204 274 191 48 16 chr17 15905602 15905665 -73598888 - MLT1J LTR MaLR -344 167 103 * 189 171 0 0 chr17 15905900 15905935 -73598618 + (CA)n Simple_repeat Simple_repeat 2 36 0 241 133 0 0 chr17 15905939 15905984 -73598569 - L1MC4 LINE L1 -1339 6703 6659 564 174 11 49 chr17 15906012 15906196 -73598357 + (CATATA)n Simple_repeat Simple_repeat 1 177 0 406 344 31 0 chr17 15906207 15906335 -73598218 - L2 LINE L2 0 3313 3182 211 233 0 0 chr17 15907589 15907632 -73596921 + MIR SINE MIR 88 130 -132 2434 59 0 23 chr17 15907632 15907998 -73596555 - AluY SINE Alu 0 359 1 204 293 61 30 chr17 15908749 15908848 -73595705 + L2 LINE L2 3150 3251 -62 215 169 0 68 chr17 15909110 15909169 -73595384 + A-rich Low_complexity Low_complexity 3 57 0 527 281 106 21 chr17 15909199 15909626 -73594927 + L1MC/D LINE L1 5265 5723 -689 1821 125 0 55 chr17 15909786 15910075 -73594478 + AluSx SINE Alu 39 311 -1 721 232 0 30 chr17 15910663 15910827 -73593726 + MER63A DNA MER1_type 24 182 -28 914 252 72 65 chr17 15910982 15911522 -73593031 + MER39 LTR ERV1 6 707 0 1859 174 0 7 chr17 15911683 15911988 -73592565 + AluJb SINE Alu 1 303 -9 189 0 0 0 chr17 15912808 15912829 -73591724 + (A)n Simple_repeat Simple_repeat 1 21 0 202 330 9 28 chr17 15913450 15913559 -73590994 + MIR SINE MIR 33 139 -123 2424 53 9 40 chr17 15913623 15913944 -73590609 - AluY SINE Alu 0 311 1 2729 140 37 18 chr17 15914543 15915000 -73589553 + LTR39 LTR ERV1 3 468 -315 446 169 0 36 chr17 15915002 15915085 -73589468 + LTR39 LTR ERV1 704 783 0 192 40 0 0 chr17 15915104 15915129 -73589424 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 1056 197 106 8 chr17 15915352 15915489 -73589064 - L1MA9 LINE L1 -3 6309 6187 339 78 0 0 chr17 15915489 15915540 -73589013 + (TG)n Simple_repeat Simple_repeat 2 52 0 1056 197 106 8 chr17 15915540 15915666 -73588887 - L1MA9 LINE L1 -125 6187 6020 2906 145 18 35 chr17 15915973 15916260 -73588293 + MER31A LTR ERV1 1 278 -207 2340 58 41 3 chr17 15916260 15916552 -73588001 - AluY SINE Alu -8 303 1 2906 145 18 35 chr17 15916552 15916753 -73587800 + MER31A LTR ERV1 278 481 -4 1664 183 31 9 chr17 15917194 15917511 -73587042 + L1MA3 LINE L1 5978 6301 -4 21 0 0 0 chr17 15917575 15917596 -73586957 + AT_rich Low_complexity Low_complexity 1 21 0 262 211 0 0 chr17 15918027 15918079 -73586474 + MER72 LTR ERV1 410 461 -261 542 192 103 51 chr17 15918121 15918335 -73586218 + LTR45B LTR ERV1 264 488 -1 622 267 41 23 chr17 15918344 15918516 -73586037 + LTR33 LTR ERVL 101 275 -246 268 208 0 0 chr17 15918622 15918675 -73585878 + LTR33 LTR ERVL 469 521 0 844 336 59 29 chr17 15919122 15919569 -73584984 + LTR67 LTR ERVL 9 476 -81 2010 191 18 25 chr17 15919569 15919962 -73584591 + MLT1B LTR MaLR 1 390 0 844 336 59 29 chr17 15919962 15920041 -73584512 + LTR67 LTR ERVL 476 551 -6 2488 253 48 59 chr17 15920069 15920453 -73584100 + L1ME LINE L1 6 393 -5677 2418 81 0 7 chr17 15920453 15920763 -73583790 + AluY SINE Alu 1 308 -3 2488 253 48 59 chr17 15920763 15921274 -73583279 + L1ME LINE L1 393 891 -5179 2418 87 3 3 chr17 15921395 15921704 -73582849 + AluSg1 SINE Alu 1 309 0 932 118 0 37 chr17 15923841 15923924 -73580629 - FLAM_C SINE Alu -181 131 53 4845 138 35 17 chr17 15923924 15924695 -73579858 - LTR1 LTR ERV1 0 785 1 932 118 0 37 chr17 15924695 15924747 -73579806 - FLAM_C SINE Alu -259 53 1 611 262 89 76 chr17 15924938 15925400 -73579153 + MLT1K LTR MaLR 5 472 -4 310 283 11 11 chr17 15925592 15925684 -73578869 - MIR SINE MIR -6 256 165 219 211 88 0 chr17 15925687 15925744 -73578809 - MIR SINE MIR -75 187 126 189 225 0 0 chr17 15926835 15926875 -73577678 + L2 LINE L2 3274 3313 0 210 71 0 0 chr17 15926905 15926933 -73577620 + (TG)n Simple_repeat Simple_repeat 2 29 0 891 305 95 49 chr17 15928319 15928573 -73575980 - L2 LINE L2 -1 3312 3071 2142 135 0 0 chr17 15928573 15928870 -73575683 + AluSq SINE Alu 1 297 -16 891 305 95 49 chr17 15928870 15929124 -73575429 - L2 LINE L2 -242 3071 2779 189 246 29 58 chr17 15929275 15929344 -73575209 - MIR3 SINE MIR -11 197 131 2444 148 43 45 chr17 15929444 15929890 -73574663 + MER65A LTR ERV1 1 445 0 323 121 24 24 chr17 15929941 15930024 -73574529 + CT-rich Low_complexity Low_complexity 1 83 0 664 146 15 44 chr17 15930165 15930302 -73574251 + MLT1E3 LTR MaLR 72 204 -420 260 244 13 51 chr17 15930433 15930511 -73574042 + MLT2C1 LTR ERVL 269 343 -54 1968 242 17 13 chr17 15930519 15931048 -73573505 + L1ME1 LINE L1 3736 4266 -1880 11085 207 22 39 chr17 15931063 15934465 -73570088 + L1PA10 LINE L1 10 3358 -3103 6526 51 1 0 chr17 15935801 15936584 -73567969 - L1PA6 LINE L1 0 6154 5371 228 135 0 0 chr17 15936551 15936588 -73567965 - L1M4 LINE L1 -743 5403 5367 * 7162 114 7 4 chr17 15936759 15939819 -73564734 + L1PA10 LINE L1 3340 6483 0 1900 250 26 30 chr17 15939820 15940130 -73564423 + L1ME1 LINE L1 4261 4570 -1576 2391 78 0 0 chr17 15940130 15940423 -73564130 - AluY SINE Alu -18 293 1 1900 250 26 30 chr17 15940423 15940688 -73563865 + L1ME1 LINE L1 4570 4834 -1312 757 41 31 0 chr17 15940693 15940790 -73563763 + L1P4 LINE L1 5385 5484 -684 2175 198 69 27 chr17 15940792 15941745 -73562808 + L1ME1 LINE L1 4842 5842 -324 569 200 44 37 chr17 15941809 15941944 -73562609 - MER3 DNA MER1_type -86 123 35 22 35 0 0 chr17 15943823 15943852 -73560701 + AT_rich Low_complexity Low_complexity 1 29 0 1516 231 114 33 chr17 15943852 15944371 -73560182 - LTR48B LTR ERV1 0 644 84 299 109 47 62 chr17 15944357 15944421 -73560132 - LTR29 LTR ERV1 -423 199 137 * 2477 74 3 0 chr17 15944870 15945179 -73559374 - AluSp SINE Alu -3 310 1 239 202 326 0 chr17 15945490 15945579 -73558974 - MIR SINE MIR 0 262 145 2344 94 7 0 chr17 15945704 15946003 -73558550 - AluSg SINE Alu -7 303 3 507 33 0 0 chr17 15947384 15947445 -73557108 + (GA)n Simple_repeat Simple_repeat 2 62 0 414 0 0 0 chr17 15947743 15947789 -73556764 + (CA)n Simple_repeat Simple_repeat 2 47 0 761 265 38 74 chr17 15948162 15948500 -73556053 - L1ME4a LINE L1 -198 5923 5599 2279 81 11 0 chr17 15948500 15948783 -73555770 - AluSx SINE Alu -15 297 12 761 265 38 74 chr17 15948783 15948836 -73555717 - L1ME4a LINE L1 -522 5599 5546 828 153 0 0 chr17 15949072 15949190 -73555363 - FLAM_C SINE Alu -15 118 1 271 318 112 16 chr17 15949266 15949508 -73555045 + HAL1 LINE L1 1454 1718 -789 497 246 103 10 chr17 15949670 15949840 -73554713 + MER39 LTR ERV1 1 187 -355 * 1990 143 36 15 chr17 15949808 15950143 -73554410 + MER39 LTR ERV1 361 702 -5 1626 206 0 31 chr17 15950180 15950501 -73554052 - AluJo SINE Alu -1 311 1 2135 105 3 3 chr17 15950760 15951054 -73553499 + AluSc SINE Alu 5 298 -11 305 278 52 63 chr17 15951054 15951306 -73553247 + L1M4 LINE L1 2275 2523 -3623 * 576 326 97 59 chr17 15951303 15951893 -73552660 + L1M4 LINE L1 3085 3716 -2430 2432 65 0 10 chr17 15951893 15952202 -73552351 + AluY SINE Alu 1 306 -5 576 326 97 59 chr17 15952202 15952429 -73552124 + L1M4 LINE L1 3716 3933 -2213 2167 113 0 13 chr17 15952745 15953046 -73551507 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr17 15954064 15954085 -73550468 + AT_rich Low_complexity Low_complexity 1 21 0 2676 45 0 3 chr17 15954115 15954424 -73550129 - AluY SINE Alu -3 308 1 541 133 0 0 chr17 15954505 15954595 -73549958 - L1MB8 LINE L1 0 6178 6089 7017 62 11 9 chr17 15954596 15956227 -73548326 - L1PA7 LINE L1 0 6154 4521 * 9034 101 14 5 chr17 15956210 15957428 -73547125 - L1P3 LINE L1 -5228 1233 5 6325 235 49 37 chr17 15957432 15960180 -73544373 - L1MB7 LINE L1 -83 6101 3292 512 275 46 85 chr17 15960373 15960762 -73543791 + L1MC4 LINE L1 5552 5925 -1883 456 227 146 11 chr17 15961283 15961444 -73543109 + MER5A DNA MER1_type 4 189 0 188 277 46 31 chr17 15961460 15961525 -73543028 - MER5B DNA MER1_type -9 169 104 400 290 78 33 chr17 15961664 15961909 -73542644 - MIR SINE MIR -2 260 5 205 262 0 0 chr17 15962359 15962401 -73542152 + MIR3 SINE MIR 143 184 -24 184 29 29 29 chr17 15963433 15963467 -73541086 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 238 337 32 32 chr17 15966486 15966581 -73537972 - L2 LINE L2 -9 3304 3210 432 330 112 28 chr17 15966802 15967123 -73537430 - L2 LINE L2 -552 2762 2415 1571 174 3 29 chr17 15967676 15967986 -73536567 - AluJo SINE Alu -10 302 1 224 245 21 75 chr17 15968170 15968264 -73536289 - L2 LINE L2 0 3313 3225 416 240 129 88 chr17 15968507 15968609 -73535944 + MER5B DNA MER1_type 1 114 -64 2104 101 6 28 chr17 15968609 15968926 -73535627 - AluSx SINE Alu -2 310 1 416 240 129 88 chr17 15968926 15968994 -73535559 + MER5B DNA MER1_type 114 178 0 238 251 43 12 chr17 15970540 15970635 -73533918 + MIR3 SINE MIR 61 162 -46 441 172 35 0 chr17 15970653 15970740 -73533813 - U13 snRNA snRNA -2 102 13 198 191 0 0 chr17 15972685 15972732 -73531821 + (TA)n Simple_repeat Simple_repeat 2 48 0 315 255 0 71 chr17 15972750 15972848 -73531705 + L1MC4 LINE L1 6613 6703 -1339 189 0 0 0 chr17 15973272 15973293 -73531260 + (T)n Simple_repeat Simple_repeat 1 21 0 278 237 17 0 chr17 15973874 15973933 -73530620 - L3 LINE CR1 -14 1563 1504 242 337 0 35 chr17 15974661 15974747 -73529806 - L2 LINE L2 -5 3308 3226 341 309 92 28 chr17 15974798 15974870 -73529683 + L1MC/D LINE L1 2132 2198 -3948 1771 125 7 7 chr17 15974870 15975142 -73529411 + AluSx SINE Alu 35 306 -6 341 309 92 28 chr17 15975142 15975286 -73529267 + L1MC/D LINE L1 2198 2362 -3784 253 291 114 34 chr17 15975393 15976105 -73528448 + L1MC/D LINE L1 2443 3211 -2935 305 302 0 0 chr17 15976157 15976263 -73528290 + L1MC/D LINE L1 4504 4609 -1537 255 191 17 69 chr17 15976507 15976680 -73527873 + (TATAA)n Simple_repeat Simple_repeat 1 164 0 369 344 119 9 chr17 15976712 15976939 -73527614 + L1MC/D LINE L1 4741 4992 -1154 314 274 27 45 chr17 15976946 15977142 -73527411 + L1MC/D LINE L1 5293 5494 -668 26 0 0 0 chr17 15977186 15977212 -73527341 + AT_rich Low_complexity Low_complexity 1 26 0 270 186 17 0 chr17 15977246 15977305 -73527248 - MADE1 DNA Mariner 0 80 21 279 197 54 35 chr17 15977427 15977543 -73527010 + L1MC/D LINE L1 5768 5892 -287 2271 41 6 47 chr17 15978592 15978912 -73525641 + AluY SINE Alu 1 307 -4 803 210 39 100 chr17 15979058 15979287 -73525266 - MER58A DNA MER1_type -9 215 1 2250 94 3 0 chr17 15979656 15979954 -73524599 + AluSc SINE Alu 1 299 -10 2373 60 7 0 chr17 15979954 15980255 -73524298 + AluY SINE Alu 1 303 -8 180 0 0 0 chr17 15981705 15981725 -73522828 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 2393 48 0 10 chr17 15982789 15983084 -73521469 - AluY SINE Alu -19 292 1 998 266 95 105 chr17 15983108 15984340 -73520213 + L2 LINE L2 2035 3313 0 341 272 139 51 chr17 15984343 15984501 -73520052 + L3 LINE CR1 1382 1553 -24 375 23 0 0 chr17 15985257 15985301 -73519252 + (CTG)n Simple_repeat Simple_repeat 1 44 0 333 269 92 15 chr17 15986186 15986316 -73518237 - L1ME4a LINE L1 -1 6120 5981 525 304 293 0 chr17 15986512 15986871 -73517682 + L2 LINE L2 2848 3311 -2 698 347 113 21 chr17 15986948 15987542 -73517011 - L2 LINE L2 -452 2862 2201 2204 80 0 3 chr17 15987542 15987828 -73516725 + AluSp SINE Alu 1 285 -28 698 347 113 21 chr17 15987828 15987885 -73516668 - L2 LINE L2 -1113 2201 2151 842 293 20 33 chr17 15988221 15988525 -73516028 + MLT1J LTR MaLR 205 504 -7 1781 84 8 0 chr17 15989232 15989470 -73515083 + AluSq SINE Alu 6 245 -68 204 214 24 0 chr17 15992090 15992132 -73512421 + GA-rich Low_complexity Low_complexity 4 46 0 2014 81 39 36 chr17 15992526 15992835 -73511718 + AluSg SINE Alu 1 310 0 211 211 19 0 chr17 15995507 15995559 -73508994 + GA-rich Low_complexity Low_complexity 1 53 0 210 143 0 0 chr17 15996436 15996471 -73508082 + (CA)n Simple_repeat Simple_repeat 1 35 0 196 171 57 0 chr17 15996684 15996719 -73507834 - L2 LINE L2 -18 3254 3218 611 295 84 9 chr17 15996749 15996976 -73507577 + MIR SINE MIR 2 245 -17 398 81 32 0 chr17 15997075 15997137 -73507416 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 192 215 76 63 chr17 15997284 15997363 -73507190 - MIR SINE MIR -5 257 178 319 148 33 16 chr17 15997398 15997459 -73507094 - L1ME3A LINE L1 -5 6165 6104 264 285 42 56 chr17 15999333 15999477 -73505076 - MER5B DNA MER1_type -26 152 11 354 123 0 0 chr17 15999607 15999664 -73504889 + (TG)n Simple_repeat Simple_repeat 1 57 0 916 252 28 24 chr17 16000521 16000771 -73503782 - MIR SINE MIR -1 261 11 341 321 23 38 chr17 16001243 16001374 -73503179 - MIR SINE MIR -64 144 16 526 190 18 18 chr17 16001675 16001838 -73502715 + GA-rich Low_complexity Low_complexity 1 163 0 491 278 24 47 chr17 16002965 16003220 -73501333 + L1ME4a LINE L1 5617 5865 -256 322 285 87 14 chr17 16003243 16003422 -73501131 - MIR SINE MIR -13 249 12 205 225 12 12 chr17 16004156 16004236 -73500317 + CT-rich Low_complexity Low_complexity 3 82 0 254 290 21 11 chr17 16004429 16004522 -73500031 + MER103 DNA DNA 73 166 0 1906 211 55 45 chr17 16004956 16005487 -73499066 + LTR55 LTR ERV 3 538 -10 200 244 0 0 chr17 16006277 16006318 -73498235 - L2 LINE L2 -4 3309 3269 840 240 81 51 chr17 16006357 16006845 -73497708 + MLT1H LTR MaLR 15 549 0 258 224 15 0 chr17 16007199 16007266 -73497287 - MER5C DNA MER1_type -1 323 256 355 235 34 42 chr17 16007342 16007461 -73497092 - MER5C DNA MER1_type -202 122 5 2214 130 22 33 chr17 16007632 16008000 -73496553 - THE1B LTR MaLR 0 364 1 28 0 0 0 chr17 16008146 16008174 -73496379 + AT_rich Low_complexity Low_complexity 1 28 0 3630 55 0 0 chr17 16008323 16008760 -73495793 - L1PA5 LINE L1 -8 6146 5710 2208 95 0 14 chr17 16009874 16010195 -73494358 - AluSx SINE Alu 0 312 1 1314 194 89 31 chr17 16010536 16010861 -73493692 - MER2 DNA MER2_type 0 344 1 180 283 0 0 chr17 16010875 16010921 -73493632 - MIR SINE MIR -139 123 78 534 267 6 72 chr17 16011286 16011525 -73493028 + LTR16A1 LTR ERVL 251 457 0 537 309 49 45 chr17 16011795 16012018 -73492535 + Charlie8 DNA MER1_type 4 227 -2190 542 258 74 46 chr17 16012031 16012364 -73492189 - MLT1J2 LTR MaLR 0 450 70 1080 212 51 10 chr17 16013246 16013557 -73490996 - MER33 DNA MER1_type -5 319 1 324 313 6 62 chr17 16013759 16013938 -73490615 - LTR16C LTR ERVL 0 491 323 843 210 0 0 chr17 16013990 16014152 -73490401 - L1MEc LINE L1 -5585 811 650 435 262 65 0 chr17 16014253 16014360 -73490193 - LTR16C LTR ERVL -258 233 120 241 256 0 39 chr17 16014531 16014609 -73489944 - L1MA10 LINE L1 -2 6332 6258 * 4185 242 93 27 chr17 16014599 16014755 -73489798 - L1MEc LINE L1 -4738 1658 1514 827 233 23 6 chr17 16014755 16014927 -73489626 - MER45A DNA AcHobo -3 175 1 4185 242 93 27 chr17 16014927 16015184 -73489369 - L1MEc LINE L1 -4882 1514 1275 351 0 0 0 chr17 16015184 16015223 -73489330 + (CA)n Simple_repeat Simple_repeat 2 40 0 4185 242 93 27 chr17 16015223 16015259 -73489294 - L1MEc LINE L1 -5121 1275 1243 1873 151 41 0 chr17 16015259 16015551 -73489002 - AluSx SINE Alu -8 304 1 4185 242 93 27 chr17 16015551 16016282 -73488271 - L1MEc LINE L1 -5153 1243 351 180 0 0 0 chr17 16016282 16016302 -73488251 + (TC)n Simple_repeat Simple_repeat 1 20 0 4185 242 93 27 chr17 16016302 16016641 -73487912 - L1MEc LINE L1 -6045 351 36 217 260 198 10 chr17 16017339 16017435 -73487118 + L2 LINE L2 3159 3272 0 1210 228 71 15 chr17 16017902 16018227 -73486326 - MER2 DNA MER2_type 0 344 2 507 33 0 0 chr17 16019159 16019220 -73485333 + (TTTTA)n Simple_repeat Simple_repeat 2 62 0 1835 161 29 0 chr17 16019223 16019497 -73485056 - AluJo SINE Alu -30 282 1 2423 143 16 0 chr17 16019568 16019947 -73484606 - MLT1B LTR MaLR 0 390 6 618 224 54 24 chr17 16020359 16020564 -73483989 - L1M4 LINE L1 -825 5321 5111 745 274 207 18 chr17 16022156 16022499 -73482054 + MLT1I LTR MaLR 1 408 -1 2306 96 0 3 chr17 16022890 16023182 -73481371 + AluSc SINE Alu 1 291 -18 758 172 0 8 chr17 16023446 16023580 -73480973 - FLAM_C SINE Alu -10 133 1 230 228 88 0 chr17 16024308 16024365 -73480188 - L1M4 LINE L1 -1300 4846 4785 2003 151 89 25 chr17 16025008 16025412 -73479141 + MSTB1 LTR MaLR 3 432 0 568 188 10 0 chr17 16026501 16026597 -73477956 - MER3 DNA MER1_type -112 97 1 1649 73 162 4 chr17 16026966 16027225 -73477328 - AluYa8 SINE Alu 0 300 1 194 270 81 27 chr17 16027502 16027613 -73476940 + L2 LINE L2 2649 2765 -549 672 140 158 117 chr17 16027620 16027706 -73476847 - MER45A DNA AcHobo -1403 178 97 2149 131 3 0 chr17 16027706 16028004 -73476549 + AluSx SINE Alu 1 299 -13 672 140 158 117 chr17 16028004 16028088 -73476465 - MER45A DNA AcHobo -1484 97 1 340 368 70 30 chr17 16028124 16028453 -73476100 + L2 LINE L2 2927 3268 -4 21 36 0 0 chr17 16029029 16029057 -73475496 + AT_rich Low_complexity Low_complexity 1 28 0 26 50 0 0 chr17 16029092 16029132 -73475421 + AT_rich Low_complexity Low_complexity 1 40 0 2312 98 3 13 chr17 16030515 16030822 -73473731 - AluSp SINE Alu -9 304 1 550 277 130 28 chr17 16030982 16031235 -73473318 - MLT1I LTR MaLR 0 409 131 21 0 0 0 chr17 16031598 16031619 -73472934 + AT_rich Low_complexity Low_complexity 1 21 0 262 335 84 19 chr17 16031729 16031884 -73472669 + MIR SINE MIR 2 166 -96 2912 10 0 3 chr17 16032168 16032481 -73472072 + AluYb8 SINE Alu 1 312 -6 1003 243 178 48 chr17 16032635 16033092 -73471461 - MLT1G1 LTR MaLR -3 592 35 1513 176 0 4 chr17 16034001 16034245 -73470308 - AluJo SINE Alu -38 274 32 236 341 11 0 chr17 16034348 16034436 -73470117 - MER117 DNA MER1_type -108 89 1 21 0 0 0 chr17 16035918 16035939 -73468614 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 16037157 16037185 -73467368 + AT_rich Low_complexity Low_complexity 1 28 0 294 245 11 32 chr17 16037300 16037394 -73467159 - MIR3 SINE MIR -5 203 112 200 368 26 13 chr17 16037606 16037758 -73466795 + L2 LINE L2 2898 3051 -221 360 0 0 0 chr17 16038956 16038996 -73465557 + (TG)n Simple_repeat Simple_repeat 1 40 0 343 295 33 8 chr17 16040192 16040314 -73464239 + MIR SINE MIR 28 152 -110 243 213 0 49 chr17 16040380 16040441 -73464112 + (CAT)n Simple_repeat Simple_repeat 2 59 0 210 328 0 0 chr17 16040912 16040973 -73463580 + L3b LINE CR1 1281 1341 -242 981 97 62 28 chr17 16041227 16041403 -73463150 - L1MB3 LINE L1 -1 6182 6001 629 265 20 20 chr17 16041863 16042063 -73462490 - MER63A DNA MER1_type -10 200 1 409 182 98 53 chr17 16042182 16042314 -73462239 + MER69A DNA AcHobo 8 145 -32 2175 127 7 74 chr17 16043180 16043598 -73460955 + MLT1B LTR MaLR 1 390 0 784 93 0 19 chr17 16044212 16044320 -73460233 + U6 snRNA snRNA 2 107 0 1173 109 20 30 chr17 16044320 16044521 -73460032 + L1MA5A LINE L1 6095 6293 -4 640 293 96 43 chr17 16045658 16046098 -73458455 + L1ME4a LINE L1 5379 5841 -280 230 163 102 0 chr17 16046133 16046182 -73458371 + L1MB8 LINE L1 6117 6170 -8 2301 102 10 0 chr17 16046370 16046673 -73457880 - AluSx SINE Alu -6 306 1 499 298 130 14 chr17 16047885 16048170 -73456383 - L2 LINE L2 -5 3308 2991 * 1203 274 165 18 chr17 16048157 16048715 -73455838 - L2 LINE L2 -488 2826 2187 649 246 34 6 chr17 16049302 16049481 -73455072 + L1PB4 LINE L1 5961 6144 -12 2639 64 0 0 chr17 16050844 16051155 -73453398 - AluY SINE Alu 0 311 1 25 0 0 0 chr17 16051349 16051374 -73453179 + AT_rich Low_complexity Low_complexity 1 25 0 1506 172 8 27 chr17 16051411 16051672 -73452881 - AluJo SINE Alu -22 290 35 719 129 8 32 chr17 16051693 16051817 -73452736 - L1MA3 LINE L1 -5 6300 6180 326 187 40 27 chr17 16052885 16052960 -73451593 - L1ME LINE L1 -501 5620 5545 359 286 106 42 chr17 16053094 16053451 -73451102 - L1ME LINE L1 -743 5403 5024 2481 75 0 0 chr17 16053880 16054175 -73450378 - AluY SINE Alu -16 295 1 503 281 39 6 chr17 16054908 16055086 -73449467 + L1PB4 LINE L1 5961 6144 -12 181 312 65 13 chr17 16055115 16055192 -73449361 + MIR SINE MIR 20 100 -162 3408 196 30 22 chr17 16056786 16057085 -73447468 - L1MB8 LINE L1 -6 6172 5874 684 279 91 29 chr17 16057085 16057599 -73446954 - L1PB1 LINE L1 -271 5880 5248 * 2995 206 51 19 chr17 16057593 16058315 -73446238 - L1MB8 LINE L1 -944 5202 4458 737 246 18 12 chr17 16058326 16058497 -73446056 + MER5B DNA MER1_type 6 177 -1 657 253 39 91 chr17 16059808 16060102 -73444451 + L1ME4a LINE L1 5562 5833 -288 2274 108 7 0 chr17 16060102 16060397 -73444156 + AluSq SINE Alu 1 297 -16 657 253 39 91 chr17 16060397 16060486 -73444067 + L1ME4a LINE L1 5833 5925 -196 230 280 121 8 chr17 16061663 16061795 -73442758 + L1ME LINE L1 5770 5916 -205 617 319 72 16 chr17 16061830 16062150 -73442403 - L1ME LINE L1 -451 5670 5333 2797 135 29 5 chr17 16063165 16063581 -73440972 + MSTA LTR MaLR 3 428 0 1414 120 9 60 chr17 16064823 16065056 -73439497 + AluSx SINE Alu 61 281 -31 195 42 0 0 chr17 16065059 16065083 -73439470 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 349 274 130 7 chr17 16065083 16065229 -73439324 + L1MEc LINE L1 39 202 -6194 565 209 0 26 chr17 16065231 16065346 -73439207 + MIR SINE MIR 70 181 -81 184 291 47 23 chr17 16065541 16065627 -73438926 + MIR SINE MIR 165 252 -10 233 238 24 24 chr17 16065896 16065980 -73438573 - L1MC/D LINE L1 -1926 5882 5799 437 0 0 19 chr17 16066589 16066643 -73437910 + (TTTTA)n Simple_repeat Simple_repeat 2 54 0 2214 74 0 14 chr17 16066645 16066929 -73437624 - AluY SINE Alu -31 280 1 1658 152 48 24 chr17 16066931 16067221 -73437332 - AluJb SINE Alu -15 297 1 1531 301 117 22 chr17 16067752 16068752 -73435801 + L1ME3A LINE L1 2 1096 -5300 1929 266 65 27 chr17 16068779 16068970 -73435583 + L1ME3A LINE L1 1136 1318 -5078 267 103 0 0 chr17 16068970 16069009 -73435544 + (CA)n Simple_repeat Simple_repeat 2 40 0 1929 266 65 27 chr17 16069009 16069665 -73434888 + L1ME3A LINE L1 1318 2068 -4328 1580 188 141 44 chr17 16069665 16070139 -73434414 + Charlie1b DNA MER1_type 4 523 0 1278 251 113 34 chr17 16070184 16070428 -73434125 + L1ME3A LINE L1 2108 2331 -3884 2384 94 0 0 chr17 16070428 16070736 -73433817 + AluSg1 SINE Alu 1 308 -1 1278 251 113 34 chr17 16070736 16071068 -73433485 + L1ME3A LINE L1 2331 2697 -3518 934 259 4 4 chr17 16071056 16071295 -73433258 + L1ME3A LINE L1 3416 3654 -2561 * 2133 61 13 55 chr17 16071371 16071682 -73432871 - AluY SINE Alu -13 298 1 1964 195 50 8 chr17 16071848 16072228 -73432325 + MSTD LTR MaLR 1 396 0 746 248 112 10 chr17 16072808 16073102 -73431451 + L1ME3A LINE L1 5590 5913 -326 1972 73 48 48 chr17 16073134 16073423 -73431130 + AluSg SINE Alu 1 289 -21 348 258 114 34 chr17 16075022 16075207 -73429346 - MIR SINE MIR -36 226 31 435 259 9 9 chr17 16076390 16076498 -73428055 + L2 LINE L2 3160 3267 -5 326 245 22 86 chr17 16076889 16076958 -73427595 + L2 LINE L2 2818 2876 -438 2084 108 3 11 chr17 16076958 16077276 -73427277 - AluSp SINE Alu 0 316 1 326 245 22 86 chr17 16077276 16077344 -73427209 + L2 LINE L2 2876 2947 -367 653 286 34 50 chr17 16078369 16078631 -73425922 - MIR SINE MIR 0 262 5 330 291 0 0 chr17 16079464 16079567 -73424986 + MER103 DNA DNA 1 103 -63 237 33 0 0 chr17 16079867 16079897 -73424656 + (TG)n Simple_repeat Simple_repeat 1 30 0 1440 193 92 13 chr17 16079956 16080272 -73424281 + MER2 DNA MER2_type 2 342 -3 225 266 16 64 chr17 16080279 16080467 -73424086 + G-rich Low_complexity Low_complexity 1 179 0 236 277 15 15 chr17 16081147 16081212 -73423341 - MIR SINE MIR -114 148 84 259 340 21 31 chr17 16081294 16081391 -73423162 + L2 LINE L2 3105 3200 -72 528 223 122 32 chr17 16081405 16081593 -73422960 - MIR SINE MIR -38 224 20 4034 182 78 3 chr17 16082828 16083298 -73421255 - MER63C DNA MER1_type -130 930 496 198 0 0 0 chr17 16083298 16083320 -73421233 + (CA)n Simple_repeat Simple_repeat 1 22 0 4034 182 78 3 chr17 16083320 16083701 -73420852 - MER63C DNA MER1_type -564 496 16 832 305 60 42 chr17 16084344 16084826 -73419727 + LTR16C LTR ERVL 1 491 0 399 295 11 0 chr17 16086124 16086219 -73418334 - MER5A DNA MER1_type -24 165 70 430 215 65 9 chr17 16086589 16086696 -73417857 - MIR3 SINE MIR -9 199 87 185 193 0 35 chr17 16087119 16087176 -73417377 + (CATA)n Simple_repeat Simple_repeat 2 56 0 244 313 9 61 chr17 16087960 16088075 -73416478 + MIR3 SINE MIR 10 118 -90 693 70 0 0 chr17 16088081 16088167 -73416386 + L1PA5 LINE L1 11 96 -6050 38857 46 4 1 chr17 16088167 16093670 -73410883 + L1PA5 LINE L1 623 6141 -13 486 49 0 0 chr17 16093670 16093731 -73410822 + (TA)n Simple_repeat Simple_repeat 2 62 0 38857 46 4 1 chr17 16093731 16093742 -73410811 + L1PA5 LINE L1 6141 6150 -4 205 171 0 0 chr17 16093878 16093913 -73410640 + A-rich Low_complexity Low_complexity 3 37 0 270 256 51 0 chr17 16093913 16093991 -73410562 + MIR SINE MIR 111 192 -70 350 288 204 12 chr17 16094744 16094994 -73409559 + Charlie2 DNA MER1_type 29 326 -2456 2195 206 93 65 chr17 16094994 16095720 -73408833 + Charlie2 DNA MER1_type 1856 2616 -246 2146 54 8 0 chr17 16095720 16096005 -73408548 - AluY SINE Alu 0 308 22 2195 206 93 65 chr17 16096005 16096186 -73408367 + Charlie2 DNA MER1_type 2616 2790 -72 1022 127 0 0 chr17 16096189 16096346 -73408207 + L1MA2 LINE L1 6046 6202 -102 463 121 0 0 chr17 16096346 16096405 -73408148 + L1MA3 LINE L1 6239 6304 -1 2405 94 0 0 chr17 16096857 16097155 -73407398 + AluSg SINE Alu 1 298 -12 1896 108 31 83 chr17 16098008 16098333 -73406220 - AluSg SINE Alu -2 308 1 401 306 61 5 chr17 16098412 16098519 -73406034 + MER5A DNA MER1_type 6 129 -60 2161 70 56 0 chr17 16098519 16098804 -73405749 - AluYa5 SINE Alu -10 301 1 401 306 61 5 chr17 16098804 16098868 -73405685 + MER5A DNA MER1_type 129 188 -1 3168 239 9 24 chr17 16099222 16100020 -73404533 + L1M4 LINE L1 3680 4465 -1681 2176 115 3 3 chr17 16100026 16100331 -73404222 - AluSx SINE Alu -7 305 1 2210 100 3 7 chr17 16100526 16100827 -73403726 - AluSx SINE Alu -12 300 1 442 311 50 31 chr17 16101227 16101388 -73403165 - MIR3 SINE MIR -9 199 36 1981 93 0 0 chr17 16101999 16102247 -73402306 + AluY SINE Alu 43 290 -21 383 254 175 87 chr17 16102367 16102997 -73401556 - L1MC4a LINE L1 -733 5418 5269 1831 154 62 22 chr17 16103204 16103528 -73401025 - MER1B DNA MER1_type 0 337 1 267 294 77 0 chr17 16103547 16103690 -73400863 - L1MC4a LINE L1 -2172 3974 3821 24 50 0 33 chr17 16103696 16103720 -73400833 + AT_rich Low_complexity Low_complexity 1 24 -34 2054 109 51 0 chr17 16103720 16104014 -73400539 - AluSq SINE Alu -4 309 1 24 50 0 33 chr17 16104014 16104049 -73400504 + AT_rich Low_complexity Low_complexity 24 58 0 268 261 106 43 chr17 16104110 16104298 -73400255 - HAL1 LINE L1 -209 2298 2099 24 0 0 0 chr17 16104300 16104324 -73400229 + AT_rich Low_complexity Low_complexity 1 24 0 317 271 26 65 chr17 16104517 16104672 -73399881 - HAL1 LINE L1 -699 1808 1660 5791 122 39 34 chr17 16104686 16105170 -73399383 - Tigger3(Golem) DNA MER2_type -1 3028 2548 2393 62 0 16 chr17 16105170 16105478 -73399075 + AluY SINE Alu 1 303 -8 5791 122 39 34 chr17 16105478 16105607 -73398946 - Tigger3(Golem) DNA MER2_type -481 2548 2421 2315 101 3 0 chr17 16105607 16105904 -73398649 + AluSp SINE Alu 1 298 -15 5791 122 39 34 chr17 16105904 16106272 -73398281 - Tigger3(Golem) DNA MER2_type -608 2421 2041 734 226 14 7 chr17 16106244 16106390 -73398163 - Tigger3(Golem) DNA MER2_type -2882 147 1 * 1022 247 113 111 chr17 16106391 16106820 -73397733 - HAL1 LINE L1 -860 1647 1220 2368 99 3 0 chr17 16106820 16107123 -73397430 + AluSx SINE Alu 1 304 -8 1022 247 113 111 chr17 16107123 16107573 -73396980 - HAL1 LINE L1 -1287 1220 767 252 282 15 122 chr17 16107901 16108163 -73396390 - HAL1 LINE L1 -2169 338 105 2555 137 45 9 chr17 16108613 16109060 -73395493 + L1MB3 LINE L1 5717 6179 -4 2230 94 3 0 chr17 16109364 16109673 -73394880 - AluSp SINE Alu -3 310 1 365 244 118 17 chr17 16111140 16111259 -73393294 - MIR SINE MIR -98 164 34 224 306 115 87 chr17 16111326 16111509 -73393044 + MIR SINE MIR 42 229 -33 2334 65 0 23 chr17 16112260 16112566 -73391987 + AluY SINE Alu 1 299 -12 2171 108 0 9 chr17 16112826 16113142 -73391411 - AluSq SINE Alu 0 313 1 1863 225 67 44 chr17 16113279 16113749 -73390804 + MER82 DNA MER2_type 90 576 -77 2128 85 0 36 chr17 16113749 16114054 -73390499 - AluY SINE Alu -17 294 1 1863 225 67 44 chr17 16114054 16114134 -73390419 + MER82 DNA MER2_type 576 653 0 739 319 76 0 chr17 16114165 16114403 -73390150 + MIR SINE MIR 1 256 -6 255 266 101 9 chr17 16115407 16115516 -73389037 + MER117 DNA MER1_type 1 119 -78 537 272 71 28 chr17 16115746 16115971 -73388582 + MIR SINE MIR 31 262 0 475 272 82 6 chr17 16116368 16116526 -73388027 - MIR SINE MIR -90 172 3 632 272 63 47 chr17 16116529 16116830 -73387723 - L1ME4a LINE L1 -295 5826 5521 398 273 62 3 chr17 16117001 16117136 -73387417 - MIR SINE MIR -66 142 2 329 320 47 52 chr17 16117390 16117562 -73386991 - MIR3 SINE MIR -18 190 20 258 105 0 0 chr17 16117747 16117785 -73386768 + (A)n Simple_repeat Simple_repeat 1 38 0 610 145 0 86 chr17 16117794 16117911 -73386642 + AluJo SINE Alu 29 135 -177 225 203 29 14 chr17 16118022 16118091 -73386462 + L1P LINE L1 5304 5373 -781 1549 192 46 8 chr17 16118428 16118818 -73385735 + L1ME1 LINE L1 5206 5604 -562 4834 178 70 23 chr17 16118820 16119225 -73385328 + L1MD2 LINE L1 5186 5571 -788 2229 67 37 0 chr17 16119225 16119523 -73385030 - AluSc SINE Alu 0 309 1 4834 178 70 23 chr17 16119523 16120238 -73384315 + L1MD2 LINE L1 5571 6357 -2 1358 197 51 120 chr17 16120220 16120752 -73383801 + L1ME1 LINE L1 5571 6065 -101 * 289 204 174 23 chr17 16120705 16120837 -73383716 + L1MA10 LINE L1 6178 6329 -5 * 1320 234 87 65 chr17 16121860 16122352 -73382201 + MLT1J LTR MaLR 1 503 -8 292 344 30 23 chr17 16123233 16123364 -73381189 - L2 LINE L2 -176 3096 2965 2366 187 24 2 chr17 16124514 16124931 -73379622 + MSTB LTR MaLR 1 426 0 272 311 39 0 chr17 16125424 16125527 -73379026 - MIR3 SINE MIR -3 205 99 183 353 82 55 chr17 16126512 16126767 -73377786 + L2 LINE L2 2716 2977 -337 669 278 55 93 chr17 16126893 16126949 -73377604 - MLT1J LTR MaLR -147 364 307 2146 107 0 0 chr17 16126949 16127239 -73377314 + AluSg SINE Alu 1 290 -20 669 278 55 93 chr17 16127239 16127527 -73377026 - MLT1J LTR MaLR -204 307 33 301 174 174 0 chr17 16128548 16128617 -73375936 - MIR SINE MIR -72 190 110 1406 107 5 0 chr17 16128655 16128872 -73375681 - AluSq SINE Alu 0 304 87 268 98 0 273 chr17 16129340 16129395 -73375158 + L1MB3 LINE L1 6088 6088 -95 2404 70 0 10 chr17 16129395 16129708 -73374845 + AluY SINE Alu 1 310 -1 268 98 0 273 chr17 16129708 16129784 -73374769 + L1MB3 LINE L1 6088 6183 0 2047 125 3 3 chr17 16130107 16130459 -73374094 + AluSx SINE Alu 1 352 0 1320 261 80 39 chr17 16131445 16131932 -73372621 - HAL1 LINE L1 -2000 507 1 1738 138 4 14 chr17 16132691 16132966 -73371587 + AluSx SINE Alu 13 284 -28 333 0 0 0 chr17 16132982 16133019 -73371534 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 273 384 75 31 chr17 16133136 16133328 -73371225 - L2 LINE L2 0 3272 3090 8238 111 9 46 chr17 16133328 16133483 -73371070 - HSMAR2 DNA Mariner -2 1300 1141 2422 58 0 19 chr17 16133483 16133794 -73370759 + AluY SINE Alu 1 305 -6 8238 111 9 46 chr17 16133794 16133834 -73370719 - HSMAR2 DNA Mariner -161 1141 1101 2308 88 7 3 chr17 16133834 16134141 -73370412 - AluSx SINE Alu -4 308 1 8238 111 9 46 chr17 16134141 16135293 -73369260 - HSMAR2 DNA Mariner -201 1101 2 273 384 75 31 chr17 16135293 16135394 -73369159 - L2 LINE L2 -182 3090 2966 365 343 161 16 chr17 16135454 16135877 -73368676 - L2 LINE L2 -460 2854 2371 2288 117 17 50 chr17 16136671 16137074 -73367479 + MLT1B LTR MaLR 1 390 0 203 275 14 29 chr17 16137149 16137218 -73367335 + MIR SINE MIR 8 75 -187 517 274 60 35 chr17 16138237 16138386 -73366167 - MIR3 SINE MIR -39 169 17 441 252 10 0 chr17 16138405 16138508 -73366045 - MER33 DNA MER1_type -1 362 259 581 202 0 0 chr17 16138516 16138610 -73365943 - Tigger3(Golem) DNA MER2_type -18 3011 2918 341 227 80 0 chr17 16138608 16138683 -73365870 - Tigger3(Golem) DNA MER2_type -2948 81 1 * 838 206 66 66 chr17 16139654 16139955 -73364598 + MER33 DNA MER1_type 24 324 0 500 180 150 0 chr17 16140352 16140452 -73364101 + L1MD2 LINE L1 6037 6151 -208 316 109 0 0 chr17 16140457 16140503 -73364050 + L1MD1 LINE L1 6174 6219 -23 2598 136 56 21 chr17 16140515 16140664 -73363889 + L1MB3 LINE L1 5681 5823 -360 2161 106 7 0 chr17 16140664 16140967 -73363586 + AluSx SINE Alu 2 306 -6 2598 136 56 21 chr17 16140967 16141250 -73363303 + L1MB3 LINE L1 5823 6134 -49 1830 151 3 22 chr17 16141250 16141568 -73362985 + 7SLRNA srpRNA srpRNA 1 312 -8 2598 136 56 21 chr17 16141568 16141613 -73362940 + L1MB3 LINE L1 6134 6176 -7 246 32 0 0 chr17 16142141 16142172 -73362381 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 325 280 120 47 chr17 16143522 16143672 -73360881 + HAL1b LINE L1 1188 1348 0 1614 165 26 10 chr17 16143750 16144053 -73360500 + AluJb SINE Alu 1 308 -4 27 0 0 0 chr17 16144196 16144223 -73360330 + AT_rich Low_complexity Low_complexity 1 27 0 1534 182 40 85 chr17 16145151 16145552 -73359001 - MLT1B LTR MaLR 0 390 8 216 263 105 79 chr17 16147368 16147520 -73357033 - L2 LINE L2 -32 3281 3126 264 329 102 22 chr17 16147679 16147816 -73356737 - L3 LINE CR1 -3 1574 1427 2098 119 0 0 chr17 16149496 16149790 -73354763 - AluSx SINE Alu -16 296 3 2294 61 0 3 chr17 16149870 16150163 -73354390 + AluY SINE Alu 3 294 -17 651 235 44 49 chr17 16150265 16150448 -73354105 + MER63A DNA MER1_type 27 208 -2 395 252 25 17 chr17 16150517 16150636 -73353917 + MIR SINE MIR 129 248 -14 856 308 76 50 chr17 16152373 16153028 -73351525 + L1MC4a LINE L1 4723 5394 -752 1706 66 4 85 chr17 16153083 16153284 -73351269 - L1P LINE L1 -766 5380 5164 198 0 0 0 chr17 16153284 16153306 -73351247 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1706 66 4 85 chr17 16153306 16153319 -73351234 - L1P LINE L1 -982 5164 5152 1777 79 12 8 chr17 16153319 16153560 -73350993 - AluY SINE Alu -54 257 16 1706 66 4 85 chr17 16153560 16153615 -73350938 - L1P LINE L1 -994 5152 5132 2184 55 0 7 chr17 16153615 16153884 -73350669 - L1PA8 LINE L1 -191 5981 5715 995 61 7 41 chr17 16153884 16154030 -73350523 + L1PA8 LINE L1 6026 6167 -5 2184 55 0 7 chr17 16154030 16154048 -73350505 - L1PA8 LINE L1 -457 5715 5698 296 378 0 0 chr17 16154034 16154145 -73350408 + L1MC4a LINE L1 5482 5592 -529 * 418 274 83 6 chr17 16154188 16154345 -73350208 + L1MC4a LINE L1 5695 5863 -1945 589 256 152 105 chr17 16154435 16154529 -73350024 - L2 LINE L2 -4 3309 3221 2023 90 20 17 chr17 16154529 16154828 -73349725 + AluSq SINE Alu 13 312 -1 589 256 152 105 chr17 16154828 16154878 -73349675 - L2 LINE L2 -92 3221 3175 2236 85 0 3 chr17 16154878 16155183 -73349370 - AluY SINE Alu -7 304 1 589 256 152 105 chr17 16155183 16155612 -73348941 - L2 LINE L2 -138 3175 2725 1173 219 17 41 chr17 16155910 16156202 -73348351 - LTR16C LTR ERVL 0 491 207 2072 116 7 7 chr17 16156434 16156735 -73347818 + AluSx SINE Alu 1 301 -11 202 284 45 0 chr17 16157230 16157297 -73347256 + MIR3 SINE MIR 98 167 -41 369 327 19 19 chr17 16157377 16157536 -73347017 - MARNA DNA Mariner -388 198 40 463 323 24 12 chr17 16157855 16158022 -73346531 + MER5A DNA MER1_type 8 176 -13 1294 184 46 35 chr17 16158088 16158606 -73345947 - MLT1F1 LTR MaLR 0 567 1 2445 56 3 0 chr17 16158610 16158913 -73345640 + AluY SINE Alu 1 304 -7 195 374 30 30 chr17 16158920 16158978 -73345575 + L2 LINE L2 2922 2979 -293 321 47 0 0 chr17 16158978 16159021 -73345532 + (CA)n Simple_repeat Simple_repeat 2 44 0 195 374 30 30 chr17 16159021 16159080 -73345473 + L2 LINE L2 2978 3039 -233 400 319 9 9 chr17 16159080 16159196 -73345357 + MER91B DNA MER1_type 1 116 -74 1870 155 3 3 chr17 16159704 16159994 -73344559 + MLT1A1 LTR MaLR 1 290 -75 245 319 59 7 chr17 16160090 16160225 -73344328 + L1MC4a LINE L1 5788 5929 -1879 261 248 40 120 chr17 16160280 16160405 -73344148 + MER91C DNA MER1_type 26 140 0 349 231 73 74 chr17 16160736 16161036 -73343517 + L1ME4a LINE L1 5697 6017 -104 1328 207 90 16 chr17 16161155 16161522 -73343031 - Charlie4a DNA MER1_type -94 414 21 2186 81 0 66 chr17 16161833 16162167 -73342386 - AluSx SINE Alu 0 312 1 261 185 0 0 chr17 16162202 16162267 -73342286 + (ATGGTG)n Simple_repeat Simple_repeat 4 68 0 * 662 202 6 0 chr17 16162254 16162432 -73342121 + (TGG)n Simple_repeat Simple_repeat 2 180 0 23 54 0 0 chr17 16163410 16163447 -73341106 + AT_rich Low_complexity Low_complexity 1 37 0 275 167 26 64 chr17 16163467 16163545 -73341008 + GA-rich Low_complexity Low_complexity 3 77 0 288 327 45 0 chr17 16164825 16164935 -73339618 - L2 LINE L2 -2 3311 3197 189 0 0 0 chr17 16166537 16166558 -73337995 + (A)n Simple_repeat Simple_repeat 1 21 0 2144 90 10 16 chr17 16166768 16167078 -73337475 - AluSq SINE Alu -5 308 1 2043 122 3 3 chr17 16168334 16168638 -73335915 + AluSx SINE Alu 2 305 -7 1641 209 171 48 chr17 16169669 16170358 -73334195 + LTR50 LTR ERVL 15 788 -7 197 303 219 0 chr17 16171315 16171427 -73333126 + MIR SINE MIR 78 215 -47 629 292 50 5 chr17 16171427 16171646 -73332907 + MIR SINE MIR 1 229 -33 313 234 315 0 chr17 16171676 16171787 -73332766 - MIR SINE MIR -71 191 46 3740 32 2 2 chr17 16172520 16172960 -73331593 + L1PA5 LINE L1 5707 6146 -8 526 146 67 0 chr17 16173708 16173797 -73330756 - MER5A DNA MER1_type -1 188 94 368 180 0 0 chr17 16174061 16174122 -73330431 - MER5A DNA MER1_type -125 64 4 827 259 5 5 chr17 16174133 16174322 -73330231 - MER5A DNA MER1_type 0 189 1 225 265 265 15 chr17 16174860 16174992 -73329561 - L3 LINE CR1 -39 1538 1374 2200 116 3 0 chr17 16174992 16175303 -73329250 + AluSx SINE Alu 1 312 0 211 281 35 0 chr17 16176034 16176091 -73328462 + MIR SINE MIR 88 146 -116 1757 156 16 25 chr17 16176131 16176446 -73328107 - AluJo SINE Alu 0 312 1 574 267 41 6 chr17 16177189 16177361 -73327192 - MER5B DNA MER1_type 0 178 1 22 0 0 0 chr17 16177392 16177414 -73327139 + AT_rich Low_complexity Low_complexity 1 22 0 1011 113 7 0 chr17 16177436 16177577 -73326976 + AluSq/x SINE Alu 3 144 -168 288 0 0 0 chr17 16177578 16177610 -73326943 + (GA)n Simple_repeat Simple_repeat 2 33 0 365 274 82 20 chr17 16178222 16178368 -73326185 + MER103 DNA DNA 10 164 -2 199 236 36 36 chr17 16180096 16180151 -73324402 - L2 LINE L2 -82 3190 3136 583 335 70 17 chr17 16181521 16181924 -73322629 + L2 LINE L2 444 867 -2447 308 350 17 17 chr17 16181933 16182053 -73322500 + L2 LINE L2 1095 1214 -2100 813 256 20 32 chr17 16182057 16182303 -73322250 - MIR SINE MIR 0 262 20 3248 176 15 3 chr17 16182431 16183039 -73321514 - L1PB4 LINE L1 -4 6152 5538 1347 297 137 30 chr17 16183050 16183889 -73320664 + L2 LINE L2 1707 2455 -858 2799 85 6 3 chr17 16183889 16184252 -73320301 + THE1B LTR MaLR 1 364 0 1347 297 137 30 chr17 16184252 16184801 -73319752 + L2 LINE L2 2455 3252 -61 441 202 42 99 chr17 16185024 16185186 -73319367 + MIR SINE MIR 34 190 -63 312 91 0 0 chr17 16185714 16185758 -73318795 + (TC)n Simple_repeat Simple_repeat 1 44 0 382 285 68 68 chr17 16186607 16186828 -73317725 + MIR SINE MIR 23 243 -19 213 333 0 0 chr17 16187318 16187381 -73317172 + (CA)n Simple_repeat Simple_repeat 1 63 0 407 301 72 25 chr17 16187585 16187769 -73316784 + MIR SINE MIR 8 206 -56 2130 257 40 29 chr17 16188285 16188864 -73315689 + MLT1E LTR MaLR 7 591 -2 306 0 0 0 chr17 16189427 16189461 -73315092 + (CA)n Simple_repeat Simple_repeat 2 35 0 197 188 42 21 chr17 16189935 16189983 -73314570 + MIR SINE MIR 99 147 -115 743 224 21 36 chr17 16191655 16191847 -73312706 + MER5A DNA MER1_type 1 189 0 2460 64 0 6 chr17 16192296 16192609 -73311944 - AluY SINE Alu 0 311 1 526 282 163 37 chr17 16192753 16193207 -73311346 + L2 LINE L2 2021 2531 -783 514 289 34 7 chr17 16193303 16193452 -73311101 - MIR SINE MIR -54 208 56 655 289 76 32 chr17 16193478 16194120 -73310433 + L2 LINE L2 2589 3262 -51 187 253 80 27 chr17 16194119 16194194 -73310359 - L2 LINE L2 -35 3237 3159 * 249 234 31 16 chr17 16194237 16194301 -73310252 - L2 LINE L2 -191 3081 3017 755 224 24 30 chr17 16194377 16194542 -73310011 - MER5A DNA MER1_type -23 166 3 2417 59 3 0 chr17 16195011 16195315 -73309238 + AluY SINE Alu 1 305 -6 827 207 30 114 chr17 16195435 16195802 -73308751 + L1ME3A LINE L1 5785 6120 -50 392 273 66 8 chr17 16196916 16197037 -73307516 + MIR SINE MIR 3 130 -132 596 152 25 8 chr17 16197796 16198327 -73306226 + (CA)n Simple_repeat Simple_repeat 1 540 0 305 209 25 0 chr17 16198398 16198561 -73305992 + (CA)n Simple_repeat Simple_repeat 2 168 0 213 213 0 0 chr17 16198892 16198939 -73305614 + G-rich Low_complexity Low_complexity 2 48 0 283 213 98 0 chr17 16199015 16199076 -73305477 - MIR SINE MIR -180 82 16 1366 122 18 140 chr17 16199387 16199716 -73304837 - AluJo SINE Alu -7 305 17 339 232 60 108 chr17 16199979 16200164 -73304389 + MER5B DNA MER1_type 2 177 -1 248 137 20 0 chr17 16200690 16200741 -73303812 + (CA)n Simple_repeat Simple_repeat 2 53 0 317 288 53 30 chr17 16200834 16200966 -73303587 + MER5A DNA MER1_type 16 150 -39 * 693 171 34 0 chr17 16200851 16200968 -73303585 - MER5A DNA MER1_type -21 168 48 514 254 26 69 chr17 16202759 16202948 -73301605 - MIR SINE MIR -34 228 48 1110 242 130 54 chr17 16203519 16204057 -73300496 - L1MC5 LINE L1 -424 7537 6959 301 206 63 0 chr17 16204062 16204125 -73300428 + MLT1J LTR MaLR 445 511 0 248 387 57 8 chr17 16204166 16204290 -73300263 + L2 LINE L2 3141 3270 -2 2130 96 3 0 chr17 16204447 16204740 -73299813 + AluY SINE Alu 1 294 -17 469 229 103 16 chr17 16204762 16204953 -73299600 + L1MC4a LINE L1 5693 5799 -379 409 244 36 54 chr17 16204966 16205134 -73299419 + L1MC5 LINE L1 7771 7935 -26 4195 185 72 15 chr17 16205310 16206126 -73298427 + MER21B LTR ERV1 1 863 0 2095 103 13 0 chr17 16206254 16206554 -73297999 + AluY SINE Alu 1 304 -7 1077 225 7 44 chr17 16206959 16207230 -73297323 - MIR SINE MIR 0 262 2 1505 161 37 22 chr17 16207441 16207765 -73296788 + L1MB8 LINE L1 5850 6178 0 2195 69 0 21 chr17 16207861 16208212 -73296341 + AluY SINE Alu 1 345 0 217 367 10 10 chr17 16209117 16209215 -73295338 - MER5B DNA MER1_type -30 148 51 719 145 26 13 chr17 16209284 16209436 -73295117 - L1MA7 LINE L1 -2 6289 6136 4111 160 55 38 chr17 16209436 16210235 -73294318 + L1MA7 LINE L1 5322 6134 -157 1536 199 32 67 chr17 16210316 16210355 -73294198 + LTR52 LTR ERVL 1 40 -381 1391 203 34 14 chr17 16210355 16210522 -73294031 - AluJo SINE Alu -11 301 124 245 29 29 0 chr17 16210522 16210556 -73293997 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 1391 203 34 14 chr17 16210556 16210683 -73293870 - AluJo SINE Alu -188 124 1 1536 199 32 67 chr17 16210683 16210842 -73293711 + LTR52 LTR ERVL 40 203 -218 2721 13 0 0 chr17 16210842 16211148 -73293405 + AluYb8 SINE Alu 1 306 -12 1536 199 32 67 chr17 16211148 16211159 -73293394 + LTR52 LTR ERVL 203 213 -208 1015 106 0 0 chr17 16211159 16211291 -73293262 + FLAM_C SINE Alu 1 132 -1 1536 199 32 67 chr17 16211291 16211397 -73293156 + LTR52 LTR ERVL 213 302 -119 1559 91 30 35 chr17 16211397 16211628 -73292925 + MER30 DNA MER1_type 1 230 0 1536 199 32 67 chr17 16211628 16211742 -73292811 + LTR52 LTR ERVL 302 418 -3 257 311 29 19 chr17 16212991 16213094 -73291459 + MIR SINE MIR 63 166 -96 527 266 32 83 chr17 16213568 16213724 -73290829 - MIR SINE MIR -6 256 111 2007 96 7 0 chr17 16213724 16214045 -73290508 + AluSx SINE Alu 1 323 0 527 266 32 83 chr17 16214045 16214105 -73290448 - MIR SINE MIR -151 111 50 231 224 17 17 chr17 16214356 16214414 -73290139 - MIR SINE MIR -86 176 119 320 350 10 0 chr17 16215347 16215447 -73289106 + L2 LINE L2 3186 3286 -27 324 236 0 56 chr17 16215815 16215904 -73288649 + L1MC4 LINE L1 6620 6703 -1339 2124 181 61 11 chr17 16216101 16216543 -73288010 + MLT1C LTR MaLR 4 467 0 379 260 31 97 chr17 16216576 16216772 -73287781 - MLT1K LTR MaLR -149 439 257 1875 276 114 22 chr17 16217003 16217902 -73286651 - L2 LINE L2 0 3313 2331 562 169 64 99 chr17 16217903 16218470 -73286083 + LTR48 LTR ERV1 1 518 -24 893 107 0 0 chr17 16218552 16218673 -73285880 - AluSq/x SINE Alu -188 125 5 404 227 93 0 chr17 16218727 16218824 -73285729 - L2 LINE L2 -1096 2218 2113 * 575 226 102 0 chr17 16218821 16218998 -73285555 + L2 LINE L2 2557 2751 -563 1382 226 129 0 chr17 16219002 16219351 -73285202 + L1MB7 LINE L1 5774 6167 -17 3037 129 179 78 chr17 16219351 16219640 -73284913 - MER44D DNA MER2_type -1883 604 346 2077 102 3 3 chr17 16219640 16219933 -73284620 - AluSc SINE Alu 0 309 17 3037 129 179 78 chr17 16219933 16220308 -73284245 - MER44D DNA MER2_type -2141 346 1 854 306 66 39 chr17 16220318 16220874 -73283679 + L2 LINE L2 2734 3300 -13 332 244 8 107 chr17 16220887 16221018 -73283535 + L1ME4a LINE L1 6003 6120 -1 1497 108 0 13 chr17 16221999 16222231 -73282322 - AluY SINE Alu 0 311 83 673 190 0 8 chr17 16222280 16222401 -73282152 - FLAM_C SINE Alu -22 121 2 264 370 110 32 chr17 16222584 16222738 -73281815 + MIR3 SINE MIR 22 187 -21 2337 82 0 0 chr17 16222807 16223112 -73281441 - AluSc SINE Alu -4 305 1 204 349 104 9 chr17 16224091 16224197 -73280356 + MIR SINE MIR 31 146 -62 1402 167 112 65 chr17 16224561 16224944 -73279609 - MER57A LTR ERV1 -2 401 1 301 281 24 0 chr17 16225070 16225152 -73279401 + MIR SINE MIR 72 155 -107 459 52 0 0 chr17 16225222 16225280 -73279273 + (CAT)n Simple_repeat Simple_repeat 1 58 0 506 169 17 59 chr17 16226313 16226431 -73278122 + MLT1A1 LTR MaLR 65 177 -188 380 226 129 0 chr17 16226866 16226959 -73277594 + MLT1A1 LTR MaLR 270 374 0 2203 60 46 0 chr17 16227082 16227366 -73277187 + AluY SINE Alu 15 311 0 985 192 27 49 chr17 16227740 16227964 -73276589 + MER20 DNA MER1_type 1 219 0 1713 191 97 0 chr17 16228691 16229031 -73275522 + MER93b LTR ERV1 1 373 0 414 355 53 12 chr17 16230373 16230542 -73274011 - MIR3 SINE MIR -1 207 32 261 75 0 0 chr17 16230573 16230613 -73273940 + (A)n Simple_repeat Simple_repeat 1 40 0 234 192 0 0 chr17 16230874 16230926 -73273627 + (TA)n Simple_repeat Simple_repeat 1 52 0 24 0 0 0 chr17 16230977 16231001 -73273552 + AT_rich Low_complexity Low_complexity 1 24 0 1078 267 101 33 chr17 16231027 16231424 -73273129 - MLT1J2 LTR MaLR -26 424 1 825 246 56 20 chr17 16231600 16231852 -73272701 - MIR SINE MIR 0 262 2 214 286 200 0 chr17 16232575 16232680 -73271873 + MIR SINE MIR 15 140 -122 2160 106 7 10 chr17 16233073 16233376 -73271177 - AluSg SINE Alu -8 302 1 275 242 106 83 chr17 16233589 16233721 -73270832 - MIR SINE MIR -119 143 9 2142 98 7 3 chr17 16233978 16234275 -73270278 - AluSg SINE Alu -12 298 1 210 240 20 0 chr17 16234481 16234531 -73270022 - L3 LINE CR1 -627 950 900 599 87 47 8 chr17 16235690 16235817 -73268736 + CT-rich Low_complexity Low_complexity 1 132 0 1570 143 17 34 chr17 16236105 16236399 -73268154 + AluJo SINE Alu 1 289 -23 1333 168 111 8 chr17 16237554 16237816 -73266737 - AluJb SINE Alu -19 293 5 358 294 28 9 chr17 16238357 16238466 -73266087 + MIR SINE MIR 2 112 -150 4526 155 72 32 chr17 16238498 16239519 -73265034 + pTR5 LTR ERV1 741 2019 -419 317 245 31 20 chr17 16239525 16239623 -73264930 + LTR30 LTR ERV1 544 642 -80 1595 89 9 0 chr17 16239624 16239838 -73264715 + LTR12 LTR ERV1 480 695 -19 2458 46 0 3 chr17 16240542 16240844 -73263709 + AluY SINE Alu 1 301 -10 515 262 47 0 chr17 16240870 16241019 -73263534 + MIR SINE MIR 105 260 -2 248 226 96 9 chr17 16241951 16242066 -73262487 + Charlie7 DNA MER1_type 2440 2564 -48 844 191 0 0 chr17 16242566 16242702 -73261851 + FRAM SINE Alu 1 136 -40 410 326 73 54 chr17 16242716 16242898 -73261655 + L2 LINE L2 2992 3182 -90 490 229 69 51 chr17 16242898 16243073 -73261480 - MER104 DNA MER2_type -2 178 1 410 326 73 54 chr17 16243073 16243151 -73261402 + L2 LINE L2 3182 3257 -15 1534 120 31 0 chr17 16243263 16243522 -73261031 + L1P4 LINE L1 5281 5547 -619 2217 100 10 0 chr17 16243762 16244062 -73260491 + AluSg SINE Alu 1 303 -7 806 201 19 6 chr17 16244964 16245123 -73259430 - MER5A DNA MER1_type -28 161 1 328 318 3 23 chr17 16245901 16246019 -73258534 + MIR3 SINE MIR 71 188 -20 247 111 0 0 chr17 16247216 16247252 -73257301 - MLT1B LTR MaLR -22 368 333 298 277 104 73 chr17 16248089 16248378 -73256175 + LTR16A1 LTR ERVL 160 457 0 2331 137 65 2 chr17 16248783 16249186 -73255367 + MSTA LTR MaLR 1 428 0 2254 145 13 16 chr17 16249331 16249717 -73254836 - MLT1B LTR MaLR -3 387 3 217 254 0 36 chr17 16250272 16250327 -73254226 + L2 LINE L2 3201 3253 -19 773 298 57 20 chr17 16250374 16250619 -73253934 + MIR SINE MIR 9 262 0 337 392 38 0 chr17 16250628 16250837 -73253716 - MIR SINE MIR -41 221 5 2118 110 0 13 chr17 16250870 16251178 -73253375 + AluSc SINE Alu 1 304 -5 365 217 33 158 chr17 16251576 16251760 -73252793 + MER117 DNA MER1_type 3 163 -34 1630 156 84 39 chr17 16251810 16252169 -73252384 + THE1C LTR MaLR 1 375 0 864 189 6 6 chr17 16252295 16252464 -73252089 + AluJo SINE Alu 121 289 -23 243 0 0 0 chr17 16252467 16252494 -73252059 + (CA)n Simple_repeat Simple_repeat 2 28 0 2147 83 28 0 chr17 16252614 16252904 -73251649 + AluY SINE Alu 1 298 -13 947 316 82 14 chr17 16252962 16253376 -73251177 - L3 LINE CR1 -6 1571 1130 712 329 63 4 chr17 16253383 16253638 -73250915 - L1MEc LINE L1 -6091 305 36 538 280 66 18 chr17 16253662 16254198 -73250355 + L1M4 LINE L1 4027 4649 -1497 2121 101 3 3 chr17 16254208 16254504 -73250049 + AluY SINE Alu 1 296 -15 290 316 11 0 chr17 16254504 16254678 -73249875 + L1M4 LINE L1 4740 4915 -1231 580 295 41 37 chr17 16254733 16255028 -73249525 - MLT1I LTR MaLR -23 386 91 268 290 117 6 chr17 16255130 16255292 -73249261 + L1M4 LINE L1 4962 5141 -1005 383 338 18 5 chr17 16255407 16255629 -73248924 + L1M4 LINE L1 4824 5048 -1098 1061 125 6 0 chr17 16255746 16255906 -73248647 + AluSx SINE Alu 1 161 -151 1968 106 20 3 chr17 16255998 16256290 -73248263 - AluSx SINE Alu -15 297 1 2218 86 13 0 chr17 16256290 16256593 -73247960 - AluSx SINE Alu -5 307 1 2465 47 7 0 chr17 16256599 16256898 -73247655 - AluY SINE Alu -10 301 1 250 297 0 0 chr17 16256985 16257049 -73247504 - L2 LINE L2 -347 2925 2862 414 0 0 0 chr17 16257049 16257095 -73247458 + (TG)n Simple_repeat Simple_repeat 2 47 0 21 0 0 0 chr17 16257235 16257256 -73247297 + AT_rich Low_complexity Low_complexity 1 21 0 356 343 9 0 chr17 16258184 16258289 -73246264 - L2 LINE L2 -11 3302 3197 1842 179 23 20 chr17 16258303 16258650 -73245903 + MLT2C1 LTR ERVL 1 348 -49 201 74 0 0 chr17 16258651 16258678 -73245875 + (TG)n Simple_repeat Simple_repeat 1 27 0 524 280 45 25 chr17 16258795 16258952 -73245601 + MIR SINE MIR 37 196 -66 247 293 101 10 chr17 16258969 16259068 -73245485 - MIR SINE MIR -150 112 5 313 305 23 0 chr17 16259315 16259418 -73245135 + MIR SINE MIR 55 160 -48 1548 130 59 6 chr17 16259915 16260225 -73244328 + LTR54 LTR ERV1 1 376 -134 247 152 152 30 chr17 16260252 16260318 -73244235 + MER57A LTR ERV1 330 403 0 376 216 0 78 chr17 16260524 16260626 -73243927 - MIR SINE MIR -15 247 154 2805 221 26 12 chr17 16260983 16261595 -73242958 - L1M4 LINE L1 -2887 3757 3132 2034 115 31 0 chr17 16261595 16261882 -73242671 - AluSx SINE Alu -15 297 2 2805 221 26 12 chr17 16261882 16261998 -73242555 - L1M4 LINE L1 -3512 3132 3019 226 316 13 0 chr17 16262047 16262126 -73242427 - MIR SINE MIR 0 262 183 2190 113 0 0 chr17 16262156 16262448 -73242105 + AluSx SINE Alu 2 293 -19 4660 225 103 31 chr17 16262482 16262781 -73241772 - L1M4 LINE L1 -3642 3002 2726 2191 102 10 10 chr17 16262781 16263084 -73241469 - AluSx SINE Alu -9 303 1 4660 225 103 31 chr17 16263084 16263744 -73240809 - L1M4 LINE L1 -3918 2726 2115 1750 154 46 4 chr17 16263744 16264024 -73240529 - AluJb SINE Alu -16 296 5 4660 225 103 31 chr17 16264024 16265710 -73238843 - L1M4 LINE L1 -4529 2115 14 1113 251 84 38 chr17 16266052 16266502 -73238051 - MER20B DNA MER1_type -1 782 312 1847 253 49 19 chr17 16266560 16267090 -73237463 - MER90 LTR ERV1 0 614 69 434 269 42 17 chr17 16267121 16267240 -73237313 - MER20B DNA MER1_type -542 241 120 298 200 80 40 chr17 16267242 16267317 -73237236 - MLT1J2 LTR MaLR -306 144 67 243 237 99 84 chr17 16267351 16267482 -73237071 + MIR SINE MIR 75 207 -55 306 0 0 0 chr17 16267564 16267598 -73236955 + (CA)n Simple_repeat Simple_repeat 2 35 0 2230 113 3 0 chr17 16267672 16267972 -73236581 + AluSp SINE Alu 1 301 -12 1410 247 70 15 chr17 16268107 16268511 -73236042 + MLT1G1 LTR MaLR 1 354 -176 435 219 86 0 chr17 16268507 16268612 -73235941 + MLT1G1 LTR MaLR 465 578 -12 * 1043 277 126 52 chr17 16268789 16268896 -73235657 - MLT1J LTR MaLR 0 511 413 2123 123 7 3 chr17 16268896 16269188 -73235365 + AluSq SINE Alu 2 294 -19 1043 277 126 52 chr17 16269188 16269556 -73234997 - MLT1J LTR MaLR -98 413 1 2440 79 0 3 chr17 16271294 16271599 -73232954 + AluY SINE Alu 1 304 -7 301 349 9 28 chr17 16271949 16272058 -73232495 + MIR3 SINE MIR 15 121 -87 839 225 56 11 chr17 16272058 16272236 -73232317 + MER5A DNA MER1_type 4 189 0 2504 37 14 0 chr17 16272311 16272606 -73231947 + AluY SINE Alu 1 299 -12 2271 110 0 0 chr17 16272797 16273096 -73231457 + AluY SINE Alu 1 299 -12 410 156 0 52 chr17 16273747 16273824 -73230729 - L2 LINE L2 -2 3270 3198 1220 184 82 0 chr17 16274279 16274486 -73230067 - MER58A DNA MER1_type 0 224 1 2428 72 3 3 chr17 16275452 16275756 -73228797 - AluY SINE Alu -2 309 6 1156 72 0 0 chr17 16275766 16275905 -73228648 + MER85 DNA T2_type 1 139 0 253 290 172 32 chr17 16276572 16276793 -73227760 + L2 LINE L2 3038 3289 -24 332 280 88 29 chr17 16276801 16277040 -73227513 + HAL1b LINE L1 62 314 -1034 533 248 78 0 chr17 16277095 16277248 -73227305 + HAL1b LINE L1 401 565 -783 379 258 69 73 chr17 16277279 16277512 -73227041 + HAL1b LINE L1 666 897 -451 826 231 152 18 chr17 16278022 16278520 -73226033 + MLT1F LTR MaLR 2 542 0 401 321 179 4 chr17 16280609 16280871 -73223682 - L2 LINE L2 -1 3312 3005 829 185 55 120 chr17 16280891 16281140 -73223413 + Charlie4 DNA MER1_type 1 230 -1731 2306 103 7 0 chr17 16281140 16281450 -73223103 - AluSp SINE Alu -1 312 1 829 185 55 120 chr17 16281450 16281492 -73223061 + Charlie4 DNA MER1_type 230 273 -1688 * 1338 176 125 27 chr17 16281489 16281699 -73222854 + Charlie4a DNA MER1_type 104 292 -1669 1627 140 110 16 chr17 16281699 16282007 -73222546 - MER44D DNA MER2_type -1 608 2 1338 176 125 27 chr17 16282007 16282165 -73222388 + Charlie4a DNA MER1_type 292 508 0 249 326 90 28 chr17 16282256 16282434 -73222119 - L2 LINE L2 -801 2513 2325 1500 154 0 5 chr17 16282458 16282679 -73221874 + AluSg/x SINE Alu 77 296 -16 271 373 51 28 chr17 16282681 16282936 -73221617 - L2 LINE L2 -978 2336 2076 392 313 130 28 chr17 16282995 16283458 -73221095 - L1M4 LINE L1 -2966 3180 2671 2040 71 67 32 chr17 16284108 16284391 -73220162 - AluY SINE Alu -18 293 1 1603 73 60 18 chr17 16284554 16284772 -73219781 - MER30 DNA MER1_type 0 230 4 2392 81 0 7 chr17 16285385 16285683 -73218870 + AluSp SINE Alu 1 296 -17 194 156 22 0 chr17 16285901 16285946 -73218607 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 1185 198 9 22 chr17 16286000 16286222 -73218331 - MER20 DNA MER1_type 0 219 1 27 0 0 0 chr17 16286630 16286657 -73217896 + AT_rich Low_complexity Low_complexity 1 27 0 2557 71 0 0 chr17 16287214 16287522 -73217031 - AluY SINE Alu -3 308 1 1793 150 14 10 chr17 16287531 16287824 -73216729 - L1MB8 LINE L1 0 6178 5885 207 307 21 118 chr17 16288763 16288902 -73215651 + L2 LINE L2 1516 1616 -1698 2236 113 3 0 chr17 16288902 16289202 -73215351 - AluSx SINE Alu -11 301 1 207 307 21 118 chr17 16289202 16289342 -73215211 + L2 LINE L2 1616 1768 -1546 2036 103 31 7 chr17 16289349 16289639 -73214914 - AluY SINE Alu -14 297 1 339 350 92 25 chr17 16289734 16290060 -73214493 + L2 LINE L2 2628 2975 -339 1948 143 0 26 chr17 16290276 16290584 -73213969 - AluSx SINE Alu -12 300 1 356 236 8 134 chr17 16290985 16291112 -73213441 - MER5B DNA MER1_type -1 177 67 335 272 134 18 chr17 16291169 16291362 -73213191 + L2 LINE L2 2644 2866 -406 1506 208 84 45 chr17 16291362 16291789 -73212764 + MLT1D LTR MaLR 1 444 -61 289 274 8 94 chr17 16291833 16291852 -73212701 + L2 LINE L2 2871 2890 -423 1235 175 156 0 chr17 16291852 16292109 -73212444 - AluJo SINE Alu -13 299 3 289 274 8 94 chr17 16292109 16292206 -73212347 + L2 LINE L2 2890 2977 -336 370 237 36 45 chr17 16292234 16292428 -73212125 - L2 LINE L2 -2 3311 2337 1018 230 35 83 chr17 16292469 16292817 -73211736 - L2 LINE L2 -552 2762 2432 2296 271 115 38 chr17 16292818 16293046 -73211507 - L2 LINE L2 -1154 2160 1951 2273 83 3 20 chr17 16293046 16293348 -73211205 - AluSc SINE Alu -12 297 1 2296 271 115 38 chr17 16293348 16293540 -73211013 - L2 LINE L2 -1363 1951 1775 2306 67 37 0 chr17 16293540 16293839 -73210714 - AluY SINE Alu -1 310 1 2296 271 115 38 chr17 16293839 16294302 -73210251 - L2 LINE L2 -1539 1775 1349 2289 85 0 0 chr17 16294302 16294652 -73209901 + AluSq SINE Alu 1 350 0 2296 271 115 38 chr17 16294652 16294713 -73209840 - L2 LINE L2 -1965 1349 1294 3952 96 35 11 chr17 16294713 16295207 -73209346 + MER41A LTR ERV1 1 511 -43 2223 78 14 14 chr17 16295207 16295502 -73209051 - AluSc SINE Alu -14 295 1 3952 96 35 11 chr17 16295502 16295548 -73209005 + MER41A LTR ERV1 511 554 0 2296 271 115 38 chr17 16295548 16295564 -73208989 - L2 LINE L2 -2020 1294 1122 310 265 20 20 chr17 16295766 16295868 -73208685 + L2 LINE L2 3211 3312 -1 435 181 0 0 chr17 16296588 16296704 -73207849 + (CGGGG)n Simple_repeat Simple_repeat 4 119 0 22 56 0 0 chr17 16296886 16296922 -73207631 + AT_rich Low_complexity Low_complexity 1 36 0 212 242 81 0 chr17 16297150 16297212 -73207341 + MIR SINE MIR 106 172 -90 963 131 7 0 chr17 16297731 16297868 -73206685 - AluSq/x SINE Alu -174 138 1 2479 64 0 13 chr17 16299537 16299849 -73204704 - AluY SINE Alu -3 308 1 2386 70 0 3 chr17 16299975 16300273 -73204280 + AluY SINE Alu 1 297 -14 325 257 47 27 chr17 16300388 16300536 -73204017 - L1MC4a LINE L1 -1925 5883 5733 813 171 0 0 chr17 16300570 16300693 -73203860 + FRAM SINE Alu 38 160 -16 394 337 57 50 chr17 16301209 16301488 -73203065 - L2 LINE L2 -5 3267 2987 2324 132 21 13 chr17 16302047 16302425 -73202128 - L1P5 LINE L1 -424 5732 5352 1427 187 99 0 chr17 16302436 16302720 -73201833 - AluJb SINE Alu 0 312 1 910 122 0 0 chr17 16302727 16302850 -73201703 - FLAM_C SINE Alu -10 133 11 562 126 41 84 chr17 16302851 16302992 -73201561 - L1 LINE L1 -780 5366 5232 289 185 19 0 chr17 16303016 16303070 -73201483 - L2 LINE L2 -68 3245 3191 180 111 0 0 chr17 16303103 16303130 -73201423 + (TGGA)n Simple_repeat Simple_repeat 4 30 0 792 237 58 10 chr17 16303552 16303759 -73200794 + L1ME1 LINE L1 4112 4328 -1818 3118 206 76 44 chr17 16303806 16304049 -73200504 + L1ME1 LINE L1 5073 5307 -859 1760 164 20 10 chr17 16304049 16304342 -73200211 + AluJo SINE Alu 1 296 -16 3118 206 76 44 chr17 16304342 16305143 -73199410 + L1ME1 LINE L1 5307 6151 -15 521 272 58 29 chr17 16305190 16305363 -73199190 + MIR SINE MIR 6 183 -79 301 331 206 26 chr17 16305438 16306017 -73198536 - L2 LINE L2 -24 3248 2561 186 317 195 0 chr17 16308322 16308486 -73196067 + L2 LINE L2 1599 1794 -1520 180 164 18 91 chr17 16309387 16309442 -73195111 + L2 LINE L2 3222 3272 0 256 296 20 51 chr17 16310974 16311072 -73193481 - L2 LINE L2 -221 3051 2957 21 0 0 0 chr17 16311986 16312007 -73192546 + AT_rich Low_complexity Low_complexity 1 21 0 427 181 14 0 chr17 16312031 16312103 -73192450 + 7SLRNA srpRNA srpRNA 12 84 -236 243 0 0 0 chr17 16312132 16312159 -73192394 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr17 16312257 16312285 -73192268 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr17 16313479 16313514 -73191039 + AT_rich Low_complexity Low_complexity 1 35 0 284 279 225 0 chr17 16313704 16313833 -73190720 + L2 LINE L2 3115 3272 0 524 219 110 55 chr17 16313845 16314009 -73190544 - MIR SINE MIR -28 234 62 402 293 9 17 chr17 16314099 16314215 -73190338 - MIR SINE MIR -69 139 25 352 103 138 0 chr17 16314748 16314806 -73189747 - MER5A DNA MER1_type -120 69 4 21 82 0 0 chr17 16314997 16315046 -73189507 + AT_rich Low_complexity Low_complexity 1 49 0 509 304 129 32 chr17 16316004 16316502 -73188051 + L2 LINE L2 2652 3205 -67 210 170 71 40 chr17 16316761 16316834 -73187719 + MIR SINE MIR 96 146 -62 975 279 33 42 chr17 16316924 16317382 -73187171 + L1ME4a LINE L1 5486 5939 -182 189 107 0 0 chr17 16317945 16317973 -73186580 + (T)n Simple_repeat Simple_repeat 1 28 0 8648 100 21 25 chr17 16318276 16319581 -73184972 - HSMAR2 DNA Mariner -1 1301 1 233 271 258 19 chr17 16321459 16321614 -73182939 - MIR SINE MIR -63 199 8 551 297 83 18 chr17 16323021 16323250 -73181303 + MIR SINE MIR 2 245 -17 2054 106 7 0 chr17 16324280 16324573 -73179980 - AluSx SINE Alu -17 295 1 252 0 0 0 chr17 16324678 16324706 -73179847 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 216 0 0 0 chr17 16325281 16325305 -73179248 + (T)n Simple_repeat Simple_repeat 1 24 0 2169 89 0 3 chr17 16325808 16326101 -73178452 + AluSg1 SINE Alu 1 292 -17 2013 136 0 0 chr17 16326613 16326914 -73177639 - AluSq SINE Alu -12 301 1 2318 81 3 0 chr17 16327176 16327473 -73177080 + AluY SINE Alu 1 298 -13 2202 107 0 0 chr17 16328045 16328354 -73176199 + AluSc SINE Alu 1 309 0 1637 101 8 36 chr17 16328923 16329171 -73175382 - AluSq SINE Alu -72 241 1 2121 98 0 23 chr17 16330332 16330639 -73173914 + AluSc SINE Alu 2 301 -8 820 210 6 12 chr17 16330836 16330998 -73173555 - MIR SINE MIR -95 167 7 184 309 88 0 chr17 16331077 16331145 -73173408 + MIR SINE MIR 166 239 -23 238 338 0 0 chr17 16331280 16331348 -73173205 + L2 LINE L2 3205 3272 0 303 150 0 0 chr17 16331349 16331409 -73173144 + (TGGA)n Simple_repeat Simple_repeat 3 62 0 611 229 37 107 chr17 16331756 16331880 -73172673 + MIR SINE MIR 34 165 -97 2172 115 0 0 chr17 16331880 16332176 -73172377 + AluSc SINE Alu 1 296 -13 611 229 37 107 chr17 16332176 16332223 -73172330 + MIR SINE MIR 165 186 -76 1171 184 14 5 chr17 16332223 16332440 -73172113 + MER20 DNA MER1_type 1 219 0 611 229 37 107 chr17 16332440 16332511 -73172042 + MIR SINE MIR 186 260 -2 195 175 113 50 chr17 16332638 16332718 -73171835 + L3 LINE CR1 382 466 -1111 721 232 16 54 chr17 16332768 16332920 -73171633 + MIR SINE MIR 8 153 -109 2462 50 0 0 chr17 16332920 16333217 -73171336 + AluY SINE Alu 1 297 -14 721 232 16 54 chr17 16333217 16333249 -73171304 + MIR SINE MIR 153 185 -77 961 281 100 75 chr17 16333498 16333753 -73170800 + L1ME4a LINE L1 3947 4194 -1952 2201 86 3 13 chr17 16333753 16334056 -73170497 + AluSc SINE Alu 1 300 -9 961 281 100 75 chr17 16334056 16334113 -73170440 + L1ME4a LINE L1 4194 4248 -1898 2503 61 0 0 chr17 16334113 16334424 -73170129 + AluY SINE Alu 1 311 0 961 281 100 75 chr17 16334424 16334816 -73169737 + L1ME4a LINE L1 4248 4629 -1517 2361 73 0 0 chr17 16334816 16335118 -73169435 + AluY SINE Alu 1 302 -9 961 281 100 75 chr17 16335118 16335510 -73169043 + L1ME4a LINE L1 4629 5072 -1074 2503 23 7 3 chr17 16335610 16335911 -73168642 - AluY SINE Alu -8 303 2 1765 85 101 4 chr17 16335911 16336169 -73168384 - AluSp SINE Alu -30 283 1 935 196 20 20 chr17 16336238 16336437 -73168116 + MLT2D LTR ERVL 216 414 0 1079 296 68 43 chr17 16336437 16336776 -73167777 + L1ME4a LINE L1 5380 5740 -430 2107 91 0 26 chr17 16336776 16337083 -73167470 + AluY SINE Alu 1 299 -12 1079 296 68 43 chr17 16337083 16337301 -73167252 + L1ME4a LINE L1 5740 5951 -219 2311 55 0 10 chr17 16337531 16337822 -73166731 - AluY SINE Alu -23 288 1 273 284 0 0 chr17 16338664 16338731 -73165822 + MER103 DNA DNA 98 164 -2 278 217 17 0 chr17 16338993 16339053 -73165500 + MER94 DNA DNA 2 62 -72 809 204 0 0 chr17 16339053 16339210 -73165343 - FRAM SINE Alu -16 160 4 1174 177 5 9 chr17 16339302 16339522 -73165031 + AluSg/x SINE Alu 74 292 -20 349 284 52 43 chr17 16339573 16339689 -73164864 - L1MC4 LINE L1 -1340 6702 6586 318 310 46 23 chr17 16340101 16340275 -73164278 + L1ME4a LINE L1 5944 6121 0 2301 81 0 3 chr17 16341148 16341445 -73163108 - AluSc SINE Alu -13 296 1 2094 114 0 0 chr17 16341449 16341739 -73162814 - AluSq SINE Alu -23 290 1 211 313 9 98 chr17 16341777 16341889 -73162664 - MIR SINE MIR -60 148 90 184 183 0 42 chr17 16341921 16341992 -73162561 + CT-rich Low_complexity Low_complexity 4 71 0 361 307 58 6 chr17 16342497 16342662 -73161891 + MIR SINE MIR 32 208 -54 2237 104 0 13 chr17 16342831 16343147 -73161406 - AluSx SINE Alu 0 312 1 3619 106 66 2 chr17 16343166 16343711 -73160842 - LTR19B LTR ERV1 0 580 1 300 130 8 4 chr17 16343906 16343960 -73160593 + MIR SINE MIR 103 158 -50 2290 86 3 0 chr17 16344004 16344307 -73160246 - AluY SINE Alu -7 304 1 720 241 37 87 chr17 16344310 16344609 -73159944 + MER102a DNA MER1_type 33 316 -14 2257 56 0 33 chr17 16345211 16345515 -73159038 + AluY SINE Alu 1 294 -17 191 88 29 0 chr17 16345813 16345847 -73158706 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2350 44 0 20 chr17 16347183 16347479 -73157074 - AluY SINE Alu -21 290 1 402 258 11 86 chr17 16347559 16347745 -73156808 + L1MC5 LINE L1 7742 7913 -48 191 293 93 27 chr17 16348087 16348213 -73156340 + MIR SINE MIR 23 256 -6 2187 68 37 3 chr17 16348303 16348598 -73155955 - AluY SINE Alu -6 305 1 2027 120 16 0 chr17 16349147 16349455 -73155098 - AluSq SINE Alu 0 313 1 2299 72 0 25 chr17 16349508 16349826 -73154727 + AluY SINE Alu 1 310 -1 248 311 25 34 chr17 16350022 16350141 -73154412 + MIR3 SINE MIR 83 200 -8 2236 167 38 40 chr17 16350456 16350882 -73153671 + MSTB1 LTR MaLR 1 425 -7 671 199 58 89 chr17 16350958 16351033 -73153520 + MER5A DNA MER1_type 3 79 -110 2089 85 17 10 chr17 16351033 16351326 -73153227 + AluSg SINE Alu 1 295 -15 671 199 58 89 chr17 16351326 16351441 -73153112 + MER5A DNA MER1_type 79 187 -2 383 228 0 148 chr17 16353179 16353328 -73151225 + MIR SINE MIR 48 174 -88 2181 104 3 0 chr17 16353859 16354166 -73150387 - AluSx SINE Alu -4 308 1 2325 44 10 17 chr17 16354572 16354870 -73149683 + AluY SINE Alu 1 296 -15 266 341 72 30 chr17 16355383 16355550 -73149003 + MIR SINE MIR 20 193 -69 2440 53 0 3 chr17 16355685 16355987 -73148566 + AluY SINE Alu 1 301 -10 1982 94 4 7 chr17 16357385 16357660 -73146893 - AluSg SINE Alu -19 291 18 403 70 0 0 chr17 16357660 16357707 -73146846 - Alu SINE Alu -251 50 1 776 128 8 0 chr17 16357965 16358082 -73146471 - MSTB1 LTR MaLR 0 432 315 756 164 8 8 chr17 16358071 16358199 -73146354 - MSTB1 LTR MaLR -297 129 2 * 939 307 111 51 chr17 16358199 16358465 -73146088 + L3 LINE CR1 156 404 -1173 1941 118 31 0 chr17 16358465 16358753 -73145800 - AluSx SINE Alu -15 297 1 939 307 111 51 chr17 16358753 16358978 -73145575 + L3 LINE CR1 404 694 -883 2386 58 0 0 chr17 16358978 16359270 -73145283 + AluY SINE Alu 1 292 -19 939 307 111 51 chr17 16359270 16359389 -73145164 + L3 LINE CR1 694 804 -773 290 293 155 60 chr17 16359665 16360000 -73144553 + L3 LINE CR1 1128 1494 -83 2310 57 0 0 chr17 16360084 16360398 -73144155 + AluY SINE Alu 1 314 0 744 277 41 67 chr17 16360404 16360436 -73144117 + MIR SINE MIR 2 33 -229 2702 13 0 0 chr17 16360436 16360740 -73143813 + AluY SINE Alu 1 304 -7 744 277 41 67 chr17 16360740 16360974 -73143579 + MIR SINE MIR 33 261 -1 2262 77 0 3 chr17 16361113 16361411 -73143142 + AluSg SINE Alu 1 297 -13 225 108 0 0 chr17 16362448 16362485 -73142068 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 471 318 131 32 chr17 16362645 16363412 -73141141 + L2 LINE L2 2371 3207 -106 1315 155 34 60 chr17 16363542 16363807 -73140746 + AluJb SINE Alu 31 288 -24 794 196 110 0 chr17 16363838 16364001 -73140552 + Tigger2 DNA MER2_type 2528 2708 -10 1449 232 41 6 chr17 16364105 16364446 -73140107 + L1MD3 LINE L1 7633 7985 -10 2109 92 48 0 chr17 16365092 16365385 -73139168 + AluSx SINE Alu 1 307 -5 2150 100 0 7 chr17 16366526 16366825 -73137728 - AluSg SINE Alu -13 297 1 2201 71 0 30 chr17 16366898 16367033 -73137520 + AluSg1 SINE Alu 1 139 -170 2291 77 0 3 chr17 16367033 16367331 -73137222 + AluY SINE Alu 1 297 -14 2369 76 0 3 chr17 16367333 16367647 -73136906 + AluSp SINE Alu 1 313 0 2201 71 0 30 chr17 16367647 16367805 -73136748 + AluSg1 SINE Alu 140 288 -21 247 225 180 0 chr17 16368017 16368128 -73136425 + L1ME4a LINE L1 5990 6120 -1 281 311 11 11 chr17 16368165 16368255 -73136298 - MIR3 SINE MIR -15 193 104 261 332 56 25 chr17 16368634 16368854 -73135699 + L2 LINE L2 2827 3059 -213 279 236 0 42 chr17 16369451 16369523 -73135030 + L3 LINE CR1 1504 1572 -5 6610 66 29 50 chr17 16370018 16371257 -73133296 + SVA Other Other 432 1386 0 1984 71 8 0 chr17 16371276 16371529 -73133024 + AluY SINE Alu 1 255 -56 189 107 0 0 chr17 16371686 16371714 -73132839 + (GGGA)n Simple_repeat Simple_repeat 2 29 0 1532 174 28 0 chr17 16372031 16372313 -73132240 - AluJb SINE Alu -4 308 19 679 239 234 0 chr17 16372949 16373158 -73131395 - MIR SINE MIR -3 259 2 203 88 29 0 chr17 16374733 16374767 -73129786 + (TGGA)n Simple_repeat Simple_repeat 2 36 0 2018 141 0 3 chr17 16374832 16375129 -73129424 - AluSx SINE Alu -16 296 1 3240 118 45 19 chr17 16376095 16376692 -73127861 + MER4B LTR ERV1 1 779 0 511 222 189 0 chr17 16376884 16377037 -73127516 - MER21B LTR ERV1 -1 862 681 * 1793 190 18 70 chr17 16377031 16377169 -73127384 - MER21B LTR ERV1 -423 440 296 2107 109 0 13 chr17 16377169 16377472 -73127081 - AluSx SINE Alu -10 302 4 1793 190 18 70 chr17 16377472 16377775 -73126778 - MER21B LTR ERV1 -567 296 22 2128 116 0 0 chr17 16377780 16378099 -73126454 - AluSg SINE Alu 0 319 1 390 279 19 62 chr17 16378115 16378276 -73126277 + MIR SINE MIR 102 255 -7 180 111 0 0 chr17 16378545 16378572 -73125981 + (A)n Simple_repeat Simple_repeat 1 27 0 195 302 83 52 chr17 16379466 16379562 -73124991 + MIR SINE MIR 37 135 -127 2236 79 7 23 chr17 16379952 16380257 -73124296 - AluSx SINE Alu -12 300 1 321 26 0 0 chr17 16380799 16380837 -73123716 + (CA)n Simple_repeat Simple_repeat 1 38 0 2266 52 0 7 chr17 16380929 16381263 -73123290 + AluY SINE Alu 1 311 0 2053 95 3 0 chr17 16382288 16382571 -73121982 - AluY SINE Alu -27 284 1 207 190 17 35 chr17 16383820 16383878 -73120675 + (CAGAGA)n Simple_repeat Simple_repeat 3 59 0 2190 79 6 41 chr17 16385122 16385438 -73119115 - AluSg SINE Alu -1 309 5 2154 98 10 0 chr17 16385441 16385746 -73118807 - AluSx SINE Alu -4 308 1 195 237 102 0 chr17 16385850 16385909 -73118644 - L3 LINE CR1 -936 641 577 2304 153 31 26 chr17 16385947 16386364 -73118189 + MSTB1 LTR MaLR 1 419 -13 2038 141 91 16 chr17 16386381 16386744 -73117809 - MLT1B LTR MaLR 0 390 1 3451 80 19 14 chr17 16387421 16387906 -73116647 + LTR15 LTR ERV1 1 487 -6 2380 55 0 0 chr17 16388565 16388855 -73115698 - AluY SINE Alu -17 294 5 379 306 105 15 chr17 16389349 16389692 -73114861 + L2 LINE L2 309 682 -2632 1611 155 7 58 chr17 16389741 16390051 -73114502 - AluJb SINE Alu -18 294 1 266 171 0 0 chr17 16390178 16390219 -73114334 - FAM SINE Alu -13 166 126 1023 181 0 0 chr17 16390220 16390386 -73114167 - FRAM SINE Alu 0 166 1 2019 136 12 6 chr17 16390387 16390710 -73113843 - L1MB3 LINE L1 -41 6142 5818 2557 52 0 0 chr17 16393602 16393911 -73110642 + AluY SINE Alu 1 309 -2 397 250 78 23 chr17 16394057 16394185 -73110368 + MIR SINE MIR 32 166 -96 305 359 0 0 chr17 16395732 16395824 -73108729 - MIR SINE MIR -122 140 49 183 294 64 55 chr17 16396265 16396374 -73108179 - L2 LINE L2 -1 3312 3203 410 313 123 6 chr17 16396456 16396635 -73107918 + MLT1L LTR MaLR 363 562 -53 593 114 0 0 chr17 16397409 16397488 -73107065 + AluS SINE Alu 5 83 -229 2177 103 10 0 chr17 16397738 16398039 -73106514 + AluSx SINE Alu 1 304 -8 2164 104 10 0 chr17 16398216 16398524 -73106029 + AluY SINE Alu 1 311 0 1177 324 77 26 chr17 16398571 16399222 -73105331 + L2 LINE L2 2019 2702 -612 811 178 0 0 chr17 16399234 16399363 -73105190 - FLAM_C SINE Alu 0 133 5 378 259 24 41 chr17 16399378 16399398 -73105155 - L1MA10 LINE L1 -2 6332 6313 1841 221 14 18 chr17 16399398 16399838 -73104715 - L1ME2 LINE L1 -9 6155 5718 369 248 41 25 chr17 16399838 16399959 -73104594 - L1MEc LINE L1 -3846 2369 2247 1801 215 87 34 chr17 16400081 16400528 -73104025 + Charlie1a DNA MER1_type 1 471 -984 712 150 39 20 chr17 16400770 16400923 -73103630 - L1MC3 LINE L1 -97 7688 7533 977 292 23 9 chr17 16401046 16401388 -73103165 - L1MEc LINE L1 -6014 382 36 475 306 126 22 chr17 16401403 16401625 -73102928 + L2 LINE L2 2702 2946 -368 233 231 50 88 chr17 16401888 16402048 -73102505 + L1MC4a LINE L1 5254 5407 -927 32 0 0 0 chr17 16402053 16402085 -73102468 + AT_rich Low_complexity Low_complexity 1 32 0 284 203 159 0 chr17 16402088 16402157 -73102396 + L1MC4a LINE L1 5482 5561 -560 345 295 185 7 chr17 16402158 16402439 -73102114 + L1MC4a LINE L1 5585 5915 -1893 1225 165 9 5 chr17 16402763 16402975 -73101578 - MER20 DNA MER1_type -5 214 2 279 360 40 0 chr17 16403536 16403636 -73100917 + MIR3 SINE MIR 94 197 -11 1508 172 18 14 chr17 16405438 16405738 -73098815 + AluJo SINE Alu 2 302 0 2340 72 0 0 chr17 16407075 16407366 -73097187 + AluSc SINE Alu 1 291 -18 641 224 116 88 chr17 16407427 16407780 -73096773 + LTR52 LTR ERVL 1 363 -58 310 351 63 0 chr17 16408744 16408855 -73095698 - L1MC4 LINE L1 -1339 6703 6586 612 281 59 95 chr17 16408890 16409079 -73095474 + L2 LINE L2 2138 2332 -982 937 156 177 0 chr17 16409079 16409265 -73095288 - MER20 DNA MER1_type 0 219 1 612 281 59 95 chr17 16409265 16409410 -73095143 + L2 LINE L2 2332 2455 -859 2429 68 0 3 chr17 16409410 16409720 -73094833 - AluY SINE Alu -2 309 1 612 281 59 95 chr17 16409720 16409825 -73094728 + L2 LINE L2 2455 2562 -752 2366 70 0 7 chr17 16410921 16411222 -73093331 + AluY SINE Alu 1 299 -12 1037 233 137 32 chr17 16411337 16411710 -73092843 + MLT1J1 LTR MaLR 15 426 -20 1991 100 20 23 chr17 16411864 16412164 -73092389 - AluSx SINE Alu -13 299 1 2662 45 0 0 chr17 16412641 16412949 -73091604 + AluY SINE Alu 1 308 -3 225 286 29 14 chr17 16414229 16414299 -73090254 - MIR3 SINE MIR -17 191 121 342 193 80 23 chr17 16414472 16414560 -73089993 + L2 LINE L2 3180 3272 0 508 261 182 20 chr17 16414942 16415145 -73089408 + MIR SINE MIR 22 257 -5 242 296 141 3 chr17 16416417 16416544 -73088009 + MIR3 SINE MIR 4 144 -78 405 247 69 23 chr17 16416563 16416737 -73087816 - MIR SINE MIR 0 262 81 283 216 62 21 chr17 16417291 16417388 -73087165 + AluYb8 SINE Alu 208 308 0 2247 77 7 14 chr17 16417427 16417724 -73086829 - AluSx SINE Alu -17 295 1 5359 232 36 28 chr17 16417724 16417964 -73086589 - L1M2c LINE L1 -4824 1965 1728 2340 67 0 54 chr17 16417964 16418278 -73086275 - AluY SINE Alu -14 297 1 5359 232 36 28 chr17 16418278 16418383 -73086170 - L1M2c LINE L1 -5061 1728 1625 559 13 26 13 chr17 16418383 16418459 -73086094 + (TTTC)n Simple_repeat Simple_repeat 2 78 0 1874 125 18 14 chr17 16418460 16418739 -73085814 - AluSx SINE Alu -32 280 1 5359 232 36 28 chr17 16418739 16418931 -73085622 - L1M2c LINE L1 -5164 1625 1436 2119 124 0 0 chr17 16418931 16419221 -73085332 + AluSg SINE Alu 1 290 -20 5359 232 36 28 chr17 16419221 16420934 -73083619 - L1M2c LINE L1 -5353 1436 14 775 309 121 62 chr17 16421001 16421157 -73083396 - L1MDa LINE L1 -2196 4344 4199 2320 102 7 0 chr17 16421157 16421461 -73083092 + AluSx SINE Alu 1 306 -6 775 309 121 62 chr17 16421461 16421472 -73083081 - L1MDa LINE L1 -2341 4199 4190 2239 94 0 29 chr17 16421472 16421779 -73082774 + AluY SINE Alu 1 298 -13 2042 52 135 0 chr17 16421781 16422048 -73082505 + AluY SINE Alu 1 303 -8 775 309 121 62 chr17 16422048 16422591 -73081962 - L1MDa LINE L1 -2350 4190 3540 2189 114 0 0 chr17 16422591 16422872 -73081681 - AluSx SINE Alu -31 281 1 775 309 121 62 chr17 16422872 16423256 -73081297 - L1MDa LINE L1 -3000 3540 3180 1147 181 48 48 chr17 16423262 16423522 -73081031 + MER33 DNA MER1_type 1 263 -2322 2541 50 0 3 chr17 16423522 16423824 -73080729 + AluY SINE Alu 1 301 -10 1147 181 48 48 chr17 16423824 16423873 -73080680 + MER33 DNA MER1_type 262 310 -14 273 290 43 38 chr17 16423930 16424154 -73080399 - L1MDa LINE L1 -3404 3136 2911 3465 219 74 56 chr17 16424206 16426126 -73078427 + L1MDb LINE L1 16 2004 -4402 2365 98 0 0 chr17 16426169 16426464 -73078089 - AluSg SINE Alu -15 295 1 23 0 0 0 chr17 16426464 16426487 -73078066 + AT_rich Low_complexity Low_complexity 1 23 0 2425 87 0 0 chr17 16426630 16426930 -73077623 - AluSc SINE Alu -9 300 1 321 239 68 68 chr17 16426941 16427104 -73077449 - L1MDa LINE L1 -3937 2603 2441 2206 115 10 0 chr17 16427141 16427445 -73077108 - AluSx SINE Alu -5 307 1 2542 84 0 0 chr17 16427618 16427929 -73076624 - AluSx SINE Alu -1 311 1 2068 109 0 82 chr17 16427929 16428106 -73076447 - AluSx SINE Alu -16 296 154 2200 119 13 13 chr17 16428106 16428418 -73076135 - AluSx SINE Alu 0 312 1 2068 109 0 82 chr17 16428418 16428561 -73075992 - AluSx SINE Alu -158 154 1 4271 134 54 0 chr17 16428562 16429226 -73075327 + L1MA4A LINE L1 5594 6293 -10 190 304 0 0 chr17 16429269 16429325 -73075228 - L2 LINE L2 0 3313 3258 2555 56 3 0 chr17 16430033 16430335 -73074218 - AluY SINE Alu -8 303 1 356 313 154 5 chr17 16430491 16430699 -73073854 - HAL1 LINE L1 -1013 1494 1256 1389 240 105 12 chr17 16431163 16431649 -73072904 - MLT1E LTR MaLR -3 590 21 519 338 84 26 chr17 16431695 16432038 -73072515 - L2 LINE L2 -561 2753 2391 260 264 83 58 chr17 16433721 16433842 -73070711 - MER5A DNA MER1_type -22 167 44 2085 131 3 0 chr17 16434826 16435124 -73069429 + AluY SINE Alu 1 299 -12 2258 101 13 0 chr17 16435218 16435516 -73069037 + AluSx SINE Alu 1 302 -10 537 299 118 88 chr17 16435722 16436247 -73068306 - MLT1K LTR MaLR -2 586 46 28 0 0 0 chr17 16437037 16437065 -73067488 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr17 16437890 16437923 -73066630 + GC_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr17 16437940 16437962 -73066591 + GC_rich Low_complexity Low_complexity 1 22 0 611 233 55 25 chr17 16438125 16438327 -73066226 - L1MC4a LINE L1 -2 7806 7599 337 277 153 36 chr17 16438330 16438604 -73065949 - L1M4 LINE L1 -2997 3149 2844 314 339 62 0 chr17 16438871 16439001 -73065552 - HAL1b LINE L1 -620 728 591 256 136 51 51 chr17 16439671 16439730 -73064823 - MLT1K LTR MaLR -8 580 522 603 270 176 30 chr17 16439800 16440033 -73064520 - MLT1K LTR MaLR -176 412 146 2440 56 20 7 chr17 16440144 16440446 -73064107 + AluY SINE Alu 1 306 -5 901 133 0 22 chr17 16440855 16440990 -73063563 + FLAM_C SINE Alu 2 133 0 25 0 0 0 chr17 16440993 16441018 -73063535 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr17 16441325 16441349 -73063204 + AT_rich Low_complexity Low_complexity 1 24 0 2281 261 52 3 chr17 16441490 16442138 -73062415 - L1ME3A LINE L1 -51 6119 5440 2333 108 0 6 chr17 16442193 16442507 -73062046 + AluSx SINE Alu 1 312 0 349 247 55 55 chr17 16442653 16442799 -73061754 - L1ME3A LINE L1 -271 5899 5754 485 237 78 63 chr17 16442855 16443232 -73061321 - L1ME3A LINE L1 -517 5653 5189 362 342 107 4 chr17 16443374 16443599 -73060954 - L1ME3A LINE L1 -1158 4988 4741 2239 88 7 7 chr17 16443903 16444197 -73060356 - AluSg SINE Alu -16 294 1 360 287 33 16 chr17 16444451 16444571 -73059982 - MER102b DNA MER1_type -2 339 218 683 255 60 0 chr17 16444571 16444755 -73059798 - MER58A DNA MER1_type 0 224 30 2422 74 0 3 chr17 16444859 16445156 -73059397 - AluY SINE Alu -14 297 2 635 339 125 34 chr17 16445272 16445926 -73058627 + L2 LINE L2 2165 2878 -436 4913 201 91 26 chr17 16445929 16446094 -73058459 - Charlie1 DNA MER1_type -1 2760 2607 829 180 0 0 chr17 16446094 16446222 -73058331 + FLAM_C SINE Alu 1 128 -5 4913 201 91 26 chr17 16446222 16447400 -73057153 - Charlie1 DNA MER1_type -154 2607 5 636 257 33 71 chr17 16447452 16447662 -73056891 - MIR SINE MIR -5 257 56 288 254 15 0 chr17 16447716 16447783 -73056770 + L2 LINE L2 3237 3304 -9 893 294 43 29 chr17 16448119 16448534 -73056019 - L1MC4a LINE L1 -1741 6067 5647 2429 82 0 7 chr17 16450916 16451219 -73053334 - AluY SINE Alu -9 302 2 2382 158 80 5 chr17 16451720 16452118 -73052435 - MSTA LTR MaLR 0 428 1 216 97 0 0 chr17 16452124 16452155 -73052398 + (A)n Simple_repeat Simple_repeat 1 31 0 643 279 6 36 chr17 16452214 16452379 -73052174 + MER58A DNA MER1_type 1 160 0 1698 169 55 23 chr17 16452392 16452699 -73051854 - MLT1A1 LTR MaLR -30 335 19 377 194 0 14 chr17 16452708 16452780 -73051773 + MER58A DNA MER1_type 154 224 0 475 261 124 56 chr17 16453008 16453227 -73051326 + MIR SINE MIR 10 236 -26 2376 89 3 0 chr17 16454101 16454403 -73050150 + AluSp SINE Alu 1 303 -10 2125 77 70 0 chr17 16454623 16454895 -73049658 + AluSc SINE Alu 1 291 -18 610 298 80 46 chr17 16455336 16455685 -73048868 - MLT1K LTR MaLR -153 435 75 2427 66 3 7 chr17 16455858 16456159 -73048394 + AluY SINE Alu 5 304 -7 2572 63 0 0 chr17 16456561 16456864 -73047689 - AluY SINE Alu -8 303 1 339 238 24 24 chr17 16456880 16456964 -73047589 - MLT1K LTR MaLR -92 496 413 459 0 0 0 chr17 16457400 16457451 -73047102 + (TA)n Simple_repeat Simple_repeat 2 52 0 23 68 0 0 chr17 16457607 16457651 -73046902 + AT_rich Low_complexity Low_complexity 1 44 0 3166 176 16 13 chr17 16457904 16458460 -73046093 - MER68 LTR ERV1 -4 558 1 4177 243 66 24 chr17 16458656 16459946 -73044607 + L1MC4 LINE L1 6694 8037 -5 2108 100 0 0 chr17 16460110 16460423 -73044130 - AluY SINE Alu 0 313 1 2020 65 34 74 chr17 16460450 16460773 -73043780 - AluY SINE Alu -1 310 1 1198 79 12 12 chr17 16460943 16461108 -73043445 - AluSp SINE Alu -7 306 142 1973 114 0 14 chr17 16461108 16461389 -73043164 - AluSq SINE Alu -36 277 1 252 292 75 19 chr17 16461438 16461599 -73042954 + L1ME3A LINE L1 5404 5573 -589 1041 122 47 122 chr17 16461605 16461647 -73042906 - L1MA8 LINE L1 -7 6284 6240 186 43 0 0 chr17 16461647 16461670 -73042883 + (CA)n Simple_repeat Simple_repeat 2 24 0 1041 122 47 122 chr17 16461670 16461905 -73042648 - L1MA8 LINE L1 -51 6240 6028 1296 260 62 62 chr17 16461924 16462149 -73042404 + L1ME3A LINE L1 5600 5824 -346 2386 80 0 7 chr17 16462149 16462450 -73042103 + AluY SINE Alu 1 299 -12 1296 260 62 62 chr17 16462450 16462785 -73041768 + L1ME3A LINE L1 5823 6160 -10 614 233 90 23 chr17 16463373 16463659 -73040894 - MLT2F LTR ERVL -86 577 202 248 0 31 0 chr17 16463659 16463691 -73040862 + (TG)n Simple_repeat Simple_repeat 1 33 0 228 225 0 38 chr17 16464584 16464664 -73039889 - HSAT5 Satellite Satellite -7 79 3 214 329 14 0 chr17 16465071 16465141 -73039412 + (CACG)n Simple_repeat Simple_repeat 2 72 0 250 145 16 65 chr17 16465441 16465503 -73039050 - SN5 Other centromeric -77 378 320 292 195 0 23 chr17 16465952 16466039 -73038514 - HSAT5 Satellite Satellite -1 85 1 314 230 0 29 chr17 16466070 16466171 -73038382 - HSAT5 Satellite Satellite -1 98 1 271 165 10 134 chr17 16466933 16467030 -73037523 - SN5 Other centromeric -77 378 294 1124 325 35 18 chr17 16472165 16472832 -73031721 + L1MC3 LINE L1 5479 6156 -1629 192 158 0 0 chr17 16476592 16476630 -73027923 + CT-rich Low_complexity Low_complexity 2 39 0 2242 83 10 3 chr17 16476666 16476954 -73027599 + AluY SINE Alu 5 294 -17 3399 162 17 3 chr17 16478586 16479248 -73025305 - L1 LINE L1 -1306 4840 4170 607 183 65 188 chr17 16479248 16479434 -73025119 - MLT1E2 LTR MaLR -160 494 284 350 220 63 74 chr17 16479593 16479775 -73024778 - MLT1-int LTR MaLR -51 1684 1140 2924 104 64 115 chr17 16479784 16480409 -73024144 - LTR14B LTR ERVK 0 608 16 2019 100 79 0 chr17 16480480 16480760 -73023793 + AluSp SINE Alu 1 302 -11 345 47 0 0 chr17 16480760 16480803 -73023750 + (TA)n Simple_repeat Simple_repeat 2 44 0 477 118 97 0 chr17 16481596 16481689 -73022864 - AluSp/q SINE Alu 0 313 212 244 60 113 151 chr17 16482896 16483081 -73021472 + (CTGGGG)n Simple_repeat Simple_repeat 1 178 0 28 0 0 0 chr17 16484180 16484208 -73020345 + AT_rich Low_complexity Low_complexity 1 28 0 806 212 20 6 chr17 16484307 16484609 -73019944 - MLT1A2 LTR MaLR 0 374 1 609 184 83 30 chr17 16485143 16485311 -73019242 + MER3 DNA MER1_type 19 195 -14 2280 109 23 0 chr17 16485507 16485809 -73018744 + AluSg SINE Alu 1 309 -1 1153 92 7 0 chr17 16485893 16486045 -73018508 - AluSg/x SINE Alu -1 311 159 1683 198 0 3 chr17 16486126 16486424 -73018129 - AluJb SINE Alu -15 297 1 22 70 0 0 chr17 16486667 16486710 -73017843 + AT_rich Low_complexity Low_complexity 1 43 0 2273 101 7 0 chr17 16486716 16487012 -73017541 - AluSx SINE Alu -14 298 1 333 47 0 0 chr17 16487281 16487324 -73017229 + (CA)n Simple_repeat Simple_repeat 2 44 0 1164 127 0 0 chr17 16488041 16488199 -73016354 + AluSp SINE Alu 138 295 -18 218 56 28 0 chr17 16488857 16488893 -73015660 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1580 95 5 9 chr17 16489122 16489333 -73015220 - AluSq SINE Alu -17 296 87 345 305 130 25 chr17 16489699 16489899 -73014654 - MER69 DNA AcHobo -1989 537 317 400 285 28 39 chr17 16489934 16490113 -73014440 - MER69 DNA AcHobo -1019 207 31 197 286 95 0 chr17 16490825 16490888 -73013665 + L2 LINE L2 3148 3216 -56 293 250 143 0 chr17 16491000 16491084 -73013469 - MIR SINE MIR -117 145 50 320 228 39 47 chr17 16491686 16491707 -73012846 + L1MC4 LINE L1 7913 7933 -109 2065 157 0 7 chr17 16491707 16492013 -73012540 + AluSx SINE Alu 1 304 -8 320 228 39 47 chr17 16492013 16492118 -73012435 + L1MC4 LINE L1 7933 8038 -4 454 311 83 53 chr17 16492284 16492622 -73011931 - L1ME4a LINE L1 -224 5897 5550 1625 131 4 0 chr17 16492666 16492895 -73011658 + AluSq SINE Alu 68 297 -16 689 272 105 19 chr17 16492967 16493338 -73011215 - L1ME4a LINE L1 -262 5859 5457 23 0 0 0 chr17 16493421 16493444 -73011109 + AT_rich Low_complexity Low_complexity 1 23 0 1399 48 0 4 chr17 16493937 16494147 -73010406 - AluY SINE Alu -11 300 1 207 68 23 45 chr17 16494232 16494276 -73010277 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 461 222 68 12 chr17 16494337 16494499 -73010054 - L1ME4a LINE L1 -1 6120 5950 355 280 60 60 chr17 16494608 16494790 -73009763 - L1M4 LINE L1 -2990 3156 2975 4133 132 20 11 chr17 16495277 16495934 -73008619 + THE1C-int LTR MaLR 918 1580 0 1826 154 52 22 chr17 16495934 16496298 -73008255 + THE1C LTR MaLR 1 375 0 1566 213 0 19 chr17 16496624 16496939 -73007614 - AluJo SINE Alu -1 311 3 2127 113 0 14 chr17 16498544 16498878 -73005675 + AluSc SINE Alu 1 309 0 1204 175 5 14 chr17 16499080 16499291 -73005262 - AluJo SINE Alu -20 292 84 368 325 110 7 chr17 16500615 16500769 -73003784 + L3 LINE CR1 1302 1471 -106 212 330 127 29 chr17 16500889 16501062 -73003491 + MIR SINE MIR 2 191 -71 424 339 27 22 chr17 16501138 16501321 -73003232 - MIR3 SINE MIR -21 187 4 206 289 58 41 chr17 16501378 16501499 -73003054 - L2 LINE L2 -17 3255 3133 226 270 0 27 chr17 16502099 16502173 -73002380 + MIR SINE MIR 90 161 -101 225 65 0 0 chr17 16502548 16502579 -73001974 + (TG)n Simple_repeat Simple_repeat 2 32 0 2397 84 3 6 chr17 16502673 16502984 -73001569 - AluY SINE Alu -1 310 1 195 208 21 21 chr17 16503444 16503492 -73001061 - L2 LINE L2 -2 3270 3223 408 177 0 0 chr17 16503716 16503795 -73000758 - AluJ/FRAM SINE Alu -15 297 219 257 163 85 35 chr17 16503815 16503956 -73000597 + (TA)n Simple_repeat Simple_repeat 2 149 0 321 290 32 71 chr17 16503961 16504116 -73000437 + L1MC4 LINE L1 6555 6703 -1339 1844 288 26 11 chr17 16604248 16604862 -72899691 - PRIMA41-int LTR ERV1 -2620 5136 4514 1013 136 12 0 chr17 16604862 16605024 -72899529 + THE1B LTR MaLR 1 164 -200 1345 139 99 0 chr17 16605024 16605274 -72899279 - AluSg SINE Alu 0 309 38 907 147 0 0 chr17 16605374 16605524 -72899029 - L1M1 LINE L1 -5376 2189 2040 476 32 16 0 chr17 16605831 16605893 -72898660 + (GAAAA)n Simple_repeat Simple_repeat 3 65 0 487 262 107 31 chr17 16605935 16606252 -72898301 + L1PB4 LINE L1 5807 6147 -9 229 196 20 0 chr17 16606269 16606320 -72898233 + (CAG)n Simple_repeat Simple_repeat 1 52 0 2378 75 3 0 chr17 16606660 16606965 -72897588 + AluY SINE Alu 1 306 -5 971 193 6 0 chr17 16606965 16607131 -72897422 + AluJo/FRAM SINE Alu 137 303 -9 295 229 16 0 chr17 16607135 16607196 -72897357 - Tigger1 DNA MER2_type 0 2418 2357 1965 145 3 16 chr17 16607385 16607718 -72896835 - AluSx SINE Alu 0 312 1 578 188 109 0 chr17 16608050 16608178 -72896375 + MER4B LTR ERV1 9 150 -460 27 29 0 0 chr17 16608180 16608214 -72896339 + AT_rich Low_complexity Low_complexity 1 34 0 5016 149 32 26 chr17 16608214 16609240 -72895313 - L1MA2 LINE L1 -5 6299 5268 1136 147 23 81 chr17 16609245 16609299 -72895254 - THE1C LTR MaLR 0 375 319 2034 136 3 0 chr17 16609299 16609586 -72894967 - AluSg1 SINE Alu -20 289 2 1136 147 23 81 chr17 16609586 16609790 -72894763 - THE1C LTR MaLR -56 319 132 7631 20 3 2 chr17 16609890 16610923 -72893630 + L1PA3 LINE L1 5120 6155 0 835 180 17 2 chr17 16610923 16611484 -72893069 - ALR/Alpha Satellite centromeric 0 569 1 995 169 3 3 chr17 16611495 16613976 -72890577 - ALR/Alpha Satellite centromeric -13 2481 1 1132 169 7 3 chr17 16614082 16619552 -72885001 - ALR/Alpha Satellite centromeric 0 5491 1 7248 65 4 8 chr17 16619552 16620679 -72883874 + L1PA4 LINE L1 5028 6152 -3 1127 148 2 0 chr17 16620727 16622429 -72882124 - ALR/Alpha Satellite centromeric 0 1705 1 291 307 87 8 chr17 16622533 16622660 -72881893 - MIR3 SINE MIR -6 202 66 18796 58 6 1 chr17 16622861 16625912 -72878641 + L1PA4 LINE L1 3102 6155 0 3081 235 59 49 chr17 16625920 16627154 -72877399 - L1 LINE L1 -812 5222 3977 765 299 84 46 chr17 16627156 16627208 -72877345 - L1 LINE L1 -5090 865 816 2132 106 0 0 chr17 16627208 16627519 -72877034 - AluSg1 SINE Alu 0 309 1 765 299 84 46 chr17 16627519 16627858 -72876695 - L1 LINE L1 -5139 816 459 551 228 105 12 chr17 16627892 16628063 -72876490 - L1 LINE L1 -1414 4620 4434 293 218 64 39 chr17 16628063 16628141 -72876412 - L1 LINE L1 -5770 185 106 445 265 20 0 chr17 16628141 16628243 -72876310 - FLAM_C SINE Alu -37 106 3 397 267 9 19 chr17 16628245 16628350 -72876203 - L1 LINE L1 -5850 105 2 3070 266 89 26 chr17 16630444 16631649 -72872904 + L1MEc LINE L1 235 1322 -4893 2094 130 3 3 chr17 16631649 16631950 -72872603 + AluSx SINE Alu 1 301 -11 3070 266 89 26 chr17 16631950 16631983 -72872570 + L1MEc LINE L1 1322 1351 -4864 503 143 0 0 chr17 16631983 16632053 -72872500 + AluJ/FLAM SINE Alu 2 71 -241 2604 165 19 52 chr17 16632156 16632364 -72872189 - Tigger1 DNA MER2_type -914 1504 1291 1887 151 3 22 chr17 16632364 16632682 -72871871 - AluSq SINE Alu -1 312 1 2604 165 19 52 chr17 16632682 16632707 -72871846 - Tigger1 DNA MER2_type -1127 1291 1267 261 0 0 0 chr17 16632707 16632736 -72871817 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2604 165 19 52 chr17 16632736 16633017 -72871536 - Tigger1 DNA MER2_type -1151 1267 1006 553 184 19 0 chr17 16633012 16633115 -72871438 - Tigger1 DNA MER2_type -1908 510 406 * 331 286 30 28 chr17 16634054 16634366 -72870187 - LSAU Satellite Satellite 0 498 141 512 208 0 22 chr17 16634417 16634595 -72869958 + GA-rich Low_complexity Low_complexity 4 177 0 525 193 0 0 chr17 16635690 16635835 -72868718 + (CA)n Simple_repeat Simple_repeat 2 146 0 406 307 7 0 chr17 16635839 16635992 -72868561 + GA-rich Low_complexity Low_complexity 1 154 0 613 191 17 17 chr17 16636876 16636991 -72867562 - FLAM_C SINE Alu -18 115 1 239 191 0 0 chr17 16638128 16638175 -72866378 - LTR66 LTR ERVL -170 440 394 3104 241 59 16 chr17 16638281 16639193 -72865360 - L1MA9 LINE L1 -25 6287 5337 17586 87 1 1 chr17 16639202 16641516 -72863037 + L1P LINE L1 7 2320 -3826 18926 49 2 0 chr17 16641616 16643957 -72860596 - L1P LINE L1 -1898 4248 1904 1323 121 4 0 chr17 16643957 16653859 -72850694 + ALR/Alpha Satellite centromeric 1 9939 0 1727 151 50 13 chr17 16653967 16654266 -72850287 - MSTA LTR MaLR -116 312 3 429 218 20 69 chr17 16654269 16654471 -72850082 + L1MEc LINE L1 2047 2238 -4158 231 267 0 53 chr17 16655167 16655242 -72849311 + L2 LINE L2 3239 3309 -4 1540 231 33 19 chr17 16655306 16655666 -72848887 - MLT1A1 LTR MaLR 0 365 1 257 260 0 48 chr17 16656696 16656800 -72847753 - L1ME4a LINE L1 -48 6073 5975 195 189 27 0 chr17 16657260 16657297 -72847256 - MER5A DNA MER1_type -137 52 15 259 291 42 74 chr17 16657551 16657603 -72846950 - L1ME4a LINE L1 -819 5327 5275 2213 112 3 0 chr17 16657603 16657897 -72846656 - AluSp SINE Alu -18 295 1 259 291 42 74 chr17 16657897 16657975 -72846578 - L1ME4a LINE L1 -871 5275 5196 2373 130 8 8 chr17 16657975 16658330 -72846223 - THE1A LTR MaLR 0 355 1 259 291 42 74 chr17 16658330 16658576 -72845977 - L1ME4a LINE L1 -950 5196 4962 525 236 24 98 chr17 16658667 16658913 -72845640 - MLT1H LTR MaLR -207 342 115 216 353 35 17 chr17 16659406 16659522 -72845031 + MIR3 SINE MIR 13 130 -78 301 259 27 27 chr17 16659807 16659919 -72844634 - LTR41 LTR ERVL -6 767 656 287 230 97 42 chr17 16660613 16660778 -72843775 - LTR41 LTR ERVL -598 175 2 1982 163 0 3 chr17 16660940 16661253 -72843300 - AluSx SINE Alu 0 312 1 403 221 60 166 chr17 16661264 16661480 -72843073 + MLT1I LTR MaLR 114 285 -124 2002 129 0 0 chr17 16661480 16661759 -72842794 + AluY SINE Alu 1 279 -32 403 221 60 166 chr17 16661759 16661873 -72842680 + MLT1I LTR MaLR 285 409 0 474 264 75 13 chr17 16661873 16662032 -72842521 - MIR SINE MIR -67 195 27 749 107 11 0 chr17 16662063 16662172 -72842381 - BSR/Beta Satellite Satellite 0 110 1 2214 159 12 56 chr17 16662451 16662860 -72841693 - MSTD LTR MaLR -2 394 4 551 216 7 16 chr17 16663129 16663447 -72841106 + CT-rich Low_complexity Low_complexity 1 315 0 366 237 26 66 chr17 16663493 16663645 -72840908 + L1M4 LINE L1 3422 3567 -2579 602 312 45 61 chr17 16663889 16664334 -72840219 - L1MC4a LINE L1 -1880 5928 5491 4685 248 37 41 chr17 16664569 16666411 -72838142 + L1PA7 LINE L1 10 1825 -4626 9922 131 5 61 chr17 16666415 16668555 -72835998 + L1PA7 LINE L1 4101 6184 -285 1962 132 61 3 chr17 16668555 16668850 -72835703 + AluSp SINE Alu 1 312 -1 9922 131 5 61 chr17 16668850 16669117 -72835436 + L1PA7 LINE L1 6184 6464 -5 5160 250 73 24 chr17 16670018 16671117 -72833436 + L1 LINE L1 2888 4126 -2020 185 0 40 0 chr17 16671117 16671142 -72833411 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 5160 250 73 24 chr17 16671142 16671998 -72832555 + L1 LINE L1 4126 4939 -1207 933 129 0 0 chr17 16671999 16672170 -72832383 + (TA)n Simple_repeat Simple_repeat 2 172 0 2086 292 60 1 chr17 16672479 16673147 -72831406 - PRIMA41-int LTR ERV1 -1593 6163 5457 3010 307 40 35 chr17 16673247 16674474 -72830079 - PRIMA41-int LTR ERV1 -4770 2986 1737 5771 155 17 9 chr17 16674474 16675435 -72829118 + LTR5 LTR ERVK 2 969 0 3010 307 40 35 chr17 16675435 16675592 -72828961 - PRIMA41-int LTR ERV1 -6019 1737 1582 291 328 53 12 chr17 16675746 16675917 -72828636 - PRIMA41-int LTR ERV1 -6310 1446 1269 1642 254 2 2 chr17 16676410 16676820 -72827733 - L1MC4a LINE L1 -887 5259 4850 710 89 10 0 chr17 16676824 16677081 -72827472 + CER Satellite Satellite 1 259 -42 6232 260 60 17 chr17 16677081 16677393 -72827160 - L1M4 LINE L1 -1221 6344 6047 1895 164 3 7 chr17 16677393 16677698 -72826855 - AluSg SINE Alu -6 304 1 6232 260 60 17 chr17 16677698 16678050 -72826503 - L1M4 LINE L1 -1518 6047 5711 1704 221 64 12 chr17 16678050 16678457 -72826096 - MSTA LTR MaLR 0 428 1 7341 211 31 17 chr17 16678457 16680086 -72824467 - MSTA-int LTR MaLR 0 1651 1 1764 222 36 14 chr17 16680086 16680505 -72824048 - MSTA LTR MaLR 0 428 1 6232 260 60 17 chr17 16680505 16680872 -72823681 - L1M4 LINE L1 -1854 5711 5361 1924 148 3 0 chr17 16680872 16681185 -72823368 - AluSx SINE Alu 0 314 1 6232 260 60 17 chr17 16681185 16683077 -72821476 - L1M4 LINE L1 -2204 5361 3287 34350 87 28 0 chr17 16683086 16687607 -72816946 + L1P LINE L1 7 4655 -1491 10707 193 62 12 chr17 16687598 16689762 -72814791 - L1M4 LINE L1 -4406 3159 886 * 2350 255 43 31 chr17 16689749 16690512 -72814041 - L1M4 LINE L1 -6832 733 17 * 654 125 0 19 chr17 16690523 16690627 -72813926 - L1PA16 LINE L1 -21 6145 6044 3711 172 26 9 chr17 16690632 16691313 -72813240 - L1PA16 LINE L1 -84 6082 5390 352 140 0 0 chr17 16691317 16691374 -72813179 + L1P LINE L1 5304 5360 -808 2469 70 0 0 chr17 16691376 16691676 -72812877 + AluY SINE Alu 1 300 -11 541 297 203 3 chr17 16692427 16692737 -72811816 + MLT1H1 LTR MaLR 32 405 -162 21 0 0 0 chr17 16692849 16692870 -72811683 + AT_rich Low_complexity Low_complexity 1 21 0 257 200 0 0 chr17 16692873 16692918 -72811635 + MLT1H1 LTR MaLR 546 590 0 1073 253 74 38 chr17 16693320 16693739 -72810814 - L1MD2 LINE L1 -18 6341 5908 22 35 0 0 chr17 16694711 16694740 -72809813 + GC_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr17 16695795 16695817 -72808736 + GC_rich Low_complexity Low_complexity 1 22 0 329 159 35 53 chr17 16695871 16695984 -72808569 - MER45C DNA AcHobo -355 598 488 596 163 108 16 chr17 16698251 16698380 -72806173 + AluJb SINE Alu 1 141 -171 34 45 0 15 chr17 16698401 16698419 -72806134 + AT_rich Low_complexity Low_complexity 1 18 -47 2226 90 0 3 chr17 16698419 16698707 -72805846 + AluY SINE Alu 1 287 -24 34 45 0 15 chr17 16698707 16698754 -72805799 + AT_rich Low_complexity Low_complexity 18 65 0 2144 117 7 0 chr17 16698761 16699061 -72805492 + AluSp SINE Alu 1 302 -11 315 71 0 0 chr17 16699120 16699162 -72805391 + (CCTG)n Simple_repeat Simple_repeat 1 42 0 620 139 0 133 chr17 16699163 16699329 -72805224 - AluJb SINE Alu -32 280 137 252 266 28 37 chr17 16699674 16699783 -72804770 + LTR54B LTR ERV1 39 146 -352 186 43 0 0 chr17 16702185 16702208 -72802345 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2140 124 0 3 chr17 16702604 16702925 -72801628 + AluSc SINE Alu 1 320 0 911 134 169 6 chr17 16703710 16703882 -72800671 + AluSg/x SINE Alu 96 295 -17 228 246 0 0 chr17 16704677 16704742 -72799811 + L1MC/D LINE L1 5665 5729 -630 543 206 0 0 chr17 16705153 16705328 -72799225 + GA-rich Low_complexity Low_complexity 2 176 0 239 177 48 0 chr17 16705328 16705390 -72799163 + (CAGA)n Simple_repeat Simple_repeat 1 65 0 551 195 0 6 chr17 16705390 16705554 -72798999 + GA-rich Low_complexity Low_complexity 2 164 0 317 196 0 10 chr17 16705576 16705678 -72798875 + GA-rich Low_complexity Low_complexity 2 102 0 567 174 0 0 chr17 16705699 16705848 -72798705 + GA-rich Low_complexity Low_complexity 2 150 0 642 192 3 3 chr17 16705885 16706212 -72798341 + GA-rich Low_complexity Low_complexity 1 327 0 224 189 0 0 chr17 16706298 16706335 -72798218 + (CAG)n Simple_repeat Simple_repeat 2 38 0 1895 102 11 21 chr17 16707462 16707768 -72796785 - AluSx SINE Alu 0 303 1 455 225 17 16 chr17 16707900 16708036 -72796517 - MER39B LTR ERV1 -242 411 299 798 178 0 0 chr17 16708036 16708269 -72796284 + GA-rich Low_complexity Low_complexity 1 233 0 21 0 0 0 chr17 16708369 16708390 -72796163 + AT_rich Low_complexity Low_complexity 1 21 0 3139 114 54 22 chr17 16708407 16708521 -72796032 - Tigger1 DNA MER2_type -146 2272 2163 3032 212 22 78 chr17 16708521 16709543 -72795010 - LTR5 LTR ERVK 0 969 5 3139 114 54 22 chr17 16709543 16709929 -72794624 - Tigger1 DNA MER2_type -255 2163 1756 196 267 0 0 chr17 16710947 16710992 -72793561 - L2 LINE L2 -8 3305 3261 2035 194 98 54 chr17 16711535 16712075 -72792478 - LTR6A LTR ERV1 0 564 1 2368 216 21 0 chr17 16712635 16713157 -72791396 + L1PB4 LINE L1 5620 6152 -4 263 220 0 22 chr17 16714282 16714373 -72790180 - L2 LINE L2 -1230 2084 1996 317 212 0 0 chr17 16714435 16714501 -72790052 - MER103 DNA DNA -75 91 26 267 114 0 0 chr17 16714521 16714565 -72789988 + (TG)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr17 16715153 16715174 -72789379 + AT_rich Low_complexity Low_complexity 1 21 0 9595 207 26 3 chr17 16715485 16717757 -72786796 + L1P LINE L1 3016 5331 -815 5193 173 42 61 chr17 16717754 16718855 -72785698 + L1M1 LINE L1 1477 2556 -5009 * 445 316 6 0 chr17 16719195 16719369 -72785184 + CT-rich Low_complexity Low_complexity 1 175 0 229 296 17 0 chr17 16719373 16719488 -72785065 + (TG)n Simple_repeat Simple_repeat 2 118 0 936 99 0 0 chr17 16719831 16719962 -72784591 - L1P LINE L1 -6000 146 16 1215 157 5 0 chr17 16719962 16727352 -72777201 + ALR/Alpha Satellite centromeric 1 7427 0 1134 153 2 1 chr17 16727460 16731308 -72773245 + ALR/Alpha Satellite centromeric 1 3850 -47 1162 159 1 0 chr17 16731417 16735985 -72768568 + ALR/Alpha Satellite centromeric 1 4571 -38 1153 162 2 2 chr17 16736087 16739754 -72764799 + ALR/Alpha Satellite centromeric 1 3664 -7 1321 135 4 3 chr17 16739870 16749025 -72755528 + ALR/Alpha Satellite centromeric 1 9161 -52 1112 166 6 1 chr17 16749125 16752048 -72752505 - ALR/Alpha Satellite centromeric 0 2938 1 1968 206 100 34 chr17 16752558 16753087 -72751466 - LTR6A LTR ERV1 0 564 1 310 191 59 0 chr17 16753302 16753370 -72751183 - L2 LINE L2 0 3272 3201 2389 214 19 0 chr17 16753686 16754209 -72750344 + L1PB4 LINE L1 5620 6152 -4 242 242 0 22 chr17 16755343 16755434 -72749119 - L2 LINE L2 -1230 2084 1996 314 250 0 0 chr17 16755494 16755574 -72748979 - MER103 DNA DNA -75 91 12 10453 202 25 6 chr17 16756527 16758798 -72745755 + L1P LINE L1 3016 5331 -815 2649 215 43 0 chr17 16758795 16759301 -72745252 + L1M1 LINE L1 1477 2004 -5561 * 330 276 74 84 chr17 16859312 16859515 -72645038 - L1ME LINE L1 -386 5735 5535 1618 131 4 0 chr17 16859545 16859774 -72644779 + AluSq SINE Alu 68 297 -16 675 269 105 19 chr17 16859846 16860217 -72644336 - L1ME4a LINE L1 -262 5859 5457 23 0 0 0 chr17 16860300 16860323 -72644230 + AT_rich Low_complexity Low_complexity 1 23 0 1389 48 0 4 chr17 16860816 16861026 -72643527 - AluY SINE Alu -11 300 1 207 68 23 45 chr17 16861111 16861155 -72643398 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 462 222 68 12 chr17 16861216 16861378 -72643175 - L1ME4a LINE L1 -1 6120 5950 359 226 97 86 chr17 16861483 16861669 -72642884 - L1 LINE L1 -2984 3162 2975 4062 132 20 11 chr17 16862156 16862813 -72641740 + THE1C-int LTR MaLR 918 1580 0 1958 154 52 22 chr17 16862813 16863177 -72641376 + THE1C LTR MaLR 1 375 0 1554 213 0 19 chr17 16863503 16863818 -72640735 - AluJo SINE Alu -1 311 3 957 262 34 17 chr17 16865740 16866034 -72638519 - MER89-int LTR ERV1 -5142 1659 1361 1477 206 54 12 chr17 16866043 16866378 -72638175 - MLT1A1 LTR MaLR -4 361 13 309 219 0 37 chr17 16866383 16866465 -72638088 - MER89-int LTR ERV1 -5438 1363 1285 252 363 15 0 chr17 16867594 16867729 -72636824 + (CA)n Simple_repeat Simple_repeat 1 137 0 2357 89 0 3 chr17 16871291 16871594 -72632959 + AluY SINE Alu 1 302 -9 1177 99 12 19 chr17 16871595 16871757 -72632796 + AluSc SINE Alu 130 290 -19 180 0 0 0 chr17 16871799 16871819 -72632734 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 627 120 74 0 chr17 16871825 16871933 -72632620 - AluSp/q SINE Alu -24 289 174 396 55 0 0 chr17 16871948 16872003 -72632550 + (TTGG)n Simple_repeat Simple_repeat 1 55 0 2067 115 0 7 chr17 16872003 16872290 -72632263 - AluSq SINE Alu -28 285 1 340 309 63 29 chr17 16872295 16872502 -72632051 + L1ME3A LINE L1 5360 5573 -589 781 121 28 121 chr17 16872622 16872682 -72631871 - L1MA8 LINE L1 -69 6222 6158 2085 106 41 7 chr17 16872682 16872974 -72631579 - AluSg SINE Alu -8 302 1 781 121 28 121 chr17 16872974 16873052 -72631501 - L1MA8 LINE L1 -133 6158 6108 2452 70 3 0 chr17 16873052 16873350 -72631203 - AluY SINE Alu -12 299 1 781 121 28 121 chr17 16873350 16873425 -72631128 - L1MA8 LINE L1 -183 6108 6028 1212 284 61 31 chr17 16873444 16873989 -72630564 + L1ME3A LINE L1 5600 6160 -10 21 36 0 0 chr17 16874039 16874067 -72630486 + AT_rich Low_complexity Low_complexity 1 28 0 770 229 69 44 chr17 16874110 16874448 -72630105 - L1ME LINE L1 -4572 1429 786 1955 226 84 86 chr17 16874852 16875433 -72629120 - L1ME LINE L1 -4981 1089 509 2326 158 44 5 chr17 16875433 16875843 -72628710 + MSTB LTR MaLR 1 426 0 1955 226 84 86 chr17 16875843 16876320 -72628233 - L1ME LINE L1 -5561 509 33 27 22 0 22 chr17 16876328 16876360 -72628193 + AT_rich Low_complexity Low_complexity 1 33 -11 1697 191 0 13 chr17 16876360 16876658 -72627895 - AluSx SINE Alu -18 294 1 27 22 0 22 chr17 16876658 16876670 -72627883 + AT_rich Low_complexity Low_complexity 33 44 0 276 260 83 10 chr17 16876897 16877022 -72627531 - L1MC/D LINE L1 -302 5819 5692 1744 124 26 56 chr17 16877308 16877614 -72626939 - Tigger3(Golem) DNA MER2_type -2 3027 2731 2112 142 36 28 chr17 16877616 16877975 -72626578 - THE1B LTR MaLR -2 362 1 10969 109 23 13 chr17 16877980 16878283 -72626270 - THE1B-int LTR MaLR -6 1574 1276 2519 74 0 0 chr17 16878283 16878582 -72625971 - AluY SINE Alu 0 311 13 10969 109 23 13 chr17 16878582 16879836 -72624717 - THE1B-int LTR MaLR -304 1276 1 2005 144 42 33 chr17 16879836 16880197 -72624356 - THE1B LTR MaLR 0 364 1 2583 103 38 16 chr17 16880197 16880624 -72623929 - Tigger3(Golem) DNA MER2_type -294 2735 2300 652 164 0 3 chr17 16880629 16880741 -72623812 - Tigger3(Golem) DNA MER2_type -2920 109 11 428 285 74 22 chr17 16880844 16881067 -72623486 - L1ME3A LINE L1 0 6162 5930 2414 52 0 35 chr17 16881108 16881418 -72623135 - AluY SINE Alu -12 299 1 361 198 33 57 chr17 16881464 16881638 -72622915 - L1ME3A LINE L1 -209 5955 5770 1438 229 101 24 chr17 16881661 16882206 -72622347 - L1ME3 LINE L1 -324 5838 5254 504 108 135 0 chr17 16882209 16882283 -72622270 + 5S rRNA rRNA 2 85 -36 2138 93 11 4 chr17 16882424 16882704 -72621849 + AluSq SINE Alu 15 296 -17 29 0 0 0 chr17 16882706 16882735 -72621818 + AT_rich Low_complexity Low_complexity 1 29 0 185 347 13 13 chr17 16883050 16883125 -72621428 + MIR SINE MIR 20 94 -168 2337 80 0 10 chr17 16885402 16885703 -72618850 - AluY SINE Alu -13 298 1 333 0 0 0 chr17 16885966 16886003 -72618550 + (CA)n Simple_repeat Simple_repeat 2 38 0 42 57 0 0 chr17 16886080 16886150 -72618403 + GC_rich Low_complexity Low_complexity 1 70 0 23 68 0 0 chr17 16886205 16886249 -72618304 + GC_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr17 16888121 16888142 -72616411 + AT_rich Low_complexity Low_complexity 1 21 0 293 68 0 0 chr17 16888590 16888634 -72615919 + Alu SINE Alu 256 299 0 638 272 94 48 chr17 16891524 16891674 -72612879 - L1ME3 LINE L1 -1053 5093 4951 2660 46 0 3 chr17 16891674 16891980 -72612573 - AluY SINE Alu -6 305 1 638 272 94 48 chr17 16891980 16892419 -72612134 - L1ME3 LINE L1 -1195 4951 2681 2629 47 0 0 chr17 16892981 16893282 -72611271 + AluY SINE Alu 1 301 -10 796 170 55 83 chr17 16893498 16893716 -72610837 + L1MA8 LINE L1 6055 6266 -25 1470 171 3 51 chr17 16893810 16894103 -72610450 - AluJb SINE Alu -33 279 1 180 0 0 0 chr17 16894375 16894395 -72610158 + (TA)n Simple_repeat Simple_repeat 2 21 0 2077 97 13 7 chr17 16894586 16894884 -72609669 - AluSc SINE Alu -9 300 1 20035 46 2 1 chr17 16895162 16898407 -72606146 - L1PA5 LINE L1 0 6154 2933 2384 104 0 0 chr17 16898833 16899142 -72605411 - AluSg SINE Alu -1 309 1 2251 80 3 52 chr17 16899164 16899491 -72605062 - AluY SINE Alu 0 311 1 2397 82 3 0 chr17 16899561 16899866 -72604687 + AluY SINE Alu 1 306 -5 1026 137 0 0 chr17 16899881 16900027 -72604526 + AluSc SINE Alu 145 290 -19 2817 29 0 0 chr17 16900027 16900334 -72604219 + AluY SINE Alu 1 307 -4 203 176 59 39 chr17 16900949 16901000 -72603553 - MER5A DNA MER1_type -137 52 1 332 277 18 0 chr17 16901999 16902111 -72602442 - L2 LINE L2 -5 3267 3154 377 312 110 41 chr17 16902419 16903081 -72601472 - L2 LINE L2 -257 3056 2317 3316 38 15 0 chr17 16903192 16903590 -72600963 + L1PA7 LINE L1 5751 6154 0 2380 68 10 0 chr17 16903640 16903935 -72600618 + AluY SINE Alu 3 300 -11 2523 51 3 0 chr17 16903946 16904241 -72600312 + AluY SINE Alu 1 296 -15 186 208 0 0 chr17 16904854 16904902 -72599651 + CT-rich Low_complexity Low_complexity 3 50 0 * 486 136 0 0 chr17 16904899 16904980 -72599573 + (TTCC)n Simple_repeat Simple_repeat 4 84 0 2121 128 23 7 chr17 16904992 16905297 -72599256 - AluSx SINE Alu -2 310 1 2554 61 0 0 chr17 16905673 16905969 -72598584 - AluY SINE Alu -15 296 1 2429 84 0 3 chr17 16905969 16906267 -72598286 - AluY SINE Alu -13 298 1 189 107 0 0 chr17 16906270 16906298 -72598255 + (TTTC)n Simple_repeat Simple_repeat 3 30 0 208 323 15 0 chr17 16906387 16906452 -72598101 - L2 LINE L2 -20 3252 3187 2337 97 0 0 chr17 16907405 16907694 -72596859 - AluSc SINE Alu -20 289 1 1461 108 0 0 chr17 16909753 16909938 -72594615 + AluSq SINE Alu 1 185 -128 252 276 26 0 chr17 16910281 16910357 -72594196 - MER116 DNA Mariner -1 79 2 272 244 51 0 chr17 16910369 16910447 -72594106 - MIR3 SINE MIR -44 164 83 288 272 0 0 chr17 16910555 16910647 -72593906 - L1MC4 LINE L1 -1337 6705 6614 * 301 267 0 0 chr17 16910567 16910657 -72593896 + L1MC4 LINE L1 6614 6703 -1339 2299 109 0 0 chr17 16910674 16910968 -72593585 - AluSp SINE Alu -19 294 1 727 239 49 51 chr17 16910974 16911083 -72593470 + L1M4c LINE L1 2101 2209 -4173 2398 107 0 0 chr17 16911083 16911392 -72593161 + AluSg1 SINE Alu 1 309 0 727 239 49 51 chr17 16911392 16911715 -72592838 + L1M4c LINE L1 2209 2533 -3849 295 169 68 0 chr17 16911728 16911787 -72592766 + L1MA9 LINE L1 6250 6312 0 535 232 15 66 chr17 16911801 16911904 -72592649 + L1MA10 LINE L1 6023 6116 -218 2092 118 0 4 chr17 16911904 16912225 -72592328 + AluSc SINE Alu 1 320 0 535 232 15 66 chr17 16912225 16912316 -72592237 + L1MA10 LINE L1 6116 6210 -124 1708 232 82 37 chr17 16912411 16913269 -72591284 + L1MCa LINE L1 2316 3203 -3223 1260 57 0 40 chr17 16914116 16914293 -72590260 + L1PB1 LINE L1 5982 6151 0 22 0 0 0 chr17 16914582 16914604 -72589949 + AT_rich Low_complexity Low_complexity 1 22 0 546 270 52 37 chr17 16916013 16916283 -72588270 + L1MCa LINE L1 4170 4443 -1983 922 207 20 5 chr17 16916299 16916502 -72588051 + L1PB4 LINE L1 4874 5079 -1067 * 2270 178 60 7 chr17 16916489 16917076 -72587477 + L1PB4 LINE L1 5514 6161 0 579 277 69 52 chr17 16918554 16919020 -72585533 - L1M4 LINE L1 -2232 3914 3441 691 98 98 25 chr17 16919037 16919159 -72585394 - AluSx SINE Alu -3 307 177 523 99 0 0 chr17 16919157 16919228 -72585325 - AluSx SINE Alu -175 137 67 * 1219 140 36 5 chr17 16919228 16919421 -72585132 - AluSx SINE Alu -113 199 1 308 314 57 19 chr17 16919423 16919633 -72584920 - L1M4 LINE L1 -2721 3425 3208 2404 91 0 0 chr17 16919638 16919935 -72584618 - AluSq SINE Alu -16 297 1 2508 71 3 6 chr17 16919945 16920256 -72584297 - AluSp SINE Alu -3 310 1 320 276 79 49 chr17 16920307 16920510 -72584043 - L1M4 LINE L1 -2210 3936 3728 2433 62 3 20 chr17 16920520 16920824 -72583729 - AluY SINE Alu -12 299 1 23 33 0 0 chr17 16920946 16920976 -72583577 + AT_rich Low_complexity Low_complexity 1 30 0 580 281 52 13 chr17 16921367 16921598 -72582955 - MIR SINE MIR -16 246 7 380 269 40 62 chr17 16921604 16921831 -72582722 - L2 LINE L2 -169 3103 2882 514 171 143 0 chr17 16922532 16922637 -72581916 - MER103 DNA DNA -46 120 1 3946 178 65 48 chr17 16923377 16924298 -72580255 - L1MB7 LINE L1 -10 6174 5256 1306 207 48 40 chr17 16924608 16924961 -72579592 - L1MB7 LINE L1 -912 5234 4879 * 5632 226 38 52 chr17 16924959 16925301 -72579252 - L1MB7 LINE L1 -1893 4253 3908 2391 99 0 6 chr17 16925301 16925613 -72578940 - AluY SINE Alu -1 310 1 5632 226 38 52 chr17 16925613 16925982 -72578571 - L1MB7 LINE L1 -2238 3908 3536 2432 92 7 0 chr17 16925982 16926286 -72578267 - AluSp SINE Alu -7 306 1 5632 226 38 52 chr17 16926286 16927427 -72577126 - L1MB7 LINE L1 -2610 3536 2425 1929 107 40 20 chr17 16927436 16927598 -72576955 - AluSq SINE Alu -7 306 134 2300 110 0 0 chr17 16927598 16927897 -72576656 - AluSc SINE Alu -10 299 1 1929 107 40 20 chr17 16927897 16928034 -72576519 - AluSq SINE Alu -179 134 1 363 145 12 48 chr17 16928035 16928118 -72576435 - L1 LINE L1 -893 5253 5174 359 114 0 14 chr17 16929115 16929185 -72575368 - L1PA16 LINE L1 -18 6148 6080 728 239 12 6 chr17 16929727 16929890 -72574663 - FRAM SINE Alu -2 164 1 1926 150 3 7 chr17 16930433 16930726 -72573827 + AluSq SINE Alu 1 292 -21 1279 247 58 80 chr17 16930822 16930889 -72573664 - MER82 DNA MER2_type 0 653 586 2029 91 84 4 chr17 16930889 16931163 -72573390 - AluSp SINE Alu -17 296 1 1279 247 58 80 chr17 16931163 16931560 -72572993 - MER82 DNA MER2_type -67 586 199 230 318 56 9 chr17 16932618 16932725 -72571828 + MER5B DNA MER1_type 50 161 -17 281 336 0 40 chr17 16932897 16933046 -72571507 - MER5B DNA MER1_type -33 145 3 204 40 0 0 chr17 16934062 16934087 -72570466 + (GGAGAA)n Simple_repeat Simple_repeat 6 30 0 184 316 13 13 chr17 16936130 16936209 -72568344 + MIR3 SINE MIR 118 196 -12 3494 91 20 14 chr17 16938149 16938657 -72565896 + MER9 LTR ERVK 1 511 0 2246 114 7 0 chr17 16939420 16939727 -72564826 - AluY SINE Alu -2 309 1 2889 3 0 0 chr17 16939966 16940269 -72564284 - AluYa5 SINE Alu -8 303 1 446 295 113 43 chr17 16940479 16940924 -72563629 - L1ME4a LINE L1 -102 6019 5499 2612 51 0 6 chr17 16940924 16941235 -72563318 - AluY SINE Alu -2 309 1 446 295 113 43 chr17 16941235 16941497 -72563056 - L1ME4a LINE L1 -622 5499 5257 1550 200 24 0 chr17 16941534 16941829 -72562724 - AluJb SINE Alu -10 302 1 237 83 0 0 chr17 16942028 16942064 -72562489 + (CA)n Simple_repeat Simple_repeat 1 36 0 2116 123 10 10 chr17 16942484 16942792 -72561761 + AluSx SINE Alu 1 308 -4 835 172 0 8 chr17 16944035 16944169 -72560384 + AluSq/x SINE Alu 1 133 -179 21 0 0 0 chr17 16944607 16944628 -72559925 + AT_rich Low_complexity Low_complexity 1 21 0 183 281 288 13 chr17 16944714 16944867 -72559686 + MIR SINE MIR 38 232 -30 2129 135 78 66 chr17 16944881 16944923 -72559630 - MSTA LTR MaLR 0 428 388 2135 141 0 0 chr17 16944923 16945222 -72559331 + AluSx SINE Alu 1 299 -13 2129 135 78 66 chr17 16945222 16945269 -72559284 - MSTA LTR MaLR -40 388 343 2327 97 0 7 chr17 16945269 16945568 -72558985 + AluY SINE Alu 2 298 -13 2129 135 78 66 chr17 16945568 16945900 -72558653 - MSTA LTR MaLR -85 343 1 1530 186 19 0 chr17 16946048 16946306 -72558247 + AluJb SINE Alu 1 263 -49 395 105 0 7 chr17 16946307 16946368 -72558185 - Alu SINE Alu -245 55 3 2087 135 13 13 chr17 16946376 16946688 -72557865 - AluSx SINE Alu 0 312 1 486 75 0 0 chr17 16946757 16946824 -72557729 + (CA)n Simple_repeat Simple_repeat 2 68 0 2451 68 3 0 chr17 16949732 16950025 -72554528 + AluY SINE Alu 5 298 -13 241 270 0 0 chr17 16950576 16950639 -72553914 - L1ME4a LINE L1 -104 6017 5955 231 61 0 0 chr17 16950639 16950672 -72553881 + (TG)n Simple_repeat Simple_repeat 2 34 0 340 276 0 75 chr17 16950744 16950878 -72553675 + L2 LINE L2 3189 3312 -1 248 261 136 45 chr17 16951073 16951249 -72553304 - LTR67 LTR ERVL -8 549 358 655 299 82 49 chr17 16952365 16953271 -72551282 + L1MEc LINE L1 988 1938 -4669 1868 243 69 59 chr17 16953273 16953838 -72550715 + L1MEc LINE L1 3478 4058 -2368 2288 84 3 0 chr17 16953838 16954150 -72550403 - AluSp SINE Alu 0 313 1 1868 243 69 59 chr17 16954150 16954493 -72550060 + L1MEc LINE L1 4058 4396 -2030 629 217 25 84 chr17 16954751 16954822 -72549731 - MIR SINE MIR -3 259 185 2230 115 3 3 chr17 16954822 16955126 -72549427 - AluSx SINE Alu -8 304 1 629 217 25 84 chr17 16955126 16955257 -72549296 - MIR SINE MIR -77 185 69 1096 109 81 97 chr17 16955478 16955593 -72548960 - L1MB1 LINE L1 0 6168 6053 1218 102 56 10 chr17 16955593 16955789 -72548764 - L1PA16 LINE L1 -9 6157 5953 1096 109 81 97 chr17 16955789 16955920 -72548633 - L1MB1 LINE L1 -115 6053 5926 1467 126 53 148 chr17 16955921 16956333 -72548220 + THE1C LTR MaLR 1 373 -2 8892 125 50 9 chr17 16956335 16957689 -72546864 + THE1C-int LTR MaLR 1 1410 -170 3258 141 17 33 chr17 16957710 16958286 -72546267 - L1MB1 LINE L1 -235 5933 5367 647 176 59 17 chr17 16958895 16959014 -72545539 - FLAM_C SINE Alu -9 124 1 200 367 100 0 chr17 16959425 16959545 -72545008 + MIR3 SINE MIR 70 201 -7 729 158 0 47 chr17 16959573 16959700 -72544853 + FLAM_A SINE Alu 12 132 -10 1714 179 124 29 chr17 16959799 16960218 -72544335 + LTR2B LTR ERV1 32 490 0 404 145 0 0 chr17 16960456 16960518 -72544035 + MER45A DNA AcHobo 65 126 -52 1993 137 26 16 chr17 16962101 16962408 -72542145 - AluSg SINE Alu 0 310 1 413 113 32 0 chr17 16962732 16962794 -72541759 - AluSg/x SINE Alu -83 229 166 1665 170 61 4 chr17 16963243 16963407 -72541146 - AluJo SINE Alu -13 299 111 234 0 0 0 chr17 16963407 16963433 -72541120 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1665 170 61 4 chr17 16963433 16963545 -72541008 - AluJo SINE Alu -201 111 7 209 327 97 18 chr17 16964178 16964291 -72540262 + MER91A DNA MER1_type 48 169 -27 3338 132 31 26 chr17 16964291 16964869 -72539684 - LTR35 LTR ERV1 0 618 38 2211 112 0 7 chr17 16965154 16965459 -72539094 - AluSx SINE Alu -9 303 1 574 129 0 0 chr17 16965740 16965833 -72538720 - LTR9B LTR ERV1 -84 560 468 1594 287 38 9 chr17 16965833 16966383 -72538170 - L1ME3A LINE L1 -286 5884 5319 392 225 49 21 chr17 16966435 16966577 -72537976 - L1ME3A LINE L1 -814 5332 5187 317 221 0 11 chr17 16966578 16966673 -72537880 + CT-rich Low_complexity Low_complexity 4 97 0 7141 50 8 36 chr17 16966693 16968279 -72536274 + SVA Other Other 35 1379 -7 383 227 10 0 chr17 16968284 16968381 -72536172 - L1ME3A LINE L1 -966 5180 5083 2336 81 0 26 chr17 16968388 16968698 -72535855 + AluY SINE Alu 1 302 -9 252 263 13 0 chr17 16968700 16968776 -72535777 + L1MB7 LINE L1 6108 6184 0 32 81 0 0 chr17 16968858 16968932 -72535621 + AT_rich Low_complexity Low_complexity 1 74 0 2031 134 0 0 chr17 16968935 16969239 -72535314 + AluSx SINE Alu 1 304 0 806 219 10 42 chr17 16969920 16970112 -72534441 + MER58A DNA MER1_type 30 215 -9 349 66 262 0 chr17 16970129 16970190 -72534363 + MADE1 DNA Mariner 1 77 -3 1374 155 109 0 chr17 16970257 16970496 -72534057 + AluJb SINE Alu 1 265 -47 2348 185 69 14 chr17 16971319 16971828 -72532725 + MER68 LTR ERV1 1 537 -25 1610 180 40 15 chr17 16971832 16972159 -72532394 + L1MB5 LINE L1 5802 6136 -38 4407 169 50 18 chr17 16972174 16973119 -72531434 - L1 LINE L1 -1337 4809 3835 4430 137 9 75 chr17 16973123 16974267 -72530286 + L1PB3 LINE L1 4970 6033 -140 1379 217 0 14 chr17 16974306 16974592 -72529961 + AluJo SINE Alu 1 282 -30 301 313 106 21 chr17 16974646 16975033 -72529520 - L1ME LINE L1 -429 5692 5270 3862 224 167 73 chr17 16975139 16975483 -72529070 - HAL1 LINE L1 -109 2398 2088 2155 97 10 0 chr17 16975483 16975781 -72528772 - AluSx SINE Alu -11 301 1 3862 224 167 73 chr17 16975781 16976653 -72527900 - HAL1 LINE L1 -419 2088 1299 2349 114 41 3 chr17 16976653 16977022 -72527531 - L1MB2 LINE L1 -4 6167 5785 3862 224 167 73 chr17 16977022 16977984 -72526569 - HAL1 LINE L1 -1208 1299 14 279 0 0 0 chr17 16978085 16978116 -72526437 + (CA)n Simple_repeat Simple_repeat 2 32 0 720 314 95 57 chr17 16978459 16978953 -72525600 - L1ME LINE L1 -1940 4206 3694 1645 175 7 13 chr17 16979069 16979372 -72525181 + AluJo SINE Alu 1 301 -11 2386 63 0 0 chr17 16979436 16979737 -72524816 - AluY SINE Alu -10 301 1 2185 110 0 0 chr17 16980992 16981301 -72523252 - AluY SINE Alu -2 309 1 1437 204 50 23 chr17 16981311 16981654 -72522899 - L1MB3 LINE L1 -2 6181 5830 884 209 0 0 chr17 16982330 16982493 -72522060 + FRAM SINE Alu 1 160 -16 259 247 130 13 chr17 16983486 16983563 -72520990 + L1MB3 LINE L1 5830 5915 -268 275 196 36 0 chr17 16983685 16983741 -72520812 + L1MC/D LINE L1 5690 5747 -2061 557 318 114 4 chr17 16983807 16984043 -72520510 - MIR SINE MIR 0 262 1 731 177 82 0 chr17 16984156 16984303 -72520250 + MER3 DNA MER1_type 1 159 -50 6067 93 21 19 chr17 16984303 16985195 -72519358 - L1PA11 LINE L1 -3 6171 5278 2211 109 0 0 chr17 16985335 16985639 -72518914 + AluSx SINE Alu 1 304 -8 287 317 37 0 chr17 16985700 16985782 -72518771 - MIR3 SINE MIR -48 160 76 581 238 23 57 chr17 16985895 16986086 -72518467 + MER6 DNA MER2_type -52 864 -1 2139 77 0 65 chr17 16987569 16987893 -72516660 + AluY SINE Alu 1 303 -8 570 222 66 100 chr17 16988101 16988506 -72516047 - MLT1H1 LTR MaLR 0 595 1 330 75 0 0 chr17 16988720 16988760 -72515793 + (TA)n Simple_repeat Simple_repeat 2 41 0 2113 104 3 22 chr17 16988760 16989077 -72515476 - AluSq SINE Alu -2 311 1 193 335 6 89 chr17 16989191 16989370 -72515183 - L3 LINE CR1 -768 809 646 21 0 0 0 chr17 16989483 16989504 -72515049 + AT_rich Low_complexity Low_complexity 1 21 0 584 303 112 31 chr17 16989507 16989521 -72515032 - L1MB3 LINE L1 -479 5687 5676 1988 119 0 14 chr17 16989521 16989829 -72514724 + AluSx SINE Alu 1 304 0 584 303 112 31 chr17 16989829 16990307 -72514246 - L1MB3 LINE L1 -490 5676 5237 301 309 117 31 chr17 16990328 16990370 -72514183 - L1MB3 LINE L1 -978 5168 5131 351 0 0 0 chr17 16990370 16990409 -72514144 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 301 309 117 31 chr17 16990409 16990528 -72514025 - L1MB3 LINE L1 -1015 5131 4993 262 381 58 9 chr17 16990536 16990759 -72513794 + L1MEc LINE L1 149 382 -6014 2127 88 3 3 chr17 16990894 16991207 -72513346 + AluSx SINE Alu 1 313 0 1728 142 23 26 chr17 16991589 16991755 -72512798 - AluSx SINE Alu -10 302 137 2014 111 0 41 chr17 16991755 16992070 -72512483 - AluSx SINE Alu -10 302 1 1728 142 23 26 chr17 16992070 16992092 -72512461 - AluSx SINE Alu -175 137 116 1947 122 3 3 chr17 16992092 16992378 -72512175 - AluSq SINE Alu -27 286 1 1728 142 23 26 chr17 16992378 16992491 -72512062 - AluSx SINE Alu -196 116 1 249 108 0 0 chr17 16992541 16992578 -72511975 + (T)n Simple_repeat Simple_repeat 1 37 0 363 136 0 0 chr17 16993378 16993437 -72511116 + (TTCC)n Simple_repeat Simple_repeat 4 62 0 361 211 40 0 chr17 16993613 16993689 -72510864 - MER103 DNA DNA -60 106 28 853 231 61 5 chr17 16993748 16993960 -72510593 - MER58A DNA MER1_type 0 224 1 363 314 116 6 chr17 16994504 16994676 -72509877 - L2 LINE L2 -730 2584 2394 1697 172 28 81 chr17 16994790 16995220 -72509333 - MLT2D LTR ERVL -7 407 1 425 268 53 75 chr17 16995302 16995455 -72509098 - L2 LINE L2 -941 2373 2227 806 184 95 16 chr17 16995455 16995645 -72508908 + MER3 DNA MER1_type 5 209 0 425 268 53 75 chr17 16995645 16995756 -72508797 - L2 LINE L2 -1087 2227 2115 315 310 66 88 chr17 16995757 16996031 -72508522 + L1MEc LINE L1 346 613 -5592 648 230 82 61 chr17 16996104 16996482 -72508071 + L1MEc LINE L1 786 1171 -5034 378 301 121 35 chr17 16996529 16996811 -72507742 - MLT1L LTR MaLR -109 506 201 519 229 59 36 chr17 16996929 16997190 -72507363 + L1MEc LINE L1 1162 1458 -4863 1696 179 0 0 chr17 16997196 16997493 -72507060 + AluJo SINE Alu 1 297 -15 371 304 41 3 chr17 16997513 16997719 -72506834 + L1ME LINE L1 5286 5495 -656 892 129 7 0 chr17 16998193 16998340 -72506213 - AluSg/q SINE Alu -1 312 165 1366 85 0 0 chr17 16998400 16998577 -72505976 - AluSg SINE Alu -133 177 1 2136 113 0 3 chr17 16998858 16999158 -72505395 + AluSx SINE Alu 1 299 -13 4696 107 7 34 chr17 16999346 16999737 -72504816 - L1PA16 LINE L1 0 6166 5766 2172 112 0 0 chr17 16999737 17000041 -72504512 - AluSc SINE Alu -5 304 1 4696 107 7 34 chr17 17000041 17000350 -72504203 - L1PA16 LINE L1 -400 5766 5484 1649 174 16 22 chr17 17000350 17000661 -72503892 - AluJo SINE Alu -3 309 1 4696 107 7 34 chr17 17000661 17000698 -72503855 - L1PA16 LINE L1 -682 5484 5448 2282 90 7 0 chr17 17001095 17001396 -72503157 + AluSp SINE Alu 1 303 -10 294 292 343 11 chr17 17001434 17001612 -72502941 - MIR SINE MIR -11 251 15 2079 136 30 66 chr17 17001774 17002131 -72502422 - L1MB3 LINE L1 -2 6181 5841 1828 95 58 4 chr17 17002131 17002405 -72502148 - AluSx SINE Alu -17 295 7 2079 136 30 66 chr17 17002405 17002487 -72502066 - L1MB3 LINE L1 -342 5841 5758 341 307 48 12 chr17 17002819 17002985 -72501568 + L1ME3A LINE L1 5995 6166 -4 5790 218 56 49 chr17 17003681 17004075 -72500478 - L1MC/D LINE L1 -745 5401 5011 809 153 0 0 chr17 17004075 17004193 -72500360 - FLAM_C SINE Alu -15 118 1 5790 218 56 49 chr17 17004193 17004305 -72500248 - L1MC/D LINE L1 -1135 5011 4901 1926 71 60 7 chr17 17004305 17004587 -72499966 - AluY SINE Alu -10 301 5 5790 218 56 49 chr17 17004587 17005287 -72499266 - L1MC/D LINE L1 -1245 4901 4207 1730 133 4 7 chr17 17005287 17005558 -72498995 - AluSc SINE Alu -2 307 38 5790 218 56 49 chr17 17005558 17005579 -72498974 - L1MC/D LINE L1 -1939 4207 4188 2088 117 0 0 chr17 17005579 17005869 -72498684 - AluSg SINE Alu -20 290 1 5790 218 56 49 chr17 17005869 17006672 -72497881 - L1MC/D LINE L1 -1958 4188 3491 853 163 36 60 chr17 17007999 17008165 -72496388 - AluJb SINE Alu -12 300 139 627 225 25 50 chr17 17008956 17009142 -72495411 + FRAM SINE Alu 1 179 0 1369 95 77 45 chr17 17010138 17010218 -72494335 - MER30 DNA MER1_type 0 230 154 2059 115 0 3 chr17 17010218 17010514 -72494039 - AluSx SINE Alu -17 295 1 1369 95 77 45 chr17 17010514 17010654 -72493899 - MER30 DNA MER1_type -76 154 3 395 275 96 42 chr17 17010822 17010989 -72493564 + MER5B DNA MER1_type 2 177 -1 1690 152 0 48 chr17 17011701 17011846 -72492707 + AluJo SINE Alu 5 129 -183 2103 116 0 7 chr17 17011846 17012148 -72492405 + AluSx SINE Alu 1 300 -12 1690 152 0 48 chr17 17012148 17012311 -72492242 + AluJo SINE Alu 129 298 -14 203 321 0 0 chr17 17012597 17012653 -72491900 + (CA)n Simple_repeat Simple_repeat 1 56 0 1434 194 7 27 chr17 17014126 17014420 -72490133 - AluJo SINE Alu -24 288 1 2354 179 28 26 chr17 17014881 17015385 -72489168 - MLT1D LTR MaLR 0 505 1 1251 205 49 43 chr17 17015461 17015874 -72488679 - MLT2B1 LTR ERVL 0 414 1 1665 203 81 47 chr17 17016246 17016690 -72487863 - LTR2B LTR ERV1 0 490 32 605 282 0 0 chr17 17016748 17016879 -72487674 - MIR SINE MIR -119 143 13 1298 159 68 4 chr17 17016954 17017218 -72487335 + AluJo SINE Alu 1 281 -31 817 220 134 24 chr17 17017933 17018224 -72486329 - MLT1A1 LTR MaLR -33 332 10 679 179 36 77 chr17 17018328 17018388 -72486165 - MER53 DNA DNA -2 187 126 2085 101 10 0 chr17 17018388 17018686 -72485867 - AluSg SINE Alu -9 301 1 679 179 36 77 chr17 17018686 17018793 -72485760 - MER53 DNA DNA -63 126 27 240 244 41 89 chr17 17019413 17019536 -72485017 + L2 LINE L2 3100 3216 -56 32 0 0 0 chr17 17019755 17019787 -72484766 + AT_rich Low_complexity Low_complexity 1 32 0 1645 140 4 8 chr17 17020034 17020299 -72484254 + L1PB4 LINE L1 5893 6156 0 2282 87 0 3 chr17 17020358 17020657 -72483896 + AluSc SINE Alu 1 298 -11 695 273 56 36 chr17 17021548 17021797 -72482756 - MLT1J LTR MaLR -1 510 257 367 188 129 79 chr17 17021806 17021908 -72482645 - MLT1J LTR MaLR -239 202 65 1640 258 80 52 chr17 17022108 17022396 -72482157 - L1MC4a LINE L1 -1786 6022 5743 600 242 15 0 chr17 17022396 17022528 -72482025 + MER94 DNA DNA 1 134 0 1640 258 80 52 chr17 17022528 17022928 -72481625 - L1MC4a LINE L1 -2065 5743 5315 2140 88 0 80 chr17 17022930 17023269 -72481284 - AluSx SINE Alu 0 312 1 183 42 0 0 chr17 17023274 17023298 -72481255 + (TC)n Simple_repeat Simple_repeat 2 25 0 2305 70 0 7 chr17 17023327 17023625 -72480928 - AluY SINE Alu -15 296 1 1983 133 0 19 chr17 17023779 17024132 -72480421 - AluSq SINE Alu 0 313 1 1808 94 0 38 chr17 17024405 17024672 -72479881 + AluY SINE Alu 37 293 -18 1224 189 76 43 chr17 17024774 17024962 -72479591 - AluJo SINE Alu 0 312 109 2245 95 0 0 chr17 17024962 17025258 -72479295 - AluSx SINE Alu -16 296 1 1224 189 76 43 chr17 17025258 17025371 -72479182 - AluJo SINE Alu -203 109 1 1814 107 0 11 chr17 17025641 17025902 -72478651 + AluSg1 SINE Alu 32 289 -20 275 211 34 6 chr17 17026083 17026154 -72478399 + L1MC/D LINE L1 5679 5749 -421 557 318 114 4 chr17 17026220 17026456 -72478097 - MIR SINE MIR 0 262 1 731 177 82 0 chr17 17026569 17026716 -72477837 + MER3 DNA MER1_type 1 159 -50 6043 94 21 19 chr17 17026716 17027607 -72476946 - L1PA11 LINE L1 -4 6170 5278 2211 109 0 0 chr17 17027747 17028051 -72476502 + AluSx SINE Alu 1 304 -8 287 317 37 0 chr17 17028112 17028194 -72476359 - MIR3 SINE MIR -48 160 76 581 238 23 57 chr17 17028307 17028498 -72476055 + MER6 DNA MER2_type -52 864 -1 405 0 0 0 chr17 17028559 17028604 -72475949 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 271 377 58 9 chr17 17028731 17028954 -72475599 + L1MEc LINE L1 149 382 -6014 2127 88 3 3 chr17 17029089 17029400 -72475153 + AluSx SINE Alu 1 311 0 1720 145 23 26 chr17 17029766 17029933 -72474620 - AluSx SINE Alu -9 303 137 2057 105 0 38 chr17 17029933 17030247 -72474306 - AluSx SINE Alu -10 302 1 1720 145 23 26 chr17 17030247 17030269 -72474284 - AluSx SINE Alu -175 137 116 1945 122 3 3 chr17 17030269 17030555 -72473998 - AluSq SINE Alu -27 286 1 1720 145 23 26 chr17 17030555 17030668 -72473885 - AluSx SINE Alu -196 116 1 225 94 0 0 chr17 17030718 17030750 -72473803 + (T)n Simple_repeat Simple_repeat 1 32 0 399 127 0 0 chr17 17031550 17031613 -72472940 + (TTCC)n Simple_repeat Simple_repeat 4 66 0 361 211 40 0 chr17 17031789 17031865 -72472688 - MER103 DNA DNA -60 106 28 853 231 61 5 chr17 17031924 17032136 -72472417 - MER58A DNA MER1_type 0 224 1 363 314 116 6 chr17 17032679 17032851 -72471702 - L2 LINE L2 -730 2584 2394 1723 170 28 81 chr17 17032965 17033395 -72471158 - MLT2D LTR ERVL -7 407 1 425 268 53 75 chr17 17033477 17033630 -72470923 - L2 LINE L2 -941 2373 2227 806 184 95 16 chr17 17033630 17033820 -72470733 + MER3 DNA MER1_type 5 209 0 425 268 53 75 chr17 17033820 17033931 -72470622 - L2 LINE L2 -1087 2227 2115 315 310 66 88 chr17 17033932 17034206 -72470347 + L1MEc LINE L1 346 613 -5592 636 233 82 61 chr17 17034279 17034657 -72469896 + L1MEc LINE L1 786 1171 -5034 378 301 121 35 chr17 17034704 17034986 -72469567 - MLT1L LTR MaLR -109 506 201 548 225 59 36 chr17 17035104 17035365 -72469188 + L1MEc LINE L1 1162 1458 -4863 1711 175 0 0 chr17 17035371 17035668 -72468885 + AluJo SINE Alu 1 297 -15 374 305 42 3 chr17 17035691 17035895 -72468658 + L1ME LINE L1 5289 5497 -683 892 129 7 0 chr17 17036368 17036515 -72468038 - AluSg/q SINE Alu -1 312 165 1361 85 0 0 chr17 17036573 17036750 -72467803 - AluSg SINE Alu -133 177 1 2192 110 0 0 chr17 17037031 17037330 -72467223 + AluSx SINE Alu 1 299 -13 4696 107 7 34 chr17 17037518 17037909 -72466644 - L1PA16 LINE L1 0 6166 5766 2172 112 0 0 chr17 17037909 17038213 -72466340 - AluSc SINE Alu -5 304 1 4696 107 7 34 chr17 17038213 17038522 -72466031 - L1PA16 LINE L1 -400 5766 5484 1616 180 16 22 chr17 17038522 17038833 -72465720 - AluJo SINE Alu -3 309 1 4696 107 7 34 chr17 17038833 17038870 -72465683 - L1PA16 LINE L1 -682 5484 5448 2252 93 7 0 chr17 17039267 17039568 -72464985 + AluSp SINE Alu 1 303 -10 294 292 343 11 chr17 17039606 17039784 -72464769 - MIR SINE MIR -11 251 15 2088 132 32 64 chr17 17039946 17040301 -72464252 - L1MB3 LINE L1 -2 6181 5841 1772 102 58 4 chr17 17040301 17040575 -72463978 - AluSx SINE Alu -17 295 7 2088 132 32 64 chr17 17040575 17040657 -72463896 - L1MB3 LINE L1 -342 5841 5758 341 307 48 12 chr17 17040989 17041155 -72463398 + L1ME3A LINE L1 5995 6166 -4 5971 218 55 43 chr17 17041851 17042236 -72462317 - L1MC/D LINE L1 -745 5401 5022 809 153 0 0 chr17 17042236 17042354 -72462199 - FLAM_C SINE Alu -15 118 1 5971 218 55 43 chr17 17042354 17042466 -72462087 - L1MC/D LINE L1 -1124 5022 4913 2071 64 60 0 chr17 17042466 17042748 -72461805 - AluY SINE Alu -12 299 1 5971 218 55 43 chr17 17042748 17043444 -72461109 - L1MC/D LINE L1 -1233 4913 4227 1730 133 4 7 chr17 17043444 17043715 -72460838 - AluSc SINE Alu -2 307 38 5971 218 55 43 chr17 17043715 17043736 -72460817 - L1MC/D LINE L1 -1919 4227 4208 2061 121 0 0 chr17 17043736 17044026 -72460527 - AluSg SINE Alu -20 290 1 5971 218 55 43 chr17 17044026 17044829 -72459724 - L1MC/D LINE L1 -1938 4208 3491 853 163 36 60 chr17 17046157 17046323 -72458230 - AluJb SINE Alu -12 300 139 617 226 25 50 chr17 17047115 17047300 -72457253 + FRAM SINE Alu 1 178 0 1369 95 77 45 chr17 17048299 17048379 -72456174 - MER30 DNA MER1_type 0 230 154 2059 115 0 3 chr17 17048379 17048675 -72455878 - AluSx SINE Alu -17 295 1 1369 95 77 45 chr17 17048675 17048815 -72455738 - MER30 DNA MER1_type -76 154 3 395 275 96 42 chr17 17048983 17049150 -72455403 + MER5B DNA MER1_type 2 177 -1 1699 152 0 48 chr17 17049862 17050007 -72454546 + AluJo SINE Alu 5 129 -183 2103 116 0 7 chr17 17050007 17050309 -72454244 + AluSx SINE Alu 1 300 -12 1699 152 0 48 chr17 17050309 17050473 -72454080 + AluJo SINE Alu 129 299 -13 203 321 0 0 chr17 17050759 17050815 -72453738 + (CA)n Simple_repeat Simple_repeat 1 56 0 1434 194 7 27 chr17 17052289 17052583 -72451970 - AluJo SINE Alu -24 288 1 2368 177 28 26 chr17 17053044 17053548 -72451005 - MLT1D LTR MaLR 0 505 1 1267 201 49 43 chr17 17053624 17054037 -72450516 - MLT2B1 LTR ERVL 0 414 1 1667 203 81 47 chr17 17054409 17054853 -72449700 - LTR2B LTR ERV1 0 490 32 605 282 0 0 chr17 17054911 17055042 -72449511 - MIR SINE MIR -119 143 13 1298 159 68 4 chr17 17055117 17055381 -72449172 + AluJo SINE Alu 1 281 -31 817 220 134 24 chr17 17056094 17056385 -72448168 - MLT1A1 LTR MaLR -33 332 10 679 179 36 77 chr17 17056489 17056549 -72448004 - MER53 DNA DNA -2 187 126 2085 101 10 0 chr17 17056549 17056847 -72447706 - AluSg SINE Alu -9 301 1 679 179 36 77 chr17 17056847 17056954 -72447599 - MER53 DNA DNA -63 126 27 240 244 41 89 chr17 17057574 17057697 -72446856 + L2 LINE L2 3100 3216 -56 31 0 0 0 chr17 17057917 17057948 -72446605 + AT_rich Low_complexity Low_complexity 1 31 0 1645 140 4 8 chr17 17058195 17058460 -72446093 + L1PB4 LINE L1 5893 6156 0 2317 87 0 0 chr17 17058519 17058817 -72445736 + AluSc SINE Alu 1 298 -11 674 277 56 36 chr17 17059711 17059960 -72444593 - MLT1J LTR MaLR -1 510 257 367 188 129 79 chr17 17059969 17060071 -72444482 - MLT1J LTR MaLR -239 202 65 1629 258 80 52 chr17 17060271 17060559 -72443994 - L1MC4a LINE L1 -1786 6022 5743 600 242 15 0 chr17 17060559 17060691 -72443862 + MER94 DNA DNA 1 134 0 1629 258 80 52 chr17 17060691 17061091 -72443462 - L1MC4a LINE L1 -2065 5743 5315 2127 96 0 63 chr17 17061093 17061426 -72443127 - AluSx SINE Alu 0 312 1 183 42 0 0 chr17 17061431 17061455 -72443098 + (TC)n Simple_repeat Simple_repeat 2 25 0 2305 70 0 7 chr17 17061482 17061780 -72442773 - AluY SINE Alu -15 296 1 1983 133 0 19 chr17 17061934 17062287 -72442266 - AluSq SINE Alu 0 313 1 414 304 21 75 chr17 17062511 17062560 -72441993 - HAL1 LINE L1 -4 2503 2453 1864 90 0 34 chr17 17062560 17062826 -72441727 + AluY SINE Alu 37 293 -18 414 304 21 75 chr17 17062826 17062922 -72441631 - HAL1 LINE L1 -54 2453 2373 1361 176 76 40 chr17 17062922 17063109 -72441444 - AluJo SINE Alu 0 312 108 2244 95 0 0 chr17 17063109 17063405 -72441148 - AluSx SINE Alu -16 296 1 1361 176 76 40 chr17 17063405 17063518 -72441035 - AluJo SINE Alu -204 108 1 414 304 21 75 chr17 17063518 17063611 -72440942 - HAL1 LINE L1 -134 2373 2277 1775 115 0 11 chr17 17063788 17064049 -72440504 + AluSg1 SINE Alu 32 289 -20 1002 267 107 78 chr17 17064261 17064796 -72439757 - L2 LINE L2 -32 3281 2763 1478 176 8 8 chr17 17064796 17065057 -72439496 + AluJo SINE Alu 39 299 -13 1002 267 107 78 chr17 17065057 17065134 -72439419 - L2 LINE L2 -550 2763 2690 2286 84 0 16 chr17 17065134 17065271 -72439282 + AluSq SINE Alu 1 139 -174 2142 101 0 3 chr17 17065271 17065567 -72438986 + AluSc SINE Alu 1 295 -14 2286 84 0 16 chr17 17065567 17065738 -72438815 + AluSq SINE Alu 139 304 -9 1002 267 107 78 chr17 17065738 17065818 -72438735 - L2 LINE L2 -623 2690 2560 240 306 14 0 chr17 17065916 17065988 -72438565 - L2 LINE L2 -982 2332 2260 1303 51 80 0 chr17 17066001 17066177 -72438376 - AluY SINE Alu -121 190 1 363 237 253 62 chr17 17066187 17066495 -72438058 - L2 LINE L2 -1312 2002 1636 1189 274 65 40 chr17 17066638 17067269 -72437284 - L2 LINE L2 -2408 906 260 2582 137 20 24 chr17 17067631 17068084 -72436469 + L1MB3 LINE L1 5690 6140 -43 24 0 0 0 chr17 17068282 17068306 -72436247 + AT_rich Low_complexity Low_complexity 1 24 0 1892 152 3 0 chr17 17068356 17068665 -72435888 - AluJb SINE Alu -2 310 1 910 136 0 0 chr17 17069104 17069236 -72435317 + FLAM_C SINE Alu 1 132 -11 245 250 21 73 chr17 17069601 17069697 -72434856 + MIR SINE MIR 45 135 -73 4486 211 49 86 chr17 17069722 17069798 -72434755 - L1M LINE L1 -778 5368 5291 2045 123 13 0 chr17 17069798 17070100 -72434453 - AluSq SINE Alu -7 306 1 4486 211 49 86 chr17 17070100 17070282 -72434271 - L1M LINE L1 -855 5291 5104 2257 92 7 0 chr17 17070282 17070586 -72433967 + AluSg SINE Alu 1 306 -4 4486 211 49 86 chr17 17070586 17071021 -72433532 - L1M LINE L1 -1042 5104 4654 2338 82 0 0 chr17 17071021 17071324 -72433229 - AluY SINE Alu -8 303 1 4486 211 49 86 chr17 17071324 17072291 -72432262 - L1M LINE L1 -1492 4654 3784 2255 120 10 0 chr17 17072292 17072593 -72431960 - AluSg SINE Alu -6 304 1 4313 237 45 66 chr17 17072721 17072870 -72431683 - L1M4c LINE L1 -4265 2394 2243 1990 160 3 3 chr17 17072870 17073176 -72431377 - AluSx SINE Alu -6 306 1 4313 237 45 66 chr17 17073176 17073936 -72430617 - L1M4c LINE L1 -4416 2243 1469 1888 138 37 24 chr17 17073936 17074103 -72430450 - AluSx SINE Alu -12 300 126 198 0 0 0 chr17 17074103 17074125 -72430428 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1888 138 37 24 chr17 17074125 17074253 -72430300 - AluSx SINE Alu -186 126 1 4313 237 45 66 chr17 17074253 17074379 -72430174 - L1M4c LINE L1 -5190 1469 1342 2090 136 7 7 chr17 17074379 17074689 -72429864 - AluSx SINE Alu -2 310 1 4313 237 45 66 chr17 17074689 17074746 -72429807 - L1M4c LINE L1 -5317 1342 1285 1760 180 6 13 chr17 17074746 17075057 -72429496 + AluJo SINE Alu 4 312 0 4313 237 45 66 chr17 17075057 17075632 -72428921 - L1M4c LINE L1 -5374 1285 604 2346 113 7 0 chr17 17075632 17075942 -72428611 - AluSq SINE Alu -1 312 1 4313 237 45 66 chr17 17075942 17076073 -72428480 - L1M4c LINE L1 -6055 604 472 448 238 82 0 chr17 17076133 17076255 -72428298 + FLAM_C SINE Alu 2 133 0 374 78 0 31 chr17 17076255 17076319 -72428234 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 2271 125 0 0 chr17 17076360 17076671 -72427882 - AluY SINE Alu 0 311 1 372 273 40 60 chr17 17076717 17076867 -72427686 - MER20B DNA MER1_type -618 165 19 793 227 76 62 chr17 17076867 17077104 -72427449 - HAL1 LINE L1 -337 2170 1925 2037 131 0 7 chr17 17077104 17077410 -72427143 - AluSg SINE Alu -6 304 1 793 227 76 62 chr17 17077410 17077542 -72427011 - HAL1 LINE L1 -582 1925 1796 2506 71 7 10 chr17 17077647 17077955 -72426598 + AluY SINE Alu 1 307 -4 616 220 71 0 chr17 17078918 17079059 -72425494 + MLT1L LTR MaLR 321 471 -144 395 296 126 0 chr17 17079345 17079480 -72425073 - MIR SINE MIR -90 172 21 1952 163 3 7 chr17 17079515 17079816 -72424737 + AluJo SINE Alu 1 300 -12 209 104 0 62 chr17 17079869 17079917 -72424636 + (TAA)n Simple_repeat Simple_repeat 2 46 0 2173 153 59 2 chr17 17080189 17080594 -72423959 + MSTA LTR MaLR 1 428 0 1793 144 0 33 chr17 17081385 17081690 -72422863 - AluJo SINE Alu -5 307 13 649 190 40 58 chr17 17081700 17081874 -72422679 - L1MB7 LINE L1 -8 6176 6006 213 311 105 39 chr17 17082129 17082415 -72422138 - L2 LINE L2 -782 2532 2228 282 318 100 21 chr17 17084661 17084895 -72419658 - MIR SINE MIR -12 250 1 275 269 43 0 chr17 17085812 17085905 -72418648 + MER5A DNA MER1_type 24 120 -69 225 209 60 30 chr17 17085845 17085912 -72418641 - MER5A DNA MER1_type -47 142 74 * 2474 85 0 0 chr17 17086995 17087290 -72417263 + AluSq SINE Alu 1 295 -18 2114 149 0 0 chr17 17087302 17087598 -72416955 + AluSx SINE Alu 3 298 -14 2162 88 70 0 chr17 17087659 17087944 -72416609 + AluSq SINE Alu 1 305 -8 409 236 57 103 chr17 17088059 17088459 -72416094 + MLT1D LTR MaLR 2 500 -5 209 301 26 44 chr17 17088546 17088659 -72415894 + L2 LINE L2 1856 1966 -1348 299 298 106 7 chr17 17088689 17088840 -72415713 + L2 LINE L2 2649 2814 -500 410 315 136 5 chr17 17090395 17090579 -72413974 - MIR SINE MIR -45 217 10 2486 81 0 0 chr17 17092053 17092348 -72412205 - AluSx SINE Alu -17 295 1 1094 153 0 0 chr17 17092687 17092844 -72411709 + AluJb SINE Alu 134 290 -22 591 268 101 42 chr17 17092845 17093166 -72411387 - HAL1 LINE L1 -873 1634 1286 1140 211 13 4 chr17 17093166 17093403 -72411150 - MER8 DNA MER2_type 0 239 1 591 268 101 42 chr17 17093403 17093458 -72411095 - HAL1 LINE L1 -1221 1286 1236 2144 119 3 28 chr17 17093458 17093777 -72410776 - AluSx SINE Alu -1 311 1 2268 107 0 3 chr17 17093787 17094078 -72410475 - AluSx SINE Alu -11 301 12 2348 100 7 13 chr17 17094660 17094969 -72409584 - AluSq SINE Alu -6 307 1 245 222 162 17 chr17 17095547 17095664 -72408889 - L2 LINE L2 -796 2518 2385 2403 90 7 0 chr17 17096088 17096387 -72408166 - AluSp SINE Alu -12 301 1 204 343 125 21 chr17 17096459 17096786 -72407767 + L2 LINE L2 2617 2977 -337 296 271 0 0 chr17 17097441 17097526 -72407027 - L1MC4 LINE L1 -33 8009 7925 2392 114 0 0 chr17 17097564 17097870 -72406683 - AluSx SINE Alu -6 306 1 396 168 144 104 chr17 17097893 17098066 -72406487 - L1MC4 LINE L1 -302 7740 7561 1417 160 55 0 chr17 17098069 17098288 -72406265 + AluJo SINE Alu 3 233 -79 291 130 37 0 chr17 17098288 17098342 -72406211 - MADE1 DNA Mariner -1 79 24 2942 3 0 0 chr17 17098342 17098649 -72405904 + AluY SINE Alu 1 307 -4 2432 68 0 17 chr17 17098659 17098955 -72405598 + AluY SINE Alu 1 291 -20 2441 77 7 0 chr17 17098957 17099254 -72405299 + AluY SINE Alu 3 301 -10 399 203 0 0 chr17 17099294 17099363 -72405190 + AluJ/FRAM SINE Alu 232 300 -2 2139 196 184 55 chr17 17099363 17099645 -72404908 - L1MC4 LINE L1 -472 7570 7326 2095 157 10 55 chr17 17099645 17100060 -72404493 - MSTD LTR MaLR 0 396 1 2139 196 184 55 chr17 17100060 17100090 -72404463 - L1MC4 LINE L1 -716 7326 7301 2238 103 0 0 chr17 17100090 17100421 -72404132 + AluSx SINE Alu 1 331 0 2139 196 184 55 chr17 17100421 17100588 -72403965 - L1MC4 LINE L1 -741 7301 7157 2144 110 50 3 chr17 17100588 17100887 -72403666 - AluSq SINE Alu 0 313 1 2139 196 184 55 chr17 17100887 17101171 -72403382 - L1MC4 LINE L1 -885 7157 6705 1180 202 49 2 chr17 17101178 17101456 -72403097 + L1MC4 LINE L1 7049 7368 -674 376 216 31 74 chr17 17102288 17102394 -72402159 - L1M4 LINE L1 -2555 3591 3493 2394 86 0 26 chr17 17102394 17102707 -72401846 + AluSq SINE Alu 1 305 -8 376 216 31 74 chr17 17102707 17102762 -72401791 - L1M4 LINE L1 -2653 3493 3437 2506 60 3 0 chr17 17102849 17103147 -72401406 + AluY SINE Alu 1 299 -12 209 279 183 10 chr17 17103382 17103486 -72401067 - L2 LINE L2 -14 3258 3137 2307 97 7 13 chr17 17105301 17105600 -72398953 - AluSx SINE Alu -15 297 1 377 112 2 0 chr17 17105688 17105753 -72398800 + Alu SINE Alu 244 301 0 1321 218 92 30 chr17 17105754 17106253 -72398300 - MER39 LTR ERV1 -195 512 24 1020 184 153 0 chr17 17106257 17106453 -72398100 - MER8 DNA MER2_type 0 239 14 259 339 107 8 chr17 17106733 17106854 -72397699 + MIR SINE MIR 34 166 -96 2207 102 3 13 chr17 17107238 17107551 -72397002 + AluY SINE Alu 1 310 -1 626 314 163 6 chr17 17107615 17107959 -72396594 + L2 LINE L2 2358 2755 -559 198 267 307 0 chr17 17108211 17108286 -72396267 + L2 LINE L2 3137 3234 -38 195 214 54 36 chr17 17108670 17108726 -72395827 + MIR3 SINE MIR 125 181 -27 1040 285 88 35 chr17 17108726 17109179 -72395374 - MLT1L LTR MaLR -18 597 121 2240 122 0 10 chr17 17109699 17110002 -72394551 - AluSx SINE Alu -12 300 1 385 255 49 0 chr17 17110013 17110115 -72394438 - L2 LINE L2 -22 3291 3185 1518 139 0 34 chr17 17110818 17111055 -72393498 - AluJb SINE Alu -8 304 76 390 260 169 45 chr17 17111280 17111522 -72393031 + L2 LINE L2 2990 3261 -52 1674 112 146 3 chr17 17111522 17111817 -72392736 + MER1B DNA MER1_type 1 337 0 546 160 50 57 chr17 17111887 17111966 -72392587 - MER6 DNA MER2_type -22 843 765 2222 145 9 52 chr17 17111966 17112387 -72392166 - MER57A LTR ERV1 0 403 1 546 160 50 57 chr17 17112387 17112466 -72392087 - MER6 DNA MER2_type -100 765 -63 2169 116 33 3 chr17 17113864 17114165 -72390388 + AluSg SINE Alu 1 310 0 390 21 0 0 chr17 17114168 17114215 -72390338 + (TA)n Simple_repeat Simple_repeat 1 47 0 422 298 233 25 chr17 17114805 17115449 -72389104 - L3 LINE CR1 -39 1538 761 2418 76 0 17 chr17 17115487 17115789 -72388764 + AluY SINE Alu 1 297 -14 2228 123 7 0 chr17 17116385 17116685 -72387868 + AluSx SINE Alu 1 302 -10 181 276 13 53 chr17 17116904 17116980 -72387573 - MIR SINE MIR -38 224 152 22 0 0 0 chr17 17117017 17117039 -72387514 + AT_rich Low_complexity Low_complexity 1 22 0 6797 64 5 93 chr17 17117039 17118103 -72386450 - SVA Other Other 0 1386 433 674 40 0 10 chr17 17118120 17118221 -72386332 - SVA Other Other -520 866 767 1726 151 22 59 chr17 17119695 17120019 -72384534 + AluJb SINE Alu 1 312 0 1818 182 3 7 chr17 17120715 17121022 -72383531 - AluJo SINE Alu -6 306 1 2454 102 0 0 chr17 17121134 17121438 -72383115 + AluSg SINE Alu 1 304 -6 2177 133 0 0 chr17 17121663 17121956 -72382597 - AluSx SINE Alu -19 293 1 756 264 41 15 chr17 17122743 17123055 -72381498 + MLT1I LTR MaLR 63 409 0 2260 114 3 0 chr17 17123092 17123391 -72381162 + AluSx SINE Alu 1 300 -12 2209 96 7 0 chr17 17124100 17124413 -72380140 - AluSq SINE Alu 0 315 1 2276 121 25 74 chr17 17124456 17124548 -72380005 + L1MA8 LINE L1 5863 5958 -333 952 132 0 22 chr17 17124548 17124684 -72379869 + FLAM_C SINE Alu 1 133 0 2276 121 25 74 chr17 17124684 17124851 -72379702 + L1MA8 LINE L1 5958 6093 -198 870 146 8 15 chr17 17124851 17124981 -72379572 + FLAM_C SINE Alu 4 132 -1 2276 121 25 74 chr17 17124981 17125165 -72379388 + L1MA8 LINE L1 6093 6285 -6 24 0 0 0 chr17 17125166 17125190 -72379363 + AT_rich Low_complexity Low_complexity 1 24 0 31 20 0 20 chr17 17125663 17125691 -72378862 + AT_rich Low_complexity Low_complexity 1 29 -19 2303 90 3 0 chr17 17125691 17125979 -72378574 - AluSp SINE Alu -24 289 1 31 20 0 20 chr17 17125979 17125999 -72378554 + AT_rich Low_complexity Low_complexity 29 48 0 182 233 17 0 chr17 17126147 17126207 -72378346 + (CATATA)n Simple_repeat Simple_repeat 6 66 0 335 228 104 150 chr17 17126248 17126605 -72377948 - L1MB8 LINE L1 -222 5944 5572 942 154 0 0 chr17 17126605 17126735 -72377818 + FLAM_C SINE Alu 4 133 0 335 228 104 150 chr17 17126735 17126806 -72377747 - L1MB8 LINE L1 -594 5572 5542 2280 97 7 3 chr17 17126806 17127114 -72377439 + AluSx SINE Alu 1 309 -3 335 228 104 150 chr17 17127114 17127205 -72377348 - L1MB8 LINE L1 -624 5542 5448 349 236 48 122 chr17 17127229 17127391 -72377162 + L1ME4a LINE L1 5803 5975 -146 2010 128 3 3 chr17 17127391 17127687 -72376866 - AluSx SINE Alu -16 296 1 1358 183 90 24 chr17 17127687 17127977 -72376576 - AluJo SINE Alu -3 309 1 349 236 48 122 chr17 17127977 17128008 -72376545 + L1ME4a LINE L1 5974 6006 -115 2466 74 0 0 chr17 17128008 17128307 -72376246 + AluY SINE Alu 1 299 -12 349 236 48 122 chr17 17128307 17128382 -72376171 + L1ME4a LINE L1 6006 6053 -68 990 130 0 0 chr17 17128407 17128570 -72375983 - AluSg/x SINE Alu 0 308 146 320 122 0 14 chr17 17128570 17128633 -72375920 - Alu SINE Alu -257 44 1 1036 151 235 8 chr17 17128952 17129190 -72375363 + AluSg1 SINE Alu 1 292 -17 561 234 52 75 chr17 17129191 17129498 -72375055 - L1ME4a LINE L1 -224 5897 5598 21 36 0 0 chr17 17129732 17129760 -72374793 + AT_rich Low_complexity Low_complexity 1 28 0 729 143 29 0 chr17 17129857 17129962 -72374591 - FRAM SINE Alu -17 159 52 2314 81 0 3 chr17 17129968 17130296 -72374257 - AluSx SINE Alu 0 327 1 2272 110 3 0 chr17 17130509 17130808 -72373745 - AluSp SINE Alu -13 300 1 1945 151 10 10 chr17 17130943 17131247 -72373306 - AluSx SINE Alu -8 304 1 809 153 0 16 chr17 17131269 17131393 -72373160 - FLAM_C SINE Alu -19 124 3 2186 106 0 3 chr17 17131406 17131735 -72372818 - AluSc SINE Alu 0 328 1 3042 217 123 119 chr17 17131948 17132018 -72372535 + HAL1 LINE L1 15 83 -2424 2136 128 0 13 chr17 17132018 17132322 -72372231 - AluSx SINE Alu -12 300 1 3042 217 123 119 chr17 17132322 17133234 -72371319 + HAL1 LINE L1 83 1149 -1358 757 160 0 90 chr17 17133234 17133340 -72371213 + FLAM_A SINE Alu 12 103 -208 2369 79 21 0 chr17 17133340 17133630 -72370923 - AluSp SINE Alu -16 297 2 757 160 0 90 chr17 17133630 17133667 -72370886 + FLAM_A SINE Alu 103 142 -169 3042 217 123 119 chr17 17133667 17134164 -72370389 + HAL1 LINE L1 1149 1643 -864 1523 81 27 27 chr17 17134178 17134399 -72370154 + AluSp SINE Alu 86 306 -7 435 156 9 4 chr17 17134434 17134650 -72369903 + AluJo SINE Alu 1 299 -13 1254 265 80 51 chr17 17134650 17134724 -72369829 + HAL1 LINE L1 1653 1723 -784 1508 136 0 0 chr17 17134724 17134937 -72369616 + AluJb SINE Alu 87 299 -13 1727 164 27 17 chr17 17134946 17135239 -72369314 + AluJo SINE Alu 1 296 -16 1254 265 80 51 chr17 17135239 17135702 -72368851 + HAL1 LINE L1 1730 2216 -291 2217 105 3 0 chr17 17135890 17136184 -72368369 + AluSg SINE Alu 1 295 -15 2509 63 0 3 chr17 17136825 17137125 -72367428 - AluSq SINE Alu -14 299 1 314 296 122 83 chr17 17137739 17138435 -72366118 - L1M2 LINE L1 -5471 1378 656 907 310 114 41 chr17 17138727 17139573 -72364980 + L2 LINE L2 2148 3053 -219 497 237 65 7 chr17 17139669 17139808 -72364745 - MLT1J LTR MaLR -250 261 115 252 224 0 0 chr17 17139829 17139878 -72364675 + L2 LINE L2 3220 3268 -4 2130 128 7 0 chr17 17140242 17140546 -72364007 - AluSx SINE Alu -6 306 1 468 241 194 61 chr17 17140957 17141302 -72363251 - MLT1J LTR MaLR 0 511 121 1171 177 40 0 chr17 17141328 17141492 -72363061 - AluJb SINE Alu -20 292 117 297 0 0 0 chr17 17141492 17141525 -72363028 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1171 177 40 0 chr17 17141525 17141558 -72362995 - AluJb SINE Alu -195 117 87 258 263 0 53 chr17 17141558 17141634 -72362919 - MLT1J LTR MaLR -439 72 1 2380 105 0 0 chr17 17144197 17144510 -72360043 + AluSq SINE Alu 1 313 0 238 302 16 0 chr17 17145159 17145222 -72359331 - L2 LINE L2 -17 3296 3233 1805 269 169 15 chr17 17145239 17145264 -72359289 + L2 LINE L2 1818 1838 -1476 2894 191 109 44 chr17 17145264 17145951 -72358602 - MER44D DNA MER2_type -1 604 1 1805 269 169 15 chr17 17145951 17146605 -72357948 + L2 LINE L2 1838 2602 -712 902 306 75 47 chr17 17146599 17147168 -72357385 + L2 LINE L2 2731 3312 -1 * 332 251 167 26 chr17 17147870 17148097 -72356456 + L1ME4a LINE L1 5822 6080 -41 2486 80 0 10 chr17 17148230 17148541 -72356012 - AluSc SINE Alu -1 308 1 2299 76 7 0 chr17 17148552 17148841 -72355712 - AluY SINE Alu -20 291 1 425 194 121 16 chr17 17148842 17148966 -72355587 - HAL1 LINE L1 -123 2384 2248 292 235 103 37 chr17 17148980 17149116 -72355437 - HAL1 LINE L1 -356 2151 2007 2106 107 27 0 chr17 17149242 17149542 -72355011 - AluSx SINE Alu -4 308 1 375 271 42 8 chr17 17149667 17149785 -72354768 - L1ME LINE L1 -460 5644 5523 471 264 126 6 chr17 17149786 17149960 -72354593 + MIR SINE MIR 63 257 -5 1571 162 41 4 chr17 17150276 17150547 -72354006 + AluSx SINE Alu 1 281 -31 2018 78 4 0 chr17 17150662 17150907 -72353646 - AluSp SINE Alu -67 246 1 1815 157 14 3 chr17 17150990 17151277 -72353276 + AluJo SINE Alu 1 290 -22 306 256 154 17 chr17 17151388 17151505 -72353048 - L2 LINE L2 -1 3312 3180 267 250 54 27 chr17 17151827 17151939 -72352614 - L1ME LINE L1 -1487 4642 4528 1132 249 99 26 chr17 17151939 17152365 -72352188 - MLT1L LTR MaLR -6 609 153 975 160 58 11 chr17 17152652 17152840 -72351713 + MER46A DNA MER2_type 40 236 0 695 195 92 0 chr17 17153703 17153848 -72350705 + MIR SINE MIR 33 189 -64 2246 204 99 7 chr17 17154013 17154621 -72349932 - L1ME LINE L1 -2912 3217 2554 2312 108 0 0 chr17 17154622 17154927 -72349626 - AluSx SINE Alu -7 305 1 1074 90 0 0 chr17 17154930 17155063 -72349490 - AluSq/x SINE Alu -179 133 1 1421 73 0 0 chr17 17155363 17155540 -72349013 + AluY SINE Alu 127 303 -8 2322 95 0 3 chr17 17155547 17155851 -72348702 + AluSq SINE Alu 1 303 -10 1934 167 0 3 chr17 17156566 17156877 -72347676 - AluJb SINE Alu -2 310 1 2209 112 0 3 chr17 17157121 17157416 -72347137 + AluSx SINE Alu 2 295 -17 325 222 11 11 chr17 17157437 17157527 -72347026 - L1ME3A LINE L1 -230 5940 5851 648 265 169 48 chr17 17157733 17157914 -72346639 - L1ME3A LINE L1 -355 5807 5649 1650 143 0 16 chr17 17157914 17158166 -72346387 + AluSq SINE Alu 1 248 -65 648 265 169 48 chr17 17158166 17158606 -72345947 - L1ME3A LINE L1 -513 5649 5100 1478 173 10 70 chr17 17158756 17159056 -72345497 - AluJo SINE Alu -30 282 1 554 302 108 50 chr17 17159078 17159175 -72345378 - L2 LINE L2 -1 3312 3222 2307 88 7 13 chr17 17159175 17159482 -72345071 + AluSg SINE Alu 1 305 -5 554 302 108 50 chr17 17159482 17159801 -72344752 - L2 LINE L2 -91 3222 2872 296 292 77 31 chr17 17159812 17159942 -72344611 - L1ME LINE L1 -5328 791 656 383 259 170 0 chr17 17160290 17160425 -72344128 - L1ME LINE L1 -5919 200 43 239 214 169 34 chr17 17160754 17160843 -72343710 - L1ME3A LINE L1 -2305 3841 3741 2949 105 28 5 chr17 17161454 17161882 -72342671 + MER75 DNA T2_type 72 509 -5 2482 63 0 31 chr17 17162357 17162674 -72341879 - AluY SINE Alu -4 307 1 194 357 206 0 chr17 17166316 17166442 -72338111 + MER5B DNA MER1_type 7 158 -20 252 0 0 0 chr17 17166888 17166916 -72337637 + (A)n Simple_repeat Simple_repeat 1 28 0 25 0 0 0 chr17 17167240 17167265 -72337288 + AT_rich Low_complexity Low_complexity 1 25 0 3069 114 33 2 chr17 17168023 17168444 -72336109 - Tigger2a DNA MER2_type 0 434 1 232 266 216 10 chr17 17168745 17168874 -72335679 + MIR SINE MIR 2 155 -53 2324 68 38 0 chr17 17171133 17171425 -72333128 + AluSp SINE Alu 1 303 -10 916 132 0 132 chr17 17171877 17172066 -72332487 - AluSg/x SINE Alu -14 296 133 1543 159 24 64 chr17 17172386 17172681 -72331872 + AluJb SINE Alu 7 289 -23 11180 112 77 6 chr17 17173180 17173597 -72330956 - Tigger1 DNA MER2_type -223 2195 1809 1930 150 6 29 chr17 17173597 17173911 -72330642 - AluJb SINE Alu -5 307 1 11180 112 77 6 chr17 17173911 17175515 -72329038 - Tigger1 DNA MER2_type -609 1809 1 261 157 112 56 chr17 17176199 17176288 -72328265 - HAL1b LINE L1 -256 1092 999 1825 143 4 7 chr17 17176505 17176784 -72327769 - AluJb SINE Alu -11 301 24 2316 81 0 0 chr17 17176855 17177138 -72327415 - AluSc SINE Alu -26 283 1 2209 89 7 10 chr17 17177866 17178159 -72326394 - AluSx SINE Alu -20 292 1 193 237 0 0 chr17 17178418 17178456 -72326097 + L2 LINE L2 3267 3304 -9 334 70 0 0 chr17 17178718 17178769 -72325784 - Alu SINE Alu -8 294 253 662 170 14 71 chr17 17178818 17178959 -72325594 + FLAM_A SINE Alu 1 133 0 2252 112 0 13 chr17 17179471 17179784 -72324769 - AluSq SINE Alu -4 309 1 186 71 0 0 chr17 17179793 17179821 -72324732 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 2247 82 7 0 chr17 17179821 17180103 -72324450 - AluY SINE Alu -27 284 1 184 111 0 0 chr17 17180562 17180589 -72323964 + MER5B DNA MER1_type 21 47 -131 941 318 76 12 chr17 17180805 17181305 -72323248 - L2 LINE L2 -894 2420 1889 2302 104 3 0 chr17 17181957 17182266 -72322287 + AluSx SINE Alu 1 310 -2 857 246 79 4 chr17 17183325 17183553 -72321000 + MIR SINE MIR 18 262 0 2048 141 10 7 chr17 17183568 17183873 -72320680 - AluSx SINE Alu -4 308 3 1624 164 22 7 chr17 17183888 17184162 -72320391 - AluJo SINE Alu -14 298 21 209 138 69 52 chr17 17184409 17184467 -72320086 + L3 LINE CR1 939 997 -580 412 287 170 65 chr17 17184555 17184938 -72319615 + L3 LINE CR1 1135 1557 -20 190 297 9 63 chr17 17186124 17186235 -72318318 + MIR SINE MIR 20 124 -138 280 195 98 65 chr17 17186491 17186614 -72317939 + MIR SINE MIR 130 256 -6 21 36 0 0 chr17 17186709 17186737 -72317816 + AT_rich Low_complexity Low_complexity 1 28 0 2034 96 41 24 chr17 17187655 17187946 -72316607 - AluSx SINE Alu -16 296 1 1408 133 44 121 chr17 17187966 17188281 -72316272 - AluJo SINE Alu -17 295 5 2128 138 0 0 chr17 17188295 17188592 -72315961 - AluSx SINE Alu -15 297 1 273 276 76 21 chr17 17188734 17188879 -72315674 - HAL1 LINE L1 -117 2390 2238 1781 168 3 19 chr17 17188893 17189202 -72315351 - AluJo SINE Alu -2 310 7 307 228 114 81 chr17 17189274 17189397 -72315156 - HAL1b LINE L1 -473 875 749 12387 161 54 19 chr17 17189419 17189703 -72314850 + L1P LINE L1 2825 3098 -3048 2071 100 7 4 chr17 17189703 17190012 -72314541 + AluSp SINE Alu 5 314 0 12387 161 54 19 chr17 17190012 17190081 -72314472 + L1P LINE L1 3098 3163 -2983 2289 67 0 51 chr17 17190081 17190393 -72314160 - AluY SINE Alu -15 296 1 12387 161 54 19 chr17 17190393 17192460 -72312093 + L1P LINE L1 3163 5331 -815 787 190 0 15 chr17 17192460 17192597 -72311956 + AluJb SINE Alu 139 273 -39 6114 83 7 23 chr17 17192603 17192717 -72311836 + L1PA13 LINE L1 5317 5431 -732 2055 147 0 7 chr17 17192717 17193017 -72311536 + AluSx SINE Alu 1 298 -14 6114 83 7 23 chr17 17193017 17193762 -72310791 + L1PA13 LINE L1 5431 6162 -1 616 241 0 38 chr17 17193970 17194128 -72310425 + L1MC5 LINE L1 7756 7907 -54 2083 98 25 35 chr17 17194370 17194685 -72309868 - AluSx SINE Alu 0 312 1 330 206 0 0 chr17 17194917 17194990 -72309563 + (TA)n Simple_repeat Simple_repeat 1 73 0 894 160 0 0 chr17 17195078 17195203 -72309350 - FLAM_C SINE Alu -18 125 1 2421 87 3 10 chr17 17196834 17197146 -72307407 + AluSp SINE Alu 1 310 -3 30 0 0 0 chr17 17201231 17201261 -72303292 + AT_rich Low_complexity Low_complexity 1 30 0 1582 172 7 21 chr17 17201261 17201552 -72303001 - AluJo SINE Alu -25 287 1 302 203 0 14 chr17 17201554 17201623 -72302930 - L1ME LINE L1 -454 5667 5600 229 182 0 0 chr17 17202178 17202222 -72302331 + CT-rich Low_complexity Low_complexity 3 46 0 2123 130 0 9 chr17 17202387 17202702 -72301851 + AluSx SINE Alu 1 312 0 219 121 0 0 chr17 17203464 17203497 -72301056 - L2 LINE L2 -2 3311 3279 1028 233 18 18 chr17 17204223 17204446 -72300107 - MER58A DNA MER1_type 0 224 2 632 209 37 0 chr17 17205774 17205908 -72298645 + L1ME3A LINE L1 6032 6170 0 2191 104 7 13 chr17 17206785 17207084 -72297469 - AluSc SINE Alu -12 297 1 685 115 0 26 chr17 17207093 17207206 -72297347 - L1MB3 LINE L1 0 6183 6074 772 290 45 9 chr17 17207669 17207890 -72296663 - MIR SINE MIR -3 259 31 21 0 0 0 chr17 17208173 17208194 -72296359 + AT_rich Low_complexity Low_complexity 1 21 0 1908 105 4 0 chr17 17208817 17209065 -72295488 + AluSp SINE Alu 1 249 -64 1714 143 15 8 chr17 17209068 17209334 -72295219 + AluJb SINE Alu 1 268 -44 551 122 138 49 chr17 17209737 17209860 -72294693 + L1MB3 LINE L1 6048 6181 -2 23 0 0 0 chr17 17211722 17211745 -72292808 + AT_rich Low_complexity Low_complexity 1 23 0 497 352 72 45 chr17 17211794 17212237 -72292316 - L2 LINE L2 -1 3271 2817 2373 64 0 32 chr17 17212935 17213246 -72291307 - AluY SINE Alu -10 301 1 268 325 83 6 chr17 17213365 17213522 -72291031 - MIR SINE MIR -5 257 89 7352 99 45 26 chr17 17214108 17215177 -72289376 + HSMAR1 DNA Mariner 1 1089 -198 1990 119 7 24 chr17 17215184 17215477 -72289076 + AluSx SINE Alu 1 288 -24 835 171 0 11 chr17 17215515 17215690 -72288863 + G-rich Low_complexity Low_complexity 5 177 0 200 154 77 0 chr17 17215690 17215729 -72288824 + A-rich Low_complexity Low_complexity 4 45 0 1359 100 42 0 chr17 17215729 17215919 -72288634 + HSMAR1 DNA Mariner 1090 1287 0 2471 72 0 0 chr17 17216650 17216943 -72287610 - AluSg SINE Alu -17 293 1 317 229 21 42 chr17 17217070 17217166 -72287387 - MER5A DNA MER1_type -83 106 13 261 299 42 69 chr17 17217166 17217310 -72287243 + MER5A DNA MER1_type 27 166 -23 * 739 252 6 0 chr17 17217185 17217344 -72287209 - MER5A DNA MER1_type -29 160 1 24 53 0 0 chr17 17218397 17218435 -72286118 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr17 17218887 17218909 -72285644 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr17 17218971 17218994 -72285559 + AT_rich Low_complexity Low_complexity 1 23 0 373 182 40 50 chr17 17219144 17219243 -72285310 + L1ME2 LINE L1 2 99 -6443 812 127 0 0 chr17 17219265 17219383 -72285170 - AluSg/x SINE Alu 0 309 192 4990 205 70 42 chr17 17219383 17220502 -72284051 + L1ME2 LINE L1 83 1241 -5301 1421 208 32 23 chr17 17220502 17220810 -72283743 + AluJo SINE Alu 1 311 -1 4990 205 70 42 chr17 17220810 17220916 -72283637 + L1ME2 LINE L1 1241 1343 -5199 482 296 38 13 chr17 17220931 17221090 -72283463 + L1ME2 LINE L1 4455 4617 -2027 1744 87 0 13 chr17 17221095 17221324 -72283229 + AluSc SINE Alu 76 301 -8 650 141 0 0 chr17 17221324 17221410 -72283143 + AluJo/FRAM SINE Alu 163 248 -64 481 220 165 11 chr17 17221452 17221634 -72282919 + L1ME2 LINE L1 4897 5106 -1538 207 100 0 0 chr17 17221996 17222026 -72282527 + (GAAAA)n Simple_repeat Simple_repeat 3 32 0 2918 209 109 18 chr17 17222524 17223893 -72280660 + L1ME2 LINE L1 5121 6607 -55 350 340 77 6 chr17 17226498 17226654 -72277899 - L1M4 LINE L1 -1824 4322 4156 392 201 227 46 chr17 17226723 17226917 -72277636 - MIR SINE MIR -33 229 1 488 256 29 17 chr17 17229372 17229513 -72275040 - MIR SINE MIR -64 144 45 1653 137 30 19 chr17 17230285 17230548 -72274005 + AluSx SINE Alu 9 274 -38 441 0 0 0 chr17 17230717 17230766 -72273787 + (TA)n Simple_repeat Simple_repeat 1 49 0 2159 128 0 16 chr17 17230766 17231072 -72273481 - AluSx SINE Alu -10 302 2 600 274 102 30 chr17 17231073 17231376 -72273177 + L2 LINE L2 2184 2508 -806 1587 153 33 43 chr17 17231973 17232274 -72272279 - AluJo SINE Alu -14 298 1 5336 79 24 60 chr17 17232615 17233505 -72271048 + SVA Other Other 9 866 -520 5700 46 45 25 chr17 17233768 17234504 -72270049 + SVA Other Other 635 1385 -1 1119 152 52 0 chr17 17235028 17235239 -72269314 + L1MB2 LINE L1 5707 5928 -255 526 241 53 23 chr17 17235300 17235433 -72269120 + MER21B LTR ERV1 60 196 -667 370 150 39 127 chr17 17235457 17235567 -72268986 - FLAM_A SINE Alu -27 106 21 2107 204 51 62 chr17 17235568 17236201 -72268352 + MER21B LTR ERV1 184 809 -54 749 199 51 51 chr17 17236218 17236454 -72268099 + L1MB2 LINE L1 5929 6164 -7 567 188 30 0 chr17 17236886 17236987 -72267566 + U6 snRNA snRNA 1 104 -3 372 357 13 9 chr17 17237156 17237411 -72267142 + Charlie8 DNA MER1_type 38 1390 -1027 21 0 0 0 chr17 17238402 17238423 -72266130 + AT_rich Low_complexity Low_complexity 1 21 0 2167 115 7 0 chr17 17238542 17238837 -72265716 + AluSx SINE Alu 2 298 -14 406 184 31 0 chr17 17240355 17240453 -72264100 - MER33 DNA MER1_type 0 324 224 1279 95 0 22 chr17 17240457 17240636 -72263917 - AluSp SINE Alu -9 304 130 810 155 38 66 chr17 17240646 17240781 -72263772 - MER33 DNA MER1_type -2373 212 84 2162 112 0 0 chr17 17240781 17241076 -72263477 - AluSx SINE Alu -17 295 1 810 155 38 66 chr17 17241076 17241153 -72263400 - MER33 DNA MER1_type -2501 84 6 591 315 162 43 chr17 17241267 17241916 -72262637 + L2 LINE L2 2292 3100 -213 1806 121 61 0 chr17 17241916 17242180 -72262373 + AluSp SINE Alu 1 280 -33 591 315 162 43 chr17 17242180 17242414 -72262139 + L2 LINE L2 3100 3305 -8 24 32 0 0 chr17 17242459 17242490 -72262063 + AT_rich Low_complexity Low_complexity 1 31 0 1037 279 118 23 chr17 17242518 17242671 -72261882 - L2 LINE L2 0 3313 3176 1717 170 7 17 chr17 17242671 17242971 -72261582 + AluJo SINE Alu 1 297 -15 1037 279 118 23 chr17 17242971 17243416 -72261137 - L2 LINE L2 -137 3176 2662 1147 178 0 33 chr17 17243418 17243632 -72260921 + AluJo SINE Alu 106 312 0 431 279 32 25 chr17 17243734 17243892 -72260661 - L2 LINE L2 -900 2414 2256 279 0 0 0 chr17 17243903 17243934 -72260619 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2169 106 0 0 chr17 17244000 17244312 -72260241 + AluSq SINE Alu 1 312 0 270 0 0 0 chr17 17245037 17245067 -72259486 + (TA)n Simple_repeat Simple_repeat 2 31 0 2512 48 7 10 chr17 17245067 17245377 -72259176 - AluY SINE Alu -2 309 1 1451 207 35 29 chr17 17245409 17245785 -72258768 + MLT1B LTR MaLR 1 378 -12 221 196 0 0 chr17 17246772 17246818 -72257735 + L2 LINE L2 3268 3313 0 23 68 0 0 chr17 17247415 17247459 -72257094 + AT_rich Low_complexity Low_complexity 1 44 0 436 266 82 88 chr17 17247485 17247839 -72256714 - L1ME4a LINE L1 -79 6042 5691 2299 102 0 0 chr17 17247919 17248214 -72256339 - AluSg1 SINE Alu -14 295 1 1680 180 14 3 chr17 17248269 17248564 -72255989 + AluJb SINE Alu 15 312 0 341 221 0 0 chr17 17249152 17249229 -72255324 - FLAM_A SINE Alu 0 133 57 2144 112 0 31 chr17 17249502 17249824 -72254729 + AluSx SINE Alu 1 312 0 512 243 29 86 chr17 17249824 17250034 -72254519 + MLT2D LTR ERVL 217 414 0 2328 100 0 0 chr17 17250041 17250351 -72254202 - AluY SINE Alu -1 310 1 4364 190 49 65 chr17 17250617 17250679 -72253874 - Charlie1a DNA MER1_type -1312 1449 1388 2263 92 17 0 chr17 17250679 17250971 -72253582 - AluSc SINE Alu -12 297 1 4364 190 49 65 chr17 17250971 17251095 -72253458 - Charlie1a DNA MER1_type -1373 1388 1264 2269 89 0 17 chr17 17251095 17251397 -72253156 - AluY SINE Alu -14 297 1 4364 190 49 65 chr17 17251397 17251793 -72252760 - Charlie1a DNA MER1_type -1497 1264 863 2360 108 0 0 chr17 17251793 17252099 -72252454 + AluSx SINE Alu 1 306 -6 4364 190 49 65 chr17 17252099 17252169 -72252384 - Charlie1a DNA MER1_type -1898 863 793 2284 101 32 61 chr17 17252169 17252544 -72252009 - THE1B LTR MaLR 0 364 1 11609 95 14 0 chr17 17252544 17254102 -72250451 - THE1B-int LTR MaLR 0 1580 2 2248 121 30 28 chr17 17254103 17254466 -72250087 - THE1B LTR MaLR 0 364 1 4364 190 49 65 chr17 17254466 17255234 -72249319 - Charlie1a DNA MER1_type -1966 795 45 180 0 0 0 chr17 17255697 17255717 -72248836 + (A)n Simple_repeat Simple_repeat 1 20 0 2129 116 3 0 chr17 17255723 17256007 -72248546 + AluSx SINE Alu 1 285 -27 218 311 14 0 chr17 17256761 17256835 -72247718 + (TA)n Simple_repeat Simple_repeat 2 76 0 296 252 0 28 chr17 17257062 17257150 -72247403 - MIR SINE MIR -115 93 9 225 0 0 0 chr17 17258168 17258193 -72246360 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 299 327 93 23 chr17 17258324 17258624 -72245929 + L2 LINE L2 2550 2870 -444 444 304 75 60 chr17 17258703 17258969 -72245584 + L1ME1 LINE L1 5550 5819 -302 218 297 40 54 chr17 17259817 17259891 -72244662 + MIR3 SINE MIR 105 177 -31 936 234 63 13 chr17 17260014 17260253 -72244300 + MIR SINE MIR 12 262 0 334 319 143 49 chr17 17260614 17260808 -72243745 + L2 LINE L2 1883 2057 -1257 1700 174 41 10 chr17 17260808 17261101 -72243452 - AluJb SINE Alu -4 308 7 334 319 143 49 chr17 17261101 17261605 -72242948 + L2 LINE L2 2057 2647 -667 1262 203 95 16 chr17 17262421 17262736 -72241817 + L1ME1 LINE L1 5810 6149 -17 2190 122 3 0 chr17 17263264 17263568 -72240985 + AluSx SINE Alu 1 305 -7 2378 83 7 0 chr17 17263605 17263905 -72240648 + AluY SINE Alu 1 302 -9 1814 125 69 10 chr17 17263910 17264213 -72240340 + L1PB4 LINE L1 5834 6154 -2 25 65 0 0 chr17 17264213 17264259 -72240294 + AT_rich Low_complexity Low_complexity 1 46 0 408 200 0 0 chr17 17264270 17264370 -72240183 + CT-rich Low_complexity Low_complexity 2 101 0 1044 170 43 25 chr17 17265059 17265294 -72239259 + MER44D DNA MER2_type 1 509 -100 423 194 0 0 chr17 17265294 17265387 -72239166 + (TATATG)n Simple_repeat Simple_repeat 4 96 0 995 143 11 0 chr17 17265396 17265571 -72238982 + (TATG)n Simple_repeat Simple_repeat 2 178 0 307 292 0 0 chr17 17265571 17265651 -72238902 + L1MC4 LINE L1 6621 6703 -1339 241 315 0 0 chr17 17265671 17265760 -72238793 - L1MC4 LINE L1 -1339 6703 6615 339 300 0 0 chr17 17265791 17265881 -72238672 + L1MC4 LINE L1 6614 6703 -1339 273 197 0 0 chr17 17265882 17265943 -72238610 + (TA)n Simple_repeat Simple_repeat 2 62 0 599 124 11 0 chr17 17265947 17266036 -72238517 + MER44D DNA MER2_type 514 603 -2 830 183 0 14 chr17 17266036 17266178 -72238375 - AluJo/FRAM SINE Alu -16 296 157 465 193 12 0 chr17 17266178 17266261 -72238292 - AluS SINE Alu -228 84 1 232 338 95 65 chr17 17266346 17266746 -72237807 + L2 LINE L2 2856 3267 -5 1994 151 0 22 chr17 17268852 17269169 -72235384 - AluJb SINE Alu 0 312 3 1514 145 6 116 chr17 17269171 17269508 -72235045 - AluJb SINE Alu -2 300 1 298 300 70 45 chr17 17269988 17270190 -72234363 - MIR SINE MIR 0 262 55 342 138 0 38 chr17 17271059 17271139 -72233414 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 2041 167 0 0 chr17 17271139 17271451 -72233102 - AluSx SINE Alu 0 312 1 1640 230 108 38 chr17 17271804 17272325 -72232228 + L2 LINE L2 2235 2791 -523 2507 66 0 0 chr17 17273060 17273365 -72231188 + AluY SINE Alu 1 305 -6 270 291 166 20 chr17 17273602 17273877 -72230676 + L2 LINE L2 1658 2015 -1299 1861 146 0 23 chr17 17274371 17274672 -72229881 - AluJo SINE Alu -16 296 3 2430 74 0 10 chr17 17274707 17275023 -72229530 + AluSc SINE Alu 1 313 0 26 88 0 0 chr17 17275294 17275362 -72229191 + AT_rich Low_complexity Low_complexity 1 68 0 22 35 0 0 chr17 17275633 17275662 -72228891 + AT_rich Low_complexity Low_complexity 1 29 0 752 68 29 10 chr17 17275952 17276055 -72228498 - U6 snRNA snRNA -2 105 1 2157 130 0 0 chr17 17276485 17276786 -72227767 + AluSx SINE Alu 1 301 -11 348 296 70 14 chr17 17276830 17276972 -72227581 - MER5B DNA MER1_type -27 151 2 21 0 0 0 chr17 17277168 17277189 -72227364 + AT_rich Low_complexity Low_complexity 1 21 0 1575 162 6 88 chr17 17278565 17278714 -72225839 + AluJb SINE Alu 2 112 -200 2056 121 0 0 chr17 17278714 17279023 -72225530 + AluSx SINE Alu 1 309 0 1575 162 6 88 chr17 17279023 17279200 -72225353 + AluJb SINE Alu 112 302 -10 378 304 39 0 chr17 17279881 17279983 -72224570 + L2 LINE L2 3204 3309 -4 630 286 65 23 chr17 17279994 17280211 -72224342 + MIR SINE MIR 3 228 -34 21 0 0 0 chr17 17282553 17282574 -72221979 + AT_rich Low_complexity Low_complexity 1 21 0 1297 91 29 38 chr17 17282627 17282837 -72221716 - L1PA13 LINE L1 -4 6159 5952 231 114 57 29 chr17 17282891 17282961 -72221592 + CT-rich Low_complexity Low_complexity 2 73 0 8786 84 21 67 chr17 17283056 17284506 -72220047 + SVA Other Other 3 1386 0 268 181 48 7 chr17 17285174 17285251 -72219302 - L1PA8A LINE L1 -350 5771 5695 2164 99 48 0 chr17 17285311 17285605 -72218948 + AluSg SINE Alu 1 308 -2 2174 103 7 0 chr17 17286005 17286296 -72218257 - AluSp SINE Alu -17 296 4 243 0 0 0 chr17 17286846 17286873 -72217680 + (A)n Simple_repeat Simple_repeat 1 27 0 216 0 0 0 chr17 17287475 17287499 -72217054 + (TA)n Simple_repeat Simple_repeat 2 25 0 39 22 0 0 chr17 17289204 17289250 -72215303 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr17 17289378 17289401 -72215152 + AT_rich Low_complexity Low_complexity 1 23 0 5859 46 1 3 chr17 17290341 17291059 -72213494 - L1PA6 LINE L1 -6 6148 5432 965 200 0 0 chr17 17292207 17292372 -72212181 - FRAM SINE Alu 0 166 2 214 357 57 0 chr17 17292544 17292614 -72211939 - L2 LINE L2 -16 3256 3183 2229 117 3 0 chr17 17293252 17293552 -72211001 + AluSx SINE Alu 1 301 -11 210 37 0 0 chr17 17293553 17293580 -72210973 + (CA)n Simple_repeat Simple_repeat 2 28 0 239 261 14 14 chr17 17294180 17294193 -72210360 + A-rich Low_complexity Low_complexity 3 15 -129 653 205 31 0 chr17 17294193 17294320 -72210233 + FLAM_C SINE Alu 1 131 -2 239 261 14 14 chr17 17294320 17294336 -72210217 + A-rich Low_complexity Low_complexity 15 30 -114 2087 151 0 0 chr17 17294336 17294647 -72209906 + AluSx SINE Alu 1 311 -1 239 261 14 14 chr17 17294647 17294758 -72209795 + A-rich Low_complexity Low_complexity 29 144 0 228 237 145 61 chr17 17295244 17295375 -72209178 + Charlie8 DNA MER1_type 6 147 -2270 180 0 0 0 chr17 17295641 17295661 -72208892 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 211 298 32 21 chr17 17295921 17296015 -72208538 - L3 LINE CR1 -170 1407 1313 2153 118 0 3 chr17 17296159 17296456 -72208097 - AluSx SINE Alu -16 296 1 23 78 0 0 chr17 17296692 17296743 -72207810 + AT_rich Low_complexity Low_complexity 1 51 0 2445 82 3 0 chr17 17297314 17297618 -72206935 + AluSp SINE Alu 1 305 -8 2149 90 31 7 chr17 17298024 17298314 -72206239 - AluSx SINE Alu -15 297 1 299 195 24 37 chr17 17298348 17298430 -72206123 + MIR SINE MIR 128 208 -54 358 281 21 10 chr17 17298480 17298576 -72205977 + L2 LINE L2 3213 3309 -4 2010 132 3 3 chr17 17298692 17298981 -72205572 + AluSx SINE Alu 1 289 -23 300 95 48 0 chr17 17299065 17299107 -72205446 + MER57A LTR ERV1 295 338 -65 29 0 0 0 chr17 17299108 17299137 -72205416 + AT_rich Low_complexity Low_complexity 1 29 0 435 19 0 0 chr17 17299403 17299455 -72205098 + (CA)n Simple_repeat Simple_repeat 2 53 0 2195 93 3 22 chr17 17299466 17299778 -72204775 - AluSq SINE Alu -7 306 1 24 32 0 0 chr17 17299820 17299851 -72204702 + AT_rich Low_complexity Low_complexity 1 31 0 230 295 85 62 chr17 17300044 17300173 -72204380 - MIR SINE MIR -19 243 112 21 0 0 0 chr17 17300271 17300292 -72204261 + AT_rich Low_complexity Low_complexity 1 21 0 647 267 95 22 chr17 17300309 17300624 -72203929 + L1MEd LINE L1 1193 1530 -4886 327 317 82 16 chr17 17300625 17300808 -72203745 + L1MEd LINE L1 1381 1575 -4851 253 254 57 86 chr17 17300845 17301054 -72203499 + L1MEd LINE L1 1829 2031 -4576 3861 186 50 9 chr17 17301215 17302287 -72202266 + L1MB7 LINE L1 4997 6108 -76 1030 102 0 20 chr17 17302294 17302441 -72202112 + AluSc SINE Alu 152 295 -14 330 283 141 36 chr17 17302667 17302894 -72201659 + L1ME3A LINE L1 5426 5681 -481 331 235 206 35 chr17 17302927 17303097 -72201456 + L1ME3A LINE L1 5751 5949 -221 228 293 0 67 chr17 17304462 17304581 -72199972 - Tigger1 DNA MER2_type -1337 1081 972 2239 110 0 3 chr17 17304581 17304881 -72199672 + AluSg SINE Alu 1 299 -11 228 293 0 67 chr17 17304881 17304911 -72199642 - Tigger1 DNA MER2_type -1446 972 942 183 219 0 49 chr17 17305313 17305354 -72199199 - MER5B DNA MER1_type -126 52 14 184 200 0 0 chr17 17305322 17305352 -72199201 + MER5A DNA MER1_type 145 174 -15 230 204 0 37 chr17 17305447 17305501 -72199052 - L2 LINE L2 -69 3244 3193 313 305 26 111 chr17 17305506 17305762 -72198791 + L1ME LINE L1 4918 5138 -1008 2334 93 0 0 chr17 17305762 17306062 -72198491 + AluSx SINE Alu 3 302 -10 313 305 26 111 chr17 17306062 17306156 -72198397 + L1ME LINE L1 5138 5238 -908 487 271 102 62 chr17 17306164 17306380 -72198173 + L1ME LINE L1 5283 5522 -599 2386 86 0 0 chr17 17306380 17306683 -72197870 - AluSq SINE Alu -10 303 1 487 271 102 62 chr17 17306683 17306850 -72197703 + L1ME LINE L1 5522 5681 -440 2225 97 24 0 chr17 17306871 17307161 -72197392 + AluSx SINE Alu 1 297 -15 293 148 37 19 chr17 17307391 17307445 -72197108 + MER66B LTR ERV1 290 344 -142 202 238 50 20 chr17 17307448 17307549 -72197004 + A-rich Low_complexity Low_complexity 2 105 0 254 270 159 24 chr17 17307763 17307889 -72196664 + MIR3 SINE MIR 15 157 -51 445 237 128 13 chr17 17308179 17308290 -72196263 - L1MC4 LINE L1 -4 8038 7903 279 0 0 0 chr17 17308290 17308321 -72196232 + (TG)n Simple_repeat Simple_repeat 2 32 0 445 237 128 13 chr17 17308321 17308365 -72196188 - L1MC4 LINE L1 -139 7903 7865 267 270 34 34 chr17 17308627 17308716 -72195837 - L2 LINE L2 0 3313 3225 2366 71 0 26 chr17 17308735 17309044 -72195509 + AluSg SINE Alu 1 301 -9 941 104 115 95 chr17 17309149 17309429 -72195124 + L1MA9 LINE L1 6025 6307 -5 1292 90 6 0 chr17 17310387 17310553 -72194000 + AluSq SINE Alu 132 298 -15 1586 127 65 0 chr17 17311158 17311403 -72193150 - AluSx SINE Alu -51 261 1 2053 224 42 28 chr17 17311522 17311831 -72192722 + L1M4 LINE L1 4072 4375 -1771 2037 116 3 7 chr17 17311831 17312125 -72192428 + AluSp SINE Alu 2 294 -19 2053 224 42 28 chr17 17312125 17312499 -72192054 + L1M4 LINE L1 4375 4765 -1381 24 32 0 0 chr17 17312827 17312858 -72191695 + AT_rich Low_complexity Low_complexity 1 31 0 1240 160 21 21 chr17 17312982 17313219 -72191334 + L1M4 LINE L1 5549 5785 -393 1799 119 13 36 chr17 17313268 17313570 -72190983 + AluSx SINE Alu 1 295 -17 1090 206 33 5 chr17 17313792 17314006 -72190547 + AluJo SINE Alu 2 221 -91 1328 253 98 46 chr17 17314033 17314117 -72190436 - HAL1b LINE L1 -634 714 636 2335 109 0 6 chr17 17314117 17314429 -72190124 + AluSp SINE Alu 1 310 -3 1328 253 98 46 chr17 17314429 17314441 -72190112 - HAL1b LINE L1 -712 636 626 2031 124 0 0 chr17 17314441 17314751 -72189802 - AluSx SINE Alu 0 310 1 1328 253 98 46 chr17 17314751 17315265 -72189288 - HAL1b LINE L1 -722 626 70 2089 108 24 0 chr17 17316111 17316398 -72188155 + AluSq SINE Alu 2 295 -18 2312 108 0 0 chr17 17316400 17316737 -72187816 + AluY SINE Alu 1 337 0 21 0 0 31 chr17 17316987 17317005 -72187548 + AT_rich Low_complexity Low_complexity 1 19 -12 1643 177 17 10 chr17 17317005 17317293 -72187260 + AluSx SINE Alu 1 290 -22 21 0 0 31 chr17 17317293 17317306 -72187247 + AT_rich Low_complexity Low_complexity 19 31 0 1751 224 12 29 chr17 17317434 17317916 -72186637 + L1MA9 LINE L1 3271 3744 -2402 745 60 4 2 chr17 17317916 17318166 -72186387 + AluY SINE Alu 1 307 -4 712 199 0 13 chr17 17318166 17318317 -72186236 + L1MA9 LINE L1 3735 3883 -2263 * 3641 188 69 42 chr17 17318307 17318655 -72185898 + L1MA9 LINE L1 5336 5673 -639 1892 164 10 0 chr17 17318655 17318947 -72185606 + AluJb SINE Alu 5 299 -13 3641 188 69 42 chr17 17318947 17319059 -72185494 + L1MA9 LINE L1 5673 5780 -532 2231 125 0 0 chr17 17319059 17319363 -72185190 + AluSx SINE Alu 1 304 -8 453 116 0 0 chr17 17319368 17319437 -72185116 + (TG)n Simple_repeat Simple_repeat 2 70 0 3641 188 69 42 chr17 17319437 17319883 -72184670 + L1MA9 LINE L1 5783 6274 -38 380 204 21 65 chr17 17319902 17319995 -72184558 - MER58 DNA MER1_type -2331 89 1 1647 240 82 26 chr17 17320111 17320625 -72183928 + Charlie2 DNA MER1_type 1882 2445 -417 2369 87 7 0 chr17 17320625 17320934 -72183619 - AluY SINE Alu 0 311 1 1647 240 82 26 chr17 17320934 17321098 -72183455 + Charlie2 DNA MER1_type 2445 2598 -264 5867 178 31 56 chr17 17321106 17323569 -72180984 + L1MA9 LINE L1 3881 6276 -36 2090 148 3 3 chr17 17323584 17323895 -72180658 + AluSx SINE Alu 1 311 -1 1387 137 121 20 chr17 17323901 17324149 -72180404 + AluJb SINE Alu 36 308 -4 195 313 16 16 chr17 17324265 17324329 -72180224 - MIR SINE MIR -96 166 103 498 219 164 27 chr17 17324331 17324477 -72180076 - MER5B DNA MER1_type 0 178 13 21 36 0 0 chr17 17324647 17324675 -72179878 + AT_rich Low_complexity Low_complexity 1 28 0 2240 198 40 60 chr17 17325451 17325804 -72178749 + L1MB7 LINE L1 5601 5939 -245 1786 167 30 16 chr17 17325804 17326109 -72178444 + AluJo SINE Alu 1 309 -3 2240 198 40 60 chr17 17326109 17326351 -72178202 + L1MB7 LINE L1 5939 6184 0 2076 130 0 3 chr17 17326512 17326805 -72177748 + AluSg SINE Alu 1 292 -18 2227 114 0 0 chr17 17326925 17327224 -72177329 + AluSx SINE Alu 1 299 -13 26 0 0 0 chr17 17327250 17327276 -72177277 + AT_rich Low_complexity Low_complexity 1 26 0 1963 164 0 0 chr17 17327294 17327593 -72176960 + AluSx SINE Alu 1 299 -13 381 300 73 60 chr17 17327814 17328133 -72176420 + HAL1 LINE L1 1285 1611 -896 1735 199 10 0 chr17 17328133 17328439 -72176114 + AluJo SINE Alu 1 309 -3 381 300 73 60 chr17 17328439 17328516 -72176037 + HAL1 LINE L1 1611 1686 -821 2320 77 10 23 chr17 17328523 17328823 -72175730 - AluY SINE Alu -15 296 1 628 312 85 54 chr17 17328906 17329662 -72174891 + L1ME1 LINE L1 37 815 -5581 567 258 76 55 chr17 17329653 17330014 -72174539 + L1ME1 LINE L1 1038 1411 -4985 * 1680 172 3 68 chr17 17330014 17330352 -72174201 + 7SLRNA srpRNA srpRNA 1 316 -4 567 258 76 55 chr17 17330352 17330412 -72174141 + L1ME1 LINE L1 1411 1468 -4928 897 155 0 7 chr17 17330414 17330556 -72173997 + AluSq/x SINE Alu 1 141 -172 2216 110 0 0 chr17 17330556 17330847 -72173706 + AluSx SINE Alu 1 291 -21 244 242 0 0 chr17 17330848 17330910 -72173643 + L1ME1 LINE L1 5205 5266 -949 947 241 137 71 chr17 17330938 17331405 -72173148 + L1ME1 LINE L1 5746 6228 -3 2313 101 0 7 chr17 17331417 17331715 -72172838 - AluSq SINE Alu -17 296 1 551 214 65 18 chr17 17331800 17331968 -72172585 + L1M4 LINE L1 3927 4102 -2044 186 289 19 0 chr17 17333070 17333122 -72171431 + L2 LINE L2 3217 3269 -3 2338 110 3 0 chr17 17333372 17333682 -72170871 + AluSx SINE Alu 1 311 -1 21 57 0 0 chr17 17334138 17334173 -72170380 + AT_rich Low_complexity Low_complexity 1 35 0 200 191 29 15 chr17 17334287 17334355 -72170198 + (TA)n Simple_repeat Simple_repeat 2 70 0 21 0 0 0 chr17 17334509 17334530 -72170023 + AT_rich Low_complexity Low_complexity 1 21 0 1427 158 15 125 chr17 17334570 17334726 -72169827 + AluJb SINE Alu 1 102 -200 2510 77 0 0 chr17 17334726 17335037 -72169516 + AluY SINE Alu 1 311 0 1427 158 15 125 chr17 17335037 17335216 -72169337 + AluJb SINE Alu 102 299 -3 1866 123 46 3 chr17 17335235 17335520 -72169033 + AluSg SINE Alu 1 297 -13 28 0 0 0 chr17 17335544 17335572 -72168981 + AT_rich Low_complexity Low_complexity 1 28 0 201 296 104 9 chr17 17335720 17335835 -72168718 - MIR3 SINE MIR -42 166 41 261 284 162 45 chr17 17336102 17336258 -72168295 - L1MC4a LINE L1 -1775 6033 5842 2515 69 0 3 chr17 17336258 17336561 -72167992 + AluY SINE Alu 1 302 -9 261 284 162 45 chr17 17336561 17336626 -72167927 - L1MC4a LINE L1 -1966 5842 5786 2522 67 7 0 chr17 17336626 17336923 -72167630 + AluSp SINE Alu 1 299 -14 252 0 0 0 chr17 17337399 17337427 -72167126 + (CA)n Simple_repeat Simple_repeat 2 29 0 2213 111 0 35 chr17 17338388 17338704 -72165849 + AluSc SINE Alu 1 305 -4 1922 157 3 0 chr17 17339499 17339786 -72164767 + AluSx SINE Alu 1 288 -24 2290 104 0 16 chr17 17339990 17340127 -72164426 + AluSx SINE Alu 1 139 -173 2345 98 3 0 chr17 17340127 17340434 -72164119 + AluSg SINE Alu 1 308 -2 2290 104 0 16 chr17 17340434 17340605 -72163948 + AluSx SINE Alu 139 304 -8 288 0 0 0 chr17 17341223 17341255 -72163298 + (CA)n Simple_repeat Simple_repeat 2 33 0 607 267 110 48 chr17 17341282 17341846 -72162707 + L2 LINE L2 2588 3204 -109 286 205 80 152 chr17 17342041 17342455 -72162098 + L1MC/D LINE L1 4549 4932 -1214 280 228 8 94 chr17 17342423 17342550 -72162003 + L1P LINE L1 4901 5016 -1130 * 406 185 0 37 chr17 17342948 17343029 -72161524 - MIR SINE MIR -105 157 80 2179 121 3 0 chr17 17343121 17343428 -72161125 + AluSp SINE Alu 1 308 -5 563 319 74 30 chr17 17343431 17343523 -72161030 + L1MC/D LINE L1 5265 5351 -2457 2328 109 6 0 chr17 17343523 17343834 -72160719 + AluSq SINE Alu 1 313 0 2443 93 3 0 chr17 17343838 17344148 -72160405 + AluSp SINE Alu 1 311 -2 563 319 74 30 chr17 17344148 17344457 -72160096 + L1MC/D LINE L1 5353 5689 -2119 2297 111 0 0 chr17 17344570 17344867 -72159686 - AluSx SINE Alu -14 298 2 2558 65 7 0 chr17 17345642 17345951 -72158602 + AluY SINE Alu 1 311 0 2450 68 0 58 chr17 17346214 17346540 -72158013 - AluSc SINE Alu -2 307 1 1533 181 52 7 chr17 17346753 17347040 -72157513 + AluJo SINE Alu 3 302 -10 754 148 7 49 chr17 17347623 17347765 -72156788 + FLAM_C SINE Alu 2 137 -6 2137 128 10 0 chr17 17347852 17348142 -72156411 + AluSx SINE Alu 1 293 -19 21 0 0 0 chr17 17348253 17348274 -72156279 + AT_rich Low_complexity Low_complexity 1 21 0 2212 97 3 3 chr17 17348284 17348572 -72155981 + AluSp SINE Alu 1 288 -25 21 36 0 0 chr17 17348578 17348606 -72155947 + AT_rich Low_complexity Low_complexity 1 28 0 2443 76 0 7 chr17 17348912 17349213 -72155340 - AluY SINE Alu -12 299 1 195 305 84 42 chr17 17349305 17349400 -72155153 + MIR3 SINE MIR 67 165 -43 1433 170 101 17 chr17 17349427 17349715 -72154838 - AluJb SINE Alu 0 312 1 2217 91 37 7 chr17 17350178 17350474 -72154079 + AluSg SINE Alu 1 305 -5 1734 147 56 3 chr17 17350972 17351257 -72153296 + AluJb SINE Alu 1 300 -12 2403 72 10 3 chr17 17351393 17351699 -72152854 + AluY SINE Alu 1 308 -3 392 227 57 43 chr17 17351853 17351994 -72152559 - MIR SINE MIR -43 219 77 202 159 0 45 chr17 17353663 17353707 -72150846 + (CCG)n Simple_repeat Simple_repeat 2 43 0 2004 115 10 0 chr17 17354401 17354696 -72149857 + AluSx SINE Alu 1 298 -14 2398 56 28 0 chr17 17354697 17354984 -72149569 + AluSg SINE Alu 1 295 -15 401 206 56 9 chr17 17356285 17356392 -72148161 + L1MB7 LINE L1 6071 6182 -2 386 294 37 0 chr17 17356510 17356619 -72147934 - L2 LINE L2 -1 3312 3200 2280 103 7 3 chr17 17356860 17357162 -72147391 - AluSx SINE Alu -9 303 1 1970 85 68 48 chr17 17357248 17357542 -72147011 - AluY SINE Alu -11 300 1 1956 151 17 0 chr17 17357746 17358045 -72146508 - AluSx SINE Alu -8 304 1 2318 84 0 0 chr17 17358250 17358535 -72146018 + AluSc SINE Alu 1 285 -24 2262 101 7 3 chr17 17358663 17358970 -72145583 - AluSx SINE Alu -4 308 1 1041 124 0 0 chr17 17358970 17359115 -72145438 - AluSq/x SINE Alu -168 145 1 604 174 9 9 chr17 17359533 17359633 -72144920 - AluJo/FRAM SINE Alu -75 237 135 2001 132 27 10 chr17 17359633 17359799 -72144754 - AluSx SINE Alu -11 301 126 2242 96 20 3 chr17 17359799 17360101 -72144452 - AluSg SINE Alu -3 307 1 2001 132 27 10 chr17 17360101 17360230 -72144323 - AluSx SINE Alu -186 126 1 417 248 54 16 chr17 17360626 17360755 -72143798 - MIR SINE MIR -70 192 59 2128 144 0 0 chr17 17360912 17361224 -72143329 + AluSx SINE Alu 1 312 0 181 319 14 0 chr17 17361409 17361478 -72143075 - L2 LINE L2 -557 2757 2688 2234 110 0 0 chr17 17361479 17361769 -72142784 + AluSg SINE Alu 1 290 -20 935 126 0 15 chr17 17361780 17361915 -72142638 + FLAM_C SINE Alu 1 133 0 2107 104 0 28 chr17 17362117 17362405 -72142148 + AluSc SINE Alu 1 280 -29 1750 127 4 4 chr17 17362545 17362789 -72141764 - AluSx SINE Alu -68 244 1 2173 106 0 0 chr17 17362855 17363138 -72141415 - AluY SINE Alu -28 283 1 317 232 46 53 chr17 17363143 17363294 -72141259 - L1M4 LINE L1 -1538 4608 4459 242 218 152 30 chr17 17363381 17363546 -72141007 - L1MEd LINE L1 -5235 884 700 1609 80 0 14 chr17 17363562 17363774 -72140779 - AluY SINE Alu -3 308 100 269 59 0 0 chr17 17363776 17363810 -72140743 - AluY SINE Alu -266 34 1 193 28 0 56 chr17 17363810 17363846 -72140707 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 286 323 75 8 chr17 17363889 17364022 -72140531 - L1MEd LINE L1 -5501 618 477 239 217 0 0 chr17 17364024 17364070 -72140483 - MLT1G1 LTR MaLR -16 526 481 1042 183 59 9 chr17 17364087 17364306 -72140247 + AluJo SINE Alu 7 236 -76 845 265 217 12 chr17 17364399 17364802 -72139751 - MLT1G1 LTR MaLR -124 466 1 337 291 47 12 chr17 17365082 17365254 -72139299 - L1MEd LINE L1 -5936 183 6 2349 84 3 19 chr17 17365281 17365591 -72138962 - AluSx SINE Alu -5 307 3 2455 90 7 0 chr17 17365751 17366061 -72138492 - AluSp SINE Alu -1 312 1 3996 160 44 46 chr17 17366191 17366233 -72138320 - L1MB4 LINE L1 -6 6174 6133 2283 95 0 20 chr17 17366233 17366539 -72138014 - AluSq SINE Alu -12 301 2 262 24 71 0 chr17 17366540 17366582 -72137971 + T-rich Low_complexity Low_complexity 2 46 0 2452 38 0 14 chr17 17366582 17366869 -72137684 - AluY SINE Alu -27 284 2 3996 160 44 46 chr17 17366869 17367171 -72137382 - L1MB4 LINE L1 -46 6134 5833 1821 168 0 20 chr17 17367171 17367468 -72137085 + AluJo SINE Alu 1 291 -21 3996 160 44 46 chr17 17367468 17367507 -72137046 - L1MB4 LINE L1 -347 5833 5795 240 111 0 0 chr17 17367507 17367543 -72137010 + (TA)n Simple_repeat Simple_repeat 1 36 0 3996 160 44 46 chr17 17367543 17368018 -72136535 - L1MB4 LINE L1 -385 5795 5313 2470 83 0 3 chr17 17368041 17368343 -72136210 - AluSc SINE Alu -8 301 1 622 307 58 0 chr17 17368400 17368641 -72135912 + LTR33A LTR ERVL 262 516 -7 1005 151 0 42 chr17 17368805 17368971 -72135582 - AluSc SINE Alu -16 293 135 27 49 0 0 chr17 17369044 17369085 -72135468 + AT_rich Low_complexity Low_complexity 1 41 0 632 149 52 67 chr17 17369257 17369391 -72135162 - FLAM_C SINE Alu 0 133 2 1868 170 0 22 chr17 17369405 17369722 -72134831 - AluJo SINE Alu -2 310 1 23 33 0 0 chr17 17369769 17369799 -72134754 + AT_rich Low_complexity Low_complexity 1 30 0 289 199 185 7 chr17 17370016 17370162 -72134391 - Charlie7 DNA MER1_type -1 2611 2440 2317 114 0 0 chr17 17370178 17370484 -72134069 + AluSq SINE Alu 1 306 -7 2103 102 28 0 chr17 17371021 17371306 -72133247 + AluSg SINE Alu 2 294 -16 287 238 8 16 chr17 17371311 17371402 -72133151 - MIR SINE MIR -62 146 63 1801 124 84 0 chr17 17372370 17372643 -72131910 + AluSg SINE Alu 1 296 -14 2171 111 0 3 chr17 17372664 17372952 -72131601 + AluSx SINE Alu 1 287 -25 543 251 75 139 chr17 17373086 17373615 -72130938 - L1MC5 LINE L1 -51 7910 7470 2184 116 0 28 chr17 17373615 17373935 -72130618 - AluSx SINE Alu -1 311 1 543 251 75 139 chr17 17373935 17374378 -72130175 - L1MC5 LINE L1 -491 7470 7000 758 248 9 76 chr17 17374437 17374754 -72129799 - L1MC5 LINE L1 -902 6906 6680 2267 104 0 3 chr17 17374754 17375051 -72129502 - AluSx SINE Alu -16 296 1 758 248 9 76 chr17 17375051 17375113 -72129440 - L1MC5 LINE L1 -1128 6680 6615 971 179 27 0 chr17 17375114 17375284 -72129269 - AluJo SINE Alu -4 308 131 2389 101 0 0 chr17 17375284 17375590 -72128963 - AluSx SINE Alu -6 306 1 971 179 27 0 chr17 17375590 17375603 -72128950 - AluJo SINE Alu -181 131 120 1928 166 7 3 chr17 17375701 17376008 -72128545 + AluJb SINE Alu 1 308 -4 2485 76 0 0 chr17 17376098 17376399 -72128154 + AluSg SINE Alu 1 301 -9 1547 88 5 0 chr17 17376608 17376812 -72127741 - AluSx SINE Alu -2 308 104 2291 100 0 3 chr17 17376812 17377111 -72127442 + AluSg SINE Alu 2 299 -11 843 114 0 0 chr17 17377111 17377225 -72127328 - AluSx SINE Alu -198 114 1 739 193 0 22 chr17 17377235 17377370 -72127183 + FLAM_A SINE Alu 1 132 -1 2294 84 3 3 chr17 17377385 17377695 -72126858 + AluSg SINE Alu 1 310 0 1187 165 121 40 chr17 17377974 17378148 -72126405 - AluJo SINE Alu -18 294 89 2510 128 43 19 chr17 17378148 17378563 -72125990 + MSTA LTR MaLR 1 425 -3 1187 165 121 40 chr17 17378563 17378660 -72125893 - AluJo SINE Alu -223 89 1 1562 177 16 10 chr17 17378672 17378982 -72125571 - AluJo SINE Alu 0 312 1 2292 73 3 19 chr17 17379009 17379322 -72125231 + AluSp SINE Alu 1 308 -5 1823 104 79 0 chr17 17379489 17379767 -72124786 + AluSp SINE Alu 1 300 -13 563 271 111 0 chr17 17379939 17380226 -72124327 - L1ME4a LINE L1 -194 5927 5603 1371 203 33 13 chr17 17380226 17380531 -72124022 - AluJo SINE Alu -1 311 1 563 271 111 0 chr17 17380531 17380549 -72124004 - L1ME4a LINE L1 -518 5603 5588 565 281 99 80 chr17 17380585 17380834 -72123719 - L1ME4a LINE L1 -1731 4415 4172 1534 125 188 4 chr17 17380834 17381090 -72123463 - AluSp SINE Alu 0 303 1 565 281 99 80 chr17 17381090 17381234 -72123319 - L1ME4a LINE L1 -1974 4172 4011 2077 121 3 0 chr17 17381234 17381532 -72123021 - AluSx SINE Alu -13 299 1 565 281 99 80 chr17 17381532 17381561 -72122992 - L1ME4a LINE L1 -2135 4011 3984 352 280 56 9 chr17 17381726 17381833 -72122720 + MIR SINE MIR 28 139 -123 4941 71 48 5 chr17 17381955 17382617 -72121936 - LTR8 LTR ERV1 0 691 1 298 214 0 0 chr17 17382783 17382839 -72121714 - Tigger5 DNA MER2_type -6 2317 2262 1875 159 0 10 chr17 17382850 17383158 -72121395 - AluJb SINE Alu -5 307 3 2040 128 7 0 chr17 17383169 17383473 -72121080 - AluSq SINE Alu -7 306 1 986 118 0 0 chr17 17383474 17383609 -72120944 - AluSq/x SINE Alu -177 135 1 366 231 0 0 chr17 17383612 17383690 -72120863 + Tigger5 DNA MER2_type 2243 2320 -3 359 48 0 0 chr17 17383705 17383747 -72120806 - AluSc SINE Alu -17 282 241 1026 94 0 7 chr17 17383747 17383885 -72120668 - AluSc SINE Alu -172 137 1 350 326 0 0 chr17 17383885 17383974 -72120579 - L1MC4 LINE L1 -1340 6702 6614 309 360 0 0 chr17 17383898 17383987 -72120566 + L1MC4 LINE L1 6614 6702 -1340 * 2075 86 0 40 chr17 17384003 17384305 -72120248 - AluY SINE Alu -21 290 1 2254 67 21 0 chr17 17384420 17384704 -72119849 + AluSc SINE Alu 1 290 -19 1364 193 55 55 chr17 17384750 17384855 -72119698 - MLT1B LTR MaLR -4 386 282 2734 6 0 13 chr17 17384855 17385171 -72119382 - AluYb8 SINE Alu -6 312 1 1364 193 55 55 chr17 17385171 17385448 -72119105 - MLT1B LTR MaLR -107 283 4 1552 185 229 0 chr17 17385451 17385792 -72118761 - MLT1B-int LTR MaLR 0 1735 1317 359 228 65 11 chr17 17385768 17385860 -72118693 - MLT1B-int LTR MaLR -953 782 686 * 3216 194 35 21 chr17 17385957 17386064 -72118489 - MLT1B-int LTR MaLR -655 716 612 2299 92 0 0 chr17 17386064 17386368 -72118185 - AluSg SINE Alu -6 304 1 3216 194 35 21 chr17 17386368 17386966 -72117587 - MLT1B-int LTR MaLR -759 612 1 1089 196 36 46 chr17 17386966 17387247 -72117306 - MLT1A2 LTR MaLR 0 374 97 811 163 16 0 chr17 17387249 17387378 -72117175 + Tigger7 DNA MER2_type 1 131 -574 1891 120 0 7 chr17 17387378 17387654 -72116899 + AluSx SINE Alu 1 274 -38 1991 189 176 22 chr17 17387654 17387667 -72116886 - MLT2B3 LTR ERVL -22 532 522 207 0 0 0 chr17 17387667 17387690 -72116863 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1991 189 176 22 chr17 17387690 17388126 -72116427 - MLT2B3 LTR ERVL -32 522 14 1854 145 0 10 chr17 17388135 17388432 -72116121 - AluSq SINE Alu -19 294 1 964 164 0 7 chr17 17388455 17388607 -72115946 + Tigger7 DNA MER2_type 2337 2487 0 406 188 115 31 chr17 17388607 17388703 -72115850 - MLT1A2 LTR MaLR -286 104 1 592 237 160 12 chr17 17388897 17389066 -72115487 - MIR SINE MIR -58 204 11 395 313 41 27 chr17 17389110 17389257 -72115296 - MIR SINE MIR -70 192 44 1897 153 10 0 chr17 17389326 17389621 -72114932 + AluJb SINE Alu 1 298 -14 199 246 87 72 chr17 17389891 17389960 -72114593 - L2 LINE L2 -10 3303 3234 2291 88 0 0 chr17 17390249 17390554 -72113999 - AluSc SINE Alu -4 305 1 44 63 0 0 chr17 17390728 17390807 -72113746 + AT_rich Low_complexity Low_complexity 1 79 0 1226 163 26 115 chr17 17391118 17391467 -72113086 + AluYb8 SINE Alu 1 318 0 636 163 23 0 chr17 17391579 17391708 -72112845 + L1MA7 LINE L1 6154 6285 -6 1522 185 17 14 chr17 17391844 17392141 -72112412 + AluJo SINE Alu 1 298 -14 213 279 67 117 chr17 17392200 17392379 -72112174 + L2 LINE L2 2893 3062 -210 2332 93 3 0 chr17 17392439 17392749 -72111804 - AluSp SINE Alu -1 312 2 183 114 0 0 chr17 17392760 17392795 -72111758 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2255 77 7 0 chr17 17392797 17393084 -72111469 - AluY SINE Alu -22 289 1 350 230 3 24 chr17 17394306 17394416 -72110137 + L1MC/D LINE L1 5664 5768 -353 1867 99 3 51 chr17 17394507 17394832 -72109721 - AluSg SINE Alu 0 311 1 1474 165 53 4 chr17 17394850 17395165 -72109388 - AluJb SINE Alu 0 333 6 533 144 41 41 chr17 17395194 17395291 -72109262 + AluJb SINE Alu 194 290 -22 2296 93 0 10 chr17 17395317 17395629 -72108924 + AluSq SINE Alu 1 309 -4 2039 101 7 0 chr17 17395967 17396244 -72108309 + AluSq SINE Alu 3 281 -32 768 52 0 0 chr17 17396244 17396341 -72108212 + (GA)n Simple_repeat Simple_repeat 2 98 0 2197 102 0 0 chr17 17396357 17396660 -72107893 - AluSg SINE Alu -7 303 1 1976 121 11 0 chr17 17396663 17396983 -72107570 - AluSp SINE Alu 0 323 1 668 106 97 0 chr17 17397492 17397605 -72106948 + L1MD3 LINE L1 4832 4955 -1191 598 143 0 36 chr17 17397606 17397718 -72106835 + FLAM_C SINE Alu 36 143 0 626 188 72 0 chr17 17397718 17397856 -72106697 + L1MD3 LINE L1 4943 5090 -1056 4164 184 81 64 chr17 17397856 17399020 -72105533 + MER52A LTR ERV1 1 1226 -529 2189 107 0 3 chr17 17399020 17399319 -72105234 + AluSg SINE Alu 1 298 -12 4164 184 81 64 chr17 17399319 17399419 -72105134 + MER52A LTR ERV1 1226 1323 -432 735 177 0 8 chr17 17399424 17399548 -72105005 + MER52A LTR ERV1 1633 1755 0 927 196 10 0 chr17 17399548 17399747 -72104806 + L1MD3 LINE L1 5087 5287 -859 366 202 9 132 chr17 17399747 17399869 -72104684 + AluJ/FLAM SINE Alu 1 93 -209 1160 147 0 21 chr17 17399885 17400076 -72104477 - AluJb SINE Alu -115 197 11 22 0 0 0 chr17 17400093 17400115 -72104438 + AT_rich Low_complexity Low_complexity 1 22 0 2031 133 0 0 chr17 17400123 17400416 -72104137 + AluSx SINE Alu 1 293 -19 1407 196 26 191 chr17 17400417 17400731 -72103822 + L1MD3 LINE L1 5306 5544 -2451 688 181 24 16 chr17 17400731 17400858 -72103695 + FLAM_A SINE Alu 12 139 -3 2429 167 41 24 chr17 17400858 17401368 -72103185 + L1MB7 LINE L1 5604 6122 -62 1515 169 53 3 chr17 17401369 17401653 -72102900 - AluJo SINE Alu -14 298 1 2106 110 7 3 chr17 17401702 17402003 -72102550 - AluSc SINE Alu -7 302 1 2186 79 0 64 chr17 17402016 17402193 -72102360 - AluSq SINE Alu -5 308 160 2042 106 25 0 chr17 17402193 17402477 -72102076 - AluSx SINE Alu -8 304 14 2186 79 0 64 chr17 17402477 17402628 -72101925 - AluSq SINE Alu -153 160 1 1723 72 83 51 chr17 17402782 17403109 -72101444 - AluSq SINE Alu 0 336 1 2139 96 3 3 chr17 17403643 17403936 -72100617 + AluSg SINE Alu 1 293 -17 1772 111 93 0 chr17 17404315 17404594 -72099959 + AluSx SINE Alu 1 305 -7 2241 65 0 10 chr17 17404781 17405074 -72099479 - AluY SINE Alu -16 295 6 2132 135 85 50 chr17 17405196 17405633 -72098920 - Tigger2 DNA MER2_type 0 2718 2267 478 72 29 14 chr17 17405615 17405684 -72098869 + MER8 DNA MER2_type 170 239 0 * 911 188 53 0 chr17 17405737 17405907 -72098646 + FRAM SINE Alu 1 176 0 327 288 40 107 chr17 17406144 17406443 -72098110 - L2 LINE L2 -68 3204 2926 212 0 36 0 chr17 17406616 17406644 -72097909 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2090 109 0 3 chr17 17406646 17406931 -72097622 - AluSq SINE Alu -28 285 2 2039 119 0 10 chr17 17406932 17407244 -72097309 - AluSc SINE Alu 0 309 1 538 224 98 7 chr17 17407250 17407393 -72097160 - MIR SINE MIR -26 236 81 2095 103 7 10 chr17 17407548 17407849 -72096704 + AluSx SINE Alu 1 300 -12 380 305 46 40 chr17 17407849 17408000 -72096553 - MER5B DNA MER1_type -26 152 1 2201 87 0 7 chr17 17408187 17408486 -72096067 + AluSq SINE Alu 1 297 -16 210 100 80 0 chr17 17408607 17408657 -72095896 + (TTAA)n Simple_repeat Simple_repeat 1 54 0 2234 86 20 0 chr17 17408797 17409099 -72095454 + AluSx SINE Alu 1 308 -4 339 299 97 19 chr17 17409427 17409581 -72094972 + MIR3 SINE MIR 40 205 -3 585 101 54 88 chr17 17409621 17409719 -72094834 - MER53 DNA DNA 0 189 96 2246 99 0 0 chr17 17409719 17410012 -72094541 - AluSg SINE Alu -17 293 1 585 101 54 88 chr17 17410012 17410061 -72094492 - MER53 DNA DNA -93 96 47 180 0 0 0 chr17 17410061 17410081 -72094472 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 541 195 31 39 chr17 17410084 17410212 -72094341 - FLAM_C SINE Alu -16 127 1 489 271 93 74 chr17 17410630 17411051 -72093502 + L2 LINE L2 1685 2113 -1201 483 320 174 12 chr17 17411224 17411471 -72093082 - L2 LINE L2 -1 3271 2985 186 398 68 31 chr17 17411516 17411931 -72092622 - L2 LINE L2 -454 2860 2431 216 97 0 0 chr17 17412558 17412589 -72091964 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3135 120 30 52 chr17 17412590 17412623 -72091930 - MER41B LTR ERV1 -88 547 515 2252 87 0 0 chr17 17412623 17412921 -72091632 + AluSq SINE Alu 1 298 -15 3135 120 30 52 chr17 17412921 17412932 -72091621 - MER41B LTR ERV1 -120 515 505 2169 114 0 0 chr17 17412932 17413240 -72091313 + AluSx SINE Alu 1 308 -4 3135 120 30 52 chr17 17413240 17413753 -72090800 - MER41B LTR ERV1 -130 505 1 13023 93 21 18 chr17 17413753 17413924 -72090629 - MER41B-int LTR ERV1 0 5946 5777 1998 144 0 0 chr17 17413924 17414223 -72090330 + AluSx SINE Alu 1 299 -13 13023 93 21 18 chr17 17414223 17414633 -72089920 - MER41B-int LTR ERV1 -169 5777 5370 1991 121 0 14 chr17 17414633 17414942 -72089611 + AluSq SINE Alu 1 305 0 13023 93 21 18 chr17 17414942 17416238 -72088315 - MER41B-int LTR ERV1 -576 5370 2430 1493 132 0 0 chr17 17416238 17416451 -72088102 - AluSx SINE Alu -12 298 86 632 119 0 0 chr17 17416485 17416569 -72087984 - AluSx SINE Alu -227 86 3 2780 73 35 12 chr17 17416571 17416993 -72087560 - MER41B-int LTR ERV1 -2227 3719 3288 1653 119 65 18 chr17 17416979 17417256 -72087297 - MER41B-int LTR ERV1 -3025 2921 2632 * 532 165 35 0 chr17 17417255 17417340 -72087213 - MER41B-int LTR ERV1 -5858 88 1 * 1004 105 26 7 chr17 17417340 17417492 -72087061 - MER41B LTR ERV1 0 635 481 1054 148 76 52 chr17 17418665 17418875 -72085678 - L1MC1 LINE L1 -1 6332 6118 2054 111 0 0 chr17 17418877 17419185 -72085368 - AluSg1 SINE Alu 0 308 1 215 250 0 0 chr17 17420768 17420812 -72083741 + MIR3 SINE MIR 156 199 -9 1674 131 27 44 chr17 17421068 17421189 -72083364 + AluJb SINE Alu 1 123 -189 2118 118 0 0 chr17 17421189 17421485 -72083068 - AluSx SINE Alu -16 296 1 1674 131 27 44 chr17 17421485 17421661 -72082892 + AluJb SINE Alu 123 293 -19 739 203 0 0 chr17 17421721 17421854 -72082699 + FLAM_C SINE Alu 1 133 0 2287 91 0 3 chr17 17422152 17422459 -72082094 - AluSq SINE Alu -7 306 1 411 186 2 16 chr17 17422478 17422561 -72081992 - AluS SINE Alu -236 67 1 * 3923 83 2 63 chr17 17422561 17423144 -72081409 + LTR8 LTR ERV1 145 691 0 663 169 8 32 chr17 17423178 17423302 -72081251 - FLAM_C SINE Alu -21 122 2 1932 93 58 0 chr17 17423487 17423765 -72080788 + AluSg SINE Alu 1 294 -16 313 354 23 23 chr17 17425114 17425244 -72079309 + L2 LINE L2 3141 3270 -2 470 228 158 38 chr17 17426103 17426261 -72078292 - L1ME LINE L1 -452 5669 5493 195 42 0 0 chr17 17426360 17426384 -72078169 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 2113 112 7 0 chr17 17426384 17426687 -72077866 - AluSq SINE Alu -8 305 1 2316 90 3 3 chr17 17426709 17427021 -72077532 - AluSp SINE Alu -1 312 1 2349 100 3 0 chr17 17427958 17428258 -72076295 - AluSp SINE Alu -12 301 1 1829 97 43 8 chr17 17428262 17428519 -72076034 - AluSx SINE Alu 0 312 47 206 136 23 0 chr17 17428536 17428580 -72075973 + C-rich Low_complexity Low_complexity 1 45 0 1535 182 52 21 chr17 17428580 17428866 -72075687 - AluJb SINE Alu -17 295 1 186 43 0 0 chr17 17428875 17428898 -72075655 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1687 149 11 8 chr17 17428900 17429162 -72075391 - AluJb SINE Alu -49 263 1 2319 122 3 0 chr17 17429408 17429719 -72074834 + AluSx SINE Alu 1 312 0 2352 99 3 0 chr17 17429766 17430069 -72074484 + AluSx SINE Alu 1 304 -8 519 186 0 0 chr17 17430072 17430169 -72074384 + FLAM_A SINE Alu 44 140 -2 2019 116 4 0 chr17 17430215 17430483 -72074070 - AluSx SINE Alu -10 302 34 213 336 57 16 chr17 17430547 17430669 -72073884 + L2 LINE L2 1662 1788 -1526 452 243 62 11 chr17 17430694 17430871 -72073682 + L1ME LINE L1 5615 5800 -321 2399 66 0 13 chr17 17431425 17431726 -72072827 + AluY SINE Alu 1 297 -14 230 274 201 62 chr17 17432316 17432495 -72072058 - MIR3 SINE MIR -2 206 3 391 268 51 29 chr17 17432837 17432975 -72071578 + LTR33A LTR ERVL 40 180 -343 611 231 54 45 chr17 17433031 17433252 -72071301 + LTR33A LTR ERVL 298 520 -3 2243 87 4 0 chr17 17433324 17433601 -72070952 + AluSx SINE Alu 21 298 -14 1098 156 6 0 chr17 17433679 17433839 -72070714 + AluJb SINE Alu 133 293 -19 2203 119 10 0 chr17 17433844 17434147 -72070406 + AluSq SINE Alu 1 306 -7 396 213 49 55 chr17 17434192 17434356 -72070197 - Charlie7 DNA MER1_type -1 2611 2449 288 284 25 0 chr17 17434363 17434444 -72070109 - Charlie7 DNA MER1_type -2521 91 9 2452 101 0 0 chr17 17434512 17434819 -72069734 + AluSg SINE Alu 1 307 -3 2319 50 4 14 chr17 17434922 17435201 -72069352 - AluY SINE Alu -35 276 1 1898 132 138 0 chr17 17436021 17436317 -72068236 + MER1B DNA MER1_type 1 337 0 197 308 39 0 chr17 17436383 17436435 -72068118 + L2 LINE L2 2717 2770 -544 2217 125 3 10 chr17 17436928 17437241 -72067312 + AluSx SINE Alu 1 311 -1 1050 118 0 0 chr17 17437241 17437377 -72067176 + AluSg/x SINE Alu 132 267 -43 2032 97 40 4 chr17 17437378 17437656 -72066897 + AluSx SINE Alu 25 312 0 2228 128 3 0 chr17 17438581 17438885 -72065668 + AluSx SINE Alu 1 305 -7 276 222 74 12 chr17 17438889 17438970 -72065583 - MIR SINE MIR -120 142 57 351 106 0 30 chr17 17439319 17439385 -72065168 - FAM SINE Alu 0 179 116 1068 171 21 36 chr17 17439385 17439442 -72065111 - AluJo SINE Alu -122 190 134 2405 96 3 0 chr17 17439442 17439744 -72064809 - AluSg SINE Alu -7 303 1 2475 79 7 0 chr17 17439746 17440051 -72064502 - AluY SINE Alu -4 307 1 1068 171 21 36 chr17 17440051 17440183 -72064370 - AluJo SINE Alu -179 133 1 2263 113 3 0 chr17 17440775 17441077 -72063476 - AluSc SINE Alu -4 305 3 1276 118 0 0 chr17 17441717 17441886 -72062667 - AluSg/x SINE Alu -8 304 136 2644 62 0 0 chr17 17441888 17442196 -72062357 - AluY SINE Alu -3 308 1 838 141 0 44 chr17 17442662 17442797 -72061756 + FLAM_C SINE Alu 5 133 0 396 266 28 46 chr17 17442918 17443027 -72061526 - L2 LINE L2 -5 3308 3202 927 168 39 39 chr17 17443041 17443187 -72061366 - MER20 DNA MER1_type -16 203 55 1592 150 49 65 chr17 17443187 17443494 -72061059 + AluJo SINE Alu 1 302 -10 927 168 39 39 chr17 17443494 17443550 -72061003 - MER20 DNA MER1_type -163 56 1 949 162 0 42 chr17 17443966 17444133 -72060420 - AluJo/FRAM SINE Alu -19 293 134 2180 107 3 7 chr17 17444133 17444431 -72060122 - AluSg SINE Alu -13 297 1 200 269 17 131 chr17 17444453 17444628 -72059925 - MIR SINE MIR -62 146 43 2406 85 3 3 chr17 17444705 17445011 -72059542 - AluSp SINE Alu -7 306 1 231 146 21 62 chr17 17445785 17445833 -72058720 + MIR SINE MIR 217 262 0 1587 172 47 37 chr17 17445867 17446163 -72058390 + AluJo SINE Alu 1 299 -13 186 43 0 0 chr17 17446192 17446215 -72058338 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 2312 102 0 0 chr17 17446235 17446528 -72058025 + AluSg1 SINE Alu 1 293 -16 446 220 28 46 chr17 17446630 17446739 -72057814 - L2 LINE L2 -5 3308 3202 890 184 0 7 chr17 17446791 17446932 -72057621 + AluJo SINE Alu 19 158 -154 1626 168 47 37 chr17 17446975 17447273 -72057280 - AluJo SINE Alu -11 301 1 714 173 0 0 chr17 17447355 17447465 -72057088 + AluJo SINE Alu 164 273 -39 2140 129 3 10 chr17 17447663 17447974 -72056579 + AluSg SINE Alu 1 309 -1 2281 125 3 0 chr17 17447979 17448290 -72056263 + AluSx SINE Alu 1 312 0 342 0 0 0 chr17 17448469 17448507 -72056046 + (TG)n Simple_repeat Simple_repeat 2 39 0 188 371 48 57 chr17 17448627 17448724 -72055829 - MIR SINE MIR -69 139 42 2056 89 8 0 chr17 17448724 17448981 -72055572 - AluSq SINE Alu -18 295 37 188 371 48 57 chr17 17448981 17449007 -72055546 - MIR SINE MIR -166 42 17 288 329 63 14 chr17 17449028 17449171 -72055382 + MIR SINE MIR 5 154 -108 210 276 0 48 chr17 17449381 17449486 -72055067 + T-rich Low_complexity Low_complexity 2 101 0 315 221 92 53 chr17 17449497 17449628 -72054925 - MIR SINE MIR -64 198 63 11198 36 3 84 chr17 17449641 17451140 -72053413 - SVA Other Other 0 1386 9 2197 76 65 3 chr17 17453867 17454178 -72050375 - AluSg SINE Alu 0 329 1 420 264 52 21 chr17 17455472 17455644 -72048909 - MIR SINE MIR -59 203 32 22 35 0 0 chr17 17456276 17456305 -72048248 + AT_rich Low_complexity Low_complexity 1 29 0 615 243 91 61 chr17 17456307 17456448 -72048105 - L1ME4a LINE L1 -3 6118 5983 2317 102 3 3 chr17 17456448 17456753 -72047800 - AluSq SINE Alu -8 305 1 615 243 91 61 chr17 17456753 17456833 -72047720 - L1ME4a LINE L1 -138 5983 5907 2249 117 3 0 chr17 17456833 17457132 -72047421 + AluSg SINE Alu 1 300 -10 615 243 91 61 chr17 17457132 17457154 -72047399 - L1ME4a LINE L1 -214 5907 5887 1686 150 107 0 chr17 17457154 17457434 -72047119 + AluJo SINE Alu 1 310 -2 615 243 91 61 chr17 17457434 17457583 -72046970 - L1ME4a LINE L1 -234 5887 5712 2270 94 3 3 chr17 17457655 17457954 -72046599 + AluSx SINE Alu 1 299 -13 517 206 0 0 chr17 17458187 17458289 -72046264 + FLAM_A SINE Alu 1 102 -40 850 150 8 21 chr17 17458325 17458566 -72045987 + GA-rich Low_complexity Low_complexity 1 237 0 634 189 6 23 chr17 17458580 17458755 -72045798 + GA-rich Low_complexity Low_complexity 1 172 0 2249 123 0 19 chr17 17458800 17459117 -72045436 - AluSx SINE Alu -1 311 1 2374 113 0 0 chr17 17459118 17459420 -72045133 - AluSx SINE Alu -10 302 1 2221 116 3 0 chr17 17459420 17459722 -72044831 - AluSp SINE Alu -10 303 1 206 274 145 0 chr17 17459742 17459804 -72044749 - L2 LINE L2 -11 3261 3191 234 91 0 0 chr17 17459889 17459922 -72044631 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 2390 78 6 34 chr17 17459943 17460265 -72044288 - AluSp SINE Alu 0 313 1 2245 119 0 3 chr17 17460267 17460577 -72043976 - AluSx SINE Alu -3 309 1 317 311 0 0 chr17 17460649 17460781 -72043772 - L1M4 LINE L1 -3129 3017 2886 2554 195 106 12 chr17 17460807 17461375 -72043178 - MER82 DNA MER2_type -2 651 31 2225 111 3 3 chr17 17461418 17461716 -72042837 - AluSq SINE Alu -15 298 1 21 36 0 0 chr17 17461728 17461756 -72042797 + AT_rich Low_complexity Low_complexity 1 28 0 2170 114 0 19 chr17 17461792 17462099 -72042454 - AluSg SINE Alu -9 301 1 2056 123 0 27 chr17 17462133 17462447 -72042106 - AluSq SINE Alu 0 306 1 2067 84 15 96 chr17 17462506 17462840 -72041713 - AluSx SINE Alu -4 308 2 2404 71 40 0 chr17 17463246 17463542 -72041011 + AluY SINE Alu 1 308 -3 368 282 124 64 chr17 17463545 17463747 -72040806 + MIR SINE MIR 28 241 -21 231 219 0 135 chr17 17464295 17464391 -72040162 + MIR SINE MIR 144 226 -36 573 222 169 11 chr17 17464889 17465078 -72039475 + MIR SINE MIR 13 231 -31 421 299 171 19 chr17 17465390 17465543 -72039010 + L1ME LINE L1 5501 5696 -425 2045 133 17 0 chr17 17465543 17465837 -72038716 + AluSx SINE Alu 1 299 -13 421 299 171 19 chr17 17465837 17465894 -72038659 + L1ME LINE L1 5696 5743 -378 222 222 0 0 chr17 17465986 17466040 -72038513 + (TA)n Simple_repeat Simple_repeat 2 55 0 2255 88 3 0 chr17 17466186 17466471 -72038082 + AluSc SINE Alu 3 288 -21 1980 169 7 0 chr17 17466480 17466782 -72037771 + AluJb SINE Alu 1 304 -8 306 0 0 0 chr17 17466782 17466816 -72037737 + (TA)n Simple_repeat Simple_repeat 2 35 0 1172 119 18 0 chr17 17466950 17467118 -72037435 + AluSg/x SINE Alu 142 312 0 324 337 78 48 chr17 17467362 17467528 -72037025 - MER91A DNA MER1_type -23 173 3 500 317 160 13 chr17 17468098 17468398 -72036155 + HAL1 LINE L1 1113 1456 -1051 2366 107 0 0 chr17 17468409 17468708 -72035845 + AluSx SINE Alu 1 299 -13 2496 68 7 0 chr17 17468711 17469006 -72035547 + AluSc SINE Alu 1 297 -12 324 328 89 39 chr17 17469132 17469391 -72035162 + L1 LINE L1 2859 3130 -3016 * 463 289 117 63 chr17 17469361 17469711 -72034842 + L1M4 LINE L1 2248 2616 -3530 1021 160 35 25 chr17 17469775 17469940 -72034613 - AluJo SINE Alu 0 302 140 2133 107 17 14 chr17 17469940 17470248 -72034305 - AluSx SINE Alu 0 312 1 1021 160 35 25 chr17 17470248 17470261 -72034292 - AluJo SINE Alu -162 140 129 198 0 0 0 chr17 17470261 17470283 -72034270 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1021 160 35 25 chr17 17470283 17470323 -72034230 - AluJo SINE Alu -173 129 81 765 274 188 50 chr17 17470369 17470905 -72033648 + L1M4 LINE L1 2745 3354 -2792 780 135 326 6 chr17 17470912 17471090 -72033463 + AluSg/x SINE Alu 65 299 -10 2557 177 51 26 chr17 17471090 17471404 -72033149 + L1MB5 LINE L1 5496 5830 -344 2339 108 0 7 chr17 17471404 17471710 -72032843 + AluSg SINE Alu 1 304 -6 2557 177 51 26 chr17 17471710 17471927 -72032626 + L1MB5 LINE L1 5830 6040 -134 24 32 0 0 chr17 17471927 17471958 -72032595 + AT_rich Low_complexity Low_complexity 1 31 0 1160 186 21 0 chr17 17471958 17472146 -72032407 - AluJo SINE Alu -26 286 95 335 149 60 0 chr17 17472175 17472242 -72032311 + L1MB7 LINE L1 6095 6165 -19 2553 47 7 0 chr17 17472326 17472623 -72031930 + AluY SINE Alu 2 300 -11 335 271 111 49 chr17 17472758 17472902 -72031651 + L1M4 LINE L1 4458 4610 -1536 22 70 0 0 chr17 17472906 17472949 -72031604 + AT_rich Low_complexity Low_complexity 1 43 0 378 320 29 23 chr17 17472964 17473136 -72031417 + L1M4 LINE L1 4570 4742 -1404 2370 86 3 0 chr17 17473136 17473428 -72031125 + AluSg SINE Alu 1 293 -17 266 330 12 53 chr17 17473565 17473749 -72030804 + L1MC4a LINE L1 4504 4669 -1477 2118 93 7 4 chr17 17473749 17474028 -72030525 + AluSx SINE Alu 1 280 -32 266 330 12 53 chr17 17474028 17474182 -72030371 + L1MC4a LINE L1 4669 4828 -1318 2192 104 0 4 chr17 17474358 17474671 -72029882 + AluSg SINE Alu 1 312 0 1602 163 3 74 chr17 17474734 17474899 -72029654 - AluJo SINE Alu -10 302 127 2276 95 3 38 chr17 17474899 17475216 -72029337 - AluSp SINE Alu -1 312 7 1602 163 3 74 chr17 17475216 17475227 -72029326 - AluJo SINE Alu -185 127 117 2442 73 0 3 chr17 17475227 17475527 -72029026 - AluY SINE Alu -12 299 1 1602 163 3 74 chr17 17475527 17475674 -72028879 - AluJo SINE Alu -195 117 1 2473 91 0 0 chr17 17475708 17476017 -72028536 + AluSg SINE Alu 1 309 -1 491 256 118 31 chr17 17476115 17476144 -72028409 + L1MC4a LINE L1 5573 5598 -2210 2281 99 10 16 chr17 17476144 17476457 -72028096 + AluSq SINE Alu 1 311 -2 491 256 118 31 chr17 17476457 17476716 -72027837 + L1MC4a LINE L1 5598 5886 -1922 1136 175 101 9 chr17 17476716 17476933 -72027620 + AluJo SINE Alu 3 239 -73 1371 149 193 28 chr17 17476952 17477112 -72027441 - AluSg SINE Alu -10 290 158 299 65 22 0 chr17 17477112 17477158 -72027395 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2061 126 7 7 chr17 17477158 17477443 -72027110 - AluSx SINE Alu -27 285 1 1371 149 193 28 chr17 17477443 17477530 -72027023 - AluSg SINE Alu -141 159 1 32 0 0 0 chr17 17477534 17477566 -72026987 + AT_rich Low_complexity Low_complexity 1 32 0 754 178 7 22 chr17 17477709 17477844 -72026709 - AluJo SINE Alu -178 134 2 2356 113 0 0 chr17 17477857 17478167 -72026386 - AluSx SINE Alu -1 311 2 26 0 0 0 chr17 17478167 17478193 -72026360 + AT_rich Low_complexity Low_complexity 1 26 0 914 171 49 6 chr17 17478610 17478774 -72025779 - FRAM SINE Alu -6 170 1 228 35 0 0 chr17 17478845 17478874 -72025679 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2242 83 11 0 chr17 17478874 17479152 -72025401 - AluSq SINE Alu -32 281 1 827 131 8 0 chr17 17479183 17479313 -72025240 + L1MB3 LINE L1 6008 6138 -45 1465 181 54 7 chr17 17479313 17479589 -72024964 + AluJo SINE Alu 1 289 -23 2464 95 0 0 chr17 17479799 17480104 -72024449 - AluSx SINE Alu -7 305 1 2277 114 0 3 chr17 17480104 17480402 -72024151 - AluSx SINE Alu -15 297 1 877 171 95 0 chr17 17480461 17480619 -72023934 - AluJb SINE Alu -2 310 138 21 0 0 0 chr17 17480726 17480747 -72023806 + AT_rich Low_complexity Low_complexity 1 21 0 1886 105 8 4 chr17 17481515 17481772 -72022781 - AluSp SINE Alu -13 300 43 805 138 9 0 chr17 17482213 17482329 -72022224 - FLAM_C SINE Alu -26 117 1 2138 103 0 7 chr17 17482935 17483253 -72021300 - AluSg SINE Alu 0 316 1 1431 54 0 43 chr17 17483296 17483471 -72021082 + AluY SINE Alu 134 302 -9 1599 155 8 8 chr17 17483471 17483716 -72020837 + AluJb SINE Alu 1 245 -67 1003 279 125 24 chr17 17484151 17484651 -72019902 + L1MC4a LINE L1 5322 5883 -1925 2323 93 7 0 chr17 17484651 17484940 -72019613 + AluSx SINE Alu 1 291 -21 1003 279 125 24 chr17 17484940 17484983 -72019570 + L1MC4a LINE L1 5883 5920 -1888 1831 175 3 3 chr17 17485024 17485333 -72019220 - AluJb SINE Alu 0 309 1 254 89 133 0 chr17 17485713 17485758 -72018795 - MER66B LTR ERV1 -141 345 295 312 248 53 44 chr17 17485768 17485881 -72018672 + L1ME4a LINE L1 5634 5747 -374 345 180 30 30 chr17 17486171 17486271 -72018282 + L1ME4a LINE L1 5963 6062 -59 2314 121 3 0 chr17 17486332 17486639 -72017914 - AluSx SINE Alu -4 308 1 332 275 117 0 chr17 17487937 17488057 -72016496 - L1MC5 LINE L1 -62 7899 7766 2100 122 7 0 chr17 17488527 17488822 -72015731 - AluSg SINE Alu -13 297 1 2354 82 7 0 chr17 17489120 17489413 -72015140 - AluSp SINE Alu -18 295 1 22 0 0 0 chr17 17491181 17491203 -72013350 + GC_rich Low_complexity Low_complexity 1 22 0 200 135 0 58 chr17 17491337 17491389 -72013164 + (CGG)n Simple_repeat Simple_repeat 1 49 0 23 54 0 0 chr17 17491530 17491567 -72012986 + GC_rich Low_complexity Low_complexity 1 37 0 38 22 0 0 chr17 17491650 17491695 -72012858 + GC_rich Low_complexity Low_complexity 1 45 0 202 173 0 39 chr17 17491713 17491765 -72012788 + (CCGCG)n Simple_repeat Simple_repeat 3 52 0 2306 99 3 6 chr17 17492272 17492586 -72011967 - AluSq SINE Alu 0 313 1 857 40 64 8 chr17 17492594 17492719 -72011834 - AluSc SINE Alu -1 308 177 1387 147 72 44 chr17 17492797 17492949 -72011604 - AluJo SINE Alu -7 305 159 183 42 0 0 chr17 17492949 17492973 -72011580 + (C)n Simple_repeat Simple_repeat 1 24 0 1387 147 72 44 chr17 17492973 17493113 -72011440 - AluJo SINE Alu -153 159 5 463 223 280 0 chr17 17493147 17493322 -72011231 - L1ME3 LINE L1 -14 6148 5925 853 168 17 89 chr17 17493339 17493518 -72011035 + FRAM SINE Alu 1 166 0 338 209 22 137 chr17 17493534 17493600 -72010953 + L1ME3 LINE L1 5975 6018 -144 2001 121 46 4 chr17 17493600 17493881 -72010672 + AluSg SINE Alu 1 293 -17 338 209 22 137 chr17 17493881 17493953 -72010600 + L1ME3 LINE L1 6018 6097 -65 2374 100 10 0 chr17 17493999 17494309 -72010244 + AluSp SINE Alu 1 313 0 2070 79 79 0 chr17 17494437 17494714 -72009839 + AluSq SINE Alu 1 299 -14 2193 120 0 10 chr17 17494716 17495024 -72009529 + AluSx SINE Alu 1 305 -7 820 229 29 12 chr17 17495253 17495493 -72009060 + L1M4 LINE L1 4615 4858 -1288 2290 92 3 0 chr17 17495493 17495805 -72008748 - AluSp SINE Alu 0 314 2 1974 133 9 43 chr17 17495815 17496138 -72008415 - AluSx SINE Alu 0 312 1 2440 89 7 0 chr17 17496192 17496496 -72008057 - AluSq SINE Alu -7 306 1 209 206 191 15 chr17 17496896 17496964 -72007589 + L2 LINE L2 3229 3308 -5 1955 140 0 14 chr17 17497047 17497365 -72007188 - AluSx SINE Alu 0 314 1 2267 109 7 0 chr17 17497406 17497700 -72006853 - AluSq SINE Alu -17 296 1 1300 181 47 43 chr17 17497817 17498093 -72006460 - AluJo SINE Alu -22 290 14 1756 147 73 0 chr17 17498093 17498365 -72006188 - AluSx SINE Alu -14 298 7 2206 119 0 0 chr17 17498379 17498699 -72005854 - AluSg SINE Alu 0 320 1 913 136 0 0 chr17 17499078 17499203 -72005350 - FRAM SINE Alu -14 162 38 1209 126 0 0 chr17 17499361 17499528 -72005025 + AluSq SINE Alu 132 298 -15 1090 121 73 47 chr17 17499541 17499614 -72004939 + L1MB4 LINE L1 5943 6013 -167 2261 99 3 0 chr17 17499614 17499922 -72004631 - AluSp SINE Alu 0 309 1 1090 121 73 47 chr17 17499922 17500079 -72004474 + L1MB4 LINE L1 6013 6180 0 1021 154 41 18 chr17 17500218 17500295 -72004258 + L1MB3 LINE L1 5930 6004 -179 2069 136 0 7 chr17 17500295 17500604 -72003949 - AluSx SINE Alu -5 307 1 1021 154 41 18 chr17 17500604 17500746 -72003807 + L1MB3 LINE L1 6004 6154 -29 2163 132 0 10 chr17 17500757 17501068 -72003485 - AluSx SINE Alu 0 312 5 1714 174 28 0 chr17 17501115 17501397 -72003156 - AluJb SINE Alu -22 290 1 2272 96 7 0 chr17 17501400 17501692 -72002861 - AluSp SINE Alu -19 294 1 202 256 209 0 chr17 17502441 17502527 -72002026 - MER91A DNA MER1_type 0 196 93 2865 124 28 6 chr17 17502541 17503007 -72001546 - MER31A LTR ERV1 -9 476 1 617 237 83 18 chr17 17503070 17503239 -72001314 - MIR SINE MIR -19 243 64 1151 123 0 0 chr17 17503591 17503745 -72000808 - AluSg/x SINE Alu -24 286 133 298 0 0 45 chr17 17503747 17503791 -72000762 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1978 120 0 31 chr17 17503791 17504082 -72000471 - AluSx SINE Alu -30 282 1 379 270 128 11 chr17 17504082 17504347 -72000206 - L1ME3 LINE L1 -222 5948 5646 1791 171 0 31 chr17 17504368 17504690 -71999863 + AluJb SINE Alu 1 312 0 2099 104 61 0 chr17 17504970 17505249 -71999304 + AluSg SINE Alu 1 296 -14 1507 203 11 7 chr17 17505281 17505562 -71998991 - AluJo SINE Alu -30 282 1 512 241 129 0 chr17 17505654 17505824 -71998729 - L1ME3 LINE L1 -504 5660 5469 675 222 24 8 chr17 17505829 17505955 -71998598 - FLAM_C SINE Alu -4 129 2 2103 120 10 0 chr17 17506023 17506322 -71998231 - AluSx SINE Alu -10 302 1 386 165 0 25 chr17 17506325 17506404 -71998149 - L1ME3 LINE L1 -1448 4698 4622 1541 213 10 19 chr17 17506415 17506725 -71997828 + AluJo SINE Alu 1 307 -5 2191 117 7 0 chr17 17506728 17507027 -71997526 + AluSp SINE Alu 1 301 -12 870 97 0 0 chr17 17507037 17507150 -71997403 + AluSx SINE Alu 1 113 -200 1608 70 35 9 chr17 17507150 17507380 -71997173 + MLT2A1 LTR ERVL 1 236 -208 1369 138 10 0 chr17 17507380 17507583 -71996970 - AluSg/x SINE Alu -14 296 92 1274 111 16 3 chr17 17507700 17507895 -71996658 + MLT2A1 LTR ERVL 216 475 -40 322 96 0 19 chr17 17507931 17507983 -71996570 + MLT2A2 LTR ERVL 403 453 0 1392 103 16 0 chr17 17507983 17508167 -71996386 + AluSx SINE Alu 107 293 -17 30 27 0 0 chr17 17508190 17508227 -71996326 + AT_rich Low_complexity Low_complexity 1 37 0 1196 238 28 35 chr17 17508334 17508506 -71996047 - L1ME1 LINE L1 -5 6161 5990 313 294 43 47 chr17 17508506 17508738 -71995815 - L1MA5 LINE L1 -296 6004 5773 2447 95 0 0 chr17 17508738 17509044 -71995509 - AluSc SINE Alu 0 309 4 192 40 0 0 chr17 17509046 17509071 -71995482 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2142 134 0 0 chr17 17509071 17509354 -71995199 - AluSx SINE Alu -29 283 1 313 294 43 47 chr17 17509354 17509372 -71995181 - L1MA5 LINE L1 -526 5774 5751 29 28 0 0 chr17 17509570 17509606 -71994947 + AT_rich Low_complexity Low_complexity 1 36 0 2446 96 0 3 chr17 17509653 17509966 -71994587 + AluSx SINE Alu 1 312 0 197 349 93 8 chr17 17510073 17510202 -71994351 + L2 LINE L2 2594 2733 -581 720 280 85 78 chr17 17510260 17510285 -71994268 - L2 LINE L2 -1 3312 3289 1790 159 32 38 chr17 17510285 17510599 -71993954 + AluJb SINE Alu 1 312 0 720 280 85 78 chr17 17510599 17510777 -71993776 - L2 LINE L2 -24 3289 3114 2363 65 0 26 chr17 17510777 17511083 -71993470 - AluY SINE Alu -13 298 1 1533 164 13 80 chr17 17511085 17511397 -71993156 - AluSg SINE Alu -19 291 1 720 280 85 78 chr17 17511397 17511649 -71992904 - L2 LINE L2 -199 3114 2850 316 222 192 0 chr17 17511942 17512041 -71992512 - MIR SINE MIR -4 258 141 2129 117 0 7 chr17 17512054 17512362 -71992191 + AluSx SINE Alu 12 317 0 250 217 50 0 chr17 17512368 17512428 -71992125 - MIR SINE MIR -59 203 141 191 281 169 11 chr17 17512467 17512556 -71991997 + L2 LINE L2 3170 3272 0 364 304 0 20 chr17 17512761 17512863 -71991690 + L1MC4 LINE L1 6604 6703 -1339 1955 126 4 4 chr17 17512924 17513195 -71991358 - AluSx SINE Alu -38 274 4 1524 155 4 9 chr17 17513224 17513456 -71991097 - AluJb SINE Alu -81 231 1 183 302 0 0 chr17 17513659 17513702 -71990851 - MIR3 SINE MIR -47 161 119 1386 133 15 41 chr17 17513703 17513721 -71990832 + L1MB2 LINE L1 5812 5829 -342 2125 117 3 38 chr17 17513721 17514037 -71990516 + AluSg SINE Alu 1 305 -5 1386 133 15 41 chr17 17514037 17514100 -71990453 + L1MB2 LINE L1 5829 5892 -279 1882 163 3 13 chr17 17514100 17514407 -71990146 + AluJb SINE Alu 3 306 -6 1386 133 15 41 chr17 17514407 17514595 -71989958 + L1MB2 LINE L1 5892 6075 -96 2373 56 0 11 chr17 17514596 17514911 -71989642 + AluY SINE Alu 1 312 0 2202 94 9 41 chr17 17514912 17515231 -71989322 - AluSq SINE Alu -4 309 1 825 194 50 22 chr17 17515326 17515506 -71989047 + AluJo SINE Alu 127 311 -1 2134 133 0 0 chr17 17515530 17515824 -71988729 - AluSx SINE Alu -10 302 9 241 216 118 0 chr17 17516315 17516366 -71988187 - L2 LINE L2 -1 3271 3215 1464 164 52 14 chr17 17517512 17517645 -71986908 + AluJo SINE Alu 2 128 -184 2238 111 3 3 chr17 17517645 17517951 -71986602 + AluSx SINE Alu 1 306 -6 1464 164 52 14 chr17 17517951 17518103 -71986450 + AluJo SINE Alu 128 298 -14 2272 93 3 7 chr17 17518128 17518429 -71986124 - AluSg1 SINE Alu -9 300 1 835 50 0 10 chr17 17518536 17518636 -71985917 + AluSq/x SINE Alu 35 133 -180 1881 94 4 0 chr17 17520883 17521128 -71983425 + AluSc SINE Alu 39 284 -25 434 198 81 0 chr17 17521143 17521229 -71983324 - FRAM SINE Alu -25 151 59 1903 116 54 0 chr17 17521631 17521907 -71982646 - AluSx SINE Alu -21 291 1 824 187 166 6 chr17 17522468 17522859 -71981694 + MER21B LTR ERV1 20 492 -371 576 164 90 8 chr17 17522860 17522982 -71981571 + AluJb SINE Alu 2 133 -179 1208 179 56 96 chr17 17522991 17523293 -71981260 + AluSx SINE Alu 5 294 -8 22 0 0 0 chr17 17523406 17523428 -71981125 + AT_rich Low_complexity Low_complexity 1 22 0 847 166 90 0 chr17 17523428 17523573 -71980980 - FRAM SINE Alu -23 153 1 2319 84 7 3 chr17 17523593 17523902 -71980651 - AluSx SINE Alu -2 310 1 2308 91 0 3 chr17 17523902 17524199 -71980354 - AluY SINE Alu -14 297 2 802 158 8 8 chr17 17524239 17524372 -71980181 + AluJo SINE Alu 3 135 -177 435 59 0 0 chr17 17524372 17524423 -71980130 + AluSp/q SINE Alu 200 250 -63 1243 148 0 48 chr17 17524423 17524653 -71979900 + AluJo SINE Alu 85 303 -9 313 145 0 66 chr17 17524935 17525011 -71979542 + AluJ/FRAM SINE Alu 231 301 -1 2195 28 0 0 chr17 17525030 17525279 -71979274 + AluY SINE Alu 1 249 -62 210 37 0 0 chr17 17525379 17525406 -71979147 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2491 84 0 7 chr17 17525417 17525727 -71978826 + AluSq SINE Alu 1 308 -5 291 183 0 0 chr17 17525940 17526000 -71978553 - L1ME4a LINE L1 -2 6119 6060 381 284 124 20 chr17 17526284 17526333 -71978220 - L1MB8 LINE L1 -237 5941 5893 823 239 57 17 chr17 17526333 17526630 -71977923 - L1MC4a LINE L1 -1946 5862 5554 285 44 44 0 chr17 17526625 17526670 -71977883 + L1M3 LINE L1 5783 5829 -351 * 2301 74 14 14 chr17 17526713 17527009 -71977544 + AluSc SINE Alu 3 298 -11 2265 113 0 7 chr17 17527011 17527311 -71977242 + AluSx SINE Alu 2 299 -13 1135 82 6 31 chr17 17527311 17527470 -71977083 + AluSq SINE Alu 83 237 -76 929 196 12 6 chr17 17728820 17730345 -71774208 + ALR/Alpha Satellite centromeric 1 1534 -26 1131 156 6 0 chr17 17730447 17737099 -71767454 - ALR/Alpha Satellite centromeric 0 6692 1 1131 160 8 1 chr17 17737199 17752985 -71751568 - ALR/Alpha Satellite centromeric 0 15893 1 948 173 4 2 chr17 17753087 17755822 -71748731 - ALR/Alpha Satellite centromeric 0 2742 1 6824 64 11 41 chr17 17755842 17757552 -71747001 - SVA Other Other -683 1386 1 982 166 8 2 chr17 17757554 17759281 -71745272 - ALR/Alpha Satellite centromeric 0 1738 1 1019 168 5 2 chr17 17759383 17767399 -71737154 - ALR/Alpha Satellite centromeric 0 8045 1 917 173 2 3 chr17 17767410 17768243 -71736310 - ALR/Alpha Satellite centromeric -2 832 1 14864 46 7 1 chr17 17768243 17770873 -71733680 + L1PA4 LINE L1 3511 6146 -9 230 243 35 14 chr17 17770873 17771017 -71733536 + (TTATA)n Simple_repeat Simple_repeat 4 150 0 1077 161 3 1 chr17 17771860 17775178 -71729375 - ALR/Alpha Satellite centromeric 0 3324 1 826 196 2 16 chr17 17775282 17776305 -71728248 - ALR/Alpha Satellite centromeric -1 1008 1 10730 34 0 0 chr17 17776305 17777673 -71726880 - L1P LINE L1 -1875 4271 2904 364 220 164 13 chr17 17778387 17778546 -71726007 + L1MC4 LINE L1 7444 7626 -416 1101 159 9 4 chr17 17778546 17778935 -71725618 - ALR/Alpha Satellite centromeric -6 390 1 936 283 158 18 chr17 17779059 17779667 -71724886 - L2 LINE L2 -2027 1287 595 2038 184 32 117 chr17 17779730 17780328 -71724225 - MER7C DNA MER2_type -55 547 1 332 268 143 62 chr17 17780338 17780610 -71723943 - L2 LINE L2 -2802 512 219 547 117 0 0 chr17 17781031 17781108 -71723445 - AluSc SINE Alu -12 297 221 353 293 16 16 chr17 17781592 17781715 -71722838 - L2 LINE L2 -55 3258 3136 701 216 8 0 chr17 17781718 17781843 -71722710 + FLAM_C SINE Alu 5 130 -13 289 249 147 102 chr17 17782027 17782204 -71722349 + MER5A DNA MER1_type 3 187 -2 386 258 23 23 chr17 17782280 17782412 -71722141 + L2 LINE L2 2927 3058 -214 311 305 12 10 chr17 17782748 17782868 -71721685 + MIR SINE MIR 33 152 -65 25 31 0 0 chr17 17783963 17783995 -71720558 + AT_rich Low_complexity Low_complexity 1 32 0 310 229 184 87 chr17 17784328 17784546 -71720007 - MLT1L LTR MaLR -225 390 152 404 323 39 8 chr17 17784733 17784863 -71719690 - L2 LINE L2 -2 3270 3137 397 306 6 12 chr17 17785000 17785160 -71719393 - L1ME LINE L1 -324 5797 5639 493 303 0 0 chr17 17785168 17785290 -71719263 + FLAM_A SINE Alu 2 123 -10 279 244 0 0 chr17 17785342 17785457 -71719096 + (CAT)n Simple_repeat Simple_repeat 1 115 0 687 106 5 80 chr17 17785479 17785667 -71718886 + (CACCAT)n Simple_repeat Simple_repeat 6 179 0 570 229 0 0 chr17 17785677 17785856 -71718697 + (CAT)n Simple_repeat Simple_repeat 1 179 0 229 296 145 69 chr17 17786528 17786832 -71717721 + L2 LINE L2 2578 2904 -410 311 281 31 0 chr17 17788172 17788268 -71716285 - MIR SINE MIR -66 142 44 345 186 0 0 chr17 17788281 17788340 -71716213 + MIR SINE MIR 61 119 -89 375 241 146 63 chr17 17788460 17788618 -71715935 - MIR SINE MIR -63 145 12 444 219 0 0 chr17 17789042 17789165 -71715388 + (TGGA)n Simple_repeat Simple_repeat 3 125 0 574 245 94 43 chr17 17790036 17790269 -71714284 - MIR SINE MIR -1 261 17 567 226 39 32 chr17 17790272 17790427 -71714126 + MIR SINE MIR 8 163 -99 2100 101 3 14 chr17 17791056 17791383 -71713170 - AluY SINE Alu 0 311 1 231 201 394 50 chr17 17795219 17795498 -71709055 + L2 LINE L2 2361 2735 -579 1931 198 24 46 chr17 17795787 17796283 -71708270 - L1MA8 LINE L1 -25 6968 6484 317 234 80 7 chr17 17796450 17796587 -71707966 - L1MA8 LINE L1 -816 6032 5886 878 226 141 7 chr17 17796593 17796890 -71707663 - L1MA8 LINE L1 -1082 5766 5430 416 262 48 8 chr17 17796903 17797029 -71707524 - L1MA8 LINE L1 -4311 2538 2408 400 263 177 27 chr17 17797035 17797273 -71707280 - L1M3 LINE L1 -391 5771 5509 914 266 38 42 chr17 17797301 17797725 -71706828 - L1ME1 LINE L1 -4 6162 5741 * 1170 253 72 75 chr17 17797721 17798605 -71705948 - L1M3 LINE L1 -815 5331 4450 293 287 0 32 chr17 17798615 17798709 -71705844 - L1M3 LINE L1 -1796 4350 4260 640 345 36 33 chr17 17798768 17799224 -71705329 + L1MA8 LINE L1 1 1658 -5838 1910 281 35 27 chr17 17799309 17800330 -71704223 + L1MA8 LINE L1 2213 3255 -4311 1611 247 57 14 chr17 17800343 17800927 -71703626 + L1MA8 LINE L1 6147 6755 -810 1925 197 8 50 chr17 17801083 17801585 -71702968 + L1MA8 LINE L1 7195 7675 -35 296 191 407 33 chr17 17801883 17802156 -71702397 - L2 LINE L2 -579 2735 2361 250 287 93 28 chr17 17802517 17802625 -71701928 + MIR SINE MIR 31 145 -63 382 315 35 35 chr17 17804793 17805082 -71699471 - SST1 Satellite centromeric -961 602 314 665 304 102 33 chr17 17805762 17806398 -71698155 - SST1 Satellite centromeric -847 716 37 1021 189 10 16 chr17 17806425 17807613 -71696940 + ALR/Alpha Satellite centromeric 1 1194 -1241 2179 105 3 13 chr17 17807613 17807926 -71696627 + AluSp SINE Alu 2 311 -2 1021 189 10 16 chr17 17807926 17808856 -71695697 + ALR/Alpha Satellite centromeric 1194 2417 -18 964 198 12 4 chr17 17808964 17810271 -71694282 + ALR/Alpha Satellite centromeric 1 1318 -83 1022 198 7 7 chr17 17810378 17815775 -71688778 + ALR/Alpha Satellite centromeric 1 5398 -1 740 222 12 33 chr17 17815878 17816377 -71688176 + ALR/Alpha Satellite centromeric 1 488 -10 976 194 8 9 chr17 17816392 17816446 -71688107 + ALR/Alpha Satellite centromeric 1 54 -4038 2314 100 0 0 chr17 17816446 17816746 -71687807 + AluY SINE Alu 2 301 -10 976 194 8 9 chr17 17816746 17820455 -71684098 + ALR/Alpha Satellite centromeric 54 4058 -34 1002 200 8 6 chr17 17820568 17823822 -71680731 + ALR/Alpha Satellite centromeric 1 3261 0 976 198 0 0 chr17 17823836 17824136 -71680417 + ALR/Alpha Satellite centromeric 1 300 -31 294 98 0 0 chr17 17824767 17824818 -71679735 + (CA)n Simple_repeat Simple_repeat 2 52 0 571 291 110 71 chr17 17824866 17826218 -71678335 - SST1 Satellite centromeric -27 1536 132 257 293 64 13 chr17 17827375 17827532 -71677021 - SST1 Satellite centromeric -9 1554 1390 432 304 99 38 chr17 17827722 17828308 -71676245 - SST1 Satellite centromeric -810 753 132 917 198 3 8 chr17 17828418 17829856 -71674697 + ALR/Alpha Satellite centromeric 1 1430 -48 874 202 9 12 chr17 17829994 17835127 -71669426 + ALR/Alpha Satellite centromeric 1 5418 -515 2403 92 0 3 chr17 17835127 17835431 -71669122 + AluY SINE Alu 1 303 -8 874 202 9 12 chr17 17835431 17835896 -71668657 + ALR/Alpha Satellite centromeric 5418 5883 -50 24 0 0 0 chr17 17888445 17888469 -71616084 + AT_rich Low_complexity Low_complexity 1 24 0 222 62 0 0 chr17 17889440 17889472 -71615081 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 831 192 0 7 chr17 17889625 17889771 -71614782 + FRAM SINE Alu 2 146 -30 223 216 119 172 chr17 17889781 17889915 -71614638 + MER5B DNA MER1_type 50 176 -2 319 274 65 32 chr17 17890062 17890186 -71614367 + L1MB1 LINE L1 4966 5093 -1053 22 94 0 0 chr17 17890204 17890268 -71614285 + AT_rich Low_complexity Low_complexity 1 64 0 4026 180 54 18 chr17 17890284 17890945 -71613608 + L1MB1 LINE L1 5266 5967 -201 2399 63 7 3 chr17 17890945 17891246 -71613307 + AluY SINE Alu 1 302 -9 4026 180 54 18 chr17 17891246 17891456 -71613097 + L1MB1 LINE L1 5967 6168 0 511 292 29 0 chr17 17891453 17891747 -71612806 + L1ME3 LINE L1 5191 5493 -669 * 763 134 0 17 chr17 17891748 17891867 -71612686 + FRAM SINE Alu 41 157 -19 1430 271 45 37 chr17 17891885 17892531 -71612022 + L1ME3 LINE L1 5495 6145 -17 387 234 201 33 chr17 17892572 17892756 -71611797 + L2 LINE L2 2522 2736 -578 740 208 19 16 chr17 17892880 17893339 -71611214 + ALR/Alpha Satellite centromeric 1 460 -18 929 191 0 0 chr17 17893382 17893539 -71611014 + AluJb SINE Alu 137 293 -19 2016 133 0 3 chr17 17893542 17893860 -71610693 + AluY SINE Alu 1 317 0 4668 176 34 10 chr17 17893865 17894805 -71609748 - L1MC2 LINE L1 -21 6323 5361 283 280 96 57 chr17 17895319 17895476 -71609077 - MIR SINE MIR -88 174 12 2003 142 3 3 chr17 17896125 17896428 -71608125 - AluSg SINE Alu -7 303 1 2158 99 3 0 chr17 17896763 17897083 -71607470 - AluSp SINE Alu 0 321 1 390 293 49 62 chr17 17897674 17897899 -71606654 + MIR SINE MIR 41 262 0 21 57 0 0 chr17 17897937 17897972 -71606581 + AT_rich Low_complexity Low_complexity 1 35 0 2616 87 30 5 chr17 17898147 17898515 -71606038 - L1PA7 LINE L1 -14 6140 5764 1317 263 96 27 chr17 17899269 17899707 -71604846 + LTR40a LTR ERVL 1 468 -51 360 0 0 0 chr17 17899743 17899783 -71604770 + (TA)n Simple_repeat Simple_repeat 2 41 0 252 0 0 0 chr17 17900690 17900718 -71603835 + (TA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr17 17901591 17901614 -71602939 + AT_rich Low_complexity Low_complexity 1 23 0 7568 26 0 0 chr17 17901729 17903191 -71601362 - L1PA2 LINE L1 0 6155 4690 * 19528 34 2 1 chr17 17903188 17906344 -71598209 + L1PA3 LINE L1 2994 6150 -5 867 230 126 44 chr17 17906564 17906881 -71597672 - MLT1A2 LTR MaLR -47 343 1 * 948 184 39 30 chr17 17906881 17907114 -71597439 + Charlie1b DNA MER1_type 97 331 -192 1720 260 69 57 chr17 17907132 17907235 -71597318 + L1M4 LINE L1 3154 3254 -2892 2043 133 7 0 chr17 17907235 17907529 -71597024 + AluSq SINE Alu 3 298 -15 1720 260 69 57 chr17 17907529 17908409 -71596144 + L1M4 LINE L1 3254 4149 -1997 572 226 151 14 chr17 17908422 17908442 -71596111 + L1M4 LINE L1 4349 4365 -1781 1310 202 10 46 chr17 17908442 17908744 -71595809 + AluJo SINE Alu 1 291 -11 572 226 151 14 chr17 17908744 17908935 -71595618 + L1M4 LINE L1 4365 4589 -1557 473 254 65 82 chr17 17909786 17910418 -71594135 + HSREP522 Satellite telomeric 1 621 -388 217 303 16 16 chr17 17911618 17911740 -71592813 + CT-rich Low_complexity Low_complexity 2 123 0 847 108 69 0 chr17 17911900 17912030 -71592523 - MER85 DNA T2_type 0 139 1 1145 205 29 36 chr17 17913060 17913338 -71591215 + LOR1-int LTR ERV1 2079 2354 -3592 876 129 75 20 chr17 17913337 17913538 -71591015 + LOR1-int LTR ERV1 1839 2050 -6070 * 2133 184 61 4 chr17 17913547 17914020 -71590533 + LOR1-int LTR ERV1 2731 3230 -2716 1662 222 13 33 chr17 17914900 17915360 -71589193 + L1MB8 LINE L1 4132 4582 -1564 2120 205 45 53 chr17 17915360 17916063 -71588490 + L1MB8 LINE L1 4852 6178 0 2560 121 27 20 chr17 17916107 17916555 -71587998 - L1PB1 LINE L1 -3 6148 5698 33 25 0 0 chr17 17916811 17916851 -71587702 + AT_rich Low_complexity Low_complexity 1 40 0 738 211 0 32 chr17 17917660 17917816 -71586737 + MLT2B3 LTR ERVL 384 534 -20 333 147 0 67 chr17 17917820 17917846 -71586707 + Ricksha DNA DNA 840 866 -2380 279 0 0 0 chr17 17917846 17917877 -71586676 + (CA)n Simple_repeat Simple_repeat 2 32 0 333 147 0 67 chr17 17917877 17917925 -71586628 + Ricksha DNA DNA 866 909 -2337 959 247 121 53 chr17 17918229 17918609 -71585944 + MLT2B1 LTR ERVL 113 518 -2 24 67 0 0 chr17 17919419 17919464 -71585089 + AT_rich Low_complexity Low_complexity 1 45 0 473 296 30 56 chr17 17919574 17919807 -71584746 + MLT1E LTR MaLR 30 256 -337 505 180 20 20 chr17 17919870 17919970 -71584583 + MLT1E1 LTR MaLR 504 603 -51 25 31 0 0 chr17 17920000 17920032 -71584521 + AT_rich Low_complexity Low_complexity 1 32 0 1385 209 20 26 chr17 17920441 17920747 -71583806 + AluJo SINE Alu 1 304 -8 2048 115 11 0 chr17 17920908 17921218 -71583335 + AluSg SINE Alu 1 313 0 23 0 0 0 chr17 17921927 17921950 -71582603 + AT_rich Low_complexity Low_complexity 1 23 0 368 265 87 39 chr17 17923127 17923359 -71581194 - LTR33A LTR ERVL -176 347 66 21 0 0 0 chr17 17923835 17923856 -71580697 + AT_rich Low_complexity Low_complexity 1 21 0 7550 26 0 1 chr17 17923856 17925427 -71579126 - L1PA3 LINE L1 -8 6147 4579 11764 34 1 1 chr17 17925427 17926853 -71577700 + L1PA3 LINE L1 3177 4602 -1544 376 190 10 20 chr17 17928447 17928547 -71576006 + CT-rich Low_complexity Low_complexity 1 99 0 714 161 42 0 chr17 17932266 17932384 -71572169 + FLAM_C SINE Alu 1 123 -20 650 64 56 36 chr17 17932386 17932738 -71571815 + (TA)n Simple_repeat Simple_repeat 1 358 0 1583 123 16 118 chr17 17932941 17933314 -71571239 - MER1B DNA MER1_type 0 337 3 29 0 0 0 chr17 17933758 17933787 -71570766 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr17 17933841 17933869 -71570684 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 17933892 17933921 -71570632 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr17 17934777 17934801 -71569752 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr17 17934960 17934983 -71569570 + AT_rich Low_complexity Low_complexity 1 23 0 253 318 65 55 chr17 17935032 17935249 -71569304 - MIR SINE MIR -26 236 18 323 310 184 0 chr17 17935920 17936078 -71568475 + MIR SINE MIR 48 234 -28 223 288 14 27 chr17 17937653 17937799 -71566754 + (TTATA)n Simple_repeat Simple_repeat 3 146 0 389 156 0 0 chr17 17937800 17937864 -71566689 - MLT2B2 LTR ERVL -451 64 1 243 0 0 0 chr17 17938078 17938105 -71566448 + (T)n Simple_repeat Simple_repeat 1 27 0 240 377 8 8 chr17 17938459 17938581 -71565972 + Charlie8 DNA MER1_type 126 247 -2170 1138 188 17 77 chr17 17938737 17939024 -71565529 - AluJo SINE Alu -32 280 11 2175 74 40 10 chr17 17939477 17939774 -71564779 - AluYa5 SINE Alu -5 306 1 2230 79 3 0 chr17 17940775 17941066 -71563487 - AluY SINE Alu -1 310 19 698 64 0 0 chr17 17941796 17941890 -71562663 + AluY SINE Alu 217 310 -1 4000 175 12 33 chr17 17942594 17943440 -71561113 - L1MA7 LINE L1 -5 6286 5459 609 195 132 42 chr17 17943548 17943738 -71560815 - L1MA7 LINE L1 -933 5213 5007 223 217 0 0 chr17 17943756 17943802 -71560751 + L3 LINE CR1 1530 1575 -2 24 0 0 0 chr17 17946497 17946521 -71558032 + AT_rich Low_complexity Low_complexity 1 24 0 30 69 0 0 chr17 17946623 17946681 -71557872 + AT_rich Low_complexity Low_complexity 1 58 0 21 0 0 0 chr17 17953567 17953588 -71550965 + AT_rich Low_complexity Low_complexity 1 21 0 7212 51 0 0 chr17 17956146 17957045 -71547508 - L1P LINE L1 -1111 5035 4137 488 291 55 25 chr17 17957046 17957245 -71547308 + L2 LINE L2 3109 3313 0 219 260 14 0 chr17 17957562 17957635 -71546918 + T-rich Low_complexity Low_complexity 2 75 0 21 0 0 0 chr17 17957853 17957874 -71546679 + AT_rich Low_complexity Low_complexity 1 21 0 1966 202 53 29 chr17 17958581 17959138 -71545415 + L1MB4 LINE L1 5710 6171 -9 357 125 0 0 chr17 17959141 17959197 -71545356 + (CA)n Simple_repeat Simple_repeat 2 57 0 270 225 56 0 chr17 17959198 17959287 -71545266 + (TA)n Simple_repeat Simple_repeat 2 95 0 308 200 0 105 chr17 17959297 17959392 -71545161 - MLT1C LTR MaLR -330 137 53 7595 30 0 0 chr17 17959588 17960619 -71543934 + L1PA3 LINE L1 5118 6155 0 234 188 0 0 chr17 17960630 17960678 -71543875 + A-rich Low_complexity Low_complexity 1 48 0 1440 239 68 14 chr17 17961064 17961236 -71543317 - MLT1A2 LTR MaLR -4 370 209 366 42 0 0 chr17 17961236 17961284 -71543269 + (GA)n Simple_repeat Simple_repeat 2 49 0 1440 239 68 14 chr17 17961284 17961462 -71543091 - MLT1A2 LTR MaLR -165 209 1 848 253 150 22 chr17 17961700 17961760 -71542793 - MLT1C LTR MaLR -3 464 413 258 32 0 0 chr17 17961760 17961791 -71542762 + (TAA)n Simple_repeat Simple_repeat 2 32 0 848 253 150 22 chr17 17961791 17962097 -71542456 - MLT1C LTR MaLR -54 413 51 22 70 0 0 chr17 17962998 17963041 -71541512 + AT_rich Low_complexity Low_complexity 1 43 0 31 68 0 0 chr17 17964348 17964407 -71540146 + AT_rich Low_complexity Low_complexity 1 59 0 23 0 0 0 chr17 17964601 17964624 -71539929 + AT_rich Low_complexity Low_complexity 1 23 0 654 286 17 0 chr17 17964691 17964869 -71539684 + MIR SINE MIR 58 238 -24 29 47 0 0 chr17 17964871 17964914 -71539639 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr17 17964980 17965008 -71539545 + AT_rich Low_complexity Low_complexity 1 28 0 266 210 0 32 chr17 17965930 17965992 -71538561 - L2 LINE L2 0 3313 3254 949 261 44 41 chr17 17966501 17966819 -71537734 + L1MCa LINE L1 7 325 -6101 907 278 20 12 chr17 17966823 17967165 -71537388 + L1MCa LINE L1 2566 2910 -3516 390 275 18 18 chr17 17967229 17967338 -71537215 + MER5B DNA MER1_type 64 172 -6 25 51 0 0 chr17 17967473 17967512 -71537041 + AT_rich Low_complexity Low_complexity 1 39 0 380 80 16 277 chr17 17967533 17967721 -71536832 + L1MA8 LINE L1 6010 6148 -143 21 57 0 0 chr17 17968479 17968514 -71536039 + AT_rich Low_complexity Low_complexity 1 35 0 2053 133 0 0 chr17 17969293 17969628 -71534925 + AluSq SINE Alu 1 313 0 21 36 0 0 chr17 17971140 17971168 -71533385 + AT_rich Low_complexity Low_complexity 1 28 0 681 293 43 34 chr17 17971682 17972034 -71532519 - L1ME1 LINE L1 -2 6164 5810 * 4046 217 62 13 chr17 17972033 17973309 -71531244 - L1MC2 LINE L1 -8 6336 4901 1427 271 73 44 chr17 17973330 17974146 -71530407 - L1ME1 LINE L1 -363 5803 4967 23 33 0 0 chr17 17974160 17974190 -71530363 + AT_rich Low_complexity Low_complexity 1 30 0 1557 75 4 18 chr17 17974631 17974858 -71529695 - L1PA6 LINE L1 -7 6147 5924 1967 93 14 4 chr17 17975467 17975774 -71528779 - AluY SINE Alu 0 310 1 24 77 0 0 chr17 17975909 17975961 -71528592 + AT_rich Low_complexity Low_complexity 1 52 0 272 203 0 0 chr17 17976159 17976223 -71528330 + L1MA2 LINE L1 6241 6304 0 2916 97 0 35 chr17 17976353 17976817 -71527736 - LTR7 LTR ERV1 -2 448 1 819 142 0 0 chr17 17977508 17977635 -71526918 - AluSg/x SINE Alu -18 292 166 2374 128 3 10 chr17 17977725 17978109 -71526444 - L1PA13 LINE L1 -6 6157 5777 217 228 33 11 chr17 17978188 17978280 -71526273 + (TAGA)n Simple_repeat Simple_repeat 2 95 0 235 250 11 11 chr17 17978299 17978387 -71526166 - L1MC4 LINE L1 -1340 6702 6615 457 214 0 16 chr17 17978397 17978579 -71525974 + (TA)n Simple_repeat Simple_repeat 1 179 0 180 27 81 0 chr17 17978601 17978638 -71525915 + (TCTA)n Simple_repeat Simple_repeat 4 43 0 1200 280 81 41 chr17 17978670 17979100 -71525453 + L1ME3A LINE L1 2292 2703 -3443 508 29 29 0 chr17 17979100 17979170 -71525383 + (TAGA)n Simple_repeat Simple_repeat 1 72 0 1200 280 81 41 chr17 17979170 17979909 -71524644 + L1ME3A LINE L1 2703 3508 -2638 560 277 100 59 chr17 17979986 17980615 -71523938 + L1ME3A LINE L1 4422 5076 -1070 1423 175 34 20 chr17 17980841 17981133 -71523420 + AluJb SINE Alu 1 296 -16 22 56 0 0 chr17 17981207 17981243 -71523310 + AT_rich Low_complexity Low_complexity 1 36 0 323 325 84 40 chr17 17981264 17981513 -71523040 + L1ME3A LINE L1 5417 5676 -494 221 200 0 36 chr17 17981513 17981568 -71522985 + (TATG)n Simple_repeat Simple_repeat 3 55 0 277 301 53 15 chr17 17981577 17981710 -71522843 + L1ME3A LINE L1 5657 5794 -376 310 316 92 31 chr17 17981750 17981946 -71522607 + L1ME3A LINE L1 5963 6170 0 444 322 62 5 chr17 17981988 17982196 -71522357 + MIR SINE MIR 32 251 -11 21 57 0 0 chr17 17982196 17982231 -71522322 + AT_rich Low_complexity Low_complexity 1 35 0 180 399 22 29 chr17 17982561 17982699 -71521854 - L2 LINE L2 -209 3063 2927 297 0 0 0 chr17 17982898 17982931 -71521622 + (CA)n Simple_repeat Simple_repeat 2 34 0 1259 256 55 39 chr17 17983962 17984474 -71520079 + L1ME3A LINE L1 5651 6170 0 1689 189 7 0 chr17 17984528 17984835 -71519718 + AluJb SINE Alu 4 312 0 251 106 21 21 chr17 17984976 17985023 -71519530 - HERVL LTR ERVL -3762 1892 1846 517 375 37 17 chr17 17985132 17985540 -71519013 - HERVL LTR ERVL -4011 1753 1338 224 333 0 12 chr17 17986256 17986337 -71518216 + L2 LINE L2 3234 3313 0 198 262 49 0 chr17 17986441 17986502 -71518051 - L2 LINE L2 -1497 1817 1754 421 66 16 0 chr17 17986574 17986635 -71517918 - L1MA9 LINE L1 -167 6145 6084 245 318 88 0 chr17 17989067 17989237 -71515316 + L1M4 LINE L1 3805 3989 -2157 1680 201 54 44 chr17 17989807 17990216 -71514337 + MSTC LTR MaLR 16 428 0 1015 368 49 76 chr17 17990703 17991097 -71513456 + L2 LINE L2 1345 1748 -1566 687 78 10 0 chr17 17991097 17991200 -71513353 - L1PA13 LINE L1 0 6163 6060 1015 368 49 76 chr17 17991200 17991858 -71512695 + L2 LINE L2 1748 2369 -945 1085 121 0 0 chr17 17991860 17992009 -71512544 - AluY SINE Alu -162 149 1 190 27 0 81 chr17 17992936 17992973 -71511580 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 750 231 160 53 chr17 17993427 17993764 -71510789 + MLT1A2 LTR MaLR 2 374 0 2133 97 10 0 chr17 17994136 17994424 -71510129 - AluSq SINE Alu -22 291 1 1286 176 81 18 chr17 17994523 17994795 -71509758 + MER7A DNA MER2_type 4 290 -56 1226 139 23 19 chr17 17994790 17995006 -71509547 + MER67C LTR ERV1 494 710 0 * 22 0 0 0 chr17 17995420 17995442 -71509111 + AT_rich Low_complexity Low_complexity 1 22 0 195 400 88 0 chr17 17996430 17996555 -71507998 + L2 LINE L2 3137 3272 0 265 177 42 21 chr17 17996559 17996655 -71507898 + (TA)n Simple_repeat Simple_repeat 2 99 0 207 69 0 0 chr17 17996658 17996687 -71507866 + (CA)n Simple_repeat Simple_repeat 2 30 0 2102 129 0 13 chr17 17997634 17997944 -71506609 - AluSx SINE Alu -6 306 1 30 27 0 0 chr17 17997952 17997989 -71506564 + AT_rich Low_complexity Low_complexity 1 37 0 237 358 30 15 chr17 17998054 17998188 -71506365 + L2 LINE L2 2231 2366 -948 572 227 17 160 chr17 17998238 17998476 -71506077 - MER20 DNA MER1_type -15 204 1 186 182 23 23 chr17 17998946 17998990 -71505563 + MIR SINE MIR 216 259 -3 22 56 0 0 chr17 17999928 17999964 -71504589 + AT_rich Low_complexity Low_complexity 1 36 0 301 295 0 0 chr17 18001162 18001223 -71503330 + MER45 DNA AcHobo 12 72 -1509 422 233 44 0 chr17 18001515 18001605 -71502948 + MER58B DNA MER1_type 245 338 -3 387 238 67 113 chr17 18001752 18001992 -71502561 + MLT1C LTR MaLR 8 236 -231 704 266 49 45 chr17 18002015 18002282 -71502271 + MLT1C LTR MaLR 192 459 -8 243 103 0 0 chr17 18003711 18003750 -71500803 + (TG)n Simple_repeat Simple_repeat 2 40 0 2322 70 3 19 chr17 18004373 18004686 -71499867 - AluY SINE Alu -3 308 1 734 86 138 0 chr17 18005104 18005220 -71499333 + MER39 LTR ERV1 1 132 -575 2091 132 81 51 chr17 18005220 18005629 -71498924 - MER4B LTR ERV1 -186 424 4 566 193 187 36 chr17 18005650 18005816 -71498737 + MER34C LTR ERV1 4 194 -391 3173 159 40 10 chr17 18005818 18005840 -71498713 + LTR49 LTR ERV1 1 21 -574 1693 170 43 32 chr17 18005840 18006211 -71498342 - THE1C LTR MaLR 0 375 1 3173 159 40 10 chr17 18006211 18006766 -71497787 + LTR49 LTR ERV1 21 595 0 266 220 127 17 chr17 18006815 18006933 -71497620 + LTR48 LTR ERV1 356 486 -301 318 219 101 17 chr17 18006965 18007084 -71497469 + LTR48 LTR ERV1 609 737 -50 1577 198 52 6 chr17 18007254 18007582 -71496971 + MER61A LTR ERV1 1 343 0 991 159 6 0 chr17 18007622 18007779 -71496774 + AluJo SINE Alu 12 169 -143 577 274 84 26 chr17 18007990 18008180 -71496373 - MER67D LTR ERV1 -8 506 306 1191 239 6 61 chr17 18008227 18008554 -71495999 - MER67D LTR ERV1 -203 311 3 3720 101 18 2 chr17 18008587 18009132 -71495421 + MER41A LTR ERV1 1 554 0 23 54 0 0 chr17 18010446 18010483 -71494070 + AT_rich Low_complexity Low_complexity 1 37 0 1851 153 19 7 chr17 18011346 18011653 -71492900 + MER7A DNA MER2_type 2 310 -36 2308 70 7 3 chr17 18011671 18011970 -71492583 - AluY SINE Alu -5 306 7 1507 80 0 15 chr17 18011980 18012180 -71492373 - AluSc SINE Alu -20 289 93 375 265 68 14 chr17 18012917 18013064 -71491489 - MER106B DNA MER1_type -1 1058 904 208 310 42 0 chr17 18014005 18014076 -71490477 + L2 LINE L2 2996 3069 -203 193 135 39 0 chr17 18014241 18014293 -71490260 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 225 218 39 13 chr17 18015266 18015344 -71489209 + A-rich Low_complexity Low_complexity 5 84 0 21 82 0 0 chr17 18016309 18016358 -71488195 + AT_rich Low_complexity Low_complexity 1 49 0 198 0 0 0 chr17 18016563 18016585 -71487968 + (TA)n Simple_repeat Simple_repeat 1 22 0 230 210 48 0 chr17 18019926 18019988 -71484565 - L1ME LINE L1 -237 5929 5865 2159 80 17 10 chr17 18020190 18020478 -71484075 + AluY SINE Alu 1 290 -21 423 184 80 16 chr17 18020496 18020621 -71483932 + L1 LINE L1 5191 5323 -823 210 375 0 0 chr17 18021534 18021630 -71482923 + CT-rich Low_complexity Low_complexity 4 99 0 1678 214 3 3 chr17 18022765 18023068 -71481485 + AluJo SINE Alu 2 304 -8 966 96 0 22 chr17 18023352 18023487 -71481066 - FLAM_C SINE Alu 0 133 2 809 295 76 28 chr17 18024781 18025279 -71479274 + MER90 LTR ERV1 70 591 -23 320 204 75 11 chr17 18025637 18025730 -71478823 + L1MD3 LINE L1 7897 7995 0 303 279 84 58 chr17 18026137 18026291 -71478262 - L1ME LINE L1 -5591 479 322 535 157 14 29 chr17 18026298 18026438 -71478115 + C-rich Low_complexity Low_complexity 5 142 0 1207 165 10 0 chr17 18026438 18026632 -71477921 - AluJo SINE Alu -45 267 72 3599 43 39 2 chr17 18027902 18028344 -71476209 + L1PA6 LINE L1 5693 6150 -4 256 320 16 25 chr17 18029349 18029471 -71475082 + G-rich Low_complexity Low_complexity 1 121 0 290 302 11 44 chr17 18029608 18029790 -71474763 + G-rich Low_complexity Low_complexity 2 177 0 209 270 0 59 chr17 18029848 18030000 -71474553 + GA-rich Low_complexity Low_complexity 3 145 0 21 36 0 0 chr17 18032111 18032139 -71472414 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 18032654 18032683 -71471870 + AT_rich Low_complexity Low_complexity 1 29 0 187 337 163 12 chr17 18033473 18033559 -71470994 + MIR SINE MIR 156 254 -8 240 235 0 0 chr17 18033721 18033772 -71470781 - MLT1E1 LTR MaLR 0 593 543 1112 217 37 51 chr17 18033832 18033922 -71470631 - MLT1E1 LTR MaLR -303 351 261 1767 141 79 7 chr17 18033922 18034213 -71470340 - AluJb SINE Alu 0 312 1 1112 217 37 51 chr17 18034213 18034477 -71470076 - MLT1E1 LTR MaLR -393 261 2 2803 136 7 15 chr17 18036779 18037236 -71467317 + L1PA16 LINE L1 5705 6157 -9 39040 73 9 1 chr17 18038777 18044323 -71460230 + L1P2 LINE L1 11 5595 -559 262 221 39 26 chr17 18044437 18044591 -71459962 + (TGGG)n Simple_repeat Simple_repeat 1 156 0 * 377 197 0 83 chr17 18044502 18044695 -71459858 + G-rich Low_complexity Low_complexity 2 178 0 5344 78 0 1 chr17 18044722 18045414 -71459139 + L1PA5 LINE L1 5462 6152 -2 794 208 72 5 chr17 18046442 18046649 -71457904 - L1M4 LINE L1 -5144 1398 1178 1621 156 8 4 chr17 18046651 18046908 -71457645 + AluSq SINE Alu 1 258 -55 1698 153 39 0 chr17 18047012 18047290 -71457263 + AluJo SINE Alu 21 308 0 1721 274 93 28 chr17 18047292 18048033 -71456520 - L1M4 LINE L1 -5731 811 23 494 276 136 5 chr17 18048043 18048264 -71456289 + Charlie2 DNA MER1_type 69 318 -2464 1357 218 57 35 chr17 18048283 18048773 -71455780 + Charlie2 DNA MER1_type 1866 2366 -496 266 307 24 24 chr17 18049838 18049965 -71454588 + MLT1J2 LTR MaLR 80 206 -244 462 276 50 50 chr17 18050392 18050478 -71454075 - MIR SINE MIR -21 241 156 1978 158 3 13 chr17 18050478 18050789 -71453764 - AluJo SINE Alu -4 308 1 462 276 50 50 chr17 18050789 18050923 -71453630 - MIR SINE MIR -105 157 21 743 175 8 0 chr17 18051283 18051403 -71453150 - FLAM_C SINE Alu -21 122 2 275 317 50 0 chr17 18051449 18051550 -71453003 - MIR SINE MIR -148 114 9 1490 150 4 77 chr17 18051867 18052141 -71452412 - AluJo SINE Alu -54 258 5 972 210 38 0 chr17 18052885 18052952 -71451601 - AluJo SINE Alu -117 195 132 180 0 0 0 chr17 18052952 18052972 -71451581 + (TTA)n Simple_repeat Simple_repeat 2 21 0 972 210 38 0 chr17 18052972 18053090 -71451463 - AluJo SINE Alu -180 132 3 406 290 101 34 chr17 18053109 18053347 -71451206 + MIR SINE MIR 2 255 -7 316 343 35 0 chr17 18053357 18053529 -71451024 + L1ME3A LINE L1 5988 6165 -5 579 281 65 84 chr17 18055928 18056451 -71448102 + MER34 LTR ERV1 1 513 -29 1514 224 45 65 chr17 18056927 18057604 -71446949 + LTR49-int LTR ERV1 368 1452 -4494 331 246 96 141 chr17 18058283 18058559 -71445994 + L1MEc LINE L1 1994 2281 -3934 1919 175 3 0 chr17 18058559 18058867 -71445686 + AluSx SINE Alu 1 309 -3 331 246 96 141 chr17 18058867 18059074 -71445479 + L1MEc LINE L1 2281 3341 -2874 1352 153 5 5 chr17 18059403 18059625 -71444928 + L1M2 LINE L1 5527 5748 -543 595 216 88 68 chr17 18059625 18059875 -71444678 - LTR48B LTR ERV1 0 644 390 351 278 51 17 chr17 18059927 18060129 -71444424 - LTR48 LTR ERV1 -375 279 9 813 180 6 35 chr17 18060154 18060326 -71444227 + L1MA9 LINE L1 5740 5906 -406 428 162 0 0 chr17 18060327 18060395 -71444158 + Tigger2 DNA MER2_type 2 69 -2649 * 2445 157 25 11 chr17 18060393 18060826 -71443727 + Tigger2 DNA MER2_type 2280 2718 0 1674 146 65 63 chr17 18060855 18060969 -71443584 + L1MA9 LINE L1 5921 6033 -279 2058 138 3 0 chr17 18060969 18061282 -71443271 + AluSx SINE Alu 1 314 0 1674 146 65 63 chr17 18061282 18061549 -71443004 + L1MA9 LINE L1 6033 6304 -8 554 299 68 21 chr17 18061730 18062068 -71442485 + L1MEd LINE L1 897 1250 -4869 1578 235 70 79 chr17 18062144 18062885 -71441668 + L1MC4 LINE L1 7267 8013 -29 2773 53 0 0 chr17 18062885 18063226 -71441327 - L1PA4 LINE L1 -3 6152 5812 1932 128 8 0 chr17 18063227 18063493 -71441060 - AluSx SINE Alu -44 268 1 1578 235 70 79 chr17 18063493 18063531 -71441022 + L1MC4 LINE L1 8012 8041 -1 1869 167 3 10 chr17 18063600 18063900 -71440653 - AluSx SINE Alu -14 298 1 2660 198 92 2 chr17 18064067 18064613 -71439940 + LTR49 LTR ERV1 1 595 0 2064 178 34 36 chr17 18064615 18065087 -71439466 + LTR49-int LTR ERV1 1 472 -5474 1811 145 40 14 chr17 18065087 18065384 -71439169 + AluSx SINE Alu 1 305 -7 2064 178 34 36 chr17 18065384 18065798 -71438755 + LTR49-int LTR ERV1 472 1472 -4474 2430 77 31 0 chr17 18065798 18066122 -71438431 + L1PA10 LINE L1 5835 6168 0 429 188 0 24 chr17 18066224 18066309 -71438244 + LTR49-int LTR ERV1 760 842 -5489 2723 164 18 64 chr17 18066345 18066720 -71437833 + LTR49-int LTR ERV1 841 1190 -5141 2120 126 0 7 chr17 18066720 18067014 -71437539 - AluSc SINE Alu -17 292 1 2723 164 18 64 chr17 18067014 18067232 -71437321 + LTR49-int LTR ERV1 1190 1416 -4915 1011 138 36 6 chr17 18067315 18067482 -71437071 + LTR49-int LTR ERV1 1372 1543 -4788 1852 138 4 4 chr17 18067499 18067775 -71436778 + AluJb SINE Alu 22 297 -15 1460 181 64 0 chr17 18067781 18067942 -71436611 - AluSx SINE Alu -13 299 113 225 0 0 0 chr17 18067942 18067967 -71436586 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1460 181 64 0 chr17 18067967 18068070 -71436483 - AluSx SINE Alu -199 113 18 1294 163 107 63 chr17 18068127 18068276 -71436277 + AluJo SINE Alu 1 169 -143 2375 84 7 0 chr17 18068276 18068572 -71435981 + AluSp SINE Alu 1 298 -15 1294 163 107 63 chr17 18068572 18068692 -71435861 + AluJo SINE Alu 169 282 -30 207 114 0 0 chr17 18068695 18068730 -71435823 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 432 194 41 10 chr17 18068730 18068828 -71435725 + LTR49-int LTR ERV1 3124 3224 -3107 6477 155 45 32 chr17 18068845 18070171 -71434382 + LTR49-int LTR ERV1 3703 5045 -1286 6663 125 16 10 chr17 18070271 18071300 -71433253 + LTR49-int LTR ERV1 5013 6047 -284 894 111 25 25 chr17 18071292 18071454 -71433099 + LTR49-int LTR ERV1 6169 6330 -1 * 575 85 0 12 chr17 18071537 18071619 -71432934 + LTR49 LTR ERV1 38 118 -477 1359 158 54 170 chr17 18071671 18072119 -71432434 - MSTD LTR MaLR 0 396 1 1368 233 119 2 chr17 18072224 18072670 -71431883 - MLT1D LTR MaLR -7 498 1 499 208 9 9 chr17 18074655 18074761 -71429792 + MER70B LTR ERVL 472 577 -1 1996 200 60 74 chr17 18075961 18076530 -71428023 + MER72 LTR ERV1 3 563 -159 1273 131 48 0 chr17 18076540 18076746 -71427807 - MER2 DNA MER2_type 0 345 130 1067 93 50 0 chr17 18076771 18076932 -71427621 - MER30 DNA MER1_type -61 169 1 529 183 11 0 chr17 18076932 18077023 -71427530 - MER2 DNA MER2_type -206 139 48 4328 189 24 15 chr17 18077116 18077900 -71426653 - MER21B LTR ERV1 -72 791 1 1696 171 10 24 chr17 18078054 18078372 -71426181 - AluJo SINE Alu 0 314 1 952 162 279 9 chr17 18078417 18078639 -71425914 + MER49 LTR ERV1 1 282 -641 1524 188 32 20 chr17 18078671 18079012 -71425541 + MER4D LTR ERV1 549 893 -10 1493 222 172 0 chr17 18079574 18080016 -71424537 - L1MB7 LINE L1 -7 6177 5660 300 83 0 0 chr17 18080582 18080630 -71423923 + (TG)n Simple_repeat Simple_repeat 2 49 0 1842 205 73 62 chr17 18081100 18081651 -71422902 - MER89 LTR ERV1 -2 557 1 227 247 0 27 chr17 18083770 18083843 -71420710 + (TTA)n Simple_repeat Simple_repeat 3 73 0 233 250 0 0 chr17 18084012 18084068 -71420485 - L1MB7 LINE L1 -574 5668 5613 2575 191 53 4 chr17 18084073 18084580 -71419973 - MER34 LTR ERV1 0 542 11 1067 241 59 46 chr17 18084611 18084873 -71419680 - L1MB7 LINE L1 -751 5395 5138 2358 199 18 64 chr17 18084873 18085470 -71419083 - MER101B LTR ERV1 0 570 1 1067 241 59 46 chr17 18085470 18085618 -71418935 - L1MB7 LINE L1 -1008 5138 5175 2161 128 0 0 chr17 18085618 18085915 -71418638 + AluSg SINE Alu 1 297 -13 1067 241 59 46 chr17 18085915 18086130 -71418423 - L1MB7 LINE L1 -970 5176 4965 4784 130 113 11 chr17 18086144 18086951 -71417602 - MER49 LTR ERV1 -21 902 14 325 258 156 16 chr17 18087006 18087192 -71417361 - L1MB7 LINE L1 -1212 4934 4723 3106 164 28 5 chr17 18087404 18087970 -71416583 - L1MA7 LINE L1 -1 6290 5712 29 98 0 0 chr17 18089459 18089551 -71415002 + AT_rich Low_complexity Low_complexity 1 92 0 281 220 30 23 chr17 18090102 18090234 -71414319 + (TA)n Simple_repeat Simple_repeat 1 133 0 228 111 0 0 chr17 18090306 18090342 -71414211 + (TAG)n Simple_repeat Simple_repeat 1 36 0 670 197 130 14 chr17 18090513 18090632 -71413921 + MER89 LTR ERV1 218 322 -237 1249 236 67 98 chr17 18090632 18091263 -71413290 + LTR9 LTR ERV1 2 612 0 670 197 130 14 chr17 18091263 18091366 -71413187 + MER89 LTR ERV1 322 466 -93 2387 147 11 69 chr17 18091378 18091638 -71412915 + L1MC1 LINE L1 5846 6067 -266 4508 138 19 38 chr17 18091638 18092432 -71412121 + MER4E LTR ERV1 1 779 0 2387 147 11 69 chr17 18092432 18092647 -71411906 + L1MC1 LINE L1 6067 6293 -40 881 241 30 31 chr17 18092659 18093149 -71411404 - MER34B LTR ERV1 -12 530 1 951 241 128 48 chr17 18093213 18093743 -71410810 + MER34C LTR ERV1 1 786 -1 1240 176 39 19 chr17 18093916 18093979 -71410574 + LTR54 LTR ERV1 1 61 -449 4459 157 15 18 chr17 18093979 18094764 -71409789 + LTR39 LTR ERV1 1 783 0 1240 176 39 19 chr17 18094764 18095141 -71409412 + LTR54 LTR ERV1 61 510 0 489 227 0 9 chr17 18095790 18095900 -71408653 - L1MC/D LINE L1 -586 5773 5665 291 229 43 0 chr17 18095988 18096058 -71408495 - MER77 LTR ERV1 -366 239 167 184 303 61 10 chr17 18096203 18096302 -71408251 - L3 LINE CR1 -106 1471 1368 1804 172 3 14 chr17 18096555 18096852 -71407701 - AluJb SINE Alu -13 299 6 1909 137 28 0 chr17 18096897 18097181 -71407372 + AluSx SINE Alu 1 292 -20 250 218 10 0 chr17 18097444 18097521 -71407032 + MER5A DNA MER1_type 4 81 -108 2155 131 0 0 chr17 18098087 18098378 -71406175 - AluSx SINE Alu -21 291 1 2503 81 0 0 chr17 18099177 18099486 -71405067 + AluY SINE Alu 1 309 -2 214 265 41 10 chr17 18100223 18100321 -71404232 + MER5A DNA MER1_type 9 109 -80 316 257 27 112 chr17 18100383 18100570 -71403983 - MER5A DNA MER1_type 0 189 19 547 113 12 0 chr17 18100681 18100761 -71403792 + AluJ/FLAM SINE Alu 11 91 -221 29 0 0 0 chr17 18101481 18101510 -71403043 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr17 18102067 18102095 -71402458 + AT_rich Low_complexity Low_complexity 1 28 0 327 85 0 0 chr17 18102193 18102240 -71402313 + (CA)n Simple_repeat Simple_repeat 1 47 0 1231 178 14 0 chr17 18102707 18102915 -71401638 - HERVL74 LTR ERVL -3657 2028 1818 863 150 0 0 chr17 18102915 18103048 -71401505 + AluJb SINE Alu 159 291 -21 201 132 0 0 chr17 18103076 18103114 -71401439 + (CA)n Simple_repeat Simple_repeat 1 38 0 213 247 124 22 chr17 18103481 18103570 -71400983 + MIR SINE MIR 149 246 -16 1633 173 11 0 chr17 18103701 18103979 -71400574 - AluJb SINE Alu -30 282 2 231 212 91 15 chr17 18104910 18104976 -71399577 - L1P LINE L1 -3329 2817 2747 463 239 58 85 chr17 18105323 18105653 -71398900 - L2 LINE L2 -539 2775 2455 252 270 27 47 chr17 18105691 18105893 -71398660 - L2 LINE L2 -1083 2231 1959 1099 208 5 0 chr17 18106343 18106540 -71398013 + AluJo SINE Alu 10 207 -105 269 213 37 0 chr17 18107787 18107895 -71396658 + (CGGGG)n Simple_repeat Simple_repeat 3 114 0 234 231 0 0 chr17 18109286 18109351 -71395202 - MIR SINE MIR -34 228 164 21 0 0 0 chr17 18109638 18109659 -71394894 + AT_rich Low_complexity Low_complexity 1 21 0 1976 67 0 8 chr17 18109843 18110081 -71394472 + AluY SINE Alu 69 304 -7 289 313 99 8 chr17 18110238 18110369 -71394184 + L1MEd LINE L1 554 696 -5509 306 274 26 8 chr17 18110578 18110695 -71393858 + L1M3de LINE L1 1784 1902 -4751 * 1532 225 69 14 chr17 18110694 18111130 -71393423 + L1MEd LINE L1 1640 2099 -4297 3612 84 2 8 chr17 18111134 18111634 -71392919 + L1PB1 LINE L1 5294 5790 -361 241 152 0 0 chr17 18111660 18111706 -71392847 + LTR66 LTR ERVL 394 439 -171 2636 91 14 6 chr17 18111731 18112095 -71392458 + L1PB1 LINE L1 5783 6149 -2 1499 293 84 11 chr17 18112103 18112710 -71391843 - L2 LINE L2 -1213 2101 1451 2411 97 0 0 chr17 18113370 18113668 -71390885 + AluY SINE Alu 1 298 -13 4183 232 42 24 chr17 18113692 18114281 -71390272 + L1MEd LINE L1 2111 2688 -3527 2111 128 3 3 chr17 18114281 18114597 -71389956 + AluSx SINE Alu 2 312 0 4183 232 42 24 chr17 18114597 18115470 -71389083 + L1MEd LINE L1 2688 3557 -2658 232 143 0 0 chr17 18115477 18115512 -71389041 - U2 snRNA snRNA -153 35 1 1472 164 0 29 chr17 18115541 18115779 -71388774 + AluSq SINE Alu 1 231 -82 6422 116 31 18 chr17 18115779 18116819 -71387734 + MER11C LTR ERVK 15 1067 -4 561 110 0 0 chr17 18116820 18116902 -71387651 + AluSg/x SINE Alu 213 294 -15 1951 136 6 29 chr17 18116903 18117219 -71387334 + AluSx SINE Alu 3 311 -1 3742 239 27 16 chr17 18117220 18118054 -71386499 + L1MEd LINE L1 3571 4423 -1792 492 165 18 0 chr17 18118054 18118163 -71386390 + L1MA8 LINE L1 6177 6287 -4 3742 239 27 16 chr17 18118163 18118422 -71386131 + L1MEd LINE L1 4423 4677 -1538 3445 150 39 18 chr17 18118680 18119352 -71385201 - L1MB3 LINE L1 -202 5981 5296 1019 246 123 3 chr17 18119466 18119646 -71384907 - L1ME3A LINE L1 -8 6162 5983 1139 257 86 29 chr17 18119646 18120444 -71384109 - L1MB1 LINE L1 -242 5947 5079 427 270 14 54 chr17 18121306 18121454 -71383099 + L1ME1 LINE L1 5946 6087 -79 1445 223 45 34 chr17 18122519 18122965 -71381588 - LTR43 LTR ERV1 0 634 120 2866 134 4 2 chr17 18123729 18124191 -71380362 - MER4C LTR ERV1 -2 463 1 3061 134 24 26 chr17 18124480 18125055 -71379498 - MER4B LTR ERV1 -36 574 1 3680 159 21 3 chr17 18125055 18126056 -71378497 - MER4B-int LTR ERV1 0 6758 5705 6473 133 25 3 chr17 18126060 18127054 -71377499 - L1P LINE L1 -1456 4690 3668 324 0 0 0 chr17 18127054 18127090 -71377463 + (TG)n Simple_repeat Simple_repeat 2 37 0 6473 133 25 3 chr17 18127090 18127182 -71377371 - L1P LINE L1 -2478 3668 3580 3728 120 11 5 chr17 18127171 18128181 -71376372 + L1PA8A LINE L1 4693 5709 -422 * 333 0 0 0 chr17 18128869 18128906 -71375647 + (CA)n Simple_repeat Simple_repeat 2 38 0 2925 269 48 36 chr17 18128996 18130531 -71374022 - SST1 Satellite centromeric -11 1552 1 336 24 0 0 chr17 18131231 18131272 -71373281 + (CA)n Simple_repeat Simple_repeat 2 42 0 2910 269 48 36 chr17 18131368 18132898 -71371655 - SST1 Satellite centromeric -15 1548 1 423 0 0 0 chr17 18133597 18133644 -71370909 + (CA)n Simple_repeat Simple_repeat 2 48 0 2909 269 48 36 chr17 18133740 18135270 -71369283 - SST1 Satellite centromeric -15 1548 1 477 0 0 0 chr17 18135970 18136023 -71368530 + (CA)n Simple_repeat Simple_repeat 2 54 0 2906 270 50 35 chr17 18136119 18137645 -71366908 - SST1 Satellite centromeric -15 1548 1 444 19 0 0 chr17 18138345 18138398 -71366155 + (CA)n Simple_repeat Simple_repeat 2 54 0 2351 262 56 42 chr17 18138494 18139806 -71364747 - SST1 Satellite centromeric -15 1548 219 2694 168 63 26 chr17 18140082 18140525 -71364028 + MER4B-int LTR ERV1 5099 5571 -1187 1270 179 124 43 chr17 18140525 18140872 -71363681 - THE1C LTR MaLR 0 375 1 2694 168 63 26 chr17 18140872 18141031 -71363522 + MER4B-int LTR ERV1 5571 5723 -1035 5749 97 4 0 chr17 18141033 18141855 -71362698 - L1PA8A LINE L1 -2 6129 5305 1680 135 17 7 chr17 18141955 18142244 -71362309 + L1PA8A LINE L1 5838 6129 -2 3310 152 55 31 chr17 18142246 18142405 -71362148 - MER4B-int LTR ERV1 -1035 5723 5569 1270 179 124 43 chr17 18142405 18142752 -71361801 + THE1C LTR MaLR 1 375 0 3310 152 55 31 chr17 18142752 18143295 -71361258 - MER4B-int LTR ERV1 -1189 5569 5004 834 178 25 0 chr17 18143285 18143442 -71361111 - MER4B-int LTR ERV1 -2277 4481 4321 * 855 214 44 15 chr17 18143446 18143652 -71360901 - MER4B-int LTR ERV1 -2572 4186 3975 1119 282 28 23 chr17 18143666 18144056 -71360497 - SST1 Satellite centromeric -1171 392 1 191 125 25 0 chr17 18144787 18144827 -71359726 + GA-rich Low_complexity Low_complexity 2 42 0 237 98 0 0 chr17 18144834 18144875 -71359678 + (CA)n Simple_repeat Simple_repeat 2 42 0 1852 273 89 38 chr17 18144908 18146001 -71358552 - SST1 Satellite centromeric -21 1542 395 438 259 56 35 chr17 18146024 18146221 -71358332 - SST1 Satellite centromeric -1362 201 1 243 103 0 0 chr17 18146918 18146957 -71357596 + (CA)n Simple_repeat Simple_repeat 2 40 0 2585 286 55 40 chr17 18147047 18148576 -71355977 - SST1 Satellite centromeric -11 1552 1 459 0 0 0 chr17 18149276 18149327 -71355226 + (CA)n Simple_repeat Simple_repeat 2 52 0 2846 270 51 36 chr17 18149423 18150948 -71353605 - SST1 Satellite centromeric -15 1548 1 477 0 0 0 chr17 18151648 18151701 -71352852 + (CA)n Simple_repeat Simple_repeat 2 54 0 2863 269 48 36 chr17 18151797 18153326 -71351227 - SST1 Satellite centromeric -15 1548 1 731 306 92 33 chr17 18153729 18154396 -71350157 - SST1 Satellite centromeric -11 1552 847 951 259 4 16 chr17 18154397 18154644 -71349909 - AluJo SINE Alu -54 258 15 1049 210 55 107 chr17 18155899 18156284 -71348269 - MLT1A1 LTR MaLR 0 365 1 758 261 78 52 chr17 18156643 18156965 -71347588 - L1P4 LINE L1 -364 5804 5492 2398 92 5 43 chr17 18156965 18157334 -71347219 + THE1A LTR MaLR 1 355 0 10779 117 2 1 chr17 18157334 18158913 -71345640 + THE1A-int LTR MaLR 1 1580 0 2038 156 23 0 chr17 18158913 18159260 -71345293 + THE1A LTR MaLR 1 355 0 758 261 78 52 chr17 18159260 18159571 -71344982 - L1P4 LINE L1 -676 5492 5190 1683 146 107 7 chr17 18159571 18159852 -71344701 - AluSx SINE Alu -1 311 3 758 261 78 52 chr17 18159852 18160343 -71344210 - L1P4 LINE L1 -978 5190 4647 27 0 0 0 chr17 18160354 18160381 -71344172 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr17 18160381 18160403 -71344150 + (GA)n Simple_repeat Simple_repeat 2 23 0 1465 189 0 42 chr17 18160403 18160688 -71343865 - AluJo SINE Alu -39 273 1 21 36 0 0 chr17 18161449 18161477 -71343076 + AT_rich Low_complexity Low_complexity 1 28 0 2156 121 0 0 chr17 18161654 18161961 -71342592 - AluSq SINE Alu 0 307 1 321 284 37 9 chr17 18162005 18162114 -71342439 - HAL1b LINE L1 -1 1347 1236 1889 162 3 3 chr17 18162188 18162485 -71342068 - AluSx SINE Alu -13 299 3 734 197 0 0 chr17 18162710 18162842 -71341711 - FLAM_C SINE Alu -1 132 1 1651 177 7 17 chr17 18163301 18163601 -71340952 + AluJb SINE Alu 1 297 -15 4263 141 46 4 chr17 18163603 18164283 -71340270 + Tigger1 DNA MER2_type 1066 1773 -645 2072 120 41 0 chr17 18164283 18164574 -71339979 - AluSp SINE Alu -10 303 1 770 258 36 10 chr17 18164631 18164825 -71339728 + MER115 DNA AcHobo 445 643 -50 305 99 50 20 chr17 18165006 18165107 -71339446 + (TTATA)n Simple_repeat Simple_repeat 2 105 0 3739 131 14 44 chr17 18165128 18165630 -71338923 + Tigger1 DNA MER2_type 1802 2283 -135 1940 126 40 0 chr17 18165630 18165908 -71338645 - AluSx SINE Alu -22 290 2 3739 131 14 44 chr17 18165908 18166041 -71338512 + Tigger1 DNA MER2_type 2283 2418 0 468 314 103 35 chr17 18166044 18166414 -71338139 - LTR16C LTR ERVL -17 474 80 1126 274 112 26 chr17 18166521 18167069 -71337484 + MER115 DNA AcHobo 10 643 -50 1715 120 14 18 chr17 18167470 18167754 -71336799 - L1MA4 LINE L1 0 6300 6018 378 246 112 93 chr17 18168041 18168256 -71336297 - MIR SINE MIR 0 262 44 1898 139 0 14 chr17 18168360 18168675 -71335878 + AluSx SINE Alu 7 317 0 288 307 50 0 chr17 18168769 18168870 -71335683 - L2 LINE L2 -15 3298 3193 312 378 32 0 chr17 18169477 18169633 -71334920 - MIR SINE MIR -74 188 28 24 32 0 0 chr17 18169778 18169809 -71334744 + AT_rich Low_complexity Low_complexity 1 31 0 282 306 32 19 chr17 18170039 18170196 -71334357 + L1M4 LINE L1 3707 3865 -2281 602 89 0 11 chr17 18170292 18170382 -71334171 - L1PA16 LINE L1 -9 6157 6069 630 232 0 43 chr17 18170620 18170758 -71333795 + FLAM_A SINE Alu 1 132 -1 1521 200 31 9 chr17 18170759 18171098 -71333455 - MER93a LTR ERV1 -7 395 4 21 0 0 0 chr17 18171541 18171562 -71332991 + AT_rich Low_complexity Low_complexity 1 21 0 4632 174 44 24 chr17 18171574 18172063 -71332490 + L1MB3 LINE L1 5099 5577 -606 1992 132 0 4 chr17 18172063 18172387 -71332166 + AluSg SINE Alu 1 323 0 4632 174 44 24 chr17 18172387 18172963 -71331590 + L1MB3 LINE L1 5577 6180 -3 28 79 0 0 chr17 18172971 18173034 -71331519 + AT_rich Low_complexity Low_complexity 1 63 0 27 0 0 0 chr17 18173515 18173542 -71331011 + AT_rich Low_complexity Low_complexity 1 27 0 2227 100 7 3 chr17 18173544 18173843 -71330710 - AluSg SINE Alu -10 300 1 2080 141 0 0 chr17 18174407 18174704 -71329849 + AluSq SINE Alu 1 297 -16 2024 123 4 0 chr17 18174720 18174997 -71329556 + AluSp SINE Alu 4 281 -32 240 43 43 21 chr17 18174998 18175045 -71329508 + (TAAAA)n Simple_repeat Simple_repeat 2 49 0 1458 162 4 0 chr17 18175079 18175326 -71329227 - L1M2 LINE L1 -498 5793 5546 1055 157 0 0 chr17 18175496 18175678 -71328875 - AluSg/x SINE Alu 0 314 133 1871 159 0 7 chr17 18175803 18176093 -71328460 + AluJb SINE Alu 1 288 -24 2122 120 3 23 chr17 18176933 18177241 -71327312 + AluSq SINE Alu 5 306 -7 505 304 60 16 chr17 18177372 18177719 -71326834 + L1ME3A LINE L1 5421 5784 -389 46 33 0 0 chr17 18177721 18177781 -71326772 + AT_rich Low_complexity Low_complexity 1 60 0 1895 151 0 0 chr17 18177781 18178066 -71326487 - AluSx SINE Alu -25 287 3 1901 127 16 52 chr17 18178068 18178229 -71326324 - AluSx SINE Alu -16 296 150 1871 133 7 7 chr17 18178229 18178507 -71326046 - AluSc SINE Alu -20 289 12 1901 127 16 52 chr17 18178507 18178652 -71325901 - AluSx SINE Alu -162 150 1 254 237 54 21 chr17 18178692 18178785 -71325768 + L1ME3A LINE L1 5852 5947 -223 1578 130 4 29 chr17 18178831 18179077 -71325476 + AluSg/x SINE Alu 65 304 -8 1479 93 6 0 chr17 18179426 18179608 -71324945 + AluSq SINE Alu 1 183 -130 232 206 162 0 chr17 18179609 18179677 -71324876 + AluSq SINE Alu 223 301 -2 788 182 6 3 chr17 18179946 18180110 -71324443 + L1MA9 LINE L1 5803 5969 -331 2166 135 0 3 chr17 18180110 18180421 -71324132 + AluSg SINE Alu 1 310 0 228 338 76 14 chr17 18181067 18181212 -71323341 + MIR SINE MIR 21 174 -88 4895 174 39 10 chr17 18181723 18182659 -71321894 + L1MC2 LINE L1 5361 6323 -21 2019 134 0 0 chr17 18182664 18182977 -71321576 - AluY SINE Alu 0 313 1 978 185 0 0 chr17 18182980 18183137 -71321416 - AluJb SINE Alu -19 293 137 1303 208 44 6 chr17 18183142 18183452 -71321101 + L1MC/D LINE L1 5370 5626 -718 33 25 0 0 chr17 18183452 18183492 -71321061 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr17 18183671 18183694 -71320859 + AT_rich Low_complexity Low_complexity 1 23 0 1125 140 5 50 chr17 18183964 18184164 -71320389 + AluSx SINE Alu 1 191 -121 542 187 24 24 chr17 18184245 18184368 -71320185 - L2 LINE L2 -4 3309 3187 1080 115 0 0 chr17 18184406 18184545 -71320008 + AluSq/x SINE Alu 3 141 -171 2106 107 3 27 chr17 18184545 18184844 -71319709 + AluSx SINE Alu 1 292 -20 843 127 14 28 chr17 18184985 18185127 -71319426 - AluSp/q SINE Alu -2 311 172 2179 136 0 0 chr17 18185165 18185473 -71319080 + AluSg SINE Alu 1 308 -2 529 28 0 0 chr17 18185855 18185927 -71318626 + AluY SINE Alu 240 311 0 2339 221 115 6 chr17 18185955 18186475 -71318078 - MER77 LTR ERV1 -28 577 1 1787 183 3 3 chr17 18186581 18186882 -71317671 - AluJb SINE Alu -11 301 1 482 119 0 0 chr17 18186916 18186983 -71317570 + AluJ/FLAM SINE Alu 2 68 -244 1944 147 7 0 chr17 18186983 18187282 -71317271 + AluSx SINE Alu 1 301 -11 260 243 14 0 chr17 18187283 18187353 -71317200 + (TA)n Simple_repeat Simple_repeat 1 71 0 1544 175 53 23 chr17 18187653 18187956 -71316597 - MER44D DNA MER2_type -1 604 421 359 0 43 0 chr17 18187957 18188003 -71316550 + (TTTC)n Simple_repeat Simple_repeat 2 49 0 6267 16 0 0 chr17 18188004 18188702 -71315851 - L1PA2 LINE L1 0 6155 5458 2657 33 0 3 chr17 18188702 18189033 -71315520 + L1P1 LINE L1 4980 5309 -837 1070 16 0 0 chr17 18189186 18189310 -71315243 + L1P1 LINE L1 5404 5527 -628 894 46 39 0 chr17 18189310 18189440 -71315113 + (TTTC)n Simple_repeat Simple_repeat 4 138 0 1849 171 3 0 chr17 18189462 18189749 -71314804 - AluSx SINE Alu -24 288 1 266 276 57 8 chr17 18189804 18189927 -71314626 + HAL1b LINE L1 1215 1343 -5 1863 151 11 0 chr17 18190070 18190341 -71314212 + AluSx SINE Alu 11 284 -28 1982 126 7 0 chr17 18190430 18190708 -71313845 + AluSx SINE Alu 1 280 -32 198 0 0 0 chr17 18190709 18190731 -71313822 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 285 29 0 0 chr17 18192304 18192338 -71312215 + (TG)n Simple_repeat Simple_repeat 1 34 0 1555 198 3 7 chr17 18192677 18192965 -71311588 - AluJb SINE Alu -21 291 5 583 155 0 3 chr17 18193095 18193333 -71311220 + AluSx SINE Alu 1 312 0 1528 174 47 19 chr17 18193427 18193749 -71310804 - L1MB8 LINE L1 0 6178 5848 839 260 48 70 chr17 18194184 18194666 -71309887 - PABL_B LTR ERV1 -42 625 1 2057 145 3 0 chr17 18194915 18195225 -71309328 - AluSq SINE Alu -2 311 1 2146 110 3 0 chr17 18195227 18195517 -71309036 - AluSx SINE Alu -21 291 1 1101 144 0 6 chr17 18195525 18195699 -71308854 - AluSq SINE Alu -10 303 131 23 0 0 0 chr17 18195701 18195724 -71308829 + AT_rich Low_complexity Low_complexity 1 23 0 587 98 0 0 chr17 18195974 18196056 -71308497 + AluY SINE Alu 217 298 -13 21 0 0 0 chr17 18196149 18196170 -71308383 + AT_rich Low_complexity Low_complexity 1 21 0 2073 122 3 13 chr17 18196342 18196645 -71307908 + AluSx SINE Alu 1 300 -12 2174 142 7 0 chr17 18196937 18197247 -71307306 + AluSx SINE Alu 1 312 0 1864 169 3 22 chr17 18198073 18198386 -71306167 - AluJb SINE Alu -5 307 1 2190 109 3 14 chr17 18198454 18198768 -71305785 + AluSp SINE Alu 1 311 0 2023 157 0 25 chr17 18198843 18199162 -71305391 + AluJo SINE Alu 1 311 -1 2217 119 0 0 chr17 18199162 18199457 -71305096 + AluSc SINE Alu 1 295 -14 1581 154 30 4 chr17 18199457 18199724 -71304829 - MER54A LTR ERVL -627 274 1 1468 153 141 0 chr17 18199901 18200163 -71304390 - AluSx SINE Alu -3 299 1 2288 114 3 0 chr17 18200762 18201060 -71303493 - AluSp SINE Alu -14 299 1 330 243 0 0 chr17 18201196 18201266 -71303287 + AluS SINE Alu 226 295 -6 1021 156 0 54 chr17 18201268 18201283 -71303270 + AluSg/x SINE Alu 118 132 -178 2322 104 3 0 chr17 18201283 18201592 -71302961 + AluSq SINE Alu 2 311 -2 1021 156 0 54 chr17 18201592 18201762 -71302791 + AluSg/x SINE Alu 132 293 -17 705 188 0 0 chr17 18201971 18202088 -71302465 + FLAM_C SINE Alu 1 117 -16 267 54 0 0 chr17 18202091 18202128 -71302425 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 443 147 0 0 chr17 18202154 18202222 -71302331 + AluJ/FRAM SINE Alu 225 292 -20 288 102 0 0 chr17 18202471 18202520 -71302033 + (T)n Simple_repeat Simple_repeat 1 49 0 504 16 0 0 chr17 18202521 18202584 -71301969 - L1PA2 LINE L1 -1 6154 6092 1240 217 4 0 chr17 18202786 18203030 -71301523 + AluJb SINE Alu 1 245 -67 1795 124 0 8 chr17 18203030 18203279 -71301274 + AluSx SINE Alu 34 280 -32 777 76 0 0 chr17 18203279 18203384 -71301169 + (GAAA)n Simple_repeat Simple_repeat 3 107 0 1245 222 20 20 chr17 18203393 18203699 -71300854 + AluJo SINE Alu 6 311 -1 3856 169 72 37 chr17 18203753 18204484 -71300069 - MER21B LTR ERV1 0 863 98 2163 108 16 32 chr17 18204484 18204799 -71299754 + AluSx SINE Alu 3 312 0 3856 169 72 37 chr17 18204799 18204901 -71299652 - MER21B LTR ERV1 -765 98 1 1467 172 22 52 chr17 18205202 18205670 -71298883 - LTR25 LTR ERV1 -47 747 362 803 141 263 29 chr17 18205670 18205982 -71298571 + LTR46 LTR ERV1 1 460 0 627 198 26 0 chr17 18205982 18206086 -71298467 - LTR25 LTR ERV1 -438 356 250 459 136 30 121 chr17 18206080 18206212 -71298341 - MER61E LTR ERV1 -417 152 33 * 1390 113 0 0 chr17 18206850 18207035 -71297518 + AluSg/x SINE Alu 114 298 -14 394 269 132 53 chr17 18207036 18207393 -71297160 - L2 LINE L2 -82 3231 2847 274 158 0 0 chr17 18207445 18207483 -71297070 - Alu SINE Alu -262 38 1 2447 93 3 0 chr17 18207848 18208158 -71296395 - AluSx SINE Alu -1 311 1 1693 168 14 0 chr17 18208207 18208499 -71296054 - AluSx SINE Alu -16 296 1 1973 135 10 13 chr17 18208709 18209021 -71295532 + AluSx SINE Alu 1 311 -1 1089 179 168 19 chr17 18209050 18209318 -71295235 - MER106B DNA MER1_type -535 524 217 1929 145 7 7 chr17 18209322 18209618 -71294935 - AluSx SINE Alu -16 296 1 544 153 0 0 chr17 18209629 18209714 -71294839 - AluJ/FLAM SINE Alu -226 86 2 699 232 9 73 chr17 18209714 18209934 -71294619 + L1MC4a LINE L1 6687 6892 -916 2013 116 9 44 chr17 18209936 18210254 -71294299 - AluSq SINE Alu -6 307 1 1329 113 4 74 chr17 18210604 18210833 -71293720 - AluSp SINE Alu -3 310 98 1915 147 0 7 chr17 18210833 18211118 -71293435 - AluSg SINE Alu -16 294 12 2023 136 0 7 chr17 18211137 18211424 -71293129 - AluSg SINE Alu -24 286 2 258 224 0 40 chr17 18211477 18211553 -71293000 - MER89 LTR ERV1 0 559 487 2232 225 9 18 chr17 18211568 18211694 -71292859 - L1P LINE L1 -858 5288 5162 1749 128 11 8 chr17 18211694 18211959 -71292594 - AluSg SINE Alu -3 307 42 2232 225 9 18 chr17 18211959 18212396 -71292157 - L1P LINE L1 -984 5162 4730 2345 158 19 9 chr17 18212405 18212824 -71291729 + L1PA16 LINE L1 5744 6166 0 2109 129 3 0 chr17 18212896 18213205 -71291348 + AluSg SINE Alu 1 310 0 2112 104 0 3 chr17 18213339 18213637 -71290916 + AluY SINE Alu 1 297 -14 2634 200 105 4 chr17 18213900 18214424 -71290129 - MER77 LTR ERV1 -28 577 1 232 277 24 0 chr17 18214426 18214509 -71290044 + L1ME LINE L1 5492 5576 -545 1499 201 7 0 chr17 18214549 18214838 -71289715 - AluJb SINE Alu -21 291 1 221 229 57 19 chr17 18214838 18214871 -71289682 + (TATATG)n Simple_repeat Simple_repeat 6 36 -78 1734 168 7 0 chr17 18214871 18215169 -71289384 + AluSq SINE Alu 1 300 -13 221 229 57 19 chr17 18215169 18215240 -71289313 + (TATATG)n Simple_repeat Simple_repeat 36 114 0 1539 201 17 3 chr17 18215534 18215833 -71288720 - MER44D DNA MER2_type -1 604 430 1604 200 0 0 chr17 18215836 18216230 -71288323 - AluSx SINE Alu 0 394 1 296 274 48 8 chr17 18216283 18216407 -71288146 + HAL1b LINE L1 1215 1343 -5 1995 143 0 0 chr17 18216535 18216835 -71287718 + AluSx SINE Alu 1 300 -12 1904 127 7 7 chr17 18216964 18217256 -71287297 + AluSx SINE Alu 2 293 -19 285 29 0 0 chr17 18218859 18218893 -71285660 + (TG)n Simple_repeat Simple_repeat 1 34 0 21 36 0 0 chr17 18219209 18219237 -71285316 + AT_rich Low_complexity Low_complexity 1 28 0 1265 187 4 30 chr17 18219237 18219499 -71285054 - AluJb SINE Alu -57 255 1 469 138 4 17 chr17 18219626 18219880 -71284673 + AluSx SINE Alu 1 312 0 1344 181 72 10 chr17 18219939 18220243 -71284310 - L1MB8 LINE L1 0 6178 5856 1556 129 6 129 chr17 18220343 18220669 -71283884 - AluSx SINE Alu -16 286 1 798 141 15 30 chr17 18220671 18220806 -71283747 - AluJo/FLAM SINE Alu -169 133 1 325 250 0 34 chr17 18220806 18220894 -71283659 - MER33 DNA MER1_type -201 123 39 1804 153 11 0 chr17 18221237 18221519 -71283034 - AluSx SINE Alu -17 295 11 2004 106 11 3 chr17 18221638 18222012 -71282541 - AluSq SINE Alu 0 376 1 868 150 7 0 chr17 18222015 18222155 -71282398 - AluYa5 SINE Alu -170 141 1 220 133 22 22 chr17 18223137 18223182 -71281371 + GA-rich Low_complexity Low_complexity 2 46 0 1225 180 131 14 chr17 18223226 18223509 -71281044 - SST1 Satellite centromeric -10 1553 1238 844 158 0 13 chr17 18223515 18223667 -71280886 + AluSg/x SINE Alu 157 306 -6 7611 140 34 27 chr17 18223740 18225136 -71279417 - SST1 Satellite centromeric -157 1406 1 1454 312 48 39 chr17 18225687 18226514 -71278039 - SST1 Satellite centromeric -312 1251 417 492 320 59 0 chr17 18226529 18226748 -71277805 - SST1 Satellite centromeric -1331 232 1 203 265 0 24 chr17 18227451 18227534 -71277019 + (CAGAGA)n Simple_repeat Simple_repeat 2 82 0 * 249 210 16 0 chr17 18227486 18227548 -71277005 + GA-rich Low_complexity Low_complexity 1 63 0 261 0 0 0 chr17 18227548 18227577 -71276976 + (CA)n Simple_repeat Simple_repeat 2 30 0 2526 259 56 42 chr17 18227581 18228954 -71275599 - SST1 Satellite centromeric -1315 1392 1 201 154 0 0 chr17 18229646 18229685 -71274868 + (CA)n Simple_repeat Simple_repeat 2 40 0 219 170 21 0 chr17 18229689 18229736 -71274817 + GA-rich Low_complexity Low_complexity 1 48 0 294 29 0 0 chr17 18229741 18229776 -71274777 + (CA)n Simple_repeat Simple_repeat 2 36 0 1011 243 62 55 chr17 18229813 18230376 -71274177 - SST1 Satellite centromeric -21 1542 976 291 319 97 21 chr17 18230972 18231116 -71273437 + MIR SINE MIR 58 212 -50 369 0 0 0 chr17 18232353 18232394 -71272159 + (TC)n Simple_repeat Simple_repeat 2 42 0 21 57 0 0 chr17 18232658 18232693 -71271860 + AT_rich Low_complexity Low_complexity 1 35 0 671 296 63 35 chr17 18232968 18233286 -71271267 + L1M4 LINE L1 2841 3167 -2979 470 127 13 0 chr17 18233536 18233615 -71270938 - MADE1 DNA Mariner 0 80 1 220 309 82 36 chr17 18233737 18233847 -71270706 - L2 LINE L2 -959 2355 2241 267 324 52 29 chr17 18234816 18234952 -71269601 - L2 LINE L2 0 3272 3134 21 36 0 0 chr17 18235949 18235977 -71268576 + AT_rich Low_complexity Low_complexity 1 28 0 211 269 103 0 chr17 18236202 18236280 -71268273 - L2 LINE L2 -5 3308 3223 21 36 0 0 chr17 18237489 18237517 -71267036 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr17 18237753 18237778 -71266775 + AT_rich Low_complexity Low_complexity 1 25 0 21 82 0 0 chr17 18237963 18238012 -71266541 + AT_rich Low_complexity Low_complexity 1 49 0 1746 143 57 0 chr17 18238326 18238605 -71265948 - AluSq SINE Alu -18 295 1 2173 88 7 3 chr17 18238828 18239135 -71265418 - AluY SINE Alu -3 308 1 2045 133 0 0 chr17 18239302 18239596 -71264957 + AluSx SINE Alu 1 294 -18 3280 164 43 31 chr17 18240122 18240500 -71264053 - L1MA5 LINE L1 -2 6298 5907 2276 77 0 10 chr17 18240500 18240812 -71263741 - AluY SINE Alu -2 309 1 3280 164 43 31 chr17 18240812 18241081 -71263472 - L1MA5 LINE L1 -393 5907 5643 2822 221 30 1 chr17 18241084 18241778 -71262775 + L1MA8 LINE L1 3884 4597 -1549 1703 169 18 32 chr17 18241922 18242260 -71262293 - MER52A LTR ERV1 -1373 382 50 243 240 72 48 chr17 18242496 18242621 -71261932 - MER52A LTR ERV1 -1627 128 1 29 0 0 0 chr17 18243210 18243239 -71261314 + AT_rich Low_complexity Low_complexity 1 29 0 1686 203 0 0 chr17 18243626 18243937 -71260616 + AluSx SINE Alu 1 311 -1 434 238 40 7 chr17 18244792 18244943 -71259610 - L1MA8 LINE L1 -4 6287 6132 * 4252 158 44 45 chr17 18244926 18245225 -71259328 + L1MA8 LINE L1 5254 5552 -739 483 127 13 0 chr17 18245225 18245304 -71259249 + MADE1 DNA Mariner 1 80 0 4252 158 44 45 chr17 18245304 18245935 -71258618 + L1MA8 LINE L1 5552 6183 -108 30 72 0 12 chr17 18246331 18246366 -71258187 + AT_rich Low_complexity Low_complexity 1 35 -47 1798 138 4 0 chr17 18246366 18246642 -71257911 - AluSq SINE Alu -35 278 2 30 72 0 12 chr17 18246642 18246689 -71257864 + AT_rich Low_complexity Low_complexity 35 82 0 191 344 33 27 chr17 18247555 18247692 -71256861 - MIR SINE MIR -42 166 28 524 176 92 11 chr17 18247901 18248082 -71256471 + L1MA8 LINE L1 6104 6291 0 2133 69 24 3 chr17 18248967 18249256 -71255297 - AluY SINE Alu -16 295 1 323 345 115 20 chr17 18251540 18251792 -71252761 - L2 LINE L2 -39 3274 2999 496 275 7 27 chr17 18251830 18251979 -71252574 - L2 LINE L2 -939 2375 2230 581 311 32 32 chr17 18251979 18252230 -71252323 - L2 LINE L2 -2114 1200 950 1742 176 10 0 chr17 18252486 18252782 -71251771 + AluJo SINE Alu 1 299 -13 352 187 8 41 chr17 18252794 18252917 -71251636 + GA-rich Low_complexity Low_complexity 1 119 0 213 231 0 15 chr17 18252923 18252988 -71251565 + A-rich Low_complexity Low_complexity 4 67 0 889 184 0 80 chr17 18253327 18253539 -71251014 + AluJb SINE Alu 90 284 -28 508 296 100 37 chr17 18253553 18253932 -71250621 + L1 LINE L1 2204 2606 -3540 329 309 57 0 chr17 18254045 18254168 -71250385 + L1 LINE L1 2644 2773 -3373 191 86 0 29 chr17 18254454 18254489 -71250064 + (CATAT)n Simple_repeat Simple_repeat 3 36 0 183 376 172 0 chr17 18254511 18254604 -71249949 + L2 LINE L2 3125 3233 -39 258 256 35 23 chr17 18255984 18256070 -71248483 + MIR SINE MIR 41 127 -81 276 290 129 11 chr17 18256154 18256247 -71248306 + L2 LINE L2 3147 3250 -22 200 278 48 24 chr17 18257594 18257696 -71246857 - MIR SINE MIR -77 131 56 189 324 235 12 chr17 18258412 18258582 -71245971 - MIR SINE MIR -34 228 21 184 122 146 24 chr17 18258664 18258705 -71245848 + L2 LINE L2 3221 3266 -6 216 167 0 0 chr17 18259566 18259614 -71244939 + (CA)n Simple_repeat Simple_repeat 1 48 0 238 258 25 58 chr17 18260190 18260310 -71244243 - SST1 Satellite centromeric -606 957 842 243 314 58 45 chr17 18260509 18261048 -71243505 - SST1 Satellite centromeric -952 611 66 261 0 0 0 chr17 18261813 18261842 -71242711 + (T)n Simple_repeat Simple_repeat 1 29 0 207 184 0 0 chr17 18262037 18262075 -71242478 + (CA)n Simple_repeat Simple_repeat 2 39 0 397 289 56 56 chr17 18262986 18263557 -71240996 - SST1 Satellite centromeric -962 601 31 397 152 0 0 chr17 18263572 18263651 -71240902 + ALR/Alpha Satellite centromeric 9 87 -85 897 200 8 2 chr17 18263737 18265873 -71238680 + ALR/Alpha Satellite centromeric 1 2149 -1 891 211 14 5 chr17 18265888 18266740 -71237813 + ALR/Alpha Satellite centromeric 1 860 -8 969 200 10 3 chr17 18266754 18276417 -71228136 + ALR/Alpha Satellite centromeric 1 9727 0 994 196 8 4 chr17 18276432 18277537 -71227016 + ALR/Alpha Satellite centromeric 1 1101 -11460 2182 112 0 10 chr17 18277537 18277872 -71226681 + AluY SINE Alu 1 332 0 994 196 8 4 chr17 18277872 18282455 -71222098 + ALR/Alpha Satellite centromeric 1101 5667 -6894 1896 149 7 17 chr17 18282455 18282751 -71221802 + AluSx SINE Alu 1 293 -19 994 196 8 4 chr17 18282751 18288900 -71215653 + ALR/Alpha Satellite centromeric 5667 12511 -50 3943 107 47 2 chr17 18288918 18289497 -71215056 - LTR14B LTR ERVK 0 608 4 873 213 0 0 chr17 18289504 18289903 -71214650 + ALR/Alpha Satellite centromeric 1 399 -1 1025 193 5 5 chr17 18289920 18294372 -71210181 + ALR/Alpha Satellite centromeric 1 4451 -29 2056 106 3 14 chr17 18294376 18294658 -71209895 + AluY SINE Alu 6 284 -27 931 192 4 2 chr17 18294799 18297768 -71206785 + ALR/Alpha Satellite centromeric 1 2976 -9 763 152 30 23 chr17 18297869 18298001 -71206552 - FLAM_C SINE Alu 0 133 1 506 86 0 0 chr17 18298006 18298076 -71206477 - Alu SINE Alu -12 300 231 547 284 21 103 chr17 18298155 18298479 -71206074 - L1MEd LINE L1 -4902 1217 868 2218 75 0 14 chr17 18298479 18298759 -71205794 - AluY SINE Alu 0 311 36 2836 202 78 100 chr17 18298759 18299749 -71204804 - LTR5 LTR ERVK 0 969 1 2214 111 7 0 chr17 18299802 18300099 -71204454 - AluSp SINE Alu -13 300 2 2427 93 0 0 chr17 18300112 18300422 -71204131 - AluSx SINE Alu -2 310 1 3095 125 4 47 chr17 18301671 18301945 -71202608 - MER4B LTR ERV1 -30 749 465 2044 124 3 0 chr17 18301945 18302243 -71202310 + AluSx SINE Alu 6 304 -8 3095 125 4 47 chr17 18302243 18302575 -71201978 - MER4B LTR ERV1 -314 465 1 247 167 17 17 chr17 18302922 18302982 -71201571 - FLAM SINE Alu 0 133 74 1938 138 0 0 chr17 18303703 18304016 -71200537 - AluSx SINE Alu 0 313 1 863 269 29 66 chr17 18304019 18304154 -71200399 - L1MC/D LINE L1 -2079 5729 5590 1879 110 28 48 chr17 18304154 18304468 -71200085 - AluSx SINE Alu 0 308 1 863 269 29 66 chr17 18304468 18304708 -71199845 - L1MC/D LINE L1 -2218 5590 5370 2295 70 0 27 chr17 18304708 18305009 -71199544 + AluY SINE Alu 1 293 -18 863 269 29 66 chr17 18305009 18305085 -71199468 - L1MC/D LINE L1 -2438 5370 5293 1580 210 17 3 chr17 18305135 18305435 -71199118 + AluJo SINE Alu 5 308 -4 1188 123 0 6 chr17 18305447 18305609 -71198944 + AluSx SINE Alu 1 161 -151 1562 183 3 34 chr17 18305656 18305951 -71198602 + AluJo SINE Alu 1 286 -26 408 20 0 0 chr17 18305952 18306001 -71198552 + (CA)n Simple_repeat Simple_repeat 2 50 0 300 269 131 34 chr17 18306043 18306218 -71198335 + L1ME4a LINE L1 5743 5934 -187 2088 104 0 63 chr17 18306311 18306482 -71198071 - AluSq SINE Alu -14 299 156 2235 100 3 10 chr17 18306482 18306782 -71197771 - AluSp SINE Alu -15 298 1 2088 104 0 63 chr17 18306782 18306928 -71197625 - AluSq SINE Alu -157 156 2 2171 117 0 16 chr17 18307108 18307417 -71197136 - AluSg SINE Alu -6 304 1 189 0 0 0 chr17 18308497 18308518 -71196035 + (ATG)n Simple_repeat Simple_repeat 2 22 0 1157 133 12 0 chr17 18308518 18308691 -71195862 - AluJb SINE Alu -29 283 109 2061 116 60 0 chr17 18308755 18309039 -71195514 + AluSx SINE Alu 1 301 -11 931 286 46 40 chr17 18309122 18309371 -71195182 + L1MC4a LINE L1 5317 5563 -2245 2196 106 25 43 chr17 18309371 18309719 -71194834 - L1MB3 LINE L1 -7 6176 5823 1648 97 5 0 chr17 18309719 18309935 -71194618 - AluSq SINE Alu -16 297 81 2252 112 0 13 chr17 18309935 18310239 -71194314 - AluSx SINE Alu -11 301 2 2243 87 0 13 chr17 18310243 18310542 -71194011 - AluSc SINE Alu -14 295 1 2196 106 25 43 chr17 18310542 18310585 -71193968 - L1MB3 LINE L1 -362 5821 5786 931 286 46 40 chr17 18310585 18310878 -71193675 + L1MC4a LINE L1 5563 5862 -1946 2214 87 10 10 chr17 18311457 18311755 -71192798 - AluSq SINE Alu -15 298 1 334 123 0 62 chr17 18311772 18311853 -71192700 - AluJ/FRAM SINE Alu 0 302 227 1239 134 13 31 chr17 18312132 18312315 -71192238 - AluJo SINE Alu -8 304 124 303 85 0 0 chr17 18312315 18312362 -71192191 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1239 134 13 31 chr17 18312362 18312402 -71192151 - AluJo SINE Alu -188 124 85 416 39 0 0 chr17 18312402 18312453 -71192100 - AluSg/x SINE Alu -62 250 200 858 117 8 8 chr17 18312458 18312586 -71191967 - FLAM_C SINE Alu -13 130 3 2334 76 0 7 chr17 18312627 18312928 -71191625 + AluY SINE Alu 1 299 -12 2001 100 62 3 chr17 18312928 18313218 -71191335 + AluSx SINE Alu 1 307 -5 978 166 0 0 chr17 18313225 18313382 -71191171 + FRAM SINE Alu 1 152 -24 2033 101 59 7 chr17 18313519 18313806 -71190747 - AluSg SINE Alu -8 302 1 1541 181 46 3 chr17 18313884 18314166 -71190387 + AluSx SINE Alu 1 294 -18 1629 132 77 18 chr17 18314175 18314292 -71190261 + AluSx SINE Alu 1 110 -202 2148 133 3 3 chr17 18314292 18314593 -71189960 + AluSx SINE Alu 1 301 -11 1629 132 77 18 chr17 18314593 18314748 -71189805 + AluSx SINE Alu 110 289 -23 544 152 0 0 chr17 18314749 18314828 -71189725 + AluSg/x SINE Alu 210 288 -22 1099 97 0 7 chr17 18314865 18315010 -71189543 + AluSg SINE Alu 1 144 -166 2042 134 14 0 chr17 18315011 18315303 -71189250 + AluSx SINE Alu 2 297 -15 685 177 15 15 chr17 18315396 18315526 -71189027 + AluJo/FLAM SINE Alu 3 132 -170 1447 114 0 68 chr17 18315528 18315748 -71188805 + AluSx SINE Alu 1 205 -107 456 270 28 24 chr17 18315748 18315959 -71188594 - LTR4 LTR ERV1 0 596 385 496 185 0 0 chr17 18316362 18316443 -71188110 + AluSx SINE Alu 199 279 -30 1845 139 49 0 chr17 18316488 18316799 -71187754 - AluSx SINE Alu 0 312 1 1496 117 5 0 chr17 18317002 18317199 -71187354 + AluSc SINE Alu 1 198 -111 362 224 14 6 chr17 18317326 18317484 -71187069 + MIR SINE MIR 18 261 -1 472 156 0 0 chr17 18317516 18317593 -71186960 + AluSg/x SINE Alu 190 266 -44 1895 174 0 0 chr17 18317607 18317888 -71186665 + AluSx SINE Alu 2 282 -30 2204 113 3 7 chr17 18317907 18318208 -71186345 + AluSp SINE Alu 1 300 -13 392 198 0 12 chr17 18318232 18318318 -71186235 + MER103 DNA DNA 21 105 -61 2401 98 3 0 chr17 18318583 18318889 -71185664 + AluSq SINE Alu 1 307 -6 2248 113 0 0 chr17 18318899 18319199 -71185354 + AluSq SINE Alu 1 300 -13 1071 111 0 0 chr17 18319223 18319367 -71185186 + AluSg/x SINE Alu 163 306 -4 576 184 37 9 chr17 18320022 18320131 -71184422 - AluJ SINE Alu -16 296 185 840 156 0 16 chr17 18320139 18320267 -71184286 - AluJ SINE Alu -186 126 1 785 191 26 42 chr17 18320337 18320526 -71184027 - AluJo SINE Alu -7 305 120 426 201 129 14 chr17 18320556 18320695 -71183858 - MIR SINE MIR -96 166 12 1358 108 0 5 chr17 18320766 18320952 -71183601 - AluSg/x SINE Alu -5 305 121 2109 123 3 0 chr17 18321157 18321442 -71183111 + AluSx SINE Alu 1 286 -26 1077 187 57 5 chr17 18321755 18321964 -71182589 - AluJo SINE Alu -92 220 1 964 161 161 3 chr17 18321964 18322356 -71182197 - MER21B LTR ERV1 -371 492 20 1985 123 30 7 chr17 18322931 18323232 -71181321 + AluSx SINE Alu 1 308 -4 374 241 58 0 chr17 18323628 18323715 -71180838 + FRAM SINE Alu 60 151 -15 1761 116 21 0 chr17 18323730 18323971 -71180582 - AluSc SINE Alu -25 284 39 1878 90 11 19 chr17 18326563 18326829 -71177724 - AluSp SINE Alu -17 296 33 1959 96 32 7 chr17 18326936 18327217 -71177336 + AluSq SINE Alu 2 289 -24 763 182 52 13 chr17 18327313 18327467 -71177086 + FRAM SINE Alu 1 159 -17 2238 125 0 0 chr17 18327914 18328225 -71176328 + AluSx SINE Alu 1 311 -1 716 158 7 43 chr17 18328237 18328376 -71176177 + AluJo SINE Alu 1 134 -178 32 0 0 0 chr17 18328520 18328552 -71176001 + AT_rich Low_complexity Low_complexity 1 32 0 1256 154 0 22 chr17 18328559 18328646 -71175907 + AluJb SINE Alu 1 88 -224 2001 130 7 7 chr17 18328646 18328984 -71175569 + AluSx SINE Alu 1 338 0 1256 154 0 22 chr17 18328984 18329141 -71175412 + AluJb SINE Alu 88 291 -21 1161 187 91 9 chr17 18329157 18329376 -71175177 - AluJo SINE Alu -73 239 3 421 265 103 20 chr17 18329376 18329636 -71174917 - L1MC4a LINE L1 -341 5780 5598 2164 85 10 17 chr17 18329636 18329931 -71174622 - AluSq SINE Alu -20 293 1 421 265 103 20 chr17 18329931 18329959 -71174594 - L1MC4a LINE L1 -523 5598 5574 2236 99 6 6 chr17 18330013 18330325 -71174228 - AluSx SINE Alu 0 312 1 678 188 7 22 chr17 18330361 18330499 -71174054 + AluJo SINE Alu 3 138 -174 2161 111 7 3 chr17 18330506 18330804 -71173749 + AluY SINE Alu 1 299 -12 2228 98 3 0 chr17 18330815 18331101 -71173452 + AluSp SINE Alu 7 293 -20 22 0 0 0 chr17 18331101 18331123 -71173430 + AT_rich Low_complexity Low_complexity 1 22 0 981 160 30 0 chr17 18331123 18331292 -71173261 + AluJo SINE Alu 123 296 -16 1983 134 0 4 chr17 18331355 18331668 -71172885 - AluSg SINE Alu 0 316 5 1946 203 10 0 chr17 18331703 18332108 -71172445 + L1PA15-16 LINE L1 2278 2686 -4163 781 274 30 6 chr17 18332114 18332446 -71172107 + L1PA15-16 LINE L1 3476 3815 -3034 * 4491 227 26 8 chr17 18332424 18333571 -71170982 + L1PA15-16 LINE L1 4465 5632 -1217 472 356 91 9 chr17 18333742 18333961 -71170592 + HAL1 LINE L1 119 355 -2152 360 279 97 47 chr17 18334184 18334586 -71169967 + HAL1 LINE L1 700 1121 -1386 180 188 25 12 chr17 18334654 18334734 -71169819 + (TA)n Simple_repeat Simple_repeat 1 81 0 420 240 62 122 chr17 18334743 18335047 -71169506 - MER93a LTR ERV1 0 402 117 282 235 43 0 chr17 18335193 18335308 -71169245 + (CATATA)n Simple_repeat Simple_repeat 5 124 0 242 193 42 60 chr17 18335312 18335478 -71169075 + (TATAA)n Simple_repeat Simple_repeat 5 167 0 858 277 75 12 chr17 18335531 18335960 -71168593 + HAL1 LINE L1 1323 1778 -729 368 228 35 18 chr17 18335990 18336104 -71168449 + LTR16A LTR ERVL 20 135 -315 1362 203 19 0 chr17 18336340 18336651 -71167902 - L1MA4 LINE L1 -81 6219 5903 21 0 0 0 chr17 18336657 18336678 -71167875 + AT_rich Low_complexity Low_complexity 1 21 0 267 31 0 0 chr17 18337578 18337610 -71166943 + (TG)n Simple_repeat Simple_repeat 2 33 0 28 29 0 0 chr17 18338752 18338787 -71165766 + AT_rich Low_complexity Low_complexity 1 35 0 1214 177 23 0 chr17 18339207 18339472 -71165081 + L1MA6 LINE L1 6030 6300 0 23 33 0 0 chr17 18340113 18340143 -71164410 + AT_rich Low_complexity Low_complexity 1 30 0 1445 259 41 43 chr17 18340653 18341286 -71163267 - L1ME1 LINE L1 -116 6050 5419 3968 178 19 41 chr17 18341286 18342167 -71162386 + L1MA3 LINE L1 5443 6304 -1 30 59 0 0 chr17 18342197 18342248 -71162305 + AT_rich Low_complexity Low_complexity 1 51 0 24 53 0 0 chr17 18342527 18342565 -71161988 + AT_rich Low_complexity Low_complexity 1 38 0 1307 153 4 0 chr17 18342965 18343193 -71161360 + L1MA3 LINE L1 6077 6305 0 1949 128 7 30 chr17 18343282 18343579 -71160974 + AluSc SINE Alu 1 290 -19 22 35 0 0 chr17 18343948 18343977 -71160576 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr17 18345218 18345254 -71159299 + AT_rich Low_complexity Low_complexity 1 36 0 1227 92 82 0 chr17 18345906 18346090 -71158463 - THE1B LTR MaLR -165 199 1 11494 101 4 5 chr17 18346091 18347672 -71156881 - THE1B-int LTR MaLR -1 1579 1 1927 122 49 35 chr17 18347681 18348025 -71156528 - THE1B LTR MaLR -15 349 1 210 37 0 0 chr17 18348077 18348104 -71156449 + (TG)n Simple_repeat Simple_repeat 1 27 0 2348 90 0 10 chr17 18348332 18348633 -71155920 - AluSp SINE Alu -15 298 1 225 169 85 0 chr17 18349237 18349296 -71155257 + LTR66 LTR ERVL 376 439 -171 33 56 0 0 chr17 18349503 18349557 -71154996 + AT_rich Low_complexity Low_complexity 1 54 0 1838 184 0 0 chr17 18350514 18350813 -71153740 + AluSx SINE Alu 1 299 -13 191 296 93 0 chr17 18351337 18351391 -71153162 + L3b LINE CR1 1278 1336 -247 1053 128 26 0 chr17 18352843 18352999 -71151554 + AluSp SINE Alu 135 294 -19 2413 55 3 0 chr17 18353010 18353303 -71151250 + AluY SINE Alu 1 294 -17 1614 145 65 11 chr17 18353526 18353802 -71150751 + AluSx SINE Alu 14 304 -8 48 67 0 0 chr17 18354052 18354142 -71150411 + AT_rich Low_complexity Low_complexity 1 90 0 1496 248 69 17 chr17 18354941 18355421 -71149132 + MLT1D LTR MaLR 1 505 0 305 278 165 42 chr17 18355434 18355937 -71148616 - L1ME3A LINE L1 -241 5929 5362 1279 206 4 7 chr17 18555981 18556253 -70948300 - MLT1A1 LTR MaLR -94 271 1 1211 217 145 69 chr17 18556258 18556667 -70947886 - L1M4 LINE L1 -3013 3133 2656 2170 55 98 0 chr17 18556667 18556942 -70947611 + AluY SINE Alu 1 302 -9 1211 217 145 69 chr17 18556942 18557172 -70947381 - L1M4 LINE L1 -3490 2656 2445 288 0 0 0 chr17 18557199 18557231 -70947322 + (T)n Simple_repeat Simple_repeat 1 32 0 567 208 0 15 chr17 18557231 18557361 -70947192 - AluY SINE Alu -179 132 5 252 0 0 0 chr17 18557417 18557445 -70947108 + (T)n Simple_repeat Simple_repeat 1 28 0 535 233 35 47 chr17 18557677 18557849 -70946704 - L2 LINE L2 -1304 2010 1841 951 101 0 0 chr17 18557895 18558024 -70946529 - AluSg/x SINE Alu 0 310 182 1073 157 164 0 chr17 18558032 18558325 -70946228 + L1MA8 LINE L1 5947 6287 -4 2046 112 3 30 chr17 18559379 18559683 -70944870 + AluSg SINE Alu 1 296 -14 1691 190 10 0 chr17 18559688 18559983 -70944570 + AluJb SINE Alu 1 298 -14 207 0 0 0 chr17 18560038 18560061 -70944492 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1450 174 55 4 chr17 18560061 18560309 -70944244 - AluSx SINE Alu -28 284 24 405 211 0 98 chr17 18560316 18560373 -70944180 - L1M4 LINE L1 -1973 4173 4133 2030 102 7 17 chr17 18560373 18560666 -70943887 - AluSx SINE Alu 0 312 23 405 211 0 98 chr17 18560666 18560731 -70943822 - L1M4 LINE L1 -2013 4133 4063 2009 139 0 31 chr17 18560764 18561087 -70943466 - AluSq SINE Alu 0 313 1 560 89 0 11 chr17 18561088 18561178 -70943375 - Alu SINE Alu 0 312 224 879 139 0 8 chr17 18561529 18561658 -70942895 + AluJo/FLAM SINE Alu 1 128 -184 467 154 64 0 chr17 18561661 18561739 -70942814 - AluSg/x SINE Alu -20 290 208 435 19 0 0 chr17 18561742 18561794 -70942759 + (CA)n Simple_repeat Simple_repeat 1 52 0 21 71 0 0 chr17 18563066 18563108 -70941445 + AT_rich Low_complexity Low_complexity 1 42 0 2326 110 0 3 chr17 18563486 18563796 -70940757 - AluSc SINE Alu 0 309 1 1355 145 16 21 chr17 18563811 18564053 -70940500 + LOR1b LTR ERV1 221 461 0 344 132 29 0 chr17 18564135 18564203 -70940350 + CT-rich Low_complexity Low_complexity 1 70 0 2305 97 7 0 chr17 18564203 18564502 -70940051 - AluSx SINE Alu -11 301 1 330 296 115 115 chr17 18564601 18565305 -70939248 - L1M2 LINE L1 -5630 1219 516 881 80 0 0 chr17 18566076 18566189 -70938364 + AluSg SINE Alu 1 113 -197 2151 74 0 14 chr17 18566488 18566804 -70937749 + AluY SINE Alu 1 312 0 536 146 0 64 chr17 18566805 18566915 -70937638 + U6 snRNA snRNA 4 106 -1 229 327 83 39 chr17 18567577 18567733 -70936820 - MIR SINE MIR -41 221 59 2420 47 10 0 chr17 18568327 18568624 -70935929 - AluY SINE Alu -11 300 1 21 0 0 0 chr17 18568713 18568734 -70935819 + AT_rich Low_complexity Low_complexity 1 21 0 2216 165 21 28 chr17 18568764 18569200 -70935353 - Tigger2a DNA MER2_type 0 434 2 1646 176 33 10 chr17 18569309 18569610 -70934943 + AluJo SINE Alu 1 308 -4 1802 160 3 39 chr17 18570316 18570628 -70933925 + AluJo SINE Alu 1 301 -11 2043 128 3 0 chr17 18571034 18571323 -70933230 - AluSx SINE Alu -22 290 1 2224 112 3 19 chr17 18571359 18571673 -70932880 + AluSc SINE Alu 1 309 0 254 261 0 0 chr17 18571720 18571785 -70932768 - MLT1L LTR MaLR -5 610 546 555 308 125 9 chr17 18571856 18572184 -70932369 - MLT1L LTR MaLR -245 370 5 610 264 155 0 chr17 18572257 18572450 -70932103 - MER58A DNA MER1_type 0 224 2 305 317 131 57 chr17 18572820 18573362 -70931191 - L2 LINE L2 -787 2527 1946 2382 61 0 13 chr17 18574374 18574684 -70929869 - AluY SINE Alu -5 306 1 536 259 9 0 chr17 18574700 18574808 -70929745 - FAM SINE Alu -76 109 1 2686 172 17 50 chr17 18575169 18575750 -70928803 - MER68 LTR ERV1 0 562 1 23 0 0 0 chr17 18575785 18575808 -70928745 + AT_rich Low_complexity Low_complexity 1 23 0 2055 169 19 19 chr17 18576334 18576748 -70927805 - L1MC1 LINE L1 -14 6319 5906 561 161 0 0 chr17 18577731 18577824 -70926729 - Tigger7 DNA MER2_type 0 2487 2395 22 0 0 0 chr17 18578538 18578560 -70925993 + AT_rich Low_complexity Low_complexity 1 22 0 352 221 0 0 chr17 18578561 18578656 -70925897 - Charlie1 DNA MER1_type -45 2716 2622 2415 65 3 0 chr17 18578665 18578971 -70925582 + AluY SINE Alu 1 307 -4 575 234 126 0 chr17 18579018 18579185 -70925368 - Charlie1 DNA MER1_type -2562 199 12 2497 53 0 7 chr17 18579314 18579616 -70924937 + AluY SINE Alu 1 300 -11 23 54 0 0 chr17 18579857 18579894 -70924659 + AT_rich Low_complexity Low_complexity 1 37 0 2075 110 0 21 chr17 18580955 18581246 -70923307 + AluSg SINE Alu 16 300 -10 224 200 22 0 chr17 18581819 18581864 -70922689 + L2 LINE L2 3263 3308 -5 28 29 0 0 chr17 18582079 18582114 -70922439 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr17 18582811 18582839 -70921714 + AT_rich Low_complexity Low_complexity 1 28 0 2171 137 0 12 chr17 18585203 18585525 -70919028 + 7SLRNA srpRNA srpRNA 3 320 0 261 0 0 0 chr17 18586282 18586311 -70918242 + (A)n Simple_repeat Simple_repeat 1 29 0 27 0 0 0 chr17 18586637 18586664 -70917889 + AT_rich Low_complexity Low_complexity 1 27 0 2210 132 6 0 chr17 18587003 18587314 -70917239 + AluSp SINE Alu 1 313 0 432 284 102 25 chr17 18587396 18587632 -70916921 + L1MC/D LINE L1 5387 5640 -2168 322 202 61 53 chr17 18587740 18587854 -70916699 + L1MCa LINE L1 1992 2106 -4320 281 261 0 0 chr17 18588284 18588349 -70916204 - MER58A DNA MER1_type 0 224 160 328 315 11 0 chr17 18588355 18588444 -70916109 - MER58A DNA MER1_type -17 90 1 2843 274 135 45 chr17 18589015 18590408 -70914145 + L2 LINE L2 1778 3307 -6 198 103 0 0 chr17 18590464 18590493 -70914060 + (A)n Simple_repeat Simple_repeat 1 29 0 200 35 35 0 chr17 18591375 18591404 -70913149 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2372 45 42 0 chr17 18591966 18592255 -70912298 - AluY SINE Alu -10 301 1 2338 86 16 0 chr17 18592261 18592565 -70911988 - AluSc SINE Alu 0 309 1 421 287 179 31 chr17 18593309 18593532 -70911021 - L2 LINE L2 -1407 1907 1652 2449 100 0 0 chr17 18593998 18594308 -70910245 - AluSg SINE Alu 0 310 1 21 0 0 0 chr17 18594315 18594336 -70910217 + AT_rich Low_complexity Low_complexity 1 21 0 214 189 0 0 chr17 18594443 18594480 -70910073 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 715 264 32 37 chr17 18594695 18594911 -70909642 + MIR SINE MIR 23 237 -25 234 313 53 91 chr17 18596077 18596285 -70908268 + L2 LINE L2 2586 2785 -529 345 248 149 14 chr17 18596364 18596505 -70908048 - L1MA10 LINE L1 -9 6325 6166 841 230 4 32 chr17 18596512 18596760 -70907793 - L1MC/D LINE L1 -2192 5593 5353 650 260 68 0 chr17 18596873 18597050 -70907503 - MER58A DNA MER1_type -34 190 2 3213 220 96 82 chr17 18597050 18597527 -70907026 - L1MC/D LINE L1 -1923 4223 3755 2618 168 14 14 chr17 18597527 18598039 -70906514 - L1MC1 LINE L1 -1 6332 5821 3213 220 96 82 chr17 18598039 18598668 -70905885 - L1MC/D LINE L1 -2391 3755 3137 1816 179 43 6 chr17 18598668 18599020 -70905533 - MLT1A1 LTR MaLR 0 365 1 3213 220 96 82 chr17 18599020 18599434 -70905119 - L1MC/D LINE L1 -3009 3137 2670 2181 51 98 0 chr17 18599434 18599709 -70904844 + AluY SINE Alu 1 302 -9 3213 220 96 82 chr17 18599709 18599939 -70904614 - L1MC/D LINE L1 -3476 2670 2445 306 0 0 0 chr17 18599966 18600000 -70904553 + (T)n Simple_repeat Simple_repeat 1 34 0 1080 76 0 0 chr17 18600000 18600132 -70904421 - AluY SINE Alu -179 132 1 1261 257 41 38 chr17 18600180 18600691 -70903862 - L1MEc LINE L1 -3746 2471 1994 1740 120 0 4 chr17 18600691 18600958 -70903595 + L1PB1 LINE L1 5879 6144 -7 1261 257 41 38 chr17 18600958 18601010 -70903543 - L1MEc LINE L1 -4223 1994 1944 295 231 19 10 chr17 18601145 18601249 -70903304 - L1MEc LINE L1 -5264 1132 1028 2550 48 0 10 chr17 18601276 18601590 -70902963 + AluY SINE Alu 1 311 0 1483 301 68 14 chr17 18601621 18602286 -70902267 - L1MEc LINE L1 -5656 740 40 482 292 187 30 chr17 18602292 18602624 -70901929 + L2 LINE L2 2929 3312 -1 1088 226 63 19 chr17 18603249 18603519 -70901034 - AluJo SINE Alu -30 282 1 5343 114 20 10 chr17 18603766 18604732 -70899821 - L1PB3 LINE L1 0 6154 5162 1696 113 13 0 chr17 18604732 18604991 -70899562 - AluSp SINE Alu 0 303 42 459 71 0 0 chr17 18604991 18605047 -70899506 + Alu SINE Alu 235 290 -19 544 125 0 11 chr17 18605053 18605141 -70899412 - L1PB3 LINE L1 -43 6111 6025 387 0 0 0 chr17 18605142 18605185 -70899368 + (TA)n Simple_repeat Simple_repeat 1 43 0 872 144 0 0 chr17 18605203 18605328 -70899225 - FLAM_C SINE Alu -7 136 12 3439 194 68 4 chr17 18605338 18605927 -70898626 - L1PB3 LINE L1 -1144 5002 4341 207 114 0 0 chr17 18605927 18605962 -70898591 + (TTG)n Simple_repeat Simple_repeat 3 37 0 3439 194 68 4 chr17 18605962 18606212 -70898341 - L1PB3 LINE L1 -1805 4341 4109 261 0 0 0 chr17 18607965 18607994 -70896559 + (CA)n Simple_repeat Simple_repeat 2 30 0 2019 81 0 11 chr17 18608457 18608729 -70895824 + AluY SINE Alu 40 308 -3 1920 149 3 13 chr17 18609054 18609356 -70895197 + AluJb SINE Alu 1 299 -13 198 0 0 0 chr17 18611433 18611455 -70893098 + (T)n Simple_repeat Simple_repeat 1 22 0 1105 81 0 0 chr17 18611474 18611610 -70892943 - AluSq/x SINE Alu -177 136 1 414 320 59 0 chr17 18611874 18612027 -70892526 - L2 LINE L2 -431 2883 2722 2840 0 0 0 chr17 18612361 18612665 -70891888 - AluYa5 SINE Alu -7 304 1 27 62 0 0 chr17 18612972 18613020 -70891533 + AT_rich Low_complexity Low_complexity 1 48 0 699 147 7 33 chr17 18613521 18613671 -70890882 - L1MB8 LINE L1 -1 6177 6032 3454 167 27 14 chr17 18613676 18614443 -70890110 - L1MB8 LINE L1 -208 5970 5188 28 29 0 0 chr17 18614450 18614485 -70890068 + AT_rich Low_complexity Low_complexity 1 35 0 864 142 8 0 chr17 18614485 18614605 -70889948 - FLAM_C SINE Alu -22 121 1 1096 208 143 5 chr17 18614607 18614986 -70889567 - L1MB8 LINE L1 -945 5201 4771 819 261 104 17 chr17 18616351 18616778 -70887775 - MLT1G1 LTR MaLR -2 593 45 612 242 0 0 chr17 18616821 18616945 -70887608 - FLAM_A SINE Alu -18 124 1 866 140 12 7 chr17 18616955 18617130 -70887423 - L1MA3 LINE L1 -7 6298 6118 1173 122 0 6 chr17 18617140 18617304 -70887249 + AluSg/x SINE Alu 134 296 -14 3618 166 29 46 chr17 18617307 18618840 -70885713 - L1MA5 LINE L1 -196 6104 4600 4630 152 22 29 chr17 18618882 18619917 -70884636 - L1PA16 LINE L1 -1 6816 5792 195 186 0 0 chr17 18621470 18621513 -70883040 + T-rich Low_complexity Low_complexity 1 43 0 210 176 0 59 chr17 18621542 18621593 -70882960 + CT-rich Low_complexity Low_complexity 2 49 0 196 54 0 89 chr17 18622057 18622113 -70882440 + (TCCC)n Simple_repeat Simple_repeat 1 51 0 8935 239 44 50 chr17 18622116 18623237 -70881316 - L1PA16 LINE L1 -998 5799 4673 712 188 0 40 chr17 18623237 18623386 -70881167 - FLAM_C SINE Alu 0 143 1 8935 239 44 50 chr17 18623386 18624175 -70880378 - L1PA16 LINE L1 -2124 4673 3881 294 29 0 0 chr17 18624175 18624210 -70880343 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 8935 239 44 50 chr17 18624210 18626521 -70878032 - L1PA16 LINE L1 -2916 3881 1495 2241 130 0 12 chr17 18627260 18627598 -70876955 + MER1B DNA MER1_type 4 337 0 241 329 6 49 chr17 18627697 18627861 -70876692 - L1PA16 LINE L1 -5268 1519 1363 888 346 33 23 chr17 18627898 18628473 -70876080 - L1PA16 LINE L1 -6206 581 1 1448 174 29 80 chr17 18628494 18628971 -70875582 - L1 LINE L1 -1536 5672 5220 * 5950 232 85 25 chr17 18628964 18630199 -70874354 - L1 LINE L1 -2399 4809 3649 182 37 37 0 chr17 18630199 18630226 -70874327 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 5950 232 85 25 chr17 18630226 18630751 -70873802 - L1 LINE L1 -3559 3649 3157 1956 162 0 13 chr17 18630751 18631066 -70873487 - AluSx SINE Alu -1 311 1 5950 232 85 25 chr17 18631066 18633003 -70871550 - L1 LINE L1 -4051 3157 841 798 235 5 0 chr17 18633095 18633305 -70871248 - L1 LINE L1 -6628 581 13 322 250 0 25 chr17 18634552 18634632 -70869921 - Tigger5 DNA MER2_type -2244 79 2 1045 283 142 20 chr17 18635008 18635501 -70869052 - MLT1G1 LTR MaLR 0 595 2 2143 78 19 42 chr17 18636250 18636558 -70867995 + AluY SINE Alu 1 301 -10 504 184 9 0 chr17 18638710 18638819 -70865734 - L1MA9 LINE L1 -39 6273 6164 881 196 0 46 chr17 18640458 18640631 -70863922 + FAM SINE Alu 2 166 -9 1713 131 3 82 chr17 18641126 18641501 -70863052 - MER4A LTR ERV1 0 664 261 569 124 21 10 chr17 18641501 18641598 -70862955 - MER4A LTR ERV1 -566 98 1 2199 110 6 31 chr17 18641670 18641987 -70862566 + AluSx SINE Alu 1 309 -3 2353 103 0 0 chr17 18642224 18642526 -70862027 + AluSx SINE Alu 2 303 -9 4744 75 29 15 chr17 18643084 18643735 -70860818 - PABL_A LTR ERV1 0 660 1 2250 120 0 0 chr17 18645027 18645335 -70859218 - AluSg SINE Alu 0 310 3 2420 90 0 0 chr17 18645349 18645660 -70858893 - AluY SINE Alu 0 311 1 335 274 53 26 chr17 18645740 18645853 -70858700 + MIR3 SINE MIR 45 160 -48 278 291 159 72 chr17 18647675 18648174 -70856379 + L2 LINE L2 2745 3272 0 1573 201 7 3 chr17 18648378 18648686 -70855867 + AluJb SINE Alu 1 309 0 1214 238 119 9 chr17 18649449 18649878 -70854675 - L1MC4 LINE L1 -150 7892 7417 7658 149 8 1 chr17 18649897 18652018 -70852535 - L1PA11 LINE L1 -1 7611 5484 12964 183 16 18 chr17 18652019 18653580 -70850973 + L1PB1 LINE L1 2801 4363 -2504 2104 153 22 30 chr17 18653580 18653947 -70850606 + THE1B LTR MaLR 1 364 0 12964 183 16 18 chr17 18653947 18654732 -70849821 + L1PB1 LINE L1 4363 5148 -1719 180 0 0 0 chr17 18654732 18654752 -70849801 + (TAA)n Simple_repeat Simple_repeat 2 21 0 12964 183 16 18 chr17 18654752 18656483 -70848070 + L1PB1 LINE L1 5148 6865 -2 8833 207 13 6 chr17 18656488 18659205 -70845348 - L1PA11 LINE L1 -2932 4652 1130 666 169 34 72 chr17 18659228 18659435 -70845118 - L1MC4 LINE L1 -635 7407 7209 938 205 48 92 chr17 18659485 18659876 -70844677 - L1MD3 LINE L1 0 8041 7682 380 250 0 19 chr17 18659924 18660032 -70844521 - L1P3 LINE L1 -5073 1388 1283 1876 263 106 70 chr17 18660034 18661042 -70843511 - L1MC4a LINE L1 -250 7558 6515 786 205 44 44 chr17 18661043 18661248 -70843305 - Tigger2 DNA MER2_type -3 2715 2511 459 191 0 0 chr17 18661248 18661342 -70843211 - L1 LINE L1 -1458 4688 4595 * 757 206 0 0 chr17 18661339 18661509 -70843044 + L1P LINE L1 4724 4893 -1253 2290 130 29 11 chr17 18661510 18662136 -70842417 - L1P4 LINE L1 -529 5636 5000 403 143 0 0 chr17 18662136 18662192 -70842361 - AluJ/FLAM SINE Alu -255 57 2 1043 113 0 0 chr17 18663500 18663641 -70840912 + AluSp/q SINE Alu 157 297 -16 2276 91 3 7 chr17 18663643 18663987 -70840566 + AluSp SINE Alu 1 343 0 199 192 10 162 chr17 18664471 18664570 -70839983 + MER5A DNA MER1_type 1 84 -105 188 345 48 12 chr17 18664629 18664713 -70839840 - MER5A DNA MER1_type -102 87 1 185 333 234 12 chr17 18664860 18665031 -70839522 - MIR SINE MIR -18 244 36 460 279 124 63 chr17 18665033 18665348 -70839205 + MER102b DNA MER1_type 1 334 -7 1274 167 9 32 chr17 18665816 18666032 -70838521 - AluJb SINE Alu -25 287 77 2031 149 13 10 chr17 18666065 18666373 -70838180 + AluJb SINE Alu 1 309 -3 2281 108 13 0 chr17 18666484 18666791 -70837762 - AluSp SINE Alu -2 311 1 224 248 238 9 chr17 18666947 18667052 -70837501 - MIR SINE MIR -17 245 117 2082 119 8 72 chr17 18667448 18667808 -70836745 - MER1B DNA MER1_type 0 337 1 680 286 91 35 chr17 18668135 18668621 -70835932 + L1ME4a LINE L1 5608 6120 -1 1648 140 0 0 chr17 18668701 18668929 -70835624 + AluJb SINE Alu 85 312 0 1736 151 60 17 chr17 18670825 18671124 -70833429 - AluJo SINE Alu 0 312 1 2275 132 0 3 chr17 18672085 18672396 -70832157 - AluSx SINE Alu -2 310 1 2221 96 0 54 chr17 18672592 18672905 -70831648 - AluY SINE Alu -15 296 1 344 223 0 29 chr17 18672917 18673020 -70831533 - L1ME2 LINE L1 -1 6163 6064 377 311 148 27 chr17 18673838 18674021 -70830532 + MIR SINE MIR 34 238 -24 637 212 65 54 chr17 18674062 18674105 -70830448 + Charlie1 DNA MER1_type 32 73 -2688 1949 132 0 21 chr17 18674105 18674428 -70830125 - AluJb SINE Alu 0 317 1 637 212 65 54 chr17 18674428 18674567 -70829986 + Charlie1 DNA MER1_type 73 217 -2544 423 183 54 0 chr17 18674581 18674674 -70829879 + Charlie1 DNA MER1_type 2634 2731 -30 247 250 52 73 chr17 18674710 18674806 -70829747 + MIR SINE MIR 162 255 -7 1620 177 50 3 chr17 18675733 18676016 -70828537 + AluJo SINE Alu 3 298 -14 2354 96 0 29 chr17 18676550 18676862 -70827691 + AluSx SINE Alu 1 303 -9 2174 107 0 4 chr17 18676918 18677230 -70827323 + AluSc SINE Alu 1 311 0 21 71 0 0 chr17 18678771 18678813 -70825740 + AT_rich Low_complexity Low_complexity 1 42 0 1775 131 6 68 chr17 18679820 18680156 -70824397 + MER1B DNA MER1_type 1 315 -24 1012 229 9 0 chr17 18680214 18680428 -70824125 - MER20 DNA MER1_type 0 219 4 299 327 9 9 chr17 18680455 18680568 -70823985 - L2 LINE L2 -951 2363 2251 358 332 95 43 chr17 18680835 18681046 -70823507 - MIR SINE MIR -13 249 28 243 250 12 6 chr17 18681844 18682004 -70822549 + (TG)n Simple_repeat Simple_repeat 1 161 0 199 262 6 6 chr17 18682031 18682199 -70822354 + (TG)n Simple_repeat Simple_repeat 1 168 0 234 195 0 0 chr17 18682253 18682294 -70822259 + L2 LINE L2 3016 3056 -216 296 275 12 12 chr17 18682438 18682518 -70822035 + L2 LINE L2 3229 3308 -5 491 232 252 0 chr17 18682876 18683027 -70821526 - MER5A DNA MER1_type 0 189 1 2056 103 35 35 chr17 18683215 18683526 -70821027 + AluY SINE Alu 1 311 0 319 216 221 7 chr17 18683573 18683710 -70820843 + MIR SINE MIR 16 183 -62 190 266 0 62 chr17 18683770 18683834 -70820719 + MIR SINE MIR 93 149 -59 442 261 244 17 chr17 18683927 18684165 -70820388 + L2 LINE L2 3021 3312 -1 279 346 96 13 chr17 18684753 18684909 -70819644 + MIR SINE MIR 13 181 -81 190 206 0 0 chr17 18684909 18684943 -70819610 + MER5A DNA MER1_type 1 34 -155 1921 143 0 7 chr17 18685407 18685686 -70818867 - AluSx SINE Alu -35 277 1 231 250 86 26 chr17 18685924 18686040 -70818513 + L1ME4a LINE L1 5559 5681 -440 756 241 6 13 chr17 18686047 18686205 -70818348 + AluJo SINE Alu 125 281 -31 243 0 0 0 chr17 18686208 18686235 -70818318 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 641 255 145 22 chr17 18686286 18686604 -70817949 + L1ME4a LINE L1 5730 6086 -35 812 206 99 97 chr17 18686946 18687368 -70817185 + MER113 DNA MER1_type? 48 470 -51 324 248 171 0 chr17 18687468 18687573 -70816980 + L2 LINE L2 3149 3271 -1 296 279 330 6 chr17 18687989 18688168 -70816385 - MIR SINE MIR -20 242 6 242 301 135 23 chr17 18688312 18688445 -70816108 - L2 LINE L2 -6 3266 3119 735 130 10 0 chr17 18688892 18688992 -70815561 - AluJ/FLAM SINE Alu -210 102 2 929 264 90 0 chr17 18688994 18689328 -70815225 - MER113 DNA MER1_type? -112 409 46 2525 61 0 0 chr17 18690162 18690455 -70814098 + AluY SINE Alu 14 306 -5 345 269 126 8 chr17 18691510 18691629 -70812924 + MIR SINE MIR 7 139 -123 578 258 138 84 chr17 18691642 18692033 -70812520 - L2 LINE L2 -20 3252 2841 2270 117 0 0 chr17 18692054 18692353 -70812200 + AluSx SINE Alu 1 299 -13 263 268 28 0 chr17 18692360 18692431 -70812122 + MIR SINE MIR 162 234 -28 266 169 153 0 chr17 18692883 18692942 -70811611 + L2 LINE L2 3204 3271 -1 835 155 23 0 chr17 18694976 18695105 -70809448 - FLAM_A SINE Alu 0 133 2 233 343 200 14 chr17 18695648 18695788 -70808765 - MER5A DNA MER1_type 0 189 24 332 294 112 37 chr17 18696149 18696316 -70808237 + MIR3 SINE MIR 8 183 -25 498 300 40 13 chr17 18696832 18696982 -70807571 + MIR3 SINE MIR 33 185 -42 211 302 0 0 chr17 18697385 18697471 -70807082 + (CCA)n Simple_repeat Simple_repeat 2 87 0 390 272 31 63 chr17 18698477 18698668 -70805885 + MIR SINE MIR 28 212 -50 4518 246 103 47 chr17 18700424 18700691 -70803862 + HAL1 LINE L1 102 353 -2154 2418 83 0 3 chr17 18700691 18700991 -70803562 + AluY SINE Alu 1 299 -12 4518 246 103 47 chr17 18700991 18701658 -70802895 + HAL1 LINE L1 353 981 -1526 1960 169 0 0 chr17 18701658 18701954 -70802599 - AluJb SINE Alu -16 296 1 4518 246 103 47 chr17 18701954 18703176 -70801377 + HAL1 LINE L1 981 2380 -127 3572 58 0 9 chr17 18703247 18703695 -70800858 + L1PA6 LINE L1 5711 6154 0 2373 88 0 10 chr17 18703700 18703996 -70800557 + AluY SINE Alu 1 293 -18 27 0 0 0 chr17 18704022 18704049 -70800504 + AT_rich Low_complexity Low_complexity 1 27 0 461 298 13 20 chr17 18704638 18704810 -70799743 + MIR SINE MIR 3 174 -88 215 280 0 0 chr17 18707635 18707710 -70796843 + (CCA)n Simple_repeat Simple_repeat 1 75 0 350 276 118 7 chr17 18708497 18708649 -70795904 + MIR3 SINE MIR 33 201 -7 420 268 39 0 chr17 18708728 18708855 -70795698 + MIR SINE MIR 20 151 -111 243 316 90 13 chr17 18709374 18709523 -70795030 - MIR SINE MIR -72 136 11 301 226 28 75 chr17 18709555 18709661 -70794892 - MIR SINE MIR -64 144 44 5801 130 26 35 chr17 18710095 18711073 -70793480 - LTR5 LTR ERVK 0 969 1 443 266 65 0 chr17 18712449 18712573 -70791980 + MIR SINE MIR 88 219 -43 347 269 108 38 chr17 18712598 18712784 -70791769 - L2 LINE L2 -12 3301 3103 203 326 22 56 chr17 18714222 18714311 -70790242 + MIR SINE MIR 61 146 -62 233 234 9 103 chr17 18715595 18715702 -70788851 - MIR SINE MIR -60 148 52 190 286 71 24 chr17 18721627 18721711 -70782842 - MIR3 SINE MIR -21 187 100 335 383 37 10 chr17 18723950 18724352 -70780201 + L2 LINE L2 2498 2910 -404 312 292 118 21 chr17 18725387 18725531 -70779022 + MIR3 SINE MIR 44 201 -7 216 0 0 0 chr17 18725862 18725886 -70778667 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 351 309 88 0 chr17 18726501 18726637 -70777916 + MIR SINE MIR 81 228 -34 23 0 0 0 chr17 18726664 18726687 -70777866 + AT_rich Low_complexity Low_complexity 1 23 0 1963 165 35 2 chr17 18727602 18728002 -70776551 + L1PB4 LINE L1 5539 5951 -205 1292 47 0 134 chr17 18728002 18728234 -70776319 - LTR14A LTR ERVK -143 201 1 232 240 27 40 chr17 18728302 18728377 -70776176 - MIR SINE MIR -133 129 56 541 288 76 0 chr17 18728427 18728611 -70775942 - L2 LINE L2 0 3313 3116 288 238 12 12 chr17 18728638 18728718 -70775835 - MER3 DNA MER1_type -5 204 125 2184 91 0 7 chr17 18728719 18729015 -70775538 + AluY SINE Alu 1 294 -17 1806 101 4 0 chr17 18730203 18730450 -70774103 + AluSx SINE Alu 53 300 -12 2198 113 6 0 chr17 18730845 18731156 -70773397 - AluSp SINE Alu 0 313 1 491 257 66 0 chr17 18731328 18731480 -70773073 - MER3 DNA MER1_type -47 162 1 311 277 227 29 chr17 18731574 18731917 -70772636 - L2 LINE L2 -351 2963 2553 202 261 0 58 chr17 18732328 18732397 -70772156 + L3b LINE CR1 1319 1383 -200 257 178 314 8 chr17 18732511 18732629 -70771924 + L2 LINE L2 2895 3048 -265 416 353 8 0 chr17 18732675 18732808 -70771745 + L2 LINE L2 3180 3313 0 267 278 14 0 chr17 18732905 18732977 -70771576 - MIR SINE MIR -74 134 62 184 145 161 32 chr17 18733766 18733828 -70770725 + L2 LINE L2 2884 2953 -360 257 319 52 7 chr17 18734035 18734170 -70770383 + MIR3 SINE MIR 51 191 -17 1266 270 67 45 chr17 18734721 18735344 -70769209 + L1MC4a LINE L1 5256 5892 -1916 331 291 119 0 chr17 18735920 18736054 -70768499 - MIR SINE MIR -100 162 13 334 295 130 25 chr17 18736417 18736617 -70767936 - MER69 DNA AcHobo -1989 537 317 397 263 51 40 chr17 18736652 18736827 -70767726 - MER69 DNA AcHobo -2319 207 31 209 238 95 0 chr17 18737539 18737602 -70766951 + L2 LINE L2 3189 3257 -56 320 272 132 9 chr17 18737714 18737828 -70766725 - MIR SINE MIR -117 145 18 1858 171 10 7 chr17 18738420 18738730 -70765823 + AluSx SINE Alu 1 311 -1 319 248 29 19 chr17 18738731 18738836 -70765717 + L1MC4 LINE L1 7933 8038 -4 467 353 59 28 chr17 18739002 18739356 -70765197 - L1ME4a LINE L1 -224 5897 5533 245 301 96 12 chr17 18739551 18739634 -70764919 + MIR SINE MIR 170 259 -3 493 303 117 0 chr17 18739643 18739831 -70764722 + MIR SINE MIR 43 252 -10 277 286 41 31 chr17 18740192 18740290 -70764263 - L3b LINE CR1 -140 1443 1345 998 253 54 39 chr17 18741407 18741739 -70762814 + L1ME3 LINE L1 5801 6137 -25 451 262 63 0 chr17 18741901 18742027 -70762526 - MER5A DNA MER1_type -49 140 7 1549 190 150 34 chr17 18742252 18742605 -70761948 - MSTD LTR MaLR 0 396 3 503 130 0 104 chr17 18743201 18743316 -70761237 + L1MB3 LINE L1 5607 5709 -474 578 115 0 0 chr17 18743316 18743394 -70761159 - AluSg/x SINE Alu -16 293 216 950 155 52 3 chr17 18743394 18743769 -70760784 + L1MB3 LINE L1 5706 6155 -28 2251 99 3 0 chr17 18743793 18744095 -70760458 + AluSx SINE Alu 1 303 -9 446 255 121 52 chr17 18744140 18744371 -70760182 - MLT1J LTR MaLR -46 465 219 1129 143 49 90 chr17 18744406 18744651 -70759902 - AluJo SINE Alu -77 235 1 232 231 154 0 chr17 18744776 18744854 -70759699 + LTR16A LTR ERVL 10 99 -351 353 309 48 5 chr17 18744945 18745133 -70759420 + LTR16B LTR ERVL 268 463 -1 277 265 15 0 chr17 18745134 18745202 -70759351 + L2 LINE L2 3230 3298 -15 311 313 109 43 chr17 18746549 18746760 -70757793 + L1MC/D LINE L1 5176 5400 -746 338 339 145 8 chr17 18746818 18747066 -70757487 + L1MC/D LINE L1 5437 5718 -2090 202 332 17 12 chr17 18747303 18747390 -70757163 + MIR SINE MIR 85 176 -32 236 233 14 41 chr17 18747468 18747541 -70757012 - MIR SINE MIR -127 135 65 697 270 70 7 chr17 18747675 18747975 -70756578 + LTR16C LTR ERVL 155 473 -18 192 255 78 0 chr17 18747989 18748040 -70756513 - MIR SINE MIR -188 74 20 607 130 84 97 chr17 18748046 18748200 -70756353 - FRAM SINE Alu -8 168 17 673 211 99 23 chr17 18749181 18749436 -70755117 - MLT1C LTR MaLR -185 282 1 472 331 15 11 chr17 18750449 18750617 -70753936 - L1ME4a LINE L1 -246 5875 5704 2068 107 33 0 chr17 18750617 18750916 -70753637 + AluSq SINE Alu 2 310 -3 472 331 15 11 chr17 18750916 18751007 -70753546 - L1ME4a LINE L1 -417 5704 5615 1362 220 18 0 chr17 18751129 18751411 -70753142 - AluJo SINE Alu -14 298 12 1848 151 3 16 chr17 18751504 18751808 -70752745 + AluSx SINE Alu 1 300 -12 1916 141 7 3 chr17 18751910 18752207 -70752346 - AluJb SINE Alu -10 302 5 3181 102 13 83 chr17 18752226 18752827 -70751726 + LTR8 LTR ERV1 132 690 -1 585 325 55 13 chr17 18754823 18755374 -70749179 - ERVL LTR ERVL -1140 4624 3963 25 0 0 0 chr17 18756022 18756047 -70748506 + AT_rich Low_complexity Low_complexity 1 25 0 186 143 0 0 chr17 18757531 18757566 -70746987 + (GGA)n Simple_repeat Simple_repeat 2 36 0 610 268 68 27 chr17 18758137 18758244 -70746309 + L1M4c LINE L1 2103 2204 -4180 2379 106 0 0 chr17 18758244 18758547 -70746006 + AluSg1 SINE Alu 1 303 -6 610 268 68 27 chr17 18758547 18758808 -70745745 + L1M4c LINE L1 2204 2486 -3898 271 177 63 0 chr17 18758846 18758925 -70745628 + L1MA9 LINE L1 6229 6312 0 771 256 19 55 chr17 18758939 18759044 -70745509 + L1MA10 LINE L1 6023 6130 -204 2340 100 0 3 chr17 18759044 18759343 -70745210 + AluSc SINE Alu 3 300 -9 771 256 19 55 chr17 18759343 18759546 -70745007 + L1MA10 LINE L1 6130 6320 -14 1487 249 83 30 chr17 18759556 18760415 -70744138 + L1MCa LINE L1 2316 3203 -3223 845 292 102 21 chr17 18761172 18761556 -70742997 + MER57B LTR ERV1 10 424 -10 253 385 32 5 chr17 18764472 18764659 -70739894 - ERVL LTR ERVL -785 2771 2580 1136 77 0 30 chr17 18765076 18765244 -70739309 + L1PB1 LINE L1 5982 6144 -7 25 51 0 0 chr17 18765530 18765569 -70738984 + AT_rich Low_complexity Low_complexity 1 39 0 334 297 88 37 chr17 18766248 18766544 -70738009 - ERVL LTR ERVL -3726 1959 1649 596 260 52 34 chr17 18766975 18767244 -70737309 + L1MCa LINE L1 4170 4443 -1983 880 230 10 0 chr17 18767260 18767464 -70737089 + L1PB4 LINE L1 4874 5079 -1067 2739 179 47 16 chr17 18767464 18768075 -70736478 + L1PB4 LINE L1 5514 6156 0 417 274 72 20 chr17 18769472 18769625 -70734928 - L1M4 LINE L1 -1775 4371 4211 205 241 0 0 chr17 18769625 18769679 -70734874 + (CTTA)n Simple_repeat Simple_repeat 1 54 0 824 300 51 19 chr17 18769789 18770432 -70734121 - L1M4 LINE L1 -2061 4085 3422 2307 116 0 0 chr17 18770434 18770744 -70733809 - AluSg SINE Alu 0 310 1 996 85 0 8 chr17 18770744 18770873 -70733680 - AluSq/x SINE Alu -184 128 1 345 282 91 39 chr17 18770875 18771088 -70733465 - L1M4 LINE L1 -2721 3425 3225 2490 64 0 3 chr17 18771088 18771383 -70733170 - AluY SINE Alu -17 294 1 345 282 91 39 chr17 18771383 18771609 -70732944 - L1M4 LINE L1 -2921 3225 2963 1559 298 114 80 chr17 18773198 18773602 -70730951 - L1M4 LINE L1 -1719 4427 4039 2325 103 3 0 chr17 18773602 18773902 -70730651 - AluSq SINE Alu -12 301 1 2432 97 3 0 chr17 18773912 18774223 -70730330 - AluSp SINE Alu -1 312 1 1559 298 114 80 chr17 18774223 18774488 -70730065 - L1M4 LINE L1 -2115 4031 3777 2230 80 3 21 chr17 18774488 18774811 -70729742 - AluY SINE Alu 0 318 1 1559 298 114 80 chr17 18774811 18775535 -70729018 - L1M4 LINE L1 -2369 3777 2972 1188 241 30 73 chr17 18776114 18776702 -70727851 - L1MC/D LINE L1 -746 5400 5219 * 8566 102 6 5 chr17 18776688 18778514 -70726039 + L1PA8A LINE L1 4052 5873 -258 2443 103 0 0 chr17 18778587 18778899 -70725654 + AluSx SINE Alu 1 312 0 596 253 130 0 chr17 18778922 18779183 -70725370 - L1M4 LINE L1 -841 5305 5011 876 122 0 0 chr17 18779515 18779638 -70724915 + FRAM SINE Alu 46 168 -8 360 0 0 0 chr17 18780140 18780180 -70724373 + (TG)n Simple_repeat Simple_repeat 1 40 0 5293 155 29 10 chr17 18780547 18781657 -70722896 - L1PA16 LINE L1 -21 6145 4991 2205 84 0 0 chr17 18781657 18781930 -70722623 - AluY SINE Alu -2 309 37 5293 155 29 10 chr17 18781930 18782457 -70722096 - L1PA16 LINE L1 -1175 4991 4475 591 277 83 22 chr17 18782471 18782749 -70721804 - L2 LINE L2 0 3313 3019 262 244 148 0 chr17 18783471 18783586 -70720967 + MLT1E2 LTR MaLR 226 357 -269 294 106 0 0 chr17 18784485 18784532 -70720021 + (TG)n Simple_repeat Simple_repeat 1 47 0 3611 133 33 18 chr17 18784570 18785200 -70719353 + MER51C LTR ERV1 1 640 0 325 380 63 11 chr17 18785395 18785666 -70718887 - L1ME LINE L1 -531 5639 5355 639 297 12 40 chr17 18785924 18786173 -70718380 - MIR SINE MIR -14 248 7 386 278 31 52 chr17 18786179 18786370 -70718183 - L2 LINE L2 -169 3103 2917 421 135 48 127 chr17 18787110 18787186 -70717367 - MER103 DNA DNA -47 119 55 2476 84 7 0 chr17 18787186 18787495 -70717058 - AluSq SINE Alu -2 311 1 421 135 48 127 chr17 18787495 18787544 -70717009 - MER103 DNA DNA -111 55 4 2138 175 50 19 chr17 18788275 18788738 -70715815 - L1MB7 LINE L1 -10 6174 5698 1104 157 6 0 chr17 18788738 18788897 -70715656 + AluSx SINE Alu 1 160 -152 1042 132 13 0 chr17 18788898 18789050 -70715503 - AluJb SINE Alu -148 164 11 3278 227 41 18 chr17 18789059 18789743 -70714810 + L1M4 LINE L1 3995 4707 -1439 1481 174 15 67 chr17 18789743 18790071 -70714482 + AluJo SINE Alu 1 311 -1 3278 227 41 18 chr17 18790071 18790290 -70714263 + L1M4 LINE L1 4707 4919 -1227 2167 108 0 3 chr17 18790302 18790588 -70713965 + AluSq SINE Alu 22 306 -7 1171 177 0 5 chr17 18790636 18790834 -70713719 + AluJo SINE Alu 98 294 -18 481 275 8 8 chr17 18791032 18791163 -70713390 - MIR SINE MIR -58 150 20 522 181 7 81 chr17 18791826 18791975 -70712578 - MER20 DNA MER1_type -52 167 30 1684 137 3 129 chr17 18792233 18792590 -70711963 - AluJo SINE Alu 0 312 1 388 224 18 109 chr17 18792592 18792636 -70711917 + L1MD3 LINE L1 7846 7892 -103 1637 71 0 0 chr17 18792636 18792833 -70711720 - AluY SINE Alu -12 299 103 388 224 18 109 chr17 18792833 18792953 -70711600 + L1MD3 LINE L1 7892 7995 0 667 281 135 16 chr17 18793321 18793817 -70710736 - L2 LINE L2 -210 3103 2544 1020 77 23 0 chr17 18793930 18794060 -70710493 + AluSq/x SINE Alu 1 133 -180 2490 68 0 7 chr17 18794079 18794375 -70710178 + AluY SINE Alu 2 295 -16 458 92 0 0 chr17 18794892 18794957 -70709596 - AluSx SINE Alu -13 299 235 1087 155 39 11 chr17 18794957 18795138 -70709415 - AluSx SINE Alu -126 186 1 421 279 130 0 chr17 18795517 18795678 -70708875 - MER5A DNA MER1_type -2 187 6 2701 74 11 3 chr17 18796800 18797177 -70707376 + MER41A LTR ERV1 1 380 -174 531 62 38 12 chr17 18797182 18797262 -70707291 + MER4B LTR ERV1 171 252 -358 * 1314 110 5 5 chr17 18797261 18797461 -70707092 + MER4E LTR ERV1 567 766 0 2163 146 6 0 chr17 18797461 18797811 -70706742 - MER41B LTR ERV1 -283 352 1 21 36 0 0 chr17 18797951 18797979 -70706574 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr17 18798843 18798864 -70705689 + (GCTG)n Simple_repeat Simple_repeat 4 24 0 186 143 0 0 chr17 18800418 18800453 -70704100 + (GGA)n Simple_repeat Simple_repeat 2 36 0 2193 122 0 0 chr17 18804738 18805034 -70699519 - AluSq SINE Alu -17 296 1 301 292 88 50 chr17 18808816 18809049 -70695504 + MIR SINE MIR 3 241 -21 242 356 37 55 chr17 18809702 18809865 -70694688 + MIR SINE MIR 84 243 -19 326 210 4 21 chr17 18810715 18810914 -70693639 + HSAT5 Satellite Satellite 1 195 -1 279 248 119 28 chr17 18811554 18811663 -70692890 + L1MEc LINE L1 1939 2057 -4339 213 65 0 0 chr17 18811670 18811701 -70692852 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 321 118 0 0 chr17 18811700 18811751 -70692802 + (TA)n Simple_repeat Simple_repeat 2 52 0 1369 211 11 18 chr17 18811758 18812042 -70692511 - AluJo SINE Alu -30 282 1 920 239 8 51 chr17 18812097 18812331 -70692222 + MER58A DNA MER1_type 1 224 0 424 301 98 0 chr17 18812333 18812486 -70692067 - L2 LINE L2 -653 2661 2494 1643 167 34 78 chr17 18813046 18813454 -70691099 + MLT1B LTR MaLR 1 390 0 582 209 0 0 chr17 18813824 18813958 -70690595 + (CA)n Simple_repeat Simple_repeat 2 135 0 720 204 10 3 chr17 18814455 18814754 -70689799 + CT-rich Low_complexity Low_complexity 1 301 0 2059 184 6 3 chr17 18816128 18816471 -70688082 + MER2 DNA MER2_type 1 344 0 2383 212 55 9 chr17 18816830 18817411 -70687142 - L1MB7 LINE L1 -18 6166 5559 236 301 133 0 chr17 18817595 18817708 -70686845 - MIR3 SINE MIR -11 197 70 359 211 92 14 chr17 18818418 18818560 -70685993 + MLT1C LTR MaLR 112 264 -203 405 289 37 0 chr17 18819141 18819276 -70685277 + LTR52 LTR ERVL 279 418 -3 184 283 101 30 chr17 18819319 18819418 -70685135 + L2 LINE L2 2871 2976 -296 358 310 177 0 chr17 18819487 18819645 -70684908 - MIR SINE MIR -61 201 16 313 317 50 25 chr17 18820538 18820658 -70683895 + MIR SINE MIR 21 143 -119 530 244 81 53 chr17 18820939 18821185 -70683368 + MLT1H LTR MaLR 79 331 -218 312 337 59 64 chr17 18821625 18821699 -70682854 - L1MCa LINE L1 -3993 2433 2360 1917 167 0 0 chr17 18821699 18822005 -70682548 - AluSx SINE Alu 0 312 7 312 337 59 64 chr17 18822005 18822117 -70682436 - L1MCa LINE L1 -4066 2360 2248 772 213 22 44 chr17 18822121 18822316 -70682237 + L1PA16 LINE L1 3522 3713 -2433 5198 194 18 14 chr17 18822316 18823494 -70681059 + L1PA16 LINE L1 4981 6165 -1 772 213 22 44 chr17 18823494 18823524 -70681029 + L1PA16 LINE L1 3713 3742 -2404 560 255 32 0 chr17 18824249 18824437 -70680116 - L1M4 LINE L1 -3113 3033 2840 2272 93 0 10 chr17 18824816 18825118 -70679435 - AluSq SINE Alu -14 299 1 188 57 0 57 chr17 18825221 18825256 -70679297 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 648 243 153 27 chr17 18825299 18825521 -70679032 + MIR SINE MIR 1 250 -12 303 230 18 97 chr17 18826239 18826352 -70678201 + MIR SINE MIR 12 115 -147 450 245 141 27 chr17 18826361 18826545 -70678008 - L2 LINE L2 -11 3302 3098 489 65 0 0 chr17 18826735 18826797 -70677756 + Alu SINE Alu 1 62 -256 2623 45 0 0 chr17 18877169 18877477 -70627076 + AluY SINE Alu 1 308 -3 1045 190 146 13 chr17 18877824 18878140 -70626413 - L1MB7 LINE L1 0 6184 5827 2463 192 94 16 chr17 18878350 18878964 -70625589 + L1MB7 LINE L1 5523 6184 0 1982 96 0 119 chr17 18878973 18879326 -70625227 + AluSx SINE Alu 1 311 -1 2214 110 0 7 chr17 18879617 18879918 -70624635 + AluSg SINE Alu 1 299 -11 1443 156 118 15 chr17 18880316 18880473 -70624080 - AluJo SINE Alu -21 291 152 1782 188 0 3 chr17 18880473 18880771 -70623782 - AluJb SINE Alu -15 297 1 1443 156 118 15 chr17 18880771 18880876 -70623677 - AluJo SINE Alu -160 152 2 481 241 35 0 chr17 18880925 18881041 -70623512 + MER3 DNA MER1_type 1 120 -89 307 91 0 0 chr17 18881197 18881241 -70623312 - MIR SINE MIR -61 147 104 279 240 120 0 chr17 18881412 18881512 -70623041 + Charlie7 DNA MER1_type 1 112 -2500 4806 232 71 22 chr17 18884896 18885562 -70618991 + L1MC3 LINE L1 6281 6913 -872 2354 156 26 21 chr17 18885562 18885992 -70618561 + MSTB1 LTR MaLR 1 432 0 4806 232 71 22 chr17 18885992 18886757 -70617796 + L1MC3 LINE L1 6913 7783 -2 225 0 0 0 chr17 18886841 18886866 -70617687 + (A)n Simple_repeat Simple_repeat 1 25 0 243 390 24 0 chr17 18887807 18887930 -70616623 - L3 LINE CR1 -201 1376 1251 645 81 61 0 chr17 18888936 18889035 -70615518 - L1MB3 LINE L1 -199 5984 5880 2351 189 80 37 chr17 18889135 18889597 -70614956 - L1MB3 LINE L1 -295 5885 5444 1572 142 24 45 chr17 18889597 18889885 -70614668 - AluJo SINE Alu -1 311 30 2351 189 80 37 chr17 18889885 18890315 -70614238 - L1MB3 LINE L1 -736 5444 4969 513 230 7 7 chr17 18891276 18891415 -70613138 - L1MB7 LINE L1 -55 6129 5991 30 59 0 0 chr17 18891761 18891812 -70612741 + AT_rich Low_complexity Low_complexity 1 51 0 2162 171 44 26 chr17 18893040 18893537 -70611016 - L1MB5 LINE L1 -124 6050 5545 377 262 58 0 chr17 18893547 18893650 -70610903 - MIR SINE MIR -107 155 47 250 333 174 0 chr17 18895236 18895374 -70609179 + MIR SINE MIR 96 257 -5 193 321 71 9 chr17 18895763 18895875 -70608678 + MIR3 SINE MIR 87 205 -3 288 326 11 21 chr17 18896741 18896836 -70607717 + MIR SINE MIR 9 102 -160 1086 230 20 8 chr17 18896836 18897084 -70607469 - Tigger3(Golem) DNA MER2_type -1 3028 2778 317 358 32 0 chr17 18897124 18897247 -70607306 + MIR SINE MIR 102 228 -34 4642 105 24 6 chr17 18897379 18898053 -70606500 - L1PA13 LINE L1 0 6163 5478 2473 74 0 0 chr17 18898065 18898374 -70606179 - AluY SINE Alu -2 309 1 260 244 0 8 chr17 18901110 18901240 -70603313 + CT-rich Low_complexity Low_complexity 1 128 0 275 324 88 15 chr17 18901662 18901798 -70602755 - MIR3 SINE MIR -45 163 18 187 387 28 9 chr17 18903081 18903187 -70601366 + MIR SINE MIR 84 191 -71 221 325 0 0 chr17 18906144 18906224 -70598329 + (TG)n Simple_repeat Simple_repeat 1 80 0 1940 156 99 3 chr17 18906246 18906579 -70597974 - MLT1A1 LTR MaLR 0 365 1 315 0 0 0 chr17 18907028 18907063 -70597490 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1771 132 0 0 chr17 18908012 18908255 -70596298 + AluSx SINE Alu 1 243 -69 294 308 79 26 chr17 18910437 18910643 -70593910 - MIR SINE MIR -21 241 24 212 267 67 13 chr17 18913976 18914051 -70590502 + MIR SINE MIR 40 118 -90 2368 68 0 0 chr17 18915175 18915468 -70589085 + AluSc SINE Alu 1 293 -16 335 333 56 28 chr17 18918538 18918718 -70585835 + L1ME LINE L1 5592 5776 -345 397 227 52 10 chr17 18918877 18918974 -70585579 + Charlie1 DNA MER1_type 14 114 -2647 3379 202 128 60 chr17 18918978 18919813 -70584740 + Charlie1 DNA MER1_type 1425 2375 -386 2230 99 3 0 chr17 18919813 18920106 -70584447 + AluSx SINE Alu 3 296 -16 3379 202 128 60 chr17 18920106 18920522 -70584031 + Charlie1 DNA MER1_type 2375 2761 0 198 0 0 0 chr17 18921297 18921319 -70583234 + (A)n Simple_repeat Simple_repeat 1 22 0 563 270 144 43 chr17 18921381 18921446 -70583107 - MER77 LTR ERV1 -5 600 543 1546 190 60 3 chr17 18921446 18921609 -70582944 - AluJo SINE Alu -12 300 113 348 24 0 0 chr17 18921609 18921650 -70582903 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1546 190 60 3 chr17 18921650 18921770 -70582783 - AluJo SINE Alu -199 113 1 563 270 144 43 chr17 18921770 18922077 -70582476 - MER77 LTR ERV1 -62 543 303 419 253 27 47 chr17 18922235 18922385 -70582168 - MER77 LTR ERV1 -405 200 54 200 246 188 0 chr17 18924263 18924332 -70580221 + L2 LINE L2 2565 2646 -668 2092 114 31 0 chr17 18925804 18926094 -70578459 - AluSx SINE Alu -13 299 1 2265 81 24 0 chr17 18928103 18928398 -70576155 + AluSp SINE Alu 1 302 -11 199 217 22 0 chr17 18929640 18929686 -70574867 - L2 LINE L2 -90 3182 3136 256 269 67 10 chr17 18930417 18930521 -70574032 - Tigger8 DNA MER2_type -325 341 232 2246 95 3 0 chr17 18930630 18930925 -70573628 + AluSc SINE Alu 1 296 -13 286 303 18 18 chr17 18932255 18932364 -70572189 - MIR SINE MIR -105 157 49 212 319 195 26 chr17 18932534 18932647 -70571906 - L2 LINE L2 -31 3282 3151 248 371 93 7 chr17 18932699 18932850 -70571703 + MIR3 SINE MIR 22 185 -23 1247 126 135 0 chr17 18933241 18933448 -70571105 + MER46A DNA MER2_type 2 236 0 741 126 0 0 chr17 18940626 18940729 -70563824 + U6 snRNA snRNA 1 103 -4 33 0 0 0 chr17 18940729 18940762 -70563791 + AT_rich Low_complexity Low_complexity 1 33 0 1713 78 5 0 chr17 18945100 18945318 -70559235 + AluY SINE Alu 3 221 -90 238 71 0 0 chr17 18945318 18945360 -70559193 + AluY SINE Alu 256 297 -2 1914 138 20 7 chr17 18948469 18948766 -70555787 - AluJb SINE Alu -11 301 1 1661 161 3 47 chr17 18948970 18949177 -70555376 + 7SLRNA srpRNA srpRNA 24 216 -104 1885 157 3 13 chr17 18949177 18949483 -70555070 + AluJb SINE Alu 1 303 -9 1661 161 3 47 chr17 18949483 18949573 -70554980 + 7SLRNA srpRNA srpRNA 216 308 -12 1057 75 0 0 chr17 18949577 18949710 -70554843 + AluSg SINE Alu 1 133 -177 2084 87 4 11 chr17 18949710 18949987 -70554566 + AluSg SINE Alu 1 275 -35 2455 40 0 3 chr17 18953744 18954041 -70550512 - AluY SINE Alu -15 296 1 219 69 0 0 chr17 18955266 18955295 -70549258 + (TCCGG)n Simple_repeat Simple_repeat 5 33 0 183 205 0 0 chr17 18955504 18955543 -70549010 + (TTA)n Simple_repeat Simple_repeat 1 39 0 240 122 0 0 chr17 18956099 18956140 -70548413 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 184 284 114 34 chr17 18956772 18956860 -70547693 - L2 LINE L2 -1847 1467 1373 892 141 0 0 chr17 18957119 18957247 -70547306 + AluJb SINE Alu 158 285 -27 252 309 122 6 chr17 18960017 18960198 -70544355 + L1MC5 LINE L1 7268 7469 -492 1724 94 0 0 chr17 18960434 18960647 -70543906 + AluSq SINE Alu 1 213 -100 2381 102 3 0 chr17 18961468 18961772 -70542781 - AluSx SINE Alu -7 305 1 299 297 129 0 chr17 18961784 18961939 -70542614 + MLT1I LTR MaLR 228 402 -7 2159 122 3 10 chr17 18962905 18963216 -70541337 - AluSx SINE Alu -3 309 1 1695 174 29 29 chr17 18963683 18963813 -70540740 + AluJo SINE Alu 1 130 -182 2050 132 7 7 chr17 18963813 18964108 -70540445 + AluSg SINE Alu 5 299 -11 1695 174 29 29 chr17 18964108 18964288 -70540265 + AluJo SINE Alu 129 311 -1 349 317 43 12 chr17 18964908 18965072 -70539481 - MIR SINE MIR -5 257 89 2153 104 11 0 chr17 18965810 18966118 -70538435 + AluSq SINE Alu 1 311 0 312 357 61 8 chr17 18967175 18967438 -70537115 - L2 LINE L2 -459 2855 2579 880 224 24 9 chr17 18967724 18967934 -70536619 + L1MB3 LINE L1 5795 6007 -176 584 203 0 8 chr17 18967937 18968060 -70536493 + L1MB3 LINE L1 6054 6175 -8 241 172 86 0 chr17 18968542 18968600 -70535953 - MER3 DNA MER1_type -3 206 144 2016 119 4 0 chr17 18968644 18968913 -70535640 + AluSx SINE Alu 21 290 -22 203 61 30 0 chr17 18968916 18968949 -70535604 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1146 195 0 108 chr17 18968955 18969288 -70535265 + AluJb SINE Alu 2 298 -4 2138 119 7 10 chr17 18969290 18969584 -70534969 + AluSx SINE Alu 1 293 -19 935 123 0 36 chr17 18971552 18971690 -70532863 + AluJo SINE Alu 7 139 -173 2472 76 0 7 chr17 18971691 18971995 -70532558 + AluY SINE Alu 1 302 -9 2412 113 3 0 chr17 18972083 18972394 -70532159 - AluSq SINE Alu -1 312 1 2224 124 0 9 chr17 18972571 18972886 -70531667 - AluSx SINE Alu 0 312 1 1335 132 5 0 chr17 18972934 18973123 -70531430 + AluSx SINE Alu 2 191 -121 608 51 0 0 chr17 18973123 18973201 -70531352 + AluSg SINE Alu 57 134 -176 2436 70 7 3 chr17 18973201 18973501 -70531052 + AluY SINE Alu 1 301 -10 1350 156 3 122 chr17 18973501 18973848 -70530705 + AluJb SINE Alu 1 310 0 2321 57 3 27 chr17 18976194 18976494 -70528059 - AluSq SINE Alu -20 293 1 2300 71 7 17 chr17 18976808 18977105 -70527448 + AluSc SINE Alu 1 294 -15 631 60 0 0 chr17 18977321 18977426 -70527127 - AluSg/x SINE Alu 0 300 196 2202 90 38 0 chr17 18978656 18978945 -70525608 - AluSg SINE Alu -10 300 1 2250 85 54 0 chr17 18978962 18979257 -70525296 - AluY SINE Alu 0 311 1 2024 127 0 14 chr17 18979845 18980162 -70524391 - AluY SINE Alu 0 313 1 1129 139 57 53 chr17 18980162 18980371 -70524182 + THE1B LTR MaLR 155 364 0 2509 70 0 3 chr17 18981311 18981609 -70522944 + AluY SINE Alu 1 297 -14 377 252 30 23 chr17 18982270 18982289 -70522264 - LTR50 LTR ERVL -124 671 654 1952 138 10 3 chr17 18982289 18982580 -70521973 + AluSx SINE Alu 1 293 -19 377 252 30 23 chr17 18982580 18982691 -70521862 - LTR50 LTR ERVL -141 654 540 251 227 76 0 chr17 18982879 18982945 -70521608 - LTR50 LTR ERVL -700 95 25 255 237 0 140 chr17 18983383 18983430 -70521123 + MER58A DNA MER1_type 5 34 -307 2444 92 7 0 chr17 18983430 18983734 -70520819 - AluSq SINE Alu -7 306 1 255 237 0 140 chr17 18983734 18983779 -70520774 + MER58A DNA MER1_type 34 84 -140 2147 116 13 3 chr17 18983855 18984157 -70520396 - AluSq SINE Alu -8 305 1 1158 170 50 9 chr17 18984519 18984737 -70519816 + AluJb SINE Alu 78 304 -8 22 0 0 0 chr17 18984793 18984815 -70519738 + AT_rich Low_complexity Low_complexity 1 22 0 703 115 31 46 chr17 18984842 18984972 -70519581 - FLAM_C SINE Alu -2 131 4 691 224 152 19 chr17 18985999 18986263 -70518290 - MER46C DNA MER2_type -1 337 39 2134 114 3 14 chr17 18986670 18986967 -70517586 - AluSx SINE Alu -18 294 1 644 182 16 0 chr17 18986996 18987117 -70517436 - AluSg/x SINE Alu -1 311 189 319 305 38 19 chr17 18987534 18987625 -70516928 - L2 LINE L2 -14 3299 3211 1548 131 40 44 chr17 18987625 18987667 -70516886 - L1MB5 LINE L1 0 6174 6133 243 0 0 0 chr17 18987667 18987694 -70516859 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2091 113 7 14 chr17 18987694 18987841 -70516712 - AluSx SINE Alu -30 282 136 2386 100 3 0 chr17 18987841 18988142 -70516411 - AluSp SINE Alu -11 302 1 2091 113 7 14 chr17 18988142 18988278 -70516275 - AluSx SINE Alu -176 136 1 1548 131 40 44 chr17 18988278 18988555 -70515998 - L1MB5 LINE L1 -39 6135 5855 319 305 38 19 chr17 18988555 18988568 -70515985 - L2 LINE L2 -102 3211 3193 1522 124 0 5 chr17 18988605 18988822 -70515731 - AluSg/x SINE Alu -12 300 85 1007 226 107 76 chr17 18989282 18989342 -70515211 + L1ME3A LINE L1 5700 5757 -413 2329 96 0 13 chr17 18989342 18989644 -70514909 - AluY SINE Alu -13 298 1 2217 98 24 10 chr17 18989646 18989941 -70514612 - AluSq SINE Alu -14 299 1 1007 226 107 76 chr17 18989941 18990154 -70514399 + L1ME3A LINE L1 5757 5998 -172 2380 51 58 0 chr17 18990154 18990430 -70514123 + AluY SINE Alu 1 292 -19 1007 226 107 76 chr17 18990430 18990599 -70513954 + L1ME3A LINE L1 5998 6160 -10 298 208 14 0 chr17 18990646 18990718 -70513835 - MER20 DNA MER1_type -1 218 146 921 179 45 6 chr17 18990782 18990961 -70513592 - MER20 DNA MER1_type -33 186 1 1621 194 0 14 chr17 18991290 18991574 -70512979 + AluJo SINE Alu 1 280 -32 216 0 0 0 chr17 18991574 18991598 -70512955 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 1075 131 0 0 chr17 18992213 18992366 -70512187 + AluSg/x SINE Alu 153 305 -5 1732 169 20 17 chr17 18992375 18992671 -70511882 + AluJb SINE Alu 1 297 -15 2416 91 7 3 chr17 18992880 18993189 -70511364 + AluSg SINE Alu 1 310 0 2259 117 3 7 chr17 18993371 18993680 -70510873 + AluSc SINE Alu 1 308 -1 1226 114 0 45 chr17 18993680 18993856 -70510697 + AluSg/x SINE Alu 132 299 -11 1957 145 3 0 chr17 18993918 18994250 -70510303 + AluSx SINE Alu 1 333 0 2382 86 0 32 chr17 18994256 18994570 -70509983 + AluY SINE Alu 1 304 -7 22 0 0 0 chr17 18994612 18994634 -70509919 + AT_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr17 18994697 18994739 -70509814 + AT_rich Low_complexity Low_complexity 1 42 0 1529 184 57 21 chr17 18994977 18995259 -70509294 - AluJo SINE Alu -20 292 1 271 220 0 0 chr17 18995399 18995449 -70509104 + AluJo SINE Alu 85 134 -168 2332 115 0 0 chr17 18995450 18995754 -70508799 + AluSx SINE Alu 1 304 -8 2718 51 0 0 chr17 18995884 18996195 -70508358 + AluY SINE Alu 1 311 0 227 207 35 17 chr17 18996574 18996632 -70507921 + MLT1J LTR MaLR 341 399 -112 1291 117 0 0 chr17 18996677 18996840 -70507713 - AluSg/x SINE Alu -22 288 126 1917 163 3 0 chr17 18997981 18998282 -70506271 + AluJb SINE Alu 1 302 -10 2258 115 6 6 chr17 18998891 18999203 -70505350 + AluSp SINE Alu 1 312 -1 2268 103 0 10 chr17 18999614 18999951 -70504602 + AluSc SINE Alu 1 309 0 769 165 0 0 chr17 18999951 19000084 -70504469 + FLAM_C SINE Alu 1 133 0 1658 148 0 123 chr17 19000626 19000821 -70503732 - AluJo SINE Alu -4 308 173 2490 65 0 3 chr17 19000821 19001114 -70503439 + AluY SINE Alu 1 292 -19 1658 148 0 123 chr17 19001114 19001269 -70503284 - AluJo SINE Alu -139 173 1 1943 117 26 39 chr17 19001271 19001380 -70503173 - AluSq SINE Alu -10 303 194 2490 75 0 0 chr17 19001380 19001674 -70502879 + AluY SINE Alu 1 294 -17 1943 117 26 39 chr17 19001674 19001871 -70502682 - AluSq SINE Alu -119 194 1 2586 76 0 0 chr17 19001878 19002182 -70502371 - AluSp SINE Alu -7 306 3 218 336 44 26 chr17 19002848 19002961 -70501592 - MIR3 SINE MIR -43 165 51 942 175 113 5 chr17 19003505 19003699 -70500854 - MER46A DNA MER2_type -8 228 14 2321 102 3 0 chr17 19003774 19004068 -70500485 - AluSx SINE Alu -15 297 3 2251 102 0 3 chr17 19004493 19004803 -70499750 + AluSc SINE Alu 2 310 0 1950 157 0 22 chr17 19004996 19005135 -70499418 + AluSx SINE Alu 1 142 -170 2103 94 0 0 chr17 19005135 19005400 -70499153 + AluSx SINE Alu 40 304 -8 1950 157 0 22 chr17 19005400 19005572 -70498981 + AluSx SINE Alu 142 305 -7 840 236 50 117 chr17 19005603 19005828 -70498725 + L1MC4 LINE L1 7573 7747 -295 2187 95 7 7 chr17 19005828 19006122 -70498431 + AluSx SINE Alu 1 294 -18 840 236 50 117 chr17 19006122 19006400 -70498153 + L1MC4 LINE L1 7747 8042 0 1921 150 17 10 chr17 19007101 19007401 -70497152 + AluJo SINE Alu 1 302 -10 2006 85 27 30 chr17 19007490 19007785 -70496768 + AluSp SINE Alu 1 294 -19 314 155 60 0 chr17 19007787 19007903 -70496650 + (TA)n Simple_repeat Simple_repeat 1 123 0 902 121 0 57 chr17 19007957 19008098 -70496455 + AluSg SINE Alu 1 133 -177 2247 106 3 0 chr17 19008098 19008390 -70496163 + AluSx SINE Alu 1 293 -19 1696 204 21 0 chr17 19008583 19008872 -70495681 + AluJo SINE Alu 1 295 -17 1882 77 0 49 chr17 19009637 19009776 -70494777 - AluSq SINE Alu -40 273 154 2063 78 39 0 chr17 19009776 19010060 -70494493 - AluSx SINE Alu -17 295 1 1882 77 0 49 chr17 19010060 19010207 -70494346 - AluSq SINE Alu -159 154 1 413 256 120 8 chr17 19010344 19010477 -70494076 + MIR SINE MIR 104 251 -11 199 282 14 28 chr17 19010521 19010592 -70493961 + MIR SINE MIR 81 150 -58 2343 81 3 0 chr17 19011016 19011323 -70493230 + AluSx SINE Alu 1 308 -4 1891 119 0 56 chr17 19012024 19012326 -70492227 - AluSx SINE Alu -15 297 13 609 136 0 0 chr17 19012328 19012416 -70492137 - AluS SINE Alu -224 88 1 1956 128 3 10 chr17 19012470 19012774 -70491779 + AluJo SINE Alu 1 302 -10 208 357 141 17 chr17 19013068 19013363 -70491190 - L2 LINE L2 -359 2955 2606 1705 109 4 16 chr17 19013363 19013619 -70490934 + AluSg SINE Alu 44 296 -14 208 357 141 17 chr17 19013619 19013684 -70490869 - L2 LINE L2 -708 2606 2550 1334 145 0 23 chr17 19013872 19014093 -70490460 - AluSg/x SINE Alu -15 297 82 1260 55 109 11 chr17 19014093 19014276 -70490277 - AluY SINE Alu -17 294 94 2009 109 3 23 chr17 19016062 19016386 -70488167 + AluSx SINE Alu 2 312 0 521 244 87 23 chr17 19018184 19018356 -70486197 + MER53 DNA DNA 3 185 -4 21 0 0 0 chr17 19020554 19020575 -70483978 + GC_rich Low_complexity Low_complexity 1 21 0 333 158 33 87 chr17 19020782 19020966 -70483587 + (CACGT)n Simple_repeat Simple_repeat 4 177 0 1028 186 48 8 chr17 19021681 19021929 -70482624 + L1MD3 LINE L1 7736 7993 -2 * 1036 218 128 26 chr17 19021917 19022125 -70482428 + L1ME1 LINE L1 5585 5770 -396 1596 165 7 45 chr17 19022125 19022434 -70482119 + AluSx SINE Alu 1 297 -15 1036 218 128 26 chr17 19022434 19022674 -70481879 + L1ME1 LINE L1 5770 6098 -68 261 230 156 22 chr17 19022589 19022724 -70481829 + L1MA10 LINE L1 6168 6320 -14 * 2272 78 0 0 chr17 19022725 19023021 -70481532 - AluSg1 SINE Alu -13 296 1 2124 99 3 20 chr17 19023021 19023324 -70481229 - AluY SINE Alu -12 299 2 329 235 34 67 chr17 19023348 19023467 -70481086 + MIR3 SINE MIR 42 156 -52 990 117 7 0 chr17 19023646 19023791 -70480762 - L1MA3 LINE L1 0 6305 6160 237 83 0 0 chr17 19023792 19023828 -70480725 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2195 67 0 11 chr17 19023828 19024112 -70480441 - AluY SINE Alu -30 281 1 2012 104 45 0 chr17 19024115 19024404 -70480149 - AluSx SINE Alu -10 302 1 2031 110 3 10 chr17 19024405 19024713 -70479840 - AluSq SINE Alu -7 306 1 245 182 23 57 chr17 19024714 19024802 -70479751 + L1MA9 LINE L1 6209 6293 -19 1537 75 5 28 chr17 19024845 19025057 -70479496 - AluJb SINE Alu -105 207 1 2014 102 13 13 chr17 19025349 19025652 -70478901 + AluSg SINE Alu 1 303 -7 1461 219 0 0 chr17 19026246 19026543 -70478010 - AluY SINE Alu -14 297 1 2271 92 0 3 chr17 19028026 19028330 -70476223 - AluY SINE Alu -8 303 1 1951 93 36 4 chr17 19031622 19031902 -70472651 - AluY SINE Alu -22 289 1 1726 177 3 0 chr17 19031902 19032196 -70472357 - AluJo SINE Alu -3 309 15 2023 103 45 3 chr17 19032238 19032407 -70472146 - AluSx SINE Alu -9 303 116 243 0 0 0 chr17 19032407 19032434 -70472119 + (TG)n Simple_repeat Simple_repeat 2 28 0 2023 103 45 3 chr17 19032434 19032555 -70471998 - AluSx SINE Alu -196 116 1 262 269 125 0 chr17 19032642 19032746 -70471807 + Charlie2 DNA MER1_type 237 353 -2509 236 252 204 14 chr17 19032819 19032966 -70471587 + MER112 DNA MER1_type 38 212 -48 1980 138 0 3 chr17 19032992 19033290 -70471263 + AluSx SINE Alu 1 297 -15 1146 226 0 25 chr17 19033290 19033564 -70470989 + L1M4 LINE L1 4766 5032 -1114 623 126 0 21 chr17 19033580 19033675 -70470878 + AluS SINE Alu 5 97 -215 2016 104 17 0 chr17 19033997 19034285 -70470268 + AluSq SINE Alu 1 293 -20 2265 100 6 0 chr17 19035814 19036125 -70468428 + AluSq SINE Alu 1 313 0 390 270 61 17 chr17 19037058 19037173 -70467380 - MIR SINE MIR -50 212 93 297 242 44 81 chr17 19039191 19039340 -70465213 - L1MC4 LINE L1 -207 7675 7458 2004 86 16 23 chr17 19039910 19040213 -70464340 - AluSg SINE Alu -9 301 1 1914 82 0 32 chr17 19041098 19041377 -70463176 - AluSg SINE Alu 0 310 41 709 186 0 131 chr17 19041379 19041600 -70462953 - L1PA16 LINE L1 -11 6155 5964 1640 148 7 11 chr17 19041600 19041883 -70462670 - AluJo SINE Alu -18 294 13 267 286 57 29 chr17 19041883 19041988 -70462565 - MIR SINE MIR -33 229 122 248 311 114 21 chr17 19043192 19043385 -70461168 + L1MC5 LINE L1 7259 7469 -492 1453 100 0 19 chr17 19043629 19043839 -70460714 + AluSq SINE Alu 5 210 -103 2145 101 3 10 chr17 19044667 19044974 -70459579 - AluSx SINE Alu -7 305 1 320 297 128 0 chr17 19044987 19045135 -70459418 + MLT1I LTR MaLR 228 394 -15 1848 130 0 43 chr17 19046123 19046446 -70458107 - AluSx SINE Alu -3 309 1 1483 171 29 41 chr17 19046919 19047052 -70457501 + AluJo SINE Alu 1 134 -178 1666 151 0 33 chr17 19047052 19047357 -70457196 + AluSg SINE Alu 5 299 -11 1483 171 29 41 chr17 19047357 19047538 -70457015 + AluJo SINE Alu 134 311 -1 379 329 37 6 chr17 19048160 19048324 -70456229 - MIR SINE MIR -5 257 89 1899 100 11 7 chr17 19049093 19049394 -70455159 + AluSq SINE Alu 11 312 0 364 347 57 11 chr17 19050466 19050731 -70453822 - L2 LINE L2 -459 2855 2579 928 221 14 14 chr17 19051021 19051234 -70453319 + L1MB3 LINE L1 5795 6007 -176 660 203 0 8 chr17 19051237 19051360 -70453193 + L1MB3 LINE L1 6054 6175 -8 239 172 86 0 chr17 19051846 19051904 -70452649 - MER3 DNA MER1_type -3 206 144 1965 128 3 0 chr17 19051948 19052238 -70452315 + AluSx SINE Alu 21 311 -1 1235 195 0 111 chr17 19052260 19052594 -70451959 + AluJb SINE Alu 2 298 -4 1942 121 7 17 chr17 19052596 19052893 -70451660 + AluSx SINE Alu 1 294 -18 21 0 0 0 chr17 19052895 19052916 -70451637 + AT_rich Low_complexity Low_complexity 1 21 0 1089 177 4 65 chr17 19054879 19055030 -70449523 + AluJb SINE Alu 7 141 -171 2165 87 0 10 chr17 19055030 19055329 -70449224 + AluY SINE Alu 10 305 -6 1089 177 4 65 chr17 19055329 19055409 -70449144 + AluJb SINE Alu 141 224 -88 2112 99 3 13 chr17 19055419 19055723 -70448830 - AluSq SINE Alu -1 312 12 180 97 0 0 chr17 19055911 19055942 -70448611 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1561 152 0 22 chr17 19055952 19056222 -70448331 - AluSx SINE Alu -38 274 11 1786 129 0 23 chr17 19056508 19056810 -70447743 + AluSg SINE Alu 1 295 -15 3959 180 61 25 chr17 19056810 19057095 -70447458 + L1MB7 LINE L1 4766 5039 -1145 1907 119 39 3 chr17 19057095 19057380 -70447173 + AluSx SINE Alu 1 295 -17 3959 180 61 25 chr17 19057380 19057577 -70446976 + L1MB7 LINE L1 5039 5228 -956 1392 150 82 75 chr17 19057577 19057871 -70446682 - AluJo SINE Alu -16 296 1 3959 180 61 25 chr17 19057871 19058766 -70445787 + L1MB7 LINE L1 5228 6184 0 2476 58 0 6 chr17 19059116 19059427 -70445126 - AluY SINE Alu -2 309 1 2237 94 0 0 chr17 19059893 19060190 -70444363 + AluSg SINE Alu 1 297 -13 1812 125 0 39 chr17 19060220 19060532 -70444021 + AluSp SINE Alu 1 300 -13 2238 102 0 3 chr17 19111838 19112148 -70392405 + AluSc SINE Alu 2 310 0 1944 157 0 22 chr17 19112341 19112480 -70392073 + AluSx SINE Alu 1 142 -170 2092 94 0 0 chr17 19112480 19112745 -70391808 + AluSx SINE Alu 40 304 -8 1944 157 0 22 chr17 19112745 19112917 -70391636 + AluSx SINE Alu 142 305 -7 263 247 49 0 chr17 19112948 19113029 -70391524 + L1MC4 LINE L1 7573 7657 -385 2171 95 7 7 chr17 19113173 19113467 -70391086 + AluSx SINE Alu 1 294 -18 810 241 48 19 chr17 19113475 19113745 -70390808 + L1MC4 LINE L1 7765 8042 0 1912 150 17 10 chr17 19114447 19114747 -70389806 + AluJo SINE Alu 1 302 -10 2166 72 28 21 chr17 19114836 19115127 -70389426 + AluSp SINE Alu 1 293 -20 345 157 52 0 chr17 19115129 19115244 -70389309 + (TA)n Simple_repeat Simple_repeat 2 122 0 900 121 0 57 chr17 19115298 19115439 -70389114 + AluSg SINE Alu 1 133 -177 2233 106 3 0 chr17 19115439 19115731 -70388822 + AluSx SINE Alu 1 293 -19 1700 204 21 0 chr17 19115924 19116213 -70388340 + AluJo SINE Alu 1 295 -17 703 184 201 6 chr17 19116539 19116713 -70387840 - MER3 DNA MER1_type -1 208 1 1505 156 118 15 chr17 19116762 19116867 -70387686 + AluJo SINE Alu 2 95 -217 1844 178 0 13 chr17 19116867 19117165 -70387388 + AluJb SINE Alu 1 294 -18 1505 156 118 15 chr17 19117165 19117322 -70387231 + AluJo SINE Alu 95 291 -21 2326 106 0 7 chr17 19117720 19118021 -70386532 - AluSg SINE Alu -11 299 1 2028 123 20 0 chr17 19118393 19118685 -70385868 - AluSx SINE Alu -14 298 1 586 78 26 0 chr17 19118696 19118773 -70385780 - AluSg/x SINE Alu -18 292 214 28 0 0 0 chr17 19118927 19118955 -70385598 + AT_rich Low_complexity Low_complexity 1 28 0 2301 100 7 3 chr17 19118960 19119270 -70385283 + AluY SINE Alu 1 311 0 280 322 33 22 chr17 19119568 19119691 -70384862 - MIR SINE MIR -59 149 32 238 336 164 17 chr17 19119764 19119871 -70384682 + L2 LINE L2 2501 2591 -723 1815 106 4 16 chr17 19119871 19120125 -70384428 - AluSg SINE Alu -16 294 44 238 336 164 17 chr17 19120125 19120433 -70384120 + L2 LINE L2 2591 2977 -337 2049 132 3 10 chr17 19120714 19121018 -70383535 - AluJo SINE Alu -10 302 1 618 136 0 0 chr17 19121072 19121160 -70383393 + AluS SINE Alu 1 88 -225 2002 109 0 63 chr17 19121162 19121464 -70383089 + AluSg SINE Alu 13 295 -15 2468 81 3 0 chr17 19122165 19122472 -70382081 - AluSx SINE Alu -4 308 1 192 306 41 0 chr17 19122609 19122658 -70381895 - MIR SINE MIR -67 141 91 214 282 14 28 chr17 19122896 19122967 -70381586 - MIR SINE MIR -58 150 81 441 256 120 8 chr17 19123011 19123144 -70381409 - MIR SINE MIR -11 251 104 1996 77 0 49 chr17 19123281 19123428 -70381125 + AluSq SINE Alu 1 129 -184 2178 78 39 0 chr17 19123428 19123712 -70380841 + AluSx SINE Alu 1 295 -17 1996 77 0 49 chr17 19123712 19123851 -70380702 + AluSq SINE Alu 129 273 -40 551 259 17 2 chr17 19124914 19125098 -70379455 + MIR SINE MIR 29 256 -6 3063 126 64 42 chr17 19125297 19125893 -70378660 + MER4B LTR ERV1 1 609 -1 214 307 69 30 chr17 19125909 19126010 -70378543 + L2 LINE L2 3149 3253 -19 526 286 131 56 chr17 19126028 19126109 -70378444 - L2 LINE L2 -5 3267 3193 1822 151 3 11 chr17 19126109 19126418 -70378135 + AluSx SINE Alu 1 307 0 526 286 131 56 chr17 19126418 19126856 -70377697 - L2 LINE L2 -79 3193 2701 2086 138 3 0 chr17 19126857 19127162 -70377391 + AluSg SINE Alu 1 306 -4 1383 167 0 14 chr17 19127301 19127516 -70377037 + AluJo SINE Alu 71 282 -30 535 273 0 8 chr17 19127861 19127982 -70376571 + MER5A DNA MER1_type 1 120 -69 1155 157 0 6 chr17 19127999 19128171 -70376382 + AluSg/x SINE Alu 125 295 -17 270 224 45 0 chr17 19128172 19128239 -70376314 + MER5A DNA MER1_type 115 184 -5 2617 61 0 0 chr17 19128398 19128708 -70375845 - AluY SINE Alu -1 310 1 2213 116 7 0 chr17 19128708 19129002 -70375551 - AluSx SINE Alu -16 296 1 2353 83 0 17 chr17 19129013 19129314 -70375239 - AluY SINE Alu -15 296 1 813 279 188 15 chr17 19129434 19129832 -70374721 - L2 LINE L2 -1 3312 2846 2163 112 0 14 chr17 19130029 19130337 -70374216 - AluSx SINE Alu 0 304 1 2658 45 0 10 chr17 19130339 19130652 -70373901 - AluY SINE Alu -1 310 1 1064 133 0 0 chr17 19130652 19130795 -70373758 - AluSq/x SINE Alu -169 143 1 356 286 0 0 chr17 19130900 19130998 -70373555 + MLT1I LTR MaLR 81 178 -231 182 162 54 0 chr17 19131096 19131170 -70373383 + (TA)n Simple_repeat Simple_repeat 1 78 0 1027 247 53 40 chr17 19131176 19131535 -70373018 - MLT1E LTR MaLR -24 569 193 216 213 0 0 chr17 19131541 19131602 -70372951 + G-rich Low_complexity Low_complexity 5 65 0 436 293 21 4 chr17 19131603 19131776 -70372777 - MLT1E LTR MaLR -372 195 17 2179 103 0 39 chr17 19131793 19132103 -70372450 - AluSc SINE Alu -1 308 11 2159 79 4 4 chr17 19132113 19132380 -70372173 - AluSp SINE Alu -33 280 14 805 107 0 0 chr17 19132386 19132489 -70372064 - AluSg/x SINE Alu -18 294 192 355 158 134 0 chr17 19132518 19132600 -70371953 + MLT1I LTR MaLR 317 409 0 425 266 16 11 chr17 19132604 19132723 -70371830 - MIR SINE MIR -80 128 27 189 74 0 0 chr17 19132726 19132753 -70371800 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 686 212 0 40 chr17 19132754 19132905 -70371648 - FRAM SINE Alu -31 145 1 332 231 67 10 chr17 19133252 19133356 -70371197 - MIR3 SINE MIR -42 166 57 2230 111 14 0 chr17 19133548 19133845 -70370708 - AluSg SINE Alu -9 301 1 300 274 32 11 chr17 19133939 19134034 -70370519 - MLT1K LTR MaLR 0 588 492 1274 178 108 37 chr17 19134139 19134438 -70370115 - AluJo SINE Alu 0 318 1 1923 107 7 11 chr17 19134460 19134732 -70369821 - AluSx SINE Alu -7 305 35 635 238 29 79 chr17 19134758 19135098 -70369455 - L1ME2 LINE L1 -1 6232 5910 1002 162 6 35 chr17 19135111 19135284 -70369269 - FRAM SINE Alu -6 170 3 2243 89 0 67 chr17 19135288 19135615 -70368938 - AluSg SINE Alu -5 305 1 2195 120 0 3 chr17 19135619 19135910 -70368643 - AluSx SINE Alu -22 290 1 2222 196 20 32 chr17 19135915 19136133 -70368420 - L1ME2 LINE L1 -347 5888 5669 2541 88 0 0 chr17 19136133 19136440 -70368113 - AluY SINE Alu -4 307 1 2222 196 20 32 chr17 19136440 19136717 -70367836 - L1ME2 LINE L1 -566 5669 5399 23 0 0 0 chr17 19136767 19136790 -70367763 + AT_rich Low_complexity Low_complexity 1 23 0 2079 115 3 3 chr17 19136790 19137078 -70367475 - AluSx SINE Alu -24 288 1 1576 238 22 24 chr17 19137098 19137497 -70367056 - L1ME2 LINE L1 -3192 3023 2624 2139 122 3 10 chr17 19137497 19137792 -70366761 - AluSx SINE Alu -19 293 1 1576 238 22 24 chr17 19137792 19137851 -70366702 - L1ME2 LINE L1 -3591 2624 2566 262 212 256 15 chr17 19137988 19138125 -70366428 - L1MB8 LINE L1 -21 6157 5988 1121 153 118 25 chr17 19138126 19138138 -70366415 - AluJb SINE Alu -4 308 299 2556 77 0 0 chr17 19138138 19138448 -70366105 - AluY SINE Alu -1 310 1 1121 153 118 25 chr17 19138448 19138638 -70365915 - AluJb SINE Alu -13 299 87 1249 207 43 7 chr17 19138639 19138919 -70365634 - L1MB7 LINE L1 -165 6019 5730 1248 154 0 62 chr17 19138920 19139101 -70365452 - AluJo SINE Alu -3 309 118 2382 67 14 14 chr17 19139101 19139398 -70365155 - AluY SINE Alu -12 299 3 2320 105 3 6 chr17 19139404 19139717 -70364836 - AluSx SINE Alu 0 312 1 1248 154 0 62 chr17 19139717 19139755 -70364798 - AluJo SINE Alu -199 113 97 3131 224 51 46 chr17 19139757 19140920 -70363633 - L1M4 LINE L1 -2451 3695 2528 939 219 31 25 chr17 19140933 19141091 -70363462 - AluJo SINE Alu -31 281 125 2103 120 23 16 chr17 19141091 19141400 -70363153 - AluSx SINE Alu -1 311 1 198 0 0 0 chr17 19141403 19141425 -70363128 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 939 219 31 25 chr17 19141425 19141458 -70363095 - AluJo SINE Alu -188 124 85 3695 150 32 14 chr17 19141461 19142176 -70362377 - L1MB3 LINE L1 -133 6050 5323 2326 105 0 0 chr17 19142176 19142470 -70362083 - AluSx SINE Alu -18 294 1 274 238 14 77 chr17 19142493 19142528 -70362025 - L1ME2 LINE L1 -4857 1539 1503 2519 70 0 0 chr17 19142528 19142829 -70361724 - AluY SINE Alu -10 301 1 274 238 14 77 chr17 19142829 19142936 -70361617 - L1ME2 LINE L1 -4893 1503 1406 24 0 0 0 chr17 19142951 19142975 -70361578 + AT_rich Low_complexity Low_complexity 1 24 0 2223 87 3 24 chr17 19142979 19143298 -70361255 + AluSp SINE Alu 3 315 0 1639 207 65 2 chr17 19143298 19143496 -70361057 + L1M4 LINE L1 4404 4588 -1558 405 0 0 0 chr17 19143496 19143541 -70361012 + (TG)n Simple_repeat Simple_repeat 2 46 0 1639 207 65 2 chr17 19143541 19143757 -70360796 + L1M4 LINE L1 4588 4844 -1302 2398 55 7 0 chr17 19143769 19144059 -70360494 - AluSp SINE Alu -21 292 1 4446 161 118 27 chr17 19144105 19145073 -70359480 + MER52A LTR ERV1 217 1233 -522 1105 58 0 36 chr17 19145073 19145212 -70359341 + AluSq/x SINE Alu 1 134 -179 2311 91 13 0 chr17 19145213 19145511 -70359042 + AluSq SINE Alu 1 302 -11 2305 133 40 3 chr17 19145514 19145889 -70358664 + L1PA15 LINE L1 5771 6159 -6 1537 142 83 31 chr17 19145889 19146177 -70358376 + AluJo SINE Alu 1 303 -9 305 222 0 62 chr17 19146331 19146412 -70358141 + L2 LINE L2 3163 3238 -75 34 55 0 0 chr17 19146900 19146955 -70357598 + GC_rich Low_complexity Low_complexity 1 55 0 24 0 0 0 chr17 19147124 19147148 -70357405 + GC_rich Low_complexity Low_complexity 1 24 0 266 274 14 0 chr17 19147566 19147639 -70356914 - MIR SINE MIR -85 123 50 340 217 225 43 chr17 19147968 19148106 -70356447 - MIR SINE MIR -99 163 1 22 0 0 0 chr17 19148690 19148712 -70355841 + GC_rich Low_complexity Low_complexity 1 22 0 425 258 0 0 chr17 19149145 19149242 -70355311 + MIR SINE MIR 51 147 -61 2415 67 0 0 chr17 19150216 19150500 -70354053 + AluSp SINE Alu 3 286 -27 420 250 88 22 chr17 19150502 19150638 -70353915 - L2 LINE L2 -2 3311 3167 971 78 0 0 chr17 19150640 19150756 -70353797 + AluSq/x SINE Alu 1 116 -197 2281 89 0 36 chr17 19150756 19150872 -70353681 + AluSq SINE Alu 1 120 -193 2083 133 3 10 chr17 19150872 19151172 -70353381 + AluSx SINE Alu 1 298 -14 2281 89 0 36 chr17 19151172 19151359 -70353194 + AluSq SINE Alu 120 293 -20 3676 150 25 59 chr17 19151569 19151610 -70352943 - L1MB7 LINE L1 0 6184 6143 2427 76 0 0 chr17 19151610 19151901 -70352652 + AluSg SINE Alu 1 291 -19 3676 150 25 59 chr17 19151901 19152412 -70352141 - L1MB7 LINE L1 -41 6143 5667 1671 191 3 7 chr17 19152412 19152705 -70351848 - AluJo SINE Alu -2 310 19 3676 150 25 59 chr17 19152705 19152978 -70351575 - L1MB7 LINE L1 -517 5667 5386 808 202 12 57 chr17 19153021 19153124 -70351429 + L1M4 LINE L1 5067 5173 -973 2488 74 0 0 chr17 19153124 19153422 -70351131 - AluY SINE Alu -13 298 1 808 202 12 57 chr17 19153422 19153565 -70350988 + L1M4 LINE L1 5173 5302 -844 886 132 39 0 chr17 19153565 19153694 -70350859 + AluJo SINE Alu 1 134 -178 365 175 39 10 chr17 19153747 19153850 -70350703 + L1M LINE L1 5290 5395 -789 1688 142 3 82 chr17 19153853 19154170 -70350383 + AluSx SINE Alu 1 292 -20 1097 96 0 0 chr17 19154175 19154311 -70350242 + AluSq/x SINE Alu 1 136 -177 1139 182 4 54 chr17 19154311 19154353 -70350200 - L1MB7 LINE L1 -1080 5066 5023 2502 54 0 10 chr17 19154353 19154650 -70349903 + AluY SINE Alu 1 294 -17 1139 182 4 54 chr17 19154650 19154865 -70349688 - L1MB7 LINE L1 -1123 5023 4822 281 291 142 31 chr17 19155279 19155406 -70349147 + MIR SINE MIR 9 149 -113 279 208 0 19 chr17 19155412 19155465 -70349088 + L2 LINE L2 3210 3261 -11 259 275 33 17 chr17 19155533 19155653 -70348900 + MER103 DNA DNA 32 153 -13 2492 79 0 7 chr17 19155658 19155961 -70348592 + AluSp SINE Alu 1 301 -12 1791 143 3 48 chr17 19155985 19156279 -70348274 + AluJo SINE Alu 11 291 -21 2280 82 9 32 chr17 19156288 19156603 -70347950 + AluSp SINE Alu 1 308 -5 198 371 90 22 chr17 19156890 19156979 -70347574 - L2 LINE L2 -18 3295 3201 187 306 42 49 chr17 19157032 19157176 -70347377 - L2 LINE L2 -205 3067 2925 2367 84 0 3 chr17 19157336 19157633 -70346920 - AluSx SINE Alu -16 296 1 804 303 125 16 chr17 19157817 19158393 -70346160 + L2 LINE L2 2669 3311 -2 24 0 0 0 chr17 19158424 19158448 -70346105 + AT_rich Low_complexity Low_complexity 1 24 0 576 295 39 73 chr17 19158554 19158995 -70345558 - L2 LINE L2 -5 3267 2842 2311 90 16 13 chr17 19159043 19159353 -70345200 - AluY SINE Alu 0 311 1 1750 165 0 26 chr17 19159353 19159656 -70344897 - AluSg SINE Alu -15 295 1 2226 106 0 0 chr17 19159668 19159974 -70344579 - AluSq SINE Alu 0 306 1 290 20 61 20 chr17 19159984 19160033 -70344520 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 2189 93 4 0 chr17 19160033 19160312 -70344241 - AluY SINE Alu -31 280 1 2529 77 0 0 chr17 19160336 19160647 -70343906 - AluY SINE Alu 0 311 1 2488 206 60 52 chr17 19160656 19160785 -70343768 + L1MB7 LINE L1 5315 5441 -738 424 205 116 18 chr17 19160785 19160897 -70343656 + FLAM_A SINE Alu 1 123 -10 2488 206 60 52 chr17 19160897 19160981 -70343572 + L1MB7 LINE L1 5441 5523 -656 2115 106 10 3 chr17 19160981 19161282 -70343271 + AluSx SINE Alu 1 303 -9 2488 206 60 52 chr17 19161282 19161494 -70343059 + L1MB7 LINE L1 5523 5732 -447 2000 120 3 13 chr17 19161494 19161802 -70342751 + AluSq SINE Alu 2 306 -7 2291 97 3 0 chr17 19161804 19162112 -70342441 + AluSp SINE Alu 3 311 -2 2488 206 60 52 chr17 19162112 19162227 -70342326 + L1MB7 LINE L1 5732 5845 -334 2040 116 10 10 chr17 19162227 19162528 -70342025 + AluSq SINE Alu 1 301 -12 2488 206 60 52 chr17 19162528 19162770 -70341783 + L1MB7 LINE L1 5845 6175 -4 653 273 18 104 chr17 19162821 19163516 -70341037 + L1ME1 LINE L1 5800 6150 -16 2123 109 6 10 chr17 19163128 19163440 -70341113 - AluSx SINE Alu -1 311 1 402 162 5 189 chr17 19163440 19163553 -70341000 + L1MA10 LINE L1 6202 6334 0 1902 109 17 24 chr17 19167180 19167473 -70337080 - AluSq SINE Alu -22 291 1 2053 117 0 28 chr17 19167500 19167817 -70336736 + AluSx SINE Alu 1 308 -4 936 160 0 41 chr17 19167973 19168142 -70336411 - FAM SINE Alu -13 162 1 696 218 77 0 chr17 19168269 19168439 -70336114 + MER5A DNA MER1_type 1 183 -6 180 339 201 47 chr17 19168693 19169012 -70335541 + L2 LINE L2 2437 2804 -510 225 341 170 22 chr17 19169069 19169380 -70335173 + L2 LINE L2 2957 3313 0 322 316 105 26 chr17 19169429 19169581 -70334972 - MIR SINE MIR -12 250 87 276 314 24 8 chr17 19169720 19169844 -70334709 - LTR67 LTR ERVL -7 550 425 243 222 19 0 chr17 19170031 19170085 -70334468 - MLT1K LTR MaLR -493 95 41 281 249 87 104 chr17 19170121 19170228 -70334325 - L1ME4a LINE L1 -65 6056 5949 1946 113 7 14 chr17 19170228 19170510 -70334043 - AluSg SINE Alu -30 280 1 281 249 87 104 chr17 19170510 19170643 -70333910 - L1ME4a LINE L1 -172 5949 5820 1902 142 10 20 chr17 19170643 19170806 -70333747 - AluSx SINE Alu -13 299 139 2172 117 3 0 chr17 19170806 19171113 -70333440 - AluSg SINE Alu -2 308 1 1902 142 10 20 chr17 19171113 19171251 -70333302 - AluSx SINE Alu -173 139 1 491 273 107 39 chr17 19172174 19172270 -70332283 - MIR SINE MIR -2 260 172 2321 72 0 3 chr17 19172270 19172576 -70331977 - AluY SINE Alu -6 305 1 491 273 107 39 chr17 19172576 19172725 -70331828 - MIR SINE MIR -90 172 7 1729 164 14 0 chr17 19172992 19173307 -70331246 + AluJb SINE Alu 1 319 0 2388 69 7 0 chr17 19173317 19173620 -70330933 + AluY SINE Alu 1 305 -6 2140 112 7 0 chr17 19173678 19173974 -70330579 - AluSq SINE Alu -15 298 1 2089 116 6 6 chr17 19174029 19174340 -70330213 - AluY SINE Alu 0 311 1 880 167 0 6 chr17 19174611 19174767 -70329786 + L1MB7 LINE L1 6014 6168 -16 547 189 9 0 chr17 19174884 19174990 -70329563 - FRAM SINE Alu -2 174 68 2286 106 0 0 chr17 19175067 19175378 -70329175 - AluY SINE Alu 0 311 1 470 264 18 0 chr17 19176034 19176144 -70328409 - L1MC1 LINE L1 -123 6210 6099 778 123 25 8 chr17 19176144 19176266 -70328287 + L1MC1 LINE L1 6210 6333 0 1022 225 100 19 chr17 19176272 19176594 -70327959 - L1MC1 LINE L1 -743 5403 5109 1607 182 7 24 chr17 19176594 19176890 -70327663 - AluJo SINE Alu -2 310 20 1022 225 100 19 chr17 19176890 19176962 -70327591 - L1MC1 LINE L1 -1037 5109 5044 1923 113 7 27 chr17 19176962 19177125 -70327428 - AluSq SINE Alu -19 294 138 2427 76 0 0 chr17 19177125 19177429 -70327124 - AluY SINE Alu -5 306 3 1923 113 7 27 chr17 19177429 19177565 -70326988 - AluSq SINE Alu -175 138 1 1022 225 100 19 chr17 19177565 19177777 -70326776 - L1MC1 LINE L1 -1102 5044 4851 2302 75 10 0 chr17 19177777 19178072 -70326481 - AluSc SINE Alu -11 298 1 1022 225 100 19 chr17 19178072 19178442 -70326111 - L1MC1 LINE L1 -1295 4851 4353 1274 91 0 0 chr17 19178563 19178728 -70325825 - AluY SINE Alu -19 292 128 4833 110 77 41 chr17 19178755 19178938 -70325615 - L1MA3 LINE L1 0 6305 6130 2183 103 3 0 chr17 19178938 19179230 -70325323 - AluSx SINE Alu -19 293 1 4833 110 77 41 chr17 19179230 19179296 -70325257 - L1MA3 LINE L1 -175 6130 6068 2485 66 0 0 chr17 19179296 19179600 -70324953 - AluY SINE Alu -7 304 1 4833 110 77 41 chr17 19179600 19179839 -70324714 - L1MA3 LINE L1 -237 6068 5839 1971 108 7 0 chr17 19179839 19180118 -70324435 - AluSg SINE Alu 0 310 30 4833 110 77 41 chr17 19180118 19180539 -70324014 - L1MA3 LINE L1 -466 5839 5361 931 180 0 0 chr17 19180539 19180700 -70323853 - AluJo/FRAM SINE Alu -11 301 141 1662 165 53 3 chr17 19180703 19180988 -70323565 - AluJb SINE Alu -13 299 1 11026 159 47 41 chr17 19180992 19181492 -70323061 - L1MA3 LINE L1 -782 5364 4869 2208 104 0 0 chr17 19181492 19181791 -70322762 - AluSx SINE Alu -13 299 1 11026 159 47 41 chr17 19181791 19182025 -70322528 - L1MA3 LINE L1 -1277 4869 4638 2432 63 0 3 chr17 19182025 19182325 -70322228 - AluY SINE Alu -12 299 1 11026 159 47 41 chr17 19182325 19183813 -70320740 - L1MA3 LINE L1 -1508 4638 3191 2215 104 3 0 chr17 19183813 19184122 -70320431 - AluSg SINE Alu 0 310 1 11026 159 47 41 chr17 19184122 19184546 -70320007 - L1MA3 LINE L1 -2955 3191 2771 241 271 271 18 chr17 19184563 19184733 -70319820 - MIR SINE MIR -1 261 49 251 319 35 26 chr17 19184765 19184878 -70319675 - MIR SINE MIR -14 248 135 2195 97 7 7 chr17 19185047 19185347 -70319206 + AluSg SINE Alu 1 300 -10 668 184 57 13 chr17 19185399 19185557 -70318996 + L1M4 LINE L1 5152 5316 -830 244 251 17 0 chr17 19185558 19185625 -70318928 + MIR SINE MIR 64 138 -70 232 211 42 28 chr17 19185800 19185871 -70318682 + MER5C DNA MER1_type 228 299 -25 * 382 346 48 10 chr17 19185861 19186069 -70318484 + L2 LINE L2 2832 3047 -266 201 147 0 0 chr17 19186534 19186568 -70317985 + (TG)n Simple_repeat Simple_repeat 1 34 0 197 365 35 0 chr17 19186583 19186698 -70317855 - L2 LINE L2 -340 2974 2856 226 241 139 13 chr17 19187623 19187702 -70316851 + L2 LINE L2 3138 3226 -46 273 298 105 0 chr17 19188388 19188512 -70316041 + MIR3 SINE MIR 33 169 -39 814 99 91 0 chr17 19188692 19188813 -70315740 + AluJo SINE Alu 5 136 -176 1544 176 3 51 chr17 19188814 19189126 -70315427 + AluJb SINE Alu 3 299 -13 235 284 78 28 chr17 19189142 19189283 -70315270 - MLT1K LTR MaLR -63 525 378 22 35 0 0 chr17 19192997 19193026 -70311527 + AT_rich Low_complexity Low_complexity 1 29 0 2165 102 3 0 chr17 19193390 19193684 -70310869 + AluSx SINE Alu 1 295 -17 213 333 31 0 chr17 19198000 19198096 -70306457 - MIR SINE MIR -133 129 31 203 259 250 17 chr17 19198079 19198195 -70306358 + MIR3 SINE MIR 5 147 -61 * 2168 101 0 7 chr17 19200603 19200901 -70303652 - AluSx SINE Alu -16 296 1 2094 81 7 7 chr17 19200910 19201219 -70303334 - AluY SINE Alu 0 309 1 279 0 0 0 chr17 19201649 19201680 -70302873 + (CA)n Simple_repeat Simple_repeat 1 31 0 375 297 187 30 chr17 19202017 19202552 -70302001 + L1MEd LINE L1 980 1648 -928 1820 165 0 0 chr17 19202638 19202929 -70301624 + AluJo SINE Alu 1 291 -21 390 354 50 61 chr17 19203007 19203349 -70301204 + L1MEd LINE L1 1900 2237 -4159 478 302 38 36 chr17 19203350 19203794 -70300759 + L1MEd LINE L1 2199 2643 -3572 520 317 85 31 chr17 19203825 19204084 -70300469 - L1MEc LINE L1 -4063 2333 2061 2270 101 0 9 chr17 19204111 19204427 -70300126 - AluSq SINE Alu 0 313 1 279 0 0 0 chr17 19204509 19204540 -70300013 + (TAGA)n Simple_repeat Simple_repeat 2 32 0 190 224 6 56 chr17 19204807 19204968 -70299585 + G-rich Low_complexity Low_complexity 5 157 0 367 244 274 30 chr17 19205018 19205219 -70299334 - MIR SINE MIR -8 254 5 765 291 107 9 chr17 19205851 19206188 -70298365 - L1MB2 LINE L1 0 6171 5802 186 43 0 0 chr17 19206190 19206213 -70298340 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1518 90 21 21 chr17 19206213 19206446 -70298107 - AluSx SINE Alu -29 283 51 317 236 194 7 chr17 19206467 19206611 -70297942 + L2 LINE L2 2625 2795 -519 353 293 30 0 chr17 19207950 19208083 -70296470 + MIR3 SINE MIR 25 161 -47 2251 67 14 0 chr17 19208357 19208663 -70295890 - AluSp SINE Alu 0 313 4 339 242 212 32 chr17 19209088 19209278 -70295275 + MLT1G LTR MaLR 104 330 -265 283 214 97 19 chr17 19209314 19209417 -70295136 + MLT1G LTR MaLR 440 550 -5 240 218 0 18 chr17 19209513 19209568 -70294985 + MLT1I LTR MaLR 115 168 -241 436 148 0 12 chr17 19209709 19209790 -70294763 + MLT1I LTR MaLR 330 409 0 1199 282 24 16 chr17 19209902 19210274 -70294279 - LTR16C LTR ERVL -19 472 98 1911 123 25 44 chr17 19211579 19211853 -70292700 + AluSx SINE Alu 1 270 -42 405 0 0 0 chr17 19211853 19211898 -70292655 + (TAAAA)n Simple_repeat Simple_repeat 2 46 0 1911 123 25 44 chr17 19211898 19211940 -70292613 + AluSx SINE Alu 270 311 -1 1944 211 11 47 chr17 19211940 19212014 -70292539 + L1 LINE L1 2957 3032 -3114 2380 50 0 10 chr17 19212014 19212313 -70292240 + AluY SINE Alu 1 296 -15 1944 211 11 47 chr17 19212313 19212872 -70291681 + L1 LINE L1 3032 3567 -2579 1492 158 0 33 chr17 19212875 19213147 -70291406 + AluJo SINE Alu 16 278 -34 210 37 0 0 chr17 19213147 19213174 -70291379 + (TC)n Simple_repeat Simple_repeat 2 28 0 1761 106 23 50 chr17 19213468 19213770 -70290783 - AluSx SINE Alu -18 294 1 264 230 169 20 chr17 19214336 19214484 -70290069 + LTR67 LTR ERVL 387 556 -1 853 55 0 0 chr17 19214647 19214756 -70289797 + MER41A LTR ERV1 1 109 -445 918 98 0 8 chr17 19214871 19215004 -70289549 + MER41B LTR ERV1 106 237 -398 213 280 88 48 chr17 19215059 19215184 -70289369 + L2 LINE L2 2922 3051 -221 292 282 0 47 chr17 19215266 19215351 -70289202 + MIR SINE MIR 65 145 -117 2651 112 115 137 chr17 19215353 19215502 -70289051 + MER4A LTR ERV1 1 152 -512 2223 86 3 10 chr17 19215502 19215803 -70288750 - AluSc SINE Alu -10 299 1 2651 112 115 137 chr17 19215803 19215821 -70288732 + MER4A LTR ERV1 152 169 -495 1191 55 0 0 chr17 19215821 19215967 -70288586 + L1PA11 LINE L1 6028 6173 -1 2651 112 115 137 chr17 19215967 19216477 -70288076 + MER4A LTR ERV1 169 664 0 2204 152 40 72 chr17 19216744 19216807 -70287746 + Tigger1 DNA MER2_type 16 79 -2339 2256 100 0 3 chr17 19216807 19217118 -70287435 + AluSx SINE Alu 1 310 -2 2204 152 40 72 chr17 19217118 19217529 -70287024 + Tigger1 DNA MER2_type 79 475 -1943 1025 116 0 0 chr17 19217533 19217679 -70286874 - FRAM SINE Alu -21 155 10 11502 108 47 26 chr17 19217691 19219002 -70285551 + Tigger1 DNA MER2_type 464 1829 -589 1665 164 14 7 chr17 19219002 19219294 -70285259 - AluJb SINE Alu -18 294 1 11502 108 47 26 chr17 19219294 19219897 -70284656 + Tigger1 DNA MER2_type 1829 2418 0 441 276 191 0 chr17 19220282 19220434 -70284119 + MER91A DNA MER1_type 9 189 -7 429 290 41 12 chr17 19221367 19221536 -70283017 - MER5B DNA MER1_type -4 174 1 439 221 181 0 chr17 19221664 19221791 -70282762 + MER5A DNA MER1_type 1 150 -39 455 226 151 13 chr17 19221841 19221907 -70282646 - MER5A DNA MER1_type 0 189 133 2025 99 24 7 chr17 19221907 19222200 -70282353 + AluY SINE Alu 1 298 -13 455 226 151 13 chr17 19222200 19222292 -70282261 - MER5A DNA MER1_type -56 133 9 1904 116 0 36 chr17 19222413 19222746 -70281807 + AluSx SINE Alu 8 329 0 2063 181 28 7 chr17 19222749 19223175 -70281378 - L1MB7 LINE L1 -64 6120 5686 244 315 81 9 chr17 19223355 19223466 -70281087 + MIR SINE MIR 28 146 -116 199 282 223 19 chr17 19223924 19224027 -70280526 + MIR SINE MIR 44 167 -95 293 263 0 53 chr17 19224131 19224226 -70280327 + MIR3 SINE MIR 114 203 -5 1650 247 46 46 chr17 19224818 19225361 -70279192 - L1ME2 LINE L1 0 6164 5622 187 211 14 14 chr17 19225382 19225453 -70279100 + GA-rich Low_complexity Low_complexity 2 72 0 496 283 29 1 chr17 19225551 19225707 -70278846 + MIR SINE MIR 24 182 -63 534 284 87 22 chr17 19225872 19226055 -70278498 - MIR SINE MIR -8 254 60 1122 196 87 75 chr17 19226064 19226090 -70278463 - L1MB5 LINE L1 -217 5957 5933 2093 107 0 19 chr17 19226090 19226399 -70278154 - AluSx SINE Alu -9 303 1 1122 196 87 75 chr17 19226399 19226730 -70277823 - L1MB5 LINE L1 -241 5933 5596 252 0 0 0 chr17 19226732 19226760 -70277793 + (T)n Simple_repeat Simple_repeat 1 28 0 467 194 276 0 chr17 19228151 19228285 -70276268 - MER45A DNA AcHobo -1 177 7 530 202 15 14 chr17 19228832 19229009 -70275544 - L1MB3 LINE L1 0 6183 5882 196 262 131 0 chr17 19229293 19229377 -70275176 - MIR3 SINE MIR -53 155 61 208 0 62 0 chr17 19229574 19229606 -70274947 + (GA)n Simple_repeat Simple_repeat 1 34 0 766 277 154 9 chr17 19230014 19230562 -70273991 + L1MC4 LINE L1 6513 7369 -673 192 283 66 33 chr17 19230590 19230742 -70273811 + L2 LINE L2 2904 3060 -212 215 333 0 69 chr17 19231162 19231264 -70273289 + MIR3 SINE MIR 61 155 -53 573 269 62 39 chr17 19232237 19232445 -70272108 + MIR SINE MIR 31 243 -19 367 141 0 0 chr17 19232748 19232812 -70271741 + AluJ/FRAM SINE Alu 224 287 -15 460 281 0 8 chr17 19232868 19232989 -70271564 - AluJo SINE Alu -77 235 116 228 195 0 37 chr17 19232989 19233071 -70271482 + MER53 DNA DNA 81 159 -30 28 0 0 0 chr17 19233071 19233099 -70271454 + AT_rich Low_complexity Low_complexity 1 28 0 201 121 0 0 chr17 19233107 19233140 -70271413 + (TG)n Simple_repeat Simple_repeat 2 34 0 498 202 26 30 chr17 19233298 19233436 -70271117 - MER97a DNA MER1_type? 0 894 841 2103 116 0 7 chr17 19233436 19233738 -70270815 + AluSq SINE Alu 3 302 -11 498 202 26 30 chr17 19233738 19233796 -70270757 - MER97a DNA MER1_type? -53 841 784 2019 98 10 14 chr17 19234111 19234408 -70270145 - AluSp SINE Alu -16 297 2 1368 279 46 24 chr17 19234526 19235028 -70269525 - MER97c DNA MER1_type? -485 605 93 3141 159 66 15 chr17 19235028 19235923 -70268630 + LTR12 LTR ERV1 2 714 0 1157 207 16 12 chr17 19235959 19236201 -70268352 + AluJo SINE Alu 11 253 -59 1653 114 57 11 chr17 19236243 19236505 -70268048 - AluSx SINE Alu -25 287 14 563 274 131 8 chr17 19236625 19236877 -70267676 + LTR16C LTR ERVL 209 491 0 25 0 0 0 chr17 19236888 19236913 -70267640 + AT_rich Low_complexity Low_complexity 1 25 0 1950 122 31 0 chr17 19236929 19237223 -70267330 + AluSc SINE Alu 1 303 -6 305 247 103 14 chr17 19237792 19237965 -70266588 - MIR SINE MIR -63 145 3 * 585 288 121 30 chr17 19237965 19238489 -70266064 + L2 LINE L2 2746 3313 0 475 250 98 12 chr17 19238580 19238744 -70265809 - L1MC5 LINE L1 -11 7950 7773 675 268 91 81 chr17 19238815 19239088 -70265465 - MLT1E LTR MaLR -163 463 139 1474 175 13 32 chr17 19239088 19239396 -70265157 + AluJo SINE Alu 9 310 -2 675 268 91 81 chr17 19239396 19239497 -70265056 - MLT1E LTR MaLR -487 139 40 1218 263 131 16 chr17 19239918 19240380 -70264173 + MLT1F LTR MaLR 1 534 -8 381 315 9 0 chr17 19240389 19240500 -70264053 + LTR16C LTR ERVL 380 491 0 2131 103 0 7 chr17 19241008 19241300 -70263253 - AluSc SINE Alu -19 290 1 231 306 8 65 chr17 19241354 19241478 -70263075 + L2 LINE L2 2863 2979 -334 224 348 11 0 chr17 19242491 19242583 -70261970 + L3b LINE CR1 1132 1224 -359 233 294 76 17 chr17 19242775 19242894 -70261659 - MIR SINE MIR -67 141 16 413 269 185 28 chr17 19243044 19243418 -70261135 + L2 LINE L2 2628 3063 -250 2100 168 239 4 chr17 19243646 19244098 -70260455 + LTR64 LTR ERVK 1 558 0 593 281 54 5 chr17 19244837 19245022 -70259531 - MER91A DNA MER1_type -2 194 1 913 186 18 41 chr17 19245352 19245470 -70259083 + L1MB5 LINE L1 5551 5663 -515 2396 47 0 10 chr17 19245470 19245770 -70258783 + AluY SINE Alu 1 297 -14 913 186 18 41 chr17 19245770 19245895 -70258658 + L1MB5 LINE L1 5663 5789 -389 339 325 33 0 chr17 19245896 19246016 -70258537 + MIR SINE MIR 64 187 -75 1643 208 73 5 chr17 19246065 19246435 -70258118 + L1MB5 LINE L1 5780 6174 0 1398 193 0 39 chr17 19246437 19246743 -70257810 + AluJb SINE Alu 16 309 -3 341 310 36 50 chr17 19248203 19248387 -70256166 - MIR SINE MIR -43 219 33 2158 145 71 60 chr17 19248486 19248906 -70255647 + MSTC LTR MaLR 1 425 -3 294 298 99 14 chr17 19248956 19249097 -70255456 + MIR SINE MIR 96 248 -14 208 261 62 0 chr17 19250589 19250654 -70253899 + MIR3 SINE MIR 115 183 -25 208 357 0 13 chr17 19250701 19250855 -70253698 + GA-rich Low_complexity Low_complexity 2 153 0 429 197 39 28 chr17 19250861 19251039 -70253514 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 932 174 14 5 chr17 19251341 19251554 -70252999 - L1MD3 LINE L1 -2 7993 7779 1122 176 0 62 chr17 19251639 19251961 -70252592 + AluJb SINE Alu 84 390 0 562 208 0 0 chr17 19251961 19252057 -70252496 - MER58A DNA MER1_type -11 96 1 3225 223 27 8 chr17 19252103 19252875 -70251678 - L1MC4a LINE L1 -286 7522 6736 2167 66 0 7 chr17 19252905 19253179 -70251374 - AluSc SINE Alu -17 292 21 188 67 33 0 chr17 19253796 19253826 -70250727 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 265 174 248 28 chr17 19253832 19253941 -70250612 - L2 LINE L2 -22 3291 3159 312 27 0 0 chr17 19253941 19253978 -70250575 + (TG)n Simple_repeat Simple_repeat 1 37 0 442 306 134 14 chr17 19254501 19254717 -70249836 + MIR SINE MIR 16 257 -5 1258 281 51 57 chr17 19254741 19254809 -70249744 - L1ME4a LINE L1 -16 6105 6038 1727 132 0 63 chr17 19254809 19255142 -70249411 + AluSx SINE Alu 1 312 0 1258 281 51 57 chr17 19255142 19255749 -70248804 - L1ME4a LINE L1 -83 6038 5433 1734 169 3 28 chr17 19255749 19256069 -70248484 - AluJb SINE Alu 0 312 1 1258 281 51 57 chr17 19256069 19256177 -70248376 - L1ME4a LINE L1 -688 5433 5326 193 204 0 23 chr17 19256183 19256227 -70248326 - MIR SINE MIR -75 133 91 411 268 57 19 chr17 19256379 19256536 -70248017 - LTR16A1 LTR ERVL -78 379 217 406 288 126 42 chr17 19256740 19256931 -70247622 + MLT1K LTR MaLR 55 261 -327 744 309 112 22 chr17 19256941 19257342 -70247211 - L1ME3A LINE L1 -336 5834 5398 202 353 115 6 chr17 19257435 19257591 -70246962 + L2 LINE L2 2934 3106 -166 1782 127 11 95 chr17 19258784 19259098 -70245455 + L1MB7 LINE L1 5831 6109 -75 1669 202 3 3 chr17 19259098 19259410 -70245143 - AluJo SINE Alu 0 312 1 1782 127 11 95 chr17 19259410 19259473 -70245080 + L1MB7 LINE L1 6109 6176 -8 1328 227 101 26 chr17 19259536 19260003 -70244550 - MLT1J LTR MaLR -8 503 2 342 248 203 21 chr17 19261047 19261327 -70243226 - MLT1H1 LTR MaLR -1 554 201 3305 150 92 37 chr17 19261483 19262158 -70242395 + LTR62 LTR ERVK 3 714 -5 743 166 57 100 chr17 19262161 19262390 -70242163 + MLT1H LTR MaLR 65 283 -266 1939 141 20 27 chr17 19262559 19262857 -70241696 + AluSx SINE Alu 1 296 -16 1796 132 78 11 chr17 19262951 19263232 -70241321 + MER1B DNA MER1_type 40 339 0 1194 252 155 13 chr17 19263412 19264115 -70240438 - L2 LINE L2 -21 3292 2494 883 193 6 12 chr17 19264806 19264967 -70239586 - AluJb SINE Alu -16 296 137 284 323 69 21 chr17 19265378 19265567 -70238986 - L1ME LINE L1 -415 5747 5550 7931 186 109 16 chr17 19267540 19269144 -70235409 + MER52A LTR ERV1 3 1755 0 312 200 18 0 chr17 19269153 19269208 -70235345 + MER52A-int LTR ERV1 7 62 -7029 279 65 0 0 chr17 19269209 19269255 -70235298 - L1PA2 LINE L1 0 6155 6110 3316 123 21 28 chr17 19269255 19269703 -70234850 + MER52A-int LTR ERV1 46 491 -6600 1980 120 20 27 chr17 19269703 19270002 -70234551 + AluSx SINE Alu 2 298 -14 3316 123 21 28 chr17 19270002 19270083 -70234470 + MER52A-int LTR ERV1 491 571 -6520 7181 114 42 8 chr17 19270196 19271293 -70233260 + MER52A-int LTR ERV1 1698 2831 -4260 4986 172 64 60 chr17 19271375 19271486 -70233067 + MER57-int LTR ERV1 1977 2086 -5332 2101 91 0 4 chr17 19271486 19271751 -70232802 + AluSc SINE Alu 38 301 -8 4986 172 64 60 chr17 19271751 19273868 -70230685 + MER57-int LTR ERV1 2086 5739 -1679 584 217 0 0 chr17 19273900 19274006 -70230547 + MER52A LTR ERV1 1650 1755 0 1994 59 0 11 chr17 19274149 19274421 -70230132 - L1P LINE L1 -1168 4978 4710 5831 40 0 8 chr17 19274421 19275146 -70229407 + L1PA5 LINE L1 5426 6148 -6 1047 263 29 58 chr17 19275718 19276198 -70228355 + L1MC5 LINE L1 7471 7936 -25 250 335 60 33 chr17 19276491 19276673 -70227880 - L1MC4a LINE L1 -1800 6008 5822 1879 107 82 28 chr17 19276735 19277091 -70227462 + THE1C LTR MaLR 1 375 0 422 299 8 0 chr17 19277094 19277221 -70227332 - L1MC4a LINE L1 -1990 5818 5691 493 265 103 40 chr17 19277384 19277403 -70227150 + MIR SINE MIR 17 33 -229 1769 134 22 73 chr17 19277403 19277717 -70226836 + AluJo SINE Alu 1 298 -14 493 265 103 40 chr17 19277717 19277920 -70226633 + MIR SINE MIR 33 253 -9 231 61 0 0 chr17 19277922 19277955 -70226598 + (CAT)n Simple_repeat Simple_repeat 2 34 0 528 336 27 16 chr17 19278115 19278371 -70226182 - MLT1L LTR MaLR -5 610 352 1670 137 8 19 chr17 19279704 19279967 -70224586 + AluSq SINE Alu 2 261 -52 1443 220 35 9 chr17 19280138 19280484 -70224069 - Tigger6 DNA MER2_type -1233 364 10 185 91 0 30 chr17 19282037 19282070 -70222483 + (CA)n Simple_repeat Simple_repeat 2 33 0 219 69 0 0 chr17 19282098 19282127 -70222426 + (TCCA)n Simple_repeat Simple_repeat 4 32 0 1070 204 62 16 chr17 19282597 19282905 -70221648 - MER33 DNA MER1_type -2 322 1 613 309 62 21 chr17 19282905 19283148 -70221405 + L3 LINE CR1 1306 1558 -19 273 242 42 21 chr17 19284232 19284327 -70220226 + MER103 DNA DNA 59 155 -11 307 291 29 22 chr17 19284462 19284614 -70219939 + MER5B DNA MER1_type 23 186 -3 180 152 0 0 chr17 19285280 19285313 -70219240 + T-rich Low_complexity Low_complexity 1 33 0 793 232 145 56 chr17 19285536 19285929 -70218624 - MLT1C LTR MaLR -34 433 6 187 333 48 24 chr17 19286166 19286250 -70218303 + MIR SINE MIR 107 192 -70 342 239 0 0 chr17 19286552 19286661 -70217892 + (CCA)n Simple_repeat Simple_repeat 1 109 0 895 118 3 40 chr17 19286665 19286963 -70217590 + (CACCAT)n Simple_repeat Simple_repeat 1 287 0 606 93 0 0 chr17 19287010 19287096 -70217457 + HY3 scRNA scRNA 14 99 -2 21 0 0 0 chr17 19287096 19287117 -70217436 + AT_rich Low_complexity Low_complexity 1 21 0 185 339 17 0 chr17 19287236 19287295 -70217258 - MIR3 SINE MIR -48 160 101 322 327 72 14 chr17 19287535 19287813 -70216740 + L1M4 LINE L1 3966 4259 -1887 2387 71 13 13 chr17 19287866 19288175 -70216378 + AluY SINE Alu 1 309 -2 866 193 0 6 chr17 19288212 19288373 -70216180 + FRAM SINE Alu 1 160 -6 668 247 186 30 chr17 19289071 19289443 -70215110 - MLT1G LTR MaLR 0 590 161 2130 100 0 7 chr17 19289484 19289795 -70214758 + AluSx SINE Alu 5 313 0 452 355 36 7 chr17 19289840 19290147 -70214406 - MERVL LTR ERVL -1261 4224 3909 860 156 50 0 chr17 19290234 19290414 -70214139 - MER53 DNA DNA 0 189 1 1034 315 104 56 chr17 19290421 19291352 -70213201 - MERVL LTR ERVL -1841 3923 2948 216 111 0 0 chr17 19291361 19291397 -70213156 + (TC)n Simple_repeat Simple_repeat 1 36 0 34 42 0 0 chr17 19292205 19292253 -70212300 + AT_rich Low_complexity Low_complexity 1 48 0 402 305 96 28 chr17 19292477 19292628 -70211925 + L1ME4a LINE L1 5812 5978 -143 2228 130 0 3 chr17 19292628 19292935 -70211618 + AluSx SINE Alu 1 306 -6 402 305 96 28 chr17 19292935 19292960 -70211593 + L1ME4a LINE L1 5978 6000 -121 357 295 0 9 chr17 19292960 19293065 -70211488 - MLT1L LTR MaLR -390 225 122 209 238 0 63 chr17 19294027 19294090 -70210463 + L2 LINE L2 3243 3301 -12 253 364 21 29 chr17 19294426 19294566 -70209987 - MIR SINE MIR -58 204 66 2184 149 3 14 chr17 19294780 19295149 -70209404 - MLT1A1 LTR MaLR 0 365 1 2241 114 0 19 chr17 19295634 19295951 -70208602 - AluSx SINE Alu -1 311 1 354 161 58 11 chr17 19296304 19296391 -70208162 + AluSg/x SINE Alu 212 302 0 1961 127 27 13 chr17 19296450 19296749 -70207804 - AluSx SINE Alu -9 303 1 1105 151 143 59 chr17 19297438 19297710 -70206843 - AluSq SINE Alu -8 295 1 2201 134 36 19 chr17 19297957 19298368 -70206185 + L1MA4 LINE L1 5877 6294 -6 981 170 50 46 chr17 19298381 19298414 -70206139 + L1MB3 LINE L1 5575 5606 -577 2282 80 7 10 chr17 19298414 19298715 -70205838 + AluSp SINE Alu 1 300 -13 981 170 50 46 chr17 19298715 19298899 -70205654 + L1MB3 LINE L1 5606 5793 -390 1732 126 74 66 chr17 19298900 19298981 -70205572 + MER4B LTR ERV1 4 83 -527 2372 97 0 10 chr17 19298981 19299292 -70205261 + AluSq SINE Alu 1 308 -5 1732 126 74 66 chr17 19299292 19299590 -70204963 + MER4B LTR ERV1 83 386 -224 670 87 11 0 chr17 19299585 19299677 -70204876 + MER4A LTR ERV1 572 664 0 * 250 152 0 0 chr17 19299677 19299723 -70204830 + L1MB3 LINE L1 5787 5832 -348 2102 127 11 22 chr17 19299736 19300107 -70204446 + L1MB3 LINE L1 5814 6180 -3 24 0 0 0 chr17 19300109 19300133 -70204420 + AT_rich Low_complexity Low_complexity 1 24 0 544 280 63 11 chr17 19301184 19301359 -70203194 + MIR SINE MIR 77 260 -2 216 229 0 0 chr17 19301748 19301809 -70202744 + T-rich Low_complexity Low_complexity 1 61 0 6462 50 18 35 chr17 19301809 19302662 -70201891 - SVA Other Other 0 1386 549 447 50 8 50 chr17 19302676 19302796 -70201757 - SVA Other Other -592 794 680 25 0 0 0 chr17 19303073 19303098 -70201455 + GC_rich Low_complexity Low_complexity 1 25 0 1201 58 0 44 chr17 19303315 19303521 -70201032 - SVA Other Other -520 866 670 338 211 110 158 chr17 19303551 19303760 -70200793 - MLT1K LTR MaLR -7 581 383 230 331 33 58 chr17 19303806 19303927 -70200626 - MLT1K LTR MaLR -368 220 103 2503 184 56 12 chr17 19304198 19304715 -70199838 + MLT1F LTR MaLR 3 542 0 2097 94 44 4 chr17 19304917 19305192 -70199361 + AluSx SINE Alu 6 291 -21 193 248 339 8 chr17 19306112 19306233 -70198320 - L3 LINE CR1 -103 1474 1314 419 222 19 28 chr17 19307667 19307775 -70196778 + MER5A DNA MER1_type 3 109 -80 1284 234 85 31 chr17 19307931 19308319 -70196234 + MLT1C LTR MaLR 6 414 -53 186 103 0 0 chr17 19308766 19308795 -70195758 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 445 228 26 26 chr17 19308984 19309098 -70195455 + MER5B DNA MER1_type 1 114 -64 422 261 35 0 chr17 19309323 19309438 -70195115 - MIR SINE MIR -117 145 27 2420 92 0 3 chr17 19309492 19309797 -70194756 + AluSq SINE Alu 1 304 -9 1440 241 137 16 chr17 19309899 19310338 -70194215 - L1ME3A LINE L1 -3 6167 5676 336 186 47 23 chr17 19310348 19310434 -70194119 + LTR67 LTR ERVL 469 556 -1 387 172 115 159 chr17 19310440 19310597 -70193956 - MIR SINE MIR -101 161 12 600 235 72 24 chr17 19311496 19311662 -70192891 + MER5A DNA MER1_type 14 187 -2 296 300 67 0 chr17 19311675 19311765 -70192788 - MIR SINE MIR -94 168 73 418 233 0 0 chr17 19311849 19311922 -70192631 - MLT1J LTR MaLR -202 309 237 2225 85 10 7 chr17 19311922 19312229 -70192324 + AluSx SINE Alu 1 308 -4 288 149 0 104 chr17 19312230 19312297 -70192256 + Alu SINE Alu 239 298 -2 818 258 46 12 chr17 19312300 19312540 -70192013 - MLT1J LTR MaLR -263 248 1 274 282 78 49 chr17 19312576 19312718 -70191835 + L2 LINE L2 3136 3281 -32 2018 135 0 13 chr17 19312986 19313298 -70191255 + AluSx SINE Alu 1 308 -4 560 292 51 20 chr17 19314292 19314487 -70190066 + L2 LINE L2 3105 3305 -8 2217 92 3 3 chr17 19315816 19316111 -70188442 - AluSp SINE Alu -18 295 1 2113 84 0 45 chr17 19316864 19317172 -70187381 + AluSg SINE Alu 1 294 -16 2239 82 16 10 chr17 19317711 19318017 -70186536 + AluSg SINE Alu 1 308 -2 325 318 61 20 chr17 19318589 19318737 -70185816 + L1ME4a LINE L1 5595 5748 -373 414 165 16 116 chr17 19318749 19318796 -70185757 - MER58B DNA MER1_type -2085 335 285 2181 92 14 0 chr17 19318796 19319090 -70185463 - AluSg SINE Alu -12 298 1 414 165 16 116 chr17 19319090 19319163 -70185390 - MER58B DNA MER1_type -2135 285 227 405 273 158 44 chr17 19319274 19319310 -70185243 + L1ME4a LINE L1 5789 5819 -302 1831 126 3 18 chr17 19319310 19319619 -70184934 + AluSc SINE Alu 1 305 0 405 273 158 44 chr17 19319619 19319878 -70184675 + L1ME4a LINE L1 5819 6119 -2 221 307 123 34 chr17 19320101 19320280 -70184273 + MIR SINE MIR 67 261 -1 512 133 0 31 chr17 19320299 19320397 -70184156 + (CACCAT)n Simple_repeat Simple_repeat 3 97 0 2072 165 95 32 chr17 19320564 19320716 -70183837 - MSTB LTR MaLR 0 426 285 2068 136 0 0 chr17 19320716 19321010 -70183543 + AluSx SINE Alu 1 294 -18 2072 165 95 32 chr17 19321010 19321257 -70183296 - MSTB LTR MaLR -141 285 2 319 282 100 9 chr17 19321262 19321372 -70183181 + MIR3 SINE MIR 67 186 -22 983 183 46 5 chr17 19322359 19322578 -70181975 - AluJo SINE Alu 0 312 85 352 174 0 43 chr17 19322578 19322647 -70181906 - AluSg/x SINE Alu -52 250 185 2226 98 0 22 chr17 19322754 19323071 -70181482 + AluSq SINE Alu 1 310 -3 862 238 22 2 chr17 19324119 19324346 -70180207 - MIR SINE MIR 0 262 34 1179 189 31 53 chr17 19324690 19324915 -70179638 + MER33 DNA MER1_type 10 227 -2358 1966 130 47 7 chr17 19324915 19325215 -70179338 - AluSx SINE Alu 0 312 1 1179 189 31 53 chr17 19325215 19325311 -70179242 + MER33 DNA MER1_type 227 324 0 288 276 51 0 chr17 19325479 19325577 -70178976 - MIR SINE MIR -148 114 12 227 349 20 7 chr17 19326206 19326317 -70178236 + MIR SINE MIR 76 187 -62 2438 43 3 7 chr17 19327591 19327891 -70176662 + AluSp SINE Alu 1 299 -14 231 260 0 31 chr17 19328234 19328330 -70176223 + (CCG)n Simple_repeat Simple_repeat 2 94 0 334 265 39 0 chr17 19328452 19328554 -70175999 - MIR3 SINE MIR -21 187 82 232 226 81 0 chr17 19328670 19328732 -70175821 + MIR SINE MIR 85 151 -111 1317 145 0 14 chr17 19329127 19329341 -70175212 - AluJb SINE Alu -16 296 86 2147 95 10 3 chr17 19329711 19330007 -70174546 + AluSq SINE Alu 1 298 -15 304 350 0 8 chr17 19330298 19330421 -70174132 + MIR SINE MIR 21 142 -120 335 280 108 0 chr17 19330442 19330570 -70173983 + MIR SINE MIR 44 184 -63 1508 170 91 11 chr17 19330697 19330973 -70173580 + AluJo SINE Alu 14 311 -1 1483 242 120 66 chr17 19331060 19331651 -70172902 + HAL1 LINE L1 265 887 -1620 749 238 24 24 chr17 19331654 19331822 -70172731 + FRAM SINE Alu 1 168 -8 558 272 166 25 chr17 19332617 19333021 -70171532 - L1MC4a LINE L1 -87 6034 5574 429 342 20 10 chr17 19333206 19333408 -70171145 - L1MC4a LINE L1 -1979 5829 5626 586 341 128 49 chr17 19333641 19334209 -70170344 - L1MC4a LINE L1 -861 5285 4673 2250 70 0 13 chr17 19334829 19335129 -70169424 + AluSc SINE Alu 1 296 -13 913 147 0 117 chr17 19336185 19336416 -70168137 - AluSg/x SINE Alu -5 307 104 586 104 229 139 chr17 19336425 19336569 -70167984 - AluSx SINE Alu -150 162 6 390 287 31 21 chr17 19337173 19337380 -70167173 + L1ME4a LINE L1 5475 5681 -460 4372 129 15 127 chr17 19337380 19338920 -70165633 + pTR5 LTR ERV1 755 2606 0 359 362 56 44 chr17 19338959 19339299 -70165254 + L1ME4a LINE L1 5775 6118 -3 2313 79 10 3 chr17 19339760 19340065 -70164488 + AluSp SINE Alu 1 307 -6 24 32 0 0 chr17 19340694 19340725 -70163828 + AT_rich Low_complexity Low_complexity 1 31 0 2134 85 0 36 chr17 19341372 19341679 -70162874 + AluSx SINE Alu 1 296 -16 347 281 44 0 chr17 19342138 19342252 -70162301 - L2 LINE L2 0 3272 3154 201 292 26 44 chr17 19342271 19342384 -70162169 - L2 LINE L2 -26 3246 3136 229 320 118 17 chr17 19344854 19345032 -70159521 - MIR SINE MIR -2 260 65 24 32 0 0 chr17 19345693 19345724 -70158829 + AT_rich Low_complexity Low_complexity 1 31 0 186 43 0 0 chr17 19346515 19346538 -70158015 + (CCG)n Simple_repeat Simple_repeat 1 23 0 203 59 0 29 chr17 19347589 19347623 -70156930 + (GGCTG)n Simple_repeat Simple_repeat 4 36 0 201 294 0 0 chr17 19347701 19347769 -70156784 + (CCCCG)n Simple_repeat Simple_repeat 3 70 0 204 254 17 0 chr17 19349408 19349467 -70155086 + MER91A DNA MER1_type 14 73 -123 1099 111 0 0 chr17 19351542 19351695 -70152858 - AluSg/x SINE Alu -38 272 120 427 203 116 14 chr17 19351696 19351834 -70152719 + L2 LINE L2 2926 3077 -236 2303 71 3 13 chr17 19351970 19352281 -70152272 - AluSc SINE Alu -1 308 1 425 333 104 3 chr17 19352349 19352689 -70151864 - L1ME3 LINE L1 -12 6150 5733 2170 101 0 16 chr17 19352914 19353232 -70151321 + AluSq SINE Alu 1 313 0 2401 229 33 33 chr17 19353244 19353881 -70150672 + L1MB8 LINE L1 5540 6176 -2 198 286 29 57 chr17 19354395 19354500 -70150053 + L2 LINE L2 2932 3033 -239 343 93 0 19 chr17 19354699 19354753 -70149800 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 207 0 0 0 chr17 19355526 19355549 -70149004 + (CTGGGG)n Simple_repeat Simple_repeat 6 28 0 256 100 20 20 chr17 19358510 19358560 -70145993 + (GGGA)n Simple_repeat Simple_repeat 4 53 0 648 293 39 14 chr17 19360275 19360483 -70144070 + MER58 DNA MER1_type 56 268 -73 195 186 0 0 chr17 19363092 19363135 -70141418 + C-rich Low_complexity Low_complexity 6 48 0 434 313 42 6 chr17 19364146 19364312 -70140241 - Charlie8 DNA MER1_type -2244 173 2 2033 110 48 0 chr17 19364618 19364908 -70139645 + AluSx SINE Alu 3 306 -6 426 191 22 0 chr17 19365273 19365409 -70139144 + (TCCA)n Simple_repeat Simple_repeat 1 139 0 229 339 85 25 chr17 19365565 19365683 -70138870 + L2 LINE L2 3143 3267 -5 933 203 286 0 chr17 19368221 19368616 -70135937 + MLT1E1 LTR MaLR 147 654 0 692 237 105 23 chr17 19370089 19370308 -70134245 + L1MB5 LINE L1 5928 6164 -10 184 299 104 0 chr17 19370997 19371074 -70133479 - L2 LINE L2 -787 2527 2443 253 302 38 38 chr17 19371700 19371806 -70132747 + MIR SINE MIR 36 141 -121 2272 63 0 11 chr17 19373129 19373415 -70131138 - AluSx SINE Alu -29 283 1 2269 201 55 72 chr17 19375397 19376032 -70128521 - L1MB7 LINE L1 -95 6089 5465 1191 204 134 19 chr17 19376032 19376301 -70128252 + AluJo SINE Alu 3 302 0 2269 201 55 72 chr17 19376301 19376358 -70128195 - L1MB7 LINE L1 -719 5465 5409 2341 88 3 0 chr17 19376376 19376681 -70127872 + AluSc SINE Alu 1 306 -3 251 314 70 26 chr17 19377226 19377261 -70127292 - MER53 DNA DNA -26 163 131 2101 101 0 4 chr17 19377261 19377539 -70127014 + AluSg SINE Alu 1 277 -33 194 0 39 0 chr17 19377541 19377567 -70126986 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 251 314 70 26 chr17 19377567 19377684 -70126869 - MER53 DNA DNA -58 131 1 186 254 102 0 chr17 19378075 19378134 -70126419 + L2 LINE L2 3127 3191 -81 2366 73 3 0 chr17 19378580 19378883 -70125670 - AluSp SINE Alu -7 306 3 668 276 33 38 chr17 19378988 19379198 -70125355 + MIR SINE MIR 25 233 -29 606 292 51 36 chr17 19381350 19381686 -70122867 + L1MC4a LINE L1 5700 6040 -1768 2137 114 10 0 chr17 19381762 19382068 -70122485 + AluSx SINE Alu 1 309 -3 476 333 123 35 chr17 19382113 19382431 -70122122 + L1MC4a LINE L1 6277 6622 -1186 1350 81 0 0 chr17 19382437 19382610 -70121943 + AluSg/x SINE Alu 127 299 -11 487 228 51 30 chr17 19382633 19382836 -70121717 + L1MC5 LINE L1 6673 6978 -1064 954 239 14 40 chr17 19383002 19383618 -70120935 + L1M4 LINE L1 4651 5333 -830 * 1836 207 49 36 chr17 19383614 19384294 -70120259 + L1ME2 LINE L1 4013 4683 -1481 2133 125 3 0 chr17 19384294 19384599 -70119954 + AluSx SINE Alu 1 306 -6 1836 207 49 36 chr17 19384599 19385277 -70119276 + L1ME2 LINE L1 4683 5351 -813 2147 108 20 3 chr17 19385277 19385574 -70118979 - AluSx SINE Alu -10 302 1 1836 207 49 36 chr17 19385574 19386095 -70118458 + L1ME2 LINE L1 5351 6096 -68 1469 156 53 32 chr17 19386095 19386378 -70118175 + AluJo SINE Alu 1 289 -23 1836 207 49 36 chr17 19386378 19386439 -70118114 + L1ME2 LINE L1 6096 6155 -9 1880 118 44 0 chr17 19386444 19386757 -70117796 - AluSx SINE Alu 0 325 1 524 181 45 196 chr17 19386766 19386834 -70117719 + L1MC5 LINE L1 7640 7717 -244 2201 108 3 0 chr17 19386834 19387131 -70117422 + AluSg SINE Alu 1 298 -12 524 181 45 196 chr17 19387131 19387399 -70117154 + L1MC5 LINE L1 7717 7925 -36 250 331 74 16 chr17 19387408 19387529 -70117024 + MIR SINE MIR 55 182 -80 216 333 287 0 chr17 19387678 19387852 -70116701 - MIR SINE MIR -6 256 33 230 191 16 16 chr17 19388964 19389027 -70115526 + (CAGCC)n Simple_repeat Simple_repeat 1 63 0 1378 162 0 0 chr17 19389904 19390120 -70114433 + AluJo SINE Alu 86 301 -11 820 180 0 0 chr17 19390684 19390823 -70113730 - FLAM_C SINE Alu 0 143 5 473 282 163 28 chr17 19390827 19391146 -70113407 - L1ME2 LINE L1 -56 6108 5747 201 191 0 48 chr17 19392411 19392453 -70112100 + L2 LINE L2 3229 3268 -4 182 318 32 0 chr17 19393212 19393275 -70111278 - MIR SINE MIR -108 154 90 2314 109 0 0 chr17 19393516 19393827 -70110726 - AluSx SINE Alu -1 311 1 246 311 0 75 chr17 19394229 19394335 -70110218 - MIR SINE MIR -47 215 118 308 176 95 14 chr17 19394586 19394660 -70109893 + MER5A DNA MER1_type 14 93 -96 2076 133 0 0 chr17 19395115 19395409 -70109144 - AluSq SINE Alu -19 294 1 298 301 66 7 chr17 19395677 19395813 -70108740 - MIR SINE MIR -62 200 57 208 413 10 20 chr17 19395765 19395816 -70108737 + MIR3 SINE MIR 7 57 -151 * 2220 78 58 0 chr17 19395816 19396110 -70108443 - AluSq SINE Alu -2 311 1 208 413 10 20 chr17 19396110 19396259 -70108294 + MIR3 SINE MIR 57 205 -3 249 346 19 0 chr17 19399025 19399132 -70105421 - L2 LINE L2 -238 3034 2926 372 59 0 0 chr17 19399193 19399244 -70105309 + (TCC)n Simple_repeat Simple_repeat 3 53 0 2275 69 14 0 chr17 19400100 19400391 -70104162 - AluSp SINE Alu -18 295 1 1503 162 33 53 chr17 19400567 19400729 -70103824 - AluJo SINE Alu -16 296 132 186 43 0 0 chr17 19400729 19400752 -70103801 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2155 83 0 0 chr17 19400752 19401018 -70103535 - AluSg SINE Alu -28 282 17 1503 162 33 53 chr17 19401018 19401156 -70103397 - AluJo SINE Alu -178 134 1 439 287 23 0 chr17 19401172 19401301 -70103252 - L1MD3 LINE L1 -11 7984 7853 1896 198 100 0 chr17 19402059 19402499 -70102054 - MER6 DNA MER2_type -350 515 32 233 324 36 9 chr17 19402525 19402636 -70101917 + L1MC/D LINE L1 5654 5767 -2041 1695 91 5 0 chr17 19403467 19403688 -70100865 + AluSx SINE Alu 1 222 -90 1388 82 0 0 chr17 19403688 19403870 -70100683 + AluSg/x SINE Alu 111 292 -18 2259 103 0 6 chr17 19406150 19406462 -70098091 - AluSx SINE Alu -2 310 1 541 316 13 0 chr17 19406598 19406756 -70097797 - MIR SINE MIR -39 223 64 180 276 40 26 chr17 19407523 19407599 -70096954 - L2 LINE L2 -15 3257 3181 2194 112 0 0 chr17 19407925 19408220 -70096333 - AluSx SINE Alu -17 295 1 257 284 0 15 chr17 19409131 19409198 -70095355 + L2 LINE L2 3206 3271 -1 1489 176 39 20 chr17 19409606 19409723 -70094830 + AluJo SINE Alu 1 114 -198 252 59 0 0 chr17 19409723 19409757 -70094796 + (CA)n Simple_repeat Simple_repeat 1 34 0 1489 176 39 20 chr17 19409757 19409771 -70094782 + AluJo SINE Alu 114 126 -186 2264 112 0 3 chr17 19409771 19410083 -70094470 + AluSq SINE Alu 1 311 -2 1489 176 39 20 chr17 19410083 19410256 -70094297 + AluJo SINE Alu 126 312 0 285 269 13 13 chr17 19410634 19410712 -70093841 - MIR SINE MIR -59 149 72 354 241 161 0 chr17 19410863 19410975 -70093578 - MIR SINE MIR -109 153 24 264 331 95 41 chr17 19411289 19411458 -70093095 - MIR3 SINE MIR -13 195 18 222 366 90 0 chr17 19412735 19412869 -70091684 - MIR SINE MIR -6 256 111 220 351 14 0 chr17 19413178 19413252 -70091301 - MIR SINE MIR -124 138 64 2118 129 7 0 chr17 19414075 19414377 -70090176 + AluSx SINE Alu 1 304 -8 245 267 92 23 chr17 19415947 19416078 -70088475 - MIR3 SINE MIR -12 196 57 333 109 0 0 chr17 19419567 19419622 -70084931 + (CA)n Simple_repeat Simple_repeat 2 56 0 310 282 126 0 chr17 19420048 19420151 -70084402 - MIR3 SINE MIR -8 200 85 237 132 0 0 chr17 19420364 19420402 -70084151 + (TCC)n Simple_repeat Simple_repeat 1 38 0 321 204 34 23 chr17 19420606 19420694 -70083859 + MER81 DNA DNA 1 89 -25 190 321 19 0 chr17 19421639 19421692 -70082861 - L2 LINE L2 -11 3261 3208 397 268 63 0 chr17 19421915 19422042 -70082511 + MER20 DNA MER1_type 27 161 -58 268 264 0 0 chr17 19422739 19422792 -70081761 + L2 LINE L2 3219 3271 -1 545 255 240 19 chr17 19423196 19423244 -70081309 + L2 LINE L2 2245 2281 -1032 1667 177 33 3 chr17 19423244 19423544 -70081009 - AluJb SINE Alu -3 309 1 545 255 240 19 chr17 19423544 19424145 -70080408 + L2 LINE L2 2281 3059 -254 230 278 237 0 chr17 19424293 19424390 -70080163 + MIR SINE MIR 106 225 -37 2308 95 0 0 chr17 19424451 19424747 -70079806 + AluSx SINE Alu 1 296 -16 1874 118 61 17 chr17 19424747 19425044 -70079509 + AluSg SINE Alu 1 310 0 999 194 45 0 chr17 19425070 19425271 -70079282 - MER2 DNA MER2_type -135 210 1 1652 141 0 0 chr17 19425326 19425575 -70078978 - AluJb SINE Alu -12 300 52 189 0 0 0 chr17 19425789 19425810 -70078743 + (A)n Simple_repeat Simple_repeat 1 21 0 2379 88 0 3 chr17 19425858 19426165 -70078388 - AluSx SINE Alu -6 306 1 988 228 186 42 chr17 19426554 19426984 -70077569 - MLT1D LTR MaLR -7 498 7 249 265 31 0 chr17 19428908 19429012 -70075541 + L1ME LINE L1 5355 5459 -703 2583 37 0 0 chr17 19429279 19429578 -70074975 + AluY SINE Alu 1 299 -12 736 85 0 0 chr17 19429717 19429811 -70074742 - AluJo/FRAM SINE Alu -16 296 203 1487 115 115 4 chr17 19429811 19430046 -70074507 + AluJo SINE Alu 35 295 -17 33 0 0 0 chr17 19430046 19430079 -70074474 + AT_rich Low_complexity Low_complexity 1 33 0 34 60 0 24 chr17 19430131 19430174 -70074379 + AT_rich Low_complexity Low_complexity 1 43 -39 846 73 0 18 chr17 19430174 19430283 -70074270 + U6 snRNA snRNA 1 107 0 1493 72 16 0 chr17 19430283 19430477 -70074076 + L1PA7 LINE L1 5953 6149 -5 34 60 0 24 chr17 19430477 19430516 -70074037 + AT_rich Low_complexity Low_complexity 41 82 0 2236 97 10 0 chr17 19430939 19431239 -70073314 + AluSx SINE Alu 1 303 -9 198 103 0 0 chr17 19431623 19431652 -70072901 + (GGGGA)n Simple_repeat Simple_repeat 4 32 0 2120 96 3 0 chr17 19431761 19432043 -70072510 + AluSg SINE Alu 21 303 -7 2259 103 0 0 chr17 19434325 19434626 -70069927 + AluSg SINE Alu 1 301 -9 2185 102 3 3 chr17 19434637 19434942 -70069611 + AluSq SINE Alu 1 305 -8 218 293 83 45 chr17 19435036 19435169 -70069384 + MIR SINE MIR 15 152 -110 2450 68 0 7 chr17 19435695 19436004 -70068549 - AluY SINE Alu -4 307 1 816 172 0 21 chr17 19436008 19436153 -70068400 - AluJb SINE Alu -170 142 1 297 369 60 0 chr17 19436356 19436524 -70068029 + MIR SINE MIR 81 258 -4 2324 94 0 0 chr17 19436599 19436908 -70067645 + AluSx SINE Alu 1 309 -3 386 217 22 0 chr17 19436920 19437012 -70067541 + L1M4 LINE L1 2482 2575 -3571 2376 57 3 7 chr17 19437344 19437642 -70066911 + AluY SINE Alu 1 297 -14 1150 56 25 0 chr17 19437682 19437843 -70066710 + (GAAA)n Simple_repeat Simple_repeat 4 168 0 2148 259 139 17 chr17 19437950 19438264 -70066289 + L1M4 LINE L1 2711 2985 -3161 2270 119 0 0 chr17 19438264 19438576 -70065977 + AluSx SINE Alu 1 312 0 2148 259 139 17 chr17 19438576 19439123 -70065430 + L1M4 LINE L1 2985 3733 -2413 1745 123 41 38 chr17 19439123 19439247 -70065306 + AluSx SINE Alu 1 123 -189 216 0 0 0 chr17 19439247 19439271 -70065282 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1745 123 41 38 chr17 19439271 19439439 -70065114 + AluSx SINE Alu 123 294 -18 2148 259 139 17 chr17 19439439 19439655 -70064898 + L1M4 LINE L1 3733 3921 -2225 2236 100 0 3 chr17 19440504 19440805 -70063748 - AluSp SINE Alu -13 300 1 25 0 0 0 chr17 19440815 19440840 -70063713 + AT_rich Low_complexity Low_complexity 1 25 0 322 167 26 135 chr17 19440981 19441137 -70063416 + Charlie5 DNA MER1_type 2445 2583 -29 231 278 65 19 chr17 19441668 19441776 -70062777 + L1ME3A LINE L1 6053 6165 -5 345 291 299 11 chr17 19443783 19444157 -70060396 - L2 LINE L2 -1 3312 2831 2191 92 3 0 chr17 19444187 19444481 -70060072 + AluSx SINE Alu 1 295 -17 1952 89 0 0 chr17 19445324 19445571 -70058982 + AluSg SINE Alu 13 259 -51 2252 88 14 0 chr17 19445573 19445868 -70058685 + AluSg SINE Alu 1 299 -11 507 354 95 29 chr17 19445915 19446231 -70058322 - L3 LINE CR1 -3 1574 1238 223 264 149 0 chr17 19446471 19446558 -70057995 + MIR SINE MIR 152 251 -11 1824 147 3 29 chr17 19446561 19446873 -70057680 + AluJo SINE Alu 1 304 -8 502 296 98 53 chr17 19447497 19447819 -70056734 + L2 LINE L2 2883 3222 -91 2226 105 0 3 chr17 19447819 19448123 -70056430 - AluSx SINE Alu -9 303 1 502 296 98 53 chr17 19448123 19448138 -70056415 + L2 LINE L2 3222 3235 -78 556 167 0 0 chr17 19448153 19448237 -70056316 - FRAM/FAM SINE Alu -95 81 1 2134 98 3 20 chr17 19448248 19448545 -70056008 - AluSx SINE Alu -20 292 1 342 250 73 10 chr17 19448546 19448642 -70055911 + L2 LINE L2 3208 3309 -4 334 225 79 11 chr17 19448647 19448736 -70055817 + MIR3 SINE MIR 64 158 -50 2150 114 3 3 chr17 19448784 19449082 -70055471 + AluSq SINE Alu 1 298 -15 1867 145 3 3 chr17 19449093 19449418 -70055135 + AluJb SINE Alu 1 325 0 549 279 84 11 chr17 19449431 19449621 -70054932 - MIR SINE MIR 0 262 59 414 229 236 0 chr17 19449650 19449807 -70054746 + L2 LINE L2 2782 2975 -339 409 224 47 94 chr17 19449896 19449983 -70054570 + L1MEc LINE L1 1541 1631 -4765 2158 84 24 7 chr17 19449983 19450279 -70054274 + AluSc SINE Alu 1 301 -8 409 224 47 94 chr17 19450279 19450290 -70054263 + L1MEc LINE L1 1631 1641 -4755 2311 108 0 0 chr17 19450290 19450597 -70053956 + AluSx SINE Alu 1 307 -5 409 224 47 94 chr17 19450597 19450751 -70053802 + L1MEc LINE L1 1641 1782 -4614 564 267 128 0 chr17 19450833 19451028 -70053525 + L1MEc LINE L1 2628 2847 -3368 1237 74 51 0 chr17 19451036 19451211 -70053342 - AluSp SINE Alu -16 297 114 686 196 0 23 chr17 19451250 19451383 -70053170 - FLAM_C SINE Alu -3 130 1 1853 149 14 10 chr17 19451810 19452105 -70052448 + AluJb SINE Alu 1 296 -16 331 207 81 46 chr17 19452105 19452192 -70052361 - L1M4 LINE L1 -3273 2873 2784 2092 103 30 0 chr17 19452192 19452493 -70052060 + AluSx SINE Alu 1 310 -2 2015 79 65 0 chr17 19452498 19452777 -70051776 + AluSp SINE Alu 1 297 -16 2219 87 0 3 chr17 19453192 19453512 -70051041 + AluY SINE Alu 1 311 0 1986 131 0 17 chr17 19453609 19453745 -70050808 + AluSx SINE Alu 2 139 -173 2204 108 0 13 chr17 19453745 19454095 -70050458 + AluSc SINE Alu 1 309 0 1986 131 0 17 chr17 19454095 19454256 -70050297 + AluSx SINE Alu 139 294 -18 1332 234 130 25 chr17 19454258 19454772 -70049781 - L1MC4 LINE L1 0 8042 7475 221 303 15 0 chr17 19455279 19455345 -70049208 + MIR3 SINE MIR 104 170 -38 239 279 29 0 chr17 19455374 19455442 -70049111 - MER20B DNA MER1_type -605 178 109 277 310 142 9 chr17 19455610 19455723 -70048830 - MIR SINE MIR -119 143 16 585 308 76 0 chr17 19456230 19456428 -70048125 + MIR SINE MIR 47 259 -3 257 330 6 6 chr17 19456860 19457036 -70047517 + (TG)n Simple_repeat Simple_repeat 2 177 0 706 102 92 0 chr17 19457124 19457222 -70047331 - AluSq/x SINE Alu -204 109 3 2519 144 34 32 chr17 19457224 19457758 -70046795 - L1MB7 LINE L1 -357 5827 5293 247 295 36 36 chr17 19458515 19458627 -70045926 + L2 LINE L2 2715 2826 -488 218 180 90 90 chr17 19458638 19458727 -70045826 - L2 LINE L2 -2 3270 3182 216 345 94 34 chr17 19458804 19459039 -70045514 + L2 LINE L2 2852 3100 -172 2210 125 0 0 chr17 19459079 19459382 -70045171 - AluSx SINE Alu -9 303 1 945 143 17 122 chr17 19459566 19459586 -70044967 + MER20 DNA MER1_type 4 25 -194 2190 93 0 3 chr17 19459586 19459876 -70044677 - AluSg SINE Alu -14 296 8 945 143 17 122 chr17 19459876 19459891 -70044662 + MER20 DNA MER1_type 25 40 -179 297 0 0 0 chr17 19459891 19459924 -70044629 + (CA)n Simple_repeat Simple_repeat 1 33 0 945 143 17 122 chr17 19459924 19460047 -70044506 + MER20 DNA MER1_type 40 133 -86 2429 81 0 0 chr17 19460047 19460355 -70044198 + AluY SINE Alu 1 308 -3 945 143 17 122 chr17 19460355 19460431 -70044122 + MER20 DNA MER1_type 133 215 -4 954 255 95 26 chr17 19460809 19461189 -70043364 + MLT1J2 LTR MaLR 44 449 -1 207 349 66 0 chr17 19461461 19461567 -70042986 + L2 LINE L2 3151 3263 -9 669 181 0 9 chr17 19461630 19461746 -70042807 - AluJo/FRAM SINE Alu -15 297 183 1267 164 91 17 chr17 19461749 19461981 -70042572 - AluJo SINE Alu -59 253 5 583 290 79 38 chr17 19462171 19462461 -70042092 - MLT1L LTR MaLR -180 435 134 8582 44 12 0 chr17 19462470 19463427 -70041126 - LTR5 LTR ERVK 0 969 1 395 338 19 7 chr17 19464071 19464225 -70040328 - MIR SINE MIR 0 262 107 550 277 7 14 chr17 19464301 19464449 -70040104 + MIR SINE MIR 105 251 -11 296 211 42 42 chr17 19464449 19464544 -70040009 - MIR SINE MIR -104 158 64 402 82 0 16 chr17 19464545 19464599 -70039954 + Alu SINE Alu 1 55 -253 2239 76 35 10 chr17 19464599 19464888 -70039665 + AluSq SINE Alu 11 306 -7 859 253 37 72 chr17 19465369 19465824 -70038729 + L1MC5 LINE L1 7221 7659 -302 1679 182 34 0 chr17 19465825 19466116 -70038437 - AluJb SINE Alu -11 301 1 935 201 5 27 chr17 19466137 19466321 -70038232 + AluJo SINE Alu 117 296 -16 2321 101 16 3 chr17 19466321 19466629 -70037924 + AluSq SINE Alu 1 312 -1 4862 111 4 21 chr17 19466662 19467098 -70037455 - L1PB3 LINE L1 -38 6116 5674 2150 143 7 0 chr17 19467098 19467406 -70037147 - AluSx SINE Alu -2 310 1 4862 111 4 21 chr17 19467406 19467490 -70037063 - L1PB3 LINE L1 -480 5674 5590 2394 97 0 3 chr17 19467490 19467801 -70036752 - AluSp SINE Alu -3 310 1 4862 111 4 21 chr17 19467801 19468042 -70036511 - L1PB3 LINE L1 -564 5590 5367 4802 120 6 45 chr17 19468050 19468549 -70036004 - L1MC1 LINE L1 -13 6320 5803 2161 71 43 11 chr17 19468549 19468829 -70035724 - AluSx SINE Alu -7 305 17 4802 120 6 45 chr17 19468829 19468850 -70035703 - L1MC1 LINE L1 -530 5803 5783 2233 107 4 0 chr17 19468850 19469155 -70035398 - AluSp SINE Alu 0 306 1 4802 120 6 45 chr17 19469155 19469463 -70035090 - L1MC1 LINE L1 -550 5783 5522 644 113 15 88 chr17 19469463 19469494 -70035059 + L1MCa LINE L1 2223 2255 -4171 727 106 68 68 chr17 19469494 19469626 -70034927 + FLAM_C SINE Alu 1 132 -1 644 113 15 88 chr17 19469626 19469687 -70034866 + L1MCa LINE L1 2255 2319 -4107 2361 101 0 0 chr17 19469687 19469975 -70034578 + AluSg SINE Alu 1 288 -22 644 113 15 88 chr17 19469975 19470085 -70034468 + L1MCa LINE L1 2319 2411 -4015 2305 116 0 0 chr17 19470185 19470488 -70034065 - AluSx SINE Alu -9 303 1 397 167 0 0 chr17 19470488 19470570 -70033983 + L1MCa LINE L1 2415 2478 -3948 2405 106 3 0 chr17 19470570 19470882 -70033671 + AluSp SINE Alu 1 313 0 197 62 0 31 chr17 19470890 19470922 -70033631 + (GAAAA)n Simple_repeat Simple_repeat 2 32 0 1512 268 13 15 chr17 19470948 19471492 -70033061 + L1MCa LINE L1 2513 3056 -3370 2059 108 59 0 chr17 19471492 19471779 -70032774 + AluSq SINE Alu 1 304 -9 1512 268 13 15 chr17 19471779 19471803 -70032750 + L1MCa LINE L1 3056 3079 -3347 1922 182 3 6 chr17 19471803 19472116 -70032437 + AluJb SINE Alu 1 312 0 1512 268 13 15 chr17 19472116 19472206 -70032347 + L1MCa LINE L1 3079 3320 -3106 2065 153 0 0 chr17 19472208 19472503 -70032050 + AluSx SINE Alu 1 295 -17 231 43 106 0 chr17 19472503 19472550 -70032003 + GA-rich Low_complexity Low_complexity 1 52 0 434 216 155 0 chr17 19472552 19472668 -70031885 + L1MCa LINE L1 3309 3442 -2984 2381 107 0 0 chr17 19472685 19472994 -70031559 + AluSx SINE Alu 1 309 -3 638 135 0 35 chr17 19472998 19473139 -70031414 + (GGAGAA)n Simple_repeat Simple_repeat 4 139 0 210 362 28 35 chr17 19473370 19473511 -70031042 - L2 LINE L2 -51 3262 3123 1179 145 92 46 chr17 19473822 19474043 -70030510 - L1MB5 LINE L1 0 6174 5965 2342 122 0 0 chr17 19474043 19474355 -70030198 - AluSx SINE Alu 0 312 1 1760 149 45 14 chr17 19474357 19474646 -70029907 - AluJb SINE Alu -14 298 1 1179 145 92 46 chr17 19474646 19474704 -70029849 - L1MB5 LINE L1 -209 5965 5879 1995 106 64 0 chr17 19474723 19475011 -70029542 - AluSx SINE Alu 0 305 1 2232 122 3 0 chr17 19475011 19475314 -70029239 - AluSx SINE Alu -8 304 1 269 280 79 9 chr17 19475379 19475593 -70028960 - L2 LINE L2 -706 2608 2380 2234 97 19 16 chr17 19475880 19476191 -70028362 + AluSx SINE Alu 1 312 0 357 346 31 15 chr17 19476245 19476375 -70028178 - MER91C DNA MER1_type 0 140 9 457 224 26 72 chr17 19476905 19477057 -70027496 + MIR3 SINE MIR 27 171 -37 234 136 0 0 chr17 19477128 19477172 -70027381 + (CA)n Simple_repeat Simple_repeat 2 45 0 2336 85 7 16 chr17 19477183 19477488 -70027065 - AluSq SINE Alu -5 308 7 246 319 44 0 chr17 19478337 19478428 -70026125 - MIR3 SINE MIR -21 187 93 182 262 0 0 chr17 19478483 19478525 -70026028 + MIR SINE MIR 112 153 -109 1294 205 6 116 chr17 19478929 19479113 -70025440 - AluSp SINE Alu -5 308 105 2312 104 0 13 chr17 19479113 19479420 -70025133 - AluSx SINE Alu -9 303 1 1294 205 6 116 chr17 19479420 19479432 -70025121 - AluSp SINE Alu -208 105 93 2327 108 0 0 chr17 19479432 19479727 -70024826 - AluSg SINE Alu -15 295 1 1294 205 6 116 chr17 19479727 19479875 -70024678 - AluSp SINE Alu -220 93 1 2361 75 6 43 chr17 19479901 19480223 -70024330 + AluSg SINE Alu 1 310 0 332 392 18 18 chr17 19480482 19480653 -70023900 - L1M4 LINE L1 -744 5402 5232 2045 185 28 59 chr17 19480653 19480683 -70023870 - L1MB5 LINE L1 -14 6160 6131 1866 126 81 3 chr17 19480683 19480968 -70023585 - AluJo SINE Alu -5 307 1 2045 185 28 59 chr17 19480968 19481231 -70023322 - L1MB5 LINE L1 -43 6131 5887 2473 78 0 7 chr17 19481231 19481540 -70023013 - AluSq SINE Alu -5 308 2 2045 185 28 59 chr17 19481540 19481753 -70022800 - L1MB5 LINE L1 -287 5887 5669 2167 146 0 0 chr17 19481753 19482062 -70022491 - AluSx SINE Alu -3 309 1 1225 178 20 24 chr17 19482070 19482170 -70022383 - L1MB5 LINE L1 -657 5517 5418 2168 104 17 3 chr17 19482170 19482467 -70022086 - AluSx SINE Alu -11 301 1 1225 178 20 24 chr17 19482467 19482700 -70021853 - L1MB5 LINE L1 -756 5418 5184 1849 156 3 36 chr17 19483062 19483201 -70021352 + AluSg SINE Alu 1 143 -167 1987 130 0 10 chr17 19483201 19483493 -70021060 + AluSx SINE Alu 5 293 -19 1849 156 3 36 chr17 19483493 19483655 -70020898 + AluSg SINE Alu 143 292 -18 3151 147 103 7 chr17 19483762 19484825 -70019728 - LTR12 LTR ERV1 0 2427 1 2009 135 7 4 chr17 19485702 19486016 -70018537 - AluSq SINE Alu 0 315 1 443 293 33 0 chr17 19486064 19486214 -70018339 - L2 LINE L2 -240 3073 2919 1969 144 3 10 chr17 19486591 19486890 -70017663 - AluJb SINE Alu -15 297 1 181 209 0 119 chr17 19486929 19486996 -70017557 - L2 LINE L2 0 3272 3214 235 231 19 0 chr17 19487085 19487137 -70017416 + MLT1D LTR MaLR 10 62 -443 300 122 20 0 chr17 19487143 19487192 -70017361 + MSTC LTR MaLR 1 50 -346 1929 64 64 24 chr17 19487193 19487443 -70017110 + AluY SINE Alu 40 299 -12 818 141 0 25 chr17 19487454 19487575 -70016978 + FLAM_C SINE Alu 1 118 -25 1046 172 88 78 chr17 19487599 19487919 -70016634 + MSTC LTR MaLR 52 428 0 5542 213 92 47 chr17 19487921 19488592 -70015961 + MSTC-int LTR MaLR 2 641 -1094 2225 103 0 4 chr17 19488592 19488909 -70015644 + AluSg SINE Alu 1 316 0 5542 213 92 47 chr17 19488909 19489542 -70015011 + MSTC-int LTR MaLR 641 1401 -334 2222 76 0 0 chr17 19489542 19489804 -70014749 + AluSc SINE Alu 3 264 -45 5542 213 92 47 chr17 19489804 19490154 -70014399 + MSTC-int LTR MaLR 1401 1734 -1 862 254 91 53 chr17 19490155 19490319 -70014234 + MSTD LTR MaLR 1 157 -239 1621 175 7 34 chr17 19490319 19490616 -70013937 + AluJb SINE Alu 1 289 -23 862 254 91 53 chr17 19490616 19490825 -70013728 + MSTD LTR MaLR 157 388 -8 1256 191 73 73 chr17 19490829 19490962 -70013591 + MLT1D LTR MaLR 66 198 -307 2281 110 0 13 chr17 19490962 19491098 -70013455 + AluSq SINE Alu 1 137 -176 2480 87 0 0 chr17 19491098 19491396 -70013157 + AluSg SINE Alu 1 298 -12 2281 110 0 13 chr17 19491396 19491568 -70012985 + AluSq SINE Alu 137 305 -8 1256 191 73 73 chr17 19491568 19491874 -70012679 + MLT1D LTR MaLR 197 505 0 199 344 96 8 chr17 19491931 19492056 -70012497 + L2 LINE L2 3136 3271 -1 2544 78 0 0 chr17 19492140 19492449 -70012104 + AluY SINE Alu 1 309 -2 1662 110 80 67 chr17 19492613 19492912 -70011641 + AluSx SINE Alu 1 303 -9 290 224 66 0 chr17 19493319 19493395 -70011158 - MIR SINE MIR -68 140 60 269 240 53 0 chr17 19493817 19493892 -70010661 - L3 LINE CR1 -75 1502 1424 442 277 8 8 chr17 19494166 19494285 -70010268 + L2 LINE L2 2943 3061 -252 311 133 150 0 chr17 19494497 19494557 -70009996 - LTR16C LTR ERVL -10 481 413 1798 179 13 19 chr17 19494574 19494886 -70009667 - AluJo SINE Alu 0 312 3 328 125 0 18 chr17 19494890 19494940 -70009613 + MLT1B LTR MaLR 22 70 -320 1137 185 64 54 chr17 19494940 19495039 -70009514 + MER2 DNA MER2_type 2 99 -246 2243 108 0 0 chr17 19495039 19495350 -70009203 + AluSq SINE Alu 1 311 0 1137 185 64 54 chr17 19495350 19495560 -70008993 + MER2 DNA MER2_type 99 317 -28 1367 172 17 92 chr17 19495572 19495921 -70008632 + MLT1B LTR MaLR 68 390 0 254 228 130 0 chr17 19495960 19496052 -70008501 - MIR SINE MIR -68 140 37 196 364 0 0 chr17 19496569 19496635 -70007918 - L2 LINE L2 -218 3054 2989 2822 174 82 62 chr17 19496637 19497011 -70007542 + L1MB5 LINE L1 5432 5797 -377 2072 123 3 7 chr17 19497011 19497326 -70007227 - AluSq SINE Alu 0 313 1 2822 174 82 62 chr17 19497326 19497351 -70007202 + L1MB5 LINE L1 5797 5820 -354 2344 90 3 10 chr17 19497351 19497652 -70006901 + AluSq SINE Alu 1 299 -14 2822 174 82 62 chr17 19497652 19497979 -70006574 + L1MB5 LINE L1 5820 6174 0 2297 85 16 31 chr17 19497990 19498307 -70006246 + AluSx SINE Alu 1 312 0 238 302 19 38 chr17 19498643 19498802 -70005751 + G-rich Low_complexity Low_complexity 6 161 0 841 278 48 0 chr17 19499173 19499400 -70005153 + MIR SINE MIR 25 262 0 326 290 0 10 chr17 19499427 19499527 -70005026 - MER5A DNA MER1_type -28 161 63 1968 165 0 0 chr17 19499529 19499820 -70004733 - AluJb SINE Alu -17 295 5 208 325 34 45 chr17 19499951 19500219 -70004334 - L2 LINE L2 -1219 2095 1831 1888 204 19 0 chr17 19500229 19500606 -70003947 + MLT1B LTR MaLR 1 384 -6 303 222 69 0 chr17 19500653 19500725 -70003828 + HAL1 LINE L1 850 926 -1581 2217 128 0 0 chr17 19500731 19501036 -70003517 - AluSq SINE Alu -8 305 1 1584 173 0 64 chr17 19501146 19501458 -70003095 + AluJo SINE Alu 1 292 -20 478 167 37 9 chr17 19501475 19501583 -70002970 + HAL1 LINE L1 964 1074 -1433 37 52 0 0 chr17 19501588 19501646 -70002907 + AT_rich Low_complexity Low_complexity 1 58 0 2192 249 86 66 chr17 19501700 19501743 -70002810 + HAL1 LINE L1 1088 1129 -1378 2222 131 10 0 chr17 19501743 19502049 -70002504 + AluSg SINE Alu 1 309 -1 2192 249 86 66 chr17 19502049 19502183 -70002370 + HAL1 LINE L1 1129 1259 -1248 2505 81 0 3 chr17 19502183 19502490 -70002063 + AluY SINE Alu 1 306 -5 2192 249 86 66 chr17 19502490 19502801 -70001752 + HAL1 LINE L1 1259 1562 -945 1958 144 20 34 chr17 19502801 19503119 -70001434 + MER7A DNA MER2_type 1 314 -2724 2820 10 0 0 chr17 19503119 19503438 -70001115 - AluY SINE Alu 0 319 1 1958 144 20 34 chr17 19503438 19503471 -70001082 + MER7A DNA MER2_type 314 346 0 2192 249 86 66 chr17 19503471 19503905 -70000648 + HAL1 LINE L1 1562 2038 -469 252 0 0 0 chr17 19503905 19503933 -70000620 + (CAAAC)n Simple_repeat Simple_repeat 3 30 0 2192 249 86 66 chr17 19503933 19504061 -70000492 + HAL1 LINE L1 2038 2162 -345 310 335 0 66 chr17 19504061 19504160 -70000393 - LTR16B LTR ERVL 0 464 377 2396 94 10 3 chr17 19504160 19504468 -70000085 + AluSq SINE Alu 1 310 -3 310 335 0 66 chr17 19504468 19504520 -70000033 - LTR16B LTR ERVL -87 377 323 1320 148 43 4 chr17 19504664 19504894 -69999659 - MSTB1 LTR MaLR -15 417 179 336 176 0 0 chr17 19504897 19504948 -69999605 + Alu SINE Alu 1 51 -252 8163 174 7 25 chr17 19504948 19505750 -69998803 - MST-int LTR MaLR -182 1469 653 2226 109 0 0 chr17 19505750 19506043 -69998510 - AluSx SINE Alu 0 312 20 8163 174 7 25 chr17 19506043 19506367 -69998186 - MST-int LTR MaLR -998 653 375 2043 152 10 0 chr17 19506367 19506670 -69997883 + AluJb SINE Alu 1 306 -6 8163 174 7 25 chr17 19506670 19507035 -69997518 - MST-int LTR MaLR -1276 375 5 461 72 14 0 chr17 19507037 19507106 -69997447 - MSTB LTR MaLR 0 432 363 2259 83 4 0 chr17 19507106 19507382 -69997171 + AluSp SINE Alu 1 277 -36 752 121 13 25 chr17 19507382 19507539 -69997014 + (GAAA)n Simple_repeat Simple_repeat 4 158 0 200 94 0 31 chr17 19507539 19507571 -69996982 + (GGGA)n Simple_repeat Simple_repeat 1 31 0 802 191 31 13 chr17 19507571 19507837 -69996716 - MSTB LTR MaLR -64 362 55 189 0 0 0 chr17 19507849 19507870 -69996683 + (CA)n Simple_repeat Simple_repeat 1 21 0 180 0 0 0 chr17 19507870 19507890 -69996663 + (TG)n Simple_repeat Simple_repeat 2 21 0 2495 46 0 0 chr17 19507904 19508211 -69996342 + AluY SINE Alu 1 307 0 195 69 0 0 chr17 19508213 19508242 -69996311 + (TA)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr17 19508397 19508423 -69996130 + (TA)n Simple_repeat Simple_repeat 2 27 0 2027 159 0 3 chr17 19508423 19508725 -69995828 - AluJo SINE Alu -11 301 1 416 159 0 0 chr17 19508725 19508794 -69995759 - MSTB LTR MaLR -357 69 1 631 213 63 31 chr17 19508803 19509053 -69995500 - MLT1C LTR MaLR 0 467 171 691 117 28 151 chr17 19509058 19509237 -69995316 - FRAM SINE Alu 0 176 20 340 164 148 82 chr17 19509241 19509363 -69995190 - MLT1C LTR MaLR -337 130 1 250 302 35 0 chr17 19509666 19509752 -69994801 + LTR67 LTR ERVL 96 184 -373 1871 124 44 7 chr17 19509862 19510135 -69994418 - AluSx SINE Alu -29 283 1 1815 154 0 11 chr17 19510171 19510450 -69994103 + AluJo SINE Alu 13 288 -24 5674 151 43 18 chr17 19510473 19510724 -69993829 + L1MC1 LINE L1 5082 5325 -1008 690 198 0 0 chr17 19510724 19510850 -69993703 + FLAM_A SINE Alu 4 129 -4 5674 151 43 18 chr17 19510850 19511098 -69993455 + L1MC1 LINE L1 5325 5565 -768 1386 181 23 85 chr17 19511098 19511497 -69993056 + MLT1A2 LTR MaLR 1 374 0 5674 151 43 18 chr17 19511497 19511894 -69992659 + L1MC1 LINE L1 5565 6016 -317 2314 108 3 3 chr17 19511894 19512199 -69992354 + AluSg SINE Alu 1 305 -5 5674 151 43 18 chr17 19512199 19512526 -69992027 + L1MC1 LINE L1 6016 6333 0 649 259 82 27 chr17 19512541 19512835 -69991718 - MLT1I LTR MaLR -65 344 35 306 180 0 0 chr17 19512907 19512968 -69991585 + (CA)n Simple_repeat Simple_repeat 1 61 0 2295 101 0 9 chr17 19513092 19513408 -69991145 + AluSq SINE Alu 1 313 0 1081 258 5 15 chr17 19513589 19513882 -69990671 - L1ME1 LINE L1 -7 6159 5823 2236 95 7 0 chr17 19513882 19514178 -69990375 - AluSp SINE Alu -15 298 1 1081 258 5 15 chr17 19514178 19514274 -69990279 - L1ME1 LINE L1 -343 5823 5728 584 268 197 21 chr17 19514324 19514709 -69989844 + L2 LINE L2 2855 3307 -6 213 226 172 11 chr17 19514770 19514863 -69989690 - MIR SINE MIR -56 152 45 222 225 31 39 chr17 19514927 19515056 -69989497 + (CA)n Simple_repeat Simple_repeat 2 129 0 463 315 0 35 chr17 19515404 19515631 -69988922 - MIR SINE MIR -29 233 16 323 316 103 26 chr17 19515736 19515853 -69988700 + L3 LINE CR1 1413 1538 -39 301 248 161 15 chr17 19515910 19516047 -69988506 - MLT1K LTR MaLR -111 477 321 365 350 56 12 chr17 19516198 19516358 -69988195 - MIR SINE MIR -8 254 88 212 243 68 27 chr17 19516558 19516632 -69987921 + MIR SINE MIR 74 150 -58 2010 116 0 4 chr17 19516782 19517057 -69987496 + AluSg SINE Alu 1 274 -36 189 0 0 0 chr17 19517065 19517086 -69987467 + (CA)n Simple_repeat Simple_repeat 2 22 0 320 234 0 0 chr17 19517086 19517163 -69987390 + MER3 DNA MER1_type 129 205 -4 2273 97 3 6 chr17 19517448 19517759 -69986794 + AluSx SINE Alu 1 310 -2 1343 263 72 41 chr17 19518164 19518651 -69985902 - MLT1D LTR MaLR -1 504 3 350 340 51 6 chr17 19519001 19519157 -69985396 - MIR SINE MIR -80 182 20 738 268 222 14 chr17 19519851 19520603 -69983950 + L2 LINE L2 2401 3313 0 225 154 0 0 chr17 19520690 19520729 -69983824 + (CA)n Simple_repeat Simple_repeat 1 39 0 279 264 0 0 chr17 19521385 19521514 -69983039 + C-rich Low_complexity Low_complexity 4 132 0 229 317 117 0 chr17 19521885 19522005 -69982548 + MIR SINE MIR 117 250 -12 196 233 0 0 chr17 19522381 19522424 -69982129 + MIR SINE MIR 32 74 -188 709 253 52 34 chr17 19522440 19522673 -69981880 + MLT1D LTR MaLR 9 245 -260 690 162 87 12 chr17 19522674 19522843 -69981710 + MLT1D LTR MaLR 332 505 0 329 284 29 0 chr17 19522848 19522950 -69981603 + MIR SINE MIR 116 220 -42 602 303 48 68 chr17 19522989 19523326 -69981227 - L2 LINE L2 -73 3199 2870 259 291 0 35 chr17 19523605 19523691 -69980862 - MIR SINE MIR 0 262 180 513 274 133 33 chr17 19524295 19524536 -69980017 - L3 LINE CR1 -104 1473 1209 616 228 101 5 chr17 19524556 19524745 -69979808 - MLT1K LTR MaLR -8 580 374 531 289 32 11 chr17 19524813 19525000 -69979553 - MLT1K LTR MaLR -355 233 43 281 252 126 0 chr17 19525006 19525117 -69979436 - MLT1J LTR MaLR 0 511 387 1957 212 7 30 chr17 19525663 19526027 -69978526 - MSTD LTR MaLR 0 396 40 1943 163 0 0 chr17 19526027 19526340 -69978213 + AluSq SINE Alu 1 313 0 1957 212 7 30 chr17 19526340 19526380 -69978173 - MSTD LTR MaLR -356 40 1 1331 165 0 119 chr17 19526695 19527022 -69977531 + AluSc SINE Alu 1 288 -21 242 311 86 43 chr17 19527300 19527468 -69977085 - MIR SINE MIR -51 211 37 234 279 47 4 chr17 19527528 19527600 -69976953 + MIR SINE MIR 88 161 -47 315 267 110 20 chr17 19527718 19527864 -69976689 + MIR3 SINE MIR 4 162 -46 420 20 0 0 chr17 19528141 19528190 -69976363 + (TG)n Simple_repeat Simple_repeat 2 50 0 194 170 0 21 chr17 19528289 19528336 -69976217 + T-rich Low_complexity Low_complexity 4 49 0 1931 154 7 0 chr17 19528338 19528516 -69976037 - AluJb SINE Alu -4 308 126 225 0 0 0 chr17 19528516 19528541 -69976012 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1931 154 7 0 chr17 19528541 19528667 -69975886 - AluJb SINE Alu -186 126 2 314 277 12 0 chr17 19529061 19529144 -69975409 + L2 LINE L2 3001 3084 -188 195 302 0 32 chr17 19529192 19529255 -69975298 + L2 LINE L2 3248 3308 -5 * 413 192 0 0 chr17 19529254 19529327 -69975226 + MIR SINE MIR 73 145 -63 1310 203 36 38 chr17 19529346 19529711 -69974842 + MLT1D LTR MaLR 82 445 -60 1221 149 0 25 chr17 19529711 19529912 -69974641 + AluSg/x SINE Alu 85 280 -32 282 87 0 0 chr17 19529912 19529958 -69974595 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 233 172 103 0 chr17 19529958 19530016 -69974537 + MLT1D LTR MaLR 442 505 0 1833 162 18 0 chr17 19530043 19530321 -69974232 + AluJo SINE Alu 1 283 -29 214 147 0 0 chr17 19530321 19530355 -69974198 + (CA)n Simple_repeat Simple_repeat 1 34 0 830 223 32 0 chr17 19530990 19531178 -69973375 - MIR SINE MIR -21 241 48 2142 129 3 0 chr17 19531182 19531493 -69973060 + AluSp SINE Alu 2 313 0 384 291 93 0 chr17 19531655 19531806 -69972747 + MIR SINE MIR 78 242 -20 606 288 75 21 chr17 19532101 19532341 -69972212 + L2 LINE L2 2723 2975 -339 731 181 0 0 chr17 19532346 19532462 -69972091 + FLAM_A SINE Alu 13 128 -14 381 294 52 66 chr17 19532531 19532742 -69971811 + L2 LINE L2 3077 3284 -29 180 111 0 0 chr17 19533095 19533122 -69971431 + (CCCG)n Simple_repeat Simple_repeat 4 30 0 30 77 0 0 chr17 19533175 19533240 -69971313 + GC_rich Low_complexity Low_complexity 1 65 0 31 0 0 0 chr17 19533368 19533399 -69971154 + GC_rich Low_complexity Low_complexity 1 31 0 22 0 7 0 chr17 19533490 19533543 -69971010 + GC_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17 19534523 19534551 -69970002 + GC_rich Low_complexity Low_complexity 1 28 0 196 326 12 47 chr17 19535504 19535561 -69968992 + L2 LINE L2 3136 3191 -81 1664 145 27 24 chr17 19535561 19535858 -69968695 - AluJo SINE Alu -14 298 1 196 326 12 47 chr17 19535858 19535886 -69968667 + L2 LINE L2 3191 3218 -54 726 245 80 8 chr17 19535888 19536125 -69968428 + MER112 DNA MER1_type 1 254 -2 305 294 103 35 chr17 19536208 19536357 -69968196 - L1ME4a LINE L1 -18 6103 5940 413 81 16 0 chr17 19536357 19536419 -69968134 + (TA)n Simple_repeat Simple_repeat 2 64 0 305 294 103 35 chr17 19536419 19536513 -69968040 - L1ME4a LINE L1 -181 5940 5854 587 249 123 33 chr17 19536536 19536752 -69967801 + MIR SINE MIR 40 262 0 221 344 81 24 chr17 19536943 19537229 -69967324 - L2 LINE L2 -12 3260 2902 357 323 144 29 chr17 19537285 19537861 -69966692 + L2 LINE L2 2608 3261 -11 369 0 0 0 chr17 19538254 19538295 -69966258 + (TG)n Simple_repeat Simple_repeat 1 41 0 1275 90 0 0 chr17 19538671 19538837 -69965716 - AluSg/x SINE Alu -14 295 130 323 244 139 26 chr17 19539286 19539401 -69965152 + MIR SINE MIR 16 143 -65 2170 102 14 0 chr17 19539437 19539732 -69964821 + AluSx SINE Alu 5 303 -9 238 248 310 9 chr17 19539775 19539888 -69964665 + MIR SINE MIR 5 151 -111 1635 101 9 4 chr17 19539888 19540116 -69964437 + AluSx SINE Alu 1 229 -83 206 174 0 43 chr17 19542030 19542076 -69962477 + (CGGGG)n Simple_repeat Simple_repeat 2 45 0 204 206 16 32 chr17 19543095 19543158 -69961395 + GA-rich Low_complexity Low_complexity 1 62 0 2288 91 0 13 chr17 19543477 19543786 -69960767 - AluSg SINE Alu -5 305 1 2082 104 0 23 chr17 19543844 19544151 -69960402 - AluSx SINE Alu -12 300 1 585 280 87 19 chr17 19544497 19544704 -69959849 + MIR SINE MIR 3 223 -39 2154 101 0 16 chr17 19544991 19545298 -69959255 + AluSx SINE Alu 1 302 -10 656 259 24 6 chr17 19545379 19545549 -69959004 + MIR SINE MIR 81 253 -9 184 288 51 68 chr17 19545685 19545803 -69958750 - MIR SINE MIR -72 136 21 304 294 83 28 chr17 19546006 19546026 -69958527 - L2 LINE L2 -35 3278 3261 1080 171 48 5 chr17 19546026 19546236 -69958317 + MER20 DNA MER1_type 1 219 0 304 294 83 28 chr17 19546236 19546395 -69958158 - L2 LINE L2 -52 3261 3089 191 246 29 14 chr17 19546425 19546494 -69958059 - L2 LINE L2 -339 2974 2905 194 67 0 33 chr17 19547278 19547308 -69957245 - L2 LINE L2 -23 3290 3262 521 291 7 7 chr17 19547320 19547461 -69957092 - MIR SINE MIR -101 161 21 264 224 75 0 chr17 19547634 19547701 -69956852 + MIR SINE MIR 118 189 -73 193 125 100 0 chr17 19548788 19548828 -69955725 + MIR SINE MIR 32 75 -187 25 0 0 0 chr17 19549703 19549728 -69954825 + GC_rich Low_complexity Low_complexity 1 25 0 1914 141 23 7 chr17 19550406 19550710 -69953843 - AluSx SINE Alu -3 309 1 260 325 0 98 chr17 19550783 19550946 -69953607 + L3b LINE CR1 1237 1383 -200 261 269 120 0 chr17 19551169 19551277 -69953276 - L1ME4a LINE L1 -2 6119 5999 260 299 112 37 chr17 19553688 19553822 -69950731 - L2 LINE L2 -10 3303 3160 577 279 88 25 chr17 19554750 19554954 -69949599 + MIR SINE MIR 1 217 -45 188 226 13 13 chr17 19554994 19555060 -69949493 + MIR SINE MIR 70 136 -72 21 0 0 0 chr17 19555291 19555312 -69949241 + GC_rich Low_complexity Low_complexity 1 21 0 183 129 0 0 chr17 19555513 19555544 -69949009 + (GGGGA)n Simple_repeat Simple_repeat 1 31 0 947 194 0 6 chr17 19556485 19556650 -69947903 - FRAM SINE Alu -13 163 1 251 343 157 36 chr17 19556764 19557012 -69947541 - L2 LINE L2 -49 3223 2946 484 335 63 0 chr17 19557412 19557570 -69946983 + L3 LINE CR1 468 635 -942 516 338 76 5 chr17 19557609 19557819 -69946734 - MIR SINE MIR -34 228 4 269 336 29 10 chr17 19557852 19557956 -69946597 + L2 LINE L2 3165 3270 -2 827 231 0 6 chr17 19558522 19558695 -69945858 - FRAM SINE Alu -5 171 1 267 307 118 0 chr17 19559130 19559257 -69945296 + MIR3 SINE MIR 45 186 -22 302 365 65 10 chr17 19559428 19559628 -69944925 + MIR SINE MIR 40 250 -12 405 298 58 45 chr17 19559670 19559912 -69944641 + MLT1I LTR MaLR 8 252 -157 366 230 32 6 chr17 19559929 19560033 -69944520 + MLT1I LTR MaLR 312 406 -3 189 0 0 0 chr17 19560036 19560057 -69944496 + (CAT)n Simple_repeat Simple_repeat 3 23 0 949 101 0 22 chr17 19560237 19560375 -69944178 + AluSq/x SINE Alu 1 135 -178 996 178 0 74 chr17 19560403 19560633 -69943920 + AluSg/x SINE Alu 83 296 -14 2491 66 0 0 chr17 19560633 19560937 -69943616 + AluSc SINE Alu 1 304 -5 996 178 0 74 chr17 19560937 19560948 -69943605 + AluSg/x SINE Alu 296 306 -4 347 244 84 38 chr17 19561778 19561909 -69942644 - L2 LINE L2 0 3272 3136 1185 153 0 0 chr17 19561958 19562134 -69942419 + AluJo SINE Alu 42 217 -95 251 174 0 0 chr17 19562136 19562182 -69942371 + FLAM SINE Alu 85 130 -3 900 246 36 17 chr17 19562197 19562489 -69942064 - L2 LINE L2 -176 3137 2837 1897 149 0 3 chr17 19562489 19562777 -69941776 - AluJb SINE Alu -19 293 7 198 209 0 0 chr17 19563289 19563332 -69941221 + (TA)n Simple_repeat Simple_repeat 1 43 0 757 219 0 0 chr17 19563334 19563462 -69941091 - FLAM_A SINE Alu -5 128 1 211 160 0 0 chr17 19563902 19563946 -69940607 - MIR SINE MIR -119 143 101 204 255 78 0 chr17 19565558 19565609 -69938944 - MIR3 SINE MIR -50 158 104 306 146 9 127 chr17 19565713 19565823 -69938730 - MIR SINE MIR -86 122 26 194 292 62 42 chr17 19566147 19566243 -69938310 + MIR3 SINE MIR 75 172 -36 346 328 25 5 chr17 19567769 19567970 -69936583 - L1ME4a LINE L1 -188 5933 5729 465 241 60 36 chr17 19568130 19568296 -69936257 - MIR3 SINE MIR -1 207 38 239 314 14 14 chr17 19568316 19568386 -69936167 - MIR3 SINE MIR -27 181 112 214 211 19 0 chr17 19568960 19569012 -69935541 + (TG)n Simple_repeat Simple_repeat 2 54 0 213 225 0 0 chr17 19569087 19569127 -69935426 + (TG)n Simple_repeat Simple_repeat 1 40 0 214 286 88 22 chr17 19569696 19569787 -69934766 - MIR SINE MIR -146 116 20 254 282 118 18 chr17 19570489 19570599 -69933954 + MIR SINE MIR 108 228 -34 420 308 93 11 chr17 19572990 19573172 -69931381 - MIR SINE MIR -19 243 47 260 301 0 0 chr17 19573564 19573637 -69930916 - MIR SINE MIR -79 183 111 268 204 245 27 chr17 19573852 19573999 -69930554 + Charlie8 DNA MER1_type 38 216 -2201 421 232 69 45 chr17 19574426 19574616 -69929937 - MIR3 SINE MIR -63 145 2 1040 164 0 0 chr17 19575227 19575392 -69929161 + AluJb SINE Alu 131 295 -17 384 267 11 120 chr17 19575908 19575992 -69928561 + L3 LINE CR1 1298 1390 -187 2199 104 0 3 chr17 19575992 19576289 -69928264 - AluSx SINE Alu -16 296 1 2368 73 0 10 chr17 19576289 19576592 -69927961 - AluSq SINE Alu -13 300 1 384 267 11 120 chr17 19576592 19576697 -69927856 + L3 LINE CR1 1388 1467 -110 236 218 26 13 chr17 19576886 19576964 -69927589 + (TG)n Simple_repeat Simple_repeat 2 80 0 245 306 47 0 chr17 19577546 19577631 -69926922 - MIR SINE MIR -78 130 42 315 203 0 0 chr17 19578074 19578153 -69926400 + (CA)n Simple_repeat Simple_repeat 1 79 0 180 219 0 0 chr17 19578224 19578265 -69926288 + GA-rich Low_complexity Low_complexity 2 42 0 212 209 0 0 chr17 19579293 19579336 -69925217 + L2 LINE L2 3270 3312 -1 462 65 0 0 chr17 19579398 19579460 -69925093 + (TGAA)n Simple_repeat Simple_repeat 1 62 0 1589 171 0 4 chr17 19579976 19580239 -69924314 - AluJb SINE Alu -17 295 34 202 346 20 20 chr17 19580672 19580773 -69923780 + MER5A DNA MER1_type 47 147 -42 2413 70 3 13 chr17 19581489 19581802 -69922751 + AluSg SINE Alu 1 310 0 249 264 134 73 chr17 19582321 19582388 -69922165 - L2 LINE L2 -509 2805 2744 228 35 0 0 chr17 19582388 19582417 -69922136 + (TG)n Simple_repeat Simple_repeat 2 30 0 1577 99 149 11 chr17 19582417 19582679 -69921874 - AluSg1 SINE Alu -11 298 1 249 264 134 73 chr17 19582679 19582856 -69921697 - L2 LINE L2 -569 2745 2545 2501 70 3 0 chr17 19583605 19583917 -69920636 - AluSp SINE Alu 0 313 1 691 135 183 29 chr17 19584566 19584765 -69919788 - LTR8A LTR ERV1 -144 583 349 1755 150 7 4 chr17 19584765 19585039 -69919514 + AluJb SINE Alu 1 275 -37 432 133 48 12 chr17 19585039 19585122 -69919431 - THE1A LTR MaLR -76 279 194 229 219 0 208 chr17 19585184 19585376 -69919177 - L2 LINE L2 -93 3179 3028 328 348 32 19 chr17 19585426 19585584 -69918969 - MIR SINE MIR -12 250 91 223 252 23 28 chr17 19586435 19586548 -69918005 - MIR SINE MIR -51 211 101 201 298 35 26 chr17 19586556 19586670 -69917883 + L2 LINE L2 2862 2976 -337 430 280 6 64 chr17 19586714 19586871 -69917682 + L2 LINE L2 3166 3313 0 564 227 45 0 chr17 19587065 19587197 -69917356 - MLT1J2 LTR MaLR -289 161 24 2026 72 118 0 chr17 19587422 19587701 -69916852 + AluSp SINE Alu 1 312 -1 383 220 101 9 chr17 19588211 19588320 -69916233 - L2 LINE L2 -228 3044 2926 666 272 72 96 chr17 19588580 19589039 -69915514 + L2 LINE L2 2866 3313 0 24 0 0 0 chr17 19589178 19589202 -69915351 + GC_rich Low_complexity Low_complexity 1 24 0 206 155 14 84 chr17 19589312 19589383 -69915170 + (CGGGG)n Simple_repeat Simple_repeat 2 67 0 22 0 0 0 chr17 19589416 19589438 -69915115 + GC_rich Low_complexity Low_complexity 1 22 0 194 175 25 0 chr17 19589899 19589939 -69914614 + L2 LINE L2 3225 3265 -7 244 320 72 61 chr17 19590554 19590735 -69913818 - MER5A DNA MER1_type 0 189 7 237 274 0 0 chr17 19591028 19591079 -69913474 + MER91A DNA MER1_type 2 52 -144 1761 111 26 102 chr17 19591174 19591518 -69913035 - AluYb8 SINE Alu 0 318 1 224 254 0 16 chr17 19591857 19591920 -69912633 - MIR SINE MIR -105 157 96 193 273 50 93 chr17 19592043 19592204 -69912349 + L2 LINE L2 3030 3183 -89 2181 94 7 0 chr17 19593180 19593477 -69911076 - AluSp SINE Alu -13 300 2 359 304 67 7 chr17 19593628 19593763 -69910790 - L2 LINE L2 -9 3304 3162 207 279 0 49 chr17 19594903 19594964 -69909589 + MIR3 SINE MIR 99 156 -52 271 362 162 10 chr17 19595562 19596063 -69908490 - L2 LINE L2 -21 3251 2669 188 333 0 0 chr17 19596040 19596097 -69908456 - MIR SINE MIR -61 147 91 * 339 293 143 62 chr17 19596369 19596628 -69907925 - L1ME4a LINE L1 -8 6113 5834 269 328 16 49 chr17 19596679 19596801 -69907752 + L2 LINE L2 3191 3308 -5 214 343 112 15 chr17 19597016 19597150 -69907403 - L2 LINE L2 0 3272 3126 832 247 31 26 chr17 19597999 19598226 -69906327 + MIR SINE MIR 32 259 -3 195 314 149 35 chr17 19598371 19598632 -69905921 - L2 LINE L2 -16 3256 2966 550 277 171 28 chr17 19599085 19599406 -69905147 - L2 LINE L2 -79 3193 2827 245 276 79 0 chr17 19599500 19599576 -69904977 + MIR SINE MIR 41 122 -86 368 343 122 0 chr17 19600764 19601035 -69903518 - MLT1I LTR MaLR -8 401 98 203 300 43 0 chr17 19601149 19601219 -69903334 - L2 LINE L2 -541 2773 2701 620 202 84 17 chr17 19601220 19601398 -69903155 - L1ME3A LINE L1 0 6170 5981 1866 152 30 0 chr17 19601447 19601744 -69902809 - AluSx SINE Alu -1 311 6 870 117 70 0 chr17 19601747 19601875 -69902678 - AluSq/x SINE Alu -175 137 1 434 228 81 0 chr17 19601889 19602012 -69902541 - L1ME3A LINE L1 -304 5866 5734 638 122 143 0 chr17 19602028 19602126 -69902427 + FLAM_C SINE Alu 10 121 -22 315 309 8 57 chr17 19604372 19604615 -69899938 - L1ME4a LINE L1 -28 6093 5824 294 317 248 6 chr17 19604890 19605051 -69899502 + MIR SINE MIR 49 248 -14 185 360 40 30 chr17 19605069 19605169 -69899384 + MIR SINE MIR 141 241 -21 729 250 17 11 chr17 19605202 19605378 -69899175 + MER45A DNA AcHobo 1 177 -1 234 0 0 0 chr17 19608244 19608270 -69896283 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 315 330 166 27 chr17 19609154 19609867 -69894686 + L2 LINE L2 2425 3272 0 283 328 34 0 chr17 19609867 19609986 -69894567 + (TGGG)n Simple_repeat Simple_repeat 1 123 0 538 193 21 0 chr17 19609986 19610131 -69894422 + (TGGA)n Simple_repeat Simple_repeat 1 148 0 207 321 142 37 chr17 19610440 19610574 -69893979 + MIR3 SINE MIR 29 176 -32 35 24 0 0 chr17 19610894 19610936 -69893617 + AT_rich Low_complexity Low_complexity 1 42 0 402 199 0 0 chr17 19611000 19611090 -69893463 + MIR SINE MIR 66 156 -52 453 315 13 34 chr17 19611158 19611307 -69893246 - MIR SINE MIR -50 212 67 1616 187 4 0 chr17 19613328 19613596 -69890957 - AluJb SINE Alu -43 269 1 1364 125 125 18 chr17 19613618 19613899 -69890654 - Tigger2 DNA MER2_type -138 2580 2270 218 163 47 0 chr17 19614146 19614189 -69890364 + MIR SINE MIR 104 148 -60 279 265 145 16 chr17 19614255 19614379 -69890174 - MIR SINE MIR -63 145 7 237 263 140 64 chr17 19614442 19614472 -69890081 - L1MC4a LINE L1 -1875 5933 5907 1824 134 54 0 chr17 19614472 19614749 -69889804 - AluSx SINE Alu -20 292 1 1825 148 20 3 chr17 19614752 19615056 -69889497 - AluJo SINE Alu -3 309 1 237 263 140 64 chr17 19615056 19615257 -69889296 - L1MC4a LINE L1 -1902 5906 5680 315 318 16 16 chr17 19615269 19615395 -69889158 - L1MC4a LINE L1 -2188 5620 5495 406 297 174 0 chr17 19615470 19615625 -69888928 + MIR SINE MIR 50 231 -31 240 220 44 99 chr17 19615804 19615895 -69888658 - MIR3 SINE MIR -42 166 81 220 322 44 0 chr17 19616138 19616228 -69888325 + MER5A DNA MER1_type 16 109 -80 474 284 111 24 chr17 19616454 19616662 -69887891 - MIR SINE MIR -8 254 29 2267 66 7 10 chr17 19617863 19618164 -69886389 - AluY SINE Alu -9 302 3 2097 113 3 3 chr17 19618166 19618457 -69886096 - AluSq SINE Alu -22 291 1 208 300 40 20 chr17 19618650 19618750 -69885803 + MIR SINE MIR 88 188 -60 24 0 0 0 chr17 19620034 19620058 -69884495 + GC_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr17 19620244 19620272 -69884281 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr17 19620546 19620570 -69883983 + GC_rich Low_complexity Low_complexity 1 24 0 207 254 0 0 chr17 19622055 19622118 -69882435 + CT-rich Low_complexity Low_complexity 1 63 0 224 261 57 89 chr17 19622500 19622657 -69881896 + MIR3 SINE MIR 28 179 -29 290 322 107 8 chr17 19623449 19623570 -69880983 - L2 LINE L2 -1 3312 3180 288 243 21 111 chr17 19624033 19624268 -69880285 + MER102b DNA MER1_type 77 290 -51 408 261 235 41 chr17 19624440 19624708 -69879845 - L2 LINE L2 -48 3265 2946 201 191 21 21 chr17 19624697 19624744 -69879809 - MIR SINE MIR -95 113 67 * 1747 84 133 0 chr17 19624874 19625152 -69879401 + AluSp SINE Alu 1 311 0 257 224 17 0 chr17 19626801 19626859 -69877694 + CT-rich Low_complexity Low_complexity 6 64 0 219 69 0 0 chr17 19628156 19628185 -69876368 + (CAGCC)n Simple_repeat Simple_repeat 3 31 0 276 295 0 27 chr17 19629473 19629585 -69874968 + CT-rich Low_complexity Low_complexity 3 111 0 297 128 0 0 chr17 19630382 19630429 -69874124 + (TG)n Simple_repeat Simple_repeat 1 47 0 22 0 0 0 chr17 19630655 19630677 -69873876 + GC_rich Low_complexity Low_complexity 1 22 0 268 80 0 40 chr17 19630950 19631000 -69873553 + (TCCC)n Simple_repeat Simple_repeat 4 51 0 369 0 0 0 chr17 19631860 19631901 -69872652 + (CAG)n Simple_repeat Simple_repeat 1 41 0 218 356 48 0 chr17 19637261 19637365 -69867188 + MIR SINE MIR 80 188 -74 214 162 0 0 chr17 19638238 19638275 -69866278 + CT-rich Low_complexity Low_complexity 1 37 0 187 321 76 30 chr17 19638275 19638512 -69866041 + L2 LINE L2 1607 1854 -1460 226 323 43 0 chr17 19638927 19639006 -69865547 + MIR SINE MIR 31 104 -104 196 261 87 0 chr17 19639466 19639535 -69865018 + MIR SINE MIR 103 177 -85 321 261 254 0 chr17 19639908 19640038 -69864515 + MIR SINE MIR 76 238 -24 238 207 52 17 chr17 19640508 19640566 -69863987 + MIR SINE MIR 117 176 -86 2432 63 0 0 chr17 19640579 19640879 -69863674 + AluY SINE Alu 1 300 -11 2129 124 0 7 chr17 19640886 19641193 -69863360 + AluSx SINE Alu 1 305 -7 1678 139 45 14 chr17 19641457 19641770 -69862783 - AluJb SINE Alu 0 312 1 212 265 20 0 chr17 19642488 19642537 -69862016 - L2 LINE L2 0 3313 3264 183 377 0 0 chr17 19642577 19642638 -69861915 - MIR SINE MIR -113 149 89 869 206 7 0 chr17 19642747 19642902 -69861651 - AluJb SINE Alu -15 297 142 2208 93 0 0 chr17 19642917 19643245 -69861308 - AluSc SINE Alu 0 309 1 419 310 26 0 chr17 19643262 19643375 -69861178 + MIR SINE MIR 82 197 -65 258 268 0 0 chr17 19644260 19644316 -69860237 - L2 LINE L2 -213 3059 3004 775 271 147 0 chr17 19644719 19644992 -69859561 - MLT1H LTR MaLR -198 351 39 746 9 60 26 chr17 19646432 19646548 -69858005 + (TTTTA)n Simple_repeat Simple_repeat 5 124 0 1833 147 4 0 chr17 19646551 19646823 -69857730 - AluJb SINE Alu -31 281 9 286 274 74 21 chr17 19646837 19646932 -69857621 - MIR SINE MIR -56 206 107 265 344 45 40 chr17 19646968 19647192 -69857361 - L2 LINE L2 -3 3310 3086 250 85 21 21 chr17 19648819 19648866 -69855687 + (TA)n Simple_repeat Simple_repeat 2 48 0 618 163 62 47 chr17 19650722 19650851 -69853702 - FLAM_C SINE Alu -2 131 1 197 266 78 0 chr17 19651591 19651655 -69852898 - MIR3 SINE MIR -31 177 109 186 269 0 0 chr17 19654052 19654104 -69850449 + MIR SINE MIR 81 132 -76 264 264 81 26 chr17 19654188 19654346 -69850207 + MIR SINE MIR 19 182 -63 257 125 0 0 chr17 19654845 19654885 -69849668 + L3 LINE CR1 1426 1465 -112 291 276 58 0 chr17 19655452 19655539 -69849014 + MIR SINE MIR 58 149 -113 2006 115 11 4 chr17 19655614 19655925 -69848628 - AluSx SINE Alu 0 313 1 1945 151 0 0 chr17 19655930 19656252 -69848301 - AluSx SINE Alu 0 322 1 480 241 120 44 chr17 19656742 19656900 -69847653 - MIR SINE MIR -13 249 80 24 0 0 0 chr17 19657019 19657043 -69847510 + GC_rich Low_complexity Low_complexity 1 24 0 199 308 15 0 chr17 19658172 19658237 -69846316 - MIR SINE MIR -119 143 78 193 281 157 0 chr17 19658694 19658783 -69845770 + L2 LINE L2 3149 3251 -21 274 248 62 54 chr17 19659292 19659436 -69845117 + MIR3 SINE MIR 25 173 -35 917 146 0 7 chr17 19659723 19659874 -69844679 + L1MB8 LINE L1 6029 6178 0 248 349 89 12 chr17 19664898 19665113 -69839440 + MIR SINE MIR 9 242 -20 359 309 40 27 chr17 19666040 19666189 -69838364 + MIR3 SINE MIR 3 153 -55 219 103 0 0 chr17 19666866 19666905 -69837648 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2328 90 3 0 chr17 19668970 19669280 -69835273 + AluSp SINE Alu 1 311 -2 244 264 73 36 chr17 19670044 19670154 -69834399 + MIR SINE MIR 21 134 -74 237 200 108 0 chr17 19670240 19670305 -69834248 + MIR3 SINE MIR 114 185 -23 327 356 13 10 chr17 19670742 19670877 -69833676 + MIR3 SINE MIR 63 203 -5 1926 141 0 30 chr17 19670884 19671220 -69833333 - AluSx SINE Alu 0 327 1 2291 104 0 0 chr17 19673342 19673640 -69830913 - AluSc SINE Alu -11 298 1 619 168 0 20 chr17 19674702 19674803 -69829750 - FLAM_A SINE Alu -20 122 24 1953 98 59 18 chr17 19674803 19674970 -69829583 - AluSg1 SINE Alu -11 298 113 2266 107 0 0 chr17 19674970 19675268 -69829285 - AluSc SINE Alu -11 298 1 1953 98 59 18 chr17 19675268 19675386 -69829167 - AluSg1 SINE Alu -196 113 1 2138 107 7 0 chr17 19675462 19675762 -69828791 - AluSp SINE Alu -11 302 1 2039 128 0 0 chr17 19675986 19676275 -69828278 + AluSx SINE Alu 1 289 -23 230 349 36 46 chr17 19677515 19677710 -69826843 + MIR SINE MIR 10 202 -60 203 302 0 47 chr17 19678120 19678206 -69826347 + MIR SINE MIR 34 115 -93 194 362 124 37 chr17 19679594 19679812 -69824741 - L2 LINE L2 0 3313 3077 1612 163 75 14 chr17 19679951 19680233 -69824320 - AluJb SINE Alu -1 301 3 1918 152 0 10 chr17 19680245 19680555 -69823998 - AluJo SINE Alu -5 307 1 2453 57 0 0 chr17 19680599 19680896 -69823657 - AluY SINE Alu -14 297 1 2031 126 0 0 chr17 19680896 19681180 -69823373 - AluSx SINE Alu -9 303 19 404 259 211 24 chr17 19681595 19681761 -69822792 - MER117 DNA MER1_type 0 197 1 1946 90 26 8 chr17 19681773 19682041 -69822512 - AluSx SINE Alu -15 297 25 2246 96 10 0 chr17 19682125 19682428 -69822125 - AluSx SINE Alu -6 306 1 214 394 38 8 chr17 19684534 19684666 -69819887 + MIR3 SINE MIR 10 145 -63 563 319 18 33 chr17 19686216 19686489 -69818064 - L1ME LINE L1 -321 5800 5532 191 304 18 0 chr17 19687342 19687398 -69817155 + L2 LINE L2 3137 3193 -79 2269 69 0 3 chr17 19687475 19687765 -69816788 + AluY SINE Alu 1 289 -22 2034 147 0 3 chr17 19687774 19688081 -69816472 + AluSx SINE Alu 1 306 -6 231 295 47 47 chr17 19689446 19689575 -69814978 + L2 LINE L2 2911 3039 -233 314 338 21 48 chr17 19689575 19689720 -69814833 - L1MC4 LINE L1 -4 8038 7898 193 293 35 0 chr17 19690113 19690171 -69814382 + MIR3 SINE MIR 97 156 -52 2241 100 3 3 chr17 19690330 19690640 -69813913 - AluY SINE Alu -1 310 1 222 37 0 0 chr17 19690641 19690668 -69813885 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 2210 106 0 0 chr17 19690673 19690957 -69813596 - AluSx SINE Alu -28 284 1 2233 113 3 0 chr17 19691361 19691671 -69812882 + AluSx SINE Alu 1 311 -1 450 256 142 62 chr17 19691877 19692166 -69812387 - L3b LINE CR1 -156 1427 1116 306 356 44 31 chr17 19692494 19692719 -69811834 + L3 LINE CR1 708 935 -642 509 230 79 7 chr17 19692834 19692973 -69811580 + L3 LINE CR1 1242 1390 -187 187 386 34 0 chr17 19693046 19693134 -69811419 - MIR SINE MIR -58 150 60 188 298 177 32 chr17 19693195 19693353 -69811200 + L3 LINE CR1 1382 1562 -15 274 228 114 63 chr17 19695643 19695801 -69808752 + L1ME4a LINE L1 5956 6121 0 293 273 118 35 chr17 19696376 19696562 -69807991 + MIR3 SINE MIR 2 205 -3 251 271 129 0 chr17 19697080 19697150 -69807403 + MIR SINE MIR 103 181 -81 212 286 62 124 chr17 19697246 19697519 -69807034 + L2 LINE L2 2999 3254 -18 202 320 148 16 chr17 19698040 19698162 -69806391 - MIR3 SINE MIR -56 152 15 243 329 40 0 chr17 19698968 19699044 -69805509 + L2 LINE L2 3193 3271 -1 185 311 14 27 chr17 19699383 19699457 -69805096 + MIR SINE MIR 93 165 -97 2233 95 0 0 chr17 19699801 19700096 -69804457 + AluY SINE Alu 1 295 -16 21 0 0 0 chr17 19701967 19701988 -69802565 + AT_rich Low_complexity Low_complexity 1 21 0 2504 59 0 3 chr17 19701991 19702298 -69802255 + AluY SINE Alu 1 306 -5 226 292 28 0 chr17 19703482 19703554 -69800999 + MLT1K LTR MaLR 512 585 -3 1686 149 4 15 chr17 19703856 19704125 -69800428 - AluJb SINE Alu -46 266 1 692 289 11 27 chr17 19706646 19706683 -69797870 + L1ME3A LINE L1 5610 5646 -524 455 143 13 0 chr17 19706683 19706760 -69797793 + MER116 DNA Mariner 3 80 0 692 289 11 27 chr17 19706760 19706985 -69797568 + L1ME3A LINE L1 5646 5868 -302 476 198 123 14 chr17 19707008 19707217 -69797336 + L1ME3A LINE L1 5925 6170 0 232 279 257 7 chr17 19708870 19709006 -69795547 + MIR3 SINE MIR 21 190 -18 211 322 56 7 chr17 19709464 19709607 -69794946 + (CTGGGG)n Simple_repeat Simple_repeat 5 154 0 379 356 49 49 chr17 19709841 19710189 -69794364 + L2 LINE L2 2917 3264 -49 219 339 73 0 chr17 19712139 19712248 -69792305 - MIR SINE MIR -143 119 3 245 289 133 0 chr17 19712302 19712392 -69792161 - L2 LINE L2 0 3272 3171 309 51 0 0 chr17 19712510 19712549 -69792004 + (CA)n Simple_repeat Simple_repeat 1 39 0 424 335 51 6 chr17 19713277 19713453 -69791100 - MIR SINE MIR -76 186 3 245 291 154 43 chr17 19713472 19713589 -69790964 - MIR SINE MIR -62 146 17 199 307 80 23 chr17 19713721 19713809 -69790744 + MIR SINE MIR 48 140 -122 243 319 17 42 chr17 19714009 19714128 -69790425 + MIR3 SINE MIR 40 155 -53 185 353 133 0 chr17 19714401 19714551 -69790002 + L2 LINE L2 2691 2860 -454 1230 197 78 7 chr17 19714599 19715047 -69789506 + MLT1F1 LTR MaLR 3 567 0 426 263 29 64 chr17 19715048 19715219 -69789334 + L2 LINE L2 2900 3064 -208 552 316 68 46 chr17 19716404 19716583 -69787970 + MIR SINE MIR 21 208 -54 2042 134 3 0 chr17 19716583 19716868 -69787685 + AluSx SINE Alu 1 289 -23 465 66 0 0 chr17 19716868 19716929 -69787624 + (CATA)n Simple_repeat Simple_repeat 4 64 0 552 316 68 46 chr17 19716935 19716992 -69787561 + MIR SINE MIR 208 262 0 254 308 62 72 chr17 19717370 19717565 -69786988 - MIR SINE MIR -4 258 66 346 298 106 14 chr17 19717679 19717820 -69786733 - MIR SINE MIR -20 242 89 500 318 46 15 chr17 19719659 19719854 -69784699 + MIR SINE MIR 57 257 -5 2339 90 0 0 chr17 19719856 19720157 -69784396 - AluSg SINE Alu -9 301 1 252 339 77 15 chr17 19720162 19720292 -69784261 - MIR3 SINE MIR -67 141 4 615 271 122 18 chr17 19720641 19721013 -69783540 + L1MC4a LINE L1 5624 6017 -104 2191 111 0 7 chr17 19721862 19722168 -69782385 + AluSq SINE Alu 1 304 -9 2139 123 0 7 chr17 19722183 19722485 -69782068 + AluSx SINE Alu 13 312 0 205 333 163 41 chr17 19723712 19723835 -69780718 - MER5B DNA MER1_type 0 178 41 1630 109 26 0 chr17 19723835 19724064 -69780489 + AluSg SINE Alu 1 235 -75 2251 84 3 29 chr17 19725329 19725640 -69778913 - AluSx SINE Alu -4 308 6 241 321 89 18 chr17 19725892 19726004 -69778549 + L3 LINE CR1 1362 1481 -96 255 196 18 0 chr17 19726041 19726097 -69778456 - MER96 DNA MER1_type? 0 175 119 188 222 0 0 chr17 19726699 19726735 -69777818 - L2 LINE L2 -16 3297 3262 356 225 196 0 chr17 19726737 19726910 -69777643 - L2 LINE L2 -240 3073 2867 267 283 75 19 chr17 19727403 19727509 -69777044 - MIR SINE MIR -131 131 20 209 304 160 28 chr17 19727856 19728037 -69776516 + L2 LINE L2 2830 3034 -238 1624 200 7 0 chr17 19728363 19728653 -69775900 + AluJo SINE Alu 1 292 -20 2162 106 0 0 chr17 19728654 19728936 -69775617 + AluSc SINE Alu 13 294 -15 261 0 0 0 chr17 19728936 19728965 -69775588 + (TA)n Simple_repeat Simple_repeat 1 29 0 300 288 0 0 chr17 19728967 19729033 -69775520 - L1MC4 LINE L1 -1339 6703 6638 1860 131 37 20 chr17 19729371 19729668 -69774885 - AluJo SINE Alu -9 303 2 218 241 17 52 chr17 19729860 19729918 -69774635 - MIR SINE MIR -8 254 199 728 184 7 29 chr17 19729922 19730058 -69774495 - FLAM_C SINE Alu -10 133 1 368 280 166 6 chr17 19730074 19730231 -69774322 - MIR SINE MIR 0 262 81 681 251 142 5 chr17 19731835 19732046 -69772507 + MIR SINE MIR 13 252 -10 350 390 16 37 chr17 19732270 19732369 -69772184 + L1MB7 LINE L1 5592 5687 -434 2490 64 0 3 chr17 19732369 19732681 -69771872 + AluY SINE Alu 1 311 0 350 390 16 37 chr17 19732681 19732768 -69771785 + L1MB7 LINE L1 5687 5774 -347 2423 62 10 3 chr17 19732872 19733181 -69771372 + AluY SINE Alu 1 311 0 228 135 0 0 chr17 19733181 19733218 -69771335 + (TA)n Simple_repeat Simple_repeat 2 38 0 472 286 84 5 chr17 19733219 19733422 -69771131 + L1MB7 LINE L1 5966 6184 0 1786 124 50 7 chr17 19733431 19733713 -69770840 + AluSx SINE Alu 1 294 -18 189 0 0 0 chr17 19733758 19733779 -69770774 + (GA)n Simple_repeat Simple_repeat 2 22 0 278 256 50 16 chr17 19733799 19733834 -69770719 + L1ME4a LINE L1 5997 6029 -92 1665 168 18 3 chr17 19733834 19734120 -69770433 - AluJo SINE Alu -22 290 1 278 256 50 16 chr17 19734120 19734205 -69770348 + L1ME4a LINE L1 6029 6121 0 2003 69 0 0 chr17 19734463 19734710 -69769843 + AluY SINE Alu 1 247 -64 207 0 0 0 chr17 19734712 19734735 -69769818 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 239 333 91 15 chr17 19734804 19734936 -69769617 - MIR3 SINE MIR -64 144 3 195 289 201 29 chr17 19735540 19735779 -69768774 + L2 LINE L2 2809 3088 -225 227 279 29 15 chr17 19837132 19837200 -69667353 + MIR SINE MIR 40 108 -154 2194 122 0 0 chr17 19837222 19837525 -69667028 - AluSx SINE Alu -9 303 1 855 264 199 13 chr17 19837526 19837913 -69666640 - L2 LINE L2 0 3272 2814 1789 109 28 0 chr17 19838654 19838902 -69665651 - AluSq SINE Alu -46 267 13 321 258 129 16 chr17 19839627 19839751 -69664802 - L2 LINE L2 0 3313 3176 1589 200 51 3 chr17 19839877 19840244 -69664309 + MLT1B LTR MaLR 1 424 -4 799 269 66 4 chr17 19840591 19840818 -69663735 + MIR SINE MIR 2 242 -20 186 71 0 0 chr17 19840923 19840951 -69663602 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 2210 82 7 0 chr17 19840951 19841231 -69663322 - AluSx SINE Alu -28 284 3 328 301 0 0 chr17 19841461 19841544 -69663009 - MIR SINE MIR -71 191 109 2239 105 0 6 chr17 19842654 19842968 -69661585 + AluSx SINE Alu 1 312 0 2179 52 38 10 chr17 19843062 19843352 -69661201 - AluY SINE Alu -13 298 1 409 157 92 105 chr17 19843352 19843386 -69661167 - MER5B DNA MER1_type -27 151 118 1503 175 32 23 chr17 19843386 19843695 -69660858 + AluJb SINE Alu 1 312 0 409 157 92 105 chr17 19843695 19843749 -69660804 - MER5B DNA MER1_type -60 118 65 2181 96 10 3 chr17 19843749 19844050 -69660503 - AluSg SINE Alu -7 303 1 409 157 92 105 chr17 19844050 19844113 -69660440 - MER5B DNA MER1_type -113 65 1 2099 88 0 0 chr17 19844325 19844598 -69659955 + AluSg SINE Alu 1 273 -37 468 91 0 0 chr17 19844614 19844680 -69659873 + (CA)n Simple_repeat Simple_repeat 2 67 0 214 256 37 49 chr17 19844794 19844876 -69659677 + MIR SINE MIR 117 197 -65 213 303 0 45 chr17 19844923 19844989 -69659564 - MIR SINE MIR -1 261 199 1137 180 167 0 chr17 19844995 19845422 -69659131 + MER39 LTR ERV1 3 495 -158 2129 114 7 3 chr17 19845425 19845724 -69658829 + AluSx SINE Alu 1 300 -12 2176 112 3 6 chr17 19845726 19846039 -69658514 + AluSp SINE Alu 1 312 -1 554 224 0 9 chr17 19846099 19846215 -69658338 - FLAM_A SINE Alu -3 139 25 2257 96 0 16 chr17 19846232 19846544 -69658009 - AluSx SINE Alu 0 312 6 799 134 27 13 chr17 19846554 19846703 -69657850 + MER39 LTR ERV1 557 707 0 1788 100 8 15 chr17 19846704 19846965 -69657588 - AluSx SINE Alu -20 292 34 646 268 49 0 chr17 19846986 19847150 -69657403 - MIR SINE MIR -80 182 11 227 286 32 0 chr17 19847169 19847232 -69657321 + MLT1K LTR MaLR 514 578 -10 1083 139 0 6 chr17 19847371 19847844 -69656709 + (GGA)n Simple_repeat Simple_repeat 1 470 0 611 239 91 5 chr17 19848641 19848838 -69655715 + LTR33 LTR ERVL 1 214 -307 975 204 160 85 chr17 19848853 19849034 -69655519 + MLT1F1 LTR MaLR 8 174 -393 1724 160 0 26 chr17 19849034 19849340 -69655213 + AluJo SINE Alu 14 311 -1 975 204 160 85 chr17 19849340 19849360 -69655193 + MLT1F1 LTR MaLR 174 191 -376 2157 119 6 6 chr17 19849360 19849672 -69654881 + AluSx SINE Alu 1 312 0 975 204 160 85 chr17 19849672 19849806 -69654747 + MLT1F1 LTR MaLR 191 314 -253 2198 80 3 20 chr17 19849806 19850107 -69654446 - AluSp SINE Alu -16 297 2 975 204 160 85 chr17 19850107 19850291 -69654262 + MLT1F1 LTR MaLR 314 559 -8 487 305 85 36 chr17 19850501 19850920 -69653633 - L2 LINE L2 -76 3237 2797 1739 184 92 9 chr17 19851310 19851647 -69652906 + MLT1A1 LTR MaLR 1 365 0 232 382 32 0 chr17 19851955 19852078 -69652475 + MIR SINE MIR 29 155 -107 517 256 155 14 chr17 19853014 19853047 -69651506 - Charlie8 DNA MER1_type -65 276 249 583 248 38 105 chr17 19853047 19853257 -69651296 - MER91A DNA MER1_type 0 196 1 517 256 155 14 chr17 19853257 19853430 -69651123 - Charlie8 DNA MER1_type -92 249 41 230 192 77 77 chr17 19854405 19854483 -69650070 + LTR48B LTR ERV1 5 82 -562 313 340 82 0 chr17 19855738 19855885 -69648668 + MIR SINE MIR 80 238 -24 329 259 78 0 chr17 19856612 19856728 -69647825 + MIR3 SINE MIR 33 157 -51 807 204 45 23 chr17 19858261 19858481 -69646072 + Charlie1 DNA MER1_type 2347 2571 -190 1045 131 0 0 chr17 19858492 19858645 -69645908 - FRAM SINE Alu -13 163 11 3905 160 22 25 chr17 19859389 19860077 -69644476 + L1MB2 LINE L1 5483 6168 -3 805 191 0 0 chr17 19860080 19860221 -69644332 + FRAM SINE Alu 1 141 -35 446 252 0 19 chr17 19862145 19862252 -69642301 - MLT1C LTR MaLR -51 416 312 877 256 150 34 chr17 19862333 19862747 -69641806 + MLT1C LTR MaLR 6 467 0 1487 164 44 49 chr17 19863066 19863431 -69641122 + L1MB3 LINE L1 5820 6182 -1 307 326 23 30 chr17 19863433 19863565 -69640988 + L3 LINE CR1 1428 1558 -19 198 0 0 0 chr17 19864467 19864489 -69640064 + (TG)n Simple_repeat Simple_repeat 1 22 0 280 250 71 0 chr17 19865532 19865616 -69638937 + MIR3 SINE MIR 74 163 -45 232 258 161 8 chr17 19865657 19865781 -69638772 + MER103 DNA DNA 12 154 -12 2540 62 3 10 chr17 19866050 19866357 -69638196 + AluY SINE Alu 1 305 -6 1998 108 32 157 chr17 19866606 19866905 -69637648 - MLT2D LTR ERVL -1 413 78 1378 127 9 146 chr17 19866905 19867102 -69637451 - AluJo SINE Alu -16 286 150 2170 117 0 46 chr17 19867102 19867248 -69637305 + AluSx SINE Alu 1 128 -184 2238 91 3 11 chr17 19867248 19867557 -69636996 + AluY SINE Alu 1 307 0 2170 117 0 46 chr17 19867557 19867716 -69636837 + AluSx SINE Alu 128 293 -19 1378 127 9 146 chr17 19867716 19867848 -69636705 - AluJo SINE Alu -152 150 2 1998 108 32 157 chr17 19867848 19867906 -69636647 - MLT2D LTR ERVL -336 78 126 1949 138 0 51 chr17 19867906 19868070 -69636483 - AluSx SINE Alu -16 296 154 2720 49 0 0 chr17 19868070 19868375 -69636178 - AluY SINE Alu -6 305 1 1949 138 0 51 chr17 19868375 19868522 -69636031 - AluSx SINE Alu -158 154 1 1998 108 32 157 chr17 19868522 19868635 -69635918 - MLT2D LTR ERVL -287 127 1 2263 132 7 0 chr17 19869513 19869823 -69634730 - AluSx SINE Alu 0 312 1 196 345 95 0 chr17 19870164 19870280 -69634273 + L3b LINE CR1 1102 1228 -355 411 231 294 0 chr17 19870763 19870906 -69633647 + MER91A DNA MER1_type 1 185 -11 2574 126 25 0 chr17 19871210 19871686 -69632867 + MER1A DNA MER1_type 1 529 0 2449 88 3 0 chr17 19871687 19871993 -69632560 + AluSq SINE Alu 3 309 -4 391 265 94 39 chr17 19874913 19875094 -69629459 - MIR3 SINE MIR -14 194 4 220 271 129 0 chr17 19875181 19875251 -69629302 + L2 LINE L2 3233 3311 -2 2357 89 0 0 chr17 19875393 19875712 -69628841 + AluSc SINE Alu 1 319 0 21 36 0 0 chr17 19876290 19876318 -69628235 + AT_rich Low_complexity Low_complexity 1 28 0 1927 156 22 33 chr17 19876573 19876933 -69627620 + MLT1A1 LTR MaLR 10 365 0 525 58 0 0 chr17 19876969 19877038 -69627515 + (TG)n Simple_repeat Simple_repeat 1 69 0 1641 162 29 11 chr17 19878799 19879071 -69625482 - AluJb SINE Alu -35 277 1 37 62 0 0 chr17 19883013 19883078 -69621475 + GC_rich Low_complexity Low_complexity 1 65 0 22 0 0 0 chr17 19883187 19883209 -69621344 + GC_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr17 19883260 19883285 -69621268 + GC_rich Low_complexity Low_complexity 1 25 0 29 28 0 0 chr17 19883448 19883484 -69621069 + GC_rich Low_complexity Low_complexity 1 36 0 29 47 0 0 chr17 19883518 19883561 -69620992 + GC_rich Low_complexity Low_complexity 1 43 0 195 114 0 0 chr17 19883561 19883596 -69620957 + (CCCCG)n Simple_repeat Simple_repeat 5 39 0 418 305 23 11 chr17 19883933 19884107 -69620446 + MER5A DNA MER1_type 7 182 -7 2940 114 10 22 chr17 19884761 19885011 -69619542 - MER31A LTR ERV1 0 485 242 3971 131 71 6 chr17 19885011 19885685 -69618868 + LTR62 LTR ERVK 1 718 -1 2940 114 10 22 chr17 19885685 19885925 -69618628 - MER31A LTR ERV1 -243 242 1 336 143 0 0 chr17 19886677 19886733 -69617820 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 1943 152 7 14 chr17 19886758 19887054 -69617499 - AluJb SINE Alu -18 294 1 471 258 37 88 chr17 19887065 19887360 -69617193 + L2 LINE L2 1812 2091 -1223 741 154 77 7 chr17 19887446 19887589 -69616964 - FRAM SINE Alu -24 152 1 2120 199 56 5 chr17 19887638 19888069 -69616484 - LTR40c LTR ERVL -12 453 1 685 304 15 0 chr17 19888249 19888450 -69616103 - MIR SINE MIR -12 250 47 1803 185 0 3 chr17 19888476 19888768 -69615785 - AluJb SINE Alu -21 291 1 2274 99 0 7 chr17 19888778 19889072 -69615481 - AluSc SINE Alu -17 292 1 301 306 103 32 chr17 19889100 19889501 -69615052 + L2 LINE L2 2566 3050 -222 305 359 95 26 chr17 19889583 19889887 -69614666 + L2 LINE L2 2943 3267 -5 224 275 25 50 chr17 19889975 19890055 -69614498 - L2 LINE L2 -1371 1943 1866 22 35 0 0 chr17 19890428 19890457 -69614096 + AT_rich Low_complexity Low_complexity 1 29 0 2066 104 11 0 chr17 19890536 19890814 -69613739 + AluSq SINE Alu 1 281 -32 2220 118 0 16 chr17 19890842 19891156 -69613397 + AluSc SINE Alu 1 309 0 296 309 43 29 chr17 19891170 19891309 -69613244 - MIR SINE MIR -73 189 49 2028 146 0 14 chr17 19891364 19891659 -69612894 + AluJo SINE Alu 1 291 -21 2331 69 0 69 chr17 19891848 19892182 -69612371 + AluY SINE Alu 1 311 0 708 163 114 24 chr17 19892624 19892790 -69611763 - MER5A DNA MER1_type -2 187 7 354 143 0 0 chr17 19892940 19893017 -69611536 + (CA)n Simple_repeat Simple_repeat 2 78 0 2796 82 40 72 chr17 19893041 19893503 -69611050 + MER31A LTR ERV1 1 476 -9 1974 152 76 17 chr17 19893503 19893911 -69610642 - MSTB1 LTR MaLR 0 432 1 2796 82 40 72 chr17 19893911 19893930 -69610623 + MER31A LTR ERV1 476 469 -16 2541 47 7 13 chr17 19893930 19894230 -69610323 - AluY SINE Alu -13 298 1 2796 82 40 72 chr17 19894230 19894248 -69610305 + MER31A LTR ERV1 468 485 0 2089 137 0 3 chr17 19894345 19894671 -69609882 - AluSx SINE Alu 0 312 1 207 302 0 0 chr17 19894727 19894790 -69609763 + L3 LINE CR1 798 860 -717 335 323 55 24 chr17 19895333 19895497 -69609056 - L1MC5 LINE L1 -26 7935 7767 351 277 163 60 chr17 19895542 19895772 -69608781 - L1ME3A LINE L1 -223 5947 5742 2341 92 0 3 chr17 19895772 19896064 -69608489 - AluSc SINE Alu -18 291 1 351 277 163 60 chr17 19896064 19896313 -69608240 - L1ME3A LINE L1 -428 5742 5419 1867 155 3 40 chr17 19896324 19896678 -69607875 + MLT1A2-int LTR MaLR 1395 1735 0 1142 203 86 45 chr17 19896678 19897037 -69607516 + MLT1A2 LTR MaLR 1 374 0 291 265 20 10 chr17 19897038 19897140 -69607413 - L1ME3A LINE L1 -763 5407 5305 2113 203 56 8 chr17 19897141 19897620 -69606933 - MLT1D LTR MaLR -2 503 2 3056 132 6 0 chr17 19897668 19898159 -69606394 + L1MB2 LINE L1 5481 5974 -209 825 183 0 0 chr17 19898159 19898285 -69606268 + FLAM_C SINE Alu 1 126 -17 358 213 46 28 chr17 19898296 19898404 -69606149 + L1MB2 LINE L1 5954 6063 -108 708 171 0 68 chr17 19898404 19898486 -69606067 + L1MB3 LINE L1 6020 6085 -98 2310 83 35 0 chr17 19898486 19898774 -69605779 + AluSx SINE Alu 1 298 -14 708 171 0 68 chr17 19898774 19898867 -69605686 + L1MB3 LINE L1 6085 6183 0 1717 192 34 0 chr17 19898943 19899240 -69605313 - AluJo SINE Alu -5 307 1 271 311 27 122 chr17 19899240 19899568 -69604985 - L2 LINE L2 -10 3262 2966 1957 158 7 3 chr17 19900004 19900307 -69604246 - AluJo SINE Alu -8 304 1 1846 155 0 51 chr17 19900999 19901166 -69603387 - AluJo SINE Alu -12 300 155 2375 92 3 0 chr17 19901166 19901459 -69603094 - AluSx SINE Alu -17 295 2 1846 155 0 51 chr17 19901459 19901607 -69602946 - AluJo SINE Alu -157 155 1 1015 196 19 19 chr17 19901934 19902143 -69602410 + MER20 DNA MER1_type 11 219 0 732 255 166 18 chr17 19902266 19902603 -69601950 + MLT1J2 LTR MaLR 62 448 -2 1512 221 104 27 chr17 19902872 19903314 -69601239 + MLT2B1 LTR ERVL 4 487 -33 402 21 0 0 chr17 19903314 19903361 -69601192 + (CA)n Simple_repeat Simple_repeat 2 48 0 1512 221 104 27 chr17 19903361 19903398 -69601155 + MLT2B1 LTR ERVL 487 520 0 360 274 117 89 chr17 19903398 19903646 -69600907 - MLT1K LTR MaLR -22 566 312 2272 118 0 7 chr17 19904143 19904447 -69600106 - AluSx SINE Alu -10 302 1 2520 81 3 0 chr17 19904455 19904763 -69599790 - AluSp SINE Alu -4 309 1 391 289 38 25 chr17 19904764 19904923 -69599630 + L2 LINE L2 3113 3273 -40 216 0 0 0 chr17 19905882 19905906 -69598647 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2265 97 0 0 chr17 19905910 19906189 -69598364 - AluSg SINE Alu -31 279 1 2310 114 7 0 chr17 19906335 19906642 -69597911 - AluSq SINE Alu -4 309 1 2110 130 28 33 chr17 19906857 19907248 -69597305 - MLT1B LTR MaLR 0 390 2 1143 232 114 4 chr17 19907250 19907530 -69597023 - MLT1B-int LTR MaLR -1 1370 1060 466 198 52 35 chr17 19907808 19907924 -69596629 + L2 LINE L2 3196 3313 0 660 174 102 12 chr17 19908591 19908758 -69595795 + MER5A DNA MER1_type 4 185 -4 186 300 0 0 chr17 19908762 19908812 -69595741 - MIR SINE MIR -166 96 47 858 299 170 22 chr17 19908964 19909233 -69595320 + L2 LINE L2 2848 3076 -237 1462 117 180 0 chr17 19909233 19909366 -69595187 - AluSx SINE Alu 0 302 194 180 0 0 0 chr17 19909366 19909386 -69595167 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1462 117 180 0 chr17 19909386 19909508 -69595045 - AluSx SINE Alu -108 194 1 858 299 170 22 chr17 19909508 19909643 -69594910 + L2 LINE L2 3076 3312 -1 2375 88 3 0 chr17 19909890 19910185 -69594368 - AluSx SINE Alu -16 296 1 3680 194 41 41 chr17 19910191 19910758 -69593795 - L1MB2 LINE L1 0 6171 5605 1654 179 54 0 chr17 19910758 19911038 -69593515 - AluJo SINE Alu -17 295 1 3680 194 41 41 chr17 19911038 19911305 -69593248 - L1MB2 LINE L1 -566 5605 5334 2135 120 0 7 chr17 19911305 19911613 -69592940 - AluY SINE Alu -5 306 1 3680 194 41 41 chr17 19911613 19911654 -69592899 - L1MB2 LINE L1 -836 5335 5295 694 291 35 0 chr17 19911692 19911919 -69592634 - MIR SINE MIR -12 250 16 186 291 51 43 chr17 19912014 19912131 -69592422 + MIR3 SINE MIR 8 125 -83 1587 189 46 4 chr17 19913165 19913446 -69591107 + AluJo SINE Alu 1 293 -19 479 253 70 22 chr17 19913770 19913992 -69590561 - MER67D LTR ERV1 -6 537 273 * 1274 215 37 100 chr17 19913961 19914363 -69590190 - MER67B LTR ERV1 -252 409 147 1656 165 0 46 chr17 19914363 19914666 -69589887 - AluJo SINE Alu -23 289 1 1274 215 37 100 chr17 19914666 19914805 -69589748 - MER67B LTR ERV1 -514 147 1 1992 159 18 0 chr17 19914829 19915162 -69589391 - L1MB3 LINE L1 -7 6176 5838 1821 115 0 0 chr17 19915199 19915434 -69589119 + AluSq SINE Alu 14 248 -65 752 176 8 8 chr17 19915787 19915918 -69588635 + FLAM_C SINE Alu 3 133 0 2241 108 10 3 chr17 19916009 19916316 -69588237 + AluSx SINE Alu 1 309 -3 4450 162 18 36 chr17 19916326 19916675 -69587878 + L1MB5 LINE L1 5333 5687 -487 1502 196 0 58 chr17 19916675 19916766 -69587787 - AluJo SINE Alu -18 294 199 2209 88 3 3 chr17 19916766 19917050 -69587503 - AluSp SINE Alu -10 303 20 1502 196 0 58 chr17 19917050 19917270 -69587283 - AluJo SINE Alu -113 199 1 4450 162 18 36 chr17 19917270 19917758 -69586795 + L1MB5 LINE L1 5687 6155 -19 333 0 0 0 chr17 19917762 19917799 -69586754 + (CA)n Simple_repeat Simple_repeat 2 38 0 2266 101 0 3 chr17 19918268 19918566 -69585987 - AluSx SINE Alu -15 297 1 1894 179 33 74 chr17 19918622 19919109 -69585444 - MLT1C LTR MaLR 0 467 1 252 247 67 0 chr17 19919226 19919315 -69585238 + L1MA9 LINE L1 5987 6081 -231 513 195 81 16 chr17 19919318 19919441 -69585112 + L1MA9 LINE L1 6181 6311 -1 2858 151 14 12 chr17 19920201 19920685 -69583868 + MER31A LTR ERV1 1 485 0 816 112 0 0 chr17 19921134 19921241 -69583312 + AluSq/x SINE Alu 1 107 -206 2338 72 0 33 chr17 19921943 19922247 -69582306 - AluY SINE Alu -17 294 1 279 0 0 0 chr17 19922689 19922720 -69581833 + (CA)n Simple_repeat Simple_repeat 1 31 0 1014 215 0 6 chr17 19922882 19923059 -69581494 - MER41D LTR ERV1 0 557 382 2188 99 14 3 chr17 19923090 19923384 -69581169 + AluSx SINE Alu 1 297 -15 2120 90 45 3 chr17 19923533 19923821 -69580732 + AluSg SINE Alu 1 300 -10 236 75 0 25 chr17 19923869 19923909 -69580644 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1045 8 25 0 chr17 19923909 19924027 -69580526 - MER107 DNA MER1_type -52 145 25 1881 139 11 0 chr17 19924027 19924301 -69580252 + AluSg SINE Alu 1 277 -33 1611 149 4 37 chr17 19924307 19924576 -69579977 - AluJo SINE Alu -52 260 1 1024 248 99 40 chr17 19924584 19925126 -69579427 - L1MEc LINE L1 -3528 2687 2156 * 1245 253 93 63 chr17 19925125 19925577 -69578976 + L1MC5 LINE L1 5729 6166 -1642 1635 222 126 28 chr17 19925577 19926037 -69578516 - MLT1D LTR MaLR 0 505 1 1245 253 93 63 chr17 19926037 19926850 -69577703 + L1MC5 LINE L1 6166 6927 -881 2228 89 0 10 chr17 19927530 19927863 -69576690 + AluSc SINE Alu 1 309 0 1677 85 0 0 chr17 19927866 19928078 -69576475 + AluSg/x SINE Alu 89 300 -10 929 149 238 14 chr17 19928631 19928845 -69575708 - MER58B DNA MER1_type -1 340 79 561 138 23 0 chr17 19929187 19929274 -69575279 - FAM SINE Alu -27 158 70 257 239 28 42 chr17 19929739 19929810 -69574743 + L2 LINE L2 3196 3265 -7 194 118 88 0 chr17 19929786 19929820 -69574733 - L2 LINE L2 -7 3306 3270 * 2217 84 3 16 chr17 19929848 19930156 -69574397 - AluSc SINE Alu -5 304 1 1201 140 9 50 chr17 19930204 19930426 -69574127 - MER2 DNA MER2_type -131 214 2 236 304 87 17 chr17 19930432 19930547 -69574006 - L3 LINE CR1 -476 1101 979 1214 122 0 58 chr17 19930884 19931089 -69573464 + LTR9B LTR ERV1 452 644 0 353 206 41 52 chr17 19931089 19931186 -69573367 + HUERS-P3b LTR ERV1 1 96 -7322 440 135 360 0 chr17 19931189 19931300 -69573253 + HUERS-P3b LTR ERV1 409 559 -6859 6923 118 15 7 chr17 19931312 19933073 -69571480 + HUERS-P3b LTR ERV1 747 2658 -4760 2067 209 31 3 chr17 19933073 19933461 -69571092 - LTR8 LTR ERV1 -292 399 1 1890 122 0 0 chr17 19933474 19933728 -69570825 + AluSg SINE Alu 53 306 -4 6113 79 10 9 chr17 19933728 19934526 -69570027 + HUERS-P3b LTR ERV1 3076 3874 -3544 * 16085 98 28 23 chr17 19934517 19934639 -69569914 + HUERS-P3b LTR ERV1 4713 4833 -2585 2395 86 3 0 chr17 19934639 19934941 -69569612 + AluSp SINE Alu 1 303 -10 16085 98 28 23 chr17 19934941 19937429 -69567124 + HUERS-P3b LTR ERV1 4833 7411 -7 3344 109 57 24 chr17 19937430 19937970 -69566583 + LTR9B LTR ERV1 1 558 -86 195 357 71 0 chr17 19938149 19938247 -69566306 + MIR SINE MIR 33 137 -125 1526 236 157 108 chr17 19938970 19939861 -69564692 + L1MC4 LINE L1 6737 7707 -335 2329 74 0 10 chr17 19939861 19940158 -69564395 + AluY SINE Alu 3 296 -15 1526 236 157 108 chr17 19940158 19940512 -69564041 + L1MC4 LINE L1 7707 8042 0 206 259 164 43 chr17 19941313 19941429 -69563124 - L2 LINE L2 0 3313 3184 1234 199 34 21 chr17 19942677 19942913 -69561640 - MER8 DNA MER2_type 0 239 1 23 0 0 0 chr17 19944773 19944796 -69559757 + AT_rich Low_complexity Low_complexity 1 23 0 600 251 89 34 chr17 19945238 19945417 -69559136 + MER5A DNA MER1_type 1 189 0 1730 137 107 0 chr17 19945546 19945817 -69558736 - AluSx SINE Alu -12 300 1 1971 153 0 3 chr17 19945980 19946281 -69558272 + AluSx SINE Alu 1 300 -12 423 158 12 37 chr17 19946287 19946369 -69558184 - MER116 DNA Mariner 0 80 1 830 226 139 62 chr17 19946411 19946734 -69557819 - MER7A DNA MER2_type 0 346 1 360 0 0 0 chr17 19946945 19946985 -69557568 + (CA)n Simple_repeat Simple_repeat 2 41 0 270 73 0 0 chr17 19947495 19947536 -69557017 + (CA)n Simple_repeat Simple_repeat 2 42 0 23 97 0 0 chr17 19947868 19947940 -69556613 + AT_rich Low_complexity Low_complexity 1 72 0 2429 75 7 0 chr17 19948195 19948489 -69556064 - AluSp SINE Alu -17 296 1 249 309 49 25 chr17 19948646 19948727 -69555826 - L2 LINE L2 -188 3084 3002 493 280 100 87 chr17 19948917 19949388 -69555165 + L1MEd LINE L1 112 588 -5531 1608 168 27 27 chr17 19949646 19949943 -69554610 - AluJb SINE Alu -15 297 1 1761 166 14 0 chr17 19950044 19950322 -69554231 + AluJo SINE Alu 3 284 -28 260 0 57 0 chr17 19950329 19950364 -69554189 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 619 220 245 17 chr17 19950372 19950613 -69553940 + L1MC4a LINE L1 5879 6174 -1634 2620 243 141 74 chr17 19950659 19950916 -69553637 + L1MC4 LINE L1 6345 6583 -1459 324 0 0 0 chr17 19950916 19950952 -69553601 + (CA)n Simple_repeat Simple_repeat 2 37 0 2620 243 141 74 chr17 19950952 19951304 -69553249 + L1MC4 LINE L1 6583 6910 -1132 2157 121 0 30 chr17 19951304 19951609 -69552944 - AluSx SINE Alu -16 296 1 2620 243 141 74 chr17 19951609 19951658 -69552895 + L1MC4 LINE L1 6910 6954 -1088 207 0 0 0 chr17 19951658 19951681 -69552872 + (TA)n Simple_repeat Simple_repeat 1 23 0 2620 243 141 74 chr17 19951681 19951702 -69552851 + L1MC4 LINE L1 6954 6972 -1070 2338 92 0 0 chr17 19951702 19951995 -69552558 - AluSg SINE Alu -17 293 1 2620 243 141 74 chr17 19951995 19952069 -69552484 + L1MC4 LINE L1 6972 7040 -1002 2368 97 0 0 chr17 19952069 19952369 -69552184 + AluYa5 SINE Alu 1 300 -11 2620 243 141 74 chr17 19952369 19952381 -69552172 + L1MC4 LINE L1 7040 7050 -992 2239 105 7 0 chr17 19952381 19952685 -69551868 + AluSq SINE Alu 1 306 -7 2620 243 141 74 chr17 19952685 19953504 -69551049 + L1MC4 LINE L1 7050 8040 -2 538 234 113 11 chr17 19953539 19953721 -69550832 + L1MC4a LINE L1 5741 5947 -223 28 102 0 0 chr17 19953966 19954064 -69550489 + AT_rich Low_complexity Low_complexity 1 98 0 228 337 35 23 chr17 19955262 19955348 -69549205 - L3 LINE CR1 -7 1570 1484 230 217 0 0 chr17 19955456 19955502 -69549051 - Alu SINE Alu -175 127 82 1659 191 3 7 chr17 19955566 19955849 -69548704 - AluJo SINE Alu -30 282 1 453 108 0 0 chr17 19956119 19956184 -69548369 - AluSx SINE Alu -6 305 241 1369 109 0 6 chr17 19956184 19956367 -69548186 - AluSx SINE Alu -130 182 1 889 129 8 8 chr17 19956420 19956544 -69548009 + FLAM_C SINE Alu 1 124 -9 228 143 0 0 chr17 19956766 19956808 -69547745 + (TA)n Simple_repeat Simple_repeat 1 42 0 2094 122 0 0 chr17 19957052 19957340 -69547213 + AluSx SINE Alu 1 288 -24 444 266 146 26 chr17 19957413 19957646 -69546907 - MIR SINE MIR 0 262 2 938 81 0 0 chr17 19961003 19961126 -69543427 - AluSg/x SINE Alu -2 308 186 1595 261 102 6 chr17 19961252 19961723 -69542830 - MLT1G LTR MaLR 0 590 75 2324 84 0 32 chr17 19961808 19962119 -69542434 + AluSx SINE Alu 1 301 -11 1330 233 51 36 chr17 19962128 19962519 -69542034 + MLT2C1 LTR ERVL 1 397 0 352 280 70 19 chr17 19962557 19962714 -69541839 + L1M4 LINE L1 2382 2546 -3600 940 342 23 12 chr17 19962739 19963166 -69541387 + LTR16A LTR ERVL 19 450 0 688 286 19 66 chr17 19963166 19963211 -69541342 + HERV16 LTR ERVL 1 47 -4949 2067 109 0 7 chr17 19963211 19963496 -69541057 - AluSx SINE Alu -17 295 13 688 286 19 66 chr17 19963496 19963768 -69540785 + HERV16 LTR ERVL 47 303 -4693 1890 304 67 47 chr17 19963859 19964384 -69540169 + HERV16 LTR ERVL 469 982 -4014 2383 99 0 3 chr17 19964384 19964698 -69539855 + AluSq SINE Alu 1 313 0 1890 304 67 47 chr17 19964698 19965258 -69539295 + HERV16 LTR ERVL 982 1576 -3420 1805 265 76 38 chr17 19965339 19965538 -69539015 + HERV16 LTR ERVL 1751 1941 -3055 2463 72 0 3 chr17 19965538 19965842 -69538711 + AluY SINE Alu 1 303 -8 1805 265 76 38 chr17 19965842 19966298 -69538255 + HERV16 LTR ERVL 1941 2431 -2565 2617 312 80 34 chr17 19966402 19966576 -69537977 + HERV16 LTR ERVL 2755 2920 -2734 2200 108 3 7 chr17 19966576 19966872 -69537681 - AluSg SINE Alu -15 295 1 2617 312 80 34 chr17 19966872 19967389 -69537164 + HERV16 LTR ERVL 2920 3412 -2242 2487 152 55 123 chr17 19967389 19967647 -69536906 - MER74A LTR ERVL 0 558 284 2320 95 0 3 chr17 19967647 19967943 -69536610 - AluSg SINE Alu -15 295 1 2487 152 55 123 chr17 19967943 19968283 -69536270 - MER74A LTR ERVL -274 284 1 2617 312 80 34 chr17 19968283 19968736 -69535817 + HERV16 LTR ERVL 3412 3843 -1811 1986 157 105 14 chr17 19968736 19969099 -69535454 - MSTD LTR MaLR 0 396 1 2617 312 80 34 chr17 19969099 19969528 -69535025 + HERV16 LTR ERVL 3843 4402 -1252 6288 141 8 15 chr17 19969745 19970270 -69534283 - L1MA7 LINE L1 0 6291 5764 2253 101 10 0 chr17 19970270 19970567 -69533986 - AluSc SINE Alu -9 300 1 6288 141 8 15 chr17 19970567 19971387 -69533166 - L1MA7 LINE L1 -527 5764 4959 578 283 30 34 chr17 19971517 19971754 -69532799 + L1MC4a LINE L1 7082 7317 -491 1940 155 100 50 chr17 19971758 19971983 -69532570 - MSTB1 LTR MaLR -13 419 163 2463 35 0 3 chr17 19971983 19972323 -69532230 + AluY SINE Alu 1 339 0 1940 155 100 50 chr17 19972323 19972495 -69532058 - MSTB1 LTR MaLR -269 163 1 318 301 44 0 chr17 19972498 19972611 -69531942 + L1MC4 LINE L1 7396 7513 -529 581 266 63 36 chr17 19972700 19973034 -69531519 + L1MC4 LINE L1 7561 7903 -139 267 103 0 0 chr17 19973038 19973077 -69531476 + (TG)n Simple_repeat Simple_repeat 2 40 0 2215 100 13 0 chr17 19973358 19973657 -69530896 + AluSc SINE Alu 1 303 -6 1293 218 61 58 chr17 19973977 19974340 -69530213 + MLT1A1 LTR MaLR 2 365 0 392 271 42 17 chr17 19974602 19974720 -69529833 - MIR SINE MIR -123 139 19 2275 77 7 3 chr17 19974859 19975157 -69529396 + AluSq SINE Alu 2 300 -13 738 266 43 3 chr17 19975375 19975657 -69528896 + L1 LINE L1 3108 3400 -2746 721 126 47 0 chr17 19976098 19976225 -69528328 + FLAM_C SINE Alu 1 133 0 2484 70 0 3 chr17 19976551 19976853 -69527700 - AluSg SINE Alu -8 302 2 28 61 0 0 chr17 19976941 19976990 -69527563 + AT_rich Low_complexity Low_complexity 1 49 0 314 248 168 29 chr17 19977171 19977308 -69527245 + L1ME LINE L1 335 490 -5580 2067 143 3 0 chr17 19977728 19978029 -69526524 + AluSx SINE Alu 2 303 -9 222 306 20 51 chr17 19978337 19978435 -69526118 + L2 LINE L2 2323 2417 -897 222 118 0 0 chr17 19979332 19979366 -69525187 + (T)n Simple_repeat Simple_repeat 1 34 0 1459 97 14 5 chr17 19980069 19980276 -69524277 - AluSc SINE Alu -15 294 86 1018 98 0 0 chr17 19980935 19981068 -69523485 - AluSq/x SINE Alu -180 133 1 6291 230 40 87 chr17 19981115 19981571 -69522982 + L1M4 LINE L1 2656 3132 -3014 2146 161 66 21 chr17 19981571 19981950 -69522603 + MSTD LTR MaLR 1 396 0 6291 230 40 87 chr17 19981950 19982316 -69522237 + L1M4 LINE L1 3132 3514 -2632 1908 84 0 24 chr17 19982316 19982567 -69521986 - AluSc SINE Alu -26 283 39 6291 230 40 87 chr17 19982567 19982636 -69521917 + L1M4 LINE L1 3514 3585 -2561 2429 90 0 0 chr17 19982636 19982936 -69521617 - AluSg SINE Alu -10 300 1 6291 230 40 87 chr17 19982936 19983893 -69520660 + L1M4 LINE L1 3585 4585 -1561 1739 156 3 7 chr17 19983893 19984219 -69520334 + AluJb SINE Alu 3 327 0 6291 230 40 87 chr17 19984219 19984472 -69520081 + L1M4 LINE L1 4585 4848 -1298 1549 181 3 66 chr17 19984472 19984792 -69519761 + AluJo SINE Alu 6 305 -7 6291 230 40 87 chr17 19984792 19984919 -69519634 + L1M4 LINE L1 4848 4979 -1167 4687 136 32 73 chr17 19984919 19985850 -69518703 + L1MA4 LINE L1 5408 6300 0 6291 230 40 87 chr17 19985850 19986253 -69518300 + L1M4 LINE L1 4979 5169 -977 1297 132 0 44 chr17 19986280 19986484 -69518069 + AluSg/x SINE Alu 101 295 -17 316 231 20 68 chr17 19986490 19986570 -69517983 + L1M4 LINE L1 5157 5228 -918 1597 183 111 63 chr17 19986570 19986906 -69517647 - MSTD LTR MaLR 0 396 38 2175 100 0 7 chr17 19986906 19987212 -69517341 + AluSg SINE Alu 1 304 0 1597 183 111 63 chr17 19987212 19987252 -69517301 - MSTD LTR MaLR -358 38 1 316 231 20 68 chr17 19987252 19987318 -69517235 + L1M4 LINE L1 5228 5296 -850 1934 130 28 87 chr17 19987320 19987468 -69517085 + L1MB5 LINE L1 5789 5944 -230 2388 88 0 3 chr17 19987468 19987776 -69516777 + AluSc SINE Alu 1 307 -2 1934 130 28 87 chr17 19987776 19988019 -69516534 + L1MB5 LINE L1 5944 6157 -17 708 180 43 7 chr17 19988046 19988185 -69516368 - MSTD LTR MaLR -249 147 4 1535 154 122 0 chr17 19989840 19990126 -69514427 + MSTB1 LTR MaLR 99 419 -13 2135 74 49 7 chr17 19990176 19990461 -69514092 - AluSg SINE Alu -13 297 1 2040 154 102 0 chr17 19990603 19990966 -69513587 + MSTC LTR MaLR 29 428 0 1983 153 17 11 chr17 19993128 19993481 -69511072 + L1MC1 LINE L1 5789 6143 -190 3326 159 12 2 chr17 19993498 19994058 -69510495 - L1MB3 LINE L1 -45 6138 5573 2735 108 5 0 chr17 19994075 19994462 -69510091 + L1PB3 LINE L1 5440 5828 -326 894 143 11 53 chr17 19994460 19994662 -69509891 - L1MB3 LINE L1 -690 5490 5293 * 5781 138 52 13 chr17 19994699 19994815 -69509738 - L1MA8 LINE L1 -5 6286 6176 2436 84 0 0 chr17 19994815 19995112 -69509441 - AluSp SINE Alu -16 297 1 5781 138 52 13 chr17 19995112 19997026 -69507527 - L1MA8 LINE L1 -115 6176 4120 257 191 0 107 chr17 19997019 19997103 -69507450 + L1MC/D LINE L1 5684 5758 -601 * 328 238 119 19 chr17 19997131 19997291 -69507262 - L1ME4a LINE L1 -237 5884 5709 403 282 117 29 chr17 19999298 19999504 -69505049 + L1ME LINE L1 5519 5742 -379 1160 259 150 13 chr17 19999566 19999945 -69504608 - LTR16A LTR ERVL -5 445 15 428 212 59 0 chr17 20000694 20000779 -69503774 - Tigger5 DNA MER2_type 0 2323 2234 383 161 0 0 chr17 20000784 20000840 -69503713 - Tigger5 DNA MER2_type -2267 56 1 852 291 120 48 chr17 20000985 20001688 -69502865 + L1MEc LINE L1 856 1671 -4725 2514 54 0 16 chr17 20001688 20002004 -69502549 + AluY SINE Alu 1 311 0 852 291 120 48 chr17 20002004 20002413 -69502140 + L1MEc LINE L1 1671 2049 -4347 684 115 64 70 chr17 20002433 20002468 -69502085 - Charlie1 DNA MER1_type -6 2755 2721 2413 79 7 7 chr17 20002468 20002772 -69501781 - AluSp SINE Alu -9 304 1 684 115 64 70 chr17 20002772 20002893 -69501660 - Charlie1 DNA MER1_type -40 2721 2600 1985 121 21 3 chr17 20002895 20003184 -69501369 + AluY SINE Alu 1 294 -17 1019 227 36 73 chr17 20003184 20003395 -69501158 + L1MEc LINE L1 2660 2853 -3362 1990 136 0 11 chr17 20003395 20003736 -69500817 + AluSx SINE Alu 1 338 0 1019 227 36 73 chr17 20003736 20003907 -69500646 + L1MEc LINE L1 2853 3029 -3186 2971 230 59 21 chr17 20003919 20004406 -69500147 + L1ME1 LINE L1 4980 5447 -719 2123 107 0 23 chr17 20004406 20004716 -69499837 + AluSc SINE Alu 1 303 -6 2971 230 59 21 chr17 20004716 20005375 -69499178 + L1ME1 LINE L1 5447 6161 -5 763 284 91 54 chr17 20005379 20006235 -69498318 + L1MEc LINE L1 3029 3916 -2299 1604 121 78 53 chr17 20006240 20006436 -69498117 + L1MB3 LINE L1 5847 6056 -127 2407 71 0 0 chr17 20006436 20006733 -69497820 - AluY SINE Alu -14 297 1 1604 121 78 53 chr17 20006733 20006858 -69497695 + L1MB3 LINE L1 6056 6176 -7 1090 229 155 28 chr17 20006870 20007287 -69497266 + L1MEc LINE L1 3909 4410 -1805 411 21 0 0 chr17 20007287 20007335 -69497218 + (TA)n Simple_repeat Simple_repeat 2 49 0 1090 229 155 28 chr17 20007335 20007453 -69497100 + L1MEc LINE L1 4410 4512 -1703 207 0 0 0 chr17 20007887 20007910 -69496643 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1232 124 142 31 chr17 20009445 20009670 -69494883 + AluSx SINE Alu 53 302 -10 405 275 41 45 chr17 20009693 20009921 -69494632 + L1MEc LINE L1 4562 4790 -1425 2514 138 65 14 chr17 20009921 20010334 -69494219 + Tigger2a DNA MER2_type 1 434 0 405 275 41 45 chr17 20010334 20010349 -69494204 + L1MEc LINE L1 4790 4804 -1411 1065 238 94 18 chr17 20010403 20010973 -69493580 + L1M3 LINE L1 4896 5513 -736 231 278 0 0 chr17 20012005 20012059 -69492494 + L2 LINE L2 3242 3295 -18 324 251 64 106 chr17 20012077 20012312 -69492241 - L1ME4a LINE L1 -2 6119 5895 525 274 58 90 chr17 20012340 20012991 -69491562 - L1ME4a LINE L1 -96 6025 5379 265 270 117 29 chr17 20013043 20013350 -69491203 + L1M4 LINE L1 4997 5330 -816 1590 118 9 64 chr17 20215163 20215492 -69289061 + AluSx SINE Alu 1 311 -1 342 229 125 62 chr17 20215671 20215815 -69288738 + MIR SINE MIR 3 155 -107 218 357 87 8 chr17 20215996 20216122 -69288431 + MIR SINE MIR 119 254 -8 1000 134 0 0 chr17 20216376 20216518 -69288035 - AluSg/x SINE Alu -15 297 156 364 276 31 0 chr17 20217131 20217229 -69287324 - MIR SINE MIR -122 140 40 1678 127 39 18 chr17 20217819 20218128 -69286425 - AluSx SINE Alu 0 315 1 270 212 71 12 chr17 20218942 20219027 -69285526 + MLT1C LTR MaLR 17 106 -399 1023 145 100 104 chr17 20219043 20219156 -69285397 + AluJo SINE Alu 1 113 -199 2185 68 10 14 chr17 20219156 20219449 -69285104 - AluSq SINE Alu -21 292 1 2398 62 3 3 chr17 20219455 20219760 -69284793 - AluY SINE Alu -6 305 1 1023 145 100 104 chr17 20219760 20219908 -69284645 + AluJo SINE Alu 118 268 -44 941 207 12 0 chr17 20219954 20220118 -69284435 + FRAM SINE Alu 1 166 0 423 194 231 36 chr17 20220118 20220365 -69284188 + MLT1C LTR MaLR 173 467 0 22 56 0 0 chr17 20220489 20220525 -69284028 + AT_rich Low_complexity Low_complexity 1 36 0 1803 128 7 11 chr17 20220528 20220809 -69283744 + AluSg SINE Alu 1 280 -30 21 57 0 0 chr17 20221359 20221394 -69283159 + GC_rich Low_complexity Low_complexity 1 35 0 222 310 0 60 chr17 20221546 20221646 -69282907 + MIR SINE MIR 60 153 -109 226 333 29 29 chr17 20222430 20222535 -69282018 - L2 LINE L2 -41 3231 3127 272 295 26 0 chr17 20222553 20222631 -69281922 - MIR SINE MIR -110 152 73 182 250 0 0 chr17 20222963 20223015 -69281538 + L3 LINE CR1 1423 1474 -103 308 261 65 0 chr17 20223549 20223641 -69280912 - MIR3 SINE MIR -49 159 62 346 289 19 10 chr17 20223775 20223879 -69280674 + MIR SINE MIR 17 121 -141 290 282 78 0 chr17 20224270 20224373 -69280180 - L2 LINE L2 -245 3027 2917 225 267 47 12 chr17 20225348 20225434 -69279119 - L2 LINE L2 -261 3011 2923 2123 103 3 7 chr17 20226852 20227143 -69277410 - AluSx SINE Alu -22 290 1 2091 100 0 7 chr17 20227150 20227454 -69277099 - AluSp SINE Alu 0 313 19 303 314 0 0 chr17 20230153 20230258 -69274295 + GA-rich Low_complexity Low_complexity 1 105 0 202 229 16 16 chr17 20231025 20231086 -69273467 + (CAGG)n Simple_repeat Simple_repeat 4 64 0 22 70 0 0 chr17 20232108 20232151 -69272402 + AT_rich Low_complexity Low_complexity 1 43 0 2279 82 7 7 chr17 20232425 20232731 -69271822 + AluY SINE Alu 1 306 -5 483 285 66 86 chr17 20233590 20233958 -69270595 - L1MCa LINE L1 -2732 3694 2194 488 180 0 50 chr17 20233968 20234068 -69270485 + AluSg/x SINE Alu 194 288 -22 1787 116 0 4 chr17 20234158 20234400 -69270153 - AluSx SINE Alu -71 241 1 269 194 113 0 chr17 20234426 20234488 -69270065 + MIR3 SINE MIR 86 154 -54 2356 85 0 0 chr17 20234838 20235132 -69269421 - AluSg SINE Alu -16 294 1 1702 145 76 0 chr17 20235136 20235412 -69269141 - AluJb SINE Alu -15 297 1 1662 78 9 0 chr17 20235421 20235638 -69268915 - AluSg/x SINE Alu -9 303 85 2258 95 0 3 chr17 20235641 20235946 -69268607 - AluSg SINE Alu -6 304 1 187 333 156 0 chr17 20236531 20236621 -69267932 + L2 LINE L2 3189 3292 -21 1384 164 25 12 chr17 20236621 20236865 -69267688 - AluSx SINE Alu -11 301 55 233 322 116 39 chr17 20239323 20239556 -69264997 + L2 LINE L2 2804 3054 -218 2246 71 3 3 chr17 20239568 20239863 -69264690 - AluY SINE Alu -16 295 1 316 312 136 16 chr17 20241952 20242077 -69262476 + MIR3 SINE MIR 55 194 -14 1492 154 56 25 chr17 20242178 20242464 -69262089 - AluJo SINE Alu -17 295 1 1665 185 48 0 chr17 20242474 20242766 -69261787 - AluSx SINE Alu -6 306 1 2061 126 10 0 chr17 20242774 20243075 -69261478 - AluSp SINE Alu -9 304 1 729 185 0 8 chr17 20244099 20244218 -69260335 + FLAM_C SINE Alu 1 118 -25 2229 107 3 0 chr17 20244225 20244525 -69260028 - AluSc SINE Alu -8 301 1 29 0 0 0 chr17 20244526 20244555 -69259998 + AT_rich Low_complexity Low_complexity 1 29 0 2310 77 3 7 chr17 20244983 20245293 -69259260 - AluY SINE Alu -2 309 1 847 178 41 0 chr17 20245303 20245449 -69259104 - AluJb SINE Alu -23 289 138 868 9 0 18 chr17 20245457 20245568 -69258985 + (TCTA)n Simple_repeat Simple_repeat 1 109 0 1753 130 50 11 chr17 20245568 20245836 -69258717 - AluSx SINE Alu -30 282 1 1924 128 31 0 chr17 20247195 20247484 -69257069 - AluSx SINE Alu -14 298 1 2152 153 239 29 chr17 20250328 20250787 -69253766 + L1MC3 LINE L1 6906 7267 -518 1812 141 10 35 chr17 20250787 20251099 -69253454 + AluSx SINE Alu 1 304 -8 2152 153 239 29 chr17 20251099 20251358 -69253195 + L1MC3 LINE L1 7267 7775 -10 190 299 52 41 chr17 20251385 20251482 -69253071 + MIR SINE MIR 21 118 -90 799 227 0 0 chr17 20251483 20251633 -69252920 + AluJo SINE Alu 114 263 -49 2100 90 22 4 chr17 20252857 20253134 -69251419 + AluSx SINE Alu 1 282 -30 2291 33 0 60 chr17 20253633 20253934 -69250619 - AluY SINE Alu -28 283 1 802 141 0 8 chr17 20253937 20254065 -69250488 - AluJo/FLAM SINE Alu -181 131 5 234 282 239 8 chr17 20254067 20254184 -69250369 + MIR SINE MIR 119 262 0 194 320 100 10 chr17 20254248 20254348 -69250205 + L2 LINE L2 3186 3294 -19 263 278 56 0 chr17 20254396 20254486 -69250067 - MIR3 SINE MIR -53 155 61 266 319 11 0 chr17 20257575 20257669 -69246884 + MIR SINE MIR 58 152 -56 191 175 75 0 chr17 20257724 20257764 -69246789 - MIR SINE MIR -73 135 93 2212 104 0 0 chr17 20260208 20260505 -69244048 + AluSc SINE Alu 1 297 -12 813 128 0 0 chr17 20260512 20260819 -69243734 + AluSp SINE Alu 1 307 0 1595 209 36 25 chr17 20260841 20261200 -69243353 - MLT1A1 LTR MaLR -2 363 1 2217 85 0 7 chr17 20261376 20261670 -69242883 - AluSc SINE Alu -17 292 1 337 243 93 28 chr17 20262192 20262299 -69242254 + MIR SINE MIR 113 226 -36 1166 188 58 0 chr17 20263236 20263459 -69241094 + AluJo SINE Alu 1 236 -76 495 160 0 0 chr17 20263473 20263548 -69241005 - AluJ/FLAM SINE Alu -220 92 18 1836 152 10 10 chr17 20263567 20263869 -69240684 - AluSx SINE Alu -10 302 1 2236 179 63 72 chr17 20264167 20264726 -69239827 - MLT2B3 LTR ERVL 0 554 1 2299 64 0 0 chr17 20265114 20265429 -69239124 + AluY SINE Alu 1 315 0 185 289 218 27 chr17 20268003 20268370 -69236183 + L2 LINE L2 2084 2520 -794 2176 78 7 14 chr17 20269491 20269784 -69234769 - AluSx SINE Alu -21 291 1 425 243 19 10 chr17 20271150 20271253 -69233300 - L2 LINE L2 -1 3271 3168 203 259 0 37 chr17 20271960 20272014 -69232539 - L2 LINE L2 0 3272 3221 221 30 61 0 chr17 20274237 20274270 -69230283 + (CAGG)n Simple_repeat Simple_repeat 4 38 0 2094 125 0 7 chr17 20276550 20276855 -69227698 + AluSg1 SINE Alu 3 305 -4 229 301 64 16 chr17 20276882 20276996 -69227557 - MIR3 SINE MIR -54 154 63 241 256 61 12 chr17 20278649 20278731 -69225822 + MIR SINE MIR 59 144 -118 214 333 14 0 chr17 20279599 20279668 -69224885 + MIR SINE MIR 62 131 -77 369 253 312 5 chr17 20279903 20280124 -69224429 + L2 LINE L2 2472 2760 -554 824 263 121 26 chr17 20280125 20280471 -69224082 + L2 LINE L2 2913 3291 -22 1840 145 14 17 chr17 20280814 20281110 -69223443 + AluJb SINE Alu 1 295 -17 222 289 0 0 chr17 20281541 20281593 -69222960 + MIR SINE MIR 87 138 -70 244 200 0 0 chr17 20281893 20281938 -69222615 - MIR SINE MIR -62 146 102 198 103 0 0 chr17 20281982 20282011 -69222542 + (CAGGG)n Simple_repeat Simple_repeat 3 31 0 358 243 30 30 chr17 20282195 20282364 -69222189 + (CAGAGA)n Simple_repeat Simple_repeat 2 170 0 268 207 44 44 chr17 20282593 20282728 -69221825 + (CCCGG)n Simple_repeat Simple_repeat 2 136 0 41 83 0 23 chr17 20282841 20282973 -69221580 + GC_rich Low_complexity Low_complexity 1 129 0 185 342 40 0 chr17 20283277 20283353 -69221200 + MIR SINE MIR 90 168 -94 212 352 48 0 chr17 20283383 20283508 -69221045 + L2 LINE L2 2894 3024 -248 398 317 32 0 chr17 20284046 20284169 -69220384 - MIR SINE MIR -19 243 117 194 245 75 0 chr17 20284252 20284305 -69220248 + MIR SINE MIR 16 72 -136 1647 136 13 53 chr17 20284332 20284634 -69219919 + AluJb SINE Alu 1 290 -22 1683 123 105 7 chr17 20284634 20284919 -69219634 + AluSq SINE Alu 1 313 0 705 190 0 14 chr17 20284923 20285065 -69219488 + MIR SINE MIR 51 190 -72 2740 83 33 7 chr17 20285065 20285451 -69219102 + MER41A LTR ERV1 1 400 -154 2107 110 7 0 chr17 20285451 20285743 -69218810 + AluSp SINE Alu 1 294 -19 2740 83 33 7 chr17 20285743 20285775 -69218778 + MER41A LTR ERV1 400 430 -124 2205 132 0 0 chr17 20285778 20286089 -69218464 - AluSx SINE Alu 0 312 2 2136 114 0 25 chr17 20286101 20286416 -69218137 - AluY SINE Alu -4 307 1 220 228 166 48 chr17 20286716 20286861 -69217692 + MER5A DNA MER1_type 5 166 -23 405 290 39 91 chr17 20287413 20287556 -69216997 + MIR SINE MIR 31 159 -103 2135 93 0 3 chr17 20287556 20287847 -69216706 + AluY SINE Alu 1 290 -21 405 290 39 91 chr17 20287847 20287934 -69216619 + MIR SINE MIR 159 249 -13 1971 109 23 46 chr17 20287951 20288255 -69216298 + AluSg SINE Alu 1 297 -13 2115 103 6 58 chr17 20288271 20288406 -69216147 + AluSx SINE Alu 1 141 -171 1810 147 23 3 chr17 20288406 20288712 -69215841 + AluSq SINE Alu 2 313 0 2115 103 6 58 chr17 20288712 20288905 -69215648 + AluSx SINE Alu 141 312 0 274 295 66 43 chr17 20289674 20289845 -69214708 - MIR3 SINE MIR -17 191 16 249 180 33 16 chr17 20290057 20290118 -69214435 + MIR SINE MIR 102 163 -99 * 524 170 36 40 chr17 20290107 20290288 -69214265 - MIR SINE MIR -2 260 33 2292 75 0 40 chr17 20291013 20291335 -69213218 - AluSc SINE Alu 0 309 1 305 107 0 36 chr17 20291335 20291391 -69213162 + (TTTTC)n Simple_repeat Simple_repeat 5 58 0 2063 133 10 0 chr17 20291401 20291703 -69212850 - AluSq SINE Alu -8 305 1 199 185 169 0 chr17 20291734 20291799 -69212754 + L2 LINE L2 2671 2746 -568 1135 157 129 11 chr17 20291808 20292094 -69212459 - MER63 DNA MER1_type -1 1061 742 442 186 23 23 chr17 20292099 20292185 -69212368 - FRAM/FAM SINE Alu -90 86 1 387 184 29 0 chr17 20292202 20292305 -69212248 - Charlie5 DNA MER1_type -27 2585 2480 931 79 0 8 chr17 20292307 20292434 -69212119 - AluSg/x SINE Alu -8 304 179 731 152 74 29 chr17 20292459 20292481 -69212072 - MER33 DNA MER1_type -97 65 45 1664 139 65 24 chr17 20292481 20292775 -69211778 - AluSx SINE Alu -6 306 1 731 152 74 29 chr17 20292775 20292959 -69211594 - MER33 DNA MER1_type -117 45 1 227 140 18 0 chr17 20292952 20292979 -69211574 - MER63 DNA MER1_type -405 656 631 * 2195 96 20 3 chr17 20292979 20293280 -69211273 + AluY SINE Alu 1 306 -5 227 140 18 0 chr17 20293280 20293309 -69211244 - MER63 DNA MER1_type -430 631 599 799 133 25 0 chr17 20293595 20293715 -69210838 - AluSq/x SINE Alu -190 123 1 238 349 57 9 chr17 20294714 20294820 -69209733 + MIR SINE MIR 82 192 -70 2196 112 3 0 chr17 20294830 20295135 -69209418 - AluSx SINE Alu -6 306 1 298 308 108 15 chr17 20295639 20295769 -69208784 - MIR SINE MIR -73 189 48 2244 73 0 42 chr17 20295994 20296307 -69208246 - AluY SINE Alu -11 300 1 2152 122 0 0 chr17 20296313 20296616 -69207937 - AluSg SINE Alu -7 303 1 803 224 93 24 chr17 20297800 20298005 -69206548 + MER20 DNA MER1_type 1 219 0 349 371 114 15 chr17 20298136 20298408 -69206145 + L2 LINE L2 2969 3267 -5 291 326 155 5 chr17 20298403 20298590 -69205963 - MIR SINE MIR -1 261 47 * 28 0 0 0 chr17 20299986 20300014 -69204539 + AT_rich Low_complexity Low_complexity 1 28 0 327 121 0 0 chr17 20301014 20301072 -69203481 + (CGG)n Simple_repeat Simple_repeat 1 58 0 1767 115 42 11 chr17 20302532 20302819 -69201734 + AluJb SINE Alu 2 297 -15 201 147 0 0 chr17 20303115 20303149 -69201404 + (CCCCCT)n Simple_repeat Simple_repeat 5 38 0 1661 135 31 24 chr17 20303152 20303441 -69201112 - AluJb SINE Alu -21 291 1 916 237 66 0 chr17 20303466 20303677 -69200876 - MIR SINE MIR -15 247 23 197 328 103 60 chr17 20304310 20304612 -69199941 + L2 LINE L2 2466 2780 -534 2092 128 0 0 chr17 20304613 20304909 -69199644 - AluSx SINE Alu -16 296 1 2006 131 13 0 chr17 20304922 20305228 -69199325 - AluSx SINE Alu -2 310 1 180 359 16 0 chr17 20305423 20305487 -69199066 + L2 LINE L2 3249 3313 0 361 238 0 12 chr17 20305624 20305708 -69198845 - L2 LINE L2 -1 3312 3230 235 279 49 66 chr17 20305707 20305829 -69198724 + L2 LINE L2 2940 3059 -213 * 209 266 89 13 chr17 20306438 20306517 -69198036 - MIR SINE MIR -69 139 55 490 281 7 40 chr17 20306804 20307016 -69197537 + MIR SINE MIR 3 206 -56 2438 67 0 0 chr17 20307016 20307313 -69197240 - AluSc SINE Alu -12 297 1 611 294 92 0 chr17 20307585 20307769 -69196784 - MIR SINE MIR -19 243 43 246 250 40 50 chr17 20307946 20308046 -69196507 - MIR SINE MIR -65 143 45 311 299 255 10 chr17 20308066 20308270 -69196283 + L2 LINE L2 3019 3272 0 1089 275 154 16 chr17 20308391 20308513 -69196040 - L2 LINE L2 0 3313 3209 2298 144 52 80 chr17 20308513 20308567 -69195986 + MSTB LTR MaLR 1 55 -371 1958 120 40 3 chr17 20308567 20308866 -69195687 + AluSx SINE Alu 1 310 -2 2298 144 52 80 chr17 20308866 20309249 -69195304 + MSTB LTR MaLR 55 426 0 1089 275 154 16 chr17 20309249 20309562 -69194991 - L2 LINE L2 -104 3209 2818 1934 151 0 16 chr17 20309807 20310112 -69194441 + AluSx SINE Alu 1 300 -12 915 140 0 22 chr17 20310184 20310320 -69194233 + FLAM_C SINE Alu 1 133 0 1538 133 80 39 chr17 20310774 20311060 -69193493 - AluJo SINE Alu -11 301 4 525 174 37 37 chr17 20311708 20311817 -69192736 + MIR SINE MIR 34 142 -66 274 172 0 78 chr17 20311815 20311879 -69192674 - L2 LINE L2 -4 3309 3251 * 642 178 23 31 chr17 20311953 20312082 -69192471 - BC200 scRNA scRNA -60 140 13 1324 223 68 8 chr17 20312092 20312459 -69192094 + LTR16C LTR ERVL 100 488 -3 1797 141 67 48 chr17 20312477 20312853 -69191700 + MLT1B LTR MaLR 1 383 -7 616 302 6 12 chr17 20312857 20313026 -69191527 - MIR SINE MIR -40 222 55 367 287 11 0 chr17 20313954 20314048 -69190505 - MIR SINE MIR -97 165 71 451 309 179 0 chr17 20314452 20314653 -69189900 + MIR SINE MIR 16 252 -10 1673 146 3 44 chr17 20314732 20315073 -69189480 + AluJb SINE Alu 1 329 0 758 198 79 0 chr17 20315191 20315368 -69189185 + Charlie1b DNA MER1_type 72 262 -261 1148 114 0 34 chr17 20315405 20315581 -69188972 - AluJb SINE Alu -3 309 140 593 97 164 12 chr17 20315586 20315751 -69188802 + Charlie1b DNA MER1_type 277 466 -57 1134 137 0 0 chr17 20315753 20315914 -69188639 - AluSg/x SINE Alu -17 293 133 1968 118 3 14 chr17 20315924 20316238 -69188315 - AluSq SINE Alu 0 311 1 435 19 0 0 chr17 20316238 20316290 -69188263 + (TTA)n Simple_repeat Simple_repeat 2 53 0 2062 98 0 37 chr17 20316290 20316586 -69187967 - AluSq SINE Alu -28 285 1 282 125 107 0 chr17 20316588 20316644 -69187909 + Charlie1b DNA MER1_type 462 523 0 766 149 7 84 chr17 20316700 20316812 -69187741 + AluJo SINE Alu 1 99 -213 2330 77 3 13 chr17 20316812 20317122 -69187431 - AluY SINE Alu -4 307 1 766 149 7 84 chr17 20317122 20317163 -69187390 + AluJo SINE Alu 99 142 -170 217 176 20 0 chr17 20317209 20317260 -69187293 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 351 318 16 0 chr17 20317269 20317395 -69187158 - L1ME LINE L1 -340 5781 5654 371 285 32 81 chr17 20318115 20318301 -69186252 - MER5A DNA MER1_type -3 186 10 225 340 45 0 chr17 20319109 20319209 -69185344 + MIR SINE MIR 40 147 -61 610 212 30 86 chr17 20319654 20319685 -69184868 + MIR SINE MIR 74 105 -157 2821 151 44 42 chr17 20319685 20320189 -69184364 + MLT1D LTR MaLR 1 505 0 610 212 30 86 chr17 20320189 20320295 -69184258 + MIR SINE MIR 105 215 -47 1490 111 194 0 chr17 20320295 20320548 -69184005 - AluSp SINE Alu -11 302 1 1997 139 27 3 chr17 20320548 20320848 -69183705 - AluSx SINE Alu -4 308 1 610 212 30 86 chr17 20320848 20320906 -69183647 + MIR SINE MIR 213 260 -2 219 258 48 0 chr17 20321438 20321500 -69183053 - L2 LINE L2 -214 3058 2994 359 319 106 0 chr17 20321824 20321965 -69182588 + MIR SINE MIR 20 175 -87 2433 83 0 0 chr17 20322376 20322688 -69181865 - AluSx SINE Alu 0 312 1 431 239 80 0 chr17 20322897 20323035 -69181518 - MIR SINE MIR -65 197 49 1297 230 144 45 chr17 20324674 20325166 -69179387 + MLT1K LTR MaLR 48 588 0 252 302 0 0 chr17 20325166 20325233 -69179320 - MIR SINE MIR -64 144 86 215 83 0 0 chr17 20326363 20326398 -69178155 - MIR SINE MIR -115 147 114 338 329 16 13 chr17 20327769 20327933 -69176620 - MIR SINE MIR -33 175 27 263 293 22 89 chr17 20328905 20329063 -69175490 - L2 LINE L2 -284 2988 2841 390 250 67 0 chr17 20329737 20329841 -69174712 + MIR SINE MIR 35 145 -63 231 240 60 70 chr17 20330927 20331027 -69173526 + MIR3 SINE MIR 109 207 -1 29 0 0 0 chr17 20331673 20331702 -69172851 + AT_rich Low_complexity Low_complexity 1 29 0 2209 80 0 3 chr17 20331702 20331991 -69172562 - AluSq SINE Alu -25 288 1 1193 97 0 0 chr17 20332129 20332284 -69172269 - AluSc SINE Alu -154 155 1 621 278 167 29 chr17 20332286 20332860 -69171693 - L2 LINE L2 -27 3286 2658 * 684 261 22 0 chr17 20332851 20333031 -69171522 + MIR SINE MIR 9 192 -70 277 320 30 14 chr17 20335113 20335262 -69169291 - MIR SINE MIR -44 218 67 1144 146 12 0 chr17 20335430 20335601 -69168952 - FRAM SINE Alu -5 171 1 191 271 17 0 chr17 20336017 20336076 -69168477 + MIR SINE MIR 79 138 -70 205 321 45 75 chr17 20337729 20337863 -69166690 + MIR SINE MIR 14 143 -119 596 272 71 0 chr17 20338114 20338298 -69166255 - MIR SINE MIR -29 233 37 437 224 10 0 chr17 20338367 20338465 -69166088 - MIR SINE MIR -21 241 143 1838 155 0 17 chr17 20338466 20338763 -69165790 - AluJo SINE Alu -20 292 1 370 267 0 0 chr17 20338764 20338854 -69165699 - U13 snRNA snRNA -14 90 1 727 234 0 0 chr17 20338855 20339000 -69165553 - MIR SINE MIR -115 147 3 259 333 28 35 chr17 20339041 20339182 -69165371 - L3b LINE CR1 -170 1413 1274 1825 157 14 3 chr17 20339688 20339974 -69164579 - AluJb SINE Alu -23 289 1 391 276 92 51 chr17 20340342 20340559 -69163994 + L2 LINE L2 2967 3192 -80 21 0 0 0 chr17 20340584 20340605 -69163948 + AT_rich Low_complexity Low_complexity 1 21 0 215 310 86 0 chr17 20340998 20341115 -69163438 - MIR SINE MIR -62 146 44 219 328 0 0 chr17 20342015 20342076 -69162477 + GA-rich Low_complexity Low_complexity 6 66 0 363 305 202 15 chr17 20342298 20342501 -69162052 - MIR SINE MIR -2 260 20 348 205 13 13 chr17 20342785 20342863 -69161690 - MIR SINE MIR -79 129 52 261 152 0 0 chr17 20343036 20343082 -69161471 - L3 LINE CR1 -106 1471 1426 296 247 0 13 chr17 20343879 20343956 -69160597 - MER91B DNA MER1_type -28 162 87 226 321 71 27 chr17 20343969 20344081 -69160472 - MER91B DNA MER1_type -60 130 14 257 133 0 22 chr17 20344135 20344180 -69160373 - MER91B DNA MER1_type -152 44 1 275 307 0 59 chr17 20344426 20344527 -69160026 - MIR SINE MIR -88 174 80 190 258 91 30 chr17 20345030 20345096 -69159457 - L3 LINE CR1 -102 1475 1406 192 216 0 0 chr17 20346075 20346112 -69158441 - MIR SINE MIR -114 148 112 628 247 18 30 chr17 20346241 20346407 -69158146 - MIR SINE MIR -79 183 20 300 349 34 51 chr17 20346900 20347075 -69157478 + L2 LINE L2 3007 3178 -94 180 274 71 12 chr17 20347096 20347180 -69157373 - MIR SINE MIR -74 134 46 260 192 0 0 chr17 20347390 20347442 -69157111 - L3 LINE CR1 -111 1466 1415 1014 261 70 0 chr17 20347994 20348235 -69156318 + MIR SINE MIR 1 258 -4 196 282 109 55 chr17 20348449 20348559 -69155994 + L2 LINE L2 3197 3312 -1 554 268 78 52 chr17 20349187 20349418 -69155135 - L2 LINE L2 -117 3155 2919 2307 82 3 10 chr17 20349765 20350069 -69154484 + AluSp SINE Alu 1 302 -11 1293 95 0 0 chr17 20350069 20350238 -69154315 + AluSq SINE Alu 135 303 -10 1699 138 49 23 chr17 20350240 20350544 -69154009 + AluJo SINE Alu 1 312 0 875 139 0 53 chr17 20350654 20350805 -69153748 - FLAM_C SINE Alu 0 143 1 231 294 76 8 chr17 20350835 20350954 -69153599 + L1P LINE L1 4918 5044 -1102 21 36 0 0 chr17 20351019 20351047 -69153506 + AT_rich Low_complexity Low_complexity 1 28 0 2249 80 0 3 chr17 20351117 20351440 -69153113 + AluSc SINE Alu 1 322 0 1935 99 0 51 chr17 20351448 20351740 -69152813 + AluSx SINE Alu 1 277 -35 369 313 16 49 chr17 20351758 20351953 -69152600 + L1M4 LINE L1 5171 5367 -779 791 220 13 0 chr17 20352421 20352580 -69151973 - MIR SINE MIR 0 262 102 1174 288 40 19 chr17 20353303 20353730 -69150823 - L2 LINE L2 -25 3288 2853 453 19 0 0 chr17 20354530 20354584 -69149969 + (CA)n Simple_repeat Simple_repeat 2 55 0 456 265 262 16 chr17 20354823 20355208 -69149345 + L2 LINE L2 2833 3312 -1 2048 123 7 3 chr17 20355223 20355531 -69149022 + AluSc SINE Alu 1 309 0 531 226 153 15 chr17 20355598 20355735 -69148818 - MIR SINE MIR -18 244 89 242 280 11 75 chr17 20355905 20355998 -69148555 - MIR3 SINE MIR -47 161 75 275 290 253 20 chr17 20356132 20356429 -69148124 + MLT1K LTR MaLR 142 507 -81 363 328 46 0 chr17 20356617 20356748 -69147805 + MIR SINE MIR 108 244 -18 565 303 160 33 chr17 20357076 20357530 -69147023 + L2 LINE L2 2248 2643 -670 186 103 0 0 chr17 20357530 20357559 -69146994 + (TA)n Simple_repeat Simple_repeat 2 30 0 565 303 160 33 chr17 20357559 20357706 -69146847 + L2 LINE L2 2643 3313 0 2258 65 3 46 chr17 20359655 20359978 -69144575 - AluY SINE Alu -2 309 1 488 244 16 24 chr17 20360318 20360445 -69144108 + MIR SINE MIR 46 171 -91 463 297 152 12 chr17 20360510 20360675 -69143878 - MIR SINE MIR -44 218 31 194 295 114 48 chr17 20362799 20362904 -69141649 - MIR SINE MIR -70 192 81 22 0 0 0 chr17 20364137 20364159 -69140394 + GC_rich Low_complexity Low_complexity 1 22 0 330 244 28 44 chr17 20364483 20364663 -69139890 + G-rich Low_complexity Low_complexity 2 178 0 224 315 0 0 chr17 20366516 20366589 -69137964 + CT-rich Low_complexity Low_complexity 1 73 0 241 381 24 8 chr17 20366963 20367089 -69137464 - MIR SINE MIR -88 174 47 426 259 50 22 chr17 20367338 20367477 -69137076 + MIR3 SINE MIR 15 157 -51 266 341 77 0 chr17 20367942 20368033 -69136520 + MIR SINE MIR 51 148 -114 237 313 12 0 chr17 20368093 20368173 -69136380 + CT-rich Low_complexity Low_complexity 2 82 0 2157 121 3 0 chr17 20368444 20368750 -69135803 - AluSx SINE Alu -5 307 1 458 256 135 25 chr17 20368850 20369026 -69135527 - MIR SINE MIR -65 143 3 488 249 165 17 chr17 20369287 20369524 -69135029 - L2 LINE L2 0 3313 3042 1344 279 168 44 chr17 20369579 20369759 -69134794 - L2 LINE L2 -412 2902 2746 2106 123 3 0 chr17 20369759 20370052 -69134501 - AluSx SINE Alu -18 294 1 1344 279 168 44 chr17 20370052 20370828 -69133725 - L2 LINE L2 -568 2746 1827 2228 113 0 3 chr17 20370837 20371147 -69133406 + AluSq SINE Alu 1 309 -4 313 167 61 53 chr17 20371150 20371264 -69133289 + L1MB8 LINE L1 6064 6178 0 411 286 40 0 chr17 20371377 20371503 -69133050 + L1MC4a LINE L1 5768 5898 -1910 432 0 0 0 chr17 20371545 20371593 -69132960 + (TG)n Simple_repeat Simple_repeat 2 49 0 1784 150 66 0 chr17 20371623 20371909 -69132644 - AluSx SINE Alu -2 310 6 1352 176 83 7 chr17 20371959 20372237 -69132316 + AluJo SINE Alu 1 299 -13 2021 155 0 3 chr17 20372243 20372553 -69132000 + AluSx SINE Alu 2 310 -2 1703 163 0 41 chr17 20372681 20372975 -69131578 + AluSx SINE Alu 1 282 -30 222 328 144 8 chr17 20373481 20373606 -69130947 + MIR SINE MIR 86 227 -35 819 296 96 42 chr17 20373867 20374018 -69130535 - L2 LINE L2 0 3272 3131 1639 197 17 3 chr17 20374018 20374313 -69130240 - AluJo SINE Alu -9 303 5 819 296 96 42 chr17 20374313 20374654 -69129899 - L2 LINE L2 -141 3131 2776 244 260 27 0 chr17 20374665 20374738 -69129815 - MIR SINE MIR -12 250 176 544 239 142 13 chr17 20374861 20375016 -69129537 - MIR SINE MIR -75 187 13 189 128 21 43 chr17 20376868 20376915 -69127638 + L2 LINE L2 3016 3061 -211 204 171 0 0 chr17 20376994 20377029 -69127524 + L2 LINE L2 3254 3288 -25 1774 147 33 13 chr17 20378393 20378699 -69125854 + AluJo SINE Alu 1 312 0 192 267 100 40 chr17 20380189 20380339 -69124214 + L2 LINE L2 2922 3080 -192 2264 85 20 0 chr17 20382729 20383024 -69121529 - AluSg SINE Alu -9 301 1 183 42 0 0 chr17 20383646 20383670 -69120883 + (AGGTG)n Simple_repeat Simple_repeat 4 27 0 235 305 211 0 chr17 20384175 20384270 -69120283 - L3 LINE CR1 -32 1545 1431 573 265 19 49 chr17 20385970 20386172 -69118381 - MIR SINE MIR -25 237 41 333 306 77 15 chr17 20387631 20387790 -69116763 + MIR SINE MIR 31 196 -63 312 314 58 22 chr17 20388564 20388701 -69115852 + L2 LINE L2 2572 2713 -601 4197 181 113 2 chr17 20388701 20389663 -69114890 + L1MC3 LINE L1 6711 7779 -6 2262 90 0 19 chr17 20389664 20389976 -69114577 + AluSq SINE Alu 1 306 -7 1665 104 13 0 chr17 20390051 20390281 -69114272 + AluSq SINE Alu 2 234 -79 2501 70 3 0 chr17 20390359 20390671 -69113882 - AluSp SINE Alu 0 313 1 826 262 182 31 chr17 20390675 20391178 -69113375 + L2 LINE L2 2737 3313 0 186 361 25 58 chr17 20391683 20391746 -69112807 + L2 LINE L2 2724 2788 -526 2264 91 7 0 chr17 20391746 20392043 -69112510 + AluSp SINE Alu 1 299 -14 186 361 25 58 chr17 20392043 20392082 -69112471 + L2 LINE L2 2788 2827 -487 2635 242 67 27 chr17 20392082 20392833 -69111720 + MER20B DNA MER1_type 1 781 -3 186 361 25 58 chr17 20392833 20392897 -69111656 + L2 LINE L2 2827 2883 -431 1312 184 88 32 chr17 20392897 20393180 -69111373 - AluJo SINE Alu -13 299 1 186 361 25 58 chr17 20393180 20393252 -69111301 + L2 LINE L2 2883 2956 -358 2314 109 0 0 chr17 20593290 20593593 -68910960 + AluSx SINE Alu 1 303 -9 866 170 0 0 chr17 20594162 20594297 -68910256 - AluJo SINE Alu -177 135 1 231 36 0 0 chr17 20594770 20594798 -68909755 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1218 123 28 6 chr17 20594800 20594979 -68909574 - AluJo SINE Alu -30 282 100 2949 134 126 21 chr17 20595161 20595522 -68909031 + MER1A DNA MER1_type 1 425 -2275 2427 74 6 10 chr17 20595522 20595834 -68908719 + AluY SINE Alu 1 311 0 2949 134 126 21 chr17 20595834 20595948 -68908605 + MER1A DNA MER1_type 425 526 -1 1747 144 0 91 chr17 20595994 20596314 -68908239 - AluJb SINE Alu -21 291 1 1801 176 10 3 chr17 20596870 20597172 -68907381 + AluJo SINE Alu 1 304 -8 2482 67 0 13 chr17 20597187 20597502 -68907051 - AluY SINE Alu 0 311 1 30 45 0 0 chr17 20597795 20597839 -68906714 + AT_rich Low_complexity Low_complexity 1 44 0 37 0 0 0 chr17 20598404 20598441 -68906112 + AT_rich Low_complexity Low_complexity 1 37 0 2465 97 21 97 chr17 20599140 20599294 -68905259 + L1MB1 LINE L1 5451 5615 -553 2465 150 11 56 chr17 20599294 20599760 -68904793 + L1MB1 LINE L1 5721 6167 -1 2465 97 21 97 chr17 20599760 20599776 -68904777 + L1MB1 LINE L1 5615 6167 -1 1286 150 68 18 chr17 20599776 20599996 -68904557 + AluJb SINE Alu 68 298 -14 324 343 217 10 chr17 20600426 20600733 -68903820 - L2 LINE L2 -562 2752 2346 2388 197 100 28 chr17 20600733 20601262 -68903291 - MLT1F1 LTR MaLR 0 567 1 324 343 217 10 chr17 20601262 20601345 -68903208 - L2 LINE L2 -968 2346 2281 613 292 43 36 chr17 20602574 20602821 -68901732 - MIR SINE MIR -13 249 3 465 249 202 0 chr17 20602883 20603056 -68901497 + L2 LINE L2 3106 3313 0 2048 124 7 0 chr17 20603187 20603614 -68900939 + AluSq SINE Alu 1 429 0 356 281 119 73 chr17 20604180 20604424 -68900129 + L1MC/D LINE L1 4730 4961 -1185 633 121 0 10 chr17 20604424 20604523 -68900030 - L1PA5 LINE L1 0 6154 6057 356 281 119 73 chr17 20604523 20604545 -68900008 + L1MC/D LINE L1 4961 4981 -1165 2212 97 23 7 chr17 20604545 20604853 -68899700 + AluSp SINE Alu 1 313 0 356 281 119 73 chr17 20604853 20604970 -68899583 + L1MC/D LINE L1 4981 5132 -1014 925 244 47 73 chr17 20605084 20605236 -68899317 + L1MC/D LINE L1 5255 5410 -2398 565 170 198 0 chr17 20605236 20605342 -68899211 - FLAM_A SINE Alu -6 127 1 925 244 47 73 chr17 20605342 20605598 -68898955 + L1MC/D LINE L1 5410 5652 -2156 1883 133 53 0 chr17 20605752 20606037 -68898516 - AluJo SINE Alu -12 300 1 2524 64 0 0 chr17 20606229 20606525 -68898028 + AluY SINE Alu 1 296 -15 438 305 112 34 chr17 20606763 20606807 -68897746 + HAL1b LINE L1 68 107 -1241 2068 72 0 0 chr17 20606807 20607056 -68897497 + AluY SINE Alu 43 291 -20 438 305 112 34 chr17 20607056 20607483 -68897070 + HAL1b LINE L1 107 576 -772 893 294 180 20 chr17 20607612 20608247 -68896306 + L2 LINE L2 2574 3312 -1 30 45 0 0 chr17 20608363 20608407 -68896146 + AT_rich Low_complexity Low_complexity 1 44 0 714 187 8 8 chr17 20608417 20608540 -68896013 + FLAM_A SINE Alu 1 123 -10 461 261 118 17 chr17 20609170 20609437 -68895116 + L1MB8 LINE L1 5576 5881 -303 225 360 80 8 chr17 20610623 20610748 -68893805 - L2 LINE L2 -14 3258 3125 1390 278 88 8 chr17 20610897 20611394 -68893159 + L1MC4 LINE L1 6784 7320 -722 330 353 72 7 chr17 20611430 20611583 -68892970 + L1MC4 LINE L1 7402 7564 -478 9186 180 98 73 chr17 20611640 20612737 -68891816 + L1MDa LINE L1 1 1070 -5651 2338 76 13 7 chr17 20612737 20613041 -68891512 + AluY SINE Alu 1 306 -5 9186 180 98 73 chr17 20613041 20613119 -68891434 + L1MDa LINE L1 1070 1145 -5576 2256 77 3 27 chr17 20613119 20613416 -68891137 + AluSp SINE Alu 1 290 -23 9186 180 98 73 chr17 20613416 20614805 -68889748 + L1MDa LINE L1 1145 2684 -4037 1872 140 17 20 chr17 20614805 20615105 -68889448 + AluSx SINE Alu 1 299 -13 9186 180 98 73 chr17 20615105 20615257 -68889296 + L1MDa LINE L1 2684 2831 -3890 912 220 41 8 chr17 20615267 20615512 -68889041 + L1MDa LINE L1 2897 3149 -3391 864 195 29 75 chr17 20615492 20615733 -68888820 + L1MB8 LINE L1 5949 6178 0 * 1725 230 99 48 chr17 20615733 20615962 -68888591 + L1MDa LINE L1 3143 3359 -3181 2069 104 20 7 chr17 20615962 20616261 -68888292 + AluSg SINE Alu 1 303 -7 1725 230 99 48 chr17 20616261 20616741 -68887812 + L1MDa LINE L1 3359 3888 -2652 639 232 0 7 chr17 20616930 20617068 -68887485 + L1MDa LINE L1 3898 4034 -2506 365 239 23 0 chr17 20617068 20617156 -68887397 + MER66B LTR ERV1 256 345 -141 1153 111 7 0 chr17 20617211 20617364 -68887189 + AluSq SINE Alu 1 154 -159 2284 198 37 36 chr17 20617384 20617946 -68886607 + L1MDa LINE L1 4078 4640 -1900 1429 143 136 0 chr17 20617948 20618221 -68886332 + L1MA8 LINE L1 5978 6287 -4 1902 150 17 0 chr17 20618232 20618526 -68886027 + AluSx SINE Alu 1 299 -13 1912 101 76 4 chr17 20618551 20618828 -68885725 + AluSg SINE Alu 1 297 -13 266 192 13 90 chr17 20618840 20618918 -68885635 + L1MDa LINE L1 4650 4721 -1819 751 172 0 25 chr17 20618929 20619051 -68885502 + FAM SINE Alu 54 172 -13 2456 239 49 12 chr17 20619051 20619757 -68884796 + L1MDa LINE L1 4719 5456 -1084 2321 109 3 0 chr17 20619757 20620069 -68884484 + AluSp SINE Alu 1 313 0 2456 239 49 12 chr17 20620069 20620118 -68884435 + L1MDa LINE L1 5456 5502 -1038 299 119 0 0 chr17 20620131 20620173 -68884380 + Alu SINE Alu 1 42 -260 395 182 26 0 chr17 20620177 20620254 -68884299 + L1MC4 LINE L1 7964 8042 0 2321 95 0 7 chr17 20620265 20620569 -68883984 + AluSg SINE Alu 1 302 -8 1229 231 148 37 chr17 20620571 20620830 -68883723 + L1MB3 LINE L1 371 693 -5591 2571 137 43 28 chr17 20620830 20621252 -68883301 + MSTB1 LTR MaLR 5 432 0 1229 231 148 37 chr17 20621252 20621398 -68883155 + L1MB3 LINE L1 693 821 -5463 2272 98 7 0 chr17 20621398 20621693 -68882860 + AluSq SINE Alu 1 297 -16 216 97 0 0 chr17 20621707 20621738 -68882815 + (TG)n Simple_repeat Simple_repeat 2 32 0 213 196 0 0 chr17 20621737 20621783 -68882770 + (CATA)n Simple_repeat Simple_repeat 3 48 0 * 3047 204 27 39 chr17 20621783 20623135 -68881418 + L1MB3 LINE L1 804 2172 -4247 1661 80 0 9 chr17 20623135 20623347 -68881206 + AluSq SINE Alu 96 305 -8 3047 204 27 39 chr17 20623347 20623362 -68881191 + L1MB3 LINE L1 2172 6383 -36 2137 137 3 0 chr17 20623368 20623674 -68880879 + AluSx SINE Alu 1 307 -5 235 65 109 0 chr17 20623779 20623825 -68880728 + L1MB4 LINE L1 6129 6179 -1 387 278 104 26 chr17 20623840 20624120 -68880433 + L1M4b LINE L1 1645 2092 -4471 22 0 0 0 chr17 20624222 20624244 -68880309 + AT_rich Low_complexity Low_complexity 1 22 0 360 335 78 16 chr17 20624244 20624489 -68880064 + L1M4b LINE L1 2033 2292 -4271 883 264 18 9 chr17 20624491 20624718 -68879835 - MLT1C LTR MaLR 0 467 239 1437 266 52 4 chr17 20624719 20625201 -68879352 + L1M4b LINE L1 3344 3848 -2534 * 2391 223 27 30 chr17 20625187 20625600 -68878953 + L1M4b LINE L1 4423 4835 -1547 2345 103 3 0 chr17 20625600 20625901 -68878652 + AluSp SINE Alu 1 302 -11 2391 223 27 30 chr17 20625901 20626151 -68878402 + L1M4b LINE L1 4835 5084 -1298 914 168 0 0 chr17 20626166 20626309 -68878244 - FLAM_C SINE Alu 0 143 1 286 244 12 24 chr17 20626333 20626415 -68878138 + L1M4b LINE L1 5127 5207 -1175 242 214 0 0 chr17 20626415 20626457 -68878096 - AluJ/monomer SINE Alu -260 42 1 1245 225 9 9 chr17 20626481 20626796 -68877757 + L1MB7 LINE L1 5127 5441 -941 * 3624 148 71 1 chr17 20626788 20627449 -68877104 + L1MA5 LINE L1 4664 5370 -776 571 139 29 44 chr17 20627446 20627583 -68876970 - L1M4 LINE L1 -1352 4794 4660 * 1754 145 15 5 chr17 20627589 20628469 -68876084 + L1MA5 LINE L1 5366 6295 -5 3951 170 20 14 chr17 20628478 20629287 -68875266 + L1MB7 LINE L1 5424 6234 -186 1106 167 4 108 chr17 20629293 20629533 -68875020 - MLT1B LTR MaLR -3 387 173 657 278 96 32 chr17 20629700 20630143 -68874410 - LTR33A LTR ERVL -9 514 25 316 308 58 41 chr17 20630581 20630753 -68873800 - L1M4 LINE L1 -2309 3837 3663 372 277 97 75 chr17 20631042 20631320 -68873233 + L2 LINE L2 2973 3256 -16 621 226 15 8 chr17 20631445 20631578 -68872975 + MER58B DNA MER1_type 207 340 -1 377 172 0 0 chr17 20632036 20632100 -68872453 - Charlie8 DNA MER1_type -2272 145 82 252 235 25 42 chr17 20632290 20632409 -68872144 + L1P4 LINE L1 5315 5431 -735 2296 87 0 0 chr17 20632422 20632740 -68871813 + AluY SINE Alu 2 319 0 1044 84 0 0 chr17 20632826 20632957 -68871596 + AluSc SINE Alu 1 131 -178 267 0 70 0 chr17 20632958 20633001 -68871552 + (TA)n Simple_repeat Simple_repeat 2 47 0 504 316 76 8 chr17 20633011 20633261 -68871292 + L1MC4a LINE L1 5521 5787 -375 2581 137 45 33 chr17 20633385 20633810 -68870743 + Tigger2a DNA MER2_type 5 434 0 2188 119 7 0 chr17 20634030 20634332 -68870221 + AluSg SINE Alu 1 304 -6 289 81 0 0 chr17 20635352 20635389 -68869164 + MER68 LTR ERV1 3 39 -523 519 17 0 0 chr17 20635394 20635454 -68869099 + (TAAA)n Simple_repeat Simple_repeat 2 61 0 661 223 9 0 chr17 20635454 20635566 -68868987 - FLAM_C SINE Alu -29 114 2 2897 156 51 18 chr17 20635569 20636083 -68868470 + MER68 LTR ERV1 32 562 0 801 223 0 0 chr17 20636108 20636265 -68868288 + FRAM SINE Alu 2 158 -18 284 297 41 32 chr17 20636876 20637095 -68867458 + L1MC4a LINE L1 5841 6061 -1747 4021 127 83 40 chr17 20637103 20638370 -68866183 - LTR12 LTR ERV1 0 1521 6 2255 85 3 26 chr17 20638426 20638732 -68865821 - AluY SINE Alu -12 299 1 2395 77 0 0 chr17 20638778 20639077 -68865476 + AluY SINE Alu 1 299 -12 530 191 48 40 chr17 20639257 20639383 -68865170 + FRAM SINE Alu 50 176 0 652 260 113 71 chr17 20639438 20639609 -68864944 + HAL1 LINE L1 1217 1379 -1128 2131 118 10 3 chr17 20639609 20639897 -68864656 + AluSx SINE Alu 3 292 -20 652 260 113 71 chr17 20639897 20640160 -68864393 + HAL1 LINE L1 1379 1669 -838 1406 231 78 5 chr17 20640460 20640858 -68863695 + L1ME3A LINE L1 5401 5827 -343 1923 166 0 3 chr17 20640859 20641167 -68863386 + AluSx SINE Alu 1 307 -5 252 257 88 59 chr17 20641167 20641251 -68863302 + L1MDa LINE L1 2500 2580 -3960 3756 156 46 46 chr17 20641251 20641965 -68862588 + L1MB2 LINE L1 5450 6163 -8 252 257 88 59 chr17 20641965 20642427 -68862126 + L1MDa LINE L1 2580 3064 -3476 24 32 0 0 chr17 20642553 20642584 -68861969 + AT_rich Low_complexity Low_complexity 1 31 0 347 283 116 17 chr17 20642621 20642794 -68861759 + L1MEc LINE L1 1624 1813 -4583 420 289 118 53 chr17 20642940 20643839 -68860714 + L1MEc LINE L1 3114 4070 -2145 23 33 0 0 chr17 20645197 20645227 -68859326 + GC_rich Low_complexity Low_complexity 1 30 0 714 181 32 64 chr17 20645559 20645747 -68858806 + MER5A DNA MER1_type 5 186 -3 687 180 41 67 chr17 20646164 20646358 -68858195 + MER20 DNA MER1_type 2 190 -29 276 297 27 27 chr17 20646621 20646769 -68857784 - L1MEc LINE L1 -2365 3850 3703 573 132 19 28 chr17 20646771 20646877 -68857676 + FLAM_C SINE Alu 38 142 -1 437 296 90 86 chr17 20646877 20647356 -68857197 - L1MEc LINE L1 -2518 3697 3237 232 189 14 81 chr17 20647510 20647584 -68856969 - L1MEc LINE L1 -3879 2517 2449 821 263 82 68 chr17 20648135 20648339 -68856214 - HAL1b LINE L1 -536 812 612 1682 166 0 7 chr17 20648339 20648623 -68855930 + AluJo SINE Alu 1 282 -30 821 263 82 68 chr17 20648623 20648842 -68855711 - HAL1b LINE L1 -736 612 377 2302 88 0 0 chr17 20648842 20649148 -68855405 + AluY SINE Alu 1 306 -5 821 263 82 68 chr17 20649148 20649283 -68855270 - HAL1b LINE L1 -971 377 245 1905 96 100 0 chr17 20649284 20649555 -68854998 - AluSx SINE Alu -14 298 1 2228 102 7 0 chr17 20649769 20650074 -68854479 - AluSx SINE Alu -4 308 2 252 0 0 0 chr17 20650215 20650243 -68854310 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1006 84 0 28 chr17 20650247 20650390 -68854163 - AluSg/x SINE Alu -27 285 147 1797 162 3 0 chr17 20650390 20650686 -68853867 - AluJo SINE Alu -15 297 1 372 287 23 8 chr17 20650715 20650844 -68853709 + MER94 DNA DNA 4 134 0 2093 114 0 7 chr17 20651238 20651546 -68853007 - AluSg SINE Alu -4 306 1 300 310 0 11 chr17 20651660 20651747 -68852806 + L1M4 LINE L1 2742 2827 -3319 2066 99 7 3 chr17 20651815 20652099 -68852454 + AluSg SINE Alu 9 293 -17 2020 122 0 0 chr17 20652129 20652416 -68852137 - AluSx SINE Alu -21 291 5 798 126 0 70 chr17 20652441 20652584 -68851969 + FLAM_C SINE Alu 1 133 0 2180 99 0 13 chr17 20652705 20652839 -68851714 + AluY SINE Alu 1 135 -176 2155 81 3 36 chr17 20652839 20653147 -68851406 + AluSq SINE Alu 1 298 -15 2180 99 0 13 chr17 20653147 20653326 -68851227 + AluY SINE Alu 135 310 -1 2158 109 0 0 chr17 20653425 20653727 -68850826 - AluSx SINE Alu -10 302 1 4528 253 116 35 chr17 20653789 20654589 -68849964 + L2 LINE L2 1152 1885 -1428 1817 142 17 0 chr17 20654589 20654878 -68849675 + AluJb SINE Alu 1 294 -18 4528 253 116 35 chr17 20654878 20655005 -68849548 + L2 LINE L2 1885 2000 -1313 2052 113 7 0 chr17 20655005 20655298 -68849255 - AluSg SINE Alu -15 295 1 4528 253 116 35 chr17 20655298 20655402 -68849151 + L2 LINE L2 2000 2094 -1219 2291 77 0 3 chr17 20655402 20655701 -68848852 - AluY SINE Alu -13 298 1 4528 253 116 35 chr17 20655701 20656443 -68848110 + L2 LINE L2 2094 3104 -209 2174 108 0 7 chr17 20656443 20656750 -68847803 + AluSx SINE Alu 1 305 -7 4528 253 116 35 chr17 20656750 20656881 -68847672 + L2 LINE L2 3104 3223 -90 619 108 0 0 chr17 20656885 20656968 -68847585 - 5S rRNA rRNA -32 89 7 370 148 8 205 chr17 20656968 20657090 -68847463 + L2 LINE L2 3214 3311 -2 273 285 89 76 chr17 20657100 20657250 -68847303 + L1M4 LINE L1 3802 3948 -2198 2141 107 0 0 chr17 20657250 20657541 -68847012 + AluSx SINE Alu 1 291 -21 273 285 89 76 chr17 20657541 20657681 -68846872 + L1M4 LINE L1 3948 4096 -2050 35 54 0 0 chr17 20658194 20658250 -68846303 + AT_rich Low_complexity Low_complexity 1 56 0 2449 150 70 0 chr17 20658279 20658679 -68845874 + MSTC LTR MaLR 1 428 0 331 136 0 159 chr17 20658710 20658745 -68845808 + LTR67 LTR ERVL 484 498 -59 2304 65 0 14 chr17 20658745 20659039 -68845514 + AluY SINE Alu 1 290 -21 331 136 0 159 chr17 20659039 20659091 -68845462 + LTR67 LTR ERVL 498 557 0 2332 78 0 3 chr17 20659234 20659540 -68845013 + AluSq SINE Alu 1 305 -8 2336 85 0 0 chr17 20659549 20659856 -68844697 + AluSg SINE Alu 1 307 -3 2477 81 4 1 chr17 20660121 20661179 -68843374 + AluY SINE Alu 1 305 -6 1723 127 14 0 chr17 20661222 20661524 -68843029 - AluJo SINE Alu 0 311 6 572 167 127 7 chr17 20661535 20661685 -68842868 - FAM SINE Alu -12 173 6 642 133 0 0 chr17 20661762 20661867 -68842686 + AluSg/x SINE Alu 206 310 0 814 184 11 35 chr17 20661867 20662041 -68842512 + L1MB2 LINE L1 5658 5827 -344 2048 133 0 0 chr17 20662041 20662342 -68842211 + AluSx SINE Alu 1 301 -11 995 207 91 11 chr17 20662342 20662617 -68841936 + LTR65 LTR ERV1 366 662 -7 955 254 9 18 chr17 20663423 20663640 -68840913 - MER58A DNA MER1_type -9 215 1 437 272 133 15 chr17 20663652 20663774 -68840779 + MIR SINE MIR 39 145 -117 1899 116 3 3 chr17 20663774 20664058 -68840495 + AluSx SINE Alu 16 299 -13 437 272 133 15 chr17 20664058 20664130 -68840423 + MIR SINE MIR 145 256 -6 238 269 75 21 chr17 20664185 20664278 -68840275 - L2 LINE L2 -218 3054 2957 2044 92 21 7 chr17 20664294 20664575 -68839978 - AluSx SINE Alu -27 285 1 598 251 37 60 chr17 20664585 20664800 -68839753 + MIR SINE MIR 53 262 0 372 258 11 0 chr17 20665192 20665262 -68839291 + MIR3 SINE MIR 117 190 -18 2082 121 14 0 chr17 20665262 20665559 -68838994 - AluSx SINE Alu -11 301 1 372 258 11 0 chr17 20665559 20665577 -68838976 + MIR3 SINE MIR 190 206 -2 586 111 0 0 chr17 20665827 20665908 -68838645 + AluSg SINE Alu 2 82 -228 3524 143 76 7 chr17 20666810 20667404 -68837149 - MER41B LTR ERV1 0 635 1 635 190 141 0 chr17 20667547 20667710 -68836843 + LTR10D LTR ERV1 1 186 -327 2419 62 0 3 chr17 20667718 20668023 -68836530 + AluY SINE Alu 1 304 -7 1254 99 0 0 chr17 20668023 20668194 -68836359 + AluSc SINE Alu 133 303 -6 436 186 9 69 chr17 20668273 20668385 -68836168 - MER33 DNA MER1_type -259 65 1 2007 84 20 37 chr17 20668402 20668700 -68835853 + AluSx SINE Alu 6 298 -14 2210 92 0 0 chr17 20668705 20669000 -68835553 + AluSx SINE Alu 5 299 -13 645 290 47 0 chr17 20669012 20669181 -68835372 + HERV16 LTR ERVL 2693 2869 -2127 1911 210 94 74 chr17 20669213 20669628 -68834925 + MER77 LTR ERV1 41 447 -158 1923 111 11 4 chr17 20669628 20669908 -68834645 - AluY SINE Alu -29 282 1 1911 210 94 74 chr17 20669908 20670067 -68834486 + MER77 LTR ERV1 447 601 -4 27 0 0 0 chr17 20670279 20670306 -68834247 + AT_rich Low_complexity Low_complexity 1 27 0 1697 63 0 5 chr17 20670309 20670531 -68834022 - L1MA1 LINE L1 -5 6297 6077 1979 127 0 10 chr17 20670534 20670833 -68833720 - AluSx SINE Alu -16 296 1 287 196 98 18 chr17 20670844 20670871 -68833682 - L1MEc LINE L1 -4689 1707 1684 2087 113 0 10 chr17 20670871 20671173 -68833380 - AluSq SINE Alu -14 299 1 287 196 98 18 chr17 20671173 20671257 -68833296 - L1MEc LINE L1 -4712 1684 1587 1440 188 0 4 chr17 20671257 20671536 -68833017 - AluJb SINE Alu 0 307 30 349 291 26 56 chr17 20671550 20671641 -68832912 - L1MEc LINE L1 -4807 1589 1497 2405 53 0 3 chr17 20671641 20671943 -68832610 - AluY SINE Alu -10 301 1 1779 114 96 0 chr17 20671945 20672216 -68832337 - AluSx SINE Alu -15 297 1 349 291 26 56 chr17 20672216 20672461 -68832092 - L1MEc LINE L1 -4900 1496 1260 1835 126 39 18 chr17 20672493 20672779 -68831774 + AluSx SINE Alu 1 292 -20 2316 80 3 0 chr17 20672953 20673255 -68831298 + AluSq SINE Alu 1 303 -10 526 271 42 92 chr17 20673679 20673941 -68830612 + MIR SINE MIR 13 261 -1 272 295 241 6 chr17 20674677 20674843 -68829710 + MIR SINE MIR 53 257 -5 1933 100 38 0 chr17 20674894 20675183 -68829370 - AluSx SINE Alu -12 300 1 3447 89 126 18 chr17 20675310 20675881 -68828672 + LTR10E LTR ERV1 1 633 0 186 263 105 0 chr17 20675883 20675940 -68828613 + MIR SINE MIR 82 144 -64 2262 55 10 0 chr17 20677845 20678134 -68826419 + AluSp SINE Alu 1 292 -21 2015 98 20 20 chr17 20678152 20678457 -68826096 - AluSq SINE Alu -8 305 1 225 287 233 13 chr17 20678471 20678621 -68825932 + MIR3 SINE MIR 20 202 -6 696 270 155 60 chr17 20678861 20679344 -68825209 - L2 LINE L2 -5 3308 2872 1481 202 27 0 chr17 20679344 20679636 -68824917 + AluJo SINE Alu 2 301 -11 696 270 155 60 chr17 20679636 20679697 -68824856 - L2 LINE L2 -441 2872 2818 1235 163 139 4 chr17 20679697 20679955 -68824598 + AluJo SINE Alu 5 297 -15 696 270 155 60 chr17 20679955 20680020 -68824533 - L2 LINE L2 -495 2818 2627 963 257 59 64 chr17 20680031 20680153 -68824400 + L2 LINE L2 2202 2323 -991 1295 72 169 0 chr17 20680153 20680348 -68824205 + MER30 DNA MER1_type 2 229 -1 963 257 59 64 chr17 20680348 20680449 -68824104 + L2 LINE L2 2323 2423 -891 2005 100 45 0 chr17 20680449 20680740 -68823813 - AluSq SINE Alu -9 304 1 963 257 59 64 chr17 20680740 20680919 -68823634 + L2 LINE L2 2423 2603 -711 196 359 39 10 chr17 20680920 20681023 -68823530 - L2 LINE L2 -245 3068 2963 971 157 65 109 chr17 20681230 20681412 -68823141 - MER58A DNA MER1_type -2200 220 49 1645 142 38 0 chr17 20681412 20681673 -68822880 + AluSx SINE Alu 31 301 -11 971 157 65 109 chr17 20681673 20681720 -68822833 - MER58A DNA MER1_type -2371 49 1 2317 57 0 0 chr17 20681908 20682215 -68822338 + AluY SINE Alu 2 308 0 565 271 164 14 chr17 20682306 20682540 -68822013 + L1ME LINE L1 5312 5510 -660 1887 111 56 0 chr17 20682540 20682828 -68821725 - AluSx SINE Alu -8 304 1 565 271 164 14 chr17 20682828 20683013 -68821540 + L1ME LINE L1 5510 5794 -376 2158 111 0 0 chr17 20683137 20683435 -68821118 - AluSx SINE Alu -14 298 1 1245 156 204 0 chr17 20683511 20683761 -68820792 + AluJo SINE Alu 1 301 -1 2088 135 0 0 chr17 20683810 20684121 -68820432 - AluSx SINE Alu -1 311 1 853 277 127 17 chr17 20684319 20684730 -68819823 - L2 LINE L2 -749 2565 2110 307 272 161 12 chr17 20684807 20684969 -68819584 + L2 LINE L2 3118 3303 -10 2100 99 3 7 chr17 20685297 20685600 -68818953 - AluSx SINE Alu -10 302 1 769 287 36 9 chr17 20685749 20685972 -68818581 - MIR SINE MIR 0 262 34 221 238 0 0 chr17 20686012 20686054 -68818499 + L2 LINE L2 3017 3058 -255 2348 72 0 3 chr17 20686439 20686743 -68817810 - AluY SINE Alu -8 303 1 2179 107 3 0 chr17 20686753 20687061 -68817492 - AluSq SINE Alu -4 309 1 23 33 0 0 chr17 20687331 20687361 -68817192 + AT_rich Low_complexity Low_complexity 1 30 0 449 258 86 25 chr17 20687860 20688023 -68816530 + MIR3 SINE MIR 35 207 -1 361 364 25 0 chr17 20688179 20688297 -68816256 - L2 LINE L2 -18 3254 3134 329 372 18 6 chr17 20688315 20688479 -68816074 - L2 LINE L2 -720 2594 2429 432 277 52 105 chr17 20688628 20688868 -68815685 + MIR SINE MIR 37 262 0 2061 109 0 16 chr17 20689740 20690052 -68814501 - AluSg SINE Alu -3 307 1 2166 120 0 3 chr17 20690740 20691049 -68813504 - AluSq SINE Alu -5 308 1 1165 125 0 0 chr17 20691282 20691450 -68813103 + AluSg/x SINE Alu 135 302 -8 335 288 124 20 chr17 20692018 20692329 -68812224 + L1ME4a LINE L1 5335 5673 -586 390 129 0 0 chr17 20692330 20692392 -68812161 + (TG)n Simple_repeat Simple_repeat 2 63 0 346 303 70 35 chr17 20692392 20692521 -68812032 + L1ME4a LINE L1 5681 5823 -298 1740 184 0 0 chr17 20692521 20692826 -68811727 - AluJo SINE Alu -5 307 3 346 303 70 35 chr17 20692826 20692924 -68811629 + L1ME4a LINE L1 5823 5916 -205 3320 168 91 15 chr17 20693217 20693281 -68811272 + L1MD2 LINE L1 5519 5577 -782 1911 128 9 40 chr17 20693281 20693602 -68810951 - AluJb SINE Alu -1 311 1 1806 114 40 4 chr17 20693608 20693918 -68810635 - AluSq SINE Alu 0 320 1 3320 168 91 15 chr17 20693918 20694571 -68809982 + L1MD2 LINE L1 5581 6299 -60 855 135 8 0 chr17 20694571 20694697 -68809856 - AluJb SINE Alu -185 127 1 281 162 73 0 chr17 20694697 20694765 -68809788 + L1MD2 LINE L1 6287 6359 0 26 64 0 0 chr17 20695027 20695074 -68809479 + AT_rich Low_complexity Low_complexity 1 47 0 612 285 97 31 chr17 20695129 20695448 -68809105 - L1ME LINE L1 -404 5717 5378 2227 105 10 13 chr17 20695509 20695822 -68808731 + AluSq SINE Alu 1 312 -1 29 0 0 0 chr17 20696990 20697019 -68807534 + AT_rich Low_complexity Low_complexity 1 29 0 303 274 25 83 chr17 20697041 20697116 -68807437 - MIR SINE MIR -45 217 154 2336 56 25 3 chr17 20697116 20697400 -68807153 - AluY SINE Alu -19 292 3 303 274 25 83 chr17 20697400 20697481 -68807072 - MIR SINE MIR -108 154 70 225 94 0 0 chr17 20697721 20697753 -68806800 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 1397 104 6 0 chr17 20697756 20697938 -68806615 - AluSq SINE Alu -129 184 2 741 189 0 15 chr17 20697970 20698102 -68806451 + FLAM_A SINE Alu 1 130 -3 307 314 69 32 chr17 20698131 20698478 -68806075 - L1MEd LINE L1 -5219 900 541 489 264 44 13 chr17 20698509 20698668 -68805885 + MER46C DNA MER2_type 163 326 -12 2056 109 0 0 chr17 20698817 20699082 -68805471 - AluSg SINE Alu -20 290 26 327 247 118 17 chr17 20699222 20699410 -68805143 - L1ME1 LINE L1 -32 6412 6198 2354 100 0 7 chr17 20699410 20699720 -68804833 - AluSx SINE Alu 0 312 5 327 247 118 17 chr17 20699720 20699733 -68804820 - L1ME1 LINE L1 -246 6198 6188 1402 213 67 53 chr17 20699735 20699869 -68804684 - L1ME1 LINE L1 -984 5422 5291 2333 88 0 30 chr17 20699869 20700174 -68804379 + AluY SINE Alu 1 296 -15 1402 213 67 53 chr17 20700174 20700475 -68804078 - L1ME1 LINE L1 -1115 5291 4981 * 3722 222 78 44 chr17 20700468 20700612 -68803941 - L1ME1 LINE L1 -2492 3914 3776 2059 147 0 3 chr17 20700612 20700911 -68803642 - AluSx SINE Alu -13 299 2 3722 222 78 44 chr17 20700911 20702156 -68802397 - L1ME1 LINE L1 -2630 3776 2519 2066 117 3 3 chr17 20702156 20702480 -68802073 - AluSq SINE Alu 0 324 1 3722 222 78 44 chr17 20702480 20702573 -68801980 - L1ME1 LINE L1 -3887 2519 2431 21 57 0 0 chr17 20702609 20702644 -68801909 + AT_rich Low_complexity Low_complexity 1 35 0 417 218 38 97 chr17 20702654 20702749 -68801804 - L1ME1 LINE L1 -4007 2399 2300 9198 48 11 165 chr17 20702749 20704363 -68800190 - SVA Other Other -2 1384 19 417 218 38 97 chr17 20704363 20704406 -68800147 - L1ME1 LINE L1 -4106 2300 2256 194 61 0 30 chr17 20704406 20704439 -68800114 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1497 104 5 10 chr17 20704440 20704641 -68799912 - AluSx SINE Alu -112 200 1 417 218 38 97 chr17 20704641 20704788 -68799765 - L1ME1 LINE L1 -4149 2257 2128 2362 81 7 7 chr17 20704865 20705172 -68799381 - AluSc SINE Alu -2 307 1 1285 264 77 39 chr17 20705175 20705799 -68798754 - L1ME1 LINE L1 -4988 1421 804 272 28 0 0 chr17 20706661 20706697 -68797856 - AluY SINE Alu -5 296 261 * 1937 117 24 0 chr17 20706695 20706986 -68797567 - HSMAR2 DNA Mariner -1001 301 4 189 0 0 0 chr17 20707983 20708004 -68796549 + (A)n Simple_repeat Simple_repeat 1 21 0 812 270 108 0 chr17 20708080 20708302 -68796251 - MIR SINE MIR -11 251 6 216 0 0 0 chr17 20708362 20708386 -68796167 + (A)n Simple_repeat Simple_repeat 1 24 0 198 0 0 0 chr17 20708385 20708407 -68796146 + (TA)n Simple_repeat Simple_repeat 2 23 0 * 309 219 10 62 chr17 20708407 20708503 -68796050 + L1MC4 LINE L1 6614 6704 -1338 320 197 122 48 chr17 20708551 20708698 -68795855 - MER112 DNA MER1_type -97 163 6 252 259 35 0 chr17 20709577 20709635 -68794918 + MIR SINE MIR 75 134 -74 404 196 9 37 chr17 20709875 20709982 -68794571 - L2 LINE L2 -758 2556 2453 1964 83 11 23 chr17 20709985 20710274 -68794279 - AluSc SINE Alu 0 304 19 969 239 97 10 chr17 20710341 20710650 -68793903 - L2 LINE L2 -1648 1666 1331 4614 161 28 28 chr17 20710698 20711473 -68793080 - MER21B LTR ERV1 -49 814 37 1674 170 41 0 chr17 20711473 20711767 -68792786 + AluJo SINE Alu 1 306 -6 4614 161 28 28 chr17 20711767 20711805 -68792748 - MER21B LTR ERV1 -825 38 1 425 272 103 0 chr17 20711813 20711949 -68792604 - L2 LINE L2 -2001 1313 1164 520 308 121 21 chr17 20712031 20712404 -68792149 - L1ME LINE L1 -407 5714 5305 209 267 279 0 chr17 20714970 20715056 -68789497 - L2 LINE L2 -8 3264 3155 1891 131 16 20 chr17 20715630 20715935 -68788618 + AluJb SINE Alu 1 304 -8 184 235 24 129 chr17 20716039 20716124 -68788429 + MER5A DNA MER1_type 1 76 -113 2266 110 0 0 chr17 20716125 20716424 -68788129 + AluSx SINE Alu 1 299 -13 1553 108 0 9 chr17 20716444 20716656 -68787897 + AluSq SINE Alu 10 219 -94 314 328 8 33 chr17 20716678 20716800 -68787753 - MER5A DNA MER1_type -50 139 21 * 562 283 45 7 chr17 20716772 20716939 -68787614 - MIR3 SINE MIR -39 169 18 2441 99 0 0 chr17 20717130 20717442 -68787111 - AluSx SINE Alu 0 312 1 380 194 83 0 chr17 20718533 20718605 -68785948 + Tigger3b DNA MER2_type 1 78 -1153 227 295 0 0 chr17 20718621 20718716 -68785837 + A-rich Low_complexity Low_complexity 1 95 0 245 143 0 0 chr17 20718716 20718751 -68785802 + Tigger3b DNA MER2_type 65 99 -1132 5968 84 63 1 chr17 20718753 20719611 -68784942 + Tigger3b DNA MER2_type 275 1185 -46 261 0 0 0 chr17 20719623 20719652 -68784901 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 1893 152 4 0 chr17 20719652 20719929 -68784624 - AluSx SINE Alu -32 280 3 472 273 30 30 chr17 20719931 20720096 -68784457 + MIR SINE MIR 98 262 0 1036 156 0 0 chr17 20720141 20720295 -68784258 + AluJb SINE Alu 128 281 -31 2357 84 3 0 chr17 20720441 20720728 -68783825 + AluSp SINE Alu 1 288 -25 24 0 0 0 chr17 20720728 20720752 -68783801 + AT_rich Low_complexity Low_complexity 1 24 0 295 276 204 0 chr17 20721228 20721326 -68783227 - L2 LINE L2 -4 3268 3151 2325 108 0 0 chr17 20721343 20721650 -68782903 + AluSq SINE Alu 1 307 -6 25 31 0 0 chr17 20721787 20721819 -68782734 + AT_rich Low_complexity Low_complexity 1 32 0 290 321 113 12 chr17 20721870 20722038 -68782515 + L1MC/D LINE L1 5508 5692 -2116 2214 112 7 7 chr17 20722190 20722493 -68782060 - AluSx SINE Alu -9 303 1 2298 119 0 0 chr17 20722971 20723282 -68781271 + AluSx SINE Alu 1 311 -1 866 177 186 53 chr17 20723511 20723653 -68780900 - AluJo SINE Alu -13 299 177 2146 104 3 0 chr17 20723653 20723940 -68780613 + AluSg SINE Alu 1 288 -22 866 177 186 53 chr17 20723940 20724023 -68780530 - AluJo SINE Alu -135 177 44 830 129 0 16 chr17 20724026 20724150 -68780403 - FLAM_C SINE Alu -10 133 12 241 297 145 36 chr17 20724246 20724384 -68780169 - MIR SINE MIR -51 211 59 2245 102 0 37 chr17 20724643 20724965 -68779588 - AluSg SINE Alu 0 310 1 986 209 44 29 chr17 20725024 20725297 -68779256 - L1ME3A LINE L1 0 6170 5894 3153 169 100 42 chr17 20725302 20725770 -68778783 - L1MB7 LINE L1 -11 6173 5637 2194 98 24 10 chr17 20725770 20726067 -68778486 - AluSx SINE Alu -11 301 1 3153 169 100 42 chr17 20726067 20726407 -68778146 - L1MB7 LINE L1 -547 5637 5318 2142 123 0 16 chr17 20726408 20726724 -68777829 - AluSx SINE Alu -1 311 1 2298 105 3 0 chr17 20726728 20727033 -68777520 - AluSq SINE Alu -7 306 1 779 142 0 0 chr17 20727038 20727144 -68777409 - FLAM_C SINE Alu -36 107 2 558 182 45 8 chr17 20727145 20727277 -68777276 - L1MB7 LINE L1 -814 5332 5196 1476 202 15 4 chr17 20727301 20727596 -68776957 - AluJb SINE Alu 0 309 12 1461 98 0 10 chr17 20727629 20727823 -68776730 - AluSq SINE Alu -121 192 1 2854 216 93 19 chr17 20727825 20728607 -68775946 - L1MB7 LINE L1 -1584 4562 3723 688 170 0 111 chr17 20728630 20728801 -68775752 - L1M4 LINE L1 -1279 4867 4716 299 177 32 16 chr17 20728803 20728865 -68775688 - L1MB7 LINE L1 -2478 3668 3606 * 521 268 62 64 chr17 20728859 20729166 -68775387 - L1MC4a LINE L1 -407 5777 5598 180 0 0 0 chr17 20729469 20729489 -68775064 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1745 154 0 0 chr17 20729493 20729753 -68774800 - AluSx SINE Alu -25 287 28 638 235 0 0 chr17 20729787 20729906 -68774647 + AluJb SINE Alu 142 260 -52 30 59 0 0 chr17 20730305 20730356 -68774197 + AT_rich Low_complexity Low_complexity 1 51 0 598 204 144 0 chr17 20730381 20730513 -68774040 + MIR SINE MIR 2 152 -110 2389 78 0 3 chr17 20730836 20731131 -68773422 + AluY SINE Alu 1 294 -17 2356 84 3 3 chr17 20731284 20731593 -68772960 + AluSx SINE Alu 1 309 -3 2196 119 0 0 chr17 20731739 20732042 -68772511 - AluY SINE Alu -7 304 2 853 113 65 0 chr17 20732118 20732242 -68772311 + AluSq/x SINE Alu 3 134 -179 523 169 0 0 chr17 20732457 20732534 -68772019 - AluS SINE Alu -235 78 2 26 50 0 0 chr17 20732952 20732992 -68771561 + AT_rich Low_complexity Low_complexity 1 40 0 854 147 0 0 chr17 20732992 20733108 -68771445 - FLAM_C SINE Alu -27 116 1 2213 88 35 0 chr17 20733206 20733490 -68771063 + AluSc SINE Alu 1 294 -15 366 309 50 7 chr17 20733529 20733668 -68770885 - L1MC4a LINE L1 -757 5407 5263 2309 105 0 40 chr17 20733776 20734101 -68770452 - AluSx SINE Alu 0 312 1 256 242 70 39 chr17 20734170 20734298 -68770255 - L1MC4a LINE L1 -1389 4757 4626 34 0 0 22 chr17 20734934 20734953 -68769600 + AT_rich Low_complexity Low_complexity 1 19 -25 2042 156 3 0 chr17 20734953 20735260 -68769293 - AluSx SINE Alu -4 308 1 34 0 0 22 chr17 20735260 20735285 -68769268 + AT_rich Low_complexity Low_complexity 19 44 0 3393 45 2 8 chr17 20735339 20735736 -68768817 + L1PA6 LINE L1 5758 6152 -2 1077 114 67 0 chr17 20736042 20736191 -68768362 + AluSc SINE Alu 1 159 -150 1382 110 57 24 chr17 20736195 20736404 -68768149 - AluSq SINE Alu -97 216 1 2428 91 0 7 chr17 20736414 20736723 -68767830 - AluSg SINE Alu -3 307 1 1408 117 132 49 chr17 20736729 20736995 -68767558 - AluSx SINE Alu -10 302 15 675 270 0 38 chr17 20737027 20737186 -68767367 + AluJb SINE Alu 142 294 -18 2328 96 0 3 chr17 20737367 20737679 -68766874 - AluY SINE Alu 0 311 1 2289 84 0 7 chr17 20737682 20738006 -68766547 - AluY SINE Alu 0 311 1 1228 252 136 31 chr17 20738248 20738971 -68765582 - L2 LINE L2 0 3313 2509 336 294 109 0 chr17 20739164 20739256 -68765297 - L2 LINE L2 0 3272 3171 273 294 101 0 chr17 20739311 20739420 -68765133 - L1MC5 LINE L1 -519 7442 7323 496 316 81 60 chr17 20739727 20740004 -68764549 + L2 LINE L2 2816 3086 -227 1603 176 76 0 chr17 20740004 20740293 -68764260 - AluJb SINE Alu -1 311 1 496 316 81 60 chr17 20740293 20740362 -68764191 + L2 LINE L2 3086 3152 -161 1655 178 13 10 chr17 20740362 20740660 -68763893 + AluJo SINE Alu 1 299 -13 496 316 81 60 chr17 20740660 20740796 -68763757 + L2 LINE L2 3152 3309 -4 218 264 0 143 chr17 20741048 20741077 -68763476 - MIR SINE MIR -62 146 114 1834 138 6 44 chr17 20741077 20741210 -68763343 + AluSx SINE Alu 3 139 -173 2251 94 3 3 chr17 20741210 20741508 -68763045 + AluSg SINE Alu 1 298 -12 1834 138 6 44 chr17 20741508 20741692 -68762861 + AluSx SINE Alu 139 308 -4 218 264 0 143 chr17 20741692 20741753 -68762800 - MIR SINE MIR -94 114 69 2082 107 17 33 chr17 20741937 20742093 -68762460 - AluSx SINE Alu -18 294 144 1914 146 0 7 chr17 20742093 20742387 -68762166 - AluSx SINE Alu 0 312 21 2082 107 17 33 chr17 20742387 20742529 -68762024 - AluSx SINE Alu -168 144 1 2449 74 13 0 chr17 20742796 20743105 -68761448 - AluSp SINE Alu 0 313 1 2096 131 7 0 chr17 20744319 20744616 -68759937 - AluSx SINE Alu -13 299 1 256 286 12 0 chr17 20745591 20745675 -68758878 + L1MEc LINE L1 77 161 -6235 1381 279 76 56 chr17 20745684 20745741 -68758812 + L1MEc LINE L1 260 314 -6082 1985 81 77 0 chr17 20745741 20746013 -68758540 + AluSq SINE Alu 1 293 -20 1381 279 76 56 chr17 20746013 20746497 -68758056 + L1MEc LINE L1 314 787 -5609 2133 107 0 3 chr17 20746497 20746796 -68757757 + AluSq SINE Alu 1 298 -15 1381 279 76 56 chr17 20746796 20746957 -68757596 + L1MEc LINE L1 787 983 -5413 1847 114 42 39 chr17 20746957 20747265 -68757288 + AluSg SINE Alu 1 309 -1 1381 279 76 56 chr17 20747265 20747333 -68757220 + L1MEc LINE L1 983 1048 -5348 2213 92 3 7 chr17 20747343 20747647 -68756906 + AluSp SINE Alu 1 303 -10 219 300 67 50 chr17 20747695 20747815 -68756738 + MIR3 SINE MIR 84 205 -3 326 353 49 0 chr17 20748047 20748169 -68756384 - L1ME LINE L1 -417 5704 5577 318 272 179 19 chr17 20748189 20748351 -68756202 + MIR SINE MIR 68 255 -7 21 36 0 0 chr17 20749292 20749320 -68755233 + AT_rich Low_complexity Low_complexity 1 28 0 189 74 0 0 chr17 20749630 20749657 -68754896 + (TA)n Simple_repeat Simple_repeat 1 27 0 24 85 0 0 chr17 20749844 20749903 -68754650 + AT_rich Low_complexity Low_complexity 1 59 0 2112 111 3 7 chr17 20751146 20751453 -68753100 + AluSx SINE Alu 1 306 -6 1918 149 0 3 chr17 20751458 20751754 -68752799 + AluSx SINE Alu 1 295 -17 2217 98 0 0 chr17 20751757 20752052 -68752501 + AluY SINE Alu 1 295 -16 1669 108 100 18 chr17 20752056 20752335 -68752218 + AluSq SINE Alu 1 302 -11 2291 86 3 0 chr17 20752550 20752851 -68751702 - AluSp SINE Alu -11 302 1 243 219 154 81 chr17 20754156 20754279 -68750274 - L2 LINE L2 -4 3309 3178 2214 78 3 10 chr17 20754314 20754609 -68749944 + AluY SINE Alu 1 293 -18 188 232 313 30 chr17 20755125 20755224 -68749329 - MIR SINE MIR 0 262 136 786 108 18 0 chr17 20755231 20755342 -68749211 - FLAM_C SINE Alu -10 133 21 334 164 134 30 chr17 20755344 20755411 -68749142 - MER5A DNA MER1_type -115 74 1 393 278 119 0 chr17 20755970 20756096 -68748457 - L2 LINE L2 0 3313 3173 25 65 0 0 chr17 20757019 20757065 -68747488 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr17 20757153 20757176 -68747377 + AT_rich Low_complexity Low_complexity 1 23 0 1842 93 3 80 chr17 20757229 20757530 -68747023 - AluSx SINE Alu -34 278 1 2136 235 64 10 chr17 20758015 20758264 -68746289 + Charlie1a DNA MER1_type 1 235 -2526 2094 111 3 3 chr17 20758264 20758561 -68745992 + AluSx SINE Alu 2 298 -14 2136 235 64 10 chr17 20758561 20758830 -68745723 + Charlie1a DNA MER1_type 235 547 -908 1604 144 67 3 chr17 20758830 20759114 -68745439 - AluJo SINE Alu -4 308 7 1072 148 38 63 chr17 20759119 20759192 -68745361 + Charlie1a DNA MER1_type 733 806 -1955 1819 123 47 36 chr17 20759192 20759493 -68745060 - AluSx SINE Alu -8 304 1 729 191 0 8 chr17 20759501 20759627 -68744926 - FLAM_C SINE Alu -8 125 1 1072 148 38 63 chr17 20759627 20759781 -68744772 + Charlie1a DNA MER1_type 813 963 -492 2218 102 10 0 chr17 20759790 20760095 -68744458 + AluSp SINE Alu 1 308 -5 750 103 0 19 chr17 20760096 20760203 -68744350 + LTR7 LTR ERV1 346 450 0 1877 203 27 55 chr17 20760215 20760741 -68743812 + HERVH LTR ERV1 12 522 -7191 * 13150 136 6 8 chr17 20760711 20762744 -68741809 + HERVH LTR ERV1 801 2830 -4883 4010 148 0 5 chr17 20762744 20763384 -68741169 + HERVH LTR ERV1 3357 3993 -3720 3561 166 2 21 chr17 20763370 20764018 -68740535 + HERVH LTR ERV1 3949 4551 -2735 * 1442 161 28 0 chr17 20764009 20764263 -68740290 + HERVH LTR ERV1 5756 6016 -1697 * 3921 95 7 9 chr17 20764256 20764814 -68739739 + HERVH LTR ERV1 7157 7713 0 894 162 107 54 chr17 20764814 20765155 -68739398 + LTR7 LTR ERV1 1 402 -48 306 50 0 0 chr17 20765155 20765195 -68739358 + (CA)n Simple_repeat Simple_repeat 1 40 0 2306 76 0 13 chr17 20765197 20765512 -68739041 + AluY SINE Alu 1 311 0 1893 142 7 0 chr17 20765545 20765847 -68738706 + AluSg SINE Alu 1 304 -6 1211 177 110 0 chr17 20765863 20766173 -68738380 + Charlie1a DNA MER1_type 1014 1357 -98 1967 143 0 0 chr17 20766205 20766499 -68738054 + AluSx SINE Alu 1 294 -18 2219 86 6 19 chr17 20766628 20766943 -68737610 + AluSq SINE Alu 1 311 -2 1580 160 22 41 chr17 20766955 20767455 -68737098 + AluJb SINE Alu 1 494 0 205 118 59 0 chr17 20767455 20767489 -68737064 + GA-rich Low_complexity Low_complexity 1 36 0 933 218 9 18 chr17 20767496 20767725 -68736828 + AluJb SINE Alu 85 311 -1 1601 153 57 3 chr17 20767787 20768069 -68736484 + AluJo SINE Alu 3 299 -13 2027 102 51 3 chr17 20768071 20768366 -68736187 + AluSp SINE Alu 1 309 -4 26 30 0 0 chr17 20768391 20768424 -68736129 + AT_rich Low_complexity Low_complexity 1 33 0 2361 77 0 0 chr17 20768539 20768838 -68735715 + AluY SINE Alu 1 299 -12 21 71 0 0 chr17 20768924 20768966 -68735587 + AT_rich Low_complexity Low_complexity 1 42 0 2144 102 7 0 chr17 20769129 20769422 -68735131 - AluSx SINE Alu -17 295 1 753 197 0 0 chr17 20769447 20769569 -68734984 + FLAM_C SINE Alu 2 123 -20 186 43 0 0 chr17 20769570 20769593 -68734960 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 321 200 24 47 chr17 20769597 20769682 -68734871 - MLT1H1 LTR MaLR -77 478 396 704 278 163 10 chr17 20769870 20770165 -68734388 - L1ME3A LINE L1 -274 5896 5557 1131 79 6 0 chr17 20770172 20770337 -68734216 - AluY SINE Alu -10 301 136 2529 40 0 0 chr17 20770337 20770640 -68733913 - AluY SINE Alu -8 303 1 3347 146 15 58 chr17 20770646 20770701 -68733852 - MER49 LTR ERV1 0 923 867 2307 40 34 10 chr17 20770701 20770999 -68733554 - AluY SINE Alu -6 305 1 3347 146 15 58 chr17 20770999 20771382 -68733171 - MER49 LTR ERV1 -56 867 516 1731 88 0 92 chr17 20771382 20771564 -68732989 - AluSx SINE Alu -18 294 146 1875 72 0 34 chr17 20771564 20771828 -68732725 - AluY SINE Alu -2 309 55 1731 88 0 92 chr17 20771828 20771928 -68732625 - AluSx SINE Alu -166 146 38 3347 146 15 58 chr17 20771928 20772097 -68732456 - MER49 LTR ERV1 -407 516 341 742 188 0 8 chr17 20772101 20772229 -68732324 + FRAM SINE Alu 28 154 -22 1123 125 0 0 chr17 20772229 20772389 -68732164 - AluSq SINE Alu -20 293 134 2084 116 3 0 chr17 20772389 20772690 -68731863 - AluSx SINE Alu -10 302 1 1645 130 47 14 chr17 20772694 20772970 -68731583 - AluSq SINE Alu -16 297 13 308 125 0 0 chr17 20773225 20773265 -68731288 - Alu SINE Alu -267 41 2 1884 138 31 0 chr17 20773310 20773599 -68730954 + AluSg SINE Alu 3 300 -10 939 201 12 0 chr17 20773609 20773773 -68730780 + FRAM SINE Alu 1 166 0 512 191 109 18 chr17 20774126 20774236 -68730317 + FLAM_C SINE Alu 2 121 -12 203 172 52 0 chr17 20774240 20774298 -68730255 + (TA)n Simple_repeat Simple_repeat 1 61 0 922 298 54 17 chr17 20774302 20774778 -68729775 - L2 LINE L2 -69 3244 2702 4150 163 17 30 chr17 20774818 20775147 -68729406 - L1PB4 LINE L1 -2 6154 5822 2145 98 0 10 chr17 20775147 20775443 -68729110 - AluSg SINE Alu -17 293 1 4150 163 17 30 chr17 20775443 20775887 -68728666 - L1PB4 LINE L1 -334 5822 5391 1286 167 11 57 chr17 20775887 20776150 -68728403 - L1MC1 LINE L1 0 6333 6083 277 114 0 0 chr17 20776171 20776215 -68728338 - L1M4 LINE L1 -2192 3954 3911 2141 107 3 0 chr17 20777007 20777316 -68727237 - AluSq SINE Alu -3 310 1 364 248 50 10 chr17 20777434 20777535 -68727018 - MIR SINE MIR -109 153 49 580 201 15 30 chr17 20777606 20777740 -68726813 - Charlie1 DNA MER1_type -1 2760 2629 1221 209 59 14 chr17 20777740 20778027 -68726526 + AluJo SINE Alu 1 300 -12 965 115 0 38 chr17 20778032 20778189 -68726364 + AluSq/x SINE Alu 1 151 -162 306 133 0 0 chr17 20778189 20778234 -68726319 - AluSg/x SINE Alu -83 217 173 1829 128 4 0 chr17 20778384 20778657 -68725896 - AluSx SINE Alu -18 294 21 23 33 0 0 chr17 20778780 20778810 -68725743 + AT_rich Low_complexity Low_complexity 1 30 0 368 281 128 20 chr17 20779049 20779252 -68725301 + LTR16A LTR ERVL 219 443 -7 2156 129 0 0 chr17 20779346 20779656 -68724897 - AluSx SINE Alu -2 310 1 510 217 9 17 chr17 20779746 20779861 -68724692 + MER21B LTR ERV1 323 436 -427 198 317 32 49 chr17 20780162 20780285 -68724268 + L2 LINE L2 2963 3083 -189 414 78 0 0 chr17 20780285 20780336 -68724217 - AluSq/x SINE Alu -203 109 59 541 217 0 0 chr17 20780336 20780428 -68724125 - MER21B LTR ERV1 -449 414 323 871 194 0 29 chr17 20780509 20780684 -68723869 - AluJo SINE Alu -142 170 1 2403 75 0 0 chr17 20780695 20781001 -68723552 - AluY SINE Alu -5 306 1 2427 77 0 0 chr17 20781015 20781326 -68723227 - AluY SINE Alu 0 311 1 1020 147 6 0 chr17 20781860 20782016 -68722537 - AluSg/x SINE Alu -21 291 135 507 33 0 0 chr17 20782016 20782077 -68722476 + (TG)n Simple_repeat Simple_repeat 1 61 0 1995 124 0 0 chr17 20782077 20782359 -68722194 - AluSq SINE Alu -31 282 1 2071 113 0 17 chr17 20782781 20783082 -68721471 + AluSx SINE Alu 1 296 -16 2282 53 0 7 chr17 20783504 20783811 -68720742 + AluY SINE Alu 1 305 0 1990 129 0 3 chr17 20783823 20784117 -68720436 + AluSx SINE Alu 1 293 -19 2137 125 3 0 chr17 20784119 20784423 -68720130 + AluSx SINE Alu 1 305 -7 27 29 0 0 chr17 20786177 20786211 -68718342 + GC_rich Low_complexity Low_complexity 1 34 0 1988 74 0 44 chr17 20786969 20787288 -68717265 - AluSx SINE Alu 0 306 1 439 299 25 13 chr17 20788222 20788379 -68716174 - MER103 DNA DNA -6 160 2 21 36 0 0 chr17 20788577 20788605 -68715948 + AT_rich Low_complexity Low_complexity 1 28 0 38 22 0 0 chr17 20788703 20788748 -68715805 + AT_rich Low_complexity Low_complexity 1 45 0 1920 117 7 23 chr17 20789015 20789314 -68715239 - AluSx SINE Alu -18 294 1 872 159 0 0 chr17 20789343 20789475 -68715078 - FLAM_C SINE Alu -1 132 1 21 71 0 0 chr17 20789504 20789546 -68715007 + AT_rich Low_complexity Low_complexity 1 42 0 1035 161 0 6 chr17 20789822 20790002 -68714551 + AluJo SINE Alu 123 301 -11 487 206 43 85 chr17 20790253 20790272 -68714281 - L2 LINE L2 0 3313 3295 1967 122 7 3 chr17 20790272 20790567 -68713986 - AluSq SINE Alu -17 296 1 487 206 43 85 chr17 20790567 20790688 -68713865 - L2 LINE L2 -18 3295 3179 2044 124 7 3 chr17 20790733 20791031 -68713522 + AluSp SINE Alu 1 299 -14 2084 115 7 0 chr17 20791112 20791407 -68713146 + AluSx SINE Alu 9 305 -7 2364 64 3 0 chr17 20791936 20792234 -68712319 - AluY SINE Alu -12 299 1 922 133 7 0 chr17 20792413 20792556 -68711997 - AluSp/q SINE Alu -9 304 161 593 70 0 0 chr17 20792566 20792637 -68711916 - tRNA-Gly-GGG tRNA tRNA -3 71 1 2235 90 3 0 chr17 20792675 20792974 -68711579 + AluSp SINE Alu 1 300 -13 445 264 71 72 chr17 20793467 20793543 -68711010 - L1ME LINE L1 -331 5835 5760 1463 185 17 31 chr17 20793543 20793835 -68710718 + AluJo SINE Alu 1 288 -24 445 264 71 72 chr17 20793835 20793999 -68710554 - L1ME LINE L1 -406 5760 5600 1782 116 8 19 chr17 20794019 20794287 -68710266 - AluSq SINE Alu -48 265 1 23 0 0 0 chr17 20794317 20794340 -68710213 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr17 20794351 20794395 -68710158 + AT_rich Low_complexity Low_complexity 1 44 0 848 121 17 0 chr17 20794395 20794511 -68710042 - AluJb SINE Alu -194 118 1 187 43 0 0 chr17 20794524 20794547 -68710006 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2177 109 3 0 chr17 20794547 20794831 -68709722 - AluSq SINE Alu -28 285 1 549 255 107 79 chr17 20795005 20795098 -68709455 - L2 LINE L2 -64 3208 3119 1949 163 0 0 chr17 20795098 20795399 -68709154 - AluJb SINE Alu -9 303 3 549 255 107 79 chr17 20795399 20795824 -68708729 - L2 LINE L2 -153 3119 2688 299 280 48 16 chr17 20795934 20796059 -68708494 + L1ME2 LINE L1 4888 5016 -1130 2234 106 0 7 chr17 20796192 20796495 -68708058 - AluSx SINE Alu -11 301 1 2412 76 0 16 chr17 20796514 20796828 -68707725 - AluY SINE Alu -2 309 1 1120 207 48 27 chr17 20796875 20796919 -68707634 + L1ME2 LINE L1 5812 5854 -310 2487 60 0 0 chr17 20796919 20797218 -68707335 - AluY SINE Alu -12 299 1 1120 207 48 27 chr17 20797218 20797468 -68707085 + L1ME2 LINE L1 5854 6112 -52 874 160 0 77 chr17 20797468 20797649 -68706904 - FRAM SINE Alu -8 168 2 1501 122 0 0 chr17 20797890 20798095 -68706458 - AluSg/x SINE Alu 0 312 108 2624 46 0 0 chr17 20798095 20798397 -68706156 - AluY SINE Alu -9 302 1 2088 120 0 3 chr17 20798404 20798696 -68705857 - AluSg SINE Alu -15 295 5 1835 129 87 0 chr17 20799215 20799502 -68705051 - AluSx SINE Alu 0 312 1 474 154 0 55 chr17 20799557 20799648 -68704905 + MLT1A2 LTR MaLR 1 87 -279 2427 67 0 3 chr17 20799648 20799945 -68704608 + AluY SINE Alu 1 296 -15 1930 148 0 25 chr17 20800080 20800398 -68704155 + AluJb SINE Alu 1 310 -2 2434 67 0 7 chr17 20800568 20800696 -68703857 + AluY SINE Alu 1 128 -183 180 0 0 0 chr17 20800696 20800716 -68703837 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2434 67 0 7 chr17 20800716 20800885 -68703668 + AluY SINE Alu 128 296 -15 25 51 0 0 chr17 20801106 20801145 -68703408 + AT_rich Low_complexity Low_complexity 1 39 0 2373 81 7 0 chr17 20801217 20801512 -68703041 - AluY SINE Alu -12 299 3 1128 135 0 0 chr17 20801515 20801678 -68702875 - AluY SINE Alu -16 295 133 2171 96 3 63 chr17 20801678 20802010 -68702543 - AluSx SINE Alu 0 312 1 2211 121 0 6 chr17 20802083 20802397 -68702156 - AluSx SINE Alu 0 312 1 2207 103 0 42 chr17 20802400 20802710 -68701843 - AluSx SINE Alu -15 297 1 822 196 0 0 chr17 20802710 20802843 -68701710 - AluJo SINE Alu -178 134 2 2261 61 10 31 chr17 20802903 20803196 -68701357 - AluY SINE Alu -24 287 1 21 57 0 0 chr17 20804021 20804056 -68700497 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr17 20804180 20804202 -68700351 + AT_rich Low_complexity Low_complexity 1 22 0 2309 95 0 0 chr17 20804938 20805232 -68699321 - AluSg SINE Alu -5 305 12 27 29 0 0 chr17 20805581 20805615 -68698938 + AT_rich Low_complexity Low_complexity 1 34 0 458 71 0 0 chr17 20805615 20805671 -68698882 - U6 snRNA snRNA -51 56 1 445 246 126 24 chr17 20805694 20805861 -68698692 - MIR SINE MIR -71 191 8 1913 138 10 3 chr17 20805893 20806183 -68698370 + AluSx SINE Alu 1 292 -20 2292 104 0 0 chr17 20807084 20807381 -68697172 - AluSx SINE Alu -15 297 1 2114 100 0 53 chr17 20807591 20807912 -68696641 - AluSx SINE Alu -8 304 1 188 200 0 0 chr17 20807950 20807980 -68696573 - MIR3 SINE MIR -32 176 147 186 384 41 14 chr17 20807980 20808023 -68696530 - L3b LINE CR1 -28 1555 1481 40 0 0 0 chr17 20809152 20809192 -68695361 + AT_rich Low_complexity Low_complexity 1 40 0 549 220 59 8 chr17 20809315 20809433 -68695120 + FLAM_A SINE Alu 1 124 -9 302 255 31 10 chr17 20809660 20809758 -68694795 - L1MC4 LINE L1 -18 8024 7925 2340 95 0 3 chr17 20809781 20810086 -68694467 + AluSg SINE Alu 1 304 -6 2687 51 3 0 chr17 20811243 20811555 -68692998 + AluSp SINE Alu 1 313 0 2047 117 0 39 chr17 20812838 20813146 -68691407 - AluSx SINE Alu -16 296 1 21 36 0 0 chr17 20813156 20813184 -68691369 + AT_rich Low_complexity Low_complexity 1 28 0 294 243 278 28 chr17 20813678 20813752 -68690801 - L1MC/D LINE L1 -2020 5788 5734 267 31 0 0 chr17 20813752 20813784 -68690769 + (TG)n Simple_repeat Simple_repeat 2 33 0 294 243 278 28 chr17 20813784 20813853 -68690700 - L1MC/D LINE L1 -2074 5734 5609 320 294 70 48 chr17 20813883 20814049 -68690504 - L1MC/D LINE L1 -2271 5537 5365 2189 126 10 0 chr17 20814049 20814358 -68690195 - AluSx SINE Alu 0 312 1 320 294 70 48 chr17 20814358 20814378 -68690175 - L1MC/D LINE L1 -2443 5365 5347 2421 81 0 13 chr17 20814685 20814995 -68689558 - AluY SINE Alu -5 306 1 1990 222 97 19 chr17 20815361 20816285 -68688268 - L2 LINE L2 -1 3312 2223 1851 152 0 11 chr17 20816289 20816600 -68687953 - AluJb SINE Alu 0 313 6 1674 181 0 74 chr17 20816630 20816806 -68687747 - AluJo SINE Alu 0 302 115 240 35 0 0 chr17 20816806 20816835 -68687718 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2242 85 0 4 chr17 20816835 20817116 -68687437 - AluSg1 SINE Alu -29 280 1 1953 102 0 102 chr17 20817118 20817308 -68687245 - AluSq SINE Alu -13 300 157 2394 99 0 0 chr17 20817308 20817612 -68686941 - AluSg SINE Alu -6 304 1 1953 102 0 102 chr17 20817612 20817755 -68686798 - AluSq SINE Alu -156 157 1 1674 181 0 74 chr17 20817755 20817900 -68686653 - AluJo SINE Alu -187 115 1 2439 55 0 3 chr17 20818011 20818304 -68686249 - AluY SINE Alu -19 292 1 725 196 25 6 chr17 20818307 20818470 -68686083 - L1M4c LINE L1 -3106 3276 3111 253 248 79 0 chr17 20818471 20818572 -68685981 + MSTA LTR MaLR 1 109 -319 451 149 241 0 chr17 20818572 20818659 -68685894 - AluJb SINE Alu -203 109 2 630 168 134 28 chr17 20818659 20818838 -68685715 - L1M4c LINE L1 -3899 2485 2288 638 235 0 0 chr17 20819291 20819410 -68685143 - AluJb SINE Alu -52 260 142 1726 161 4 0 chr17 20819444 20819723 -68684830 + AluJb SINE Alu 28 307 -5 1056 192 39 32 chr17 20819725 20819836 -68684717 - L1 LINE L1 -2989 3393 3284 2075 134 7 13 chr17 20819836 20820141 -68684412 - AluSx SINE Alu -9 303 1 2098 130 0 7 chr17 20820143 20820442 -68684111 - AluSx SINE Alu -15 297 1 1056 192 39 32 chr17 20820442 20820608 -68683945 - L1 LINE L1 -3098 3284 3111 1191 153 129 69 chr17 20820609 20820941 -68683612 + THE1C LTR MaLR 1 339 -36 2074 128 3 0 chr17 20820941 20821239 -68683314 - AluSx SINE Alu -13 299 1 1191 153 129 69 chr17 20821239 20821279 -68683274 + THE1C LTR MaLR 339 375 0 254 132 29 29 chr17 20821281 20821349 -68683204 - L1 LINE L1 -3270 3112 3045 2407 191 105 47 chr17 20821408 20821483 -68683070 - L1 LINE L1 -3324 3058 2989 1528 197 7 27 chr17 20821483 20821782 -68682771 + AluJo SINE Alu 1 293 -19 2407 191 105 47 chr17 20821782 20822128 -68682425 - L1 LINE L1 -3393 2989 2665 2385 90 0 10 chr17 20822128 20822429 -68682124 - AluSg SINE Alu -12 298 1 1595 193 10 7 chr17 20822436 20822731 -68681822 - AluJb SINE Alu -16 296 1 2407 191 105 47 chr17 20822731 20822894 -68681659 - L1 LINE L1 -3722 2660 2508 1297 171 167 8 chr17 20822894 20823157 -68681396 - AluSx SINE Alu -7 305 1 2407 191 105 47 chr17 20823157 20824042 -68680511 - L1 LINE L1 -3874 2508 1393 2280 95 7 0 chr17 20824059 20824355 -68680198 - AluSp SINE Alu -15 298 1 277 331 74 51 chr17 20824561 20824736 -68679817 + MIR SINE MIR 4 182 -80 2514 53 0 7 chr17 20825009 20825311 -68679242 - AluY SINE Alu -11 300 1 35 63 0 0 chr17 20825568 20825631 -68678922 + AT_rich Low_complexity Low_complexity 1 63 0 2303 77 3 0 chr17 20825959 20826280 -68678273 - AluSp SINE Alu 0 322 1 1966 116 58 0 chr17 20826282 20826557 -68677996 - AluSx SINE Alu -21 291 1 228 303 75 30 chr17 20827020 20827183 -68677370 + MIR SINE MIR 20 184 -77 2062 101 50 7 chr17 20827510 20827807 -68676746 - AluSx SINE Alu -2 310 1 236 228 148 40 chr17 20827933 20828034 -68676519 + MIR SINE MIR 124 235 -27 205 321 168 10 chr17 20828215 20828411 -68676142 + MIR SINE MIR 36 262 0 802 204 0 39 chr17 20828763 20828944 -68675609 + AluJo SINE Alu 47 220 -92 250 118 0 39 chr17 20828944 20828995 -68675558 + FLAM_A SINE Alu 85 133 0 2196 123 0 0 chr17 20828999 20829308 -68675245 + AluY SINE Alu 1 309 -2 2048 142 0 19 chr17 20829317 20829633 -68674920 + AluSx SINE Alu 1 310 -2 1910 145 35 0 chr17 20829700 20829990 -68674563 + AluSx SINE Alu 1 300 -12 596 126 13 2 chr17 20829999 20830229 -68674324 + AluJ SINE Alu 1 287 -25 2286 93 0 0 chr17 20830671 20830960 -68673593 - AluSx SINE Alu -23 289 1 196 303 123 41 chr17 20830961 20831083 -68673470 - L2 LINE L2 0 3313 3182 817 211 0 0 chr17 20831326 20831482 -68673071 - MER3 DNA MER1_type -82 127 19 2512 70 0 0 chr17 20831638 20831939 -68672614 + AluSc SINE Alu 1 301 -8 608 317 94 57 chr17 20832296 20832899 -68671654 - L2 LINE L2 -941 2373 1723 2328 95 0 0 chr17 20832899 20833194 -68671359 + AluSg SINE Alu 14 308 -2 608 317 94 57 chr17 20833194 20833502 -68671051 - L2 LINE L2 -1591 1723 1428 224 300 138 0 chr17 20833539 20833619 -68670934 + MIR SINE MIR 54 144 -118 2372 54 0 4 chr17 20833645 20833924 -68670629 - AluY SINE Alu -13 298 21 241 69 0 0 chr17 20833924 20833953 -68670600 - AluY SINE Alu -257 42 14 195 273 18 0 chr17 20833972 20834027 -68670526 + MIR SINE MIR 204 259 -3 851 36 18 27 chr17 20836116 20836228 -68668325 - L1PA4 LINE L1 0 6155 6045 2244 82 3 70 chr17 20836405 20836736 -68667817 + AluSg SINE Alu 2 310 0 835 193 93 0 chr17 20836869 20837030 -68667523 + MER46A DNA MER2_type 1 176 -60 746 215 0 8 chr17 20837139 20837269 -68667284 + FLAM_C SINE Alu 2 130 -3 1450 169 135 4 chr17 20837274 20837540 -68667013 + AluJo SINE Alu 2 302 0 294 29 0 0 chr17 20837545 20837580 -68666973 + (TA)n Simple_repeat Simple_repeat 1 35 0 533 257 65 36 chr17 20837983 20838290 -68666263 - L1M4 LINE L1 -1449 4697 4382 446 204 124 9 chr17 20838293 20838406 -68666147 + L2 LINE L2 1874 1999 -1315 326 174 210 18 chr17 20838515 20838682 -68665871 - HAL1 LINE L1 -1314 1193 995 1083 263 93 55 chr17 20838698 20839150 -68665403 - HAL1 LINE L1 -1687 820 352 1981 196 18 25 chr17 20839226 20839619 -68664934 + MER47B DNA MER2_type 28 417 -1 279 317 49 7 chr17 20839619 20839761 -68664792 - L1MA9 LINE L1 -82 6230 6083 * 1125 233 52 0 chr17 20839759 20840029 -68664524 - HAL1 LINE L1 -2132 375 92 226 272 138 59 chr17 20840176 20840243 -68664310 - L1MC4a LINE L1 -1460 6348 6288 2350 107 0 7 chr17 20840243 20840552 -68664001 + AluSx SINE Alu 1 307 -5 226 272 138 59 chr17 20840552 20840738 -68663815 - L1MC4a LINE L1 -1520 6288 6075 224 301 0 32 chr17 20840791 20840884 -68663669 + L2 LINE L2 3065 3154 -159 868 142 8 0 chr17 20840885 20841012 -68663541 - FLAM_C SINE Alu -5 128 1 24 67 0 0 chr17 20841612 20841657 -68662896 + AT_rich Low_complexity Low_complexity 1 45 0 2368 98 3 0 chr17 20841728 20842035 -68662518 - AluY SINE Alu -3 308 1 1134 131 0 0 chr17 20842069 20842229 -68662324 - AluSg/x SINE Alu -19 293 134 2345 95 3 3 chr17 20842229 20842534 -68662019 - AluSx SINE Alu -7 305 1 5222 174 18 11 chr17 20842539 20843858 -68660695 - L1MB2 LINE L1 -3 6168 4839 1977 86 8 4 chr17 20843868 20844123 -68660430 - AluSq SINE Alu -20 293 38 307 244 35 23 chr17 20844123 20844209 -68660344 - MER119 DNA MER1_type -496 87 1 455 270 45 34 chr17 20846288 20846466 -68658087 - MLT1J LTR MaLR -331 180 1 253 169 28 28 chr17 20847479 20847550 -68657003 + (TA)n Simple_repeat Simple_repeat 2 72 0 316 284 57 11 chr17 20847638 20847726 -68656827 + HAL1 LINE L1 37 128 -2379 1008 104 0 15 chr17 20847749 20847884 -68656669 - FLAM_C SINE Alu 0 133 1 440 329 61 26 chr17 20848173 20848401 -68656152 + L1MC4a LINE L1 5668 5903 -1905 4880 187 122 19 chr17 20848405 20849717 -68654836 + Charlie1 DNA MER1_type 1 2755 -6 234 266 99 47 chr17 20849724 20849916 -68654637 + L1MC4a LINE L1 5901 6102 -1706 1839 152 3 37 chr17 20850370 20850693 -68653860 - AluJb SINE Alu 0 312 1 1288 276 58 15 chr17 20851673 20852083 -68652470 - LTR16B LTR ERVL 0 464 37 2363 98 0 0 chr17 20852807 20853104 -68651449 - AluSg SINE Alu -13 297 1 23 33 0 0 chr17 20853145 20853175 -68651378 + AT_rich Low_complexity Low_complexity 1 30 0 2102 142 0 10 chr17 20854669 20854971 -68649582 - AluSx SINE Alu -11 301 3 353 227 246 59 chr17 20854973 20855176 -68649377 - MIR SINE MIR 0 262 22 2188 150 211 19 chr17 20855177 20855604 -68648949 - LTR22 LTR ERVK 0 509 1 533 185 0 0 chr17 20856409 20856501 -68648052 - MLT1D LTR MaLR 0 505 414 225 0 0 0 chr17 20856611 20856636 -68647917 + (T)n Simple_repeat Simple_repeat 1 25 0 254 275 53 92 chr17 20856834 20856893 -68647660 + MER5A DNA MER1_type 63 123 -66 2095 79 0 11 chr17 20856893 20857160 -68647393 - AluY SINE Alu -18 293 30 254 275 53 92 chr17 20857160 20857231 -68647322 + MER5A DNA MER1_type 123 188 -1 3193 154 53 68 chr17 20857354 20857704 -68646849 - L1MCb LINE L1 -4836 1728 1374 318 79 0 0 chr17 20857704 20857742 -68646811 - tRNA-Lys-AAG tRNA tRNA -38 38 1 3193 154 53 68 chr17 20857742 20858393 -68646160 - L1MCb LINE L1 -5190 1374 724 1499 221 32 52 chr17 20858399 20858623 -68645930 - L1M4 LINE L1 -1093 6472 6260 2420 115 27 27 chr17 20858623 20858998 -68645555 + THE1C LTR MaLR 1 375 0 1499 221 32 52 chr17 20858998 20859213 -68645340 - L1M4 LINE L1 -1305 6260 6042 698 101 0 0 chr17 20859232 20859331 -68645222 - AluY SINE Alu 0 311 213 972 179 62 12 chr17 20859394 20859624 -68644929 - MSTD LTR MaLR 0 396 114 4917 160 51 30 chr17 20859624 20860115 -68644438 - L1M4 LINE L1 -2869 4696 4217 1693 143 46 55 chr17 20860115 20860284 -68644269 - AluSx SINE Alu -6 306 140 2083 137 0 0 chr17 20860284 20860577 -68643976 - AluSx SINE Alu -15 297 5 1693 143 46 55 chr17 20860577 20860714 -68643839 - AluSx SINE Alu -172 140 3 4917 160 51 30 chr17 20860714 20861553 -68643000 - L1M4 LINE L1 -3348 4217 3316 2215 115 0 0 chr17 20861553 20861849 -68642704 - AluSq SINE Alu -17 296 1 4917 160 51 30 chr17 20861849 20862037 -68642516 - L1M4 LINE L1 -4249 3316 3133 * 12803 146 109 16 chr17 20862023 20864324 -68640229 - L1M4 LINE L1 -5028 2537 21 251 285 0 73 chr17 20864337 20864474 -68640079 - L1MEc LINE L1 -4539 2599 2473 1282 167 21 103 chr17 20864532 20864697 -68639856 + AluSq SINE Alu 1 127 -176 2118 125 0 3 chr17 20864697 20865000 -68639553 + AluSc SINE Alu 1 302 -7 1282 167 21 103 chr17 20865000 20865164 -68639389 + AluSq SINE Alu 127 303 0 710 278 163 10 chr17 20865171 20865466 -68639087 + L1ME3A LINE L1 5557 5896 -274 310 198 74 66 chr17 20865620 20865741 -68638812 + MLT1H1 LTR MaLR 395 516 -74 186 43 0 0 chr17 20865743 20865766 -68638787 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 800 171 0 0 chr17 20865767 20865890 -68638663 - FLAM_C SINE Alu -20 123 1 26 30 0 0 chr17 20866005 20866038 -68638515 + AT_rich Low_complexity Low_complexity 1 33 0 1725 90 62 12 chr17 20866063 20866307 -68638246 - AluSp SINE Alu -6 307 52 1664 199 10 0 chr17 20866659 20866960 -68637593 - AluJb SINE Alu -8 304 1 263 198 81 12 chr17 20866966 20867052 -68637501 - L1MEc LINE L1 -4544 2415 2324 2008 214 96 45 chr17 20867288 20867956 -68636597 - L1MEc LINE L1 -4686 2273 1572 1397 113 0 5 chr17 20867968 20868163 -68636390 - AluSq SINE Alu -119 194 1 316 26 0 0 chr17 20868184 20868222 -68636331 + AluY SINE Alu 255 292 -8 890 256 39 32 chr17 20868224 20868439 -68636114 - L1MEc LINE L1 -5345 1514 1295 2329 123 0 0 chr17 20868439 20868749 -68635804 - AluSx SINE Alu -2 310 1 890 256 39 32 chr17 20868749 20868814 -68635739 - L1MEc LINE L1 -5564 1295 1232 1909 152 17 0 chr17 20869026 20869328 -68635225 + AluJb SINE Alu 1 307 -5 1056 192 39 32 chr17 20869330 20869441 -68635112 - L1 LINE L1 -2989 3393 3284 2075 134 7 13 chr17 20869441 20869746 -68634807 - AluSx SINE Alu -9 303 1 2098 130 0 7 chr17 20869748 20870047 -68634506 - AluSx SINE Alu -15 297 1 1056 192 39 32 chr17 20870047 20870213 -68634340 - L1 LINE L1 -3098 3284 3111 1191 153 129 69 chr17 20870214 20870546 -68634007 + THE1C LTR MaLR 1 339 -36 2074 128 3 0 chr17 20870546 20870844 -68633709 - AluSx SINE Alu -13 299 1 1191 153 129 69 chr17 20870844 20870884 -68633669 + THE1C LTR MaLR 339 375 0 254 132 29 29 chr17 20870886 20870954 -68633599 - L1 LINE L1 -3270 3112 3045 2407 191 105 47 chr17 20871013 20871088 -68633465 - L1 LINE L1 -3324 3058 2989 1528 197 7 27 chr17 20871088 20871387 -68633166 + AluJo SINE Alu 1 293 -19 2407 191 105 47 chr17 20871387 20871733 -68632820 - L1 LINE L1 -3393 2989 2665 2385 90 0 10 chr17 20871733 20872034 -68632519 - AluSg SINE Alu -12 298 1 1595 193 10 7 chr17 20872041 20872336 -68632217 - AluJb SINE Alu -16 296 1 2407 191 105 47 chr17 20872336 20872499 -68632054 - L1 LINE L1 -3722 2660 2508 1297 171 167 8 chr17 20872499 20872762 -68631791 - AluSx SINE Alu -7 305 1 2407 191 105 47 chr17 20872762 20873647 -68630906 - L1 LINE L1 -3874 2508 1393 2280 95 7 0 chr17 20873664 20873960 -68630593 - AluSp SINE Alu -15 298 1 277 331 74 51 chr17 20874166 20874341 -68630212 + MIR SINE MIR 4 182 -80 2514 53 0 7 chr17 20874614 20874916 -68629637 - AluY SINE Alu -11 300 1 35 63 0 0 chr17 20875173 20875236 -68629317 + AT_rich Low_complexity Low_complexity 1 63 0 2303 77 3 0 chr17 20875564 20875885 -68628668 - AluSp SINE Alu 0 322 1 1966 116 58 0 chr17 20875887 20876162 -68628391 - AluSx SINE Alu -21 291 1 228 303 75 30 chr17 20876625 20876788 -68627765 + MIR SINE MIR 20 184 -77 2062 101 50 7 chr17 20877115 20877412 -68627141 - AluSx SINE Alu -2 310 1 236 228 148 40 chr17 20877538 20877639 -68626914 + MIR SINE MIR 124 235 -27 205 321 168 10 chr17 20877820 20878016 -68626537 + MIR SINE MIR 36 262 0 802 204 0 39 chr17 20878368 20878549 -68626004 + AluJo SINE Alu 47 220 -92 250 118 0 39 chr17 20878549 20878600 -68625953 + FLAM_A SINE Alu 85 133 0 2196 123 0 0 chr17 20878604 20878913 -68625640 + AluY SINE Alu 1 309 -2 2048 142 0 19 chr17 20878922 20879238 -68625315 + AluSx SINE Alu 1 310 -2 1910 145 35 0 chr17 20879305 20879595 -68624958 + AluSx SINE Alu 1 300 -12 596 126 13 2 chr17 20879604 20879834 -68624719 + AluJ SINE Alu 1 287 -25 2286 93 0 0 chr17 20880276 20880565 -68623988 - AluSx SINE Alu -23 289 1 196 303 123 41 chr17 20880566 20880688 -68623865 - L2 LINE L2 0 3313 3182 817 211 0 0 chr17 20880931 20881087 -68623466 - MER3 DNA MER1_type -82 127 19 2512 70 0 0 chr17 20881243 20881544 -68623009 + AluSc SINE Alu 1 301 -8 608 317 94 57 chr17 20881901 20882504 -68622049 - L2 LINE L2 -941 2373 1723 2328 95 0 0 chr17 20882504 20882799 -68621754 + AluSg SINE Alu 14 308 -2 608 317 94 57 chr17 20882799 20883107 -68621446 - L2 LINE L2 -1591 1723 1428 224 300 138 0 chr17 20883144 20883224 -68621329 + MIR SINE MIR 54 144 -118 2372 54 0 4 chr17 20883250 20883529 -68621024 - AluY SINE Alu -13 298 21 241 69 0 0 chr17 20883529 20883558 -68620995 - AluY SINE Alu -259 42 14 195 273 18 0 chr17 20883577 20883632 -68620921 + MIR SINE MIR 204 259 -3 851 36 18 27 chr17 20885721 20885833 -68618720 - L1PA4 LINE L1 0 6155 6045 2244 82 3 70 chr17 20886010 20886341 -68618212 + AluSg SINE Alu 2 310 0 835 193 93 0 chr17 20886474 20886635 -68617918 + MER46A DNA MER2_type 1 176 -60 746 215 0 8 chr17 20886744 20886874 -68617679 + FLAM_C SINE Alu 2 130 -3 1448 173 135 4 chr17 20886879 20887145 -68617408 + AluJo SINE Alu 2 302 0 294 29 0 0 chr17 20887150 20887185 -68617368 + (TA)n Simple_repeat Simple_repeat 2 36 0 533 257 65 36 chr17 20887588 20887895 -68616658 - L1M4 LINE L1 -1449 4697 4382 446 204 124 9 chr17 20887898 20888011 -68616542 + L2 LINE L2 1874 1999 -1315 326 174 210 18 chr17 20888120 20888287 -68616266 - HAL1 LINE L1 -1314 1193 995 1083 263 93 55 chr17 20888303 20888755 -68615798 - HAL1 LINE L1 -1687 820 352 1981 196 18 25 chr17 20888831 20889224 -68615329 + MER47B DNA MER2_type 28 417 -1 279 317 49 7 chr17 20889224 20889366 -68615187 - L1MA9 LINE L1 -82 6230 6083 * 1125 233 52 0 chr17 20889364 20889634 -68614919 - HAL1 LINE L1 -2132 375 92 226 272 138 59 chr17 20889781 20889848 -68614705 - L1MC4a LINE L1 -1460 6348 6288 2350 107 0 7 chr17 20889848 20890157 -68614396 + AluSx SINE Alu 1 307 -5 226 272 138 59 chr17 20890157 20890343 -68614210 - L1MC4a LINE L1 -1520 6288 6075 224 301 0 32 chr17 20890396 20890489 -68614064 + L2 LINE L2 3065 3154 -159 868 142 8 0 chr17 20890490 20890617 -68613936 - FLAM_C SINE Alu -5 128 1 24 67 0 0 chr17 20891217 20891262 -68613291 + AT_rich Low_complexity Low_complexity 1 45 0 2376 97 3 0 chr17 20891332 20891640 -68612913 - AluY SINE Alu -2 309 1 1134 131 0 0 chr17 20891674 20891834 -68612719 - AluSg/x SINE Alu -19 293 134 2345 95 3 3 chr17 20891834 20892139 -68612414 - AluSx SINE Alu -7 305 1 5222 174 18 11 chr17 20892144 20893463 -68611090 - L1MB2 LINE L1 -3 6168 4839 1977 86 8 4 chr17 20893473 20893728 -68610825 - AluSq SINE Alu -20 293 38 307 244 35 23 chr17 20893728 20893814 -68610739 - MER119 DNA MER1_type -496 87 1 447 270 45 34 chr17 20895893 20896071 -68608482 - MLT1J LTR MaLR -331 180 1 253 169 28 28 chr17 20897084 20897155 -68607398 + (TA)n Simple_repeat Simple_repeat 2 72 0 311 284 57 11 chr17 20897243 20897331 -68607222 + HAL1 LINE L1 37 128 -2379 954 104 0 15 chr17 20897354 20897489 -68607064 - FLAM_C SINE Alu 0 133 1 422 329 61 26 chr17 20897778 20898006 -68606547 + L1MC4a LINE L1 5668 5903 -1905 4792 187 122 19 chr17 20898010 20899322 -68605231 + Charlie1 DNA MER1_type 1 2755 -6 307 305 131 34 chr17 20899329 20899565 -68604988 + L1MC4a LINE L1 5901 6159 -1649 1860 152 3 37 chr17 20899975 20900298 -68604255 - AluJb SINE Alu 0 312 1 1308 276 58 15 chr17 20901278 20901688 -68602865 - LTR16B LTR ERVL 0 464 37 2382 98 0 0 chr17 20902412 20902709 -68601844 - AluSg SINE Alu -13 297 1 23 33 0 0 chr17 20902750 20902780 -68601773 + AT_rich Low_complexity Low_complexity 1 30 0 2113 142 0 10 chr17 20904274 20904576 -68599977 - AluSx SINE Alu -11 301 3 319 186 127 85 chr17 20904663 20904781 -68599772 - MIR SINE MIR -118 144 22 2039 150 211 19 chr17 20904782 20905209 -68599344 - LTR22 LTR ERVK 0 509 1 529 185 0 0 chr17 20906014 20906106 -68598447 - MLT1D LTR MaLR 0 505 414 234 0 0 0 chr17 20906216 20906242 -68598311 + (T)n Simple_repeat Simple_repeat 1 26 0 215 282 53 92 chr17 20906440 20906499 -68598054 + MER5A DNA MER1_type 63 123 -66 2116 79 0 11 chr17 20906499 20906766 -68597787 - AluY SINE Alu -18 293 30 215 282 53 92 chr17 20906766 20906837 -68597716 + MER5A DNA MER1_type 123 188 -1 3153 154 53 68 chr17 20906960 20907310 -68597243 - L1MCb LINE L1 -4836 1728 1374 319 79 0 0 chr17 20907310 20907348 -68597205 - tRNA-Lys-AAG tRNA tRNA -38 38 1 3153 154 53 68 chr17 20907348 20907999 -68596554 - L1MCb LINE L1 -5190 1374 724 1473 221 32 52 chr17 20908005 20908229 -68596324 - L1M4 LINE L1 -1093 6472 6260 2275 115 27 27 chr17 20908229 20908604 -68595949 + THE1C LTR MaLR 1 375 0 1473 221 32 52 chr17 20908604 20908819 -68595734 - L1M4 LINE L1 -1305 6260 6042 667 101 0 0 chr17 20908838 20908937 -68595616 - AluY SINE Alu 0 311 213 967 180 62 12 chr17 20909000 20909230 -68595323 - MSTD LTR MaLR 0 396 114 4842 161 51 30 chr17 20909230 20909721 -68594832 - L1M4 LINE L1 -2869 4696 4217 1712 143 46 55 chr17 20909721 20909890 -68594663 - AluSx SINE Alu -6 306 140 2100 137 0 0 chr17 20909890 20910183 -68594370 - AluSx SINE Alu -15 297 5 1712 143 46 55 chr17 20910183 20910320 -68594233 - AluSx SINE Alu -172 140 3 4842 161 51 30 chr17 20910320 20911159 -68593394 - L1M4 LINE L1 -3348 4217 3316 2231 115 0 0 chr17 20911159 20911455 -68593098 - AluSq SINE Alu -17 296 1 4842 161 51 30 chr17 20911455 20911643 -68592910 - L1M4 LINE L1 -4249 3316 3133 * 12862 146 109 16 chr17 20911629 20913930 -68590623 - L1M4 LINE L1 -5028 2537 21 241 285 0 73 chr17 20913943 20914080 -68590473 - L1MEc LINE L1 -4539 2024 1898 953 163 6 6 chr17 20914139 20914299 -68590254 + FRAM SINE Alu 1 160 -16 2308 82 34 0 chr17 20914303 20914595 -68589958 + AluSc SINE Alu 1 302 -7 500 237 9 7 chr17 20914711 20914846 -68589707 - L1MEc LINE L1 -4594 1923 1656 2429 98 0 0 chr17 20914847 20915153 -68589400 - AluSx SINE Alu -1 311 6 286 270 29 27 chr17 20915715 20915897 -68588656 + MIR SINE MIR 75 253 -9 2107 120 7 17 chr17 20916073 20916373 -68588180 + AluSq SINE Alu 1 297 -16 26 0 0 0 chr17 20916377 20916403 -68588150 + AT_rich Low_complexity Low_complexity 1 26 0 2169 135 6 6 chr17 20916764 20917076 -68587477 + AluJb SINE Alu 1 312 0 25 0 0 0 chr17 20917334 20917359 -68587194 + AT_rich Low_complexity Low_complexity 1 25 0 2334 79 0 3 chr17 20918115 20918405 -68586148 - AluSg SINE Alu -7 303 15 2200 110 0 0 chr17 20918630 20918956 -68585597 - AluSx SINE Alu 0 326 1 1928 148 6 31 chr17 20920038 20920356 -68584197 + AluJb SINE Alu 1 310 -2 2297 114 7 0 chr17 20921391 20921698 -68582855 - AluSx SINE Alu -3 309 1 2277 122 0 3 chr17 20922029 20922340 -68582213 - AluSx SINE Alu -1 311 2 786 187 0 0 chr17 20922836 20922959 -68581594 + FLAM_A SINE Alu 1 123 -10 285 127 18 18 chr17 20923377 20923432 -68581121 + L2 LINE L2 3259 3313 0 284 252 193 8 chr17 20924065 20924184 -68580369 + MIR SINE MIR 8 148 -114 2056 129 0 0 chr17 20924185 20924464 -68580089 + AluSx SINE Alu 1 279 -33 480 170 0 0 chr17 20924470 20924576 -68579977 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 238 200 55 0 chr17 20924580 20924635 -68579918 + MIR SINE MIR 154 211 -51 25 0 0 0 chr17 20927028 20927053 -68577500 + AT_rich Low_complexity Low_complexity 1 25 0 189 283 43 33 chr17 20927140 20927232 -68577321 - MIR SINE MIR -115 147 55 1866 121 68 11 chr17 20928295 20928576 -68575977 - AluSg SINE Alu -13 297 1 2436 50 20 3 chr17 20928589 20928888 -68575665 - AluY SINE Alu -5 306 3 393 291 140 0 chr17 20929820 20929999 -68574554 + MIR SINE MIR 44 247 -15 228 254 189 41 chr17 20930285 20930407 -68574146 - MIR SINE MIR -64 198 59 1854 131 4 11 chr17 20931817 20932091 -68572462 - AluSx SINE Alu -19 293 22 1003 149 6 40 chr17 20932158 20932332 -68572221 - AluSg/x SINE Alu -14 296 129 225 0 0 0 chr17 20932332 20932357 -68572196 + (TG)n Simple_repeat Simple_repeat 2 26 0 2261 92 18 0 chr17 20932358 20932642 -68571911 - AluSx SINE Alu -23 289 1 213 363 30 0 chr17 20932909 20933044 -68571509 + MIR SINE MIR 86 224 -38 373 235 37 0 chr17 20933491 20933571 -68570982 - MER58B DNA MER1_type 0 341 259 501 211 9 26 chr17 20933571 20933685 -68570868 - Tigger7 DNA MER2_type 0 2587 2476 754 194 69 7 chr17 20933690 20933834 -68570719 - Tigger7 DNA MER2_type -321 229 77 2197 111 13 3 chr17 20933840 20934147 -68570406 - AluSx SINE Alu -2 310 1 334 276 122 30 chr17 20934248 20934423 -68570130 + MIR SINE MIR 65 254 -8 2393 106 0 0 chr17 20935519 20935822 -68568731 + AluSq SINE Alu 1 303 -10 498 239 62 34 chr17 20936269 20936445 -68568108 + L2 LINE L2 3119 3299 -14 2225 101 14 0 chr17 20936501 20936797 -68567756 - AluSq SINE Alu -13 300 1 553 219 0 0 chr17 20936843 20936957 -68567596 - MIR SINE MIR -130 132 19 2276 106 3 0 chr17 20937155 20937457 -68567096 - AluSx SINE Alu -9 303 1 901 213 167 62 chr17 20937663 20938147 -68566406 - MLT1H LTR MaLR 0 549 15 271 160 85 85 chr17 20938166 20938260 -68566293 - LTR67 LTR ERVL -30 527 434 264 304 99 56 chr17 20938331 20938492 -68566061 - LTR67 LTR ERVL -269 288 121 297 299 20 13 chr17 20938727 20938946 -68565607 + HERVL LTR ERVL 4032 4326 -1438 330 26 0 0 chr17 20939624 20939663 -68564890 + (GGA)n Simple_repeat Simple_repeat 2 40 0 2300 103 0 7 chr17 20939779 20940080 -68564473 - AluSx SINE Alu -13 299 1 3477 164 48 5 chr17 20940281 20940950 -68563603 + L1MB3 LINE L1 5485 6182 -1 742 102 0 9 chr17 20942193 20942301 -68562252 - AluSp SINE Alu -205 108 2 1317 110 62 73 chr17 20942306 20942529 -68562024 - L1MB3 LINE L1 -128 6055 5831 2249 124 3 0 chr17 20942529 20942835 -68561718 - AluSx SINE Alu -5 307 1 1272 176 126 8 chr17 20942842 20943104 -68561449 - AluJo SINE Alu -9 293 1 1317 110 62 73 chr17 20943104 20943144 -68561409 - L1MB3 LINE L1 -358 5825 5787 350 368 41 23 chr17 20944950 20945121 -68559432 + L1M4 LINE L1 2441 2614 -3532 861 211 66 9 chr17 20946600 20946813 -68557740 + MIR SINE MIR 38 262 0 2311 107 0 0 chr17 20946866 20947175 -68557378 + AluSg1 SINE Alu 1 309 0 446 293 234 32 chr17 20947177 20947554 -68556999 + L1M4 LINE L1 4942 5389 -757 1495 172 4 4 chr17 20948908 20949164 -68555389 - AluJo SINE Alu -56 256 1 911 165 16 6 chr17 20949164 20949346 -68555207 - L1MA4 LINE L1 -224 6076 5893 1143 129 43 69 chr17 20949397 20949574 -68554979 - AluJo SINE Alu 0 312 141 2367 79 3 10 chr17 20949574 20949879 -68554674 - AluSx SINE Alu -9 303 1 1143 129 43 69 chr17 20949879 20949933 -68554620 - AluJo SINE Alu -171 141 87 225 0 0 0 chr17 20950018 20950043 -68554510 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 666 324 108 27 chr17 20950169 20950769 -68553784 - L2 LINE L2 -65 3207 2560 1751 132 61 0 chr17 20950793 20951073 -68553480 + AluJb SINE Alu 16 312 0 183 248 74 83 chr17 20951175 20951296 -68553257 + L2 LINE L2 612 731 -2583 215 290 142 30 chr17 20952172 20952341 -68552212 - L2 LINE L2 0 3313 3126 206 331 69 23 chr17 20952358 20952488 -68552065 - L2 LINE L2 -429 2885 2750 388 277 41 82 chr17 20953608 20953803 -68550750 + MIR SINE MIR 2 188 -74 867 140 0 0 chr17 20954842 20954985 -68549568 + (CA)n Simple_repeat Simple_repeat 1 143 0 239 73 49 0 chr17 20955015 20955056 -68549497 + CT-rich Low_complexity Low_complexity 2 44 0 1864 91 0 30 chr17 20955224 20955487 -68549066 - AluSq SINE Alu -58 255 1 213 200 11 78 chr17 20956765 20956855 -68547698 + C-rich Low_complexity Low_complexity 4 87 0 2097 107 3 19 chr17 20957157 20957474 -68547079 - AluSx SINE Alu 0 312 1 245 294 261 5 chr17 20959645 20959863 -68544690 - L2 LINE L2 -48 3224 2951 281 229 49 49 chr17 20960598 20960624 -68543929 - L1ME4a LINE L1 -1 6120 6095 1760 157 0 47 chr17 20960624 20960942 -68543611 + AluJo SINE Alu 1 303 -9 281 229 49 49 chr17 20960942 20961037 -68543516 - L1ME4a LINE L1 -25 6096 5999 463 353 0 0 chr17 20962113 20962246 -68542307 + MIR SINE MIR 28 160 -102 339 234 144 9 chr17 20962770 20962881 -68541672 - MIR3 SINE MIR -31 177 52 1888 144 16 16 chr17 20964694 20965006 -68539547 + AluJo SINE Alu 1 312 0 203 337 102 44 chr17 20965007 20965351 -68539202 + L2 LINE L2 1700 2063 -1251 759 320 123 5 chr17 20965357 20965504 -68539049 + L2 LINE L2 2232 2360 -954 2235 107 0 0 chr17 20965504 20965803 -68538750 - AluSg SINE Alu -11 299 1 759 320 123 5 chr17 20965803 20966086 -68538467 + L2 LINE L2 2360 2713 -601 1464 172 97 30 chr17 20966092 20966125 -68538428 + MER67C LTR ERV1 5 34 -676 1766 171 3 20 chr17 20966125 20966430 -68538123 + AluJo SINE Alu 2 301 -11 1464 172 97 30 chr17 20966430 20966757 -68537796 + MER67C LTR ERV1 34 389 -321 1727 193 10 0 chr17 20966758 20967064 -68537489 + AluJb SINE Alu 1 309 -3 202 244 146 12 chr17 20967072 20967154 -68537399 + L2 LINE L2 2748 2840 -474 454 300 66 40 chr17 20967233 20967460 -68537093 + L2 LINE L2 3080 3312 -1 2025 142 0 13 chr17 20967550 20967860 -68536693 - AluSx SINE Alu -6 306 1 210 346 115 8 chr17 20967862 20967992 -68536561 + L3 LINE CR1 902 1045 -532 1767 148 38 0 chr17 20968187 20968478 -68536075 - AluJb SINE Alu -4 308 7 184 268 36 0 chr17 20968481 20968537 -68536016 - MIR SINE MIR -63 145 88 213 336 21 86 chr17 20968617 20968757 -68535796 + L3b LINE CR1 1177 1307 -276 1975 122 7 0 chr17 20969258 20969545 -68535008 + AluSx SINE Alu 24 312 0 183 265 118 0 chr17 20970740 20970808 -68533745 - MER5B DNA MER1_type -44 134 59 2286 113 0 0 chr17 20970827 20971137 -68533416 - AluSx SINE Alu -2 310 1 811 91 0 50 chr17 20971137 20971258 -68533295 - AluSq/x SINE Alu -177 135 21 579 87 0 29 chr17 20971294 20971397 -68533156 - MLT1A1 LTR MaLR -265 100 1 2185 99 3 0 chr17 20971935 20972229 -68532324 + AluSq SINE Alu 1 295 -18 2206 93 0 19 chr17 20972377 20972687 -68531866 - AluSg SINE Alu -6 304 1 311 346 148 0 chr17 20972852 20973014 -68531539 + MIR SINE MIR 77 262 0 310 250 0 0 chr17 20974348 20974416 -68530137 - MER117 DNA MER1_type -18 179 112 583 270 75 17 chr17 20974514 20974734 -68529819 + MIR SINE MIR 16 242 -20 237 180 0 0 chr17 20974866 20974916 -68529637 + CT-rich Low_complexity Low_complexity 3 52 0 335 314 111 34 chr17 20975105 20975217 -68529336 - MIR SINE MIR 0 262 160 3136 156 26 26 chr17 20975217 20975261 -68529292 - L1MB2 LINE L1 -3 6168 6125 2149 103 0 17 chr17 20975261 20975563 -68528990 + AluSx SINE Alu 1 297 -15 3136 156 26 26 chr17 20975563 20976083 -68528470 - L1MB2 LINE L1 -45 6126 5604 335 314 111 34 chr17 20976083 20976177 -68528376 - MIR SINE MIR -102 160 40 226 258 112 0 chr17 20977359 20977448 -68527105 + MLT1L LTR MaLR 41 139 -476 788 234 65 9 chr17 20977515 20977729 -68526824 + L1ME3A LINE L1 5945 6170 0 2847 6 0 0 chr17 20977737 20978051 -68526502 + AluYb8 SINE Alu 1 314 -4 303 93 0 0 chr17 20978122 20978165 -68526388 + (T)n Simple_repeat Simple_repeat 1 43 0 2407 145 10 64 chr17 20978555 20978595 -68525958 - L1MB8 LINE L1 -6 6172 6131 2329 52 0 45 chr17 20978595 20978903 -68525650 - AluY SINE Alu -17 294 1 2407 145 10 64 chr17 20978903 20979359 -68525194 - L1MB8 LINE L1 -47 6131 5703 2698 142 69 32 chr17 20979456 20979991 -68524562 - L1MC2 LINE L1 -1 6343 5789 256 286 13 0 chr17 20980210 20980287 -68524266 + GA-rich Low_complexity Low_complexity 2 79 0 204 173 58 0 chr17 20981084 20981136 -68523417 + GA-rich Low_complexity Low_complexity 2 56 0 294 278 117 43 chr17 20981140 20981302 -68523251 + MLT1H LTR MaLR 8 181 -374 197 262 33 0 chr17 20984533 20984594 -68519959 + MIR SINE MIR 42 104 -104 2197 89 3 3 chr17 20985583 20985896 -68518657 + AluSq SINE Alu 1 313 0 269 250 52 9 chr17 20985926 20986042 -68518511 - L1ME4a LINE L1 -35 6086 5966 2247 82 0 3 chr17 20988174 20988482 -68516071 - AluSc SINE Alu 0 307 1 29 0 0 0 chr17 20988487 20988516 -68516037 + AT_rich Low_complexity Low_complexity 1 29 0 334 292 165 34 chr17 20989072 20989195 -68515358 - L1ME4a LINE L1 -3 6118 6013 2247 86 3 3 chr17 20989195 20989485 -68515068 - AluSx SINE Alu -22 290 1 334 292 165 34 chr17 20989485 20989971 -68514582 - L1ME4a LINE L1 -108 6013 5415 2343 94 10 0 chr17 20989971 20990280 -68514273 - AluSx SINE Alu 0 312 1 334 292 165 34 chr17 20990280 20990323 -68514230 - L1ME4a LINE L1 -706 5415 5379 348 298 189 45 chr17 20990342 20990481 -68514072 - L1ME4a LINE L1 -815 5331 5213 2131 99 20 0 chr17 20990481 20990775 -68513778 + AluSp SINE Alu 1 300 -13 348 298 189 45 chr17 20990775 20990837 -68513716 - L1ME4a LINE L1 -933 5213 5161 2363 78 0 0 chr17 20990837 20991131 -68513422 + AluSq SINE Alu 1 294 -19 348 298 189 45 chr17 20991131 20991240 -68513313 - L1ME4a LINE L1 -985 5161 4975 630 240 52 82 chr17 20991884 20992151 -68512402 - MIR SINE MIR -2 260 2 342 296 160 0 chr17 20994140 20994265 -68510288 - MIR SINE MIR -27 235 91 283 307 80 7 chr17 20995412 20995549 -68509004 - MIR3 SINE MIR -60 148 2 2055 133 7 3 chr17 20995691 20995992 -68508561 + AluJb SINE Alu 1 302 -10 521 198 95 86 chr17 20996380 20996468 -68508085 + Charlie8 DNA MER1_type 62 148 -2269 2224 110 10 3 chr17 20996468 20996767 -68507786 + AluSg SINE Alu 1 301 -9 521 198 95 86 chr17 20996767 20996910 -68507643 + Charlie8 DNA MER1_type 148 295 -2122 782 179 49 22 chr17 20998023 20998207 -68506346 - MER5A DNA MER1_type 0 189 1 181 191 235 0 chr17 20999053 20999121 -68505432 + MIR SINE MIR 161 244 -18 1474 111 0 39 chr17 20999466 20999674 -68504879 - AluJo SINE Alu -15 297 98 599 168 0 0 chr17 20999796 20999891 -68504662 - AluJo SINE Alu -217 95 1 2445 92 0 7 chr17 21000401 21000706 -68503847 - AluSx SINE Alu -9 303 1 1990 139 7 13 chr17 21000808 21001110 -68503443 - AluJo SINE Alu -12 300 1 2171 213 75 9 chr17 21001323 21001872 -68502681 - L1ME1 LINE L1 -4 6162 5578 1580 151 0 76 chr17 21001911 21002215 -68502338 + AluJo SINE Alu 25 305 -7 1013 215 93 23 chr17 21002216 21002518 -68502035 - L1ME1 LINE L1 -1050 5096 4774 1213 171 21 1 chr17 21002519 21002815 -68501738 + MER2 DNA MER2_type 2 344 -1 414 158 61 0 chr17 21002815 21002897 -68501656 + L1MB2 LINE L1 6085 6171 0 1927 144 7 13 chr17 21002935 21003241 -68501312 + AluSx SINE Alu 1 304 -8 692 227 43 0 chr17 21003357 21003520 -68501033 - L1ME1 LINE L1 -1371 4775 4606 481 293 64 0 chr17 21003530 21003687 -68500866 - L1M4 LINE L1 -693 5481 5315 1504 204 0 32 chr17 21003695 21004008 -68500545 + AluJo SINE Alu 1 303 -9 308 172 234 0 chr17 21004062 21004126 -68500427 + MSTD LTR MaLR 1 79 -317 608 193 0 0 chr17 21004126 21004235 -68500318 - FLAM_C SINE Alu 0 143 35 2270 81 0 24 chr17 21004282 21004580 -68499973 - AluY SINE Alu -20 291 1 1474 189 26 8 chr17 21004580 21004845 -68499708 + MSTD LTR MaLR 127 396 0 1808 165 74 85 chr17 21004845 21005111 -68499442 - MLT1C LTR MaLR -12 455 188 2166 104 3 39 chr17 21005111 21005419 -68499134 - AluSc SINE Alu -12 297 1 1808 165 74 85 chr17 21005419 21005566 -68498987 - MLT1C LTR MaLR -279 188 45 2057 138 3 3 chr17 21005566 21005862 -68498691 + AluSq SINE Alu 1 296 -17 1808 165 74 85 chr17 21005862 21005907 -68498646 - MLT1C LTR MaLR -422 45 1 565 83 94 10 chr17 21005907 21006003 -68498550 - L1M4 LINE L1 -848 5298 5195 23 0 0 0 chr17 21006003 21006026 -68498527 + AT_rich Low_complexity Low_complexity 1 23 0 990 158 35 6 chr17 21006078 21006249 -68498304 - FRAM SINE Alu 0 40 1 1030 111 142 40 chr17 21006257 21006483 -68498070 - L1MA8 LINE L1 -26 6265 6017 * 6134 217 54 59 chr17 21006458 21006658 -68497895 - L1M4 LINE L1 -949 5197 4998 2390 88 0 0 chr17 21006658 21006954 -68497599 - AluSg SINE Alu -14 296 1 6134 217 54 59 chr17 21006954 21007778 -68496775 - L1M4 LINE L1 -1148 4998 4171 2025 116 14 0 chr17 21007778 21007952 -68496601 - AluSx SINE Alu -16 296 115 237 33 0 0 chr17 21007952 21007982 -68496571 + (TTA)n Simple_repeat Simple_repeat 1 30 0 2025 116 14 0 chr17 21007982 21008099 -68496454 - AluSx SINE Alu -197 115 1 6134 217 54 59 chr17 21008099 21008451 -68496102 - L1M4 LINE L1 -1975 4171 3819 2261 108 0 0 chr17 21008451 21008739 -68495814 - AluSc SINE Alu -21 288 1 6134 217 54 59 chr17 21008739 21009337 -68495216 - L1M4 LINE L1 -2327 3819 3229 2299 107 0 0 chr17 21009337 21009637 -68494916 - AluSg SINE Alu -5 305 6 6134 217 54 59 chr17 21009637 21009706 -68494847 - L1M4 LINE L1 -2917 3229 3161 * 11009 172 47 56 chr17 21009695 21010454 -68494099 - L1MA3 LINE L1 0 7724 6960 2335 74 3 17 chr17 21010454 21010753 -68493800 - AluSp SINE Alu -18 295 1 11009 172 47 56 chr17 21010753 21011868 -68492685 - L1MA3 LINE L1 -764 6960 5837 2097 160 0 0 chr17 21011868 21012175 -68492378 - AluJb SINE Alu -5 307 1 11009 172 47 56 chr17 21012175 21012383 -68492170 - L1MA3 LINE L1 -1887 5837 5629 1634 143 0 126 chr17 21012383 21012725 -68491828 + AluJo SINE Alu 1 299 -3 1377 139 162 34 chr17 21012733 21012999 -68491554 + AluSx SINE Alu 2 301 -1 11009 172 47 56 chr17 21012999 21013695 -68490858 - L1MA3 LINE L1 -2102 5622 4922 304 81 0 0 chr17 21013695 21013732 -68490821 - U2 snRNA snRNA -151 37 1 11009 172 47 56 chr17 21013732 21015316 -68489237 - L1MA3 LINE L1 -2802 4922 3326 2104 122 3 7 chr17 21015316 21015611 -68488942 - AluSq SINE Alu -19 294 1 11009 172 47 56 chr17 21015611 21015762 -68488791 - L1MA3 LINE L1 -4398 3326 3175 224 30 30 0 chr17 21015762 21015795 -68488758 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 4745 96 21 12 chr17 21015795 21016777 -68487776 - SVA Other Other -645 1363 1 11009 172 47 56 chr17 21016777 21016878 -68487675 - L1MA3 LINE L1 -4548 3176 3076 918 135 0 0 chr17 21016878 21017011 -68487542 - FLAM_C SINE Alu 0 133 1 11009 172 47 56 chr17 21017011 21017378 -68487175 - L1MA3 LINE L1 -4648 3076 3241 715 216 0 0 chr17 21017378 21017503 -68487050 + FLAM_A SINE Alu 1 125 -8 11009 172 47 56 chr17 21017503 21017609 -68486944 - L1MA3 LINE L1 -4482 3242 3137 225 326 11 11 chr17 21017588 21017680 -68486873 - L1M4 LINE L1 -5576 966 875 * 269 320 45 26 chr17 21017758 21017914 -68486639 - L1M4 LINE L1 -5668 874 716 904 108 36 92 chr17 21018208 21018403 -68486150 - MER20 DNA MER1_type 0 219 36 2071 151 134 50 chr17 21018835 21019224 -68485329 + MLT1D LTR MaLR 3 358 -147 324 0 0 0 chr17 21019224 21019260 -68485293 + (TG)n Simple_repeat Simple_repeat 1 36 0 1674 95 136 0 chr17 21019264 21019506 -68485047 - AluSx SINE Alu -37 275 1 2071 151 134 50 chr17 21019506 21019575 -68484978 + MLT1D LTR MaLR 360 505 0 207 317 81 12 chr17 21019711 21019872 -68484681 + MIR SINE MIR 71 242 -20 2419 65 0 0 chr17 21020351 21020641 -68483912 - AluY SINE Alu -4 307 18 2025 142 0 7 chr17 21021099 21021394 -68483159 - AluSx SINE Alu -19 293 1 264 341 15 7 chr17 21021875 21022010 -68482543 - MIR SINE MIR -114 148 13 1946 158 7 3 chr17 21024921 21025218 -68479335 - AluJb SINE Alu -14 298 1 262 298 0 53 chr17 21026952 21027066 -68477487 - MIR3 SINE MIR -23 185 78 2309 111 0 0 chr17 21027848 21028154 -68476399 - AluSx SINE Alu -6 306 1 398 20 20 0 chr17 21028192 21028243 -68476310 + (CAAAAA)n Simple_repeat Simple_repeat 1 52 0 2276 104 3 0 chr17 21028529 21028828 -68475725 - AluSg SINE Alu -10 300 1 814 201 169 0 chr17 21029339 21029528 -68475025 - MER58A DNA MER1_type 0 224 4 478 284 52 26 chr17 21030113 21030342 -68474211 - MIR SINE MIR -22 240 6 2548 63 0 3 chr17 21030729 21031029 -68473524 + AluSc SINE Alu 1 299 -10 934 124 0 15 chr17 21031081 21031218 -68473335 + FRAM SINE Alu 36 170 -6 340 245 58 19 chr17 21031228 21031383 -68473170 + L1ME4a LINE L1 4456 4616 -1530 222 356 0 0 chr17 21031557 21031630 -68472923 + MIR SINE MIR 15 87 -175 1997 151 10 26 chr17 21031650 21031962 -68472591 + AluJb SINE Alu 1 307 -5 206 238 0 0 chr17 21031978 21032020 -68472533 + MIR SINE MIR 217 258 -4 2155 125 0 19 chr17 21032263 21032575 -68471978 - AluSx SINE Alu -6 306 1 230 53 79 0 chr17 21032593 21032631 -68471922 + A-rich Low_complexity Low_complexity 3 43 0 1537 109 5 9 chr17 21032672 21032893 -68471660 - AluSg/x SINE Alu -4 306 87 343 132 0 0 chr17 21032894 21032947 -68471606 - Alu SINE Alu -247 53 1 2043 143 0 0 chr17 21033042 21033336 -68471217 + AluSx SINE Alu 1 294 -18 305 279 126 0 chr17 21033514 21033707 -68470846 + L1ME4a LINE L1 5383 5605 -516 2016 154 7 0 chr17 21033731 21034036 -68470517 + AluSx SINE Alu 1 307 -5 686 236 141 19 chr17 21034157 21034470 -68470083 + L1ME4a LINE L1 5614 5964 -157 25 0 0 0 chr17 21034608 21034633 -68469920 + AT_rich Low_complexity Low_complexity 1 25 0 342 133 117 0 chr17 21034633 21034693 -68469860 + L1MA9 LINE L1 6072 6138 -174 2237 103 0 3 chr17 21034757 21035095 -68469458 - AluSx SINE Alu 0 312 1 181 280 75 37 chr17 21035101 21035208 -68469345 - L2 LINE L2 -1311 2003 1893 342 223 121 15 chr17 21035336 21035542 -68469011 + L2 LINE L2 2434 2661 -653 347 0 23 0 chr17 21036170 21036213 -68468340 + (CA)n Simple_repeat Simple_repeat 2 45 0 1729 74 5 5 chr17 21038574 21038790 -68465763 - AluSp SINE Alu -20 293 78 300 247 12 37 chr17 21039354 21039435 -68465118 + MLT1L LTR MaLR 132 210 -405 309 279 47 76 chr17 21039580 21039752 -68464801 + MLT1L LTR MaLR 447 613 -2 601 243 29 0 chr17 21040805 21040941 -68463612 + MER58B DNA MER1_type 202 341 0 191 337 63 11 chr17 21041193 21041278 -68463275 - MER5A DNA MER1_type -1 188 99 190 262 0 0 chr17 21041278 21041320 -68463233 + MER5B DNA MER1_type 1 42 -136 1825 161 13 10 chr17 21041723 21042027 -68462526 - AluJb SINE Alu -7 305 1 1934 165 0 3 chr17 21042029 21042326 -68462227 - AluJo SINE Alu -8 304 9 2054 150 3 0 chr17 21042347 21042640 -68461913 - AluSx SINE Alu -18 294 1 2167 103 0 70 chr17 21042818 21043147 -68461406 - AluSx SINE Alu -6 306 1 554 212 29 36 chr17 21045654 21045791 -68458762 + MIR SINE MIR 1 136 -126 2464 205 23 25 chr17 21046718 21047322 -68457231 + pTR5 LTR ERV1 743 1345 -1093 4628 91 24 122 chr17 21047337 21048248 -68456305 + LTR12 LTR ERV1 5 826 0 2241 113 0 0 chr17 21048249 21048542 -68456011 + AluSx SINE Alu 5 297 -15 188 302 0 19 chr17 21050311 21050364 -68454189 + L2 LINE L2 3002 3053 -219 2444 87 0 0 chr17 21050835 21051145 -68453408 + AluY SINE Alu 1 310 -1 895 148 7 21 chr17 21051162 21051304 -68453249 + FRAM SINE Alu 20 159 -17 2293 101 3 16 chr17 21051377 21051693 -68452860 + AluSx SINE Alu 1 312 0 418 274 176 7 chr17 21051731 21051884 -68452669 + MER5A DNA MER1_type 11 189 0 508 128 0 23 chr17 21052000 21052086 -68452467 + HY4 scRNA scRNA 1 84 -9 415 275 56 13 chr17 21052091 21052270 -68452283 + L1M4 LINE L1 5197 5382 -801 538 268 76 40 chr17 21053558 21053860 -68450693 + L2 LINE L2 1935 2247 -1067 2522 103 98 14 chr17 21053919 21054338 -68450215 + MER4C LTR ERV1 12 465 0 2429 127 84 27 chr17 21054341 21055024 -68449529 + MER4C-int LTR ERV1 1 841 -5757 1989 130 3 23 chr17 21055064 21055372 -68449181 - AluJo SINE Alu -10 302 1 411 239 182 25 chr17 21055400 21055559 -68448994 + LTR50 LTR ERVL 18 201 -594 254 164 36 0 chr17 21055806 21055861 -68448692 + LTR33A LTR ERVL 459 515 -8 907 288 118 26 chr17 21055916 21056458 -68448095 + L2 LINE L2 2715 3300 -13 198 0 0 0 chr17 21056458 21056480 -68448073 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 2262 113 7 0 chr17 21057114 21057414 -68447139 - AluSg SINE Alu -8 302 1 259 139 0 0 chr17 21057739 21057782 -68446771 + MIR SINE MIR 211 253 -9 203 354 0 0 chr17 21058202 21058284 -68446269 + C-rich Low_complexity Low_complexity 6 87 0 180 138 0 0 chr17 21058574 21058603 -68445950 + MIR SINE MIR 224 252 -10 593 154 0 77 chr17 21060578 21060773 -68443780 + CT-rich Low_complexity Low_complexity 1 180 0 258 262 213 25 chr17 21062216 21062338 -68442215 + MIR SINE MIR 62 206 -56 22 0 0 0 chr17 21062338 21062360 -68442193 + AT_rich Low_complexity Low_complexity 1 22 0 1885 128 0 4 chr17 21063106 21063379 -68441174 + AluSq SINE Alu 42 313 0 5067 205 25 3 chr17 21063379 21064579 -68439974 + L1PB3 LINE L1 4163 5388 -758 2564 158 12 79 chr17 21064584 21064758 -68439795 + L1PB3 LINE L1 5611 5795 -359 2162 101 4 4 chr17 21064758 21065036 -68439517 + AluSg SINE Alu 1 278 -32 2564 158 12 79 chr17 21065036 21065442 -68439111 + L1PB3 LINE L1 5795 6152 -2 1199 102 0 0 chr17 21065452 21065599 -68438954 + AluSq/x SINE Alu 1 147 -165 187 320 203 36 chr17 21065856 21066162 -68438391 + L3 LINE CR1 243 599 -978 648 195 0 0 chr17 21066163 21066286 -68438267 + FLAM_A SINE Alu 4 126 -7 183 340 75 11 chr17 21066401 21066495 -68438058 + L3 LINE CR1 794 893 -684 192 356 0 0 chr17 21067164 21067223 -68437330 - L2 LINE L2 -9 3304 3246 193 203 47 16 chr17 21067312 21067376 -68437177 - L2 LINE L2 -1018 2296 2231 544 236 158 20 chr17 21067864 21068118 -68436435 + L2 LINE L2 3025 3313 0 38 0 0 0 chr17 21119102 21119140 -68385413 + AT_rich Low_complexity Low_complexity 1 38 0 785 150 65 39 chr17 21119147 21119300 -68385253 - FRAM SINE Alu -19 157 1 1841 110 4 0 chr17 21119539 21119785 -68384768 - AluSx SINE Alu -10 302 56 1842 161 17 3 chr17 21119998 21120290 -68384263 - AluSx SINE Alu -16 296 1 278 132 75 0 chr17 21121554 21121607 -68382946 + Alu SINE Alu 244 300 0 2163 83 0 38 chr17 21122178 21122491 -68382062 - AluSx SINE Alu -11 301 1 859 201 7 0 chr17 21122583 21122727 -68381826 + AluJo SINE Alu 4 148 -164 2349 32 0 76 chr17 21122829 21123144 -68381409 - AluY SINE Alu -20 291 1 1981 60 124 0 chr17 21123197 21123462 -68381091 - AluSq SINE Alu -10 303 6 1937 137 0 39 chr17 21123937 21124243 -68380310 - AluJb SINE Alu -12 300 7 183 129 0 0 chr17 21124325 21124356 -68380197 + (TC)n Simple_repeat Simple_repeat 1 31 0 238 222 0 0 chr17 21124464 21124518 -68380035 - L1MCa LINE L1 -3323 3103 3050 2105 117 50 0 chr17 21124526 21124824 -68379729 - AluSp SINE Alu 0 313 1 2326 97 3 0 chr17 21124872 21125170 -68379383 - AluSp SINE Alu -14 299 1 1273 255 102 20 chr17 21125177 21125484 -68379069 - L1MCa LINE L1 -3373 3053 2690 1678 126 42 27 chr17 21125484 21125746 -68378807 + AluJb SINE Alu 33 298 -14 1273 255 102 20 chr17 21125746 21125929 -68378624 - L1MCa LINE L1 -3736 2690 2523 266 0 29 0 chr17 21125933 21125967 -68378586 + (TTA)n Simple_repeat Simple_repeat 2 36 0 802 155 9 0 chr17 21125971 21126087 -68378466 - FLAM_C SINE Alu -25 118 2 1245 112 0 37 chr17 21126093 21126308 -68378245 - L1MCa LINE L1 -4175 2251 2045 1798 162 10 3 chr17 21126674 21126976 -68377577 + AluJb SINE Alu 1 304 -8 904 174 0 13 chr17 21126998 21127147 -68377406 + AluSq/x SINE Alu 1 147 -166 2363 93 0 10 chr17 21127254 21127566 -68376987 - AluSg SINE Alu -1 309 1 247 286 156 0 chr17 21127803 21127880 -68376673 + L2 LINE L2 3168 3256 -16 235 267 79 40 chr17 21128564 21128665 -68375888 + L3 LINE CR1 1080 1184 -393 24 0 0 0 chr17 21129473 21129497 -68375056 + AT_rich Low_complexity Low_complexity 1 24 0 3009 93 42 16 chr17 21130042 21130471 -68374082 + L1PB3 LINE L1 5713 6152 -2 1894 119 18 3 chr17 21130806 21131091 -68373462 - AluSp SINE Alu -22 291 3 1314 163 203 49 chr17 21131579 21131652 -68372901 + Tigger7 DNA MER2_type 1 61 -2426 2533 57 0 3 chr17 21131652 21131953 -68372600 - AluY SINE Alu -9 302 3 1314 163 203 49 chr17 21131953 21132185 -68372368 + Tigger7 DNA MER2_type 61 353 -2134 2225 106 3 0 chr17 21132322 21132615 -68371938 + AluSp SINE Alu 3 296 -17 2217 122 3 0 chr17 21132624 21132927 -68371626 + AluSx SINE Alu 1 304 -8 1125 92 0 13 chr17 21132935 21133088 -68371465 + AluJb SINE Alu 1 151 -161 745 115 0 0 chr17 21134553 21134649 -68369904 - AluSg SINE Alu -213 97 2 2236 157 21 25 chr17 21134650 21134900 -68369653 - L1MB5 LINE L1 -314 5860 5611 2390 72 0 3 chr17 21134900 21135193 -68369360 - AluY SINE Alu 0 311 20 2236 157 21 25 chr17 21135193 21135375 -68369178 - L1MB5 LINE L1 -563 5611 5430 1324 212 86 3 chr17 21135416 21135854 -68368699 + L1MCa LINE L1 1851 2381 -4045 2599 61 0 0 chr17 21135854 21136164 -68368389 + AluY SINE Alu 1 310 -1 1324 212 86 3 chr17 21136164 21136213 -68368340 + L1MCa LINE L1 2381 2424 -4002 5202 206 40 28 chr17 21136233 21137260 -68367293 + L1M3 LINE L1 3951 4964 -1204 1737 170 50 0 chr17 21137260 21137384 -68367169 + AluJb SINE Alu 3 119 -193 405 0 0 0 chr17 21137384 21137429 -68367124 + (CA)n Simple_repeat Simple_repeat 2 46 0 1737 170 50 0 chr17 21137429 21137586 -68366967 + AluJb SINE Alu 119 298 -14 5202 206 40 28 chr17 21137586 21137897 -68366656 + L1M3 LINE L1 4964 5270 -898 2397 96 0 0 chr17 21137897 21138199 -68366354 + AluSx SINE Alu 1 302 -10 5202 206 40 28 chr17 21138199 21138457 -68366096 + L1M3 LINE L1 5270 5582 -586 206 302 0 19 chr17 21139803 21139856 -68364697 + L2 LINE L2 3002 3053 -219 2382 87 0 0 chr17 21140327 21140637 -68363916 + AluY SINE Alu 1 310 -1 892 141 7 21 chr17 21140654 21140796 -68363757 + FRAM SINE Alu 20 159 -17 2247 101 3 16 chr17 21140869 21141185 -68363368 + AluSx SINE Alu 1 312 0 375 266 210 8 chr17 21141223 21141347 -68363206 + MER5A DNA MER1_type 11 159 -30 1665 136 51 118 chr17 21141458 21141580 -68362973 + L1MB4 LINE L1 5759 5888 -292 1789 171 0 14 chr17 21141580 21141872 -68362681 + AluJb SINE Alu 6 293 -19 1665 136 51 118 chr17 21141872 21142199 -68362354 + L1MB4 LINE L1 5888 6178 -2 2690 7 3 3 chr17 21142199 21142493 -68362060 + AluYb8 SINE Alu 19 312 -6 4330 207 66 16 chr17 21142528 21144128 -68360425 + L1MC/D LINE L1 4005 5677 -667 1364 117 33 58 chr17 21144162 21144421 -68360132 - L1MB4 LINE L1 -34 6146 5892 423 213 21 0 chr17 21144922 21145016 -68359537 + L1M4 LINE L1 5357 5452 -726 1446 201 33 27 chr17 21145016 21145315 -68359238 + AluSx SINE Alu 1 301 -11 1262 114 0 0 chr17 21145448 21145615 -68358938 + AluSq SINE Alu 132 298 -15 259 32 0 0 chr17 21145936 21145967 -68358586 + (TTTA)n Simple_repeat Simple_repeat 3 136 0 2307 75 0 0 chr17 21145967 21146248 -68358305 - AluY SINE Alu -1 311 1 2112 84 0 11 chr17 21147582 21147903 -68356650 + AluY SINE Alu 1 318 0 2364 49 10 33 chr17 21148521 21148827 -68355726 + AluY SINE Alu 1 299 -12 1333 93 0 0 chr17 21149398 21149580 -68354973 - AluY SINE Alu -11 300 119 1745 102 0 51 chr17 21149686 21149961 -68354592 + AluSg SINE Alu 42 302 -8 741 151 0 17 chr17 21150207 21150326 -68354227 - FLAM_C SINE Alu -16 117 1 392 286 195 43 chr17 21150909 21151325 -68353228 - L2 LINE L2 -10 3303 2825 706 309 86 52 chr17 21151997 21152379 -68352174 + L1M4 LINE L1 3375 3769 -2377 618 26 0 0 chr17 21152379 21152455 -68352098 + (TCTCCC)n Simple_repeat Simple_repeat 1 76 0 5247 65 22 47 chr17 21152455 21153898 -68350655 + SVA Other Other 57 868 -520 1218 153 51 5 chr17 21154129 21154345 -68350208 + AluJo SINE Alu 1 226 -86 946 153 0 23 chr17 21154476 21154653 -68349900 + FRAM SINE Alu 1 172 -4 2107 101 3 26 chr17 21155579 21155887 -68348666 + AluSp SINE Alu 1 301 -12 1798 154 20 3 chr17 21155982 21156287 -68348266 + AluJo SINE Alu 3 312 0 225 244 0 128 chr17 21156364 21156450 -68348103 + LTR48 LTR ERV1 11 85 -702 867 220 63 29 chr17 21156509 21156860 -68347693 + LTR48B LTR ERV1 259 644 0 1846 171 0 3 chr17 21156927 21157226 -68347327 + AluJo SINE Alu 1 298 -14 346 248 26 59 chr17 21157237 21157390 -68347163 + HAL1 LINE L1 1428 1575 -932 804 190 0 0 chr17 21157393 21157530 -68347023 + AluJb SINE Alu 137 273 -39 198 0 0 0 chr17 21157545 21157567 -68346986 + (GGGA)n Simple_repeat Simple_repeat 4 25 0 1850 100 18 36 chr17 21157692 21157973 -68346580 + AluSx SINE Alu 1 276 -36 190 218 73 18 chr17 21157977 21158032 -68346521 - MIR SINE MIR -84 178 121 902 127 35 0 chr17 21158274 21158416 -68346137 - FRAM SINE Alu -19 157 11 2461 201 40 6 chr17 21159644 21160175 -68344378 + MER89 LTR ERV1 11 559 0 826 213 6 0 chr17 21160299 21160468 -68344085 - FRAM SINE Alu -6 170 1 214 224 30 45 chr17 21160728 21160795 -68343758 - MER5A DNA MER1_type -86 103 38 1651 137 18 0 chr17 21161053 21161330 -68343223 - AluSx SINE Alu -20 292 11 396 108 0 0 chr17 21161446 21161511 -68343042 + L1MA7 LINE L1 6223 6287 -4 323 163 71 20 chr17 21161527 21161625 -68342928 + Charlie5 DNA MER1_type 2428 2530 -82 22 0 0 0 chr17 21161779 21161801 -68342752 + AT_rich Low_complexity Low_complexity 1 22 0 2141 93 10 0 chr17 21163321 21163610 -68340943 + AluSx SINE Alu 1 292 -20 815 187 13 7 chr17 21163756 21163911 -68340642 - Tigger7 DNA MER2_type -10 2577 2422 423 0 0 0 chr17 21166618 21166665 -68337888 + (TG)n Simple_repeat Simple_repeat 2 48 0 208 50 0 50 chr17 21166719 21166759 -68337794 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 345 313 92 36 chr17 21166822 21167071 -68337482 + L2 LINE L2 2431 2693 -621 436 317 49 31 chr17 21167223 21167335 -68337218 + L2 LINE L2 2990 3099 -214 2091 116 7 0 chr17 21167335 21167637 -68336916 - AluSq SINE Alu -9 304 1 436 317 49 31 chr17 21167637 21167748 -68336805 + L2 LINE L2 3099 3217 -96 645 312 64 9 chr17 21167806 21168024 -68336529 - MIR SINE MIR -30 232 3 1867 125 0 11 chr17 21168493 21168773 -68335780 + AluJb SINE Alu 1 277 -35 2077 135 0 0 chr17 21169105 21169417 -68335136 + AluSx SINE Alu 1 312 0 2754 3 0 0 chr17 21170254 21170558 -68333995 - AluY SINE Alu -7 304 1 453 178 70 74 chr17 21170607 21170753 -68333800 + L1 LINE L1 5111 5274 -872 404 57 19 0 chr17 21170853 21170906 -68333647 - Alu SINE Alu -249 54 1 1399 183 5 46 chr17 21170906 21171273 -68333280 + L1M4 LINE L1 2866 3217 -2929 4046 172 23 63 chr17 21171604 21172604 -68331949 - LTR5 LTR ERVK -9 960 1 1425 151 0 4 chr17 21172963 21173195 -68331358 + AluJb SINE Alu 66 296 -16 458 148 20 40 chr17 21173200 21173271 -68331282 + AluS SINE Alu 2 73 -240 1360 161 119 75 chr17 21173271 21173700 -68330853 + LTR7 LTR ERV1 1 448 -2 1639 86 5 0 chr17 21173704 21173915 -68330638 + AluSp SINE Alu 70 284 -29 225 0 0 0 chr17 21173915 21173940 -68330613 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 458 148 20 40 chr17 21173950 21173974 -68330579 + AluS SINE Alu 76 100 -213 435 341 58 5 chr17 21174353 21174558 -68329995 - MIR SINE MIR -15 247 32 360 217 217 0 chr17 21174888 21175026 -68329527 - MER5A DNA MER1_type -18 171 4 317 234 191 14 chr17 21175041 21175182 -68329371 - MIR3 SINE MIR -10 198 33 535 128 0 23 chr17 21175680 21175766 -68328787 + HY4 scRNA scRNA 1 84 -9 440 256 67 18 chr17 21175772 21175955 -68328598 + L1M4 LINE L1 5188 5382 -801 579 268 76 40 chr17 21177243 21177545 -68327008 + L2 LINE L2 1935 2247 -1067 2653 103 98 14 chr17 21177604 21178023 -68326530 + MER4C LTR ERV1 12 465 0 2556 119 86 24 chr17 21178026 21178713 -68325840 + MER4C-int LTR ERV1 1 846 -5752 1848 134 3 16 chr17 21178750 21179055 -68325498 - AluJo SINE Alu -11 301 1 432 239 182 25 chr17 21179083 21179242 -68325311 + LTR50 LTR ERVL 18 201 -594 268 164 36 0 chr17 21179489 21179544 -68325009 + LTR33A LTR ERVL 459 515 -8 1018 288 118 26 chr17 21179599 21180141 -68324412 + L2 LINE L2 2715 3300 -13 198 0 0 0 chr17 21180141 21180163 -68324390 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 2118 110 7 0 chr17 21180797 21181097 -68323456 - AluSg SINE Alu -8 302 1 449 291 110 50 chr17 21181770 21182107 -68322446 + L1M4c LINE L1 41 397 -5987 247 186 0 0 chr17 21182164 21182207 -68322346 + L1M4c LINE L1 554 596 -5684 674 232 39 24 chr17 21182218 21182425 -68322128 + L1M4c LINE L1 664 873 -5407 * 6325 199 53 52 chr17 21182399 21182442 -68322111 + L1M4 LINE L1 64 105 -6437 1610 171 0 33 chr17 21182442 21182741 -68321812 + AluJo SINE Alu 1 289 -23 6325 199 53 52 chr17 21182741 21183385 -68321168 + L1M4 LINE L1 105 747 -5795 2162 109 0 3 chr17 21183385 21183689 -68320864 + AluSx SINE Alu 1 303 -9 6325 199 53 52 chr17 21183689 21184109 -68320444 + L1M4 LINE L1 747 1165 -5377 1654 137 10 83 chr17 21184109 21184423 -68320130 - AluJo SINE Alu -21 291 1 6325 199 53 52 chr17 21184423 21184920 -68319633 + L1M4 LINE L1 1165 1672 -4870 726 313 156 30 chr17 21184920 21185617 -68318936 - L2 LINE L2 -1924 1390 606 703 315 250 18 chr17 21185618 21186326 -68318227 + L3 LINE CR1 664 1535 -42 3652 243 67 25 chr17 21186340 21187280 -68317273 - L1MEc LINE L1 -5041 1355 354 2203 101 3 0 chr17 21187280 21187576 -68316977 - AluSx SINE Alu -15 297 1 3652 243 67 25 chr17 21187576 21187812 -68316741 - L1MEc LINE L1 -6042 354 129 1212 171 63 0 chr17 21187812 21188034 -68316519 - AluJo SINE Alu -17 295 60 337 242 40 40 chr17 21188058 21188157 -68316396 + L1MC4 LINE L1 6604 6702 -1340 * 340 173 108 12 chr17 21188078 21188187 -68316366 - L1MC4 LINE L1 -1339 6983 1983 306 149 135 14 chr17 21188218 21188292 -68316261 - L1MC4 LINE L1 -4361 2065 1983 365 185 0 0 chr17 21188322 21188387 -68316166 - L1MEc LINE L1 -6278 118 54 1603 95 0 5 chr17 21188494 21188704 -68315849 + AluSx SINE Alu 1 209 -103 286 333 78 0 chr17 21189115 21189205 -68315348 + MIR3 SINE MIR 10 106 -102 250 197 82 49 chr17 21189424 21189485 -68315068 + MIR SINE MIR 175 237 -25 2072 110 3 22 chr17 21189941 21190259 -68314294 + AluSx SINE Alu 1 312 0 1288 246 113 75 chr17 21191006 21192020 -68312533 + HAL1 LINE L1 818 1870 -637 1231 322 0 81 chr17 21192047 21192370 -68312183 - AluSx SINE Alu -15 297 1 2309 197 71 27 chr17 21192490 21192805 -68311748 + L1M4 LINE L1 4107 4407 -1739 2051 80 0 0 chr17 21192805 21193099 -68311454 + AluY SINE Alu 36 311 0 2309 197 71 27 chr17 21193099 21193373 -68311180 + L1M4 LINE L1 4407 4722 -1424 283 292 109 7 chr17 21193377 21193514 -68311039 + L1MEc LINE L1 1524 1674 -4722 23 0 0 0 chr17 21193619 21193642 -68310911 + AT_rich Low_complexity Low_complexity 1 23 0 2256 52 0 17 chr17 21193848 21194164 -68310389 - AluY SINE Alu 0 311 1 2468 40 0 0 chr17 21194257 21194553 -68310000 - AluY SINE Alu -15 296 1 397 290 70 65 chr17 21194798 21195012 -68309541 - L1ME4a LINE L1 -228 5893 5679 469 233 165 46 chr17 21195046 21195335 -68309218 - L1ME4a LINE L1 -770 5376 5165 1970 78 67 7 chr17 21195446 21195728 -68308825 - AluSc SINE Alu -10 299 1 600 246 73 45 chr17 21196107 21196327 -68308226 - MIR SINE MIR -23 239 14 2311 87 0 7 chr17 21196839 21197125 -68307428 + AluSx SINE Alu 1 308 0 196 42 0 0 chr17 21197125 21197149 -68307404 + (CAA)n Simple_repeat Simple_repeat 2 180 0 649 143 10 38 chr17 21197150 21197298 -68307255 + L1M LINE L1 5274 5420 -758 180 304 58 14 chr17 21198189 21198258 -68306295 + L2 LINE L2 3193 3264 -8 2535 72 0 0 chr17 21199774 21200078 -68304475 - AluY SINE Alu -7 304 1 990 166 0 18 chr17 21200436 21200599 -68303954 - FRAM SINE Alu -16 160 1 2388 80 0 7 chr17 21201115 21201448 -68303105 - AluSq SINE Alu 0 331 1 2295 108 0 9 chr17 21202543 21202858 -68301695 - AluSx SINE Alu 0 312 1 619 152 0 0 chr17 21202907 21203012 -68301541 + FLAM_A SINE Alu 21 125 -17 1632 168 47 26 chr17 21203028 21203367 -68301186 - MER47A DNA MER2_type -1 365 20 2265 119 3 0 chr17 21203853 21204155 -68300398 + AluSx SINE Alu 1 303 -9 404 278 247 0 chr17 21204220 21204414 -68300139 - MIR SINE MIR 0 262 21 2085 137 7 0 chr17 21204893 21205185 -68299368 + AluSx SINE Alu 1 294 -18 706 191 34 0 chr17 21205196 21205343 -68299210 + L1MA5A LINE L1 5991 6142 -155 1423 141 0 75 chr17 21205349 21205409 -68299144 + AluJo SINE Alu 87 150 -162 2239 99 39 0 chr17 21205409 21205692 -68298861 + AluSx SINE Alu 1 294 -18 1423 141 0 75 chr17 21205692 21205872 -68298681 + AluJo SINE Alu 150 309 -3 263 79 0 0 chr17 21205872 21205910 -68298643 + L1MA5A LINE L1 6144 6181 -116 1030 78 8 0 chr17 21206501 21206629 -68297924 - AluSq SINE Alu -84 229 101 1658 127 0 28 chr17 21206822 21207074 -68297479 + AluSg/x SINE Alu 68 312 0 2369 95 0 13 chr17 21209162 21209478 -68295075 - AluSx SINE Alu 0 312 1 2106 104 3 3 chr17 21209485 21209774 -68294779 - AluJo SINE Alu -21 291 3 232 248 0 48 chr17 21210190 21210315 -68294238 + G-rich Low_complexity Low_complexity 5 123 0 2182 120 3 10 chr17 21211176 21211475 -68293078 - AluSx SINE Alu -15 297 1 2660 53 0 0 chr17 21212093 21212394 -68292159 - AluY SINE Alu -10 301 1 2182 110 0 17 chr17 21212480 21212781 -68291772 - AluSx SINE Alu -16 296 1 2153 96 57 0 chr17 21212848 21213128 -68291425 - AluSx SINE Alu -1 311 16 453 131 24 12 chr17 21213128 21213212 -68291341 - LTR65 LTR ERV1 -421 248 164 1037 141 0 76 chr17 21213888 21213923 -68290630 - AluJo/FRAM SINE Alu -6 306 270 2355 107 0 3 chr17 21213923 21214232 -68290321 + AluSx SINE Alu 1 308 -4 1037 141 0 76 chr17 21214232 21214380 -68290173 - AluJo/FRAM SINE Alu -42 270 137 928 261 36 16 chr17 21214463 21214712 -68289841 + MIR SINE MIR 9 262 0 1674 168 13 69 chr17 21214911 21215012 -68289541 + L1MC4 LINE L1 7281 7386 -656 1596 176 79 3 chr17 21215012 21215302 -68289251 + AluJo SINE Alu 1 312 0 1674 168 13 69 chr17 21215302 21215576 -68288977 + L1MC4 LINE L1 7386 7635 -407 191 247 26 78 chr17 21216071 21216148 -68288405 - MIR SINE MIR -108 154 82 254 263 72 50 chr17 21216194 21216456 -68288097 + L1ME LINE L1 5632 5899 -222 755 196 98 5 chr17 21216764 21216897 -68287656 - L1MB2 LINE L1 -339 5832 5676 2364 94 7 0 chr17 21216897 21217196 -68287357 + AluSq SINE Alu 1 301 -12 755 196 98 5 chr17 21217196 21217246 -68287307 - L1MB2 LINE L1 -495 5676 5632 2209 227 61 37 chr17 21219092 21219743 -68284810 + LTR65 LTR ERV1 3 669 0 2444 92 13 0 chr17 21219914 21220219 -68284334 + AluSx SINE Alu 1 309 -3 844 142 0 24 chr17 21221410 21221537 -68283016 + AluJo SINE Alu 1 124 -188 1535 171 111 14 chr17 21222749 21223099 -68281454 + MLT1B LTR MaLR 7 390 0 1811 184 3 0 chr17 21223138 21223431 -68281122 + AluJb SINE Alu 1 294 -18 1294 163 10 0 chr17 21223432 21223641 -68280912 + AluJo SINE Alu 100 310 -2 2091 126 10 0 chr17 21224259 21224552 -68280001 + AluSg SINE Alu 1 296 -14 728 175 129 29 chr17 21224644 21224815 -68279738 - MER20 DNA MER1_type 0 219 32 655 203 11 39 chr17 21224867 21224966 -68279587 + MER5B DNA MER1_type 1 94 -84 2001 121 48 3 chr17 21224966 21225256 -68279297 + AluSx SINE Alu 1 303 -9 655 203 11 39 chr17 21225256 21225338 -68279215 + MER5B DNA MER1_type 94 177 -1 1362 102 0 0 chr17 21225860 21226036 -68278517 + AluSg/x SINE Alu 134 309 -3 200 281 124 50 chr17 21226095 21226216 -68278337 + MER5B DNA MER1_type 4 133 -45 665 96 0 0 chr17 21226309 21226403 -68278150 + AluY SINE Alu 207 300 -11 1832 168 28 0 chr17 21226407 21226693 -68277860 + AluJo SINE Alu 1 294 -18 511 261 30 42 chr17 21226721 21226886 -68277667 - MER63 DNA MER1_type -273 789 1 361 164 14 14 chr17 21226886 21226959 -68277594 + MER5A DNA MER1_type 115 187 -2 1947 148 42 42 chr17 21227096 21227141 -68277412 + LTR26B LTR ERV1 154 198 -333 1858 174 7 3 chr17 21227141 21227434 -68277119 + AluJb SINE Alu 1 294 -18 2344 92 3 0 chr17 21227439 21227731 -68276822 + AluSg SINE Alu 1 293 -17 1947 148 42 42 chr17 21227731 21228057 -68276496 + LTR26B LTR ERV1 201 531 0 2050 124 37 3 chr17 21228689 21228987 -68275566 + AluSg SINE Alu 2 309 -1 2450 97 0 0 chr17 21229522 21229830 -68274723 + AluSx SINE Alu 1 308 -4 2182 120 0 0 chr17 21229840 21230162 -68274391 + AluSx SINE Alu 1 322 0 376 236 22 0 chr17 21230170 21230259 -68274294 + MLT1D LTR MaLR 1 91 -414 634 202 16 0 chr17 21230269 21230398 -68274155 + MLT1D LTR MaLR 375 505 0 2433 88 0 0 chr17 21230792 21231086 -68273467 - AluSg SINE Alu -16 294 1 273 29 0 0 chr17 21232053 21232087 -68272466 + (TG)n Simple_repeat Simple_repeat 2 35 0 2266 102 0 7 chr17 21233146 21233440 -68271113 + AluSx SINE Alu 1 292 -20 1451 149 112 22 chr17 21233722 21233991 -68270562 + AluJo SINE Alu 1 293 -19 234 284 23 11 chr17 21234185 21234273 -68270280 - MIR3 SINE MIR -27 181 93 1723 244 47 2 chr17 21234406 21234808 -68269745 + Tigger5 DNA MER2_type 20 439 -1884 263 119 269 15 chr17 21234815 21234882 -68269671 + Tigger5 DNA MER2_type 2240 2323 0 347 60 20 0 chr17 21236650 21236700 -68267853 + (TTA)n Simple_repeat Simple_repeat 1 51 0 1342 136 148 4 chr17 21236711 21236988 -68267565 + AluJo SINE Alu 1 313 0 268 216 26 121 chr17 21237003 21237119 -68267434 - MIR SINE MIR -79 183 79 2070 66 0 52 chr17 21237201 21237472 -68267081 - AluSc SINE Alu -52 257 1 2313 118 0 0 chr17 21237480 21237784 -68266769 - AluSx SINE Alu -8 304 1 34 55 0 0 chr17 21239114 21239169 -68265384 + GC_rich Low_complexity Low_complexity 1 55 0 180 239 22 0 chr17 21239704 21239750 -68264803 + MIR SINE MIR 94 140 -68 2318 68 34 0 chr17 21240005 21240301 -68264252 + AluSc SINE Alu 1 306 -3 531 338 66 33 chr17 21240784 21240912 -68263641 + L1M4 LINE L1 4099 4221 -1925 875 118 0 8 chr17 21240912 21241039 -68263514 + FLAM_C SINE Alu 1 126 -7 531 338 66 33 chr17 21241039 21241212 -68263341 + L1M4 LINE L1 4221 4410 -1736 408 173 0 0 chr17 21241227 21241298 -68263255 + L1MC3 LINE L1 7121 7406 -589 941 193 0 0 chr17 21241515 21241681 -68262872 + FRAM SINE Alu 1 40 0 199 182 23 0 chr17 21241813 21241857 -68262696 - L2 LINE L2 -1996 1318 1274 508 286 31 90 chr17 21241909 21241968 -68262585 - L1M4 LINE L1 -2173 3973 3912 1814 146 0 67 chr17 21241968 21242148 -68262405 - AluJb SINE Alu -13 299 147 2166 109 26 26 chr17 21242148 21242460 -68262093 - AluSp SINE Alu -1 312 1 1814 146 0 67 chr17 21242460 21242595 -68261958 - AluJb SINE Alu -165 147 5 508 286 31 90 chr17 21242595 21242790 -68261763 - L1M4 LINE L1 -2234 3912 3734 948 128 0 7 chr17 21242790 21242931 -68261622 - FLAM_C SINE Alu -3 140 1 25 31 0 0 chr17 21243042 21243074 -68261479 + AT_rich Low_complexity Low_complexity 1 32 0 1990 190 103 5 chr17 21243168 21243615 -68260938 - MLT1D LTR MaLR -14 491 1 2410 77 0 32 chr17 21243823 21244134 -68260419 - AluSx SINE Alu -11 301 1 2271 108 17 0 chr17 21244144 21244440 -68260113 - AluSx SINE Alu -11 301 1 2336 99 17 0 chr17 21244449 21244751 -68259802 - AluSg SINE Alu -3 307 1 260 289 0 44 chr17 21244822 21244912 -68259641 + MLT1L LTR MaLR 143 228 -387 238 167 0 0 chr17 21244914 21244959 -68259594 - Alu SINE Alu -171 131 87 1897 137 10 7 chr17 21245087 21245379 -68259174 - AluJb SINE Alu -17 295 3 1851 130 3 29 chr17 21345863 21346171 -68158382 - AluY SINE Alu -11 300 1 335 312 39 13 chr17 21346529 21346683 -68157870 - L2 LINE L2 -215 3057 2900 259 254 176 28 chr17 21347021 21347163 -68157390 + MER5A DNA MER1_type 21 183 -6 192 300 122 33 chr17 21347761 21347851 -68156702 - L2 LINE L2 -1 3271 3174 1110 227 8 12 chr17 21348039 21348286 -68156267 + AluJo SINE Alu 45 290 -22 199 208 0 75 chr17 21348354 21348407 -68156146 - MER5B DNA MER1_type -129 49 1 437 33 0 17 chr17 21348434 21348494 -68156059 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 2213 105 3 3 chr17 21349357 21349651 -68154902 - AluSx SINE Alu -4 308 15 270 106 64 0 chr17 21349692 21349739 -68154814 + CT-rich Low_complexity Low_complexity 5 54 0 1846 162 13 7 chr17 21349765 21350068 -68154485 - AluSx SINE Alu 0 312 8 1824 135 69 3 chr17 21350229 21350518 -68154035 + AluJb SINE Alu 1 308 -4 181 188 0 0 chr17 21351665 21351697 -68152856 - L2 LINE L2 -1 3312 3281 650 88 15 118 chr17 21351974 21352110 -68152443 - L1MB7 LINE L1 -34 6150 6029 1651 153 76 109 chr17 21352112 21352519 -68152034 - MER4B LTR ERV1 0 872 453 198 71 0 0 chr17 21352519 21352547 -68152006 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 1612 95 36 98 chr17 21352551 21352856 -68151697 - AluSx SINE Alu -26 286 1 1651 153 76 109 chr17 21352856 21353109 -68151444 - MER4B LTR ERV1 -422 450 1 2929 140 84 54 chr17 21353109 21353597 -68150956 - L1MB7 LINE L1 -161 6023 5551 1894 137 58 0 chr17 21353597 21353875 -68150678 - AluSx SINE Alu -18 294 1 2929 140 84 54 chr17 21353875 21354045 -68150508 - L1MB7 LINE L1 -633 5551 5338 1758 197 7 0 chr17 21354045 21354335 -68150218 - AluSx SINE Alu -12 300 9 2929 140 84 54 chr17 21354335 21354411 -68150142 - L1MB7 LINE L1 -846 5338 5266 1118 215 73 15 chr17 21354549 21354849 -68149704 + L1MB5 LINE L1 5825 6132 -51 1635 167 3 38 chr17 21354849 21355142 -68149411 + AluJb SINE Alu 1 283 -29 1118 215 73 15 chr17 21355142 21355197 -68149356 + L1MB5 LINE L1 6132 6182 -1 328 190 150 10 chr17 21355268 21355368 -68149185 + L1MC5 LINE L1 7691 7804 -157 1785 171 6 19 chr17 21355709 21356071 -68148482 + MER46B DNA MER2_type 5 236 0 1398 204 0 0 chr17 21356120 21356370 -68148183 + AluSx SINE Alu 3 252 -60 228 282 42 14 chr17 21356628 21356699 -68147854 + L2 LINE L2 3194 3266 -6 443 324 29 0 chr17 21357171 21357344 -68147209 - Charlie8 DNA MER1_type -2160 257 80 1593 194 74 62 chr17 21357353 21357459 -68147094 + MLT1D LTR MaLR 13 116 -389 2152 103 0 13 chr17 21357459 21357760 -68146793 + AluSx SINE Alu 1 297 -15 1593 194 74 62 chr17 21357760 21358138 -68146415 + MLT1D LTR MaLR 116 503 -2 182 262 0 0 chr17 21358249 21358291 -68146262 + L2 LINE L2 3199 3240 -32 309 301 81 7 chr17 21358859 21358995 -68145558 + L2 LINE L2 2917 3062 -210 249 109 0 0 chr17 21359499 21359545 -68145008 + (TTAA)n Simple_repeat Simple_repeat 3 48 0 189 226 0 75 chr17 21359572 21359625 -68144928 + MER5B DNA MER1_type 1 49 -129 21 0 0 0 chr17 21359625 21359646 -68144907 + AT_rich Low_complexity Low_complexity 1 21 0 1627 181 7 11 chr17 21359693 21359974 -68144579 - AluJo SINE Alu -22 290 11 2551 71 0 3 chr17 21359991 21360299 -68144254 - AluY SINE Alu -4 307 1 233 268 0 152 chr17 21360307 21360368 -68144185 - MER5B DNA MER1_type -83 95 57 750 187 0 8 chr17 21360368 21360502 -68144051 + FLAM_A SINE Alu 1 133 0 233 268 0 152 chr17 21360502 21360552 -68144001 - MER5B DNA MER1_type -121 57 1 2081 118 10 10 chr17 21361590 21361886 -68142667 - AluSx SINE Alu -16 296 1 376 235 17 61 chr17 21362350 21362465 -68142088 + MIR3 SINE MIR 94 203 -5 2593 66 0 0 chr17 21363384 21363687 -68140866 - AluY SINE Alu -8 303 1 227 232 61 71 chr17 21364114 21364213 -68140340 + L2 LINE L2 3144 3241 -31 273 269 81 47 chr17 21364816 21365050 -68139503 - L1MC4a LINE L1 -1761 6047 5806 1051 266 55 2 chr17 21365342 21365683 -68138870 - L1MC4a LINE L1 -2181 5627 5260 403 294 68 0 chr17 21365927 21366073 -68138480 - MLT1I LTR MaLR -8 401 246 201 74 0 0 chr17 21366084 21366111 -68138442 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 1866 155 3 3 chr17 21366123 21366413 -68138140 + AluSx SINE Alu 1 290 -22 2204 87 3 17 chr17 21366415 21366727 -68137826 + AluSp SINE Alu 1 308 0 505 115 29 29 chr17 21366771 21366875 -68137678 - L1MB8 LINE L1 -100 6078 5975 1859 210 47 5 chr17 21366888 21367316 -68137237 - L1MB7 LINE L1 -104 6080 5635 325 303 115 0 chr17 21367390 21367512 -68137041 - MLT1I LTR MaLR -256 153 18 253 268 0 37 chr17 21368433 21368515 -68136038 - MER5A DNA MER1_type -110 79 1 312 316 147 46 chr17 21369559 21369885 -68134668 - MLT1K LTR MaLR -90 498 140 1376 151 6 114 chr17 21370413 21370737 -68133816 - AluJb SINE Alu -23 289 1 2063 137 3 13 chr17 21371346 21371659 -68132894 + AluSq SINE Alu 3 312 -1 1260 124 19 29 chr17 21372028 21372237 -68132316 + AluY SINE Alu 7 213 -98 439 217 48 85 chr17 21372724 21372797 -68131756 + MER5A DNA MER1_type 5 79 -110 2051 122 6 51 chr17 21372797 21372942 -68131611 + AluSx SINE Alu 2 127 -185 2321 68 19 10 chr17 21372942 21373250 -68131303 + AluY SINE Alu 1 311 0 2051 122 6 51 chr17 21373250 21373416 -68131137 + AluSx SINE Alu 127 299 -13 439 217 48 85 chr17 21373416 21373531 -68131022 + MER5A DNA MER1_type 79 186 -3 192 257 100 0 chr17 21373559 21373629 -68130924 - MIR3 SINE MIR -54 154 78 1801 142 62 17 chr17 21374205 21374493 -68130060 - AluSx SINE Alu -11 301 1 243 262 177 14 chr17 21374745 21374868 -68129685 + MIR SINE MIR 15 150 -68 2411 79 0 16 chr17 21375049 21375354 -68129199 - AluSc SINE Alu -8 301 2 379 198 0 25 chr17 21375585 21375666 -68128887 + MIR SINE MIR 71 149 -113 229 323 104 0 chr17 21375780 21375876 -68128677 - L2 LINE L2 -13 3259 3154 2125 106 3 23 chr17 21376114 21376415 -68128138 + AluSx SINE Alu 1 295 -17 2379 65 13 20 chr17 21377220 21377526 -68127027 + AluSx SINE Alu 1 304 -8 412 204 31 10 chr17 21377996 21378094 -68126459 + MIR SINE MIR 37 136 -72 917 159 0 55 chr17 21379916 21380079 -68124474 - FRAM SINE Alu -21 155 2 311 358 8 23 chr17 21380238 21380449 -68124104 + L1ME3A LINE L1 5701 5910 -252 747 296 10 5 chr17 21381569 21381775 -68122778 + MIR SINE MIR 8 214 -48 207 175 0 0 chr17 21382655 21382695 -68121858 - MIR SINE MIR -14 248 209 299 180 105 22 chr17 21385576 21385678 -68118875 + MIR SINE MIR 34 153 -61 200 306 5 48 chr17 21385775 21385961 -68118592 + (CA)n Simple_repeat Simple_repeat 2 179 0 238 231 231 0 chr17 21386869 21386977 -68117576 + L2 LINE L2 2673 2805 -509 509 92 11 46 chr17 21387340 21387427 -68117126 - MER53 DNA DNA 0 189 106 438 138 11 46 chr17 21387352 21387439 -68117114 + MER53 DNA DNA 23 106 -83 * 237 111 0 0 chr17 21387438 21387474 -68117079 - MER53 DNA DNA -153 36 1 * 668 200 17 74 chr17 21387633 21387808 -68116745 + MER63B DNA MER1_type 1 165 -271 416 294 44 44 chr17 21387828 21388056 -68116497 + L2 LINE L2 2911 3138 -175 1292 155 28 40 chr17 21388228 21388479 -68116074 - AluJo SINE Alu -64 248 1 412 215 48 39 chr17 21388616 21388751 -68115802 - MIR SINE MIR -62 146 38 289 360 27 0 chr17 21388883 21389033 -68115520 - MIR3 SINE MIR -42 166 13 243 329 38 44 chr17 21389322 21389480 -68115073 - L2 LINE L2 -174 3098 2942 251 168 11 116 chr17 21389480 21389541 -68115012 + L1MB5 LINE L1 6081 6130 -44 2408 82 0 7 chr17 21389541 21389845 -68114708 + AluSq SINE Alu 1 302 -11 251 168 11 116 chr17 21389845 21389878 -68114675 + L1MB5 LINE L1 6130 6165 -9 1128 180 57 2 chr17 21389918 21390267 -68114286 + LTR47A LTR ERVL 1 444 -8 417 244 67 32 chr17 21390504 21390654 -68113899 + MIR SINE MIR 28 153 -55 223 300 22 11 chr17 21390952 21391042 -68113511 + L3 LINE CR1 1392 1482 -95 254 318 45 8 chr17 21391088 21391220 -68113333 - L2 LINE L2 -222 3050 2914 367 136 252 19 chr17 21391337 21391440 -68113113 - MIR SINE MIR -55 207 81 1046 166 4 31 chr17 21391771 21392000 -68112553 + L1MC1 LINE L1 5815 6037 -296 377 253 157 11 chr17 21392006 21392184 -68112369 + HAL1 LINE L1 1197 1400 -1107 2122 116 0 0 chr17 21392873 21393141 -68111412 - AluSg SINE Alu -40 270 3 281 268 160 28 chr17 21393172 21393385 -68111168 + MLT1L LTR MaLR 348 588 -27 1693 186 13 31 chr17 21393391 21393709 -68110844 - AluJb SINE Alu 0 312 1 2234 129 0 3 chr17 21393723 21394033 -68110520 - AluSc SINE Alu 0 309 1 650 211 144 39 chr17 21394066 21394274 -68110279 - MLT1K LTR MaLR -70 518 289 1222 101 24 24 chr17 21394276 21394445 -68110108 - AluSp SINE Alu -11 302 134 2340 95 3 3 chr17 21394446 21394740 -68109813 - AluSq SINE Alu -19 294 1 485 212 38 53 chr17 21394743 21394875 -68109678 - MLT1K LTR MaLR -296 292 163 1576 157 56 22 chr17 21394944 21395212 -68109341 + AluJb SINE Alu 6 282 -30 249 33 0 0 chr17 21395217 21395247 -68109306 + (CA)n Simple_repeat Simple_repeat 1 30 0 957 108 8 0 chr17 21395250 21395379 -68109174 + AluSq/x SINE Alu 1 130 -183 2132 116 13 17 chr17 21395380 21395517 -68109036 + AluSq SINE Alu 1 137 -176 1914 119 45 14 chr17 21395517 21395827 -68108726 + AluSx SINE Alu 1 312 0 2132 116 13 17 chr17 21395827 21395991 -68108562 + AluSq SINE Alu 137 301 -12 585 249 96 11 chr17 21395997 21396174 -68108379 + MIR SINE MIR 31 222 -40 334 274 29 0 chr17 21396515 21396617 -68107936 - MIR SINE MIR -88 174 70 239 264 69 0 chr17 21397105 21397177 -68107376 + MIR SINE MIR 116 192 -70 183 309 18 0 chr17 21397492 21397564 -68106989 + MIR SINE MIR 92 143 -65 2352 109 0 0 chr17 21397565 21397867 -68106686 + AluSg SINE Alu 2 303 -7 1069 216 5 10 chr17 21397903 21398111 -68106442 - MER3 DNA MER1_type -2 207 1 524 247 16 6 chr17 21398520 21398702 -68105851 + L1 LINE L1 3239 3422 -2724 381 248 28 28 chr17 21398746 21398855 -68105698 - MIR3 SINE MIR -34 174 66 183 245 0 41 chr17 21399090 21399139 -68105414 + L2 LINE L2 3240 3286 -27 365 229 150 20 chr17 21399254 21399407 -68105146 - L1ME3A LINE L1 0 6170 5998 21 89 0 0 chr17 21399771 21399827 -68104726 + GC_rich Low_complexity Low_complexity 1 56 0 611 256 26 42 chr17 21399897 21400088 -68104465 - AluJo SINE Alu -124 188 1 747 159 80 0 chr17 21400088 21400251 -68104302 - L1ME3A LINE L1 -586 5758 5583 325 111 42 0 chr17 21400251 21400323 -68104230 - MLT1B LTR MaLR -8 382 308 883 98 0 23 chr17 21400324 21400457 -68104096 + AluSq/x SINE Alu 1 130 -183 1492 128 22 25 chr17 21400458 21400732 -68103821 + AluSx SINE Alu 1 273 -39 1979 14 0 0 chr17 21401022 21401239 -68103314 - U3 snRNA snRNA 0 217 1 1253 156 12 132 chr17 21401520 21401847 -68102706 + AluJo SINE Alu 3 290 -12 1885 146 30 35 chr17 21401851 21402221 -68102332 - L1MB4 LINE L1 0 6180 5813 1495 156 0 23 chr17 21402221 21402484 -68102069 - AluJb SINE Alu -54 258 2 1507 250 65 48 chr17 21402485 21402540 -68102013 - L1M4 LINE L1 -1770 4376 4323 1986 112 20 0 chr17 21402540 21402835 -68101718 + AluSq SINE Alu 1 301 -12 1507 250 65 48 chr17 21402835 21403031 -68101522 - L1M4 LINE L1 -1823 4323 4132 2155 114 0 16 chr17 21403031 21403346 -68101207 + AluSg SINE Alu 1 310 0 1507 250 65 48 chr17 21403346 21403658 -68100895 - L1M4 LINE L1 -2014 4132 3802 773 142 0 0 chr17 21403658 21403785 -68100768 + LOR1a LTR ERV1 371 497 0 247 208 0 0 chr17 21403846 21403894 -68100659 + MLT1B LTR MaLR 278 325 -65 2067 124 7 0 chr17 21403894 21404184 -68100369 - AluSx SINE Alu -20 292 1 428 95 0 0 chr17 21404188 21404251 -68100302 - AluSp/q SINE Alu -7 306 244 606 148 52 0 chr17 21404253 21404368 -68100185 + L1MC/D LINE L1 5638 5758 -586 675 208 8 0 chr17 21404369 21404494 -68100059 + FLAM_A SINE Alu 1 126 -7 2088 113 0 19 chr17 21404503 21404822 -68099731 + AluSq SINE Alu 1 313 0 2061 131 30 0 chr17 21404826 21405124 -68099429 + AluSc SINE Alu 1 307 -2 1132 235 67 28 chr17 21405151 21405494 -68099059 + L1MCa LINE L1 2308 2690 -3736 1803 143 30 10 chr17 21405494 21405795 -68098758 + AluSx SINE Alu 1 307 -5 1132 235 67 28 chr17 21405795 21406076 -68098477 + L1MCa LINE L1 2690 2959 -3467 800 164 0 0 chr17 21406116 21406244 -68098309 - AluJo SINE Alu -55 257 130 2332 89 0 16 chr17 21406253 21406569 -68097984 - AluY SINE Alu 0 311 1 818 125 0 0 chr17 21406636 21406748 -68097805 - AluJo SINE Alu -187 125 14 2330 75 3 0 chr17 21406778 21407072 -68097481 - AluSp SINE Alu -18 295 1 2184 95 0 7 chr17 21407088 21407384 -68097169 - AluSc SINE Alu -15 294 1 2262 94 0 16 chr17 21407695 21408003 -68096550 - AluSx SINE Alu -9 303 1 1086 190 29 33 chr17 21408250 21408673 -68095880 - L1M4 LINE L1 -713 6282 5854 873 240 0 0 chr17 21408698 21408898 -68095655 - AluJb SINE Alu 0 312 113 250 246 0 0 chr17 21408898 21408967 -68095586 - L1M4 LINE L1 -1459 5498 5430 * 3784 236 48 92 chr17 21408943 21408999 -68095554 - L1M4 LINE L1 -5187 1672 1615 1674 79 169 8 chr17 21408999 21409265 -68095288 - AluSg1 SINE Alu 0 309 1 3784 236 48 92 chr17 21409265 21409306 -68095247 - L1M4 LINE L1 -5244 1615 1574 2135 102 0 46 chr17 21409306 21409629 -68094924 - AluSg SINE Alu -1 309 2 3784 236 48 92 chr17 21409629 21410171 -68094382 - L1M4 LINE L1 -5285 1574 1010 2258 95 0 25 chr17 21410171 21410488 -68094065 - AluSg1 SINE Alu 0 309 1 3784 236 48 92 chr17 21410488 21410784 -68093769 - L1M4 LINE L1 -5849 1010 703 1935 72 4 4 chr17 21410784 21411035 -68093518 + AluSq SINE Alu 1 251 -62 3784 236 48 92 chr17 21411035 21411749 -68092804 - L1M4 LINE L1 -6156 703 137 1624 176 7 29 chr17 21411750 21412056 -68092497 - AluJo SINE Alu -13 299 1 1232 144 51 0 chr17 21412076 21412271 -68092282 - AluSg/x SINE Alu 0 312 108 585 138 0 0 chr17 21412271 21412351 -68092202 + AluSp/q SINE Alu 211 290 -23 494 231 41 0 chr17 21412502 21412623 -68091930 - MLT1D LTR MaLR -379 126 1 1457 133 78 0 chr17 21412731 21413001 -68091552 + MER4B LTR ERV1 3 293 -317 2245 91 0 49 chr17 21413001 21413194 -68091359 - AluSq SINE Alu 0 313 141 2258 94 3 0 chr17 21413194 21413482 -68091071 - AluSq SINE Alu -24 289 1 2245 91 0 49 chr17 21413482 21413617 -68090936 - AluSq SINE Alu -172 141 1 255 242 158 21 chr17 21413882 21413977 -68090576 + MIR SINE MIR 9 116 -146 803 117 0 0 chr17 21414390 21414501 -68090052 - AluSg/x SINE Alu -13 299 189 905 183 15 0 chr17 21414502 21414699 -68089854 + L1MC4 LINE L1 6885 7084 -958 477 263 49 49 chr17 21414715 21414958 -68089595 - L1MC4a LINE L1 -1213 6595 6353 552 92 0 0 chr17 21414959 21415035 -68089518 - AluSx SINE Alu -5 306 231 1027 136 0 12 chr17 21415035 21415197 -68089356 + AluJb SINE Alu 50 209 -103 1691 115 0 4 chr17 21415204 21415439 -68089114 - AluSx SINE Alu -78 234 1 334 349 47 8 chr17 21415495 21415624 -68088929 - L2 LINE L2 -233 3039 2906 532 269 15 13 chr17 21416389 21416542 -68088011 + MIR SINE MIR 48 199 -44 202 200 0 25 chr17 21416609 21416689 -68087864 + GA-rich Low_complexity Low_complexity 1 78 0 281 270 27 0 chr17 21416995 21417069 -68087484 + MIR3 SINE MIR 89 164 -44 270 236 0 0 chr17 21417211 21417266 -68087287 - MIR SINE MIR -115 147 93 213 357 54 0 chr17 21418154 21418266 -68086287 + L2 LINE L2 2571 2688 -626 963 278 99 50 chr17 21418293 21418736 -68085817 + L2 LINE L2 2839 3303 -10 1956 65 0 4 chr17 21418954 21419200 -68085353 + AluSc SINE Alu 65 309 0 2089 107 3 13 chr17 21419498 21419798 -68084755 - AluSx SINE Alu -15 297 1 300 296 78 0 chr17 21420294 21420409 -68084144 + MIR SINE MIR 63 186 -76 21 0 0 0 chr17 21420478 21420499 -68084054 + GC_rich Low_complexity Low_complexity 1 21 0 288 248 89 30 chr17 21421582 21421683 -68082870 + MIR3 SINE MIR 48 154 -54 386 264 61 18 chr17 21422222 21422385 -68082168 - L2 LINE L2 -219 3053 2884 234 273 34 11 chr17 21422712 21422800 -68081753 + MIR SINE MIR 27 116 -146 245 290 65 36 chr17 21423527 21423665 -68080888 - L2 LINE L2 -182 3090 2949 374 318 52 0 chr17 21423700 21423854 -68080699 - MIR SINE MIR -68 194 33 281 261 52 78 chr17 21423912 21424027 -68080526 + MIR3 SINE MIR 58 169 -39 363 261 166 51 chr17 21424608 21424861 -68079692 - LTR16C LTR ERVL -6 485 204 255 186 0 0 chr17 21425196 21425239 -68079314 + MIR3 SINE MIR 112 154 -54 1937 162 64 9 chr17 21425309 21425655 -68078898 - MLT1A1 LTR MaLR 0 365 1 1930 102 7 62 chr17 21425954 21426258 -68078295 + AluSc SINE Alu 2 288 -21 2212 84 3 3 chr17 21426261 21426559 -68077994 - AluY SINE Alu -13 298 1 602 198 8 40 chr17 21426566 21426692 -68077861 - FLAM_A SINE Alu -9 124 3 513 269 28 7 chr17 21426808 21426953 -68077600 + MIR SINE MIR 7 154 -108 766 237 153 0 chr17 21427588 21427778 -68076775 + MIR SINE MIR 15 233 -29 809 270 131 29 chr17 21428001 21428656 -68075897 - L2 LINE L2 0 3272 2539 2307 110 0 0 chr17 21428873 21429183 -68075370 + AluSx SINE Alu 1 310 -2 1880 176 126 8 chr17 21429550 21429931 -68074622 - MSTB LTR MaLR 0 426 1 189 250 0 0 chr17 21430081 21430125 -68074428 + MIR SINE MIR 109 152 -56 471 282 26 6 chr17 21430826 21430982 -68073571 - L2 LINE L2 -221 3051 2893 430 231 48 101 chr17 21431331 21431479 -68073074 + MIR SINE MIR 5 143 -65 530 275 109 24 chr17 21432155 21432366 -68072187 - L2 LINE L2 -21 3292 3064 398 273 43 29 chr17 21432431 21432570 -68071983 - MIR3 SINE MIR -63 145 5 268 253 24 36 chr17 21432664 21432747 -68071806 - MIR3 SINE MIR -53 155 74 330 26 0 0 chr17 21432863 21432902 -68071651 + (CTG)n Simple_repeat Simple_repeat 3 41 0 205 175 25 0 chr17 21433749 21433789 -68070764 - L2 LINE L2 -18 3254 3214 257 347 123 6 chr17 21434706 21434876 -68069677 - L2 LINE L2 -160 3112 2923 1486 126 20 157 chr17 21434894 21435244 -68069309 + AluYb8 SINE Alu 1 302 -16 369 0 0 0 chr17 21435604 21435645 -68068908 + (TG)n Simple_repeat Simple_repeat 1 41 0 207 318 55 0 chr17 21436010 21436126 -68068427 - MIR SINE MIR -61 147 60 270 304 16 48 chr17 21436334 21436459 -68068094 + MIR SINE MIR 45 165 -97 2163 69 34 10 chr17 21436597 21436888 -68067665 - AluY SINE Alu -13 298 1 2529 54 0 6 chr17 21437216 21437529 -68067024 + AluY SINE Alu 1 311 0 2417 77 0 3 chr17 21437638 21437950 -68066603 + AluY SINE Alu 1 311 0 319 215 63 0 chr17 21438452 21438531 -68066022 - MIR SINE MIR -75 133 50 377 250 154 0 chr17 21439140 21439244 -68065309 + L2 LINE L2 3193 3312 -1 364 228 13 0 chr17 21439309 21439388 -68065165 - MIR SINE MIR -110 152 73 306 239 91 0 chr17 21440405 21440493 -68064060 - MIR SINE MIR -68 140 45 180 328 147 17 chr17 21440638 21440754 -68063799 - MIR3 SINE MIR -70 138 8 202 244 106 65 chr17 21441203 21441326 -68063227 - MIR3 SINE MIR -67 141 14 208 114 0 68 chr17 21442986 21443030 -68061523 + (TGGGGG)n Simple_repeat Simple_repeat 4 44 0 504 281 99 26 chr17 21443999 21444191 -68060362 + L2 LINE L2 3108 3313 0 261 336 123 0 chr17 21444192 21444338 -68060215 + L2 LINE L2 2847 3010 -262 258 401 154 7 chr17 21444532 21444804 -68059749 - L2 LINE L2 0 3272 2961 223 297 0 0 chr17 21445912 21445976 -68058577 - MIR SINE MIR -119 143 80 1458 88 5 51 chr17 21446746 21446792 -68057761 + L1PB1 LINE L1 5928 5975 -176 1950 125 35 0 chr17 21446792 21447081 -68057472 + AluSx SINE Alu 1 299 -13 1458 88 5 51 chr17 21447081 21447251 -68057302 + L1PB1 LINE L1 5975 6134 -17 340 264 19 0 chr17 21448433 21448531 -68056022 - MIR SINE MIR -63 145 64 518 329 6 6 chr17 21449372 21449533 -68055020 - MIR SINE MIR -35 227 67 182 332 193 25 chr17 21450540 21450742 -68053811 + L2 LINE L2 3077 3312 -1 691 351 34 37 chr17 21451703 21452113 -68052440 + L2 LINE L2 2864 3272 0 197 195 40 121 chr17 21453053 21453202 -68051351 + L2 LINE L2 2844 2980 -292 1534 160 15 105 chr17 21453609 21453952 -68050601 + AluJb SINE Alu 1 312 0 1938 151 3 3 chr17 21454017 21454328 -68050225 + AluSx SINE Alu 1 311 -1 2339 71 0 0 chr17 21454332 21454628 -68049925 + AluY SINE Alu 2 297 -14 1386 235 0 26 chr17 21454671 21454831 -68049722 + L1MD2 LINE L1 4928 5091 -1055 2274 206 15 13 chr17 21454831 21455291 -68049262 + MER65C LTR ERV1 1 461 0 1386 235 0 26 chr17 21455291 21455509 -68049044 + L1MD2 LINE L1 5091 5296 -850 1257 176 0 9 chr17 21455511 21455732 -68048821 + AluJo SINE Alu 87 305 -7 4281 173 50 32 chr17 21455733 21456597 -68047956 + L1MD2 LINE L1 5281 6166 -193 1517 123 60 96 chr17 21456597 21456899 -68047654 + AluJo SINE Alu 7 297 -15 4281 173 50 32 chr17 21456899 21457007 -68047546 + L1MD2 LINE L1 6166 6271 -88 200 306 0 0 chr17 21458107 21458156 -68046397 + MIR SINE MIR 70 118 -90 25 65 0 0 chr17 21458345 21458391 -68046162 + GC_rich Low_complexity Low_complexity 1 46 0 189 0 0 0 chr17 21458837 21458858 -68045695 + (CCCCAG)n Simple_repeat Simple_repeat 2 22 0 37 52 0 0 chr17 21458882 21458940 -68045613 + GC_rich Low_complexity Low_complexity 1 58 0 253 242 0 15 chr17 21460501 21460567 -68043986 + MER117 DNA MER1_type 42 106 -91 195 333 90 62 chr17 21460839 21460983 -68043570 + MIR SINE MIR 60 207 -55 219 69 0 0 chr17 21460992 21461021 -68043532 + (GGA)n Simple_repeat Simple_repeat 2 30 0 186 280 108 65 chr17 21461147 21461240 -68043313 - MIR3 SINE MIR -23 185 89 347 327 115 6 chr17 21461753 21461909 -68042644 - MIR3 SINE MIR -33 175 3 231 298 120 38 chr17 21461972 21462130 -68042423 - MIR3 SINE MIR -19 189 19 440 339 94 0 chr17 21462661 21462832 -68041721 + MIR3 SINE MIR 22 208 0 224 195 221 13 chr17 21463245 21463322 -68041231 - MIR3 SINE MIR -29 179 87 509 276 47 75 chr17 21463491 21463705 -68040848 - MIR SINE MIR -15 247 40 2349 92 0 0 chr17 21463828 21464131 -68040422 - AluSg SINE Alu -6 304 2 302 316 17 42 chr17 21464566 21464711 -68039842 - MIR SINE MIR -64 144 38 222 200 226 0 chr17 21464748 21464834 -68039719 + MIR SINE MIR 37 147 -115 363 298 53 72 chr17 21465089 21465297 -68039256 + MIR SINE MIR 47 250 -12 237 200 0 0 chr17 21465376 21465421 -68039132 + L3 LINE CR1 1424 1468 -109 293 226 95 12 chr17 21465430 21465514 -68039039 + MIR SINE MIR 17 107 -101 468 280 51 17 chr17 21466077 21466252 -68038301 - MIR3 SINE MIR -3 205 25 3687 256 73 40 chr17 21466869 21467200 -68037353 - L1MEc LINE L1 -4696 1700 1382 2230 115 0 0 chr17 21467200 21467504 -68037049 - AluSx SINE Alu -8 304 1 3687 256 73 40 chr17 21467504 21468191 -68036362 - L1MEc LINE L1 -5014 1382 719 694 270 93 0 chr17 21468191 21468395 -68036158 + MER58A DNA MER1_type 2 224 0 3687 256 73 40 chr17 21468395 21468985 -68035568 - L1MEc LINE L1 -5677 719 37 418 230 248 0 chr17 21469210 21469371 -68035182 - MIR SINE MIR -51 211 11 254 210 20 90 chr17 21469385 21469485 -68035068 - MIR3 SINE MIR -21 187 95 341 273 61 0 chr17 21470365 21470464 -68034089 - MIR3 SINE MIR -16 192 88 195 305 0 0 chr17 21470787 21470846 -68033707 + MIR SINE MIR 89 147 -61 258 333 0 0 chr17 21471722 21471812 -68032741 - MIR3 SINE MIR -17 191 102 186 397 0 0 chr17 21471923 21471986 -68032567 - L2 LINE L2 -85 3187 3125 411 307 26 0 chr17 21471987 21472101 -68032452 + MIR SINE MIR 91 207 -55 378 329 146 0 chr17 21472880 21473099 -68031454 - L3 LINE CR1 -96 1481 1231 201 294 35 24 chr17 21473262 21473347 -68031206 + MIR SINE MIR 59 144 -118 378 228 54 0 chr17 21473547 21473639 -68030914 - MIR SINE MIR -70 138 42 201 239 57 68 chr17 21473829 21473917 -68030636 + MIR SINE MIR 38 124 -84 234 329 0 25 chr17 21474927 21475006 -68029547 - L2 LINE L2 0 3272 3196 * 292 255 53 21 chr17 21474995 21475089 -68029464 - L3 LINE CR1 -65 1512 1416 578 302 22 16 chr17 21475161 21475343 -68029210 - L3 LINE CR1 -79 1498 1316 307 259 99 15 chr17 21475465 21475596 -68028957 + MIR3 SINE MIR 2 143 -65 485 309 65 0 chr17 21475708 21475847 -68028706 - MIR SINE MIR -1 261 114 299 309 65 22 chr17 21476567 21476706 -68027847 - MIR3 SINE MIR -14 194 50 230 293 110 61 chr17 21476996 21477160 -68027393 + MIR SINE MIR 40 211 -51 426 267 67 18 chr17 21477758 21477903 -68026650 + MIR SINE MIR 41 192 -62 2351 53 30 0 chr17 21478769 21479068 -68025485 - AluY SINE Alu -3 308 1 508 253 209 6 chr17 21479072 21479254 -68025299 + MER20 DNA MER1_type 1 219 0 210 291 175 0 chr17 21479772 21479875 -68024678 + MIR SINE MIR 69 189 -73 192 286 39 13 chr17 21479924 21480001 -68024552 + MIR SINE MIR 42 120 -88 306 352 28 42 chr17 21480117 21480259 -68024294 - MIR SINE MIR -14 248 109 207 259 48 102 chr17 21480227 21480374 -68024179 - MIR3 SINE MIR -67 141 3 * 223 200 33 17 chr17 21480561 21480621 -68023932 - MIR SINE MIR -58 150 90 189 319 29 0 chr17 21480922 21480991 -68023562 - MIR SINE MIR -79 129 59 229 346 43 43 chr17 21482093 21482281 -68022272 + L3 LINE CR1 1319 1506 -71 216 268 90 10 chr17 21482235 21482338 -68022215 + MER5A DNA MER1_type 25 131 -47 * 304 238 12 25 chr17 21485862 21485942 -68018611 - MIR SINE MIR -116 146 68 220 195 35 138 chr17 21486830 21486917 -68017636 + MIR3 SINE MIR 125 202 -6 2319 48 7 7 chr17 21486932 21487222 -68017331 - AluY SINE Alu -21 290 1 534 121 71 30 chr17 21487234 21487333 -68017220 - L1MB8 LINE L1 0 6178 6076 2315 70 0 17 chr17 21487419 21487721 -68016832 - AluSp SINE Alu -16 297 1 312 255 43 21 chr17 21487875 21487969 -68016584 + MIR3 SINE MIR 60 155 -53 198 209 141 18 chr17 21488315 21488393 -68016160 + MIR SINE MIR 90 176 -56 288 318 0 36 chr17 21488590 21488700 -68015853 - MIR3 SINE MIR -10 198 93 1977 112 3 41 chr17 21488817 21488938 -68015615 + AluSx SINE Alu 14 138 -174 2305 92 0 22 chr17 21488938 21489255 -68015298 + AluSg SINE Alu 1 310 0 1977 112 3 41 chr17 21489255 21489427 -68015126 + AluSx SINE Alu 138 296 -16 209 121 0 0 chr17 21490171 21490204 -68014349 - MIR SINE MIR -62 146 114 2310 68 0 23 chr17 21490241 21490548 -68014005 - AluY SINE Alu -11 300 1 454 305 53 7 chr17 21491159 21491310 -68013243 - MIR SINE MIR -80 182 25 275 247 41 0 chr17 21493134 21493207 -68011346 - L3 LINE CR1 -89 1488 1413 211 209 105 35 chr17 21494109 21494195 -68010358 + MIR SINE MIR 57 148 -60 288 316 103 7 chr17 21495284 21495420 -68009133 - MIR3 SINE MIR 0 208 60 209 255 19 85 chr17 21495575 21495681 -68008872 + L2 LINE L2 2870 2968 -304 201 158 26 0 chr17 21495753 21495791 -68008762 + CT-rich Low_complexity Low_complexity 1 39 0 305 313 9 18 chr17 21496079 21496191 -68008362 + MIR SINE MIR 36 146 -116 2218 69 49 0 chr17 21496359 21496647 -68007906 - AluSx SINE Alu -10 302 1 196 333 14 0 chr17 21496652 21496721 -68007832 - MIR3 SINE MIR -49 159 90 287 363 9 18 chr17 21497148 21497261 -68007292 - MIR SINE MIR -81 181 70 203 328 92 0 chr17 21497829 21497948 -68006605 + L2 LINE L2 2457 2586 -728 1836 81 0 5 chr17 21498046 21498268 -68006285 - AluSx SINE Alu -91 221 1 582 240 0 32 chr17 21498716 21498870 -68005683 + MER58B DNA MER1_type 193 341 0 663 168 68 11 chr17 21499041 21499258 -68005295 - L2 LINE L2 -297 3016 2784 303 213 246 8 chr17 21499798 21499920 -68004633 + MIR3 SINE MIR 34 184 -24 1498 145 31 4 chr17 21499965 21500192 -68004361 - AluSx SINE Alu -79 233 1 465 299 57 0 chr17 21501823 21501980 -68002573 + MIR3 SINE MIR 27 192 -16 433 229 19 19 chr17 21502312 21502417 -68002136 + MIR3 SINE MIR 77 181 -27 183 324 70 18 chr17 21502775 21503047 -68001506 - L2 LINE L2 -570 2744 2459 212 333 56 0 chr17 21503580 21503688 -68000865 + MIR3 SINE MIR 8 121 -87 2927 154 55 76 chr17 21504468 21504773 -67999780 + L1MB5 LINE L1 5514 5824 -350 1610 181 39 0 chr17 21504773 21505055 -67999498 + AluJb SINE Alu 5 297 -15 2927 154 55 76 chr17 21505055 21505370 -67999183 + L1MB5 LINE L1 5824 6122 -52 2346 52 11 0 chr17 21505370 21505674 -67998879 + AluSc SINE Alu 6 312 0 2927 154 55 76 chr17 21505674 21505726 -67998827 + L1MB5 LINE L1 6122 6174 0 474 294 15 50 chr17 21505814 21505960 -67998593 + MIR SINE MIR 22 161 -101 1865 121 8 4 chr17 21505960 21506224 -67998329 - AluSx SINE Alu -9 303 39 474 294 15 50 chr17 21506224 21506278 -67998275 + MIR SINE MIR 161 215 -47 2087 156 3 0 chr17 21506355 21506663 -67997890 + AluJb SINE Alu 3 311 -1 2447 60 3 0 chr17 21506874 21507204 -67997349 - AluSp SINE Alu 0 331 1 664 197 24 0 chr17 21507206 21507333 -67997220 - FLAM_A SINE Alu -2 131 2 246 240 0 0 chr17 21507452 21507502 -67997051 + MER91B DNA MER1_type 1 50 -140 353 229 203 0 chr17 21507698 21507816 -67996737 - MIR SINE MIR -75 187 46 2218 82 9 48 chr17 21508003 21508319 -67996234 - AluSq SINE Alu -9 304 1 180 152 22 65 chr17 21508394 21508440 -67996113 + L2 LINE L2 3010 3053 -219 291 255 154 0 chr17 21509005 21509146 -67995407 - MIR SINE MIR -75 187 33 1109 208 14 0 chr17 21509182 21509389 -67995164 - MER46A DNA MER2_type 0 236 27 212 244 0 0 chr17 21509439 21509480 -67995073 + (CCA)n Simple_repeat Simple_repeat 3 43 0 197 259 0 0 chr17 21509558 21509612 -67994941 - MIR SINE MIR -62 146 93 2306 98 10 13 chr17 21509675 21509982 -67994571 + AluSg SINE Alu 1 306 -4 243 200 30 130 chr17 21510331 21510431 -67994122 - MER5A DNA MER1_type -30 159 70 262 336 44 0 chr17 21510552 21510665 -67993888 - MIR3 SINE MIR -39 169 52 2071 140 3 13 chr17 21512128 21512442 -67992111 + AluSx SINE Alu 1 311 -1 368 282 80 0 chr17 21513581 21513744 -67990809 + L1MC4a LINE L1 5722 5897 -1911 1886 143 48 17 chr17 21513860 21514154 -67990399 - AluJb SINE Alu -9 303 1 450 307 3 9 chr17 21514695 21514846 -67989707 - MIR SINE MIR -45 163 17 247 310 142 0 chr17 21515406 21515519 -67989034 + L2 LINE L2 2973 3101 -171 688 226 31 67 chr17 21515721 21515839 -67988714 - L1MB5 LINE L1 -8 6166 6045 2449 108 0 0 chr17 21515839 21516146 -67988407 - AluSx SINE Alu -5 307 1 688 226 31 67 chr17 21516146 21516296 -67988257 - L1MB5 LINE L1 -129 6045 5897 2366 185 113 93 chr17 21516316 21517228 -67987325 + MER21A LTR ERV1 2 931 0 1079 243 11 7 chr17 21517228 21517500 -67987053 - L1MB4 LINE L1 -247 5933 5661 26 0 0 0 chr17 21517500 21517526 -67987027 + AT_rich Low_complexity Low_complexity 1 26 0 1637 168 69 14 chr17 21517528 21517819 -67986734 - AluSx SINE Alu -5 307 1 950 176 44 0 chr17 21517857 21518039 -67986514 - L1MB4 LINE L1 -506 5674 5485 1220 182 5 14 chr17 21518041 21518255 -67986298 - AluJb SINE Alu -15 297 86 719 156 1 64 chr17 21518257 21518413 -67986140 - L1P4 LINE L1 -681 5487 5342 3297 172 55 83 chr17 21518417 21519180 -67985373 - L1MC1 LINE L1 -89 6524 5742 2151 120 3 0 chr17 21519180 21519489 -67985064 + AluSx SINE Alu 1 310 0 2064 95 18 21 chr17 21519491 21519805 -67984748 + AluSx SINE Alu 1 313 0 3297 172 55 83 chr17 21519805 21520071 -67984482 - L1MC1 LINE L1 -872 5741 5469 2176 122 0 25 chr17 21520071 21520390 -67984163 - AluY SINE Alu 0 311 1 3297 172 55 83 chr17 21520390 21520501 -67984052 - L1MC1 LINE L1 -1144 5469 5356 1825 164 0 26 chr17 21520501 21520811 -67983742 - AluJb SINE Alu -10 302 1 3297 172 55 83 chr17 21520811 21521170 -67983383 - L1MC1 LINE L1 -1257 5356 5082 696 125 0 31 chr17 21521184 21521312 -67983241 - AluSp/q SINE Alu -1 312 189 1945 67 0 28 chr17 21521351 21521604 -67982949 + AluY SINE Alu 45 290 -21 6812 138 114 100 chr17 21521663 21521753 -67982800 - L1MC1 LINE L1 -4514 1912 1825 2029 141 3 19 chr17 21521753 21522065 -67982488 + AluJb SINE Alu 1 307 -5 6812 138 114 100 chr17 21522065 21522684 -67981869 - L1MC1 LINE L1 -4601 1825 1216 2354 107 0 0 chr17 21522684 21522982 -67981571 + AluSx SINE Alu 1 298 -14 6812 138 114 100 chr17 21522982 21523206 -67981347 - L1MC1 LINE L1 -5210 1216 997 2144 123 3 10 chr17 21523206 21523506 -67981047 + AluSx SINE Alu 1 298 -14 2270 123 0 0 chr17 21523516 21523818 -67980735 + AluSx SINE Alu 1 302 -10 6812 138 114 100 chr17 21523818 21524727 -67979826 - L1MC1 LINE L1 -5437 989 30 839 151 5 76 chr17 21524730 21524782 -67979771 - L1MB5 LINE L1 -8 6166 6112 2125 138 7 0 chr17 21524782 21525086 -67979467 + AluJb SINE Alu 1 306 -6 839 151 5 76 chr17 21525086 21525207 -67979346 - L1MB5 LINE L1 -62 6112 6004 2244 129 0 3 chr17 21525207 21525509 -67979044 + AluSg SINE Alu 1 301 -9 1937 113 3 17 chr17 21525560 21525852 -67978701 + MER1B DNA MER1_type 52 339 0 2186 191 35 12 chr17 21525884 21526083 -67978470 - L1MB5 LINE L1 -180 5994 5801 1744 151 4 22 chr17 21526083 21526379 -67978174 - AluSx SINE Alu 0 309 19 2186 191 35 12 chr17 21526379 21526666 -67977887 - L1MB5 LINE L1 -373 5801 5496 870 156 0 7 chr17 21526666 21526801 -67977752 - FLAM_A SINE Alu -1 141 8 497 179 17 60 chr17 21526808 21526966 -67977587 - L1MB5 LINE L1 -666 5500 5339 1771 174 43 0 chr17 21526973 21527272 -67977281 - AluSx SINE Alu 0 312 1 2522 191 111 49 chr17 21527282 21527340 -67977213 - L1MB5 LINE L1 -778 5368 5315 2447 82 0 0 chr17 21527340 21527634 -67976919 + AluSg SINE Alu 1 294 -16 213 39 0 0 chr17 21527635 21527661 -67976892 + (TA)n Simple_repeat Simple_repeat 2 27 0 2022 154 0 3 chr17 21527670 21527963 -67976590 + AluJb SINE Alu 1 292 -20 2522 191 111 49 chr17 21527963 21528309 -67976244 - L1MB5 LINE L1 -838 5308 4985 2204 110 0 58 chr17 21528309 21528636 -67975917 + AluSx SINE Alu 1 308 -4 2522 191 111 49 chr17 21528636 21529072 -67975481 - L1MB5 LINE L1 -1161 4985 4462 372 180 0 0 chr17 21529113 21529174 -67975379 - AluSc SINE Alu -9 290 230 866 107 0 0 chr17 21529233 21529345 -67975208 - AluSg/x SINE Alu -22 288 177 2922 10 0 0 chr17 21531224 21531531 -67973022 + AluYa5 SINE Alu 1 307 -4 198 0 0 0 chr17 21532763 21532785 -67971768 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2235 82 0 7 chr17 21532787 21533069 -67971484 - AluY SINE Alu -31 280 1 3181 182 32 24 chr17 21533091 21533768 -67970785 + L1MB7 LINE L1 5441 6123 -61 2237 102 0 3 chr17 21533768 21534085 -67970468 - AluSx SINE Alu 0 316 1 271 246 9 45 chr17 21534714 21534824 -67969729 + L1ME4a LINE L1 5991 6096 -25 24 53 0 0 chr17 21534858 21534896 -67969657 + AT_rich Low_complexity Low_complexity 1 38 0 1897 150 3 17 chr17 21535076 21535370 -67969183 + AluJb SINE Alu 1 290 -22 2532 199 52 9 chr17 21535410 21535826 -67968727 + L1MD2 LINE L1 5549 5996 -363 1252 179 110 71 chr17 21535826 21536207 -67968346 + MSTD LTR MaLR 1 396 0 2532 199 52 9 chr17 21536207 21536344 -67968209 + L1MD2 LINE L1 5996 6126 -233 309 82 0 0 chr17 21536345 21536394 -67968159 + (CA)n Simple_repeat Simple_repeat 1 49 0 566 246 66 6 chr17 21536402 21536585 -67967968 + L1MD2 LINE L1 6165 6358 -1 2361 89 0 7 chr17 21536594 21536887 -67967666 + AluSg SINE Alu 1 291 -19 342 0 0 0 chr17 21536890 21536928 -67967625 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2284 66 45 0 chr17 21537049 21537335 -67967218 - AluY SINE Alu -12 299 1 494 287 236 3 chr17 21537378 21537747 -67966806 + L1ME3A LINE L1 5493 5947 -223 2317 119 0 0 chr17 21538024 21538327 -67966226 - AluSx SINE Alu -9 303 1 2124 136 3 3 chr17 21538377 21538678 -67965875 - AluJb SINE Alu -11 301 1 2215 101 7 0 chr17 21538825 21539102 -67965451 + AluSx SINE Alu 1 279 -33 198 0 0 0 chr17 21539107 21539129 -67965424 + (CAAT)n Simple_repeat Simple_repeat 2 23 0 1572 230 46 11 chr17 21539258 21539760 -67964793 + L1MB5 LINE L1 3872 4385 -1761 2353 86 0 52 chr17 21539760 21540085 -67964468 + AluY SINE Alu 2 309 -2 1572 230 46 11 chr17 21540085 21540124 -67964429 + L1MB5 LINE L1 4385 4421 -1725 * 3831 158 87 50 chr17 21540096 21540186 -67964367 + L1MB5 LINE L1 5188 5273 -901 2041 148 0 16 chr17 21540186 21540496 -67964057 + AluJb SINE Alu 1 305 -7 3831 158 87 50 chr17 21540496 21541345 -67963208 + L1MB5 LINE L1 5273 6168 -6 862 249 20 10 chr17 21541407 21541604 -67962949 - MER20 DNA MER1_type -20 199 1 237 293 0 0 chr17 21541605 21541663 -67962890 + L1MC4 LINE L1 7605 7662 -380 432 321 107 7 chr17 21541776 21542047 -67962506 + L1ME4a LINE L1 5530 5827 -294 829 141 16 0 chr17 21542051 21542172 -67962381 + AluJb SINE Alu 178 300 -12 217 277 31 0 chr17 21542787 21542852 -67961701 - MIR3 SINE MIR -28 180 114 190 301 240 7 chr17 21543314 21543460 -67961093 + MIR SINE MIR 8 187 -75 1750 159 14 37 chr17 21543492 21543644 -67960909 - AluJo SINE Alu -23 289 146 2244 112 0 3 chr17 21543644 21543938 -67960615 - AluSg SINE Alu -17 293 1 1750 159 14 37 chr17 21543938 21544081 -67960472 - AluJo SINE Alu -166 146 1 974 227 106 0 chr17 21544172 21544445 -67960108 - MER33 DNA MER1_type -22 302 1 209 246 15 31 chr17 21544886 21544951 -67959602 - MIR SINE MIR -157 105 42 238 271 0 0 chr17 21545123 21545182 -67959371 + MER34C LTR ERV1 43 101 -484 1106 116 79 195 chr17 21545447 21545765 -67958788 + AluJo SINE Alu 20 300 -12 1766 159 50 31 chr17 21546169 21546478 -67958075 + MLT1A1 LTR MaLR 1 319 -46 2470 79 0 20 chr17 21546478 21546783 -67957770 + AluSp SINE Alu 1 299 -14 1766 159 50 31 chr17 21546783 21546831 -67957722 + MLT1A1 LTR MaLR 319 365 0 1193 181 39 24 chr17 21546831 21546990 -67957563 + MLT1A1-int LTR MaLR 1 167 -1568 1660 178 26 79 chr17 21546990 21547042 -67957511 + MSTB1 LTR MaLR 1 54 -378 2282 92 10 3 chr17 21547042 21547337 -67957216 + AluSx SINE Alu 1 297 -15 1660 178 26 79 chr17 21547337 21547740 -67956813 + MSTB1 LTR MaLR 54 432 0 1193 181 39 24 chr17 21547740 21547834 -67956719 + MLT1A1-int LTR MaLR 167 258 -1477 2128 146 0 3 chr17 21547834 21548135 -67956418 + AluJb SINE Alu 1 300 -12 2149 138 0 3 chr17 21548135 21548432 -67956121 + AluSx SINE Alu 1 296 -16 3300 210 101 122 chr17 21548438 21548602 -67955951 + MLT1A1-int LTR MaLR 407 573 -1162 1931 149 3 16 chr17 21548602 21548918 -67955635 + AluJo SINE Alu 1 312 0 3300 210 101 122 chr17 21548918 21548958 -67955595 + MLT1A1-int LTR MaLR 573 612 -1123 2184 117 0 23 chr17 21548958 21549267 -67955286 - AluSc SINE Alu -7 302 1 3300 210 101 122 chr17 21549267 21549318 -67955235 + MLT1A1-int LTR MaLR 612 663 -1072 2147 135 20 0 chr17 21549318 21549622 -67954931 + AluJb SINE Alu 1 310 -2 3300 210 101 122 chr17 21549622 21550321 -67954232 + MLT1A1-int LTR MaLR 663 1416 -319 482 186 0 0 chr17 21550321 21550407 -67954146 - AluJ/FLAM SINE Alu -225 87 2 3300 210 101 122 chr17 21550407 21550721 -67953832 + MLT1A1-int LTR MaLR 1416 1735 0 1245 185 80 74 chr17 21550721 21550959 -67953594 + MLT1A1 LTR MaLR 1 243 -122 2484 80 3 0 chr17 21550959 21551260 -67953293 - AluSp SINE Alu -11 302 1 1245 185 80 74 chr17 21551260 21551384 -67953169 + MLT1A1 LTR MaLR 243 365 0 435 322 80 67 chr17 21551390 21551763 -67952790 - L1ME4a LINE L1 -217 5904 5527 2271 236 50 43 chr17 21552462 21552714 -67951839 - L1ME1 LINE L1 -4 6162 5913 2108 139 0 16 chr17 21552714 21553023 -67951530 - AluSx SINE Alu -8 304 1 2271 236 50 43 chr17 21553023 21553239 -67951314 - L1ME1 LINE L1 -253 5913 5700 1848 116 60 0 chr17 21553239 21553513 -67951040 - AluSx SINE Alu 0 313 25 2271 236 50 43 chr17 21553513 21553616 -67950937 - L1ME1 LINE L1 -466 5700 5599 2435 70 0 10 chr17 21553616 21553918 -67950635 + AluY SINE Alu 1 299 -12 2271 236 50 43 chr17 21553918 21554022 -67950531 - L1ME1 LINE L1 -567 5599 5479 379 179 114 0 chr17 21554020 21554160 -67950393 - L1M4 LINE L1 -2865 3281 3126 * 189 107 0 0 chr17 21554251 21554279 -67950274 + (GGAAA)n Simple_repeat Simple_repeat 3 30 0 1972 94 13 82 chr17 21554986 21555304 -67949249 - AluSx SINE Alu -16 296 1 1930 259 49 8 chr17 21555304 21555917 -67948636 - L1M4 LINE L1 -3191 2955 2318 786 143 0 0 chr17 21556425 21556574 -67947979 - FLAM_C SINE Alu 0 149 1 2678 82 3 0 chr17 21556583 21556937 -67947616 - THE1A LTR MaLR 0 355 1 1790 160 38 0 chr17 21556943 21557236 -67947317 - AluSx SINE Alu -8 304 1 2340 72 10 7 chr17 21557736 21558028 -67946525 - AluY SINE Alu -10 301 9 1751 178 0 13 chr17 21558128 21558443 -67946110 - AluSx SINE Alu -1 311 1 3395 163 136 22 chr17 21558949 21559722 -67944831 - MER21B LTR ERV1 0 863 3 192 250 0 0 chr17 21560190 21560234 -67944319 + L2 LINE L2 3143 3186 -86 207 286 143 0 chr17 21560248 21560325 -67944228 - L2 LINE L2 -1 3271 3184 26 30 0 0 chr17 21560769 21560802 -67943751 + AT_rich Low_complexity Low_complexity 1 33 0 462 204 136 10 chr17 21560802 21560905 -67943648 - FLAM_C SINE Alu -25 118 3 589 266 229 8 chr17 21566588 21566942 -67937611 - L2 LINE L2 -18 3295 2864 190 214 0 71 chr17 21567173 21567229 -67937324 - L2 LINE L2 -509 2805 2754 949 271 87 28 chr17 21567267 21567388 -67937165 - L2 LINE L2 -656 2658 2546 2668 65 0 0 chr17 21567388 21567697 -67936856 - AluY SINE Alu -2 309 1 949 271 87 28 chr17 21567697 21568011 -67936542 - L2 LINE L2 -768 2546 2197 2141 117 23 3 chr17 21568039 21568338 -67936215 - AluSx SINE Alu -7 305 1 211 298 48 0 chr17 21568500 21568584 -67935969 - MIR SINE MIR -72 136 49 282 56 0 0 chr17 21569018 21569054 -67935499 + (A)n Simple_repeat Simple_repeat 1 36 0 2518 52 23 10 chr17 21569750 21570060 -67934493 - AluYb8 SINE Alu -4 314 1 2146 102 38 7 chr17 21571417 21571710 -67932843 + AluSq SINE Alu 1 302 -11 1539 161 0 97 chr17 21571713 21572024 -67932529 - AluJb SINE Alu -31 281 1 2268 106 3 10 chr17 21572129 21572432 -67932121 + AluSx SINE Alu 1 301 -11 1815 178 0 10 chr17 21572459 21572757 -67931796 + AluJo SINE Alu 1 295 -17 202 239 28 56 chr17 21573050 21573121 -67931432 + MER5B DNA MER1_type 50 118 -60 392 306 98 16 chr17 21573379 21573572 -67930981 + L2 LINE L2 3102 3310 -3 1458 130 8 71 chr17 21573600 21573666 -67930887 + AluSq SINE Alu 61 130 -178 252 0 0 0 chr17 21573666 21573694 -67930859 + (CA)n Simple_repeat Simple_repeat 2 29 0 1458 130 8 71 chr17 21573694 21573890 -67930663 + AluSq SINE Alu 130 308 0 209 217 29 58 chr17 21574084 21574153 -67930400 + MER5B DNA MER1_type 50 116 -62 2386 95 0 13 chr17 21574478 21574783 -67929770 - AluSx SINE Alu -11 301 1 508 308 100 54 chr17 21574792 21574933 -67929620 - L1ME4a LINE L1 -5 6116 5983 1739 175 13 7 chr17 21574933 21575241 -67929312 - AluJo SINE Alu -2 310 1 508 308 100 54 chr17 21575241 21575430 -67929123 - L1ME4a LINE L1 -138 5983 5771 2236 90 45 0 chr17 21576217 21576506 -67928047 - AluSg SINE Alu -8 302 1 2060 138 0 25 chr17 21576517 21576835 -67927718 - AluSx SINE Alu -2 310 1 747 213 0 18 chr17 21576837 21577001 -67927552 - FRAM SINE Alu -5 161 1 309 344 38 0 chr17 21577023 21577180 -67927373 + MIR SINE MIR 88 250 -12 397 240 61 87 chr17 21577211 21577440 -67927113 - L1ME4a LINE L1 -382 5739 5517 2060 157 93 21 chr17 21578430 21578755 -67925798 - LTR47A LTR ERVL -1 451 88 2488 63 10 3 chr17 21578755 21579056 -67925497 - AluSq SINE Alu -9 304 2 2060 157 93 21 chr17 21579056 21579151 -67925402 - LTR47A LTR ERVL -364 88 1 219 336 47 35 chr17 21579154 21579424 -67925129 - L2 LINE L2 -23 3249 2907 757 181 145 108 chr17 21579462 21579712 -67924841 - MLT1C LTR MaLR -185 205 2 257 271 0 0 chr17 21579814 21579873 -67924680 + L2 LINE L2 2531 2589 -725 260 189 19 19 chr17 21580144 21580197 -67924356 + L2 LINE L2 3171 3223 -90 193 211 88 0 chr17 21580443 21580500 -67924053 + MIR SINE MIR 78 139 -69 308 268 72 0 chr17 21580580 21580677 -67923876 - MIR SINE MIR -70 192 89 3186 86 12 7 chr17 21580702 21581134 -67923419 + MER1A DNA MER1_type 96 529 0 289 278 44 11 chr17 21581141 21581231 -67923322 - MIR SINE MIR -168 94 2 245 246 49 84 chr17 21581464 21581606 -67922947 - L1MC4 LINE L1 -142 7900 7764 2223 107 0 0 chr17 21582153 21582456 -67922097 + AluSg SINE Alu 3 305 0 219 326 32 21 chr17 21583027 21583122 -67921431 - MIR SINE MIR -112 150 55 2043 139 7 19 chr17 21583450 21583760 -67920793 - AluSx SINE Alu -6 306 1 1979 103 0 97 chr17 21585646 21585975 -67918578 - AluSx SINE Alu -15 297 1 2165 119 3 0 chr17 21586410 21586705 -67917848 - AluSq SINE Alu -16 297 2 2221 77 49 7 chr17 21587483 21587769 -67916784 - AluSc SINE Alu -11 298 1 200 0 100 0 chr17 21588863 21588893 -67915660 + T-rich Low_complexity Low_complexity 3 35 0 2336 112 0 0 chr17 21588905 21589217 -67915336 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 21589675 21589696 -67914857 + AT_rich Low_complexity Low_complexity 1 21 0 622 215 0 0 chr17 21589696 21589817 -67914736 + 7SLRNA srpRNA srpRNA 200 320 0 38 0 0 0 chr17 21589824 21589862 -67914691 + AT_rich Low_complexity Low_complexity 1 38 0 302 263 50 40 chr17 21589976 21590075 -67914478 + L1ME4a LINE L1 6016 6115 -6 329 296 25 50 chr17 21590675 21590834 -67913719 + MIR SINE MIR 102 256 -6 2025 159 88 14 chr17 21593806 21593831 -67910722 - L1MB7 LINE L1 -20 6164 6142 2150 112 20 0 chr17 21593831 21594126 -67910427 - AluSx SINE Alu -11 301 1 2025 159 88 14 chr17 21594126 21594522 -67910031 - L1MB7 LINE L1 -42 6142 5712 364 271 66 26 chr17 21594527 21594678 -67909875 - Charlie8 DNA MER1_type -2259 158 2 278 260 130 42 chr17 21594881 21595073 -67909480 - L1ME4a LINE L1 -81 6040 5832 2497 77 0 10 chr17 21596609 21596921 -67907632 + AluSc SINE Alu 1 309 0 2179 116 7 3 chr17 21597279 21597572 -67906981 + AluSx SINE Alu 1 294 -18 2223 95 0 36 chr17 21597689 21597995 -67906558 - AluSg SINE Alu -15 295 1 2157 109 17 0 chr17 21598000 21598294 -67906259 - AluSq SINE Alu 0 313 15 512 229 90 24 chr17 21598858 21599024 -67905529 + MER5B DNA MER1_type 1 177 -1 206 358 92 17 chr17 21599277 21599397 -67905156 - L2 LINE L2 -5 3308 3180 1433 149 0 0 chr17 21600903 21601124 -67903429 + AluJo SINE Alu 81 301 -11 713 286 56 44 chr17 21601744 21602355 -67902198 + L1ME3A LINE L1 1292 2012 -4516 * 2140 269 106 64 chr17 21602350 21602714 -67901839 + L1ME3A LINE L1 2842 3189 -3237 2069 113 3 0 chr17 21602714 21602998 -67901555 - AluSp SINE Alu -28 285 1 2140 269 106 64 chr17 21602998 21604767 -67899786 + L1ME3A LINE L1 3189 5072 -1354 2448 65 0 3 chr17 21604767 21605074 -67899479 + AluY SINE Alu 1 306 -5 2140 269 106 64 chr17 21605074 21605124 -67899429 + L1ME3A LINE L1 5072 5118 -1308 735 280 79 27 chr17 21605233 21605757 -67898796 + L1ME3A LINE L1 5602 6222 -228 1703 147 11 11 chr17 21605762 21606048 -67898505 + AluJb SINE Alu 6 291 -21 221 267 0 17 chr17 21606051 21606111 -67898442 + (CATATA)n Simple_repeat Simple_repeat 4 62 0 1402 129 4 33 chr17 21609085 21609325 -67895228 + AluJo SINE Alu 6 238 -74 215 0 67 0 chr17 21609358 21609388 -67895165 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 510 258 19 7 chr17 21609546 21609701 -67894852 - L1ME LINE L1 -371 5750 5594 272 354 37 19 chr17 21611002 21611163 -67893390 + L2 LINE L2 2887 3050 -222 229 228 30 129 chr17 21611805 21611906 -67892647 + MER103 DNA DNA 16 106 -60 318 256 26 60 chr17 21612020 21612137 -67892416 + MIR SINE MIR 35 147 -115 * 319 258 25 67 chr17 21612135 21612255 -67892298 - L2 LINE L2 0 3272 3158 262 291 149 46 chr17 21616033 21616315 -67888238 - MLT1J2 LTR MaLR -139 311 1 585 287 207 0 chr17 21616982 21617306 -67887247 + MLT1G1 LTR MaLR 205 595 0 419 259 42 0 chr17 21618147 21618290 -67886263 - MLT1J1 LTR MaLR -277 169 21 1091 77 0 0 chr17 21618530 21618673 -67885880 - AluSg/x SINE Alu -21 291 149 1459 112 0 43 chr17 21618673 21618906 -67885647 + AluSg/x SINE Alu 84 306 -6 227 255 27 40 chr17 21619061 21619210 -67885343 + L1MC5 LINE L1 7782 7928 -33 388 291 178 21 chr17 21619817 21620199 -67884354 - L2 LINE L2 -2157 1157 716 401 243 178 30 chr17 21620200 21620402 -67884151 - L2 LINE L2 -2854 460 229 234 191 0 0 chr17 21621622 21621664 -67882889 + MIR SINE MIR 112 153 -109 183 312 13 39 chr17 21623014 21623091 -67881462 + MIR SINE MIR 111 185 -77 228 341 11 11 chr17 21623394 21623482 -67881071 - L2 LINE L2 -573 2741 2654 424 215 125 69 chr17 21623482 21623626 -67880927 + MLT1D LTR MaLR 5 156 -349 737 206 96 27 chr17 21623645 21623864 -67880689 + MLT1D LTR MaLR 272 505 0 245 248 97 76 chr17 21624729 21624965 -67879588 + L2 LINE L2 2794 3042 -271 272 244 39 5 chr17 21626581 21626677 -67877876 + MIR SINE MIR 90 254 -8 1187 310 158 25 chr17 21626805 21627444 -67877109 - L1ME3A LINE L1 -219 6020 5217 2016 123 13 28 chr17 21627444 21627761 -67876792 - AluJo SINE Alu 0 312 1 1187 310 158 25 chr17 21627761 21628053 -67876500 - L1ME3A LINE L1 -1022 5217 4965 1228 54 0 0 chr17 21628056 21628205 -67876348 + AluY SINE Alu 147 295 -16 1447 132 4 18 chr17 21628208 21628343 -67876210 + AluSx SINE Alu 1 133 -179 2194 110 10 0 chr17 21628343 21628651 -67875902 + AluSx SINE Alu 1 311 -1 1447 132 4 18 chr17 21628651 21628743 -67875810 + AluSx SINE Alu 133 225 -87 1529 233 106 97 chr17 21628750 21628914 -67875639 - L1ME3A LINE L1 -2089 4126 3965 2203 115 0 0 chr17 21628914 21629219 -67875334 - AluSx SINE Alu -7 305 1 1529 233 106 97 chr17 21629219 21629253 -67875300 - L1ME3A LINE L1 -2250 3965 3933 589 144 183 0 chr17 21629253 21629357 -67875196 - FLAM_C SINE Alu -10 123 1 1529 233 106 97 chr17 21629357 21629957 -67874596 - L1ME3A LINE L1 -2282 3933 3340 1905 171 0 0 chr17 21629957 21630266 -67874287 - AluJo SINE Alu -3 309 1 1529 233 106 97 chr17 21630266 21630428 -67874125 - L1ME3A LINE L1 -2875 3340 3181 1881 118 3 57 chr17 21630428 21630595 -67873958 - AluSq SINE Alu -15 298 154 2170 76 55 0 chr17 21630595 21630886 -67873667 - AluSp SINE Alu -6 307 1 1881 118 3 57 chr17 21630886 21631033 -67873520 - AluSq SINE Alu -159 154 1 2072 121 7 3 chr17 21631033 21631339 -67873214 - AluSg SINE Alu -3 307 1 1529 233 106 97 chr17 21631339 21631376 -67873177 - L1ME3A LINE L1 -3033 3182 3116 1955 117 7 17 chr17 21631521 21631821 -67872732 + AluSq SINE Alu 1 297 -16 2172 108 3 6 chr17 21631824 21632138 -67872415 + AluSp SINE Alu 1 313 0 650 210 36 31 chr17 21632153 21632377 -67872176 - L1ME3A LINE L1 -3140 3075 2851 344 205 24 12 chr17 21632604 21632687 -67871866 - L1ME2 LINE L1 -10 6154 6071 517 248 133 39 chr17 21632687 21632713 -67871840 - L1ME3A LINE L1 -4930 1466 1444 2215 103 0 3 chr17 21632713 21633014 -67871539 + AluSg1 SINE Alu 1 300 -9 517 248 133 39 chr17 21633014 21633394 -67871159 - L1ME3A LINE L1 -4952 1444 1022 1698 153 20 7 chr17 21633412 21633712 -67870841 + AluSx SINE Alu 1 304 -8 2341 61 0 17 chr17 21633714 21634010 -67870543 + AluY SINE Alu 1 291 -20 1910 163 0 0 chr17 21634258 21634558 -67869995 - AluJb SINE Alu -12 300 1 3295 253 131 22 chr17 21636323 21637883 -67866670 + L2 LINE L2 1537 3261 -52 304 175 0 0 chr17 21637908 21637965 -67866588 - MIR SINE MIR -109 153 97 504 292 161 25 chr17 21638749 21639023 -67865530 + L2 LINE L2 2924 3234 -38 3276 98 44 6 chr17 21639049 21639527 -67865026 + MER1A DNA MER1_type 34 529 0 25 0 0 0 chr17 21639901 21639926 -67864627 + AT_rich Low_complexity Low_complexity 1 25 0 254 231 0 0 chr17 21640021 21640073 -67864480 + MIR SINE MIR 124 175 -87 224 286 0 71 chr17 21641396 21641480 -67863073 - MIR3 SINE MIR -22 186 109 243 207 308 5 chr17 21641629 21641756 -67862797 - MIR SINE MIR -58 150 1 373 157 255 10 chr17 21643889 21643991 -67860562 + MIR SINE MIR 81 207 -55 22 0 0 0 chr17 21644013 21644035 -67860518 + AT_rich Low_complexity Low_complexity 1 22 0 265 318 45 8 chr17 21644106 21644238 -67860315 + L2 LINE L2 2914 3050 -222 235 300 22 11 chr17 21644284 21644374 -67860179 - L3 LINE CR1 -95 1482 1392 465 242 68 8 chr17 21644672 21644819 -67859734 - MIR SINE MIR -55 153 28 1148 180 57 2 chr17 21645054 21645403 -67859150 - LTR47A LTR ERVL -8 444 1 261 172 11 97 chr17 21645443 21645474 -67859079 - L1MB5 LINE L1 -9 6165 6133 2340 85 0 0 chr17 21645474 21645779 -67858774 - AluSq SINE Alu -8 305 1 261 172 11 97 chr17 21645779 21645840 -67858713 - L1MB5 LINE L1 -41 6133 6081 227 344 45 26 chr17 21645840 21645994 -67858559 + L2 LINE L2 2942 3098 -174 318 359 14 0 chr17 21646286 21646428 -67858125 + MIR3 SINE MIR 23 166 -42 420 215 48 39 chr17 21646560 21646695 -67857858 + MIR SINE MIR 38 173 -62 1306 150 29 20 chr17 21646830 21647076 -67857477 + AluJo SINE Alu 1 248 -64 460 313 42 38 chr17 21647212 21647474 -67857079 - L2 LINE L2 -140 3173 2911 681 200 17 74 chr17 21647494 21647669 -67856884 - MER63B DNA MER1_type -271 165 1 214 262 12 36 chr17 21647671 21647755 -67856798 - L2 LINE L2 -464 2850 2769 235 111 0 0 chr17 21647826 21647862 -67856691 + MER53 DNA DNA 1 36 -153 * 435 138 11 46 chr17 21647861 21647948 -67856605 - MER53 DNA DNA -83 106 23 * 504 92 11 46 chr17 21647873 21647960 -67856593 + MER53 DNA DNA 106 189 0 266 214 214 17 chr17 21648311 21648428 -67856125 - L2 LINE L2 -502 2812 2673 200 306 5 48 chr17 21649336 21649522 -67855031 + (TG)n Simple_repeat Simple_repeat 2 179 0 300 180 105 22 chr17 21649619 21649721 -67854832 - MIR SINE MIR -61 147 34 258 327 37 9 chr17 21650368 21650475 -67854078 - MIR SINE MIR -35 227 118 208 312 225 12 chr17 21650516 21650862 -67853691 + L2 LINE L2 2804 3223 -49 413 304 170 9 chr17 21651078 21651308 -67853245 + MLT1K LTR MaLR 7 273 -315 2005 114 26 23 chr17 21651551 21651857 -67852696 - AluSx SINE Alu -5 307 1 1047 83 0 0 chr17 21651857 21651989 -67852564 - AluSq/x SINE Alu -177 136 5 280 295 54 0 chr17 21652217 21652329 -67852224 - Charlie8 DNA MER1_type -1926 491 374 482 279 197 0 chr17 21652409 21652592 -67851961 - Charlie8 DNA MER1_type -2152 265 47 845 276 63 11 chr17 21652594 21652880 -67851673 + L1MC/D LINE L1 5522 5822 -1986 3924 131 66 84 chr17 21652884 21653182 -67851371 + L1MB7 LINE L1 5088 5390 -794 1880 162 7 0 chr17 21653182 21653472 -67851081 + AluSx SINE Alu 9 300 -12 3924 131 66 84 chr17 21653472 21653642 -67850911 + L1MB7 LINE L1 5390 5561 -623 1774 139 57 0 chr17 21653642 21653922 -67850631 + AluSx SINE Alu 1 296 -16 3924 131 66 84 chr17 21653922 21654404 -67850149 + L1MB7 LINE L1 5561 6011 -173 3006 120 61 113 chr17 21654404 21654657 -67849896 + MER4B LTR ERV1 1 266 -344 1600 87 39 97 chr17 21654657 21655003 -67849550 + AluSx SINE Alu 1 312 0 3006 120 61 113 chr17 21655003 21655393 -67849160 + MER4B LTR ERV1 266 610 0 3924 131 66 84 chr17 21655393 21655531 -67849022 + L1MB7 LINE L1 6011 6150 -34 180 188 0 0 chr17 21655808 21655840 -67848713 + L2 LINE L2 3281 3312 -1 426 348 76 0 chr17 21657651 21657835 -67846718 + MIR SINE MIR 64 261 -1 237 260 29 29 chr17 21658285 21658316 -67846237 - MIR3 SINE MIR -18 190 160 553 275 42 16 chr17 21658316 21658505 -67846048 - MER117 DNA MER1_type -3 194 1 237 260 29 29 chr17 21658505 21658577 -67845976 - MIR3 SINE MIR -47 161 87 213 291 0 64 chr17 21659984 21660094 -67844459 + G-rich Low_complexity Low_complexity 1 103 0 218 213 0 13 chr17 21660180 21660255 -67844298 + (CCCCAG)n Simple_repeat Simple_repeat 2 75 0 26 30 0 0 chr17 21661602 21661635 -67842918 + AT_rich Low_complexity Low_complexity 1 33 0 307 139 155 0 chr17 21663888 21663979 -67840574 + MIR SINE MIR 77 196 -66 2096 110 0 10 chr17 21663987 21664288 -67840265 + AluSx SINE Alu 1 298 -14 314 219 157 0 chr17 21664347 21664468 -67840085 - MIR SINE MIR -62 146 8 243 387 73 8 chr17 21666190 21666438 -67838115 + L2 LINE L2 2636 2899 -415 264 327 84 0 chr17 21666472 21666579 -67837974 + L2 LINE L2 3127 3242 -30 1309 144 95 23 chr17 21666637 21666900 -67837653 - AluJo SINE Alu -30 282 1 203 293 69 0 chr17 21666901 21666959 -67837594 - L2 LINE L2 -13 3300 3239 967 262 27 0 chr17 21667198 21667419 -67837134 + MIR SINE MIR 32 258 -4 1259 237 159 34 chr17 21667490 21667937 -67836616 + MLT1J LTR MaLR 1 503 -8 386 320 92 40 chr17 21668352 21668602 -67835951 + LTR67 LTR ERVL 14 276 -281 795 301 158 8 chr17 21669108 21669470 -67835083 + LTR33 LTR ERVL 106 521 0 1263 220 108 74 chr17 21669710 21670210 -67834343 + LTR33 LTR ERVL 1 517 -4 687 216 20 0 chr17 21670731 21670879 -67833674 - MLT1B LTR MaLR -239 151 1 413 242 168 11 chr17 21671519 21671709 -67832844 - HAL1 LINE L1 -1107 1400 1181 * 4050 167 31 32 chr17 21671703 21672408 -67832145 - L1MC2 LINE L1 -303 6435 5713 1871 148 3 0 chr17 21672408 21672699 -67831854 - AluJb SINE Alu -17 295 4 4050 167 31 32 chr17 21672699 21673042 -67831511 - L1MC2 LINE L1 -1025 5713 5371 2459 221 27 30 chr17 21673067 21673275 -67831278 - L1MC2 LINE L1 -1886 4654 4447 1059 157 0 0 chr17 21673275 21673434 -67831119 + FRAM SINE Alu 1 159 -7 2459 221 27 30 chr17 21673434 21673899 -67830654 - L1MC2 LINE L1 -2093 4447 3983 825 234 0 0 chr17 21673910 21674085 -67830468 - AluJb SINE Alu -1 311 137 268 235 0 0 chr17 21674088 21674156 -67830397 - L1MC2 LINE L1 -2569 3971 3904 * 2955 189 40 43 chr17 21674139 21674367 -67830186 - L1MC2 LINE L1 -4660 1880 1653 2273 66 0 54 chr17 21674367 21674684 -67829869 - AluY SINE Alu -11 300 1 2955 189 40 43 chr17 21674684 21675332 -67829221 - L1MC2 LINE L1 -4887 1653 1007 1183 127 0 0 chr17 21675332 21675531 -67829022 - AluSx SINE Alu 0 314 116 358 91 152 0 chr17 21675531 21675597 -67828956 + MADE1 DNA Mariner 5 80 0 774 175 0 0 chr17 21675597 21675717 -67828836 - AluSx SINE Alu -192 121 2 3109 217 58 8 chr17 21675733 21676446 -67828107 - L1MC2 LINE L1 -5774 766 19 225 360 0 0 chr17 21676559 21676645 -67827908 - L2 LINE L2 -584 2730 2645 296 223 125 27 chr17 21677128 21677283 -67827270 + MIR SINE MIR 91 262 0 2225 95 7 0 chr17 21677533 21677837 -67826716 + AluSg SINE Alu 1 306 -4 246 238 110 43 chr17 21677842 21678025 -67826528 - MIR SINE MIR -8 254 23 248 202 37 138 chr17 21678768 21678877 -67825676 + MIR SINE MIR 91 188 -74 1078 148 0 16 chr17 21678890 21679059 -67825494 + AluSc SINE Alu 130 297 -12 2395 84 0 0 chr17 21679059 21679369 -67825184 + AluSg SINE Alu 1 310 0 1078 148 0 16 chr17 21679369 21679381 -67825172 + AluSc SINE Alu 297 308 -1 335 281 177 37 chr17 21679702 21680095 -67824458 + L2 LINE L2 2658 3091 -181 1456 124 49 17 chr17 21680192 21680626 -67823927 - LTR54 LTR ERV1 0 510 1 234 268 209 43 chr17 21680920 21681106 -67823447 + MIR SINE MIR 30 257 -5 502 258 139 88 chr17 21681594 21681924 -67822629 + L2 LINE L2 2926 3272 0 368 301 19 0 chr17 21681924 21682080 -67822473 + (TGGA)n Simple_repeat Simple_repeat 2 160 0 180 252 18 9 chr17 21682080 21682111 -67822442 + (TGAA)n Simple_repeat Simple_repeat 2 31 -82 2009 120 0 69 chr17 21682111 21682445 -67822108 + AluSx SINE Alu 1 311 -1 180 252 18 9 chr17 21682445 21682524 -67822029 + (TGAA)n Simple_repeat Simple_repeat 31 113 0 315 264 23 0 chr17 21682546 21682633 -67821920 + (TGGA)n Simple_repeat Simple_repeat 3 91 0 1718 154 137 20 chr17 21682649 21682999 -67821554 + MSTD LTR MaLR 5 395 -1 373 252 59 7 chr17 21683093 21683228 -67821325 - MIR3 SINE MIR -31 177 36 953 211 34 5 chr17 21683376 21683584 -67820969 + MIR SINE MIR 12 225 -37 278 306 0 0 chr17 21683685 21683783 -67820770 + (TG)n Simple_repeat Simple_repeat 1 98 0 204 200 0 0 chr17 21683940 21683985 -67820568 + (TG)n Simple_repeat Simple_repeat 1 45 0 1478 160 101 0 chr17 21685053 21685203 -67819350 - AluJb SINE Alu -17 295 162 420 20 0 0 chr17 21685203 21685252 -67819301 + (TG)n Simple_repeat Simple_repeat 2 50 0 1478 160 101 0 chr17 21685252 21685369 -67819184 - AluJb SINE Alu -150 162 1 438 209 11 0 chr17 21685394 21685485 -67819068 + L2 LINE L2 3178 3269 -3 226 200 36 0 chr17 21685982 21686037 -67818516 + L2 LINE L2 2637 2693 -621 976 295 113 13 chr17 21686041 21686583 -67817970 + MER45C DNA AcHobo 3 633 -320 1668 173 0 7 chr17 21686630 21686937 -67817616 + AluJb SINE Alu 1 305 0 2085 104 10 0 chr17 21686941 21687258 -67817295 + AluSp SINE Alu 1 313 0 221 337 36 0 chr17 21687644 21687727 -67816826 + L2 LINE L2 3209 3294 -19 212 367 92 0 chr17 21687770 21687879 -67816674 - MIR SINE MIR -74 134 16 236 209 0 0 chr17 21688953 21688996 -67815557 + L2 LINE L2 3230 3272 0 208 214 54 0 chr17 21689170 21689226 -67815327 + CT-rich Low_complexity Low_complexity 5 63 0 208 282 0 58 chr17 21689951 21690054 -67814499 + L3 LINE CR1 1304 1400 -177 416 327 65 9 chr17 21690205 21690422 -67814131 - MIR SINE MIR -32 230 2 228 348 123 14 chr17 21695921 21696059 -67808494 - MIR3 SINE MIR -54 154 2 363 367 58 9 chr17 21696594 21696820 -67807733 - MIR SINE MIR -4 258 22 238 319 30 74 chr17 21697094 21697229 -67807324 + MLT1J2 LTR MaLR 266 394 -56 1910 243 78 37 chr17 21697438 21697819 -67806734 - MER67C LTR ERV1 0 710 287 2187 93 0 3 chr17 21697819 21698110 -67806443 + AluSg SINE Alu 1 290 -20 1910 243 78 37 chr17 21698110 21698410 -67806143 - MER67C LTR ERV1 -423 287 1 2002 86 0 7 chr17 21698431 21698711 -67805842 - AluY SINE Alu -8 303 26 304 28 0 0 chr17 21698729 21698765 -67805788 + (TTTA)n Simple_repeat Simple_repeat 2 120 0 2201 71 7 0 chr17 21698765 21699045 -67805508 - AluY SINE Alu -29 282 1 1896 149 32 18 chr17 21699155 21699497 -67805056 - MLT1A1 LTR MaLR -9 356 10 2244 104 3 0 chr17 21699802 21700109 -67804444 - AluSp SINE Alu -5 308 1 1943 85 0 39 chr17 21700662 21700772 -67803781 + AluSq SINE Alu 34 147 -166 2048 103 0 3 chr17 21700772 21701054 -67803499 + AluSc SINE Alu 15 295 -14 1943 85 0 39 chr17 21701054 21701224 -67803329 + AluSq SINE Alu 147 303 -10 1996 132 0 0 chr17 21702517 21702820 -67801733 + AluSx SINE Alu 1 303 -9 803 186 23 17 chr17 21702975 21703147 -67801406 - AluJb SINE Alu -3 309 137 2441 149 41 43 chr17 21703441 21703952 -67800601 - LTR54 LTR ERV1 0 510 1 2308 131 50 69 chr17 21704025 21704461 -67800092 - MSTA LTR MaLR 0 428 1 3543 134 31 22 chr17 21704667 21705215 -67799338 - LTR49 LTR ERV1 -2 593 38 2170 76 28 0 chr17 21705215 21705341 -67799212 + AluY SINE Alu 1 122 -189 381 43 0 0 chr17 21705341 21705388 -67799165 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 2170 76 28 0 chr17 21705388 21705549 -67799004 + AluY SINE Alu 122 296 -15 3543 134 31 22 chr17 21705549 21705588 -67798965 - LTR49 LTR ERV1 -557 38 1 1227 145 17 54 chr17 21705610 21705645 -67798908 - LTR49-int LTR ERV1 -15 6316 6281 1843 142 7 7 chr17 21705645 21705941 -67798612 + AluSx SINE Alu 1 296 -16 1227 145 17 54 chr17 21705941 21706146 -67798407 - LTR49-int LTR ERV1 -50 6281 6085 1736 126 0 4 chr17 21706152 21706407 -67798146 - AluSx SINE Alu -58 254 1 1858 108 10 6 chr17 21706407 21706802 -67797751 - LTR49-int LTR ERV1 -391 5940 5501 1139 139 0 16 chr17 21706814 21707001 -67797552 + AluSg/x SINE Alu 127 310 0 3848 197 64 60 chr17 21707001 21707063 -67797490 - LTR49-int LTR ERV1 -3805 2526 2466 2018 120 0 13 chr17 21707063 21707363 -67797190 - AluSq SINE Alu -17 296 1 3848 197 64 60 chr17 21707363 21707428 -67797125 - LTR49-int LTR ERV1 -3865 2466 2403 2231 71 27 0 chr17 21707428 21707723 -67796830 - AluSp SINE Alu -10 303 1 3848 197 64 60 chr17 21707723 21708282 -67796271 - LTR49-int LTR ERV1 -3928 2403 1848 1980 103 65 0 chr17 21708282 21708574 -67795979 + AluSx SINE Alu 1 311 -1 3848 197 64 60 chr17 21708574 21708676 -67795877 - LTR49-int LTR ERV1 -4483 1848 1748 325 70 35 0 chr17 21708676 21708733 -67795820 + (CA)n Simple_repeat Simple_repeat 2 60 0 3848 197 64 60 chr17 21708733 21708955 -67795598 - LTR49-int LTR ERV1 -4583 1748 1509 2104 137 12 63 chr17 21708956 21709182 -67795371 - LTR49-int LTR ERV1 -4989 1342 1145 1941 132 3 0 chr17 21709182 21709470 -67795083 - AluSx SINE Alu -21 291 3 2104 137 12 63 chr17 21709470 21709658 -67794895 - LTR49-int LTR ERV1 -5186 1145 949 1564 114 76 15 chr17 21709655 21709919 -67794634 - LTR49-int LTR ERV1 -6030 301 22 * 277 279 130 48 chr17 21710032 21710151 -67794402 + LTR34 LTR ERV1 274 382 -317 3262 112 93 35 chr17 21710151 21710275 -67794278 - LTR24C LTR ERV1 0 635 520 2051 89 3 14 chr17 21710275 21710568 -67793985 + AluSc SINE Alu 1 290 -19 3262 112 93 35 chr17 21710568 21711043 -67793510 - LTR24C LTR ERV1 -115 520 1 277 279 130 48 chr17 21711043 21711131 -67793422 + LTR34 LTR ERV1 382 498 -201 3083 164 53 6 chr17 21711336 21711902 -67792651 - LTR49 LTR ERV1 -2 651 1 3664 184 56 54 chr17 21711909 21712766 -67791787 + MER21B LTR ERV1 3 861 -2 4615 98 29 5 chr17 21712918 21713147 -67791406 + PABL_B LTR ERV1 1 223 -444 1933 136 3 10 chr17 21713147 21713448 -67791105 - AluSx SINE Alu -13 299 1 4615 98 29 5 chr17 21713448 21713466 -67791087 + PABL_B LTR ERV1 223 239 -428 2331 90 0 3 chr17 21713466 21713776 -67790777 - AluSq SINE Alu -4 309 1 4615 98 29 5 chr17 21713776 21714178 -67790375 + PABL_B LTR ERV1 239 667 0 1912 152 7 0 chr17 21714291 21714593 -67789960 + AluSx SINE Alu 1 304 -8 2144 145 87 79 chr17 21714685 21715190 -67789363 + LTR54 LTR ERV1 1 509 -1 1409 130 5 9 chr17 21715481 21715697 -67788856 + MER4D LTR ERV1 1 215 -688 1186 118 0 22 chr17 21715698 21715876 -67788677 - AluSg/x SINE Alu -16 296 123 3949 137 56 21 chr17 21715876 21716366 -67788187 + MER4D LTR ERV1 206 728 -175 2071 120 0 0 chr17 21716366 21716650 -67787903 - AluSg SINE Alu -26 284 1 3949 137 56 21 chr17 21716650 21716833 -67787720 + MER4D LTR ERV1 728 903 0 1438 233 51 24 chr17 21717654 21718207 -67786346 - L1MDa LINE L1 -3451 2931 2364 247 277 47 64 chr17 21718269 21718504 -67786049 - L1MDa LINE L1 -4862 1520 1290 2141 138 151 0 chr17 21718525 21718895 -67785658 + MSTA LTR MaLR 3 428 0 9386 162 29 14 chr17 21718895 21718941 -67785612 + MSTA-int LTR MaLR 1 45 -1606 6519 79 7 52 chr17 21718941 21720679 -67783874 + SVA Other Other 2 1385 -1 9386 162 29 14 chr17 21720679 21722256 -67782297 + MSTA-int LTR MaLR 45 1651 0 2198 119 132 26 chr17 21722256 21722570 -67781983 + MSTA LTR MaLR 1 365 -63 2227 105 3 0 chr17 21722570 21722874 -67781679 - AluSq SINE Alu -8 305 1 2198 119 132 26 chr17 21722874 21722946 -67781607 + MSTA LTR MaLR 365 428 0 310 284 12 12 chr17 21723011 21723173 -67781380 - L1MDa LINE L1 -5423 1140 979 1414 117 8 17 chr17 21723179 21723419 -67781134 - L1MB3 LINE L1 0 6183 5946 1950 226 80 42 chr17 21723466 21724172 -67780381 - L1M4 LINE L1 -4521 1792 993 766 216 26 71 chr17 21725131 21725399 -67779154 - L1M3e LINE L1 -4957 2073 1818 905 331 73 17 chr17 21725803 21726211 -67778342 - L1M3e LINE L1 -5710 1327 897 1593 153 112 70 chr17 21726331 21726555 -67777998 - MSTB1 LTR MaLR -12 420 172 1166 179 75 101 chr17 21726555 21726863 -67777690 - AluJo SINE Alu -2 300 1 1593 153 112 70 chr17 21726863 21727023 -67777530 - MSTB1 LTR MaLR -260 172 20 1810 232 9 27 chr17 21727059 21727508 -67777045 + LTR47B LTR ERVL 1 441 -2 1935 183 55 48 chr17 21727655 21728113 -67776440 + MLT1C LTR MaLR 1 461 -6 279 335 1 0 chr17 21728155 21728268 -67776285 + L1ME LINE L1 5481 5594 -527 1914 96 59 40 chr17 21728583 21728886 -67775667 + AluSg SINE Alu 1 309 -1 2250 109 0 3 chr17 21728893 21729206 -67775347 + AluSx SINE Alu 1 312 0 1433 203 17 3 chr17 21729545 21729661 -67774892 + AluJo SINE Alu 1 114 -198 216 0 0 0 chr17 21729661 21729685 -67774868 + (CTA)n Simple_repeat Simple_repeat 1 24 0 1433 203 17 3 chr17 21729685 21729868 -67774685 + AluJo SINE Alu 114 304 -8 2102 72 7 4 chr17 21729948 21730284 -67774269 - AluY SINE Alu 0 338 2 2200 144 70 15 chr17 21731061 21731463 -67773090 + MSTB LTR MaLR 3 426 0 795 131 48 136 chr17 21732435 21732652 -67771901 + LTR34 LTR ERV1 1 198 -390 544 166 194 22 chr17 21732673 21732812 -67771741 - MER4C LTR ERV1 0 465 303 1889 122 21 77 chr17 21732881 21733259 -67771294 - MER4A LTR ERV1 -307 357 1 2685 145 42 14 chr17 21733278 21733760 -67770793 + LTR34 LTR ERV1 205 699 0 4213 114 34 50 chr17 21733842 21733978 -67770575 - LTR8A LTR ERV1 0 727 590 2013 118 0 22 chr17 21733978 21734291 -67770262 + AluSx SINE Alu 1 306 -6 4213 114 34 50 chr17 21734291 21734893 -67769660 - LTR8A LTR ERV1 -137 590 1 1213 222 4 4 chr17 21734998 21735237 -67769316 - MER8 DNA MER2_type 0 239 1 2106 106 8 98 chr17 21735267 21735653 -67768900 - MER4B LTR ERV1 -259 351 1 2198 92 10 0 chr17 21735745 21736038 -67768515 - AluSx SINE Alu -16 296 1 2346 74 26 3 chr17 21736593 21736983 -67767570 - LTR7 LTR ERV1 -7 443 1 5280 108 14 14 chr17 21737150 21737929 -67766624 + MER4E LTR ERV1 1 779 0 1807 141 25 0 chr17 21738369 21738653 -67765900 - AluJo SINE Alu -16 296 6 219 361 52 10 chr17 21739058 21739155 -67765398 + MIR SINE MIR 48 148 -114 3068 161 56 192 chr17 21739282 21740294 -67764259 + MSTB-int LTR MaLR 397 1271 -309 1025 162 0 22 chr17 21740294 21740473 -67764080 - AluJb SINE Alu 0 312 138 532 132 60 6 chr17 21740475 21740642 -67763911 + (TA)n Simple_repeat Simple_repeat 1 176 0 771 185 0 0 chr17 21740642 21740761 -67763792 - FLAM_C SINE Alu -23 120 2 1930 123 14 80 chr17 21740762 21741029 -67763524 + MSTB-int LTR MaLR 1325 1565 -86 1863 144 3 0 chr17 21741029 21741321 -67763232 + AluSx SINE Alu 1 293 -19 1930 123 14 80 chr17 21741321 21741403 -67763150 + MSTB-int LTR MaLR 1565 1651 0 2113 153 79 27 chr17 21741403 21741752 -67762801 + MSTB LTR MaLR 1 375 -51 427 136 12 25 chr17 21741752 21741833 -67762720 - MADE1 DNA Mariner 0 80 1 2113 153 79 27 chr17 21741833 21741888 -67762665 + MSTB LTR MaLR 375 426 0 2277 102 0 0 chr17 21741988 21742292 -67762261 + AluSp SINE Alu 2 305 -8 931 251 95 3 chr17 21742658 21742953 -67761600 - L1ME2 LINE L1 -171 5993 5672 2045 101 18 0 chr17 21743283 21743569 -67760984 + AluSx SINE Alu 1 291 -21 1228 167 67 106 chr17 21743632 21744093 -67760460 - LTR47B LTR ERVL 0 443 1 1624 174 17 53 chr17 21744348 21744438 -67760115 - MER74A LTR ERVL 0 558 466 1948 126 3 13 chr17 21744438 21744740 -67759813 + AluSq SINE Alu 5 303 -10 1624 174 17 53 chr17 21744740 21744751 -67759802 - MER74A LTR ERVL -92 466 456 1571 132 83 31 chr17 21744751 21745040 -67759513 + AluJb SINE Alu 1 304 -8 1624 174 17 53 chr17 21745040 21745293 -67759260 - MER74A LTR ERVL -102 456 216 2331 74 0 0 chr17 21745793 21746090 -67758463 - AluSg SINE Alu -13 297 1 1908 118 54 0 chr17 21746093 21746372 -67758181 - AluSx SINE Alu -18 294 1 1510 128 23 122 chr17 21746372 21746716 -67757837 - AluYb8 SINE Alu -7 311 1 828 121 0 32 chr17 21746719 21746843 -67757710 - AluSq/x SINE Alu -180 133 14 2062 94 10 26 chr17 21746958 21747267 -67757286 + AluSc SINE Alu 1 304 -5 293 302 86 0 chr17 21747281 21747397 -67757156 - MIR3 SINE MIR -35 173 48 1957 122 3 7 chr17 21747430 21747726 -67756827 - AluSq SINE Alu -18 295 1 2402 48 3 0 chr17 21747962 21748257 -67756296 - AluY SINE Alu -15 296 1 1706 155 0 0 chr17 21748262 21748540 -67756013 - AluJo SINE Alu -21 291 14 285 355 0 45 chr17 21748544 21748654 -67755899 + L2 LINE L2 3209 3313 0 3489 175 42 61 chr17 21749639 21749663 -67754890 - L1MB8 LINE L1 -7 6407 6384 2578 61 0 13 chr17 21749663 21749975 -67754578 + AluSp SINE Alu 1 308 -5 3489 175 42 61 chr17 21749975 21750216 -67754337 - L1MB8 LINE L1 -30 6384 6140 2107 118 4 0 chr17 21750216 21750495 -67754058 + AluSq SINE Alu 1 280 -33 279 0 0 0 chr17 21750495 21750526 -67754027 + (CA)n Simple_repeat Simple_repeat 1 31 0 3489 175 42 61 chr17 21750526 21751078 -67753475 - L1MB8 LINE L1 -273 6141 5580 231 114 0 0 chr17 21751078 21751113 -67753440 + (TA)n Simple_repeat Simple_repeat 2 36 0 2174 86 3 33 chr17 21751113 21751414 -67753139 - AluSq SINE Alu -21 292 1 3489 175 42 61 chr17 21751414 21751516 -67753037 - L1MB8 LINE L1 -832 5582 5501 1930 156 33 0 chr17 21751521 21751854 -67752699 + MSTB LTR MaLR 83 426 0 6335 209 64 54 chr17 21751854 21752777 -67751776 - L1MB8 LINE L1 -877 5505 4593 840 128 30 30 chr17 21752777 21752910 -67751643 - FLAM_C SINE Alu 0 133 1 6335 209 64 54 chr17 21752910 21752941 -67751612 - L1MB8 LINE L1 -1789 4593 4564 2550 78 0 0 chr17 21752941 21753249 -67751304 + AluSc SINE Alu 1 308 -1 6335 209 64 54 chr17 21753249 21753562 -67750991 - L1MB8 LINE L1 -1818 4564 4256 12089 32 1 18 chr17 21753562 21754972 -67749581 + SVA Other Other 1 1386 0 6335 209 64 54 chr17 21754972 21755622 -67748931 - L1MB8 LINE L1 -2126 4256 3567 704 183 106 95 chr17 21755676 21755807 -67748746 - L1MB8 LINE L1 -3453 2929 2801 2228 112 3 0 chr17 21755807 21756103 -67748450 + AluSp SINE Alu 1 297 -16 704 183 106 95 chr17 21756103 21756244 -67748309 - L1MB8 LINE L1 -3581 2801 2654 1747 144 17 50 chr17 21756253 21756701 -67747852 - Tigger5 DNA MER2_type 0 2323 1 732 165 8 15 chr17 21756736 21756869 -67747684 - FRAM SINE Alu -1 175 44 2066 119 7 0 chr17 21756895 21757173 -67747380 - AluSx SINE Alu -32 280 1 292 200 42 11 chr17 21757184 21757279 -67747274 - L1MB8 LINE L1 -4028 2356 2259 321 189 0 0 chr17 21757301 21757375 -67747178 - L1MA9 LINE L1 -176 6136 6063 * 3015 134 19 74 chr17 21757373 21757528 -67747025 - L1M2 LINE L1 -743 5403 5241 1886 155 13 13 chr17 21757528 21757831 -67746722 - AluSx SINE Alu -9 303 1 3015 134 19 74 chr17 21757831 21757892 -67746661 - L1M2 LINE L1 -905 5241 5178 1853 132 46 30 chr17 21757892 21758195 -67746358 + AluSx SINE Alu 1 308 -4 3015 134 19 74 chr17 21758195 21758778 -67745775 - L1M2 LINE L1 -968 5178 4734 1183 200 59 0 chr17 21758780 21759000 -67745553 - AluJo SINE Alu -8 304 72 799 118 30 0 chr17 21759000 21759135 -67745418 - L1M2 LINE L1 -1401 4745 4607 2207 113 36 3 chr17 21759136 21759437 -67745116 + AluSq SINE Alu 1 311 -2 2474 72 0 20 chr17 21759447 21759753 -67744800 + AluY SINE Alu 1 300 -11 2216 119 19 10 chr17 21759755 21759876 -67744677 + AluSp SINE Alu 1 119 -194 237 98 0 0 chr17 21759876 21759917 -67744636 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 2216 119 19 10 chr17 21759917 21760105 -67744448 + AluSp SINE Alu 119 313 0 2380 99 0 3 chr17 21760204 21760508 -67744045 + AluSx SINE Alu 1 303 -9 993 172 0 23 chr17 21760511 21760685 -67743868 + LTR39 LTR ERV1 614 783 0 1939 256 52 25 chr17 21760686 21760890 -67743663 - L1 LINE L1 -2981 3165 2968 5619 127 16 25 chr17 21760890 21761442 -67743111 + MER4D LTR ERV1 1 543 -360 2163 121 13 10 chr17 21761442 21761747 -67742806 - AluSx SINE Alu -6 306 1 5619 127 16 25 chr17 21761747 21762105 -67742448 + MER4D LTR ERV1 543 903 0 2167 117 17 10 chr17 21762110 21762409 -67742144 - AluSx SINE Alu -11 301 1 1939 256 52 25 chr17 21762409 21762736 -67741817 - L1 LINE L1 -3181 2965 2600 2355 86 10 0 chr17 21762736 21763039 -67741514 - AluSp SINE Alu -7 306 1 1939 256 52 25 chr17 21763039 21763255 -67741298 - L1 LINE L1 -3546 2600 2391 2155 270 56 62 chr17 21763363 21763666 -67740887 - HERV16 LTR ERVL -3642 1354 1051 2457 90 0 0 chr17 21763666 21763967 -67740586 - AluSc SINE Alu -8 301 1 2155 270 56 62 chr17 21763967 21764525 -67740028 - HERV16 LTR ERVL -3945 1051 497 2098 95 3 7 chr17 21764525 21764808 -67739745 - AluSp SINE Alu -2 311 30 2155 270 56 62 chr17 21764808 21764976 -67739577 - HERV16 LTR ERVL -4499 497 330 542 268 32 13 chr17 21765072 21765229 -67739324 - HERV16 LTR ERVL -4828 168 9 661 198 80 0 chr17 21765237 21765399 -67739154 - LTR16A LTR ERVL -1 449 275 363 280 10 0 chr17 21765455 21765555 -67738998 - LTR16A LTR ERVL -324 126 26 343 239 34 148 chr17 21765839 21765881 -67738672 - MER5B DNA MER1_type -3 175 130 2333 105 0 3 chr17 21765881 21766194 -67738359 - AluSx SINE Alu 0 312 1 343 239 34 148 chr17 21766194 21766327 -67738226 - MER5B DNA MER1_type -48 130 20 295 292 21 10 chr17 21766363 21766459 -67738094 - MIR SINE MIR -61 147 51 965 152 6 62 chr17 21767123 21767301 -67737252 + FAM SINE Alu 1 168 -7 2477 42 0 3 chr17 21767312 21767600 -67736953 + AluY SINE Alu 1 287 -24 585 42 0 0 chr17 21767609 21767681 -67736872 + (GA)n Simple_repeat Simple_repeat 2 73 0 357 117 83 0 chr17 21768382 21768442 -67736111 - MSTB1 LTR MaLR 0 432 368 1804 137 0 0 chr17 21768447 21768696 -67735857 + AluSx SINE Alu 1 249 -63 776 102 0 0 chr17 21768696 21768794 -67735759 - AluSg SINE Alu -211 99 2 2413 64 0 68 chr17 21768829 21769155 -67735398 - AluY SINE Alu -7 304 1 2479 68 14 0 chr17 21769610 21769904 -67734649 - AluSp SINE Alu -15 298 1 725 116 192 27 chr17 21770118 21770264 -67734289 + MLT1B LTR MaLR 1 170 -220 1499 191 62 35 chr17 21770486 21770826 -67733727 + MSTD LTR MaLR 1 349 -47 797 299 88 52 chr17 21770898 21771479 -67733074 + L1M4 LINE L1 3 604 -5938 2389 101 0 0 chr17 21771479 21771786 -67732767 + AluSc SINE Alu 1 307 -2 2164 101 30 0 chr17 21771795 21772091 -67732462 + AluSx SINE Alu 1 305 -7 259 73 24 0 chr17 21772095 21772136 -67732417 + L1MB7 LINE L1 5738 5779 -399 1860 74 22 0 chr17 21772136 21772366 -67732187 + AluSx SINE Alu 1 235 -77 514 198 0 0 chr17 21772366 21772457 -67732096 + L1MB7 LINE L1 5898 5988 -190 818 204 131 80 chr17 21772471 21772888 -67731665 + MLT2B1 LTR ERVL 1 414 0 535 139 243 7 chr17 21772889 21773033 -67731520 + L1MB7 LINE L1 5998 6175 -9 426 96 0 0 chr17 21773647 21773720 -67730833 + (CTG)n Simple_repeat Simple_repeat 3 75 0 840 174 0 0 chr17 21774515 21774647 -67729906 + FLAM_C SINE Alu 2 133 0 2288 105 3 0 chr17 21774725 21775021 -67729532 + AluSx SINE Alu 1 297 -15 1265 223 97 35 chr17 21776416 21776789 -67727764 + MSTD LTR MaLR 1 396 0 596 256 48 1 chr17 21776859 21777025 -67727528 - MIR SINE MIR -37 171 30 2067 135 0 0 chr17 21777114 21777428 -67727125 - AluSx SINE Alu 0 314 1 2119 113 61 0 chr17 21777480 21777773 -67726780 + AluSx SINE Alu 1 311 -1 2205 93 0 4 chr17 21778659 21778964 -67725589 - AluSc SINE Alu 0 304 1 2291 120 3 0 chr17 21779959 21780268 -67724285 + AluJb SINE Alu 1 310 -2 915 140 14 14 chr17 21780297 21780440 -67724113 + AluJo SINE Alu 1 143 -169 1468 94 0 0 chr17 21780443 21780624 -67723929 + AluSg SINE Alu 4 184 -126 238 97 0 0 chr17 21780625 21780656 -67723897 + AluSg SINE Alu 219 249 -52 1043 191 33 9 chr17 21780656 21780866 -67723687 + AluJo SINE Alu 85 299 -13 383 320 44 61 chr17 21781275 21781456 -67723097 - L1ME LINE L1 -521 5600 5423 2383 71 40 0 chr17 21781465 21781761 -67722792 + AluY SINE Alu 1 308 -3 609 190 61 25 chr17 21781827 21781990 -67722563 + MER96B DNA MER1_type? 1 169 -248 887 146 8 0 chr17 21782083 21782213 -67722340 - AluSq/x SINE Alu -181 131 1 1760 166 16 50 chr17 21782425 21782744 -67721809 + AluJo SINE Alu 1 308 -4 282 137 39 0 chr17 21782762 21782813 -67721740 - Alu SINE Alu -247 53 1 214 29 57 0 chr17 21782818 21782853 -67721700 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 2416 84 3 7 chr17 21782857 21783165 -67721388 - AluSq SINE Alu -1 312 6 8470 54 4 0 chr17 21783212 21784177 -67720376 - LTR5 LTR ERVK 0 969 1 928 181 18 6 chr17 21784257 21784423 -67720130 - AluJb SINE Alu -14 298 131 1910 150 7 0 chr17 21784462 21784756 -67719797 + AluSx SINE Alu 1 296 -16 2234 112 3 0 chr17 21784893 21785188 -67719365 + AluSx SINE Alu 1 296 -16 2204 84 0 39 chr17 21785188 21785496 -67719057 + AluSx SINE Alu 1 297 -15 23 33 0 0 chr17 21785611 21785641 -67718912 + GC_rich Low_complexity Low_complexity 1 30 0 245 207 0 103 chr17 21785750 21785866 -67718687 + C-rich Low_complexity Low_complexity 2 105 0 627 42 0 0 chr17 21786435 21786507 -67718046 + tRNA-Trp tRNA tRNA 1 72 -3 617 285 68 50 chr17 21787128 21787630 -67716923 + L1MEd LINE L1 505 1015 -5104 1806 135 82 7 chr17 21787709 21787991 -67716562 + AluJo SINE Alu 1 303 -9 2002 83 4 4 chr17 21787993 21788247 -67716306 + AluSp SINE Alu 50 303 -10 1123 155 103 94 chr17 21788247 21788374 -67716179 - MER4D LTR ERV1 -576 327 203 1987 100 86 10 chr17 21788374 21788665 -67715888 - AluSq SINE Alu 0 313 1 1123 155 103 94 chr17 21788665 21788841 -67715712 - MER4D LTR ERV1 -700 203 26 2477 60 17 0 chr17 21788841 21789141 -67715412 - AluY SINE Alu -6 305 1 1123 155 103 94 chr17 21789141 21789168 -67715385 - MER4D LTR ERV1 -877 26 1 247 287 40 20 chr17 21789705 21789806 -67714747 + L1ME4a LINE L1 5970 6072 -49 741 252 22 82 chr17 21789816 21790086 -67714467 + MIR SINE MIR 1 254 -8 4335 133 53 102 chr17 21790106 21790128 -67714425 + MER4D LTR ERV1 1 23 -880 1916 161 0 31 chr17 21790128 21790450 -67714103 + AluJo SINE Alu 1 312 0 4335 133 53 102 chr17 21790450 21790642 -67713911 + MER4D LTR ERV1 23 223 -680 2461 96 0 0 chr17 21790642 21790954 -67713599 + AluSq SINE Alu 1 312 -1 4335 133 53 102 chr17 21790954 21791091 -67713462 + MER4D LTR ERV1 223 365 -538 216 0 0 0 chr17 21791091 21791115 -67713438 + (TA)n Simple_repeat Simple_repeat 2 25 0 2398 116 0 0 chr17 21791115 21791425 -67713128 - AluSq SINE Alu -3 310 1 4335 133 53 102 chr17 21791425 21792017 -67712536 + MER4D LTR ERV1 363 900 -3 1509 158 79 93 chr17 21792415 21792986 -67711567 - Charlie2 DNA MER1_type -16 2846 2284 2098 103 3 28 chr17 21793161 21793452 -67711101 - AluSx SINE Alu -15 297 14 1839 129 47 4 chr17 21793865 21794143 -67710410 - AluSx SINE Alu -22 290 1 602 213 0 9 chr17 21794276 21794384 -67710169 + FLAM_C SINE Alu 2 108 -35 1450 205 17 3 chr17 21794399 21794687 -67709866 - AluJo SINE Alu -20 292 1 47 0 0 0 chr17 21794690 21794737 -67709816 + AT_rich Low_complexity Low_complexity 1 47 0 1481 167 49 24 chr17 21794737 21795024 -67709529 + AluJo SINE Alu 12 305 -7 272 250 56 56 chr17 21795256 21795335 -67709218 + MER20B DNA MER1_type 674 755 -28 2350 100 0 7 chr17 21795335 21795636 -67708917 + AluSx SINE Alu 1 299 -13 272 250 56 56 chr17 21795636 21795664 -67708889 + MER20B DNA MER1_type 754 781 -2 2106 144 0 0 chr17 21795731 21796043 -67708510 + AluSx SINE Alu 1 312 0 357 200 0 0 chr17 21796043 21796113 -67708440 + L1M4 LINE L1 5049 5118 -1028 1972 149 7 3 chr17 21796206 21796501 -67708052 + AluSx SINE Alu 1 296 -16 395 157 0 0 chr17 21796502 21796572 -67707981 + L1M4 LINE L1 5362 5431 -753 1817 145 13 44 chr17 21797004 21797321 -67707232 - AluJb SINE Alu -5 307 1 197 269 185 76 chr17 21798076 21798195 -67706358 - MIR3 SINE MIR -37 171 40 1925 135 48 0 chr17 21798455 21798744 -67705809 - AluSx SINE Alu -9 303 1 2372 97 0 13 chr17 21798751 21799060 -67705493 - AluSx SINE Alu -7 305 1 2675 106 3 13 chr17 21799242 21799621 -67704932 - THE1C LTR MaLR 0 375 1 210 37 0 0 chr17 21800188 21800215 -67704338 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1684 145 14 40 chr17 21800579 21800876 -67703677 - AluJb SINE Alu -10 302 14 274 301 54 0 chr17 21801204 21801297 -67703256 + MER94 DNA DNA 2 99 -35 200 310 69 0 chr17 21801578 21801636 -67702917 - L2 LINE L2 -4 3268 3207 295 356 17 8 chr17 21801768 21801886 -67702667 + MIR3 SINE MIR 70 188 -20 2143 197 101 32 chr17 21801890 21802397 -67702156 - MLT1F LTR MaLR 0 542 1 1829 139 9 22 chr17 21802869 21803185 -67701368 - AluSx SINE Alu 0 312 1 276 128 0 0 chr17 21803435 21803474 -67701079 + AluSx SINE Alu 6 44 -257 2163 86 0 43 chr17 21803795 21804120 -67700433 + AluY SINE Alu 1 311 0 698 101 16 78 chr17 21804124 21804253 -67700300 - FLAM_C SINE Alu -21 122 2 290 343 95 0 chr17 21804255 21804392 -67700161 - MIR SINE MIR -68 194 45 187 211 0 0 chr17 21804813 21804851 -67699702 + MIR SINE MIR 108 145 -117 1767 102 0 0 chr17 21805116 21805351 -67699202 + AluSx SINE Alu 33 267 -45 558 167 208 17 chr17 21805484 21805604 -67698949 - FLAM_C SINE Alu 0 143 1 2261 72 0 33 chr17 21805648 21805955 -67698598 - AluSx SINE Alu -15 297 1 1994 139 0 3 chr17 21805962 21806257 -67698296 - AluSg SINE Alu -16 294 1 2446 68 0 6 chr17 21806378 21806689 -67697864 - AluSg1 SINE Alu 0 309 1 2441 55 7 7 chr17 21806800 21807110 -67697443 - AluY SINE Alu -1 310 1 2141 69 34 10 chr17 21807437 21807728 -67696825 + AluY SINE Alu 1 298 -13 230 251 22 19 chr17 21807884 21807991 -67696562 - MIR SINE MIR -62 146 45 184 313 60 0 chr17 21808198 21808281 -67696272 + MIR SINE MIR 60 147 -61 450 94 0 0 chr17 21808658 21808722 -67695831 + (CA)n Simple_repeat Simple_repeat 2 65 0 1450 126 20 157 chr17 21809082 21809432 -67695121 - AluYb8 SINE Alu -16 302 1 245 320 141 6 chr17 21809450 21809606 -67694947 + L2 LINE L2 2923 3099 -173 213 227 31 41 chr17 21809923 21810020 -67694533 + (CCCG)n Simple_repeat Simple_repeat 4 99 0 262 246 14 0 chr17 21810286 21810355 -67694198 - L2 LINE L2 -203 3069 3000 238 313 0 0 chr17 21810370 21810437 -67694116 - L2 LINE L2 0 3272 3206 233 296 136 0 chr17 21810538 21810626 -67693927 - MIR SINE MIR -111 151 52 257 338 13 0 chr17 21811049 21811126 -67693427 - MIR3 SINE MIR -50 158 81 481 285 165 66 chr17 21811218 21811642 -67692911 + LTR16C LTR ERVL 26 491 0 537 342 58 26 chr17 21811645 21811987 -67692566 - L2 LINE L2 0 3272 2920 391 271 86 29 chr17 21812272 21812412 -67692141 - MIR SINE MIR -66 196 49 2176 88 34 0 chr17 21812420 21812716 -67691837 + AluSx SINE Alu 1 306 -6 2165 95 20 0 chr17 21812716 21813010 -67691543 + AluY SINE Alu 1 302 -9 180 0 0 0 chr17 21813014 21813034 -67691519 + (CAA)n Simple_repeat Simple_repeat 2 21 0 677 296 15 10 chr17 21813267 21813473 -67691080 + MIR SINE MIR 50 256 -6 596 238 52 43 chr17 21813487 21813728 -67690825 + MIR SINE MIR 20 262 0 275 284 46 17 chr17 21813767 21813909 -67690644 - MIR SINE MIR -35 173 25 200 297 63 9 chr17 21814207 21814318 -67690235 + MIR3 SINE MIR 10 126 -82 600 295 145 9 chr17 21814701 21815026 -67689527 - L2 LINE L2 -1 3312 2944 262 338 55 21 chr17 21815177 21815322 -67689231 - MIR SINE MIR -65 197 48 1655 157 27 33 chr17 21815466 21815644 -67688909 - AluJo SINE Alu -10 302 125 234 0 0 0 chr17 21815644 21815670 -67688883 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1655 157 27 33 chr17 21815670 21815791 -67688762 - AluJo SINE Alu -187 125 5 440 327 62 64 chr17 21815812 21816249 -67688304 - L2 LINE L2 0 3272 2837 276 276 26 0 chr17 21816455 21816531 -67688022 + GA-rich Low_complexity Low_complexity 3 80 0 449 265 8 23 chr17 21816973 21817105 -67687448 - MIR SINE MIR -129 133 4 207 100 0 0 chr17 21817242 21817272 -67687281 + (TC)n Simple_repeat Simple_repeat 1 30 0 1515 144 21 103 chr17 21817302 21817641 -67686912 - AluJb SINE Alu -1 311 1 1059 61 0 0 chr17 21817947 21818079 -67686474 - AluSg/x SINE Alu -13 299 168 445 133 24 12 chr17 21818093 21818176 -67686377 + LTR25 LTR ERV1 25 108 -686 1265 48 30 6 chr17 21818176 21818341 -67686212 - AluSq SINE Alu -144 169 1 2293 93 0 6 chr17 21818344 21818656 -67685897 - AluSg SINE Alu 0 310 1 1025 146 12 0 chr17 21818831 21818996 -67685557 + FRAM SINE Alu 6 172 -4 2299 39 14 0 chr17 21819067 21819373 -67685180 - AluY SINE Alu 0 310 1 2131 110 0 0 chr17 21819375 21819667 -67684886 - AluSx SINE Alu -20 292 1 1032 109 0 0 chr17 21820059 21820196 -67684357 + AluSq/x SINE Alu 1 137 -176 2164 98 3 3 chr17 21820197 21820492 -67684061 + AluSx SINE Alu 1 295 -17 1732 128 0 0 chr17 21820507 21820756 -67683797 + AluSx SINE Alu 56 304 -8 2094 79 14 7 chr17 21820758 21821058 -67683495 + AluSx SINE Alu 3 304 0 1442 119 0 47 chr17 21821328 21821563 -67682990 - AluSg/x SINE Alu -6 306 83 228 294 132 37 chr17 21821799 21821935 -67682618 + MIR SINE MIR 1 149 -113 1164 139 6 0 chr17 21821984 21822157 -67682396 + AluSx SINE Alu 1 174 -138 287 299 35 0 chr17 21822464 21822551 -67682002 + Charlie8 DNA MER1_type 135 224 -2193 1439 155 23 111 chr17 21822552 21822775 -67681778 - AluJo SINE Alu 0 312 128 2275 98 10 0 chr17 21822775 21823081 -67681472 + AluSg SINE Alu 2 310 0 1439 155 23 111 chr17 21823081 21823199 -67681354 - AluJo SINE Alu -184 128 1 182 222 0 22 chr17 21823212 21823257 -67681296 + L2 LINE L2 2698 2741 -573 548 307 24 10 chr17 21823358 21823659 -67680894 - L1MEd LINE L1 -4896 1488 1175 630 142 0 28 chr17 21823659 21823800 -67680753 + (TCC)n Simple_repeat Simple_repeat 3 139 0 525 256 26 10 chr17 21823841 21824036 -67680517 - L1MEd LINE L1 -5051 1321 1124 187 304 117 85 chr17 21824043 21824290 -67680263 + L2 LINE L2 2933 3187 -85 1903 123 3 54 chr17 21824603 21824920 -67679633 - AluJo SINE Alu -11 301 1 1117 157 0 0 chr17 21825679 21825857 -67678696 - AluSg/x SINE Alu -1 309 132 1886 59 0 8 chr17 21825857 21826096 -67678457 - AluSc SINE Alu -8 301 65 910 278 99 50 chr17 21826314 21826757 -67677796 - L2 LINE L2 -10 3303 2839 261 236 0 0 chr17 21827785 21827840 -67676713 + MIR SINE MIR 94 148 -60 744 135 0 26 chr17 21828214 21828370 -67676183 + (TCC)n Simple_repeat Simple_repeat 3 154 0 518 261 26 10 chr17 21828411 21828606 -67675947 - L1MEd LINE L1 -5051 1068 871 187 304 117 85 chr17 21828613 21828860 -67675693 + L2 LINE L2 2933 3187 -85 1903 123 3 54 chr17 21829174 21829491 -67675062 - AluJo SINE Alu -11 301 1 1082 156 0 6 chr17 21830250 21830429 -67674124 - AluSg/x SINE Alu -1 311 134 2294 74 0 22 chr17 21830429 21830740 -67673813 - AluSq SINE Alu -9 304 1 1438 133 0 5 chr17 21830946 21831156 -67673397 + AluJb SINE Alu 70 278 -34 1725 158 10 6 chr17 21831466 21831777 -67672776 + AluJo SINE Alu 1 312 0 194 128 26 0 chr17 21832098 21832137 -67672416 + (TTCA)n Simple_repeat Simple_repeat 2 41 0 2153 84 0 3 chr17 21832143 21832468 -67672085 - AluY SINE Alu 0 324 1 1816 122 51 14 chr17 21832474 21832770 -67671783 - AluSx SINE Alu -5 307 1 2316 74 6 13 chr17 21832791 21833102 -67671451 - AluSc SINE Alu 0 309 1 22 0 0 0 chr17 21833536 21833558 -67670995 + AT_rich Low_complexity Low_complexity 1 22 0 442 208 62 84 chr17 21833636 21833806 -67670747 - MLT1H LTR MaLR 0 582 406 267 213 14 15 chr17 21833948 21834015 -67670538 - MLT1H LTR MaLR -273 160 65 182 125 0 0 chr17 21834335 21834367 -67670186 - MIR SINE MIR -125 137 106 1720 161 25 0 chr17 21834408 21834693 -67669860 + AluJb SINE Alu 1 292 -20 1001 105 0 33 chr17 21834694 21834846 -67669707 + AluSq/x SINE Alu 1 147 -165 669 247 12 29 chr17 21834894 21835064 -67669489 - MIR SINE MIR -50 212 46 497 275 31 12 chr17 21835330 21835490 -67669063 + MIR SINE MIR 74 236 -26 246 225 70 14 chr17 21835647 21835718 -67668835 - MIR3 SINE MIR -25 183 109 303 183 42 61 chr17 21835765 21836418 -67668135 + (CCCA)n Simple_repeat Simple_repeat 1 640 0 297 128 0 0 chr17 21837062 21837109 -67667444 - MSTB2 LTR MaLR 0 457 411 1591 160 7 4 chr17 21837112 21837387 -67667166 - AluJo SINE Alu -9 303 28 418 288 88 0 chr17 21837545 21837705 -67666848 + L2 LINE L2 2922 3095 -177 284 350 24 8 chr17 21837985 21838108 -67666445 + MIR SINE MIR 19 143 -65 368 277 100 42 chr17 21838113 21838306 -67666247 - L2 LINE L2 -10 3303 3123 2174 98 3 0 chr17 21838306 21838601 -67665952 + AluSp SINE Alu 1 296 -17 2407 78 0 0 chr17 21838601 21838908 -67665645 + AluSx SINE Alu 1 308 -4 368 277 100 42 chr17 21838908 21838973 -67665580 - L2 LINE L2 -189 3124 3029 388 259 15 30 chr17 21839089 21839220 -67665333 + L2 LINE L2 3173 3301 -12 274 264 199 26 chr17 21839363 21839638 -67664915 - L2 LINE L2 -175 3097 2780 861 137 0 0 chr17 21839693 21839817 -67664736 + FRAM SINE Alu 33 156 -20 2270 64 0 3 chr17 21839823 21840130 -67664423 + AluY SINE Alu 1 306 0 460 327 119 0 chr17 21840213 21840415 -67664138 + MIR SINE MIR 37 262 0 466 265 61 0 chr17 21840513 21840537 -67664016 - LTR16C LTR ERVL 0 491 470 2086 103 0 10 chr17 21840537 21840829 -67663724 + AluSc SINE Alu 1 289 -20 466 265 61 0 chr17 21840829 21840936 -67663617 - LTR16C LTR ERVL -21 470 352 231 235 0 0 chr17 21841042 21841091 -67663462 - LTR16C LTR ERVL -338 153 105 378 164 82 119 chr17 21841091 21841225 -67663328 + MER53 DNA DNA 1 129 -60 1662 113 0 0 chr17 21841230 21841461 -67663092 + AluSg SINE Alu 1 231 -79 2536 45 0 6 chr17 21841649 21841962 -67662591 + AluY SINE Alu 1 311 0 437 241 90 28 chr17 21842204 21842416 -67662137 - MER113 DNA MER1_type? -176 345 121 1757 145 3 3 chr17 21842416 21842718 -67661835 + AluJo SINE Alu 1 302 0 185 156 0 44 chr17 21843454 21843499 -67661054 + GA-rich Low_complexity Low_complexity 3 45 0 1285 181 126 4 chr17 21843538 21843658 -67660895 + AluSx SINE Alu 1 105 -207 240 35 0 0 chr17 21843658 21843687 -67660866 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1285 181 126 4 chr17 21843687 21843836 -67660717 + AluSx SINE Alu 105 303 -9 3121 179 24 8 chr17 21843838 21844423 -67660130 - L1MC2 LINE L1 -9 6335 5742 1048 157 0 0 chr17 21844423 21844589 -67659964 - AluSg/x SINE Alu -17 293 128 211 206 145 99 chr17 21945440 21945571 -67558982 - MIR SINE MIR -82 180 44 237 333 16 0 chr17 21945574 21945637 -67558916 - MIR SINE MIR -185 77 14 1861 133 4 0 chr17 21945794 21946073 -67558480 - AluSx SINE Alu 0 312 33 2257 92 14 0 chr17 21946260 21946554 -67557999 - AluSp SINE Alu -15 298 1 210 248 238 9 chr17 21946710 21946815 -67557738 - MIR SINE MIR -17 245 117 2157 119 8 72 chr17 21947211 21947571 -67556982 - MER1B DNA MER1_type 0 337 1 1389 135 14 87 chr17 21948046 21948335 -67556218 + AluJo SINE Alu 45 312 0 3350 188 16 31 chr17 21949653 21950650 -67553903 + L1P4 LINE L1 4549 5524 -642 740 163 0 0 chr17 21950753 21950882 -67553671 + AluJb SINE Alu 184 312 0 271 233 159 91 chr17 21950905 21951081 -67553472 - L2 LINE L2 -240 3073 2886 345 180 11 34 chr17 21951089 21951178 -67553375 + FLAM_A SINE Alu 46 132 -1 2167 106 0 13 chr17 21951180 21951315 -67553238 + AluSx SINE Alu 1 136 -176 2029 114 23 3 chr17 21951315 21951621 -67552932 + AluSx SINE Alu 1 312 0 2167 106 0 13 chr17 21951621 21951796 -67552757 + AluSx SINE Alu 136 307 -5 2338 57 7 3 chr17 21951799 21952099 -67552454 + AluY SINE Alu 1 301 -10 270 260 234 0 chr17 21952404 21952481 -67552072 - MIR SINE MIR -116 146 52 1823 114 0 0 chr17 21952616 21952871 -67551682 + AluSx SINE Alu 46 300 -12 1009 204 39 46 chr17 21952873 21953017 -67551536 + L1MD2 LINE L1 5887 6031 -328 1568 173 0 27 chr17 21953017 21953153 -67551400 + AluJo SINE Alu 1 139 -173 2218 60 10 17 chr17 21953153 21953451 -67551102 + AluY SINE Alu 1 296 -15 1568 173 0 27 chr17 21953451 21953609 -67550944 + AluJo SINE Alu 139 287 -25 1009 204 39 46 chr17 21953609 21953874 -67550679 + L1MD2 LINE L1 6031 6344 -15 2023 128 7 0 chr17 21953891 21954181 -67550372 + AluSx SINE Alu 1 292 -20 461 241 83 0 chr17 21954192 21954318 -67550235 - MLT1C LTR MaLR -63 404 268 923 124 0 0 chr17 21954318 21954447 -67550106 - LOR1a LTR ERV1 0 497 369 1810 248 54 8 chr17 21954447 21954948 -67549605 + L1M4 LINE L1 3804 4327 -1819 589 133 33 33 chr17 21954948 21955068 -67549485 - AluSp/q SINE Alu -1 312 193 1167 67 7 0 chr17 21955168 21955318 -67549235 + AluYa5 SINE Alu 153 303 -8 1333 167 8 20 chr17 21955320 21955571 -67548982 + AluJb SINE Alu 2 249 -63 1665 163 19 25 chr17 21955571 21955934 -67548619 + L1MB4 LINE L1 5804 6164 -16 937 157 22 101 chr17 21955950 21956217 -67548336 - AluJo SINE Alu -22 290 45 23 54 0 0 chr17 21956343 21956380 -67548173 + AT_rich Low_complexity Low_complexity 1 37 0 1100 202 0 9 chr17 21956555 21956773 -67547780 + U3 snRNA snRNA 1 216 -1 1285 75 0 0 chr17 21956983 21957144 -67547409 - AluY SINE Alu -150 161 1 796 144 0 24 chr17 21957144 21957311 -67547242 - L1MCa LINE L1 -3956 2470 2308 1722 176 3 22 chr17 21957322 21957635 -67546918 - AluJo SINE Alu -5 307 1 830 151 7 43 chr17 21957635 21957774 -67546779 - AluJo SINE Alu -177 135 2 2080 78 7 11 chr17 21957985 21958291 -67546262 - AluSg SINE Alu 0 305 1 373 148 0 0 chr17 21959221 21959282 -67545271 - Alu SINE Alu -1 300 240 863 200 9 86 chr17 21959382 21959449 -67545104 - AluJb SINE Alu -117 195 124 2117 109 0 3 chr17 21959449 21959751 -67544802 - AluSx SINE Alu -11 301 1 2034 129 0 0 chr17 21959757 21960051 -67544502 - AluSc SINE Alu -15 294 1 1530 157 88 7 chr17 21960051 21960325 -67544228 - AluSx SINE Alu -16 296 1 863 200 9 86 chr17 21960325 21960459 -67544094 - AluJb SINE Alu -191 121 2 1939 106 57 0 chr17 21960461 21960743 -67543810 - AluSg SINE Alu -12 298 1 1792 154 0 4 chr17 21960817 21961097 -67543456 - AluJb SINE Alu -33 279 1 1759 91 8 0 chr17 21961216 21961457 -67543096 - AluSc SINE Alu -16 293 51 1424 166 37 30 chr17 21961560 21961855 -67542698 - AluSx SINE Alu -15 297 1 1615 193 9 26 chr17 21961878 21962225 -67542328 - MLT1-int LTR MaLR -847 524 184 1952 144 10 0 chr17 21962474 21962779 -67541774 + AluSq SINE Alu 1 308 -5 195 323 48 0 chr17 21962911 21962973 -67541580 + L2 LINE L2 3192 3256 -57 27 0 0 0 chr17 21963387 21963414 -67541139 + AT_rich Low_complexity Low_complexity 1 27 0 2249 84 0 10 chr17 21963440 21963736 -67540817 - AluY SINE Alu -18 293 1 3598 56 0 9 chr17 21963741 21964189 -67540364 - L1PA6 LINE L1 0 6154 5711 2613 242 60 22 chr17 21964256 21965090 -67539463 - HAL1 LINE L1 -123 2384 1519 1221 117 0 0 chr17 21965624 21965803 -67538750 - AluSq SINE Alu -1 312 134 2465 59 0 3 chr17 21965803 21966106 -67538447 - AluY SINE Alu -9 302 1 2326 64 0 38 chr17 21966106 21966420 -67538133 - AluY SINE Alu -9 302 1 2124 102 0 13 chr17 21966563 21966732 -67537821 - AluSq SINE Alu -12 301 136 2374 65 3 7 chr17 21966732 21967042 -67537511 - AluSp SINE Alu -4 309 1 2124 102 0 13 chr17 21967042 21967177 -67537376 - AluSq SINE Alu -177 136 1 211 135 0 39 chr17 21968248 21968300 -67536253 + (TTTC)n Simple_repeat Simple_repeat 3 52 0 1775 149 16 13 chr17 21968420 21968729 -67535824 - AluJb SINE Alu 0 312 3 660 124 0 0 chr17 21968876 21968981 -67535572 - AluSg/x SINE Alu -3 307 203 357 119 6 3 chr17 21968994 21969063 -67535490 + Alu SINE Alu 248 302 0 345 250 200 21 chr17 21969987 21970127 -67534426 - MIR SINE MIR -80 182 18 1556 88 0 14 chr17 21970401 21970616 -67533937 + AluSx SINE Alu 1 212 -100 849 204 17 17 chr17 21970716 21970892 -67533661 - AluJo SINE Alu -128 184 9 2233 76 0 0 chr17 21970908 21971199 -67533354 - AluSx SINE Alu -21 291 1 802 117 7 44 chr17 21971204 21971341 -67533212 - L1MB2 LINE L1 -225 5946 5815 1711 148 43 13 chr17 21971341 21971644 -67532909 - AluJo SINE Alu 0 312 1 2237 79 3 10 chr17 21972117 21972422 -67532131 + AluSp SINE Alu 1 303 -10 1744 184 29 9 chr17 21973386 21973728 -67530825 + MER47A DNA MER2_type 18 366 0 494 260 92 23 chr17 21974182 21974355 -67530198 - Zaphod DNA AcHobo -2146 1885 1701 1970 137 0 3 chr17 21974355 21974662 -67529891 + AluSq SINE Alu 1 306 -7 987 87 0 0 chr17 21974662 21974789 -67529764 + AluSg SINE Alu 1 127 -183 1634 99 4 9 chr17 21974790 21975022 -67529531 + AluSq SINE Alu 11 241 -72 3968 79 33 18 chr17 21975123 21975666 -67528887 + PABL_A LTR ERV1 110 660 0 2239 103 0 0 chr17 21976224 21976526 -67528027 - AluSx SINE Alu -9 303 2 2079 110 6 31 chr17 21976758 21977075 -67527478 - AluSx SINE Alu -3 309 1 616 124 21 10 chr17 21977147 21977244 -67527309 + MER4A LTR ERV1 1 98 -566 1857 131 3 82 chr17 21977244 21977619 -67526934 + MER4A LTR ERV1 261 664 0 917 191 0 46 chr17 21978114 21978287 -67526266 - FAM SINE Alu -9 166 2 2253 210 16 7 chr17 21978463 21979020 -67525533 + L1 LINE L1 3496 4057 -2089 708 195 0 47 chr17 21979025 21979174 -67525379 + FLAM_C SINE Alu 2 143 0 1928 200 34 45 chr17 21979178 21979709 -67524844 + L1 LINE L1 4046 4570 -1576 348 270 121 6 chr17 21980181 21980355 -67524198 - LTR33A LTR ERVL -7 516 323 435 245 182 0 chr17 21980442 21980601 -67523952 - LTR50 LTR ERVL -607 188 1 257 206 145 99 chr17 21981699 21981830 -67522723 - MIR SINE MIR -82 180 44 236 333 16 0 chr17 21981833 21981896 -67522657 - MIR SINE MIR -185 77 14 2353 66 3 3 chr17 21981997 21982301 -67522252 - AluY SINE Alu -7 304 1 316 188 38 38 chr17 21982302 21982382 -67522171 + MER3 DNA MER1_type 125 204 -5 534 272 87 11 chr17 21982409 21982593 -67521960 + L2 LINE L2 3116 3313 0 196 185 56 148 chr17 21982610 21982718 -67521835 + MIR SINE MIR 33 130 -78 1484 43 0 134 chr17 21982785 21983017 -67521536 + LTR14A LTR ERVK 1 201 -143 2218 160 35 2 chr17 21983017 21983417 -67521136 - L1PB4 LINE L1 -205 5951 5539 2143 76 45 0 chr17 21985688 21985976 -67518577 - AluY SINE Alu -10 301 1 431 36 18 0 chr17 21987039 21987094 -67517459 + HY3 scRNA scRNA 18 73 -28 4423 253 58 21 chr17 21987586 21987707 -67516846 - L1PBb LINE L1 -2765 4032 3917 222 37 0 0 chr17 21987707 21987734 -67516819 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 4423 253 58 21 chr17 21987734 21990120 -67514433 - L1PBb LINE L1 -2880 3917 1362 2316 127 0 12 chr17 21990783 21991121 -67513432 + MER1B DNA MER1_type 4 337 0 338 323 6 49 chr17 21991220 21991384 -67513169 - L1PBb LINE L1 -5268 1519 1363 * 1092 332 31 38 chr17 21991382 21991996 -67512557 - L1PBb LINE L1 -6177 610 1 954 150 12 19 chr17 21992155 21992315 -67512238 + AluJb SINE Alu 129 287 -25 532 279 124 63 chr17 21992783 21993098 -67511455 - MER102b DNA MER1_type -7 334 1 188 333 234 12 chr17 21993100 21993271 -67511282 + MIR SINE MIR 36 244 -18 197 333 48 12 chr17 21993418 21993502 -67511051 + MER5A DNA MER1_type 1 87 -102 195 200 22 22 chr17 21993561 21993606 -67510947 - MER5A DNA MER1_type -105 84 40 2136 91 3 7 chr17 21994144 21994488 -67510065 - AluSp SINE Alu 0 343 1 974 104 0 0 chr17 21994496 21994631 -67509922 - AluSp/q SINE Alu -22 291 157 400 143 0 0 chr17 21995939 21995995 -67508558 + AluJ/FLAM SINE Alu 2 57 -245 2477 127 27 11 chr17 21995995 21996622 -67507931 + L1P4 LINE L1 5000 5636 -529 797 206 0 0 chr17 21996623 21996793 -67507760 - L1P LINE L1 -1253 4893 4724 479 191 0 0 chr17 21996790 21996884 -67507669 + L1 LINE L1 4595 4688 -1458 * 843 205 44 44 chr17 21996884 21997089 -67507464 + Tigger2 DNA MER2_type 2511 2715 -3 795 251 77 60 chr17 21997096 21997395 -67507158 + L1MC4 LINE L1 6538 6841 -1201 894 198 6 6 chr17 21997495 21997662 -67506891 - AluJo SINE Alu -145 167 1 2332 59 7 3 chr17 21997665 21997968 -67506585 - AluY SINE Alu -7 304 1 1755 71 0 28 chr17 21998287 21998568 -67505985 - AluSx SINE Alu 0 311 38 521 152 188 0 chr17 21998618 21998730 -67505823 + FLAM_C SINE Alu 1 133 0 464 296 48 42 chr17 21998751 21998973 -67505580 - L1MC4a LINE L1 -522 5599 5380 1984 119 17 10 chr17 21998973 21999139 -67505414 - AluSx SINE Alu -8 304 134 2245 85 0 0 chr17 21999139 21999434 -67505119 - AluY SINE Alu -16 295 1 1984 119 17 10 chr17 21999434 21999569 -67504984 - AluSx SINE Alu -178 134 1 464 296 48 42 chr17 21999569 21999591 -67504962 - L1MC4a LINE L1 -741 5380 5360 1979 123 0 40 chr17 21999591 21999770 -67504783 - AluSx SINE Alu 0 312 150 2316 66 3 0 chr17 21999770 22000073 -67504480 - AluY SINE Alu -7 304 1 1188 126 0 48 chr17 22000073 22000218 -67504335 - AluSx SINE Alu -177 135 1 1979 123 0 40 chr17 22000073 22000218 -67504335 - AluSx SINE Alu -162 150 1 1999 130 0 10 chr17 22000220 22000519 -67504034 - AluSx SINE Alu -16 296 1 464 296 48 42 chr17 22000519 22000667 -67503886 - L1MC4a LINE L1 -487 5634 5488 1717 141 12 62 chr17 22000673 22000993 -67503560 - AluSx SINE Alu -8 304 1 2374 82 0 0 chr17 22001007 22001312 -67503241 - AluSc SINE Alu -4 305 1 802 151 14 43 chr17 22001331 22001470 -67503083 + AluJo SINE Alu 2 136 -176 759 180 0 0 chr17 22001524 22001652 -67502901 + AluJo SINE Alu 130 257 -55 602 286 98 7 chr17 22001692 22001979 -67502574 - L1M4 LINE L1 -3467 2679 2367 180 0 0 0 chr17 22001986 22002006 -67502547 + (TTCC)n Simple_repeat Simple_repeat 3 22 0 716 154 34 0 chr17 22002021 22002138 -67502415 - AluSg/x SINE Alu -1 311 191 841 200 7 0 chr17 22002549 22002704 -67501849 - AluJb SINE Alu -153 159 4 377 338 3 36 chr17 22003665 22003978 -67500575 + C-rich Low_complexity Low_complexity 1 302 0 225 154 0 0 chr17 22003999 22004038 -67500515 + C-rich Low_complexity Low_complexity 1 39 0 257 318 23 23 chr17 22004040 22004216 -67500337 + CT-rich Low_complexity Low_complexity 4 179 0 264 297 0 68 chr17 22004347 22004539 -67500014 + C-rich Low_complexity Low_complexity 2 180 0 * 296 285 38 13 chr17 22004445 22004603 -67499950 + CT-rich Low_complexity Low_complexity 2 163 0 277 353 7 13 chr17 22004628 22004778 -67499775 + C-rich Low_complexity Low_complexity 2 150 0 208 274 0 0 chr17 22005149 22005200 -67499353 + (CCG)n Simple_repeat Simple_repeat 2 52 0 269 342 0 51 chr17 22005256 22005414 -67499139 + G-rich Low_complexity Low_complexity 2 151 0 2129 92 3 0 chr17 22005433 22005728 -67498825 + AluSg SINE Alu 1 296 -14 1298 72 0 0 chr17 22006176 22006370 -67498183 - AluY SINE Alu 0 312 119 737 112 9 0 chr17 22006474 22006581 -67497972 - AluY SINE Alu -202 109 2 460 274 96 0 chr17 22006687 22006822 -67497731 + L2 LINE L2 2514 2661 -653 817 240 13 52 chr17 22006824 22007057 -67497496 - MER58A DNA MER1_type 0 224 1 1514 179 3 14 chr17 22007112 22007397 -67497156 + AluJb SINE Alu 1 282 -30 432 55 0 0 chr17 22007412 22007467 -67497086 + (TA)n Simple_repeat Simple_repeat 1 55 0 328 268 150 31 chr17 22007495 22007622 -67496931 - L1MEc LINE L1 -4339 2057 1916 709 276 44 32 chr17 22009052 22009302 -67495251 - MER89-int LTR ERV1 -5142 1659 1407 225 326 0 11 chr17 22009355 22009447 -67495106 + CT-rich Low_complexity Low_complexity 2 92 0 3152 161 99 25 chr17 22010109 22010391 -67494162 + MER67C LTR ERV1 3 262 -448 2286 62 14 0 chr17 22010391 22010683 -67493870 + AluSp SINE Alu 1 296 -17 3152 161 99 25 chr17 22010683 22011054 -67493499 + MER67C LTR ERV1 262 705 -5 1998 85 4 0 chr17 22011054 22011313 -67493240 + AluSp SINE Alu 1 260 -53 2351 83 0 6 chr17 22011313 22011624 -67492929 + AluSg SINE Alu 1 310 0 1027 159 0 0 chr17 22011629 22011799 -67492754 + AluSg/x SINE Alu 136 305 -5 1585 173 27 20 chr17 22011807 22012107 -67492446 + AluJb SINE Alu 1 302 -10 687 196 22 73 chr17 22012128 22012307 -67492246 - L1 LINE L1 -1156 4990 4821 501 206 28 0 chr17 22012325 22012466 -67492087 + GA-rich Low_complexity Low_complexity 2 146 0 2122 129 0 0 chr17 22012467 22012776 -67491777 + AluSg SINE Alu 1 309 -1 257 204 0 20 chr17 22012776 22012825 -67491728 + polypurine Low_complexity Low_complexity 1 48 0 741 222 149 0 chr17 22012825 22013019 -67491534 + MLT1G3 LTR MaLR 78 300 -230 636 260 23 55 chr17 22013238 22013391 -67491162 + LTR16C LTR ERVL 270 415 -76 2097 120 10 0 chr17 22013391 22013692 -67490861 + AluSx SINE Alu 9 312 0 636 260 23 55 chr17 22013692 22013757 -67490796 + LTR16C LTR ERVL 415 481 -10 786 297 52 0 chr17 22013766 22013998 -67490555 + MIR SINE MIR 8 251 -11 316 264 96 45 chr17 22014020 22014198 -67490355 - MLT1K LTR MaLR -46 542 356 2041 132 3 0 chr17 22014221 22014517 -67490036 + AluSq SINE Alu 7 303 -10 1795 137 25 0 chr17 22014537 22014822 -67489731 + AluSq SINE Alu 12 303 -10 945 118 0 7 chr17 22014822 22014958 -67489595 + AluSq/x SINE Alu 1 135 -177 2145 54 0 0 chr17 22014958 22015216 -67489337 + AluY SINE Alu 1 258 -53 875 195 53 102 chr17 22015319 22015672 -67488881 + L1MC4 LINE L1 7720 7995 0 758 126 42 48 chr17 22015762 22015929 -67488624 + L1MC4 LINE L1 7242 7407 -635 10015 226 17 19 chr17 22015942 22018669 -67485884 + L1P4 LINE L1 1122 4652 -2932 11335 196 78 19 chr17 22018674 22020405 -67484148 - L1PB1 LINE L1 -2 6865 5238 180 0 0 0 chr17 22020405 22020425 -67484128 + (TTA)n Simple_repeat Simple_repeat 2 21 0 11335 196 78 19 chr17 22020425 22021210 -67483343 - L1PB1 LINE L1 -1629 5238 4501 2134 150 22 30 chr17 22021210 22021577 -67482976 - THE1B LTR MaLR 0 364 1 11335 196 78 19 chr17 22021577 22022885 -67481668 - L1PB1 LINE L1 -2366 4501 2801 8037 132 12 0 chr17 22022886 22024596 -67479957 + L1P4 LINE L1 5484 7208 -404 1449 205 7 3 chr17 22025334 22025642 -67478911 - AluJb SINE Alu 0 309 1 257 291 159 72 chr17 22025846 22026345 -67478208 - L2 LINE L2 0 3272 2745 334 274 53 26 chr17 22028167 22028280 -67476273 - MIR3 SINE MIR -48 160 45 2315 90 0 0 chr17 22028360 22028671 -67475882 + AluY SINE Alu 1 311 0 2142 120 0 0 chr17 22028685 22028993 -67475560 + AluSg SINE Alu 3 310 0 6640 234 70 31 chr17 22033247 22033830 -67470723 - L1 LINE L1 -3151 4057 3498 182 37 37 0 chr17 22033830 22033857 -67470696 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 6640 234 70 31 chr17 22033857 22034382 -67470171 - L1 LINE L1 -3710 3498 2995 1826 162 0 13 chr17 22034382 22034697 -67469856 - AluSx SINE Alu -1 311 1 6640 234 70 31 chr17 22034697 22036634 -67467919 - L1 LINE L1 -4213 2995 841 877 235 5 0 chr17 22036726 22036936 -67467617 - L1 LINE L1 -6628 581 13 246 282 0 14 chr17 22038096 22038167 -67466386 + Tigger5 DNA MER2_type 2249 2318 -5 345 250 0 25 chr17 22038185 22038265 -67466288 - Tigger5 DNA MER2_type -2244 79 2 1210 283 142 20 chr17 22038641 22039134 -67465419 - MLT1G1 LTR MaLR 0 595 2 2012 81 19 42 chr17 22039883 22040191 -67464362 + AluY SINE Alu 1 301 -10 351 301 96 7 chr17 22040431 22040567 -67463986 - MIR SINE MIR -34 228 81 216 0 0 0 chr17 22041175 22041199 -67463354 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 294 303 110 0 chr17 22041530 22041639 -67462914 - MIR3 SINE MIR -7 201 81 308 257 86 37 chr17 22042853 22043040 -67461513 - L2 LINE L2 -556 2758 2563 190 260 106 29 chr17 22043359 22043463 -67461090 - L3b LINE CR1 -201 1382 1271 180 211 77 19 chr17 22045360 22045412 -67459141 + MIR3 SINE MIR 102 156 -52 227 220 13 31 chr17 22047128 22047287 -67457266 + CT-rich Low_complexity Low_complexity 2 157 0 1808 147 0 14 chr17 22047464 22047757 -67456796 - AluJb SINE Alu -21 291 3 1601 133 133 15 chr17 22047758 22048022 -67456531 - AluJo SINE Alu -7 295 1 426 241 76 21 chr17 22048023 22048168 -67456385 - MER106A DNA MER1_type -79 157 5 2074 107 0 0 chr17 22048219 22048509 -67456044 - AluSx SINE Alu -15 297 8 216 247 55 14 chr17 22048752 22048825 -67455728 + C-rich Low_complexity Low_complexity 2 77 0 236 239 87 76 chr17 22050152 22050336 -67454217 + L2 LINE L2 2870 3055 -217 856 283 36 12 chr17 22052199 22052446 -67452107 + MIR SINE MIR 9 261 -1 515 283 51 0 chr17 22052433 22052571 -67451982 + L2 LINE L2 3169 3313 0 * 1860 151 0 13 chr17 22053115 22053413 -67451140 - AluJb SINE Alu -16 296 3 1429 150 135 22 chr17 22053414 22053681 -67450872 - AluJo SINE Alu -15 297 1 2241 101 0 0 chr17 22054963 22055261 -67449292 - AluSx SINE Alu -14 298 1 2298 103 0 0 chr17 22056204 22056514 -67448039 - AluSx SINE Alu -2 310 1 1263 170 6 45 chr17 22056593 22056908 -67447645 + MLT1D LTR MaLR 218 505 0 1792 104 39 8 chr17 22057179 22057438 -67447115 - AluSx SINE Alu -13 299 33 1021 76 8 0 chr17 22057438 22057569 -67446984 - AluSq/x SINE Alu -180 132 1 1442 202 4 4 chr17 22057588 22057845 -67446708 + AluJo SINE Alu 43 299 -13 1544 245 17 12 chr17 22057854 22058258 -67446295 - MLT1D LTR MaLR -53 452 47 41 58 0 0 chr17 22058358 22058427 -67446126 + AT_rich Low_complexity Low_complexity 1 69 0 415 338 49 66 chr17 22058832 22059113 -67445440 + L1MEc LINE L1 786 1202 -1374 1891 85 4 0 chr17 22059113 22059361 -67445192 + AluY SINE Alu 1 249 -62 415 338 49 66 chr17 22059361 22059391 -67445162 + L1MEc LINE L1 1202 1231 -1345 198 383 78 5 chr17 22059401 22059594 -67444959 + L2 LINE L2 2543 2749 -565 3262 116 24 24 chr17 22059609 22060360 -67444193 - L1PA13 LINE L1 -1 6153 5384 499 255 13 110 chr17 22060620 22060852 -67443701 + LTR41 LTR ERVL 469 722 -73 988 68 94 233 chr17 22060852 22060938 -67443615 - MER30 DNA MER1_type -1 229 133 1945 124 7 13 chr17 22060938 22061237 -67443316 + AluSx SINE Alu 1 297 -15 2009 125 27 0 chr17 22061239 22061534 -67443019 + AluSc SINE Alu 1 303 -6 988 68 94 233 chr17 22061534 22061710 -67442843 - MER30 DNA MER1_type -98 132 1 499 255 13 110 chr17 22061710 22061812 -67442741 + LTR41 LTR ERVL 722 791 -4 276 326 186 33 chr17 22061814 22062273 -67442280 + L2 LINE L2 2787 3312 -1 549 296 40 20 chr17 22062327 22062580 -67441973 + MIR SINE MIR 2 259 -3 1251 308 35 16 chr17 22066559 22067225 -67437328 - L1MC3 LINE L1 -1629 6156 5479 230 349 28 46 chr17 22071952 22072061 -67432492 + MIR SINE MIR 82 188 -74 1327 173 111 29 chr17 22072455 22072796 -67431757 - THE1C LTR MaLR 0 375 7 467 298 13 20 chr17 22073062 22073234 -67431319 + MIR SINE MIR 3 174 -88 180 415 11 11 chr17 22074336 22074430 -67430123 + MIR SINE MIR 48 141 -67 215 280 0 0 chr17 22076057 22076132 -67428421 + (CCA)n Simple_repeat Simple_repeat 1 75 0 350 276 118 7 chr17 22076919 22077071 -67427482 + MIR3 SINE MIR 33 201 -7 420 268 39 0 chr17 22077150 22077277 -67427276 + MIR SINE MIR 20 151 -111 243 316 90 13 chr17 22077796 22077945 -67426608 - MIR SINE MIR -72 136 11 307 233 25 75 chr17 22077977 22078097 -67426456 - MIR SINE MIR -64 144 31 5557 126 24 73 chr17 22078517 22079537 -67425016 - LTR5 LTR ERVK 0 969 1 443 266 65 0 chr17 22080912 22081036 -67423517 + MIR SINE MIR 88 219 -43 347 269 108 38 chr17 22081061 22081247 -67423306 - L2 LINE L2 -12 3301 3103 203 326 22 56 chr17 22082685 22082774 -67421779 + MIR SINE MIR 61 146 -62 233 234 9 103 chr17 22084056 22084163 -67420390 - MIR SINE MIR -60 148 52 1340 274 106 63 chr17 22088641 22089247 -67415306 - HAL1 LINE L1 -1494 1013 356 1723 104 119 11 chr17 22089247 22089515 -67415038 - AluSc SINE Alu -12 297 1 1340 274 106 63 chr17 22089515 22089782 -67414771 - HAL1 LINE L1 -2151 356 102 417 278 31 63 chr17 22091538 22091729 -67412824 - MIR SINE MIR -50 212 28 220 299 0 0 chr17 22092734 22092821 -67411732 + (TGG)n Simple_repeat Simple_repeat 1 87 0 500 312 40 13 chr17 22093224 22093374 -67411179 - MIR3 SINE MIR -42 166 33 333 315 115 45 chr17 22093885 22094055 -67410498 - MIR3 SINE MIR -20 188 8 226 319 166 47 chr17 22094387 22094556 -67409997 + MER5A DNA MER1_type 1 189 0 801 171 23 0 chr17 22095099 22095228 -67409325 + FLAM_A SINE Alu 2 133 0 241 169 153 0 chr17 22097258 22097317 -67407236 - L2 LINE L2 -1 3271 3204 270 211 42 14 chr17 22097769 22097840 -67406713 - MIR SINE MIR -28 234 162 2159 120 0 0 chr17 22097847 22098146 -67406407 - AluSx SINE Alu -13 299 1 560 290 139 57 chr17 22098192 22098558 -67405995 + L2 LINE L2 2857 3252 -20 346 269 126 8 chr17 22098571 22098690 -67405863 - MIR SINE MIR -123 139 7 2431 64 0 0 chr17 22099743 22100040 -67404513 - AluY SINE Alu -1 310 14 978 239 99 9 chr17 22100874 22101208 -67403345 + MER113 DNA MER1_type? 46 409 -112 725 129 10 0 chr17 22101209 22101310 -67403243 + AluJ/FLAM SINE Alu 1 102 -210 237 331 128 15 chr17 22101757 22101890 -67402663 + L2 LINE L2 3119 3266 -6 298 240 358 6 chr17 22102034 22102213 -67402340 + MIR SINE MIR 1 242 -20 318 248 171 0 chr17 22102660 22102765 -67401788 - L2 LINE L2 -1 3271 3149 855 211 92 90 chr17 22102865 22103287 -67401266 - MER113 DNA MER1_type? -51 470 48 672 258 145 22 chr17 22103629 22103947 -67400606 - L1ME4a LINE L1 -35 6086 5730 243 0 0 0 chr17 22103998 22104025 -67400528 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 729 241 6 13 chr17 22104028 22104186 -67400367 - AluJo SINE Alu -31 281 125 251 250 86 26 chr17 22104193 22104309 -67400244 - L1ME4a LINE L1 -440 5681 5559 1789 143 0 7 chr17 22104547 22104826 -67399727 + AluSx SINE Alu 1 277 -35 192 206 0 0 chr17 22105290 22105324 -67399229 - MER5A DNA MER1_type -155 34 1 281 359 96 13 chr17 22105324 22105480 -67399073 - MIR SINE MIR -81 181 13 430 248 248 21 chr17 22106068 22106306 -67398247 - L2 LINE L2 -1 3312 3021 190 266 0 62 chr17 22106399 22106463 -67398090 - MIR SINE MIR -59 149 93 310 216 221 7 chr17 22106523 22106660 -67397893 - MIR SINE MIR -62 146 16 1911 123 37 0 chr17 22106718 22107018 -67397535 - AluY SINE Alu 0 311 1 483 232 252 0 chr17 22107206 22107357 -67397196 + MER5A DNA MER1_type 1 189 0 300 275 12 12 chr17 22107715 22107795 -67396758 - L2 LINE L2 -5 3308 3229 231 195 0 0 chr17 22107939 22107980 -67396573 - L2 LINE L2 -216 3056 3016 199 262 6 6 chr17 22108034 22108202 -67396351 + (CA)n Simple_repeat Simple_repeat 1 168 0 243 250 12 6 chr17 22108229 22108389 -67396164 + (CA)n Simple_repeat Simple_repeat 1 161 0 359 332 95 43 chr17 22108994 22109205 -67395348 + MIR SINE MIR 28 249 -13 289 327 9 9 chr17 22109472 22109585 -67394968 + L2 LINE L2 2251 2363 -951 984 229 9 0 chr17 22109612 22109826 -67394727 + MER20 DNA MER1_type 4 219 0 1908 122 6 68 chr17 22109884 22110220 -67394333 - MER1B DNA MER1_type -24 315 1 21 71 0 0 chr17 22111227 22111269 -67393284 + AT_rich Low_complexity Low_complexity 1 42 0 2035 107 0 4 chr17 22112810 22113122 -67391431 - AluSc SINE Alu 0 311 1 2187 99 0 29 chr17 22113178 22113490 -67391063 - AluSx SINE Alu -9 303 1 1476 170 52 4 chr17 22114036 22114307 -67390246 - AluJo SINE Alu -26 286 3 247 250 52 73 chr17 22115234 22115330 -67389223 - MIR SINE MIR -7 255 162 446 183 54 0 chr17 22115366 22115459 -67389094 - Charlie1 DNA MER1_type -30 2731 2634 626 209 58 0 chr17 22115473 22115612 -67388941 - Charlie1 DNA MER1_type -2544 217 71 1521 142 0 24 chr17 22115612 22115865 -67388688 + AluJb SINE Alu 1 247 -65 383 311 148 27 chr17 22116040 22116223 -67388330 - MIR SINE MIR -24 238 34 378 223 0 19 chr17 22117041 22117144 -67387409 + L1ME2 LINE L1 6064 6164 0 2056 99 0 57 chr17 22117156 22117470 -67387083 + AluY SINE Alu 1 296 -15 2098 137 0 3 chr17 22117666 22117979 -67386574 + AluSx SINE Alu 1 312 0 1591 151 60 17 chr17 22118937 22119236 -67385317 + AluJo SINE Alu 1 312 0 1839 154 3 39 chr17 22170093 22170405 -67334148 - AluJo SINE Alu -11 301 1 201 269 0 0 chr17 22170802 22170854 -67333699 + MER91B DNA MER1_type 79 130 -60 1595 179 34 10 chr17 22171122 22171418 -67333135 - AluJo SINE Alu -9 303 1 2239 174 21 28 chr17 22171527 22171963 -67332590 + Tigger2a DNA MER2_type 2 434 0 21 0 0 0 chr17 22171993 22172014 -67332539 + AT_rich Low_complexity Low_complexity 1 21 0 2398 64 7 3 chr17 22172103 22172400 -67332153 + AluY SINE Alu 1 298 -13 779 315 83 15 chr17 22172462 22172871 -67331682 - L3 LINE CR1 -11 1566 1130 520 323 6 12 chr17 22172872 22173036 -67331517 - L1MEc LINE L1 -6086 310 148 705 272 177 15 chr17 22173157 22173693 -67330860 + L1M4 LINE L1 4027 4649 -1497 2310 95 3 3 chr17 22173703 22173998 -67330555 + AluY SINE Alu 1 295 -16 269 299 23 11 chr17 22173998 22174172 -67330381 + L1M4 LINE L1 4740 4915 -1231 687 272 30 41 chr17 22174205 22174554 -67329999 - MLT1I LTR MaLR 0 450 60 271 305 93 7 chr17 22174625 22174776 -67329777 + L1M4 LINE L1 4962 5125 -1021 423 339 18 4 chr17 22174902 22175129 -67329424 + L1M4 LINE L1 4824 5053 -1093 1078 138 6 0 chr17 22175245 22175405 -67329148 + AluSx SINE Alu 1 161 -151 2089 109 20 3 chr17 22175497 22175790 -67328763 - AluSx SINE Alu -14 298 1 2293 96 13 0 chr17 22175790 22176093 -67328460 - AluSx SINE Alu -5 307 1 2732 42 0 0 chr17 22176099 22176405 -67328148 - AluY SINE Alu -5 306 1 240 290 0 0 chr17 22176492 22176554 -67327999 - L2 LINE L2 -347 2925 2864 216 0 0 0 chr17 22176554 22176578 -67327975 + (TG)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr17 22176719 22176740 -67327813 + AT_rich Low_complexity Low_complexity 1 21 0 310 343 9 0 chr17 22177669 22177774 -67326779 - L2 LINE L2 -11 3302 3197 1806 184 23 20 chr17 22177788 22178135 -67326418 + MLT2C1 LTR ERVL 1 348 -49 366 23 0 0 chr17 22178136 22178179 -67326374 + (TG)n Simple_repeat Simple_repeat 1 43 0 451 271 58 26 chr17 22178306 22178461 -67326092 + MIR SINE MIR 37 196 -66 212 292 101 11 chr17 22178478 22178567 -67325986 - MIR SINE MIR -150 112 16 296 294 23 0 chr17 22178824 22178927 -67325626 + MIR SINE MIR 55 160 -48 1471 137 64 6 chr17 22179423 22179732 -67324821 + LTR54 LTR ERV1 1 376 -134 249 143 159 32 chr17 22179759 22179822 -67324731 + MER57A LTR ERV1 330 400 -3 338 219 0 0 chr17 22180028 22180101 -67324452 - MIR SINE MIR -15 247 175 2817 212 32 14 chr17 22180484 22181097 -67323456 - L1M4 LINE L1 -2887 3259 2630 2115 108 31 0 chr17 22181097 22181384 -67323169 - AluSx SINE Alu -15 297 2 2817 212 32 14 chr17 22181384 22181496 -67323057 - L1M4 LINE L1 -3516 2630 2521 2054 189 32 18 chr17 22181772 22182212 -67322341 + L1MB5 LINE L1 652 1097 -5445 610 224 9 9 chr17 22182212 22182328 -67322225 + FLAM_C SINE Alu 2 117 -26 2209 124 0 3 chr17 22182355 22182654 -67321899 + AluSx SINE Alu 1 298 -14 27 49 0 0 chr17 22182654 22182695 -67321858 + AT_rich Low_complexity Low_complexity 1 41 0 646 200 39 0 chr17 22182699 22182854 -67321699 + L1MB5 LINE L1 1079 1239 -5303 1338 181 38 52 chr17 22182858 22182903 -67321650 + L1MB5 LINE L1 4895 4939 -1705 1415 172 67 50 chr17 22182903 22183200 -67321353 + AluJo SINE Alu 1 302 -10 1338 181 38 52 chr17 22183200 22183499 -67321054 + L1MB5 LINE L1 4939 5236 -1408 2291 92 3 23 chr17 22183499 22183803 -67320750 + AluSg1 SINE Alu 1 298 -11 1338 181 38 52 chr17 22183803 22183822 -67320731 + L1MB5 LINE L1 5236 5254 -1390 2258 100 3 7 chr17 22183824 22184123 -67320430 + AluSp SINE Alu 1 298 -15 1709 124 80 29 chr17 22184136 22184411 -67320142 + AluSq SINE Alu 7 295 -18 936 118 14 35 chr17 22184419 22184563 -67319990 + AluSx SINE Alu 1 141 -171 1547 190 0 0 chr17 22184563 22184810 -67319743 - AluJb SINE Alu -65 247 1 1268 182 42 29 chr17 22184816 22184874 -67319679 + L1MB5 LINE L1 5587 5643 -1001 1978 73 23 8 chr17 22184874 22185135 -67319418 + AluSg SINE Alu 41 305 -5 1268 182 42 29 chr17 22185135 22185383 -67319170 + L1MB5 LINE L1 5643 5897 -747 1262 68 0 0 chr17 22185383 22185555 -67318998 + AluSx SINE Alu 136 307 0 378 0 0 0 chr17 22185554 22185596 -67318957 + (CA)n Simple_repeat Simple_repeat 2 43 0 574 130 0 22 chr17 22185601 22185693 -67318860 + FLAM_A SINE Alu 43 132 -10 904 161 32 63 chr17 22185693 22186130 -67318423 + L1MB5 LINE L1 5890 6361 -311 2148 127 0 0 chr17 22186130 22186413 -67318140 + AluSg SINE Alu 1 283 -27 904 161 32 63 chr17 22186413 22186710 -67317843 + L1MB5 LINE L1 6361 6666 -6 738 151 7 50 chr17 22187674 22187813 -67316740 + AluJo SINE Alu 2 134 -178 2463 97 0 0 chr17 22187815 22188126 -67316427 + AluSp SINE Alu 1 311 -2 23 0 0 0 chr17 22188126 22188149 -67316404 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr17 22188922 22188943 -67315610 + AT_rich Low_complexity Low_complexity 1 21 0 7170 58 6 46 chr17 22189434 22190802 -67313751 + SVA Other Other 433 1386 0 318 295 108 35 chr17 22190802 22191060 -67313493 + L1MEd LINE L1 874 1150 -4969 1283 136 48 19 chr17 22191113 22191319 -67313234 + AluSx SINE Alu 1 212 -100 1156 196 85 91 chr17 22191331 22191406 -67313147 + HsTC2 DNA Tc2 228 302 -1596 2371 93 6 3 chr17 22191406 22191718 -67312835 + AluSp SINE Alu 1 313 0 1156 196 85 91 chr17 22191718 22191984 -67312569 + HsTC2 DNA Tc2 302 567 -1331 2461 64 0 10 chr17 22191984 22192282 -67312271 + AluY SINE Alu 1 295 -16 273 247 14 0 chr17 22192300 22192373 -67312180 + HsTC2 DNA Tc2 621 694 -1204 254 128 0 0 chr17 22192381 22192420 -67312133 + HsTC2 DNA Tc2 1266 1304 -594 413 219 53 18 chr17 22192424 22192538 -67312015 + HsTC2 DNA Tc2 1777 1894 -4 939 154 0 0 chr17 22192619 22192755 -67311798 + AluSq/x SINE Alu 1 136 -176 2426 86 3 0 chr17 22192755 22193059 -67311494 + AluSp SINE Alu 1 305 -8 542 149 93 0 chr17 22193073 22193180 -67311373 + AluSg/x SINE Alu 193 309 0 1575 169 29 38 chr17 22193212 22193525 -67311028 - AluJb SINE Alu -2 310 1 1877 96 82 34 chr17 22193971 22194263 -67310290 + AluSg SINE Alu 1 306 -4 445 174 96 0 chr17 22194393 22194509 -67310044 + L1 LINE L1 3805 3951 -2195 1899 178 3 0 chr17 22195123 22195427 -67309126 - AluJo SINE Alu -7 305 1 1946 102 26 0 chr17 22195540 22195805 -67308748 + AluSx SINE Alu 29 300 -12 1240 129 0 0 chr17 22195812 22195983 -67308570 + AluSg/x SINE Alu 132 302 -10 1970 169 0 0 chr17 22196096 22196403 -67308150 + AluSx SINE Alu 1 307 -5 2162 70 52 0 chr17 22196422 22196715 -67307838 + AluSp SINE Alu 1 307 0 329 235 191 0 chr17 22196886 22196954 -67307599 + FRAM/FAM SINE Alu 3 83 -92 * 336 272 25 0 chr17 22196933 22197014 -67307539 - AluJ/FLAM SINE Alu -219 83 1 1548 212 20 0 chr17 22197050 22197352 -67307201 + AluJo SINE Alu 1 308 -4 382 238 228 10 chr17 22198131 22198337 -67306216 + L2 LINE L2 2010 2260 -1054 825 260 82 30 chr17 22198342 22198780 -67305773 + L2 LINE L2 2852 3312 -1 2143 92 3 3 chr17 22199111 22199395 -67305158 - AluSp SINE Alu -9 304 21 2116 118 28 0 chr17 22199395 22199684 -67304869 - AluSg SINE Alu -13 297 1 1973 157 0 3 chr17 22199684 22199984 -67304569 - AluSx SINE Alu -13 299 1 1658 174 3 10 chr17 22201083 22201371 -67303182 + AluJo SINE Alu 23 308 -4 1805 106 17 0 chr17 22201760 22201996 -67302557 + AluSp SINE Alu 1 240 -73 230 167 0 0 chr17 22202098 22202146 -67302407 + Alu SINE Alu 83 130 -3 1308 184 0 107 chr17 22202150 22202487 -67302066 + AluJb SINE Alu 1 301 -1 741 187 8 15 chr17 22202967 22203101 -67301452 + FLAM_C SINE Alu 1 133 0 259 241 84 0 chr17 22203137 22203220 -67301333 - MIR SINE MIR -6 256 167 2353 90 0 13 chr17 22203323 22203634 -67300919 - AluSq SINE Alu -6 307 1 1596 153 81 0 chr17 22203687 22203969 -67300584 - AluJb SINE Alu 0 305 3 690 252 139 54 chr17 22204753 22205198 -67299355 + L2 LINE L2 2827 3309 -4 2198 98 18 0 chr17 22205257 22205543 -67299010 - AluY SINE Alu -20 291 1 283 220 0 0 chr17 22205581 22205640 -67298913 + L2 LINE L2 3210 3268 -4 29 28 0 0 chr17 22205743 22205779 -67298774 + AT_rich Low_complexity Low_complexity 1 36 0 2248 103 0 3 chr17 22206681 22206972 -67297581 + AluSc SINE Alu 1 290 -19 2201 109 3 0 chr17 22207235 22207529 -67297024 + AluSg SINE Alu 1 295 -15 2155 102 12 50 chr17 22207672 22207994 -67296559 + AluSq SINE Alu 1 310 -3 2273 98 0 3 chr17 22207999 22208342 -67296211 + AluSx SINE Alu 8 349 0 787 232 185 31 chr17 22208435 22208694 -67295859 + AluSg SINE Alu 1 299 -1 2257 85 3 0 chr17 22208707 22209033 -67295520 + AluY SINE Alu 2 328 0 485 334 81 22 chr17 22209442 22209638 -67294915 - L3 LINE CR1 -2 1575 1392 2007 128 7 0 chr17 22209638 22209942 -67294611 + AluSx SINE Alu 1 306 0 485 334 81 22 chr17 22209942 22210151 -67294402 - L3 LINE CR1 -185 1392 1145 2492 87 3 0 chr17 22210332 22210643 -67293910 - AluSp SINE Alu -1 312 1 262 265 94 34 chr17 22211274 22211391 -67293162 + L2 LINE L2 3184 3307 -6 2077 113 17 10 chr17 22211470 22211770 -67292783 + AluSx SINE Alu 1 302 -10 2288 88 10 3 chr17 22211786 22212082 -67292471 + AluSg SINE Alu 5 302 -8 236 330 43 0 chr17 22212264 22212379 -67292174 - MIR SINE MIR -77 185 66 202 293 12 0 chr17 22213522 22213604 -67290949 + C-rich Low_complexity Low_complexity 6 88 0 * 225 196 22 0 chr17 22213563 22213609 -67290944 + (CCCCAG)n Simple_repeat Simple_repeat 2 48 0 546 282 117 24 chr17 22213944 22214106 -67290447 + MIR SINE MIR 21 208 -54 2290 62 0 28 chr17 22214106 22214420 -67290133 + AluSg SINE Alu 1 306 0 546 282 117 24 chr17 22214420 22214462 -67290091 + MIR SINE MIR 208 245 -17 2372 82 0 3 chr17 22214577 22214871 -67289682 - AluSx SINE Alu -19 293 1 549 244 86 38 chr17 22215021 22215230 -67289323 - MIR SINE MIR -39 223 5 330 250 222 45 chr17 22215614 22215970 -67288583 + MLT1K LTR MaLR 146 564 -24 265 242 118 79 chr17 22216188 22216366 -67288187 + L2 LINE L2 3115 3299 -14 297 183 0 17 chr17 22216390 22216450 -67288103 + MER63 DNA MER1_type 772 830 -230 928 149 58 0 chr17 22216476 22216630 -67287923 - AluJo SINE Alu -30 282 120 255 253 22 99 chr17 22216686 22216868 -67287685 - HAL1 LINE L1 -2239 268 101 570 216 116 25 chr17 22216869 22217068 -67287485 + MLT1F LTR MaLR 307 523 -19 230 250 61 45 chr17 22217485 22217592 -67286961 + MIR SINE MIR 78 183 -63 2288 128 0 0 chr17 22217824 22218136 -67286417 - AluSx SINE Alu 0 312 1 874 132 7 0 chr17 22218186 22218322 -67286231 - AluSg/x SINE Alu -15 297 161 594 268 48 0 chr17 22218546 22218714 -67285839 + MIR SINE MIR 20 195 -67 470 256 129 3 chr17 22218864 22219037 -67285516 - L1ME LINE L1 -460 5661 5468 2208 108 0 31 chr17 22219088 22219411 -67285142 + AluSq SINE Alu 1 313 0 285 308 67 0 chr17 22219476 22219580 -67284973 - L2 LINE L2 0 3313 3203 21 0 0 0 chr17 22219660 22219681 -67284872 + AT_rich Low_complexity Low_complexity 1 21 0 2445 76 3 0 chr17 22219707 22220008 -67284545 + AluSp SINE Alu 1 302 -11 2008 118 17 17 chr17 22220024 22220312 -67284241 + AluSx SINE Alu 1 288 -24 285 185 179 0 chr17 22220323 22220419 -67284134 + MIR SINE MIR 57 167 -68 329 209 230 97 chr17 22221171 22221367 -67283186 - MLT1K LTR MaLR 0 588 367 3844 229 75 36 chr17 22221484 22221682 -67282871 - L1M4c LINE L1 -3889 2936 2747 2168 108 7 10 chr17 22221682 22221979 -67282574 - AluSx SINE Alu -16 296 1 3844 229 75 36 chr17 22221979 22222637 -67281916 - L1M4c LINE L1 -4078 2747 2116 1754 170 35 0 chr17 22222637 22222919 -67281634 - AluJb SINE Alu -16 296 5 3844 229 75 36 chr17 22222919 22224611 -67279942 - L1M4c LINE L1 -4709 2116 14 1096 247 84 38 chr17 22224919 22225369 -67279184 - MER20B DNA MER1_type -1 782 312 1852 251 49 19 chr17 22225427 22225957 -67278596 - MER90 LTR ERV1 0 614 69 427 269 42 17 chr17 22225988 22226107 -67278446 - MER20B DNA MER1_type -542 241 120 297 200 80 40 chr17 22226109 22226184 -67278369 - MLT1J2 LTR MaLR -306 144 67 208 237 99 84 chr17 22226218 22226349 -67278204 + MIR SINE MIR 75 207 -55 465 19 0 0 chr17 22226431 22226485 -67278068 + (CA)n Simple_repeat Simple_repeat 2 55 0 2251 110 3 0 chr17 22226559 22226859 -67277694 + AluSp SINE Alu 1 301 -12 1407 247 70 15 chr17 22226994 22227398 -67277155 + MLT1G1 LTR MaLR 1 354 -176 437 219 86 0 chr17 22227394 22227499 -67277054 + MLT1G1 LTR MaLR 465 578 -12 * 888 281 126 52 chr17 22227676 22227783 -67276770 - MLT1J LTR MaLR 0 511 413 2086 123 10 7 chr17 22227783 22228075 -67276478 + AluSq SINE Alu 2 294 -19 888 281 126 52 chr17 22228075 22228443 -67276110 - MLT1J LTR MaLR -98 413 1 2625 39 13 0 chr17 22230182 22230487 -67274066 + AluY SINE Alu 1 309 -2 2299 107 0 0 chr17 22230678 22230976 -67273577 + AluY SINE Alu 1 298 -13 379 154 0 64 chr17 22231626 22231704 -67272849 - L2 LINE L2 -2 3270 3198 1185 174 82 0 chr17 22232159 22232366 -67272187 - MER58A DNA MER1_type 0 224 1 2420 85 0 3 chr17 22233314 22233620 -67270933 - AluY SINE Alu -1 310 6 1114 72 0 0 chr17 22233630 22233769 -67270784 + MER85 DNA T2_type 1 139 0 194 272 206 22 chr17 22234436 22234616 -67269937 + L2 LINE L2 3038 3250 -63 335 287 93 28 chr17 22234665 22234912 -67269641 + HAL1b LINE L1 62 324 -1024 542 242 78 0 chr17 22234959 22235112 -67269441 + HAL1b LINE L1 401 565 -783 408 245 69 73 chr17 22235143 22235376 -67269177 + HAL1b LINE L1 666 897 -451 23 0 0 0 chr17 22235858 22235881 -67268672 + AT_rich Low_complexity Low_complexity 1 23 0 2389 98 0 0 chr17 22235881 22236177 -67268376 + AluSg SINE Alu 1 296 -14 2770 201 41 60 chr17 22236220 22237117 -67267436 - L1MDa LINE L1 -4402 2138 1259 2974 0 0 0 chr17 22237139 22237479 -67267074 + AluY SINE Alu 1 340 0 21 0 0 0 chr17 22237681 22237702 -67266851 + AT_rich Low_complexity Low_complexity 1 21 0 1966 103 0 94 chr17 22237859 22237989 -67266564 + AluSx SINE Alu 14 155 -157 2289 114 13 0 chr17 22237989 22238297 -67266256 + AluSx SINE Alu 1 312 0 1966 103 0 94 chr17 22238297 22238477 -67266076 + AluSx SINE Alu 155 296 -16 2526 93 0 0 chr17 22238477 22238788 -67265765 + AluSx SINE Alu 1 311 -1 2332 100 10 0 chr17 22238961 22239270 -67265283 + AluSp SINE Alu 1 312 -1 302 245 68 68 chr17 22239298 22239461 -67265092 + L1MDa LINE L1 2441 2603 -3937 1480 101 10 10 chr17 22239472 22239679 -67264874 + AluSc SINE Alu 1 207 -102 2530 63 0 0 chr17 22239784 22240083 -67264470 - AluY SINE Alu -12 299 1 322 250 24 24 chr17 22240099 22240183 -67264370 - MLT1K LTR MaLR -92 496 413 507 33 0 0 chr17 22240619 22240680 -67263873 + (TA)n Simple_repeat Simple_repeat 2 62 0 3226 178 13 7 chr17 22241134 22241689 -67262864 - MER68 LTR ERV1 -4 558 1 2899 226 76 25 chr17 22241885 22242717 -67261836 + L1MC4 LINE L1 6694 7567 -475 480 77 0 0 chr17 22243629 22243694 -67260859 + (TA)n Simple_repeat Simple_repeat 2 66 0 2380 69 3 20 chr17 22244069 22244375 -67260178 - AluY SINE Alu -6 305 5 629 289 83 49 chr17 22244547 22244896 -67259657 + MLT1K LTR MaLR 75 435 -153 2161 74 70 0 chr17 22245340 22245611 -67258942 - AluSc SINE Alu -19 290 1 2226 102 7 0 chr17 22245830 22246125 -67258428 - AluSp SINE Alu -16 297 1 410 269 77 66 chr17 22247017 22247199 -67257354 - MIR SINE MIR -56 206 23 2314 86 0 10 chr17 22247407 22247709 -67256844 - AluSq SINE Alu -14 299 1 2310 100 25 0 chr17 22247709 22248030 -67256523 - L1P4 LINE L1 -394 5772 5444 306 289 283 11 chr17 22248448 22248635 -67255918 - MIR SINE MIR -11 251 14 949 222 93 15 chr17 22248706 22248976 -67255577 - L1M4 LINE L1 -1736 4410 4120 206 118 0 0 chr17 22248978 22249012 -67255541 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 211 157 56 56 chr17 22249319 22249427 -67255126 + (GCTTG)n Simple_repeat Simple_repeat 4 111 0 948 62 0 0 chr17 22250175 22250288 -67254265 + AluSg SINE Alu 1 113 -197 1669 140 4 0 chr17 22250464 22250707 -67253846 + AluSx SINE Alu 61 304 -8 2154 104 0 57 chr17 22250718 22251034 -67253519 + AluY SINE Alu 1 298 -13 1975 47 0 8 chr17 22251036 22251272 -67253281 + AluY SINE Alu 1 234 -77 353 94 506 0 chr17 22251216 22251301 -67253252 + AluYb8 SINE Alu 179 306 -2 501 297 148 58 chr17 22251309 22251843 -67252710 - L1M4 LINE L1 -2387 3759 3274 2177 109 0 7 chr17 22251843 22252126 -67252427 - AluSx SINE Alu -31 281 1 501 297 148 58 chr17 22252126 22252510 -67252043 - L1M4 LINE L1 -2872 3274 2786 1082 177 51 55 chr17 22252516 22252777 -67251776 + MER33 DNA MER1_type 1 262 -2323 2467 60 0 3 chr17 22252777 22253075 -67251478 + AluY SINE Alu 1 297 -14 1082 177 51 55 chr17 22253075 22253124 -67251429 + MER33 DNA MER1_type 262 310 -14 265 290 43 38 chr17 22253181 22253405 -67251148 - L1M4 LINE L1 -3404 2742 2517 1487 191 141 45 chr17 22253457 22253887 -67250666 + L1MDb LINE L1 16 403 -6006 420 37 0 0 chr17 22253887 22253941 -67250612 + (CA)n Simple_repeat Simple_repeat 2 55 0 1487 191 141 45 chr17 22253941 22254464 -67250089 + L1MDb LINE L1 403 1116 -5293 354 310 0 0 chr17 22254464 22254626 -67249927 - AluY SINE Alu 0 334 173 2326 85 7 26 chr17 22255208 22255514 -67249039 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr17 22259963 22259984 -67244569 + GC_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr17 22260068 22260090 -67244463 + (CCG)n Simple_repeat Simple_repeat 2 23 0 622 233 27 53 chr17 22260216 22260312 -67244241 + Charlie1 DNA MER1_type 2506 2603 -158 783 188 0 0 chr17 22260312 22260445 -67244108 - FLAM_C SINE Alu 0 133 1 622 233 27 53 chr17 22260445 22260610 -67243943 + Charlie1 DNA MER1_type 2603 2760 -1 382 330 142 42 chr17 22260613 22261262 -67243291 - L2 LINE L2 -436 2878 2165 2473 64 0 3 chr17 22261378 22261673 -67242880 + AluY SINE Alu 2 295 -16 715 239 61 0 chr17 22261773 22261953 -67242600 + MER58A DNA MER1_type 30 220 -4 399 279 33 16 chr17 22261955 22262077 -67242476 + MER102a DNA MER1_type 205 328 -2 315 325 105 4 chr17 22262622 22262850 -67241703 + L1ME3A LINE L1 4738 4988 -1158 25 51 0 0 chr17 22262934 22262973 -67241580 + AT_rich Low_complexity Low_complexity 1 39 0 462 233 96 44 chr17 22262991 22263300 -67241253 + L1ME3A LINE L1 5189 5503 -659 351 256 15 58 chr17 22263437 22263574 -67240979 + L1ME3A LINE L1 5769 5899 -271 1138 96 0 13 chr17 22263720 22263877 -67240676 - AluSg/x SINE Alu 0 310 156 2134 147 70 0 chr17 22263977 22264351 -67240202 + L1MA4A LINE L1 5894 6293 -10 190 286 0 0 chr17 22264394 22264450 -67240103 - L2 LINE L2 0 3313 3258 2674 43 3 0 chr17 22265159 22265464 -67239089 - AluY SINE Alu -5 306 1 360 290 180 5 chr17 22265618 22265835 -67238718 - HAL1 LINE L1 -1013 1494 1240 1410 233 108 12 chr17 22266299 22266773 -67237780 - MLT1E LTR MaLR -15 578 21 453 347 76 18 chr17 22266819 22267162 -67237391 - L2 LINE L2 -561 2753 2391 223 264 83 58 chr17 22268845 22268966 -67235587 - MER5A DNA MER1_type -22 167 44 2129 128 3 0 chr17 22269952 22270249 -67234304 + AluY SINE Alu 1 298 -13 2243 102 14 0 chr17 22270343 22270638 -67233915 + AluSx SINE Alu 1 299 -13 575 306 120 73 chr17 22270844 22271361 -67233192 - MLT1K LTR MaLR -2 586 46 213 121 0 0 chr17 22272146 22272179 -67232374 + (T)n Simple_repeat Simple_repeat 1 33 0 647 286 35 5 chr17 22272830 22273033 -67231520 - L1ME LINE L1 -514 5648 5440 1133 75 0 0 chr17 22273088 22273221 -67231332 + AluSq/x SINE Alu 1 133 -180 1894 128 23 7 chr17 22273353 22273659 -67230894 + AluY SINE Alu 1 311 0 973 327 72 28 chr17 22273705 22274360 -67230193 + L2 LINE L2 2019 2702 -612 794 186 0 0 chr17 22274372 22274501 -67230052 - FLAM_C SINE Alu 0 133 5 401 253 24 41 chr17 22274516 22274536 -67230017 - L1MA10 LINE L1 -2 6332 6313 1809 211 18 23 chr17 22274536 22274976 -67229577 - L1ME2 LINE L1 -9 6224 5787 332 248 43 34 chr17 22274979 22275096 -67229457 - L1ME2 LINE L1 -3992 2404 2287 1721 224 89 36 chr17 22275221 22275668 -67228885 + Charlie1a DNA MER1_type 1 471 -984 434 179 73 24 chr17 22275679 22275802 -67228751 - MER69 DNA AcHobo -206 2320 2192 770 138 40 13 chr17 22275910 22276062 -67228491 - L1MC3 LINE L1 -97 7688 7533 956 293 20 9 chr17 22276185 22276526 -67228027 - L1ME2 LINE L1 -6016 380 36 449 274 132 27 chr17 22276541 22276760 -67227793 + L2 LINE L2 2702 2943 -371 283 220 120 25 chr17 22277026 22277366 -67227187 + L1MC4a LINE L1 5254 5661 -460 325 259 56 5 chr17 22277382 22277579 -67226974 + L1MC4a LINE L1 5707 5824 -297 1193 170 9 5 chr17 22277903 22278115 -67226438 - MER20 DNA MER1_type -5 214 2 248 360 40 0 chr17 22278679 22278779 -67225774 + MIR3 SINE MIR 94 197 -11 1560 183 18 14 chr17 22280571 22280874 -67223679 + AluJo SINE Alu 2 305 0 2460 76 0 0 chr17 22282205 22282496 -67222057 + AluSc SINE Alu 3 293 -16 626 218 116 88 chr17 22282557 22282910 -67221643 + LTR52 LTR ERVL 1 363 -58 498 196 14 7 chr17 22283830 22283968 -67220585 + (TA)n Simple_repeat Simple_repeat 2 140 0 487 298 28 86 chr17 22284035 22284193 -67220360 + L2 LINE L2 2174 2340 -974 982 145 177 0 chr17 22284193 22284379 -67220174 - MER20 DNA MER1_type 0 219 1 487 298 28 86 chr17 22284379 22284524 -67220029 + L2 LINE L2 2340 2451 -863 2659 42 0 3 chr17 22284524 22284831 -67219722 - AluY SINE Alu -5 306 1 487 298 28 86 chr17 22284831 22284922 -67219631 + L2 LINE L2 2451 2546 -768 2561 56 0 7 chr17 22286032 22286334 -67218219 + AluY SINE Alu 1 300 -11 1040 229 136 37 chr17 22286449 22286824 -67217729 + MLT1J1 LTR MaLR 15 426 -20 2721 48 0 0 chr17 22287373 22287684 -67216869 + AluY SINE Alu 1 311 0 220 271 29 14 chr17 22288978 22289048 -67215505 - MIR3 SINE MIR -17 191 121 312 193 80 23 chr17 22289221 22289309 -67215244 + L2 LINE L2 3180 3272 0 462 265 176 20 chr17 22289688 22289892 -67214661 + MIR SINE MIR 22 257 -5 190 291 154 0 chr17 22291165 22291275 -67213278 + MIR3 SINE MIR 4 130 -78 356 253 71 18 chr17 22291311 22291481 -67213072 - MIR SINE MIR 0 262 84 293 208 62 21 chr17 22292042 22292138 -67212415 + AluYb8 SINE Alu 209 308 0 2163 82 14 10 chr17 22292177 22292470 -67212083 - AluSx SINE Alu -18 294 1 1343 122 56 49 chr17 22292470 22292710 -67211843 - L1M2c LINE L1 -4824 1965 1721 2390 65 0 62 chr17 22292710 22293033 -67211520 - AluY SINE Alu -8 303 1 1343 122 56 49 chr17 22293033 22293080 -67211473 - L1M2c LINE L1 -5068 1721 1676 1398 104 5 5 chr17 22293180 22293373 -67211180 + AluSq SINE Alu 104 296 -17 5306 238 20 52 chr17 22293374 22295085 -67209468 - L1M2c LINE L1 -5353 1436 14 2358 102 3 0 chr17 22295308 22295611 -67208942 + AluSx SINE Alu 1 304 -8 2062 99 0 64 chr17 22295622 22295936 -67208617 + AluY SINE Alu 1 294 -17 2139 81 19 42 chr17 22297878 22298186 -67206367 - AluY SINE Alu -10 301 1 1199 280 142 20 chr17 22298935 22299428 -67205125 + MLT1G1 LTR MaLR 2 595 0 349 250 0 25 chr17 22299804 22299884 -67204669 + Tigger5 DNA MER2_type 2 79 -2244 246 282 0 14 chr17 22299902 22299973 -67204580 - Tigger5 DNA MER2_type -5 2318 2249 872 235 5 0 chr17 22301133 22301343 -67203210 + L1MA5 LINE L1 13 581 -6628 6599 233 80 28 chr17 22301435 22303372 -67201181 + L1MA5 LINE L1 841 2675 -4533 1826 162 0 13 chr17 22303372 22303687 -67200866 + AluSx SINE Alu 1 311 -1 6599 233 80 28 chr17 22303687 22304212 -67200341 + L1MA5 LINE L1 2675 3171 -4037 182 37 37 0 chr17 22304212 22304239 -67200314 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 6599 233 80 28 chr17 22304239 22305474 -67199079 + L1MA5 LINE L1 3171 4809 -2399 1315 200 33 87 chr17 22305465 22305946 -67198607 + L1MA5 LINE L1 5218 5672 -1536 * 1092 332 31 38 chr17 22305967 22306581 -67197972 + L1PA13 LINE L1 1 610 -6177 338 323 6 49 chr17 22306579 22306743 -67197810 + L1PA13 LINE L1 1363 1519 -5268 * 2316 127 0 12 chr17 22306842 22307180 -67197373 - MER1B DNA MER1_type 0 337 4 7493 243 49 52 chr17 22307843 22310229 -67194324 + L1PA16 LINE L1 1362 3755 -3042 222 37 0 0 chr17 22310229 22310256 -67194297 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 7493 243 49 52 chr17 22310256 22311046 -67193507 + L1PA16 LINE L1 3755 4685 -2112 708 195 0 47 chr17 22311046 22311195 -67193358 + FLAM_C SINE Alu 2 143 0 7493 243 49 52 chr17 22311195 22311731 -67192822 + L1PA16 LINE L1 4685 5222 -1575 348 270 121 6 chr17 22312202 22312376 -67192177 - LTR33A LTR ERVL -7 516 323 435 245 182 0 chr17 22312463 22312622 -67191931 - LTR50 LTR ERVL -607 188 1 180 0 0 0 chr17 22313534 22313554 -67190999 + (A)n Simple_repeat Simple_repeat 1 20 0 4765 149 21 30 chr17 22313554 22315190 -67189363 + L1PA16 LINE L1 5200 6816 -1 3723 178 27 47 chr17 22315232 22316264 -67188289 + L1MA5 LINE L1 5662 6670 -692 2729 141 23 51 chr17 22316656 22317187 -67187366 + L1MA5 LINE L1 6655 7170 -192 1066 130 0 6 chr17 22317187 22317349 -67187204 - AluSg/x SINE Alu -16 294 134 862 147 40 6 chr17 22317359 22317536 -67187017 + L1MA5 LINE L1 7180 7362 0 436 230 0 0 chr17 22317539 22317626 -67186927 + AluJb SINE Alu 136 222 -90 1091 278 47 23 chr17 22319191 22319662 -67184891 + L1MC4 LINE L1 7556 8037 -5 2124 78 0 0 chr17 22319826 22320142 -67184411 - AluY SINE Alu 0 316 1 1924 65 34 71 chr17 22320169 22320492 -67184061 - AluY SINE Alu 0 311 1 1216 78 0 12 chr17 22320662 22320829 -67183724 - AluSp SINE Alu -7 306 142 1868 114 0 14 chr17 22320829 22321110 -67183443 - AluSq SINE Alu -36 277 1 424 298 73 29 chr17 22321115 22321320 -67183233 + L1ME3A LINE L1 5360 5573 -589 1050 122 37 16 chr17 22321434 22321623 -67182930 - L1MA8 LINE L1 -71 6220 6028 1230 280 50 43 chr17 22321642 22321867 -67182686 + L1ME3A LINE L1 5600 5822 -348 2278 82 0 7 chr17 22321867 22322172 -67182381 + AluY SINE Alu 1 303 -8 1230 280 50 43 chr17 22322172 22322503 -67182050 + L1ME3A LINE L1 5822 6160 -10 614 234 101 20 chr17 22323091 22323377 -67181176 - MLT2F LTR ERVL -86 577 204 297 0 0 0 chr17 22323380 22323413 -67181140 + (TG)n Simple_repeat Simple_repeat 1 33 0 226 225 0 38 chr17 22324309 22324389 -67180164 - HSAT5 Satellite Satellite -7 79 3 239 314 14 0 chr17 22324796 22324866 -67179687 + (CACG)n Simple_repeat Simple_repeat 2 72 0 258 145 16 65 chr17 22325166 22325228 -67179325 - SN5 Other centromeric -77 378 320 286 195 0 23 chr17 22325677 22325764 -67178789 - HSAT5 Satellite Satellite -1 85 1 313 213 6 30 chr17 22325810 22325911 -67178642 - HSAT5 Satellite Satellite -4 98 1 237 170 11 138 chr17 22326658 22326752 -67177801 - SN5 Other centromeric -77 378 297 198 0 0 0 chr17 22331298 22331320 -67173233 + (TTCC)n Simple_repeat Simple_repeat 1 22 0 961 312 48 31 chr17 22331870 22332537 -67172016 + L1MC3 LINE L1 5479 6156 -1629 212 314 13 33 chr17 22334458 22334611 -67169942 + (CGGG)n Simple_repeat Simple_repeat 3 152 0 28 0 0 0 chr17 22335659 22335687 -67168866 + AT_rich Low_complexity Low_complexity 1 28 0 840 212 20 6 chr17 22335786 22336088 -67168465 - MLT1A2 LTR MaLR 0 374 1 698 172 83 30 chr17 22336622 22336791 -67167762 + MER3 DNA MER1_type 19 196 -13 2064 119 23 0 chr17 22336986 22337288 -67167265 + AluSg SINE Alu 1 309 -1 1041 98 7 0 chr17 22337361 22337514 -67167039 - AluSg/x SINE Alu 0 312 159 1491 199 0 3 chr17 22337598 22337889 -67166664 - AluJb SINE Alu -18 294 5 22 70 0 0 chr17 22338136 22338179 -67166374 + AT_rich Low_complexity Low_complexity 1 43 0 2048 105 7 3 chr17 22338185 22338481 -67166072 - AluSx SINE Alu -15 297 1 189 74 0 0 chr17 22338750 22338777 -67165776 + (CA)n Simple_repeat Simple_repeat 2 28 0 1054 133 0 0 chr17 22339505 22339663 -67164890 + AluSp SINE Alu 138 295 -18 194 0 39 0 chr17 22340327 22340353 -67164200 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1655 155 0 0 chr17 22340677 22340935 -67163618 - AluJb SINE Alu -54 258 1 1175 166 9 37 chr17 22340968 22341185 -67163368 + AluJb SINE Alu 77 287 -25 308 287 66 29 chr17 22341832 22341968 -67162585 - Charlie8 DNA MER1_type -2276 141 1 188 333 234 12 chr17 22341970 22342141 -67162412 + MIR SINE MIR 36 244 -18 197 333 48 12 chr17 22342288 22342372 -67162181 + MER5A DNA MER1_type 1 87 -102 195 200 22 22 chr17 22342431 22342476 -67162077 - MER5A DNA MER1_type -105 84 40 2141 98 3 0 chr17 22343014 22343352 -67161201 - AluSp SINE Alu 0 339 1 974 104 0 0 chr17 22343360 22343495 -67161058 - AluSp/q SINE Alu -22 291 157 400 143 0 0 chr17 22344801 22344857 -67159696 + AluJ/FLAM SINE Alu 2 57 -245 2472 127 27 11 chr17 22344857 22345484 -67159069 + L1P4 LINE L1 5000 5636 -529 797 206 0 0 chr17 22345485 22345655 -67158898 - L1P LINE L1 -1253 4893 4724 479 191 0 0 chr17 22345652 22345746 -67158807 + L1 LINE L1 4595 4688 -1458 * 843 205 44 44 chr17 22345746 22345951 -67158602 + Tigger2 DNA MER2_type 2511 2715 -3 2139 239 106 117 chr17 22345952 22347507 -67157046 + L1MC4a LINE L1 6515 7995 0 758 126 42 48 chr17 22347598 22347765 -67156788 + L1MC4 LINE L1 7242 7407 -635 9923 226 16 18 chr17 22347778 22350503 -67154050 + L1PA11 LINE L1 1122 4652 -2932 12365 180 15 20 chr17 22350508 22353043 -67151510 - L1PB1 LINE L1 -2 6865 4373 2109 150 22 30 chr17 22353043 22353410 -67151143 - THE1B LTR MaLR 0 364 1 12365 180 15 20 chr17 22353410 22354976 -67149577 - L1PB1 LINE L1 -2494 4373 2801 7764 145 17 15 chr17 22354977 22357095 -67147458 + L1PA11 LINE L1 5484 7611 -1 1352 237 118 11 chr17 22357110 22357544 -67147009 + L1MC4 LINE L1 7413 7892 -150 1575 194 7 3 chr17 22358307 22358639 -67145914 - AluJb SINE Alu 0 333 1 260 289 159 72 chr17 22358839 22359338 -67145215 - L2 LINE L2 0 3272 2745 339 266 53 26 chr17 22361157 22361270 -67143283 - MIR3 SINE MIR -48 160 45 2340 76 0 0 chr17 22361350 22361665 -67142888 + AluY SINE Alu 1 311 0 2283 114 0 0 chr17 22361678 22361986 -67142567 + AluSg SINE Alu 3 310 0 2201 104 0 0 chr17 22362975 22363264 -67141289 - AluSx SINE Alu -18 294 6 25 0 0 0 chr17 22363506 22363531 -67141022 + AT_rich Low_complexity Low_complexity 1 25 0 2043 118 11 0 chr17 22363541 22363821 -67140732 - AluSx SINE Alu -29 283 1 602 124 21 10 chr17 22363893 22363990 -67140563 + MER4A LTR ERV1 1 98 -566 1815 131 3 79 chr17 22363990 22364364 -67140189 + MER4A LTR ERV1 261 664 0 888 196 0 46 chr17 22364859 22365032 -67139521 - FAM SINE Alu -9 166 2 536 184 9 0 chr17 22366676 22366785 -67137768 + L1MA9 LINE L1 6164 6273 -39 2183 67 19 48 chr17 22368937 22369249 -67135304 - AluY SINE Alu -8 303 1 1136 280 144 22 chr17 22370001 22370494 -67134059 + MLT1G1 LTR MaLR 2 595 0 345 250 0 25 chr17 22370871 22370951 -67133602 + Tigger5 DNA MER2_type 2 79 -2244 253 268 0 14 chr17 22370969 22371040 -67133513 - Tigger5 DNA MER2_type -5 2318 2249 837 255 31 2 chr17 22372187 22372410 -67132143 + L1MA5 LINE L1 8 288 -6921 6551 235 79 29 chr17 22372502 22374438 -67130115 + L1MA5 LINE L1 841 2679 -4529 1888 168 0 10 chr17 22374438 22374748 -67129805 + AluSx SINE Alu 1 307 -5 6551 235 79 29 chr17 22374748 22376538 -67128015 + L1MA5 LINE L1 2679 4809 -2399 1641 177 28 64 chr17 22376531 22377001 -67127552 + L1MA5 LINE L1 5220 5672 -1536 * 9773 255 45 64 chr17 22377022 22377897 -67126656 + L1PA16 LINE L1 1 892 -5905 2239 124 0 12 chr17 22377897 22378235 -67126318 - MER1B DNA MER1_type 0 337 4 9773 255 45 64 chr17 22378235 22381284 -67123269 + L1PA16 LINE L1 892 3999 -2798 258 32 0 0 chr17 22381284 22381315 -67123238 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 9773 255 45 64 chr17 22381315 22382105 -67122448 + L1PA16 LINE L1 3999 4803 -1994 734 181 0 40 chr17 22382105 22382254 -67122299 + FLAM_C SINE Alu 1 143 0 9773 255 45 64 chr17 22382254 22383380 -67121173 + L1PA16 LINE L1 4803 5799 -998 392 241 12 56 chr17 22383875 22384037 -67120516 + GA-rich Low_complexity Low_complexity 2 156 0 4908 151 23 30 chr17 22385527 22386583 -67117970 + L1PA16 LINE L1 5769 6816 -1 3824 170 31 46 chr17 22386625 22388159 -67116394 + L1MA5 LINE L1 5662 7170 -192 1157 118 0 6 chr17 22388159 22388320 -67116233 - AluSg/x SINE Alu -17 295 136 948 138 17 6 chr17 22388330 22388511 -67116042 + L1MA5 LINE L1 7180 7362 0 598 246 0 0 chr17 22388515 22388641 -67115912 + FLAM_A SINE Alu 1 126 -16 932 256 101 25 chr17 22388684 22389111 -67115442 + MLT1G1 LTR MaLR 45 593 -2 1151 207 41 7 chr17 22390476 22390766 -67113787 + L1MB8 LINE L1 4771 5070 -1076 331 179 48 0 chr17 22390770 22390854 -67113699 + L1MB8 LINE L1 5114 5201 -945 851 142 8 0 chr17 22390856 22390976 -67113577 + FLAM_C SINE Alu 1 121 -22 28 29 0 0 chr17 22390976 22391011 -67113542 + AT_rich Low_complexity Low_complexity 1 35 0 3743 163 24 17 chr17 22391018 22391940 -67112613 + L1MB8 LINE L1 5188 6177 -1 27 62 0 0 chr17 22392444 22392492 -67112061 + AT_rich Low_complexity Low_complexity 1 48 0 398 327 59 0 chr17 22393122 22393275 -67111278 + L2 LINE L2 2722 2883 -431 1086 73 0 0 chr17 22393537 22393673 -67110880 + AluSq/x SINE Alu 1 136 -177 225 0 0 0 chr17 22393692 22393717 -67110836 + (A)n Simple_repeat Simple_repeat 1 25 0 1838 154 3 13 chr17 22395793 22396092 -67108461 - AluJb SINE Alu -16 296 1 2020 81 0 11 chr17 22396418 22396689 -67107864 - AluY SINE Alu -4 307 40 351 0 0 0 chr17 22397152 22397191 -67107362 + (TG)n Simple_repeat Simple_repeat 2 40 0 3649 191 68 6 chr17 22398940 22399190 -67105363 + L1PB3 LINE L1 4109 4342 -1804 207 114 0 0 chr17 22399190 22399225 -67105328 + (CAA)n Simple_repeat Simple_repeat 3 37 0 3649 191 68 6 chr17 22399225 22399816 -67104737 + L1PB3 LINE L1 4342 5002 -1144 784 165 0 0 chr17 22399826 22399947 -67104606 + FLAM_C SINE Alu 12 132 -11 643 103 0 10 chr17 22399967 22400064 -67104489 + L1PB3 LINE L1 6025 6120 -34 234 0 0 0 chr17 22400064 22400090 -67104463 + (TA)n Simple_repeat Simple_repeat 2 27 0 492 62 0 0 chr17 22400090 22400155 -67104398 - Alu SINE Alu -8 303 239 1796 123 11 0 chr17 22400157 22400426 -67104127 + AluSp SINE Alu 42 313 0 5672 110 27 10 chr17 22400429 22401396 -67103157 + L1PB3 LINE L1 5157 6154 0 1065 226 63 19 chr17 22401644 22401914 -67102639 + AluJo SINE Alu 1 282 -30 433 307 184 27 chr17 22402543 22402875 -67101678 - L2 LINE L2 -1 3312 2929 1690 297 69 14 chr17 22402881 22403545 -67101008 + L1MC/D LINE L1 40 740 -5656 285 228 28 72 chr17 22403589 22403769 -67100784 + L1MC/D LINE L1 1028 1199 -5197 1526 253 42 48 chr17 22403828 22403880 -67100673 + L1MC/D LINE L1 1944 1995 -4401 1809 114 19 4 chr17 22403880 22404142 -67100411 - L1PB1 LINE L1 -7 6144 5879 1526 253 42 48 chr17 22404142 22404667 -67099886 + L1MC/D LINE L1 1995 2517 -3879 1161 61 0 0 chr17 22404688 22404820 -67099733 + AluY SINE Alu 1 132 -179 3864 234 94 69 chr17 22404826 22405089 -67099464 + L1MC/D LINE L1 2478 2733 -3482 2207 48 100 0 chr17 22405089 22405360 -67099193 - AluY SINE Alu -13 298 1 3864 234 94 69 chr17 22405360 22405774 -67098779 + L1MC/D LINE L1 2733 3135 -3080 2036 168 48 11 chr17 22405774 22406126 -67098427 + MLT1A1 LTR MaLR 1 365 0 3864 234 94 69 chr17 22406126 22406732 -67097821 + L1MC/D LINE L1 3135 3822 -2393 2949 160 14 14 chr17 22406732 22407244 -67097309 + L1MC1 LINE L1 5821 6332 -1 3864 234 94 69 chr17 22407244 22407728 -67096825 + L1MC/D LINE L1 3822 4292 -1923 691 271 68 0 chr17 22407728 22407905 -67096648 + MER58A DNA MER1_type 2 190 -34 951 224 4 35 chr17 22408018 22408272 -67096281 + L1MC/D LINE L1 5422 5667 -2187 426 247 149 13 chr17 22408260 22408414 -67096139 + L1MA10 LINE L1 6151 6325 -9 * 223 303 36 85 chr17 22408536 22408701 -67095852 - L2 LINE L2 -572 2742 2586 725 255 32 37 chr17 22409869 22410085 -67094468 - MIR SINE MIR -25 237 23 183 162 0 0 chr17 22410299 22410336 -67094217 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr17 22410443 22410464 -67094089 + AT_rich Low_complexity Low_complexity 1 21 0 2290 123 0 0 chr17 22410471 22410781 -67093772 + AluSg SINE Alu 1 310 0 441 283 179 31 chr17 22411241 22411464 -67093089 + L2 LINE L2 1652 1907 -1407 2242 96 17 0 chr17 22412224 22412525 -67092028 + AluSc SINE Alu 1 306 -3 2465 41 41 0 chr17 22412530 22412824 -67091729 + AluY SINE Alu 1 306 -5 186 43 0 0 chr17 22413391 22413414 -67091139 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2945 285 102 32 chr17 22414378 22415794 -67088759 - L2 LINE L2 -6 3307 1778 361 315 11 0 chr17 22416366 22416455 -67088098 + MER58A DNA MER1_type 1 90 -17 321 261 0 0 chr17 22416461 22416526 -67088027 + MER58A DNA MER1_type 160 224 0 227 325 48 0 chr17 22416928 22417011 -67087542 - L1MC/D LINE L1 -2043 5765 5679 555 281 108 47 chr17 22417070 22417411 -67087142 - L1MC/D LINE L1 -2062 5746 5385 2212 129 7 0 chr17 22417501 22417811 -67086742 - AluSp SINE Alu -1 312 1 27 0 0 0 chr17 22418150 22418177 -67086376 + AT_rich Low_complexity Low_complexity 1 27 0 189 74 0 0 chr17 22418497 22418524 -67086029 + (T)n Simple_repeat Simple_repeat 1 27 0 2170 137 0 12 chr17 22419273 22419595 -67084958 - 7SLRNA srpRNA srpRNA 0 320 3 21 36 0 0 chr17 22421960 22421988 -67082565 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr17 22422680 22422715 -67081838 + AT_rich Low_complexity Low_complexity 1 35 0 223 200 22 0 chr17 22422935 22422980 -67081573 - L2 LINE L2 -5 3308 3263 2097 113 0 10 chr17 22423552 22423844 -67080709 - AluSg SINE Alu -4 306 18 23 54 0 0 chr17 22424907 22424944 -67079609 + AT_rich Low_complexity Low_complexity 1 37 0 2487 43 3 16 chr17 22425185 22425488 -67079065 - AluY SINE Alu -12 299 1 394 227 0 0 chr17 22425495 22425592 -67078961 + Charlie1 DNA MER1_type 2620 2716 -45 22 0 0 0 chr17 22425593 22425615 -67078938 + AT_rich Low_complexity Low_complexity 1 22 0 645 140 0 0 chr17 22426329 22426422 -67078131 + Tigger7 DNA MER2_type 2395 2487 0 2273 167 19 19 chr17 22427400 22427814 -67076739 + L1MC1 LINE L1 5906 6319 -14 2959 172 17 50 chr17 22428399 22428980 -67075573 + MER68 LTR ERV1 1 562 0 559 269 9 0 chr17 22429341 22429449 -67075104 + FAM SINE Alu 1 109 -76 2374 68 0 13 chr17 22429465 22429776 -67074777 + AluY SINE Alu 1 307 -4 334 327 123 49 chr17 22430783 22431330 -67073223 + L2 LINE L2 1941 2527 -787 710 259 155 0 chr17 22431698 22431891 -67072662 + MER58A DNA MER1_type 2 224 0 701 305 125 9 chr17 22431964 22432292 -67072261 + MLT1L LTR MaLR 5 370 -245 238 276 0 26 chr17 22432352 22432428 -67072125 + MLT1L LTR MaLR 537 610 -5 2182 115 3 19 chr17 22432474 22432788 -67071765 - AluSc SINE Alu 0 309 1 2088 118 3 0 chr17 22432824 22433113 -67071440 + AluSx SINE Alu 1 290 -22 1825 154 3 39 chr17 22433519 22433831 -67070722 - AluJo SINE Alu -11 301 1 1658 162 37 14 chr17 22434548 22434844 -67069709 - AluJo SINE Alu -9 303 1 2412 170 21 28 chr17 22434949 22435385 -67069168 + Tigger2a DNA MER2_type 2 434 0 21 0 0 0 chr17 22435415 22435436 -67069117 + AT_rich Low_complexity Low_complexity 1 21 0 2413 61 7 3 chr17 22435525 22435820 -67068733 + AluY SINE Alu 1 296 -15 216 319 83 38 chr17 22436411 22436568 -67067985 + MIR SINE MIR 58 221 -41 604 136 0 64 chr17 22437230 22437340 -67067213 - U6 snRNA snRNA -1 106 4 2265 82 0 10 chr17 22437340 22437644 -67066909 - AluY SINE Alu -10 301 1 897 64 0 0 chr17 22437946 22438056 -67066497 - AluSg SINE Alu -200 110 1 2419 31 42 0 chr17 22438134 22438422 -67066131 - AluY SINE Alu -11 300 1 2383 88 0 0 chr17 22439931 22440227 -67064326 + AluSx SINE Alu 1 296 -16 335 115 33 0 chr17 22440230 22440291 -67064262 + GA-rich Low_complexity Low_complexity 4 66 0 1477 141 16 21 chr17 22440373 22440615 -67063938 - LOR1b LTR ERV1 0 461 221 2377 93 0 10 chr17 22440630 22440942 -67063611 + AluSc SINE Alu 1 309 0 21 71 0 0 chr17 22441306 22441348 -67063205 + AT_rich Low_complexity Low_complexity 1 42 0 1736 170 0 41 chr17 22442592 22442781 -67061772 - AluJo SINE Alu -8 304 132 2008 127 23 10 chr17 22442781 22443080 -67061473 + AluSx SINE Alu 1 303 -9 1736 170 0 41 chr17 22443080 22443207 -67061346 - AluJo SINE Alu -180 132 1 573 75 0 53 chr17 22443565 22443659 -67060894 + Alu SINE Alu 221 309 0 2075 129 0 10 chr17 22443670 22443981 -67060572 + AluSq SINE Alu 1 308 -5 234 296 81 52 chr17 22444351 22444523 -67060030 - MER5B DNA MER1_type 0 178 2 992 167 0 0 chr17 22445693 22445849 -67058704 - FRAM SINE Alu -23 153 1 3159 211 90 39 chr17 22448066 22448669 -67055884 + L1M4 LINE L1 3482 4148 -1998 2080 113 0 10 chr17 22448669 22448962 -67055591 + AluSx SINE Alu 23 312 0 3159 211 90 39 chr17 22448962 22449273 -67055280 + L1M4 LINE L1 4148 4442 -1704 251 329 25 0 chr17 22449295 22449374 -67055179 + MIR SINE MIR 14 94 -168 4740 113 20 47 chr17 22449897 22450218 -67054335 + L1PA16 LINE L1 5444 5772 -394 2299 106 3 13 chr17 22450218 22450529 -67054024 + AluSq SINE Alu 1 308 -5 4740 113 20 47 chr17 22450529 22450950 -67053603 + L1PA16 LINE L1 5772 6166 0 2401 92 0 3 chr17 22451928 22452234 -67052319 - AluSq SINE Alu -8 305 1 337 178 0 68 chr17 22452182 22452255 -67052298 - AluSg/x SINE Alu -115 187 120 * 377 269 44 0 chr17 22452235 22452396 -67052157 - L1ME LINE L1 -711 5434 5270 457 215 62 84 chr17 22452403 22452668 -67051885 - L1MEd LINE L1 -4903 1216 1076 507 255 123 81 chr17 22452778 22453148 -67051405 + MLT1L LTR MaLR 121 609 -6 22 0 0 0 chr17 22453158 22453180 -67051373 + AT_rich Low_complexity Low_complexity 1 22 0 363 268 102 44 chr17 22453180 22453511 -67051042 - L1MEd LINE L1 -5044 1075 700 405 259 53 47 chr17 22453876 22454046 -67050507 - L1MEd LINE L1 -5943 176 6 340 258 133 13 chr17 22454650 22454875 -67049678 - HAL1 LINE L1 -8 2499 2248 505 311 60 0 chr17 22455669 22455836 -67048717 - HAL1 LINE L1 -814 1693 1517 23 54 0 0 chr17 22455952 22455989 -67048564 + AT_rich Low_complexity Low_complexity 1 37 0 1722 170 0 58 chr17 22456038 22456350 -67048203 - AluSx SINE Alu -18 294 1 2055 134 0 0 chr17 22456377 22456669 -67047884 - AluSx SINE Alu -20 292 1 284 256 12 24 chr17 22457184 22457266 -67047287 - L1ME LINE L1 -517 5604 5524 561 179 89 8 chr17 22457442 22457565 -67046988 - FLAM_A SINE Alu 0 133 1 401 159 0 14 chr17 22457637 22457706 -67046847 + AluSp SINE Alu 136 203 -100 2032 139 0 3 chr17 22458333 22458620 -67045933 + AluSx SINE Alu 1 286 -26 22 0 0 0 chr17 22458909 22458931 -67045622 + AT_rich Low_complexity Low_complexity 1 22 0 397 253 54 81 chr17 22460064 22460242 -67044311 + L2 LINE L2 2051 2217 -1097 751 197 104 6 chr17 22460242 22460425 -67044128 - MER3 DNA MER1_type -4 205 5 397 253 54 81 chr17 22460425 22460578 -67043975 + L2 LINE L2 2217 2373 -941 2010 186 32 22 chr17 22460660 22460755 -67043798 + MLT2D LTR ERVL 1 94 -320 1816 157 26 32 chr17 22460755 22461068 -67043485 - AluJo SINE Alu -1 311 1 2010 186 32 22 chr17 22461068 22461343 -67043210 + MLT2D LTR ERVL 94 365 -49 180 0 0 0 chr17 22461343 22461363 -67043190 + (TC)n Simple_repeat Simple_repeat 2 21 0 231 36 0 0 chr17 22461363 22461391 -67043162 + (CA)n Simple_repeat Simple_repeat 2 29 0 252 0 0 0 chr17 22461390 22461418 -67043135 + (TC)n Simple_repeat Simple_repeat 2 29 0 2010 186 32 22 chr17 22461391 22461448 -67043105 + MLT2D LTR ERVL 364 407 -7 389 296 112 0 chr17 22461561 22461730 -67042823 + L2 LINE L2 2394 2581 -733 2096 99 75 0 chr17 22461988 22462270 -67042283 - AluSx SINE Alu -9 303 1 841 214 92 5 chr17 22462588 22462794 -67041759 + MER58A DNA MER1_type 1 224 0 400 258 61 8 chr17 22462852 22462984 -67041569 + MER103 DNA DNA 28 166 0 8680 53 1 0 chr17 22463467 22465325 -67039228 + L1PA5 LINE L1 4299 6160 0 273 256 0 56 chr17 22465516 22465606 -67038947 - MER103 DNA DNA -78 88 4 377 250 0 18 chr17 22465609 22465777 -67038776 + (CACCAT)n Simple_repeat Simple_repeat 5 169 0 2108 128 30 0 chr17 22466058 22466355 -67038198 + AluSq SINE Alu 1 306 -7 1662 129 8 23 chr17 22467752 22468015 -67036538 + AluSx SINE Alu 43 301 -11 1878 151 10 7 chr17 22468496 22468787 -67035766 + AluSx SINE Alu 1 292 -20 215 304 252 0 chr17 22468810 22468925 -67035628 - MIR SINE MIR -12 250 107 1776 149 0 24 chr17 22469552 22469841 -67034712 + AluSx SINE Alu 30 311 -1 764 214 65 0 chr17 22469841 22469995 -67034558 + AluJo/FRAM SINE Alu 134 297 -15 351 259 0 0 chr17 22469998 22470083 -67034470 - U6 snRNA snRNA -22 85 1 1890 94 0 109 chr17 22470669 22470734 -67033819 - L1P4 LINE L1 -586 5579 5509 1983 123 0 14 chr17 22470734 22471019 -67033534 + AluSx SINE Alu 1 281 -31 2673 71 3 38 chr17 22471019 22471257 -67033296 + THE1A LTR MaLR 2 224 -131 2406 83 0 19 chr17 22471257 22471571 -67032982 + AluSg SINE Alu 1 308 -2 2673 71 3 38 chr17 22471571 22471699 -67032854 + THE1A LTR MaLR 224 355 0 1890 94 0 109 chr17 22471699 22471982 -67032571 - L1P4 LINE L1 -654 5511 5268 3779 88 46 12 chr17 22471982 22472549 -67032004 + L1PA11 LINE L1 5588 6173 -1 2915 16 0 0 chr17 22472885 22473203 -67031350 - AluYb8 SINE Alu 0 318 1 1728 181 30 3 chr17 22474232 22474535 -67030018 + AluJo SINE Alu 1 311 -1 250 138 35 17 chr17 22474538 22474596 -67029957 + GA-rich Low_complexity Low_complexity 4 62 0 312 357 54 9 chr17 22475975 22476199 -67028354 - L1MEc LINE L1 -6014 382 149 1754 191 0 7 chr17 22476450 22476749 -67027804 + AluJb SINE Alu 1 297 -15 368 224 140 14 chr17 22476759 22476902 -67027651 + L1MB3 LINE L1 5317 5477 -2331 1899 147 0 29 chr17 22477133 22477446 -67027107 - AluJo SINE Alu -8 304 1 387 261 7 29 chr17 22477740 22477878 -67026675 - L1M4 LINE L1 -1447 4699 4565 603 207 44 58 chr17 22479052 22479240 -67025313 - MER6 DNA MER2_type -1 864 -52 319 220 22 44 chr17 22479345 22479436 -67025117 + MIR3 SINE MIR 72 160 -48 987 186 72 0 chr17 22479572 22479766 -67024787 - MER3 DNA MER1_type -1 208 1 490 291 50 6 chr17 22479878 22480060 -67024493 + MIR SINE MIR 1 190 -72 295 243 0 0 chr17 22480183 22480261 -67024292 - L1ME LINE L1 -374 5747 5670 225 222 19 0 chr17 22480272 22480326 -67024227 - L1ME LINE L1 -526 5595 5541 292 294 12 0 chr17 22480361 22480446 -67024107 - L1MB3 LINE L1 -268 5915 5830 2534 80 3 0 chr17 22480717 22481029 -67023524 + AluSp SINE Alu 1 313 0 21 0 0 0 chr17 22481500 22481521 -67023032 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr17 22481618 22481639 -67022914 + (GA)n Simple_repeat Simple_repeat 2 22 0 814 228 0 0 chr17 22481639 22481784 -67022769 - FRAM SINE Alu -34 142 1 1482 203 37 23 chr17 22482436 22482785 -67021768 + L1MB3 LINE L1 5830 6183 0 1592 182 3 38 chr17 22483917 22484235 -67020318 + AluJo SINE Alu 1 307 -5 343 356 12 36 chr17 22485110 22485357 -67019196 + L1M4 LINE L1 3777 4017 -2129 42 0 0 0 chr17 22485382 22485424 -67019129 + AT_rich Low_complexity Low_complexity 1 42 0 1831 130 92 3 chr17 22485559 22485843 -67018710 + AluSc SINE Alu 1 309 0 1268 253 24 24 chr17 22486363 22486742 -67017811 + HAL1 LINE L1 15 393 -2114 2257 233 139 59 chr17 22486766 22486858 -67017695 + HAL1 LINE L1 504 587 -1920 1864 125 68 0 chr17 22486858 22487137 -67017416 - AluSx SINE Alu -14 298 1 2257 233 139 59 chr17 22487137 22487569 -67016984 + HAL1 LINE L1 587 983 -1524 2365 151 8 8 chr17 22487569 22487967 -67016586 + L1MB2 LINE L1 5773 6170 -1 2257 233 139 59 chr17 22487967 22488635 -67015918 + HAL1 LINE L1 983 1793 -714 1009 259 144 35 chr17 22488649 22489254 -67015299 + HAL1 LINE L1 1837 2507 0 296 256 106 39 chr17 22489449 22489629 -67014924 + L1ME LINE L1 5469 5660 -461 1477 176 3 88 chr17 22489702 22490021 -67014532 - AluJo SINE Alu -17 295 4 1797 186 8 32 chr17 22490046 22490422 -67014131 - L1MB5 LINE L1 -6 6168 5802 1143 184 29 21 chr17 22490426 22490665 -67013888 - MER68 LTR ERV1 -25 537 297 1163 92 13 2 chr17 22490666 22490905 -67013648 + AluSp SINE Alu 2 292 -21 1357 170 112 4 chr17 22490905 22491182 -67013371 - MER68 LTR ERV1 -255 307 1 1304 119 0 6 chr17 22492365 22492541 -67012012 + AluJb SINE Alu 1 175 -137 610 204 0 0 chr17 22492635 22492794 -67011759 + AluY SINE Alu 170 328 0 2226 120 3 3 chr17 22492916 22493224 -67011329 - AluSx SINE Alu -3 309 2 325 145 0 48 chr17 22493372 22493434 -67011119 + L1M4 LINE L1 5204 5262 -884 1109 155 0 12 chr17 22493474 22493642 -67010911 - FRAM SINE Alu -10 166 1 2421 77 0 16 chr17 22494216 22494528 -67010025 + AluSq SINE Alu 1 307 -6 2267 90 20 0 chr17 22494532 22494833 -67009720 + AluSx SINE Alu 1 307 -5 2420 42 42 0 chr17 22494838 22495124 -67009429 + AluY SINE Alu 1 298 -13 243 0 0 0 chr17 22495692 22495719 -67008834 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 237 65 0 0 chr17 22496601 22496632 -67007921 + (T)n Simple_repeat Simple_repeat 1 31 0 476 296 147 47 chr17 22496688 22497149 -67007404 - L2 LINE L2 -6 3307 2799 2553 279 94 24 chr17 22497167 22498217 -67006336 - L2 LINE L2 -413 2901 1778 308 348 11 0 chr17 22498789 22498878 -67005675 + MER58A DNA MER1_type 1 90 -17 311 277 0 0 chr17 22498884 22498949 -67005604 + MER58A DNA MER1_type 160 224 0 459 281 122 50 chr17 22499464 22499841 -67004712 - L1MC/D LINE L1 -462 5659 5385 2240 119 10 0 chr17 22499931 22500241 -67004312 - AluSp SINE Alu 0 313 1 27 0 0 0 chr17 22500580 22500607 -67003946 + AT_rich Low_complexity Low_complexity 1 27 0 2235 123 0 19 chr17 22501696 22502020 -67002533 - 7SLRNA srpRNA srpRNA 0 320 3 21 36 0 0 chr17 22504385 22504413 -67000140 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr17 22505105 22505140 -66999413 + AT_rich Low_complexity Low_complexity 1 35 0 229 200 22 0 chr17 22505360 22505405 -66999148 - L2 LINE L2 -5 3308 3263 2147 116 0 10 chr17 22505978 22506270 -66998283 - AluSg SINE Alu -4 306 18 23 54 0 0 chr17 22507332 22507369 -66997184 + AT_rich Low_complexity Low_complexity 1 37 0 2593 54 0 0 chr17 22507609 22507907 -66996646 - AluY SINE Alu -13 298 1 567 224 129 0 chr17 22508033 22508203 -66996350 + Charlie1 DNA MER1_type 8 199 -2562 2477 62 3 0 chr17 22508248 22508556 -66995997 - AluY SINE Alu -2 309 1 375 216 0 0 chr17 22508563 22508660 -66995893 + Charlie1 DNA MER1_type 2620 2716 -45 22 0 0 0 chr17 22508661 22508683 -66995870 + AT_rich Low_complexity Low_complexity 1 22 0 546 153 0 0 chr17 22509404 22509489 -66995064 + Tigger7 DNA MER2_type 2403 2487 0 2163 164 19 19 chr17 22510472 22510886 -66993667 + L1MC1 LINE L1 5906 6319 -14 23 0 0 0 chr17 22511412 22511435 -66993118 + AT_rich Low_complexity Low_complexity 1 23 0 2708 178 17 50 chr17 22511471 22512051 -66992502 + MER68 LTR ERV1 1 561 -1 549 269 9 0 chr17 22512412 22512520 -66992033 + FAM SINE Alu 1 109 -76 2361 74 0 13 chr17 22512536 22512846 -66991707 + AluY SINE Alu 1 306 -5 363 313 130 57 chr17 22513851 22514397 -66990156 + L2 LINE L2 1942 2527 -787 185 232 74 116 chr17 22514585 22514680 -66989873 - MER5C DNA MER1_type -219 105 15 647 259 155 0 chr17 22514766 22514959 -66989594 + MER58A DNA MER1_type 2 224 0 404 306 128 19 chr17 22515032 22515297 -66989256 + MLT1L LTR MaLR 5 298 -317 287 246 0 0 chr17 22515404 22515469 -66989084 + MLT1L LTR MaLR 546 610 -5 1266 118 0 0 chr17 22515515 22515685 -66988868 - AluSg/x SINE Alu 0 312 143 1752 75 5 0 chr17 22518251 22518465 -66986088 + AluSp SINE Alu 85 299 -14 29 0 0 0 chr17 22518564 22518593 -66985960 + AT_rich Low_complexity Low_complexity 1 29 0 2981 209 64 9 chr17 22519542 22520643 -66983910 - Charlie1a DNA MER1_type -227 1228 5 638 268 33 70 chr17 22520695 22520908 -66983645 - MIR SINE MIR -5 257 53 314 266 11 11 chr17 22520943 22521037 -66983516 + L2 LINE L2 3220 3313 0 785 294 43 29 chr17 22521363 22521778 -66982775 - L1MC4a LINE L1 -1741 6067 5647 2459 82 0 7 chr17 22524160 22524463 -66980090 - AluY SINE Alu -9 302 2 2289 158 80 5 chr17 22524964 22525362 -66979191 - MSTA LTR MaLR 0 428 1 225 94 0 0 chr17 22525368 22525400 -66979153 + (A)n Simple_repeat Simple_repeat 1 32 0 625 273 6 36 chr17 22525459 22525624 -66978929 + MER58A DNA MER1_type 1 160 0 1608 163 55 23 chr17 22525637 22525944 -66978609 - MLT1A1 LTR MaLR -30 335 19 334 167 0 15 chr17 22525959 22526025 -66978528 + MER58A DNA MER1_type 160 224 0 1813 99 0 12 chr17 22526749 22526991 -66977562 + AluSq SINE Alu 1 239 -74 1906 118 7 30 chr17 22528218 22528335 -66976218 + AluSx SINE Alu 23 141 -171 2519 61 3 10 chr17 22528335 22528648 -66975905 + AluY SINE Alu 1 311 0 1906 118 7 30 chr17 22528648 22528826 -66975727 + AluSx SINE Alu 141 311 -1 235 333 16 0 chr17 22528979 22529042 -66975511 + MIR SINE MIR 14 77 -185 249 199 145 99 chr17 22529045 22529176 -66975377 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 22530246 22530274 -66974279 + AT_rich Low_complexity Low_complexity 1 28 0 256 206 145 99 chr17 22530573 22530704 -66973849 - MIR SINE MIR -82 180 44 208 250 23 0 chr17 22530707 22530751 -66973802 - MIR SINE MIR -185 77 33 355 261 126 8 chr17 22531323 22531442 -66973111 + MIR SINE MIR 7 139 -123 590 269 150 67 chr17 22531455 22531816 -66972737 - L2 LINE L2 -20 3252 2862 520 291 53 27 chr17 22532079 22532229 -66972324 + MIR3 SINE MIR 33 185 -42 202 306 0 0 chr17 22532631 22532716 -66971837 + (CCA)n Simple_repeat Simple_repeat 3 87 0 368 278 31 63 chr17 22533723 22533914 -66970639 + MIR SINE MIR 28 212 -50 4479 247 103 48 chr17 22535671 22535938 -66968615 + HAL1 LINE L1 102 353 -2154 2423 83 0 3 chr17 22535938 22536239 -66968314 + AluY SINE Alu 1 300 -11 4479 247 103 48 chr17 22536239 22536908 -66967645 + HAL1 LINE L1 353 984 -1523 1982 166 0 0 chr17 22536908 22537204 -66967349 - AluJb SINE Alu -16 296 1 4479 247 103 48 chr17 22537204 22538426 -66966127 + HAL1 LINE L1 984 2380 -127 3645 52 0 0 chr17 22538496 22538939 -66965614 + L1PA6 LINE L1 5711 6153 -1 2330 88 10 10 chr17 22538944 22539249 -66965304 + AluY SINE Alu 1 305 -6 27 0 0 0 chr17 22539275 22539302 -66965251 + AT_rich Low_complexity Low_complexity 1 27 0 461 298 13 20 chr17 22539891 22540063 -66964490 + MIR SINE MIR 3 174 -88 180 415 11 11 chr17 22541167 22541261 -66963292 + MIR SINE MIR 48 141 -67 329 276 118 7 chr17 22543750 22543902 -66960651 + MIR3 SINE MIR 33 201 -7 406 228 55 16 chr17 22543981 22544108 -66960445 + MIR SINE MIR 20 151 -111 203 323 90 13 chr17 22544627 22544776 -66959777 - MIR SINE MIR -72 136 11 313 183 46 137 chr17 22544808 22544939 -66959614 - MIR SINE MIR -64 144 26 5953 128 26 25 chr17 22545348 22546285 -66958268 - LTR5 LTR ERVK 0 969 32 448 258 65 0 chr17 22547698 22547822 -66956731 + MIR SINE MIR 88 219 -43 306 274 108 38 chr17 22547847 22548033 -66956520 - L2 LINE L2 -12 3301 3103 180 326 22 56 chr17 22549470 22549559 -66954994 + MIR SINE MIR 61 146 -62 232 250 48 77 chr17 22550843 22550947 -66953606 - MIR SINE MIR -60 148 48 296 306 43 31 chr17 22559208 22559466 -66945087 + L2 LINE L2 2498 2758 -556 283 312 110 0 chr17 22560680 22560789 -66943764 + MIR3 SINE MIR 81 201 -7 216 0 0 0 chr17 22561120 22561144 -66943409 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 355 309 88 0 chr17 22561759 22561895 -66942658 + MIR SINE MIR 81 228 -34 2141 158 35 2 chr17 22562857 22563257 -66941296 + L1PB4 LINE L1 5539 5951 -205 1418 39 0 134 chr17 22563257 22563489 -66941064 - LTR14A LTR ERVK -143 201 1 198 253 27 40 chr17 22563557 22563632 -66940921 - MIR SINE MIR -133 129 56 534 288 76 0 chr17 22563682 22563866 -66940687 - L2 LINE L2 0 3313 3116 306 188 38 38 chr17 22563893 22563973 -66940580 - MER3 DNA MER1_type -5 204 125 2332 78 3 3 chr17 22563974 22564282 -66940271 + AluY SINE Alu 1 308 -3 216 333 16 0 chr17 22564374 22564437 -66940116 + MIR SINE MIR 14 77 -185 223 223 146 92 chr17 22564440 22564570 -66939983 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 22564869 22564897 -66939656 + AT_rich Low_complexity Low_complexity 1 28 0 190 214 145 99 chr17 22565967 22566098 -66938455 - MIR SINE MIR -82 180 44 216 333 16 0 chr17 22566101 22566164 -66938389 - MIR SINE MIR -185 77 14 2027 138 3 0 chr17 22566327 22566638 -66937915 - AluSx SINE Alu 0 312 1 1676 230 29 27 chr17 22566638 22566702 -66937851 - MLT1C-int LTR MaLR -749 622 560 1483 174 37 27 chr17 22566702 22566996 -66937557 - AluSx SINE Alu -15 297 1 1676 230 29 27 chr17 22566996 22567366 -66937187 - MLT1C-int LTR MaLR -811 560 184 1979 144 10 0 chr17 22567621 22567926 -66936627 + AluSq SINE Alu 1 308 -5 232 359 33 0 chr17 22568058 22568150 -66936403 + L2 LINE L2 3192 3286 -27 1218 239 87 34 chr17 22568793 22569229 -66935324 - MLT1C LTR MaLR 0 467 9 2183 59 10 7 chr17 22569655 22569944 -66934609 + AluY SINE Alu 17 306 -5 2154 92 3 0 chr17 22570416 22570711 -66933842 - AluSg SINE Alu -14 296 1 269 342 0 51 chr17 22570730 22570888 -66933665 + C-rich Low_complexity Low_complexity 2 151 0 208 274 0 0 chr17 22570944 22570995 -66933558 + (CGG)n Simple_repeat Simple_repeat 2 52 0 222 292 22 11 chr17 22571425 22571514 -66933039 + G-rich Low_complexity Low_complexity 1 90 0 248 322 11 35 chr17 22571600 22571774 -66932779 + G-rich Low_complexity Low_complexity 2 171 0 261 349 17 11 chr17 22571890 22572065 -66932488 + GA-rich Low_complexity Low_complexity 4 179 0 367 287 0 48 chr17 22572067 22572305 -66932248 + G-rich Low_complexity Low_complexity 1 226 0 342 339 6 18 chr17 22572250 22572421 -66932132 + GA-rich Low_complexity Low_complexity 1 169 0 * 879 184 6 0 chr17 22573402 22573560 -66930993 + AluJb SINE Alu 1 159 -153 2190 83 41 0 chr17 22575215 22575505 -66929048 - AluYa5 SINE Alu -9 302 1 402 68 17 0 chr17 22576568 22576627 -66927926 + HY3 scRNA scRNA 18 77 -24 1993 124 23 0 chr17 22577084 22577383 -66927170 + AluSx SINE Alu 3 308 -4 24 0 0 0 chr17 22577403 22577427 -66927126 + AT_rich Low_complexity Low_complexity 1 24 0 382 332 45 68 chr17 22577875 22578112 -66926441 + HAL1 LINE L1 904 1136 -1371 1872 85 4 0 chr17 22578112 22578360 -66926193 + AluY SINE Alu 1 249 -62 382 332 45 68 chr17 22578360 22578387 -66926166 + HAL1 LINE L1 1136 1162 -1345 208 387 77 5 chr17 22578396 22578590 -66925963 + L2 LINE L2 2542 2749 -565 4028 137 71 18 chr17 22578612 22579356 -66925197 - L1PA10 LINE L1 0 6168 5385 577 255 13 110 chr17 22579617 22579849 -66924704 + LTR41 LTR ERVL 469 722 -73 1012 75 90 232 chr17 22579849 22579935 -66924618 - MER30 DNA MER1_type -1 229 132 1900 127 7 13 chr17 22579935 22580234 -66924319 + AluSx SINE Alu 1 297 -15 1991 115 27 10 chr17 22580236 22580531 -66924022 + AluSc SINE Alu 1 300 -9 1012 75 90 232 chr17 22580531 22580708 -66923845 - MER30 DNA MER1_type -99 131 1 577 255 13 110 chr17 22580708 22580810 -66923743 + LTR41 LTR ERVL 722 791 -4 259 326 186 33 chr17 22580812 22581271 -66923282 + L2 LINE L2 2787 3312 -1 576 285 43 24 chr17 22581325 22581578 -66922975 + MIR SINE MIR 2 259 -3 1376 293 39 21 chr17 22585557 22586223 -66918330 - L1MC3 LINE L1 -1629 6156 5479 203 349 28 46 chr17 22590948 22591057 -66913496 + MIR SINE MIR 82 188 -74 1421 179 111 29 chr17 22591451 22591792 -66912761 - THE1C LTR MaLR 0 375 7 183 80 0 0 chr17 22592340 22592365 -66912188 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 223 167 24 0 chr17 22592852 22592894 -66911659 + C-rich Low_complexity Low_complexity 4 46 0 228 318 0 11 chr17 22593193 22593281 -66911272 + GA-rich Low_complexity Low_complexity 2 88 0 711 292 36 24 chr17 22593334 22593584 -66910969 + MER89-int LTR ERV1 1407 1659 -5142 323 261 134 32 chr17 22595012 22595169 -66909384 + L1MEc LINE L1 1916 2088 -4308 435 63 0 0 chr17 22595172 22595235 -66909318 + (TA)n Simple_repeat Simple_repeat 2 64 0 1474 193 3 14 chr17 22595248 22595533 -66909020 - AluJb SINE Alu -30 282 1 1355 0 0 6 chr17 22595560 22595716 -66908837 + (TCTCCC)n Simple_repeat Simple_repeat 1 155 0 5667 66 62 8 chr17 22595738 22596849 -66907704 + SVA Other Other 2 1386 0 23 0 0 0 chr17 22596884 22596907 -66907646 + AT_rich Low_complexity Low_complexity 1 23 0 831 245 13 52 chr17 22596947 22597180 -66907373 + MER58A DNA MER1_type 1 224 0 496 255 98 0 chr17 22597182 22597335 -66907218 - L2 LINE L2 -653 2661 2494 2301 89 0 13 chr17 22597425 22597739 -66906814 + AluY SINE Alu 1 310 -1 1740 159 29 76 chr17 22598205 22598614 -66905939 + MLT1B LTR MaLR 1 390 0 361 209 7 27 chr17 22599535 22599683 -66904870 + CT-rich Low_complexity Low_complexity 1 145 0 180 156 16 47 chr17 22599729 22599793 -66904760 + CT-rich Low_complexity Low_complexity 5 66 0 2039 179 13 98 chr17 22599891 22600216 -66904337 + L1MB5 LINE L1 5380 5644 -530 1815 115 0 7 chr17 22600216 22600483 -66904070 + L1PB1 LINE L1 5883 6150 -1 2039 179 13 98 chr17 22600483 22600687 -66903866 + L1MB5 LINE L1 5644 5864 -310 1248 229 6 16 chr17 22600716 22601030 -66903523 + AluJo SINE Alu 1 311 -1 2055 129 0 0 chr17 22601037 22601332 -66903221 + AluSc SINE Alu 7 301 -8 2345 71 19 84 chr17 22601936 22602303 -66902250 - LTR14A LTR ERVK -1 343 1 187 189 68 81 chr17 22602371 22602445 -66902108 - MIR SINE MIR -78 130 58 511 288 76 0 chr17 22602496 22602680 -66901873 - L2 LINE L2 0 3313 3116 324 203 38 25 chr17 22602707 22602786 -66901767 - MER3 DNA MER1_type -5 204 125 1110 60 0 0 chr17 22602787 22602921 -66901632 + AluY SINE Alu 1 134 -177 2000 127 24 3 chr17 22602921 22603215 -66901338 + AluY SINE Alu 1 298 -13 1813 116 4 0 chr17 22604383 22604633 -66899920 + AluSx SINE Alu 53 303 -9 2215 119 6 0 chr17 22605010 22605321 -66899232 - AluSp SINE Alu 0 313 1 495 224 80 0 chr17 22605490 22605646 -66898907 - MER3 DNA MER1_type -55 154 1 300 283 214 26 chr17 22605739 22606085 -66898468 - L2 LINE L2 -351 2963 2553 261 178 314 8 chr17 22606680 22606798 -66897755 + L2 LINE L2 2895 3048 -265 378 323 15 8 chr17 22606841 22606971 -66897582 + L2 LINE L2 3136 3266 -6 262 278 14 0 chr17 22607073 22607145 -66897408 - MIR SINE MIR -74 134 62 203 94 0 0 chr17 22607964 22607996 -66896557 + L2 LINE L2 2923 2954 -360 202 364 68 17 chr17 22608164 22608340 -66896213 + MIR3 SINE MIR 7 191 -17 1309 266 69 47 chr17 22608885 22609508 -66895045 + L1MC4a LINE L1 5256 5892 -1916 346 291 113 0 chr17 22610081 22610222 -66894331 - MIR SINE MIR -101 161 5 331 285 254 29 chr17 22610572 22610986 -66893567 - MER69 DNA AcHobo -1019 207 31 227 270 95 0 chr17 22611699 22611762 -66892791 + L2 LINE L2 3148 3216 -56 315 250 143 0 chr17 22611874 22611958 -66892595 - MIR SINE MIR -117 145 50 316 228 39 47 chr17 22612559 22612580 -66891973 + L1MC4 LINE L1 7913 7933 -109 2040 163 0 7 chr17 22612580 22612887 -66891666 + AluSx SINE Alu 1 305 -7 316 228 39 47 chr17 22612887 22612992 -66891561 + L1MC4 LINE L1 7933 8038 -4 434 302 83 53 chr17 22613158 22613496 -66891057 - L1ME4a LINE L1 -224 5897 5550 1626 130 4 0 chr17 22613540 22613770 -66890783 + AluSq SINE Alu 68 298 -15 703 276 105 16 chr17 22613842 22614212 -66890341 - L1ME4a LINE L1 -262 5859 5457 23 0 0 0 chr17 22614295 22614318 -66890235 + AT_rich Low_complexity Low_complexity 1 23 0 1346 62 0 4 chr17 22614811 22615024 -66889529 - AluY SINE Alu -8 303 1 229 25 0 50 chr17 22615109 22615149 -66889404 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 462 222 68 12 chr17 22615214 22615376 -66889177 - L1ME4a LINE L1 -1 6120 5950 352 226 97 86 chr17 22615481 22615667 -66888886 - L1 LINE L1 -2984 3162 2975 3886 124 50 19 chr17 22616154 22616797 -66887756 + THE1C-int LTR MaLR 918 1580 0 2014 146 52 22 chr17 22616797 22617161 -66887392 + THE1C LTR MaLR 1 375 0 1564 209 0 22 chr17 22617487 22617803 -66886750 - AluJo SINE Alu -1 311 3 1812 130 47 0 chr17 22622187 22622463 -66882090 + AluY SINE Alu 13 301 -10 712 294 17 0 chr17 22623088 22623265 -66881288 - MIR SINE MIR -3 259 80 213 346 86 25 chr17 22623328 22623490 -66881063 + MER5B DNA MER1_type 7 178 0 185 355 58 16 chr17 22623642 22623763 -66880790 + L2 LINE L2 3143 3268 -4 609 208 0 21 chr17 22624118 22624375 -66880178 + AluJo SINE Alu 9 295 -17 1551 182 0 14 chr17 22624389 22624669 -66879884 + AluJb SINE Alu 16 291 -21 322 256 13 32 chr17 22624848 22625004 -66879549 + GA-rich Low_complexity Low_complexity 2 154 0 1849 130 3 42 chr17 22626731 22627039 -66877514 - AluY SINE Alu -5 306 11 218 206 145 99 chr17 22627843 22627974 -66876579 - MIR SINE MIR -82 180 44 235 333 16 0 chr17 22627977 22628040 -66876513 - MIR SINE MIR -185 77 14 1583 209 3 0 chr17 22628197 22628504 -66876049 - AluSx SINE Alu 0 312 5 680 251 10 36 chr17 22628572 22628767 -66875786 - AluSg/x SINE Alu -15 297 108 23 0 0 0 chr17 22628872 22628895 -66875658 + AT_rich Low_complexity Low_complexity 1 23 0 363 295 15 25 chr17 22628972 22629172 -66875381 - L1ME4a LINE L1 -194 5927 5730 225 0 0 0 chr17 22629225 22629250 -66875303 + (TG)n Simple_repeat Simple_repeat 2 26 0 715 239 6 19 chr17 22629253 22629412 -66875141 - AluJo SINE Alu -31 281 125 308 263 85 34 chr17 22629418 22629536 -66875017 - L1ME4a LINE L1 -439 5682 5559 1455 184 0 12 chr17 22629774 22630029 -66874524 + AluSx SINE Alu 1 252 -60 798 199 41 0 chr17 22630129 22630300 -66874253 - L1M4b LINE L1 -6675 184 7 296 127 16 16 chr17 22630303 22630366 -66874187 + MLT1E1 LTR MaLR 587 649 -5 2348 87 7 3 chr17 22630537 22630837 -66873716 - AluSp SINE Alu -12 301 1 224 248 238 9 chr17 22630993 22631098 -66873455 - MIR SINE MIR -17 245 117 2119 117 8 72 chr17 22631494 22631854 -66872699 - MER1B DNA MER1_type 0 337 1 681 284 91 35 chr17 22632181 22632667 -66871886 + L1ME4a LINE L1 5608 6120 -1 182 274 0 119 chr17 22632700 22632747 -66871806 + MIR3 SINE MIR 106 140 -68 1594 149 0 0 chr17 22632747 22632975 -66871578 + AluJb SINE Alu 85 312 0 182 274 0 119 chr17 22632975 22633011 -66871542 + MIR3 SINE MIR 140 179 -29 1702 163 48 17 chr17 22634860 22635155 -66869398 - AluJo SINE Alu -7 305 2 2240 141 0 3 chr17 22636113 22636426 -66868127 - AluSx SINE Alu 0 312 1 2235 105 0 54 chr17 22636622 22636937 -66867616 - AluY SINE Alu -13 298 1 380 232 0 0 chr17 22636957 22637052 -66867501 - L1ME2 LINE L1 -6 6158 6064 388 311 148 27 chr17 22637870 22638053 -66866500 + MIR SINE MIR 34 238 -24 2026 133 0 20 chr17 22638154 22638454 -66866099 - AluJb SINE Alu -18 294 1 475 226 73 0 chr17 22638454 22638591 -66865962 + Charlie1 DNA MER1_type 71 217 -2544 433 172 54 0 chr17 22638605 22638698 -66865855 + Charlie1 DNA MER1_type 2634 2731 -30 247 250 52 73 chr17 22638734 22638830 -66865723 + MIR SINE MIR 162 255 -7 1606 180 50 3 chr17 22639761 22640044 -66864509 + AluJo SINE Alu 3 298 -14 2278 101 0 29 chr17 22640578 22640885 -66863668 + AluSx SINE Alu 1 298 -14 2141 111 0 4 chr17 22640943 22641255 -66863298 + AluSc SINE Alu 1 311 0 21 71 0 0 chr17 22642796 22642838 -66861715 + AT_rich Low_complexity Low_complexity 1 42 0 1785 128 6 68 chr17 22643844 22644180 -66860373 + MER1B DNA MER1_type 1 315 -24 1019 224 9 0 chr17 22644238 22644452 -66860101 - MER20 DNA MER1_type 0 219 4 279 327 9 9 chr17 22644479 22644592 -66859961 - L2 LINE L2 -951 2363 2251 353 320 50 50 chr17 22644889 22645070 -66859483 - MIR SINE MIR -54 208 28 180 200 0 0 chr17 22645890 22645935 -66858618 + (TG)n Simple_repeat Simple_repeat 1 45 0 480 277 12 0 chr17 22645977 22646143 -66858410 + (TG)n Simple_repeat Simple_repeat 1 168 0 204 229 16 0 chr17 22646163 22646224 -66858329 + (TG)n Simple_repeat Simple_repeat 1 62 0 234 195 0 0 chr17 22646267 22646308 -66858245 + L2 LINE L2 3016 3056 -216 291 304 0 13 chr17 22646454 22646533 -66858020 + L2 LINE L2 3190 3267 -5 507 234 221 0 chr17 22646891 22647036 -66857517 - MER5A DNA MER1_type 0 189 13 2089 117 37 0 chr17 22647230 22647530 -66857023 + AluY SINE Alu 1 311 0 300 212 188 12 chr17 22647588 22647725 -66856828 + MIR SINE MIR 16 183 -62 190 266 0 62 chr17 22647785 22647849 -66856704 + MIR SINE MIR 93 149 -59 423 256 248 21 chr17 22647942 22648180 -66856373 + L2 LINE L2 3021 3312 -1 279 346 96 13 chr17 22648768 22648924 -66855629 + MIR SINE MIR 13 181 -81 190 206 0 0 chr17 22648924 22648958 -66855595 + MER5A DNA MER1_type 1 34 -155 1970 133 0 7 chr17 22649421 22649700 -66854853 - AluSx SINE Alu -35 277 1 363 239 86 34 chr17 22649938 22650055 -66854498 + L1ME4a LINE L1 5559 5681 -440 775 241 6 13 chr17 22650062 22650220 -66854333 + AluJo SINE Alu 125 281 -31 243 0 0 0 chr17 22650223 22650250 -66854303 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 600 224 102 102 chr17 22650301 22650693 -66853860 + L1ME4a LINE L1 5730 6121 0 813 206 92 90 chr17 22650961 22651383 -66853170 + MER113 DNA MER1_type? 48 470 -51 356 229 171 0 chr17 22651483 22651588 -66852965 + L2 LINE L2 3149 3271 -1 374 283 294 6 chr17 22652011 22652188 -66852365 - MIR SINE MIR -29 233 6 243 301 135 23 chr17 22652332 22652465 -66852088 - L2 LINE L2 -6 3266 3119 406 274 105 20 chr17 22653102 22653255 -66851298 + MIR3 SINE MIR 20 185 -23 441 265 38 0 chr17 22654289 22654421 -66850132 + MIR SINE MIR 56 192 -70 183 261 46 0 chr17 22655318 22655383 -66849170 + L2 LINE L2 3145 3212 -60 255 325 111 0 chr17 22656209 22656326 -66848227 - MIR SINE MIR -1 261 132 737 231 214 31 chr17 22656432 22656792 -66847761 - L2 LINE L2 0 3313 2888 551 258 7 26 chr17 22656850 22657005 -66847548 + MER103 DNA DNA 2 153 -13 348 281 21 0 chr17 22658675 22658771 -66845782 - MER5A DNA MER1_type -77 112 15 662 158 9 0 chr17 22659199 22659313 -66845240 - THE1-int LTR MaLR -527 1053 939 1066 147 13 0 chr17 22659366 22659523 -66845030 - AluSg/x SINE Alu -10 302 144 2115 123 3 0 chr17 22659545 22659856 -66844697 - AluSp SINE Alu 0 312 1 204 40 0 0 chr17 22660798 22660823 -66843730 + (TCCC)n Simple_repeat Simple_repeat 2 26 0 763 270 17 0 chr17 22661116 22661294 -66843259 - MIR SINE MIR -3 259 79 417 301 86 25 chr17 22661348 22661511 -66843042 - MER5B DNA MER1_type 0 178 6 319 347 40 18 chr17 22661568 22661790 -66842763 + L2 LINE L2 3083 3309 -4 250 267 128 0 chr17 22661814 22661900 -66842653 + MIR SINE MIR 44 140 -122 253 333 10 0 chr17 22664644 22664740 -66839813 - MIR SINE MIR -129 133 37 250 280 57 105 chr17 22665086 22665418 -66839135 - L2 LINE L2 -51 3221 2906 208 301 54 18 chr17 22665445 22665611 -66838942 - L2 LINE L2 -464 2850 2679 329 213 50 159 chr17 22666347 22666501 -66838052 - MER102b DNA MER1_type -2187 230 114 658 219 0 0 chr17 22666501 22666620 -66837933 - FLAM_A SINE Alu -13 120 2 329 213 50 159 chr17 22666620 22666723 -66837830 - MER102b DNA MER1_type -2303 114 1 582 266 17 17 chr17 22666734 22666907 -66837646 - MIR SINE MIR -70 192 20 1677 122 137 8 chr17 22667648 22667911 -66836642 - AluSg SINE Alu -13 297 1 1975 107 101 3 chr17 22667913 22668241 -66836312 - L1PA11 LINE L1 -10 6164 5805 593 282 33 33 chr17 22669207 22669452 -66835101 + Tigger8 DNA MER2_type 236 480 -186 1693 160 0 63 chr17 22669455 22669773 -66834780 + AluJo SINE Alu 1 298 -14 253 252 81 27 chr17 22671174 22671285 -66833268 - L2 LINE L2 -46 3226 3110 539 295 72 10 chr17 22671826 22672033 -66832520 + MIR SINE MIR 32 251 -11 630 251 53 48 chr17 22672230 22672437 -66832116 - MER102b DNA MER1_type -7 334 127 1984 165 0 3 chr17 22672511 22672802 -66831751 + AluJb SINE Alu 1 290 -22 509 198 69 45 chr17 22672819 22673021 -66831532 + L1MC5 LINE L1 7711 7917 -44 239 313 0 0 chr17 22673034 22673098 -66831455 - MER102b DNA MER1_type -267 74 11 219 354 24 0 chr17 22673256 22673338 -66831215 + MIR SINE MIR 47 130 -132 1493 191 0 41 chr17 22673796 22674124 -66830429 - AluJo SINE Alu 0 316 1 366 272 63 63 chr17 22674161 22674481 -66830072 + L1MC4a LINE L1 5687 5801 -320 1804 173 86 45 chr17 22674488 22674719 -66829834 + MLT1D LTR MaLR 19 276 -229 2109 141 0 10 chr17 22674719 22675032 -66829521 - AluJb SINE Alu 0 312 3 1804 173 86 45 chr17 22675032 22675221 -66829332 + MLT1D LTR MaLR 276 456 -49 346 241 75 23 chr17 22675350 22675483 -66829070 + MIR SINE MIR 46 185 -77 256 170 73 4 chr17 22675951 22676021 -66828532 + MLT1D LTR MaLR 356 456 -39 573 180 0 2 chr17 22676096 22676205 -66828348 - MIR SINE MIR -56 152 45 205 153 153 0 chr17 22677431 22677490 -66827063 + L2 LINE L2 2985 3052 -220 548 273 164 9 chr17 22677506 22677726 -66826827 - MIR SINE MIR 0 262 9 372 184 26 0 chr17 22678548 22678624 -66825929 - MIR SINE MIR -63 145 68 1192 288 149 15 chr17 22679408 22679489 -66825064 + L1ME3 LINE L1 5491 5560 -602 1989 164 0 16 chr17 22679489 22679806 -66824747 + AluJb SINE Alu 1 312 0 1192 288 149 15 chr17 22679806 22680267 -66824286 + L1ME3 LINE L1 5560 6121 -41 1684 178 7 10 chr17 22680267 22680585 -66823968 + AluJo SINE Alu 1 312 0 1192 288 149 15 chr17 22680585 22680631 -66823922 + L1ME3 LINE L1 6121 6159 -3 876 283 127 36 chr17 22681075 22681889 -66822664 + L1MD1 LINE L1 5446 5996 -246 2583 175 52 25 chr17 22681129 22681488 -66823065 + L1MB3 LINE L1 5534 5915 -268 2439 107 0 0 chr17 22681488 22681798 -66822755 + AluSx SINE Alu 1 310 -2 2583 175 52 25 chr17 22681798 22681999 -66822554 + L1MB3 LINE L1 5915 6109 -74 1169 258 102 17 chr17 22681999 22682352 -66822201 - MLT1G3 LTR MaLR -212 383 1 196 323 94 0 chr17 22682361 22682457 -66822096 - L2 LINE L2 -36 3236 3132 2282 97 3 3 chr17 22682496 22682796 -66821757 - AluSx SINE Alu -12 300 1 686 286 68 5 chr17 22682827 22683033 -66821520 - MIR SINE MIR -30 232 14 489 332 45 9 chr17 22683429 22683649 -66820904 + MIR SINE MIR 20 247 -15 398 305 108 15 chr17 22683670 22683873 -66820680 - L3 LINE CR1 -471 1106 885 218 330 70 26 chr17 22684497 22684612 -66819941 - MIR SINE MIR -44 218 99 993 144 52 0 chr17 22684645 22684839 -66819714 + L1MB3 LINE L1 5979 6182 -1 380 243 27 74 chr17 22685049 22685137 -66819416 + MER113 DNA MER1_type? 233 324 -197 928 205 0 6 chr17 22685137 22685308 -66819245 + FAM SINE Alu 2 171 -4 2143 112 39 0 chr17 22685311 22685596 -66818957 + AluSg SINE Alu 1 296 -14 380 243 27 74 chr17 22685596 22685651 -66818902 + MER113 DNA MER1_type? 326 373 -148 230 0 0 32 chr17 22685659 22685690 -66818863 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 769 130 0 0 chr17 22685694 22685809 -66818744 - FLAM_C SINE Alu -18 115 1 429 202 53 0 chr17 22685810 22685904 -66818649 + MER113 DNA MER1_type? 361 459 -62 399 316 71 0 chr17 22686343 22686498 -66818055 + Charlie8 DNA MER1_type 1 166 -2251 2051 116 11 0 chr17 22686506 22686812 -66817741 + AluSq SINE Alu 9 317 0 22 35 0 0 chr17 22686830 22686859 -66817694 + AT_rich Low_complexity Low_complexity 1 29 0 2206 106 3 10 chr17 22686915 22687218 -66817335 - AluSq SINE Alu -12 301 1 772 202 35 6 chr17 22687778 22687951 -66816602 + MER45A DNA AcHobo 1 178 0 339 266 65 65 chr17 22688386 22688540 -66816013 - MIR SINE MIR -5 257 104 822 273 206 5 chr17 22688544 22688951 -66815602 + L2 LINE L2 2053 2541 -773 2100 146 28 0 chr17 22688969 22689325 -66815228 - MER47A DNA MER2_type 0 366 1 401 137 0 0 chr17 22689358 22689431 -66815122 + L1M4 LINE L1 5128 5200 -946 2075 152 0 3 chr17 22689433 22689743 -66814810 + AluSx SINE Alu 1 309 -3 565 283 108 18 chr17 22689743 22690029 -66814524 - L2 LINE L2 -855 2459 2148 195 42 0 0 chr17 22690095 22690119 -66814434 + (TCTCC)n Simple_repeat Simple_repeat 2 25 0 1825 178 10 0 chr17 22690119 22690484 -66814069 - AluJb SINE Alu -4 400 7 188 268 37 0 chr17 22690569 22690651 -66813902 - L2 LINE L2 -1189 2125 2041 231 36 0 0 chr17 22691267 22691295 -66813258 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 1660 158 7 58 chr17 22691300 22691592 -66812961 - AluSx SINE Alu -35 277 1 189 121 0 0 chr17 22693465 22693498 -66811055 + (CAT)n Simple_repeat Simple_repeat 2 34 0 190 225 25 0 chr17 22695038 22695118 -66809435 + (CTTA)n Simple_repeat Simple_repeat 2 83 0 383 95 0 0 chr17 22696902 22696965 -66807588 - L1MD1 LINE L1 -8 6234 6172 930 170 12 6 chr17 22696965 22697130 -66807423 + FRAM SINE Alu 1 166 0 1352 171 101 0 chr17 22697154 22697440 -66807113 + Tigger1 DNA MER2_type 1 315 -2103 611 138 0 0 chr17 22697441 22697535 -66807018 - AluJb SINE Alu -13 299 206 6190 133 21 4 chr17 22697537 22698542 -66806011 + Tigger1 DNA MER2_type 1006 2027 -391 2088 131 6 3 chr17 22698821 22699133 -66805420 - AluSq SINE Alu 0 313 1 1918 127 3 11 chr17 22699328 22699612 -66804941 + AluSx SINE Alu 1 282 -30 2588 37 3 3 chr17 22699614 22699910 -66804643 - AluY SINE Alu -15 296 1 2095 116 6 35 chr17 22699956 22700095 -66804458 + AluSx SINE Alu 1 142 -170 2396 75 13 0 chr17 22700095 22700402 -66804151 + AluY SINE Alu 1 311 0 2095 116 6 35 chr17 22700402 22700581 -66803972 + AluSx SINE Alu 142 310 -2 217 333 16 0 chr17 22700742 22700805 -66803748 + MIR SINE MIR 14 77 -185 185 221 145 99 chr17 22700808 22700939 -66803614 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 22702008 22702036 -66802517 + AT_rich Low_complexity Low_complexity 1 28 0 196 229 145 99 chr17 22702335 22702466 -66802087 - MIR SINE MIR -82 180 44 192 250 23 0 chr17 22702469 22702513 -66802040 - MIR SINE MIR -185 77 33 326 261 126 8 chr17 22703085 22703204 -66801349 + MIR SINE MIR 7 139 -123 507 264 150 66 chr17 22703217 22703583 -66800970 - L2 LINE L2 -20 3252 2857 508 298 53 27 chr17 22703841 22703991 -66800562 + MIR3 SINE MIR 33 185 -42 393 272 31 63 chr17 22705485 22705676 -66798877 + MIR SINE MIR 28 212 -50 4719 263 100 38 chr17 22707400 22707690 -66796863 + HAL1 LINE L1 64 335 -2172 2319 80 0 3 chr17 22707690 22707991 -66796562 + AluY SINE Alu 1 300 -11 4719 263 100 38 chr17 22707991 22708660 -66795893 + HAL1 LINE L1 335 962 -1545 1877 166 0 0 chr17 22708660 22708956 -66795597 - AluJb SINE Alu -16 296 1 4719 263 100 38 chr17 22708956 22710182 -66794371 + HAL1 LINE L1 962 2384 -123 3648 59 0 0 chr17 22710247 22710691 -66793862 + L1PA6 LINE L1 5711 6154 0 2261 84 0 10 chr17 22710696 22710992 -66793561 + AluY SINE Alu 1 293 -18 27 0 0 0 chr17 22711018 22711045 -66793508 + AT_rich Low_complexity Low_complexity 1 27 0 450 298 13 20 chr17 22711634 22711806 -66792747 + MIR SINE MIR 3 174 -88 320 276 118 7 chr17 22715493 22715645 -66788908 + MIR3 SINE MIR 33 201 -7 396 268 39 0 chr17 22715724 22715851 -66788702 + MIR SINE MIR 20 151 -111 213 349 73 0 chr17 22716370 22716479 -66788074 - MIR SINE MIR -95 167 51 291 208 38 85 chr17 22716551 22716657 -66787896 - MIR SINE MIR -64 144 44 5650 128 26 25 chr17 22717091 22718028 -66786525 - LTR5 LTR ERVK 0 969 32 436 258 65 0 chr17 22719441 22719565 -66784988 + MIR SINE MIR 88 219 -43 301 274 108 38 chr17 22719590 22719776 -66784777 - L2 LINE L2 -12 3301 3103 182 326 22 56 chr17 22721213 22721302 -66783251 + MIR SINE MIR 61 146 -62 224 250 48 77 chr17 22722586 22722690 -66781863 - MIR SINE MIR -60 148 48 277 314 43 31 chr17 22730948 22731206 -66773347 + L2 LINE L2 2498 2758 -556 294 303 110 0 chr17 22732420 22732529 -66772024 + MIR3 SINE MIR 81 201 -7 216 0 0 0 chr17 22732860 22732884 -66771669 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 347 309 88 0 chr17 22733492 22733628 -66770925 + MIR SINE MIR 81 228 -34 2135 160 35 2 chr17 22734590 22734990 -66769563 + L1PB4 LINE L1 5539 5951 -205 1405 43 0 134 chr17 22734990 22735222 -66769331 - LTR14A LTR ERVK -143 201 1 198 253 27 40 chr17 22735289 22735364 -66769189 - MIR SINE MIR -133 129 56 510 294 76 0 chr17 22735414 22735598 -66768955 - L2 LINE L2 0 3313 3116 306 188 38 38 chr17 22735625 22735705 -66768848 - MER3 DNA MER1_type -5 204 125 2354 77 3 3 chr17 22735706 22736016 -66768537 + AluY SINE Alu 1 310 -1 216 333 16 0 chr17 22736113 22736176 -66768377 + MIR SINE MIR 14 77 -185 223 221 145 99 chr17 22736179 22736310 -66768243 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 22736609 22736637 -66767916 + AT_rich Low_complexity Low_complexity 1 28 0 183 214 145 99 chr17 22737707 22737838 -66766715 - MIR SINE MIR -82 180 44 216 333 16 0 chr17 22737841 22737904 -66766649 - MIR SINE MIR -185 77 14 2004 142 3 0 chr17 22738059 22738370 -66766183 - AluSx SINE Alu 0 312 1 1739 218 30 28 chr17 22738370 22738434 -66766119 - MLT1C-int LTR MaLR -752 619 557 1499 167 37 27 chr17 22738434 22738728 -66765825 - AluSx SINE Alu -15 297 1 1739 218 30 28 chr17 22738728 22739098 -66765455 - MLT1C-int LTR MaLR -814 557 184 1965 145 10 0 chr17 22739347 22739650 -66764903 + AluSq SINE Alu 1 306 -7 232 359 33 0 chr17 22739782 22739874 -66764679 + L2 LINE L2 3192 3286 -27 1205 241 87 34 chr17 22740510 22740946 -66763607 - MLT1C LTR MaLR 0 467 9 2082 63 4 7 chr17 22741371 22741668 -66762885 + AluY SINE Alu 17 312 0 2154 92 3 0 chr17 22742116 22742411 -66762142 - AluSg SINE Alu -14 296 1 269 342 0 51 chr17 22742430 22742588 -66761965 + C-rich Low_complexity Low_complexity 2 151 0 208 274 0 0 chr17 22742644 22742695 -66761858 + (CGG)n Simple_repeat Simple_repeat 2 52 0 243 365 14 7 chr17 22743066 22743214 -66761339 + G-rich Low_complexity Low_complexity 2 150 0 296 285 38 13 chr17 22743239 22743495 -66761058 + GA-rich Low_complexity Low_complexity 1 262 0 450 309 11 28 chr17 22743743 22743924 -66760629 + G-rich Low_complexity Low_complexity 3 180 0 402 317 0 38 chr17 22743976 22744162 -66760391 + G-rich Low_complexity Low_complexity 2 180 0 805 203 6 0 chr17 22745120 22745278 -66759275 + AluJb SINE Alu 1 159 -153 2155 76 45 0 chr17 22746939 22747227 -66757326 - AluY SINE Alu -10 301 1 402 68 17 0 chr17 22748290 22748349 -66756204 + HY3 scRNA scRNA 18 77 -24 1993 124 23 0 chr17 22748802 22749101 -66755452 + AluSx SINE Alu 3 308 -4 24 0 0 0 chr17 22749121 22749145 -66755408 + AT_rich Low_complexity Low_complexity 1 24 0 383 327 45 71 chr17 22749594 22749831 -66754722 + HAL1 LINE L1 904 1135 -1372 1848 89 4 0 chr17 22749831 22750079 -66754474 + AluY SINE Alu 1 249 -62 383 327 45 71 chr17 22750079 22750107 -66754446 + HAL1 LINE L1 1135 1162 -1345 219 381 77 5 chr17 22750115 22750309 -66754244 + L2 LINE L2 2542 2749 -565 3471 112 27 24 chr17 22750323 22751072 -66753481 - L1PA13 LINE L1 0 6154 5384 411 273 13 67 chr17 22751332 22751564 -66752989 + LTR41 LTR ERVL 469 712 -61 935 83 91 224 chr17 22751564 22751650 -66752903 - MER30 DNA MER1_type -1 229 133 1879 130 7 13 chr17 22751650 22751949 -66752604 + AluSx SINE Alu 1 297 -15 1981 115 27 14 chr17 22751951 22752246 -66752307 + AluSc SINE Alu 1 299 -10 935 83 91 224 chr17 22752246 22752420 -66752133 - MER30 DNA MER1_type -98 132 1 411 273 13 67 chr17 22752420 22752511 -66752042 + LTR41 LTR ERVL 712 761 -12 230 335 185 28 chr17 22752522 22752980 -66751573 + L2 LINE L2 2787 3312 -1 520 293 60 24 chr17 22753034 22753283 -66751270 + MIR SINE MIR 2 259 -3 1261 306 35 16 chr17 22757260 22757926 -66746627 - L1MC3 LINE L1 -1629 6156 5479 230 349 28 46 chr17 22762650 22762759 -66741794 + MIR SINE MIR 82 188 -74 1321 176 111 29 chr17 22763153 22763494 -66741059 - THE1C LTR MaLR 0 375 7 183 80 0 0 chr17 22764042 22764067 -66740486 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 204 163 0 0 chr17 22764554 22764597 -66739956 + C-rich Low_complexity Low_complexity 4 46 0 246 273 0 34 chr17 22764896 22764984 -66739569 + GA-rich Low_complexity Low_complexity 6 90 0 636 292 36 24 chr17 22765039 22765289 -66739264 + MER89-int LTR ERV1 1407 1659 -5142 269 266 93 29 chr17 22766713 22766852 -66737701 + L1MEc LINE L1 1910 2057 -4339 291 54 0 0 chr17 22766880 22766917 -66737636 + (TA)n Simple_repeat Simple_repeat 2 38 0 1531 189 3 14 chr17 22766932 22767217 -66737336 - AluJb SINE Alu -30 282 1 904 241 13 47 chr17 22767272 22767504 -66737049 + MER58A DNA MER1_type 1 224 0 428 278 95 18 chr17 22767506 22767675 -66736878 - L2 LINE L2 -653 2661 2480 2383 73 0 16 chr17 22767746 22768061 -66736492 + AluY SINE Alu 1 310 -1 1805 157 29 76 chr17 22768523 22768932 -66735621 + MLT1B LTR MaLR 1 390 0 296 209 12 31 chr17 22769862 22770025 -66734528 + CT-rich Low_complexity Low_complexity 2 161 0 1912 144 0 13 chr17 22770197 22770495 -66734058 - AluJb SINE Alu -16 296 3 1630 133 133 15 chr17 22770496 22770760 -66733793 - AluJo SINE Alu -7 295 1 382 241 76 21 chr17 22770761 22770906 -66733647 - MER106A DNA MER1_type -79 157 5 2125 107 0 0 chr17 22770957 22771247 -66733306 - AluSx SINE Alu -15 297 8 238 211 13 40 chr17 22771484 22771560 -66732993 + (CCCCG)n Simple_repeat Simple_repeat 1 74 0 253 239 87 76 chr17 22772888 22773072 -66731481 + L2 LINE L2 2870 3055 -217 856 283 36 12 chr17 22774935 22775182 -66729371 + MIR SINE MIR 9 261 -1 515 283 51 0 chr17 22775169 22775307 -66729246 + L2 LINE L2 3169 3313 0 * 1860 151 0 13 chr17 22775851 22776149 -66728404 - AluJb SINE Alu -16 296 3 1429 150 135 22 chr17 22776150 22776417 -66728136 - AluJo SINE Alu -15 297 1 2255 97 0 0 chr17 22777699 22777997 -66726556 - AluSx SINE Alu -14 298 1 2298 103 0 0 chr17 22778939 22779249 -66725304 - AluSx SINE Alu -2 310 1 1263 170 6 45 chr17 22779328 22779643 -66724910 + MLT1D LTR MaLR 218 505 0 1847 107 38 0 chr17 22779911 22780172 -66724381 - AluSx SINE Alu -9 303 33 1021 76 8 0 chr17 22780172 22780303 -66724250 - AluSq/x SINE Alu -180 132 1 1442 202 4 4 chr17 22780322 22780579 -66723974 + AluJo SINE Alu 43 299 -13 1728 231 28 11 chr17 22780588 22781021 -66723532 - MLT1D LTR MaLR -53 452 13 225 108 27 0 chr17 22781023 22781060 -66723493 - MLT1D LTR MaLR -467 38 1 2576 58 0 0 chr17 22781117 22781428 -66723125 - AluY SINE Alu 0 311 1 963 118 0 7 chr17 22781428 22781564 -66722989 - AluSq/x SINE Alu -177 135 1 1849 136 25 0 chr17 22781564 22781850 -66722703 - AluSq SINE Alu -9 304 12 2087 132 3 0 chr17 22781870 22782166 -66722387 - AluSq SINE Alu -10 303 7 251 284 93 38 chr17 22782182 22782365 -66722188 + MLT1K LTR MaLR 349 541 -47 728 297 52 0 chr17 22782389 22782621 -66721932 - MIR SINE MIR -11 251 8 556 274 18 50 chr17 22782630 22782695 -66721858 - LTR16C LTR ERVL -10 481 415 2151 120 10 0 chr17 22782695 22782996 -66721557 - AluSx SINE Alu 0 312 9 556 274 18 50 chr17 22782996 22783149 -66721404 - LTR16C LTR ERVL -76 415 270 670 222 149 0 chr17 22783368 22783562 -66720991 - MLT1G3 LTR MaLR -230 300 78 257 204 0 20 chr17 22783562 22783611 -66720942 + polypyrimidine Low_complexity Low_complexity 1 48 0 2193 129 0 0 chr17 22783611 22783920 -66720633 - AluSg SINE Alu -1 309 1 501 206 28 0 chr17 22783921 22784062 -66720491 + CT-rich Low_complexity Low_complexity 2 146 0 610 196 22 73 chr17 22784080 22784259 -66720294 + L1 LINE L1 4821 4990 -1156 1666 180 27 13 chr17 22784280 22784580 -66719973 - AluJb SINE Alu -8 304 1 2145 126 0 7 chr17 22784592 22784902 -66719651 - AluSx SINE Alu 0 312 5 326 235 17 59 chr17 22785003 22785122 -66719431 + MLT1J LTR MaLR 388 501 -10 2122 78 7 11 chr17 22785359 22785665 -66718888 + AluSg SINE Alu 1 305 0 818 150 7 43 chr17 22785875 22786015 -66718538 + AluJo SINE Alu 1 135 -177 1809 176 3 22 chr17 22786015 22786328 -66718225 + AluJo SINE Alu 1 307 -5 812 246 55 123 chr17 22786353 22786501 -66718052 + L1MEc LINE L1 2152 2309 -3906 2358 91 0 0 chr17 22786501 22786810 -66717743 + AluY SINE Alu 1 309 -2 812 246 55 123 chr17 22786810 22787020 -66717533 + L1MEc LINE L1 2309 2402 -3813 1820 143 14 0 chr17 22787020 22787300 -66717253 + AluSx SINE Alu 29 312 0 812 246 55 123 chr17 22787300 22787625 -66716928 + L1MEc LINE L1 2402 2748 -3467 794 197 0 7 chr17 22787662 22787804 -66716749 - AluJo SINE Alu -52 260 120 812 150 14 43 chr17 22787847 22787987 -66716566 - AluJo SINE Alu -176 136 1 2381 85 0 0 chr17 22788005 22788310 -66716243 + AluSc SINE Alu 1 305 -4 1878 125 12 60 chr17 22788324 22788643 -66715910 + AluSx SINE Alu 1 304 -8 385 270 133 0 chr17 22788649 22788778 -66715775 + L1MC/D LINE L1 5488 5634 -522 2111 132 0 0 chr17 22788798 22789094 -66715459 + AluSx SINE Alu 1 296 -16 2024 126 0 40 chr17 22789096 22789241 -66715312 + AluSx SINE Alu 1 150 -162 2337 73 3 0 chr17 22789241 22789544 -66715009 + AluY SINE Alu 1 304 -7 2024 126 0 40 chr17 22789544 22789723 -66714830 + AluSx SINE Alu 150 312 0 2159 101 0 10 chr17 22789745 22789880 -66714673 + AluSx SINE Alu 1 136 -176 2274 88 0 0 chr17 22789880 22790176 -66714377 + AluY SINE Alu 1 296 -15 2159 101 0 10 chr17 22790176 22790338 -66714215 + AluSx SINE Alu 136 295 -17 1847 149 16 13 chr17 22790341 22790650 -66713903 - AluJb SINE Alu 0 312 3 690 124 0 0 chr17 22790797 22790902 -66713651 - AluSg/x SINE Alu -3 307 203 318 109 0 0 chr17 22790929 22790984 -66713569 + Alu SINE Alu 248 302 0 367 332 137 34 chr17 22791842 22792047 -66712506 - MIR SINE MIR -19 243 18 2221 114 0 9 chr17 22792321 22792636 -66711917 + AluSx SINE Alu 1 312 0 263 265 217 0 chr17 22792757 22792840 -66711713 + MIR SINE MIR 52 152 -110 1602 164 13 7 chr17 22793139 22793438 -66711115 - AluY SINE Alu -10 301 1 2209 106 0 13 chr17 22793441 22793616 -66710937 - AluSx SINE Alu -5 307 136 2080 112 23 3 chr17 22793616 22793921 -66710632 - AluSx SINE Alu -1 311 1 2209 106 0 13 chr17 22793921 22794056 -66710497 - AluSx SINE Alu -176 136 1 318 204 11 11 chr17 22794059 22794147 -66710406 - FLAM_A SINE Alu 0 133 46 270 233 159 91 chr17 22794155 22794331 -66710222 + L2 LINE L2 2886 3073 -240 1857 156 0 9 chr17 22794354 22794669 -66709884 - AluJb SINE Alu 0 312 1 2149 113 0 3 chr17 22794676 22794978 -66709575 - AluSx SINE Alu -11 301 1 2078 133 0 0 chr17 22794984 22795278 -66709275 - AluSc SINE Alu -15 294 1 1589 157 88 7 chr17 22795278 22795552 -66709001 - AluSx SINE Alu -16 296 1 778 193 7 0 chr17 22795552 22795687 -66708866 - AluJb SINE Alu -176 136 1 1958 113 57 0 chr17 22795688 22795970 -66708583 - AluSg SINE Alu -12 298 1 1857 154 0 4 chr17 22796044 22796324 -66708229 - AluJb SINE Alu -33 279 1 2129 103 7 0 chr17 22796443 22796734 -66707819 - AluSc SINE Alu -16 293 1 1873 73 114 15 chr17 22796750 22797023 -66707530 + AluY SINE Alu 1 300 -11 599 160 328 0 chr17 22797033 22797164 -66707389 - AluJo SINE Alu -138 174 1 2223 107 0 3 chr17 22797577 22797886 -66706667 - AluSc SINE Alu -1 308 1 1998 107 38 3 chr17 22798253 22798542 -66706011 + AluSx SINE Alu 1 299 -13 1788 117 53 0 chr17 22798548 22798845 -66705708 + AluY SINE Alu 5 315 0 1259 113 0 5 chr17 22799316 22799495 -66705058 - AluSq SINE Alu -1 312 134 2494 59 0 3 chr17 22799495 22799798 -66704755 - AluY SINE Alu -9 302 1 2405 65 0 37 chr17 22799805 22800128 -66704425 - AluY SINE Alu 0 311 1 2176 102 0 13 chr17 22800271 22800440 -66704113 - AluSq SINE Alu -12 301 136 2387 71 3 7 chr17 22800440 22800750 -66703803 - AluSp SINE Alu -4 309 1 2176 102 0 13 chr17 22800750 22800885 -66703668 - AluSq SINE Alu -177 136 1 216 123 18 35 chr17 22801956 22802013 -66702540 + CT-rich Low_complexity Low_complexity 1 56 0 1677 160 33 26 chr17 22802042 22802348 -66702205 - AluJb SINE Alu -4 308 1 2374 50 7 3 chr17 22802440 22802738 -66701815 + AluY SINE Alu 1 299 -12 1647 175 7 17 chr17 22802741 22803038 -66701515 + AluJo SINE Alu 1 294 -18 2062 100 0 55 chr17 22803098 22803409 -66701144 - AluSc SINE Alu -15 294 1 2246 83 6 19 chr17 22803440 22803752 -66700801 + AluY SINE Alu 1 308 -3 25 31 0 0 chr17 22803772 22803804 -66700749 + AT_rich Low_complexity Low_complexity 1 32 0 2368 87 0 0 chr17 22803853 22804154 -66700399 + AluSx SINE Alu 15 301 -11 1600 188 33 0 chr17 22804251 22804522 -66700031 - AluJo SINE Alu -32 280 1 249 0 31 0 chr17 22804522 22804554 -66699999 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2485 39 0 11 chr17 22804554 22804839 -66699714 - AluY SINE Alu -29 282 1 2355 108 3 0 chr17 22804841 22805147 -66699406 - AluSp SINE Alu -6 307 1 1579 213 3 3 chr17 22805154 22805441 -66699112 - AluJo SINE Alu -17 295 9 2387 76 0 0 chr17 22805457 22805748 -66698805 - AluSx SINE Alu -21 291 1 767 134 7 42 chr17 22805748 22805890 -66698663 - L1MB2 LINE L1 -220 5951 5815 1861 148 43 13 chr17 22805890 22806193 -66698360 - AluJo SINE Alu 0 312 1 2387 79 3 10 chr17 22806666 22806970 -66697583 + AluSp SINE Alu 1 302 -11 1675 184 29 9 chr17 22807934 22808276 -66696277 + MER47A DNA MER2_type 18 366 0 485 260 92 23 chr17 22808730 22808903 -66695650 - Zaphod DNA AcHobo -2146 1885 1701 2126 137 0 3 chr17 22808903 22809210 -66695343 + AluSq SINE Alu 1 306 -7 1053 87 0 0 chr17 22809210 22809337 -66695216 + AluSg SINE Alu 1 127 -183 2211 110 3 0 chr17 22809338 22809628 -66694925 + AluSx SINE Alu 11 301 -11 198 0 0 0 chr17 22810286 22810308 -66694245 + (T)n Simple_repeat Simple_repeat 1 22 0 785 152 0 8 chr17 22810367 22810499 -66694054 - FLAM_C SINE Alu 0 133 3 2134 135 0 0 chr17 22810945 22811248 -66693305 - AluJb SINE Alu -9 303 1 2260 121 3 0 chr17 22811254 22811559 -66692994 - AluSq SINE Alu -7 306 1 2188 144 30 62 chr17 22811672 22811907 -66692646 - L1MA7 LINE L1 0 6291 6050 198 0 0 0 chr17 22811907 22811929 -66692624 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 2363 104 0 0 chr17 22811932 22812231 -66692322 - AluSx SINE Alu -12 300 2 2188 144 30 62 chr17 22812231 22812272 -66692281 - L1MA7 LINE L1 -243 6048 6007 2099 122 10 0 chr17 22812272 22812560 -66691993 + AluJb SINE Alu 1 291 -21 2188 144 30 62 chr17 22812560 22812860 -66691693 - L1MA7 LINE L1 -284 6007 5621 402 310 111 18 chr17 22812863 22813089 -66691464 - L1M4 LINE L1 -1155 4991 4745 359 271 85 20 chr17 22813167 22813211 -66691342 - L1M4 LINE L1 -1768 4378 4338 2538 70 0 25 chr17 22813211 22813527 -66691026 - AluY SINE Alu -3 308 1 359 271 85 20 chr17 22813527 22813752 -66690801 - L1M4 LINE L1 -1808 4338 4072 2467 92 0 0 chr17 22815026 22815332 -66689221 + AluY SINE Alu 1 306 -5 10780 39 15 105 chr17 22815819 22817342 -66687211 - SVA Other Other 0 1386 1 846 226 34 34 chr17 22817583 22817817 -66686736 + MIR SINE MIR 28 261 -1 1760 159 0 4 chr17 22817929 22818200 -66686353 - AluJb SINE Alu -19 293 24 2161 128 3 3 chr17 22818205 22818502 -66686051 - AluSq SINE Alu -16 297 1 2551 79 0 0 chr17 22818586 22818889 -66685664 - AluSg SINE Alu -7 303 1 191 312 91 0 chr17 22820194 22820271 -66684282 - L3 LINE CR1 -453 1124 1041 1910 144 0 50 chr17 22820497 22820644 -66683909 + AluJb SINE Alu 1 125 -187 2294 95 0 10 chr17 22820644 22820939 -66683614 + AluSx SINE Alu 1 292 -20 1910 144 0 50 chr17 22820939 22821110 -66683443 + AluJb SINE Alu 125 303 -9 2257 120 3 13 chr17 22821117 22821433 -66683120 + AluSq SINE Alu 1 313 0 257 262 71 50 chr17 22822257 22822398 -66682155 + MER91B DNA MER1_type 42 185 -5 1759 98 29 138 chr17 22822734 22823112 -66681441 + MER1B DNA MER1_type 1 337 0 353 290 91 45 chr17 22823375 22823551 -66681002 - MIR SINE MIR -33 229 46 2282 116 0 0 chr17 22824450 22824744 -66679809 + AluSx SINE Alu 1 294 -18 1832 127 81 3 chr17 22824747 22825030 -66679523 + AluSc SINE Alu 1 305 -4 2390 71 3 10 chr17 22828811 22829108 -66675445 - AluSq SINE Alu -18 295 1 2458 95 0 0 chr17 22832575 22832879 -66671674 + AluY SINE Alu 1 304 -7 370 190 134 145 chr17 22832955 22833040 -66671513 + MIR SINE MIR 65 149 -113 1740 172 29 0 chr17 22833040 22833319 -66671234 - AluJo SINE Alu -16 296 10 370 190 134 145 chr17 22833319 22833412 -66671141 + MIR SINE MIR 149 241 -21 199 344 62 31 chr17 22833780 22833940 -66670613 - L2 LINE L2 -8 3264 3100 281 227 52 31 chr17 22834672 22834769 -66669784 - MIR SINE MIR -126 136 38 1822 154 42 0 chr17 22834892 22835177 -66669376 + AluSg SINE Alu 14 310 0 254 308 0 13 chr17 22836104 22836182 -66668371 + MER5B DNA MER1_type 64 140 -38 2380 104 0 0 chr17 22836182 22836490 -66668063 + AluSq SINE Alu 1 308 -5 386 256 44 29 chr17 22836528 22836665 -66667888 - MIR3 SINE MIR -33 175 37 184 264 19 0 chr17 22840394 22840447 -66664106 + L2 LINE L2 2586 2639 -675 2203 109 26 3 chr17 22841747 22842051 -66662502 - AluSq SINE Alu -2 311 1 382 283 68 61 chr17 22843005 22843284 -66661269 + L2 LINE L2 3017 3297 -16 2120 127 0 0 chr17 22843292 22843583 -66660970 + AluSx SINE Alu 1 291 -21 2520 81 0 0 chr17 22843586 22843884 -66660669 + AluY SINE Alu 1 298 -13 3560 172 32 59 chr17 22844100 22844432 -66660121 - L1MB5 LINE L1 -13 6161 5821 2308 107 0 10 chr17 22844432 22844741 -66659812 - AluSg SINE Alu -4 306 1 3560 172 32 59 chr17 22844741 22844877 -66659676 - L1MB5 LINE L1 -353 5821 5683 2580 60 0 3 chr17 22844877 22845179 -66659374 + AluY SINE Alu 2 302 -9 3560 172 32 59 chr17 22845179 22845219 -66659334 - L1MB5 LINE L1 -491 5683 5643 1991 114 7 4 chr17 22845219 22845491 -66659062 - AluSx SINE Alu -5 307 35 3560 172 32 59 chr17 22845491 22845822 -66658731 - L1MB5 LINE L1 -531 5643 5343 265 266 0 0 chr17 22845819 22845883 -66658670 - L1MB5 LINE L1 -1025 5121 5058 * 2318 103 0 28 chr17 22846635 22846954 -66657599 - AluSx SINE Alu 0 312 3 1770 155 28 3 chr17 22846954 22847245 -66657308 - AluSx SINE Alu -9 303 6 2238 106 0 0 chr17 22847251 22847567 -66656986 - AluY SINE Alu 0 317 2 1558 170 24 34 chr17 22848219 22848513 -66656040 + AluJb SINE Alu 1 291 -21 2175 127 3 0 chr17 22848644 22848965 -66655588 - AluSq SINE Alu 0 313 1 2433 64 0 0 chr17 22849018 22849328 -66655225 - AluY SINE Alu 0 310 1 207 182 0 0 chr17 22849371 22849404 -66655149 + (CGTG)n Simple_repeat Simple_repeat 1 33 0 334 346 25 31 chr17 22849881 22850043 -66654510 + MIR SINE MIR 59 219 -43 180 0 0 0 chr17 22850116 22850136 -66654417 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2325 96 7 0 chr17 22850616 22850907 -66653646 + AluSx SINE Alu 1 293 -19 3888 176 46 54 chr17 22850940 22851917 -66652636 - LTR5 LTR ERVK 0 969 1 191 284 91 34 chr17 22853294 22853382 -66651171 - MIR3 SINE MIR -11 197 105 195 221 63 63 chr17 22853568 22853663 -66650890 - MIR3 SINE MIR -106 102 8 354 265 130 25 chr17 22853822 22853984 -66650569 - MIR SINE MIR -21 241 63 1317 188 9 0 chr17 22854110 22854333 -66650220 + AluJb SINE Alu 84 308 -4 2222 124 7 0 chr17 22854458 22854764 -66649789 - AluSc SINE Alu 0 309 2 442 125 0 0 chr17 22854839 22854903 -66649650 + FLAM SINE Alu 54 117 -26 1199 192 0 22 chr17 22855508 22855737 -66648816 - AluJo SINE Alu -88 224 1 23 0 0 0 chr17 22855750 22855773 -66648780 + AT_rich Low_complexity Low_complexity 1 23 0 7019 55 22 42 chr17 22855810 22857459 -66647094 - SVA Other Other -723 1386 5 2089 93 4 0 chr17 22857459 22857737 -66646816 - AluSp SINE Alu -34 279 1 2159 89 0 0 chr17 22858276 22858581 -66645972 - AluSc SINE Alu 0 305 1 180 269 0 90 chr17 22858734 22858812 -66645741 + MER5A DNA MER1_type 3 73 -116 2266 71 3 3 chr17 22858815 22859110 -66645443 + AluY SINE Alu 1 295 -16 2020 103 17 0 chr17 22859122 22859413 -66645140 + AluSq SINE Alu 1 296 -17 2037 104 21 0 chr17 22859433 22859720 -66644833 + AluSx SINE Alu 1 293 -19 696 157 0 0 chr17 22859732 22859834 -66644719 + FLAM_C SINE Alu 2 103 -40 186 318 0 0 chr17 22859868 22859912 -66644641 + MER5A DNA MER1_type 145 188 -1 2182 114 0 0 chr17 22860252 22860560 -66643993 + AluSc SINE Alu 1 308 -1 492 205 86 0 chr17 22860838 22860955 -66643598 + MER33 DNA MER1_type 25 151 -173 2188 86 0 0 chr17 22860986 22861265 -66643288 + AluSg SINE Alu 2 280 -30 1599 191 7 3 chr17 22861293 22861597 -66642956 + AluJb SINE Alu 1 305 -7 300 183 0 33 chr17 22862846 22862868 -66641685 - L1ME4a LINE L1 -2 6119 6098 2055 120 3 0 chr17 22862868 22863159 -66641394 + AluSc SINE Alu 1 292 -17 300 183 0 33 chr17 22863159 22863196 -66641357 - L1ME4a LINE L1 -23 6098 6062 280 301 166 16 chr17 22863225 22863418 -66641135 - L1ME LINE L1 -314 5807 5586 471 244 195 32 chr17 22864341 22864562 -66639991 - MIR SINE MIR -5 257 1 234 244 191 9 chr17 22864670 22864785 -66639768 + Charlie8 DNA MER1_type 86 221 -2196 779 174 0 0 chr17 22865187 22865302 -66639251 + AluJo/FLAM SINE Alu 1 115 -187 445 139 0 15 chr17 22865303 22865556 -66638997 + AluSq SINE Alu 2 317 0 2107 106 0 7 chr17 22865565 22865857 -66638696 + AluSx SINE Alu 1 290 -22 292 188 130 0 chr17 22865875 22865944 -66638609 + AluSp SINE Alu 149 226 -77 35 33 0 17 chr17 22866400 22866438 -66638115 + AT_rich Low_complexity Low_complexity 1 39 -20 1883 134 31 0 chr17 22866438 22866728 -66637825 + AluSg SINE Alu 1 299 -11 35 33 0 17 chr17 22866728 22866749 -66637804 + AT_rich Low_complexity Low_complexity 39 59 0 405 175 126 10 chr17 22866749 22866852 -66637701 - L1MB8 LINE L1 -1 6177 6063 2074 102 6 19 chr17 22866853 22867167 -66637386 - AluSq SINE Alu -3 310 1 1171 178 87 73 chr17 22867177 22867326 -66637227 - AluJo SINE Alu -12 290 134 2078 116 26 0 chr17 22867326 22867628 -66636925 - AluSx SINE Alu -2 310 1 1171 178 87 73 chr17 22867628 22867764 -66636789 - AluJo SINE Alu -168 134 1 1656 106 0 0 chr17 22867796 22868022 -66636531 + AluSq SINE Alu 1 226 -87 1660 177 32 0 chr17 22868022 22868332 -66636221 - L1MB8 LINE L1 -430 5754 5435 1829 121 6 46 chr17 22868333 22868656 -66635897 - AluY SINE Alu -1 310 1 767 101 0 32 chr17 22868782 22868954 -66635599 + L1PBa LINE L1 1513 1778 -5085 897 111 7 0 chr17 22868954 22869089 -66635464 + L1PB2 LINE L1 6015 6150 -1 767 101 0 32 chr17 22869089 22869103 -66635450 + L1PBa LINE L1 1778 1791 -5072 580 259 42 19 chr17 22869101 22869364 -66635189 + L1M4 LINE L1 2780 3048 -3098 * 553 223 54 67 chr17 22869373 22869597 -66634956 + L1M4 LINE L1 454 674 -5868 459 249 61 69 chr17 22869583 22869929 -66634624 + L1M1 LINE L1 2932 3274 -4291 * 267 108 0 0 chr17 22869930 22869993 -66634560 - Alu SINE Alu 0 308 246 284 121 0 17 chr17 22870093 22870151 -66634402 + AluSp/q SINE Alu 243 299 -4 281 233 240 53 chr17 22870568 22870718 -66633835 + MIR SINE MIR 70 247 -15 2371 185 73 14 chr17 22872484 22873003 -66631550 + MER68 LTR ERV1 1 550 -12 1034 169 97 147 chr17 22873585 22873780 -66630773 + L1MC5 LINE L1 6732 6935 -1026 1629 183 6 6 chr17 22873780 22874092 -66630461 + AluJb SINE Alu 1 312 0 1034 169 97 147 chr17 22874092 22874380 -66630173 + L1MC5 LINE L1 6935 7191 -770 674 186 174 12 chr17 22874395 22874556 -66629997 - MER20 DNA MER1_type 0 219 33 750 179 201 22 chr17 22874573 22874605 -66629948 + L1MC5 LINE L1 7203 7228 -733 333 0 0 0 chr17 22874605 22874642 -66629911 + (CA)n Simple_repeat Simple_repeat 2 38 0 750 179 201 22 chr17 22874642 22874877 -66629676 + L1MC5 LINE L1 7228 7518 -443 21 36 0 0 chr17 22875430 22875458 -66629095 + AT_rich Low_complexity Low_complexity 1 28 0 218 275 122 76 chr17 22875761 22875892 -66628661 - MIR SINE MIR -82 180 44 218 349 16 0 chr17 22875895 22875958 -66628595 - MIR SINE MIR -185 77 14 2182 95 0 3 chr17 22876109 22876405 -66628148 - AluY SINE Alu -14 297 3 1486 160 46 0 chr17 22876409 22876672 -66627881 - AluSx SINE Alu -18 294 20 266 332 61 19 chr17 22876692 22876906 -66627647 + L2 LINE L2 1864 2086 -1228 247 256 26 0 chr17 22877132 22877210 -66627343 - L1MC4 LINE L1 -141 7901 7822 1739 140 46 0 chr17 22877214 22877499 -66627054 - AluSx SINE Alu -14 298 1 398 242 126 26 chr17 22877502 22877692 -66626861 - L1MC4 LINE L1 -724 7318 7110 2170 100 3 3 chr17 22877706 22878006 -66626547 - AluSc SINE Alu -9 300 1 2013 142 0 0 chr17 22878024 22878319 -66626234 - AluSg SINE Alu -15 295 1 610 140 10 0 chr17 22878328 22878428 -66626125 - AluJo/FRAM SINE Alu -9 303 203 1179 153 5 10 chr17 22878430 22878633 -66625920 - AluSx SINE Alu -78 234 33 1042 129 16 5 chr17 22878678 22878864 -66625689 - AluSg/x SINE Alu -4 305 118 614 278 32 28 chr17 22878980 22879264 -66625289 + L1M4 LINE L1 4195 4479 -1667 2289 74 0 0 chr17 22880070 22880368 -66624185 - AluY SINE Alu -12 299 2 1847 143 6 16 chr17 22880525 22880840 -66623713 + AluSx SINE Alu 1 312 0 1924 111 0 81 chr17 22880860 22881001 -66623552 + AluSx SINE Alu 1 152 -160 2319 68 3 3 chr17 22881001 22881312 -66623241 + AluY SINE Alu 1 311 0 1924 111 0 81 chr17 22881312 22881504 -66623049 + AluSx SINE Alu 152 307 -5 236 333 16 0 chr17 22881658 22881721 -66622832 + MIR SINE MIR 14 77 -185 226 229 145 99 chr17 22881724 22881855 -66622698 + MIR SINE MIR 44 180 -82 1920 134 0 0 chr17 22882430 22882714 -66621839 + AluSg SINE Alu 15 298 -12 2890 158 152 108 chr17 22882714 22882937 -66621616 - L1MC4 LINE L1 -57 7985 7773 1867 90 131 4 chr17 22882937 22883205 -66621348 - AluSx SINE Alu 0 302 1 2890 158 152 108 chr17 22883205 22883684 -66620869 - L1MC4 LINE L1 -269 7773 7227 2146 117 0 0 chr17 22883684 22883992 -66620561 - AluSx SINE Alu -4 308 1 2890 158 152 108 chr17 22883992 22884256 -66620297 - L1MC4 LINE L1 -815 7227 6976 2532 35 0 13 chr17 22884672 22884987 -66619566 - AluY SINE Alu 0 311 1 1967 121 10 22 chr17 22887028 22887342 -66617211 + AluSx SINE Alu 1 310 -2 1797 156 0 7 chr17 22887468 22887769 -66616784 - AluJb SINE Alu -9 303 5 2322 87 0 0 chr17 22888595 22888895 -66615658 - AluSq SINE Alu -13 300 1 1321 260 59 17 chr17 22889363 22889771 -66614782 + L1ME3A LINE L1 5631 6055 -115 26 0 0 0 chr17 22890134 22890160 -66614393 + AT_rich Low_complexity Low_complexity 1 26 0 2179 103 3 3 chr17 22890171 22890471 -66614082 + AluSp SINE Alu 1 300 -13 279 0 0 0 chr17 22890471 22890488 -66614065 + (CA)n Simple_repeat Simple_repeat 1 48 0 279 0 0 0 chr17 22890488 22890519 -66614034 + (CA)n Simple_repeat Simple_repeat 2 32 0 1847 134 44 7 chr17 22890959 22891257 -66613296 + AluJb SINE Alu 1 309 -3 327 312 63 63 chr17 22891543 22891613 -66612940 + MER5A DNA MER1_type 1 70 -119 2215 74 14 0 chr17 22891613 22891896 -66612657 + AluSp SINE Alu 16 302 -11 327 312 63 63 chr17 22891896 22892014 -66612539 + MER5A DNA MER1_type 69 189 0 199 306 111 14 chr17 22892120 22892192 -66612361 + MIR SINE MIR 24 102 -106 2118 108 3 19 chr17 22892218 22892532 -66612021 - AluSp SINE Alu -4 309 1 733 203 32 101 chr17 22892671 22892888 -66611665 + AluJo SINE Alu 105 306 -6 2505 133 5 5 chr17 22892892 22893284 -66611269 + L1PBa LINE L1 1012 1403 -5460 222 356 113 21 chr17 22894333 22894465 -66610088 - MIR SINE MIR -57 151 42 594 195 47 39 chr17 22894515 22894643 -66609910 + FLAM_A SINE Alu 1 129 -4 1997 111 0 3 chr17 22895060 22895348 -66609205 - AluSx SINE Alu -5 307 21 2061 116 10 0 chr17 22895387 22895689 -66608864 - AluSx SINE Alu -7 305 1 1216 169 0 5 chr17 22896146 22896347 -66608206 + AluJo SINE Alu 5 204 -108 1833 150 6 13 chr17 22896439 22896753 -66607800 - AluJb SINE Alu 0 312 1 2618 152 23 9 chr17 22896960 22897401 -66607152 - MLT1C LTR MaLR 0 467 21 2399 68 0 0 chr17 22897541 22897852 -66606701 + AluY SINE Alu 1 311 0 942 144 0 0 chr17 22897861 22898007 -66606546 + AluSc SINE Alu 145 290 -19 2459 44 3 0 chr17 22898007 22898301 -66606252 + AluY SINE Alu 1 295 -16 221 176 59 39 chr17 22898923 22898974 -66605579 - MER5A DNA MER1_type -137 52 1 374 286 18 0 chr17 22899973 22900085 -66604468 - L2 LINE L2 -5 3267 3154 493 308 153 31 chr17 22900368 22901055 -66603498 - L2 LINE L2 -231 3082 2317 3239 40 10 7 chr17 22901165 22901568 -66602985 + L1PA7 LINE L1 5751 6154 0 2305 73 3 0 chr17 22901616 22901918 -66602635 + AluY SINE Alu 1 303 -8 2445 50 3 0 chr17 22901927 22902227 -66602326 + AluY SINE Alu 1 301 -10 1007 262 34 17 chr17 22903076 22903370 -66601183 - MER89-int LTR ERV1 -5142 1659 1361 1613 207 54 6 chr17 22903379 22903712 -66600841 - MLT1A1 LTR MaLR -4 361 13 328 219 0 37 chr17 22903717 22903799 -66600754 - MER89-int LTR ERV1 -5438 1363 1285 268 356 15 0 chr17 22904921 22905056 -66599497 + (CA)n Simple_repeat Simple_repeat 1 137 0 2294 77 0 3 chr17 22908616 22908916 -66595637 + AluY SINE Alu 1 299 -12 1137 92 12 18 chr17 22908916 22909079 -66595474 + AluSc SINE Alu 132 293 -16 180 0 0 0 chr17 22909121 22909141 -66595412 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 624 130 74 0 chr17 22909147 22909255 -66595298 - AluSp/q SINE Alu -24 289 174 255 93 0 0 chr17 22909270 22909313 -66595240 + (TTGG)n Simple_repeat Simple_repeat 1 43 0 1932 115 0 10 chr17 22909313 22909601 -66594952 - AluSq SINE Alu -28 285 1 440 120 15 158 chr17 22909917 22909977 -66594576 - L1MA8 LINE L1 -69 6222 6190 1957 116 41 0 chr17 22909977 22910269 -66594284 - AluSg SINE Alu -6 304 1 440 120 15 158 chr17 22910269 22910341 -66594212 - L1MA8 LINE L1 -101 6190 6109 2310 78 0 0 chr17 22910348 22910643 -66593910 - AluY SINE Alu -16 295 1 261 0 0 0 chr17 22910904 22910933 -66593620 + (CA)n Simple_repeat Simple_repeat 2 30 0 41 21 0 0 chr17 22911032 22911080 -66593473 + GC_rich Low_complexity Low_complexity 1 48 0 22 70 0 0 chr17 22911135 22911178 -66593375 + GC_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr17 22913056 22913077 -66591476 + AT_rich Low_complexity Low_complexity 1 21 0 295 47 0 0 chr17 22913524 22913567 -66590986 + AluY SINE Alu 258 300 -1 554 245 155 23 chr17 22916971 22917236 -66587317 - L1M4 LINE L1 -1200 4946 4647 460 284 7 0 chr17 22917261 22917402 -66587151 - L1M4 LINE L1 -3324 2822 2681 2473 53 0 0 chr17 22917964 22918265 -66586288 + AluY SINE Alu 1 301 -10 906 158 36 81 chr17 22918478 22918700 -66585853 + L1MA8 LINE L1 6055 6266 -25 1392 189 0 42 chr17 22918777 22919090 -66585463 - AluJb SINE Alu -12 300 1 2027 88 14 3 chr17 22919567 22919864 -66584689 - AluSc SINE Alu -9 300 1 20071 44 2 0 chr17 22920142 22923390 -66581163 - L1PA5 LINE L1 0 6154 2933 2295 100 0 0 chr17 22923809 22924119 -66580434 - AluSg SINE Alu 0 310 1 1827 102 12 65 chr17 22924138 22924461 -66580092 - AluY SINE Alu 0 311 6 222 91 0 0 chr17 22924907 22924940 -66579613 + (CTTTG)n Simple_repeat Simple_repeat 3 35 0 641 113 0 9 chr17 22924943 22925049 -66579504 + (TTCC)n Simple_repeat Simple_repeat 4 108 0 1947 141 6 10 chr17 22925061 22925374 -66579179 - AluSx SINE Alu 0 312 1 2424 57 0 0 chr17 22925754 22926053 -66578500 - AluY SINE Alu -12 299 1 2180 107 0 3 chr17 22926053 22926353 -66578200 - AluY SINE Alu -12 299 1 244 308 15 0 chr17 22926472 22926537 -66578016 - L2 LINE L2 -20 3252 3187 2153 87 7 0 chr17 22927492 22927778 -66576775 - AluSc SINE Alu -21 288 1 1624 150 29 29 chr17 22928999 22929111 -66575442 + AluJo SINE Alu 1 112 -200 2668 130 34 0 chr17 22929111 22929525 -66575028 - MSTA LTR MaLR 0 428 1 1624 150 29 29 chr17 22929525 22929719 -66574834 + AluJo SINE Alu 111 307 -5 296 236 0 34 chr17 22932733 22932822 -66571731 + MIR SINE MIR 81 166 -96 261 0 0 0 chr17 22933356 22933385 -66571168 + (A)n Simple_repeat Simple_repeat 1 29 0 285 75 0 0 chr17 22934221 22934261 -66570292 + (A)n Simple_repeat Simple_repeat 1 40 0 1372 108 0 0 chr17 22935669 22935854 -66568699 + AluSq SINE Alu 1 185 -128 252 276 26 0 chr17 22936197 22936273 -66568280 - MER116 DNA Mariner -1 79 2 258 298 64 0 chr17 22936278 22936372 -66568181 - MIR3 SINE MIR -35 173 74 417 39 0 0 chr17 22936481 22936532 -66568021 + (CA)n Simple_repeat Simple_repeat 2 52 0 2214 102 0 0 chr17 22936550 22936843 -66567710 - AluSp SINE Alu -20 293 1 319 153 68 0 chr17 22937045 22937104 -66567449 - AluS SINE Alu -240 63 1 740 233 62 54 chr17 22937110 22937219 -66567334 + L1M4c LINE L1 2101 2208 -4174 2155 117 0 0 chr17 22937219 22937528 -66567025 + AluSg1 SINE Alu 1 309 0 740 233 62 54 chr17 22937528 22937847 -66566706 + L1M4c LINE L1 2208 2533 -3849 288 169 68 0 chr17 22937860 22937919 -66566634 + L1MA9 LINE L1 6250 6312 0 760 256 13 58 chr17 22937933 22938036 -66566517 + L1MA10 LINE L1 6023 6129 -205 2124 106 0 3 chr17 22938036 22938329 -66566224 + AluSc SINE Alu 1 292 -17 222 37 0 0 chr17 22938336 22938363 -66566190 + (CAAAA)n Simple_repeat Simple_repeat 5 31 0 760 256 13 58 chr17 22938363 22938563 -66565990 + L1MA10 LINE L1 6135 6320 -14 1799 225 81 35 chr17 22938573 22939430 -66565123 + L1MCa LINE L1 2316 3203 -3223 1219 71 0 30 chr17 22940277 22940445 -66564108 + L1PB1 LINE L1 5982 6144 -7 25 51 0 0 chr17 22940731 22940770 -66563783 + AT_rich Low_complexity Low_complexity 1 39 0 522 275 52 34 chr17 22942179 22942448 -66562105 + L1MCa LINE L1 4170 4443 -1983 906 206 20 10 chr17 22942464 22942668 -66561885 + L1PB4 LINE L1 4874 5079 -1067 * 2267 178 60 8 chr17 22942655 22943244 -66561309 + L1PB4 LINE L1 5514 6161 0 602 284 54 31 chr17 22944735 22945182 -66559371 - L1M4 LINE L1 -2249 3897 3441 1955 104 30 10 chr17 22945199 22945497 -66559056 - AluSg SINE Alu -3 307 4 865 108 8 8 chr17 22945499 22945628 -66558925 - AluSq/x SINE Alu -183 129 1 379 279 86 43 chr17 22945630 22945845 -66558708 - L1M4 LINE L1 -2721 3425 3221 2284 81 0 0 chr17 22945845 22946140 -66558413 - AluY SINE Alu -16 295 1 379 279 86 43 chr17 22946140 22946368 -66558185 - L1M4 LINE L1 -2925 3221 2963 312 289 139 54 chr17 22948000 22948353 -66556200 - L1M4 LINE L1 -1782 4364 3982 2071 99 3 3 chr17 22948355 22948647 -66555906 - AluSq SINE Alu -10 303 12 1141 63 7 0 chr17 22948647 22948789 -66555764 - AluSp SINE Alu -170 143 1 481 269 77 48 chr17 22948841 22949049 -66555504 - L1M4 LINE L1 -2210 3936 3723 2283 60 7 17 chr17 22949052 22949354 -66555199 - AluY SINE Alu -12 299 1 23 33 0 0 chr17 22949476 22949506 -66555047 + AT_rich Low_complexity Low_complexity 1 30 0 658 290 52 13 chr17 22949897 22950128 -66554425 - MIR SINE MIR -16 246 7 427 273 39 54 chr17 22950134 22950339 -66554214 - L2 LINE L2 -169 3103 2902 494 181 143 0 chr17 22951060 22951165 -66553388 - MER103 DNA DNA -46 120 1 383 318 52 26 chr17 22951745 22951899 -66552654 - L1MC4a LINE L1 -1603 6205 6048 3934 180 66 41 chr17 22951900 22952817 -66551736 - L1MB7 LINE L1 -7 6177 5256 1586 215 36 34 chr17 22953109 22953527 -66551026 - L1MB7 LINE L1 -849 5297 4879 * 4192 227 47 78 chr17 22953525 22953867 -66550686 - L1MB7 LINE L1 -1893 4253 3902 2244 109 0 0 chr17 22953867 22954178 -66550375 - AluY SINE Alu 0 311 1 4192 227 47 78 chr17 22954178 22954547 -66550006 - L1MB7 LINE L1 -2244 3902 3523 2261 99 7 0 chr17 22954547 22954851 -66549702 - AluSp SINE Alu -7 306 1 4192 227 47 78 chr17 22954851 22956004 -66548549 - L1MB7 LINE L1 -2623 3523 2415 2027 119 3 19 chr17 22956004 22956177 -66548376 - AluSq SINE Alu -7 306 139 2206 124 0 0 chr17 22956177 22956476 -66548077 - AluSc SINE Alu -10 299 1 2027 119 3 19 chr17 22956476 22956613 -66547940 - AluSq SINE Alu -174 139 1 4192 227 47 78 chr17 22956613 22956631 -66547922 - L1MB7 LINE L1 -3731 2415 2398 363 145 12 48 chr17 22956614 22956697 -66547856 - L1 LINE L1 -893 5253 5174 * 307 143 0 14 chr17 22957692 22957762 -66546791 - L1PA16 LINE L1 -18 6148 6080 753 233 12 6 chr17 22958303 22958466 -66546087 - FRAM SINE Alu -2 164 1 2281 119 3 0 chr17 22959006 22959308 -66545245 + AluSq SINE Alu 1 303 -10 1452 254 59 61 chr17 22959392 22959458 -66545095 - MER82 DNA MER2_type 0 653 588 1982 95 84 4 chr17 22959458 22959731 -66544822 - AluSp SINE Alu -18 295 1 1452 254 59 61 chr17 22959731 22960120 -66544433 - MER82 DNA MER2_type -65 588 199 215 307 10 30 chr17 22961192 22961293 -66543260 + MER5B DNA MER1_type 63 161 -17 272 342 0 40 chr17 22961465 22961614 -66542939 - MER5B DNA MER1_type -33 145 3 204 40 0 0 chr17 22962629 22962654 -66541899 + (GGA)n Simple_repeat Simple_repeat 1 25 0 184 316 13 13 chr17 22964698 22964777 -66539776 + MIR3 SINE MIR 118 196 -12 3535 83 26 14 chr17 22966721 22967226 -66537327 + MER9 LTR ERVK 1 511 0 2388 81 7 0 chr17 22967982 22968277 -66536276 - AluY SINE Alu -14 297 1 349 311 108 37 chr17 22968715 22969159 -66535394 - L1ME4a LINE L1 -97 6024 5501 2518 62 0 3 chr17 22969159 22969465 -66535088 - AluY SINE Alu -6 305 1 349 311 108 37 chr17 22969465 22969729 -66534824 - L1ME4a LINE L1 -620 5501 5257 1536 211 13 0 chr17 22969766 22970064 -66534489 - AluJb SINE Alu -10 302 1 306 87 0 0 chr17 22970261 22970307 -66534246 + (CA)n Simple_repeat Simple_repeat 1 46 0 2090 108 10 10 chr17 22970727 22971015 -66533538 + AluSx SINE Alu 1 288 -24 26 30 0 0 chr17 22971015 22971048 -66533505 + AT_rich Low_complexity Low_complexity 1 33 0 1022 182 27 23 chr17 22971942 22972162 -66532391 - L1 LINE L1 -2091 4055 3835 3724 146 11 22 chr17 22972166 22973261 -66531292 + L1MA4A LINE L1 4970 6019 -284 1465 208 0 24 chr17 22973316 22973605 -66530948 + AluJo SINE Alu 1 282 -30 327 295 100 16 chr17 22973659 22973849 -66530704 - L1ME LINE L1 -429 5692 5487 3900 227 163 70 chr17 22974152 22974495 -66530058 - HAL1 LINE L1 -109 2398 2088 2223 111 10 0 chr17 22974495 22974793 -66529760 - AluSx SINE Alu -11 301 1 3900 227 163 70 chr17 22974793 22975661 -66528892 - HAL1 LINE L1 -419 2088 1301 2382 103 42 3 chr17 22975661 22976021 -66528532 - L1MB2 LINE L1 -4 6167 5794 3900 227 163 70 chr17 22976021 22976992 -66527561 - HAL1 LINE L1 -1206 1301 14 225 0 0 0 chr17 22977072 22977097 -66527456 + (TG)n Simple_repeat Simple_repeat 2 26 0 249 33 0 0 chr17 22977110 22977140 -66527413 + (CA)n Simple_repeat Simple_repeat 1 30 0 475 311 103 38 chr17 22977483 22977882 -66526671 - L1ME LINE L1 -1940 4206 3782 1771 164 7 32 chr17 22978096 22978406 -66526147 + AluJo SINE Alu 1 302 -10 2678 46 0 0 chr17 22978472 22978777 -66525776 - AluY SINE Alu -6 305 1 328 210 74 0 chr17 22980533 22980614 -66523939 - MIR3 SINE MIR -54 154 68 1301 271 138 24 chr17 22981397 22981478 -66523075 + L1ME2 LINE L1 5491 5561 -603 1920 142 6 22 chr17 22981478 22981795 -66522758 + AluJb SINE Alu 1 312 0 1301 271 138 24 chr17 22981795 22982254 -66522299 + L1ME2 LINE L1 5561 6107 -57 1772 163 10 7 chr17 22982254 22982549 -66522004 + AluJo SINE Alu 1 296 -16 1301 271 138 24 chr17 22982549 22982601 -66521952 + L1ME2 LINE L1 6107 6152 -12 3133 175 56 24 chr17 22983054 22983467 -66521086 + L1MB3 LINE L1 5443 5909 -275 2442 91 7 0 chr17 22983467 22983774 -66520779 + AluSx SINE Alu 1 309 -3 3133 175 56 24 chr17 22983774 22984058 -66520495 + L1MB3 LINE L1 5909 6182 -2 651 205 0 8 chr17 22984147 22984274 -66520279 - AluJb SINE Alu -100 212 87 385 77 10 34 chr17 22984377 22984443 -66520110 + AluSp/q SINE Alu 240 296 -7 1202 202 40 78 chr17 22984592 22984963 -66519590 + MSTD LTR MaLR 1 357 -39 699 224 19 9 chr17 22985058 22985272 -66519281 - L1MC/D LINE L1 -2311 5474 5259 442 187 19 47 chr17 22985325 22985432 -66519121 - L1MC/D LINE L1 -885 5261 5158 25 31 0 0 chr17 22985453 22985485 -66519068 + AT_rich Low_complexity Low_complexity 1 32 0 2701 169 17 117 chr17 22985510 22985684 -66518869 - LTR34 LTR ERV1 -2 697 507 2305 92 3 0 chr17 22985684 22985978 -66518575 + AluSp SINE Alu 1 295 -18 2701 169 17 117 chr17 22985978 22986574 -66517979 - LTR34 LTR ERV1 -192 507 4 325 181 0 83 chr17 22986874 22986946 -66517607 + AluJ/FLAM SINE Alu 1 57 -245 864 162 7 26 chr17 22986988 22987142 -66517411 + AluJb SINE Alu 3 153 -159 2213 117 0 0 chr17 22987270 22987561 -66516992 + AluSg SINE Alu 2 292 -18 304 251 48 36 chr17 22987576 22987743 -66516810 - L1MC4a LINE L1 -1524 6284 6116 285 69 103 0 chr17 22987910 22987997 -66516556 + (TA)n Simple_repeat Simple_repeat 2 97 0 413 279 157 34 chr17 22987998 22988292 -66516261 - L1MC4a LINE L1 -1849 5959 5630 677 138 14 51 chr17 22988788 22988926 -66515627 - FLAM_C SINE Alu 0 133 1 885 165 0 0 chr17 22990150 22990283 -66514270 + AluSq/x SINE Alu 1 133 -180 183 281 288 13 chr17 22990828 22990981 -66513572 + MIR SINE MIR 38 232 -30 2129 135 78 66 chr17 22990995 22991037 -66513516 - MSTA LTR MaLR 0 428 388 2170 137 0 0 chr17 22991037 22991337 -66513216 + AluSx SINE Alu 1 300 -12 2129 135 78 66 chr17 22991337 22991384 -66513169 - MSTA LTR MaLR -40 388 343 2348 93 0 7 chr17 22991384 22991685 -66512868 + AluY SINE Alu 2 300 -11 2129 135 78 66 chr17 22991685 22992017 -66512536 - MSTA LTR MaLR -85 343 1 1441 201 0 19 chr17 22992165 22992433 -66512120 + AluJb SINE Alu 1 263 -49 395 105 0 7 chr17 22992434 22992495 -66512058 - Alu SINE Alu -246 55 3 2082 126 19 13 chr17 22992503 22992813 -66511740 - AluSx SINE Alu 0 312 1 558 67 0 0 chr17 22992882 22992957 -66511596 + (CA)n Simple_repeat Simple_repeat 2 76 0 2519 69 3 0 chr17 22995867 22996170 -66508383 + AluY SINE Alu 1 304 -7 195 69 0 0 chr17 22996784 22996813 -66507740 + (TG)n Simple_repeat Simple_repeat 2 30 0 339 254 15 90 chr17 22996885 22997019 -66507534 + L2 LINE L2 3189 3312 -1 248 261 136 45 chr17 22997214 22997390 -66507163 - LTR67 LTR ERVL -8 549 358 268 253 71 29 chr17 22998007 22998165 -66506388 - L1MC4a LINE L1 -747 5399 5262 698 291 99 60 chr17 22998388 22999422 -66505131 + L1ME LINE L1 829 1938 -4669 1862 246 68 56 chr17 22999424 22999989 -66504564 + L1ME LINE L1 3478 4061 -2365 2265 78 7 0 chr17 22999989 23000300 -66504253 - AluSp SINE Alu 0 313 1 1862 246 68 56 chr17 23000300 23000641 -66503912 + L1ME LINE L1 4061 4396 -2030 643 222 25 84 chr17 23000899 23000970 -66503583 - MIR SINE MIR -3 259 185 2293 108 3 3 chr17 23000970 23001277 -66503276 - AluSx SINE Alu -5 307 1 643 222 25 84 chr17 23001277 23001408 -66503145 - MIR SINE MIR -77 185 69 1109 109 81 97 chr17 23001626 23001741 -66502812 - L1MB1 LINE L1 0 6168 6053 1292 98 57 0 chr17 23001741 23001935 -66502618 - L1PA16 LINE L1 -9 6157 5953 1109 109 81 97 chr17 23001935 23002066 -66502487 - L1MB1 LINE L1 -115 6053 5926 1577 117 53 148 chr17 23002067 23002479 -66502074 + THE1C LTR MaLR 1 373 -2 8846 126 51 8 chr17 23002481 23003833 -66500720 + THE1C-int LTR MaLR 1 1410 -170 3325 138 14 31 chr17 23003859 23004432 -66500121 - L1MB1 LINE L1 -239 5929 5367 674 176 59 17 chr17 23005039 23005158 -66499395 - FLAM_C SINE Alu -9 124 1 204 383 100 0 chr17 23005569 23005689 -66498864 + MIR3 SINE MIR 70 201 -7 729 197 0 44 chr17 23005707 23005844 -66498709 + FLAM_A SINE Alu 2 132 -1 1540 185 119 29 chr17 23005943 23006364 -66498189 + LTR2B LTR ERV1 32 490 0 388 200 67 0 chr17 23006577 23006667 -66497886 + MER45A DNA AcHobo 31 126 -52 183 243 0 0 chr17 23007359 23007396 -66497157 + L2 LINE L2 3190 3226 -87 1859 147 26 16 chr17 23008232 23008539 -66496014 - AluSg SINE Alu 0 310 1 180 0 0 0 chr17 23008835 23008855 -66495698 + (T)n Simple_repeat Simple_repeat 1 20 0 466 104 30 0 chr17 23008867 23008934 -66495619 - AluSp/q SINE Alu -84 229 161 1586 164 73 4 chr17 23009518 23009679 -66494874 - AluJo SINE Alu -13 299 110 306 0 0 0 chr17 23009679 23009713 -66494840 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1586 164 73 4 chr17 23009713 23009825 -66494728 - AluJo SINE Alu -202 110 7 276 353 60 9 chr17 23010460 23010576 -66493977 + MER91A DNA MER1_type 48 169 -27 3016 128 31 26 chr17 23010576 23011154 -66493399 - LTR35 LTR ERV1 0 618 38 2050 131 3 0 chr17 23011439 23011744 -66492809 - AluSx SINE Alu -6 306 1 532 129 0 0 chr17 23012024 23012117 -66492436 - LTR9B LTR ERV1 -84 560 468 1449 298 34 7 chr17 23012117 23012681 -66491872 - L1ME3A LINE L1 -286 5884 5306 335 268 28 0 chr17 23012719 23012861 -66491692 - L1ME3A LINE L1 -814 5332 5187 9559 23 1 206 chr17 23012960 23014639 -66489914 + SVA Other Other 47 1381 -5 318 237 10 0 chr17 23014644 23014741 -66489812 - L1ME3A LINE L1 -966 5180 5083 2265 76 0 41 chr17 23014748 23015063 -66489490 + AluY SINE Alu 1 302 -9 239 250 13 0 chr17 23015065 23015141 -66489412 + L1MB7 LINE L1 6108 6184 0 25 95 0 0 chr17 23015223 23015297 -66489256 + AT_rich Low_complexity Low_complexity 1 74 0 1985 131 0 0 chr17 23015300 23015604 -66488949 + AluSx SINE Alu 1 304 0 685 229 10 42 chr17 23016285 23016477 -66488076 + MER58A DNA MER1_type 30 215 -9 366 62 250 0 chr17 23016494 23016558 -66487995 - MADE1 DNA Mariner 0 80 1 1337 143 113 0 chr17 23016619 23016850 -66487703 + AluJb SINE Alu 1 257 -55 1589 146 20 0 chr17 23017223 23017476 -66487077 - AluJb SINE Alu -52 260 3 690 124 0 0 chr17 23017623 23017728 -66486825 - AluSg/x SINE Alu -3 306 202 318 109 0 0 chr17 23017755 23017810 -66486743 + AluJb SINE Alu 248 302 0 367 332 137 34 chr17 23018668 23018873 -66485680 - MIR SINE MIR -19 243 18 2224 94 0 10 chr17 23019147 23019446 -66485107 + AluSx SINE Alu 1 296 -16 2078 133 0 0 chr17 23019446 23019740 -66484813 + AluSc SINE Alu 1 294 -15 2149 113 0 3 chr17 23019746 23020048 -66484505 + AluSx SINE Alu 1 301 -11 1857 156 0 9 chr17 23020055 23020370 -66484183 + AluJb SINE Alu 1 312 0 270 233 159 91 chr17 23020393 23020569 -66483984 - L2 LINE L2 -240 3073 2886 318 204 11 11 chr17 23020577 23020665 -66483888 + FLAM_A SINE Alu 46 133 0 2209 106 0 13 chr17 23020668 23020803 -66483750 + AluSx SINE Alu 1 136 -176 2080 112 23 3 chr17 23020803 23021108 -66483445 + AluSx SINE Alu 1 311 -1 2209 106 0 13 chr17 23021108 23021283 -66483270 + AluSx SINE Alu 136 307 -5 2420 50 7 3 chr17 23021286 23021587 -66482966 + AluY SINE Alu 1 302 -9 251 266 78 0 chr17 23021886 23021950 -66482603 - MIR SINE MIR -110 152 84 1444 120 0 5 chr17 23022090 23022299 -66482254 - AluY SINE Alu 0 311 104 22 56 0 0 chr17 23022763 23022799 -66481754 + GC_rich Low_complexity Low_complexity 1 36 0 222 310 0 60 chr17 23022951 23023051 -66481502 + MIR SINE MIR 60 153 -109 250 340 19 28 chr17 23023836 23023942 -66480611 - L2 LINE L2 -41 3231 3127 272 295 26 0 chr17 23023960 23024038 -66480515 - MIR SINE MIR -110 152 73 182 250 0 0 chr17 23024370 23024422 -66480131 + L3 LINE CR1 1423 1474 -103 308 261 65 0 chr17 23024959 23025051 -66479502 - MIR3 SINE MIR -49 159 62 346 289 19 10 chr17 23025185 23025289 -66479264 + MIR SINE MIR 17 121 -141 299 272 78 0 chr17 23025680 23025783 -66478770 - L2 LINE L2 -245 3027 2917 371 242 117 25 chr17 23026016 23026185 -66478368 - MIR SINE MIR -63 145 11 364 276 31 0 chr17 23027286 23027384 -66477169 - MIR SINE MIR -122 140 40 1974 108 39 0 chr17 23027974 23028278 -66476275 - AluSx SINE Alu 0 315 1 225 267 47 12 chr17 23029523 23029609 -66474944 - L2 LINE L2 -261 3011 2923 2154 106 0 7 chr17 23031028 23031320 -66473233 - AluSx SINE Alu -22 290 1 2091 100 0 7 chr17 23031327 23031631 -66472922 - AluSp SINE Alu 0 313 19 303 314 0 0 chr17 23034240 23034345 -66470208 + GA-rich Low_complexity Low_complexity 1 105 0 202 229 16 16 chr17 23035112 23035173 -66469380 + (CAGG)n Simple_repeat Simple_repeat 4 64 0 22 70 0 0 chr17 23036195 23036238 -66468315 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr17 23036402 23036431 -66468122 + GC_rich Low_complexity Low_complexity 1 29 0 2353 81 0 7 chr17 23036606 23036914 -66467639 + AluY SINE Alu 1 306 -5 2230 68 4 0 chr17 23037742 23038056 -66466497 + AluY SINE Alu 1 315 0 185 289 218 27 chr17 23040640 23041007 -66463546 + L2 LINE L2 2084 2520 -794 2176 78 7 14 chr17 23042129 23042422 -66462131 - AluSx SINE Alu -21 291 1 401 262 19 10 chr17 23043789 23043892 -66460661 - L2 LINE L2 -1 3271 3168 203 259 0 37 chr17 23044594 23044648 -66459905 - L2 LINE L2 0 3272 3221 221 30 61 0 chr17 23046871 23046904 -66457649 + (CAGG)n Simple_repeat Simple_repeat 4 38 0 2094 125 0 7 chr17 23049186 23049491 -66455062 + AluSg1 SINE Alu 3 305 -4 229 301 64 16 chr17 23049518 23049632 -66454921 - MIR3 SINE MIR -54 154 63 1112 53 0 0 chr17 23050450 23050582 -66453971 - AluY SINE Alu -179 132 1 2099 135 7 0 chr17 23050583 23050886 -66453667 - AluSx SINE Alu -7 305 1 828 113 9 0 chr17 23051680 23051795 -66452758 - FLAM_C SINE Alu -15 118 3 2946 198 99 19 chr17 23052206 23052492 -66452061 + MER21B LTR ERV1 5 267 -596 1964 123 6 44 chr17 23052492 23052810 -66451743 + AluSg SINE Alu 1 306 -4 2946 198 99 19 chr17 23052810 23053307 -66451246 + MER21B LTR ERV1 267 851 -12 2069 91 45 0 chr17 23053417 23053704 -66450849 - AluSp SINE Alu -13 300 1 446 294 106 49 chr17 23054372 23054617 -66449936 + MIR SINE MIR 4 262 0 229 330 46 55 chr17 23054779 23054888 -66449665 - MIR SINE MIR -6 256 149 206 304 20 39 chr17 23055718 23055820 -66448733 + MIR SINE MIR 50 149 -59 34 0 0 22 chr17 23056614 23056646 -66447907 + AT_rich Low_complexity Low_complexity 1 33 -11 2036 132 7 0 chr17 23056646 23056934 -66447619 - AluSx SINE Alu -22 290 1 34 0 0 22 chr17 23056934 23056946 -66447607 + AT_rich Low_complexity Low_complexity 33 44 0 883 185 6 6 chr17 23056946 23057108 -66447445 + AluJb SINE Alu 131 292 -20 1016 90 0 0 chr17 23057114 23057247 -66447306 + AluY SINE Alu 1 133 -178 2320 79 0 0 chr17 23057247 23057539 -66447014 + AluY SINE Alu 1 292 -19 1039 216 112 14 chr17 23057540 23057818 -66446735 - Charlie1b DNA MER1_type -2380 381 61 2247 94 0 0 chr17 23057818 23058105 -66446448 - AluSc SINE Alu -22 287 1 1039 216 112 14 chr17 23058105 23058173 -66446380 - Charlie1b DNA MER1_type -2700 61 1 317 324 117 45 chr17 23059328 23059550 -66445003 - MIR SINE MIR -5 257 20 2212 101 10 3 chr17 23059592 23059899 -66444654 - AluSp SINE Alu -4 309 1 216 246 28 39 chr17 23059902 23059992 -66444561 - MIR SINE MIR -62 146 61 261 202 146 22 chr17 23060157 23060246 -66444307 + MIR SINE MIR 79 178 -84 2269 68 3 7 chr17 23060848 23061140 -66443413 + AluY SINE Alu 1 291 -20 2398 44 3 38 chr17 23061140 23061457 -66443096 + AluY SINE Alu 1 306 -5 1802 122 90 0 chr17 23061484 23061762 -66442791 - AluJb SINE Alu -7 305 3 1963 95 43 23 chr17 23062564 23062869 -66441684 + AluSx SINE Alu 1 311 -1 1567 169 36 11 chr17 23062878 23063156 -66441397 + AluJo SINE Alu 1 285 -27 212 364 74 11 chr17 23063452 23063628 -66440925 - MIR SINE MIR -41 221 35 2819 191 32 49 chr17 23063763 23063846 -66440707 - L1MB5 LINE L1 -184 5990 5907 1655 111 118 11 chr17 23063846 23064117 -66440436 + AluSg1 SINE Alu 1 300 -9 2819 191 32 49 chr17 23064117 23064705 -66439848 - L1MB5 LINE L1 -267 5907 5331 2214 104 3 13 chr17 23064705 23065021 -66439532 - AluSq SINE Alu 0 313 1 2819 191 32 49 chr17 23065021 23065098 -66439455 - L1MB5 LINE L1 -843 5331 5254 226 267 25 83 chr17 23065170 23065290 -66439263 + MIR SINE MIR 27 139 -69 2249 177 63 72 chr17 23066327 23066886 -66437667 + MLT2B3 LTR ERVL 1 554 0 1881 152 7 10 chr17 23067184 23067487 -66437066 + AluSx SINE Alu 1 302 -10 560 165 0 0 chr17 23067498 23067583 -66436970 + AluJ/FLAM SINE Alu 8 92 -220 1166 188 58 0 chr17 23067597 23067820 -66436733 - AluJo SINE Alu -76 236 1 337 243 93 28 chr17 23068758 23068865 -66435688 - MIR SINE MIR -36 226 113 2252 85 0 3 chr17 23069412 23069705 -66434848 + AluSc SINE Alu 1 292 -17 1595 209 36 25 chr17 23069883 23070242 -66434311 + MLT1A1 LTR MaLR 1 363 -2 2046 112 0 7 chr17 23070264 23070571 -66433982 - AluSp SINE Alu 0 305 1 2212 104 0 0 chr17 23070578 23070875 -66433678 - AluSc SINE Alu -12 297 1 191 175 75 0 chr17 23073316 23073356 -66431197 + MIR SINE MIR 93 135 -73 266 319 11 0 chr17 23073411 23073505 -66431048 - MIR SINE MIR -56 152 58 263 278 56 0 chr17 23076601 23076691 -66427862 + MIR3 SINE MIR 61 155 -53 193 297 69 76 chr17 23076738 23076883 -66427670 - L2 LINE L2 -18 3254 3111 234 282 239 8 chr17 23076905 23077022 -66427531 - MIR SINE MIR 0 262 119 802 141 0 8 chr17 23077024 23077152 -66427401 + AluJo/FLAM SINE Alu 5 131 -181 2255 39 13 46 chr17 23077155 23077461 -66427092 + AluY SINE Alu 1 296 -15 1424 172 65 38 chr17 23077593 23077727 -66426826 + AluJo SINE Alu 1 130 -172 2105 84 6 47 chr17 23077727 23078049 -66426504 + AluY SINE Alu 1 309 -2 1424 172 65 38 chr17 23078049 23078204 -66426349 + AluJo SINE Alu 130 298 -4 241 256 61 12 chr17 23079889 23079971 -66424582 + MIR SINE MIR 59 144 -118 237 319 14 0 chr17 23080840 23080909 -66423644 + MIR SINE MIR 62 131 -77 369 253 312 5 chr17 23081144 23081365 -66423188 + L2 LINE L2 2472 2760 -554 824 263 121 26 chr17 23081366 23081712 -66422841 + L2 LINE L2 2913 3291 -22 1840 145 14 17 chr17 23082055 23082351 -66422202 + AluJb SINE Alu 1 295 -17 222 289 0 0 chr17 23082782 23082834 -66421719 + MIR SINE MIR 87 138 -70 244 200 0 0 chr17 23083134 23083179 -66421374 - MIR SINE MIR -62 146 102 198 103 0 0 chr17 23083223 23083252 -66421301 + (CAGGG)n Simple_repeat Simple_repeat 3 31 0 358 243 30 30 chr17 23083436 23083605 -66420948 + (CAGAGA)n Simple_repeat Simple_repeat 2 170 0 186 342 40 0 chr17 23084003 23084079 -66420474 + MIR SINE MIR 90 168 -94 210 340 40 27 chr17 23084084 23084234 -66420319 + L2 LINE L2 2873 3024 -248 398 317 32 0 chr17 23084773 23084896 -66419657 - MIR SINE MIR -19 243 117 194 245 75 0 chr17 23084979 23085032 -66419521 + MIR SINE MIR 16 72 -136 661 164 0 0 chr17 23085059 23085169 -66419384 + AluJb SINE Alu 1 110 -202 1876 94 0 109 chr17 23135748 23135813 -66368740 - L1P4 LINE L1 -586 5579 5509 1861 123 0 14 chr17 23135813 23136098 -66368455 + AluSx SINE Alu 1 281 -31 2674 71 3 38 chr17 23136098 23136336 -66368217 + THE1A LTR MaLR 2 224 -131 2274 83 0 19 chr17 23136336 23136650 -66367903 + AluSg SINE Alu 1 308 -2 2674 71 3 38 chr17 23136650 23136778 -66367775 + THE1A LTR MaLR 224 355 0 1876 94 0 109 chr17 23136778 23137061 -66367492 - L1P4 LINE L1 -654 5511 5268 3764 88 46 12 chr17 23137061 23137628 -66366925 + L1PA11 LINE L1 5588 6173 -1 2774 16 0 0 chr17 23137965 23138283 -66366270 - AluYb8 SINE Alu 0 318 1 1623 175 30 3 chr17 23139318 23139615 -66364938 + AluJo SINE Alu 7 311 -1 250 138 35 17 chr17 23139618 23139676 -66364877 + GA-rich Low_complexity Low_complexity 4 62 0 338 357 54 9 chr17 23141055 23141279 -66363274 - L1MEc LINE L1 -6014 382 149 310 291 22 93 chr17 23141287 23141469 -66363084 + L1MB3 LINE L1 4993 5161 -985 1642 192 0 7 chr17 23141530 23141832 -66362721 + AluJb SINE Alu 1 300 -12 358 224 140 14 chr17 23141839 23141982 -66362571 + L1MB3 LINE L1 5317 5477 -2331 1779 150 0 29 chr17 23142213 23142526 -66362027 - AluJo SINE Alu -8 304 1 378 261 7 29 chr17 23142820 23142958 -66361595 - L1M4 LINE L1 -1447 4699 4565 607 207 44 58 chr17 23144132 23144320 -66360233 - MER6 DNA MER2_type -1 864 -52 356 220 22 44 chr17 23144425 23144516 -66360037 + MIR3 SINE MIR 72 160 -48 986 186 72 0 chr17 23144652 23144846 -66359707 - MER3 DNA MER1_type -1 208 1 589 311 119 4 chr17 23144958 23145193 -66359360 + MIR SINE MIR 1 262 0 292 243 0 0 chr17 23145263 23145341 -66359212 - L1ME LINE L1 -374 5747 5670 226 222 19 0 chr17 23145352 23145406 -66359147 - L1ME LINE L1 -526 5595 5541 302 294 12 0 chr17 23145441 23145526 -66359027 - L1MB3 LINE L1 -268 5915 5830 2402 80 3 0 chr17 23145797 23146109 -66358444 + AluSp SINE Alu 1 313 0 21 0 0 0 chr17 23146580 23146601 -66357952 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr17 23146698 23146719 -66357834 + (GA)n Simple_repeat Simple_repeat 2 22 0 821 228 0 0 chr17 23146719 23146864 -66357689 - FRAM SINE Alu -34 142 1 1492 203 37 23 chr17 23147516 23147865 -66356688 + L1MB3 LINE L1 5830 6183 0 1483 182 3 38 chr17 23148997 23149315 -66355238 + AluJo SINE Alu 1 307 -5 466 355 22 33 chr17 23150190 23150463 -66354090 + L1ME LINE L1 3777 4046 -2100 41 0 0 0 chr17 23150463 23150504 -66354049 + AT_rich Low_complexity Low_complexity 1 41 0 355 314 82 44 chr17 23150526 23150639 -66353914 + L1ME LINE L1 4074 4196 -1950 1719 130 92 3 chr17 23150639 23150923 -66353630 + AluSc SINE Alu 1 309 0 355 314 82 44 chr17 23150923 23150968 -66353585 + L1ME LINE L1 4196 4238 -1908 1280 253 24 24 chr17 23151443 23151822 -66352731 + HAL1 LINE L1 15 393 -2114 2240 233 139 59 chr17 23151846 23151938 -66352615 + HAL1 LINE L1 504 587 -1920 1751 125 68 0 chr17 23151938 23152217 -66352336 - AluSx SINE Alu -14 298 1 2240 233 139 59 chr17 23152217 23152649 -66351904 + HAL1 LINE L1 587 983 -1524 2336 151 8 8 chr17 23152649 23153047 -66351506 + L1MB2 LINE L1 5773 6170 -1 2240 233 139 59 chr17 23153047 23153715 -66350838 + HAL1 LINE L1 983 1793 -714 1024 261 144 35 chr17 23153729 23154334 -66350219 + HAL1 LINE L1 1837 2507 0 282 256 106 39 chr17 23154529 23154709 -66349844 + L1ME LINE L1 5469 5660 -461 1368 176 3 88 chr17 23154782 23155101 -66349452 - AluJo SINE Alu -17 295 4 1793 186 8 32 chr17 23155126 23155502 -66349051 - L1MB5 LINE L1 -6 6168 5802 1162 184 29 21 chr17 23155506 23155745 -66348808 - MER68 LTR ERV1 -25 537 297 1150 92 13 2 chr17 23155746 23155985 -66348568 + AluSp SINE Alu 2 292 -21 1388 170 112 4 chr17 23155985 23156262 -66348291 - MER68 LTR ERV1 -255 307 1 509 206 227 16 chr17 23157719 23157913 -66346640 - MLT1E2 LTR MaLR -255 371 137 581 251 99 22 chr17 23158591 23158814 -66345739 + L2 LINE L2 3019 3258 -55 2360 59 0 3 chr17 23158829 23159117 -66345436 - AluY SINE Alu -24 287 1 4193 167 44 6 chr17 23159183 23160600 -66343953 + L1PA16 LINE L1 4492 5962 -204 2302 96 0 0 chr17 23160668 23160959 -66343594 + AluSx SINE Alu 22 312 0 1193 166 15 0 chr17 23160985 23161184 -66343369 + L1PA16 LINE L1 5962 6163 -3 198 0 0 0 chr17 23161511 23161533 -66343020 + (CA)n Simple_repeat Simple_repeat 1 22 0 1874 50 0 0 chr17 23161895 23162114 -66342439 - L1PA5 LINE L1 -8 6146 5928 464 232 0 0 chr17 23162431 23162530 -66342023 - FRAM SINE Alu -52 124 26 2204 255 45 58 chr17 23162846 23163646 -66340907 + L1ME3A LINE L1 5379 6168 -2 2582 44 0 0 chr17 23163896 23164189 -66340364 - AluY SINE Alu -9 302 10 3435 137 37 54 chr17 23164206 23164835 -66339718 + LTR35 LTR ERV1 1 618 0 418 315 54 7 chr17 23164845 23164994 -66339559 - MER91A DNA MER1_type -40 156 1 1709 185 3 19 chr17 23165608 23165916 -66338637 + AluJo SINE Alu 1 303 -9 501 235 195 0 chr17 23168131 23168280 -66336273 - MER45A DNA AcHobo 0 178 1 644 211 23 23 chr17 23168554 23168687 -66335866 - FLAM_A SINE Alu 0 133 1 275 256 149 14 chr17 23168700 23168841 -66335712 - MIR3 SINE MIR -3 205 43 2490 68 0 0 chr17 23169242 23169538 -66335015 + AluY SINE Alu 1 296 -15 1632 174 10 24 chr17 23169547 23169841 -66334712 + AluJo SINE Alu 1 290 -22 380 103 0 0 chr17 23169931 23169989 -66334564 + L1MB2 LINE L1 6107 6164 -7 264 280 91 38 chr17 23170350 23170482 -66334071 + MIR3 SINE MIR 37 175 -33 523 298 84 0 chr17 23170919 23171097 -66333456 - MIR SINE MIR -21 241 49 378 0 0 0 chr17 23171242 23171284 -66333269 + (CA)n Simple_repeat Simple_repeat 2 43 0 899 144 0 0 chr17 23171453 23171585 -66332968 + FLAM_C SINE Alu 2 133 0 4357 166 23 25 chr17 23172256 23172956 -66331597 + L1MB1 LINE L1 5367 6066 -102 1268 104 74 15 chr17 23172956 23173157 -66331396 + L1PA16 LINE L1 5953 6166 0 4357 166 23 25 chr17 23173157 23173247 -66331306 + L1MB1 LINE L1 6066 6155 -13 706 232 49 22 chr17 23173503 23173688 -66330865 + MIR SINE MIR 70 259 -3 313 239 130 0 chr17 23173693 23173785 -66330768 - L1MC/D LINE L1 -2027 5850 5747 1243 268 83 39 chr17 23173945 23174177 -66330376 - L1MC/D LINE L1 -2030 4185 3965 1956 145 14 7 chr17 23174177 23174474 -66330079 - AluSx SINE Alu -13 299 1 1243 268 83 39 chr17 23174474 23175086 -66329467 - L1MC/D LINE L1 -2250 3965 3267 832 263 90 73 chr17 23175088 23175976 -66328577 - L1MDa LINE L1 -4532 1683 817 2069 129 0 0 chr17 23175977 23176281 -66328272 - AluSg SINE Alu 0 304 1 300 265 173 49 chr17 23176670 23176855 -66327698 + L1ME4a LINE L1 5265 5472 -2336 238 194 194 65 chr17 23177433 23177603 -66326950 + LTR67 LTR ERVL 358 549 -8 409 244 15 89 chr17 23177800 23177935 -66326618 - L2 LINE L2 0 3313 3189 232 298 0 24 chr17 23178005 23178089 -66326464 + L1ME4a LINE L1 5936 6017 -104 30 0 0 0 chr17 23180992 23181022 -66323531 + AT_rich Low_complexity Low_complexity 1 30 0 1916 130 0 39 chr17 23181177 23181484 -66323069 - AluSx SINE Alu -17 295 1 223 154 0 0 chr17 23181831 23181870 -66322683 + (TG)n Simple_repeat Simple_repeat 1 39 0 328 281 274 0 chr17 23182553 23182706 -66321847 - MIR SINE MIR -30 232 38 181 267 17 17 chr17 23183518 23183578 -66320975 + L2 LINE L2 2922 2981 -332 23 33 0 0 chr17 23184578 23184608 -66319945 + AT_rich Low_complexity Low_complexity 1 30 0 465 326 100 27 chr17 23185059 23185202 -66319351 + L1ME4a LINE L1 5258 5389 -732 1922 140 0 69 chr17 23185202 23185537 -66319016 + AluJb SINE Alu 1 312 0 465 326 100 27 chr17 23185537 23186004 -66318549 + L1ME4a LINE L1 5389 5906 -215 1911 145 3 0 chr17 23187377 23187659 -66316894 + AluSq SINE Alu 1 283 -30 2413 92 7 0 chr17 23187808 23188146 -66316407 + AluSq SINE Alu 3 313 0 21 0 0 0 chr17 23188742 23188763 -66315790 + AT_rich Low_complexity Low_complexity 1 21 0 714 183 16 8 chr17 23191759 23191885 -66312668 + FLAM_A SINE Alu 12 138 -4 337 329 0 46 chr17 23194115 23194267 -66310286 + MER5B DNA MER1_type 4 148 -30 219 293 20 30 chr17 23194438 23194537 -66310016 - MER5B DNA MER1_type -17 161 64 592 252 52 0 chr17 23195131 23195266 -66309287 + MER82 DNA MER2_type 2 143 -510 1757 163 0 43 chr17 23195712 23196037 -66308516 - AluJb SINE Alu -1 311 1 1770 251 61 5 chr17 23196046 23196473 -66308080 + MER82 DNA MER2_type 203 653 0 805 182 54 0 chr17 23197076 23197224 -66307329 + FRAM SINE Alu 10 165 -11 2013 69 4 4 chr17 23197538 23197785 -66306768 - AluSq SINE Alu -65 248 2 419 141 0 0 chr17 23198078 23198149 -66306404 + L1PA16 LINE L1 6080 6150 -16 526 272 26 0 chr17 23199379 23199493 -66305060 + L2 LINE L2 3197 3313 0 17569 152 75 11 chr17 23199568 23201731 -66302822 + L1MA3 LINE L1 16 2429 -5136 2429 71 3 0 chr17 23201731 23202025 -66302528 - AluSg SINE Alu -15 295 1 17569 152 75 11 chr17 23202025 23202896 -66301657 + L1MA3 LINE L1 2429 3243 -4322 13770 155 28 25 chr17 23202875 23203074 -66301479 + L1MA3 LINE L1 3980 4177 -3547 * 2152 109 3 3 chr17 23203074 23203367 -66301186 - AluSx SINE Alu -19 293 1 13770 155 28 25 chr17 23203367 23206776 -66297777 + L1MA3 LINE L1 4177 7724 0 210 258 45 0 chr17 23206778 23206844 -66297709 + GA-rich Low_complexity Low_complexity 5 73 0 262 331 68 8 chr17 23206861 23206994 -66297559 - MER112 DNA MER1_type -118 142 2 332 251 217 49 chr17 23207008 23207211 -66297342 + MIR SINE MIR 15 251 -11 1290 185 66 28 chr17 23207364 23207651 -66296902 - AluJo SINE Alu -14 298 1 705 122 75 0 chr17 23208412 23208519 -66296034 - FLAM_A SINE Alu -7 135 21 493 171 28 185 chr17 23208920 23209131 -66295422 + LTR34 LTR ERV1 1 178 -521 2143 112 7 7 chr17 23210611 23210915 -66293638 + AluSx SINE Alu 1 304 -8 793 189 5 32 chr17 23211049 23211234 -66293319 + L1MB7 LINE L1 5103 5282 -864 1087 199 92 8 chr17 23211285 23211536 -66293017 + L1MB7 LINE L1 5913 6184 0 1653 158 40 30 chr17 23212026 23212329 -66292224 + AluJo SINE Alu 3 308 -4 29 60 0 0 chr17 23212536 23212586 -66291967 + AT_rich Low_complexity Low_complexity 1 50 0 183 283 0 50 chr17 23212624 23212684 -66291869 - L2 LINE L2 0 3272 3216 2025 125 107 24 chr17 23212747 23213083 -66291470 + THE1B LTR MaLR 1 364 0 369 189 11 33 chr17 23214762 23214852 -66289701 + MLT1L LTR MaLR 27 114 -501 970 159 13 6 chr17 23216452 23216609 -66287944 + FRAM SINE Alu 1 156 -20 280 314 44 15 chr17 23216637 23216774 -66287779 + L1M4 LINE L1 3983 4123 -2023 333 275 140 31 chr17 23217389 23217582 -66286971 + L1ME4a LINE L1 3001 3214 -2932 489 231 96 13 chr17 23217669 23217825 -66286728 + L1ME4a LINE L1 5952 6120 -1 753 278 130 44 chr17 23218540 23219062 -66285491 + L1ME4a LINE L1 5472 6038 -83 230 162 0 0 chr17 23219064 23219101 -66285452 + MLT1L LTR MaLR 576 612 -3 278 241 9 102 chr17 23219101 23219209 -66285344 + L2 LINE L2 2987 3084 -188 322 284 27 47 chr17 23221251 23221399 -66283154 + MLT1L LTR MaLR 114 258 -357 440 339 38 11 chr17 23221490 23221673 -66282880 + MLT1L LTR MaLR 426 613 -2 184 245 57 19 chr17 23222005 23222058 -66282495 + MER5B DNA MER1_type 69 123 -55 1665 136 24 0 chr17 23222594 23222845 -66281708 - Tigger2 DNA MER2_type -1 2717 2461 4029 161 59 16 chr17 23222876 23223620 -66280933 - Tigger2 DNA MER2_type -1940 778 3 2038 104 6 67 chr17 23223912 23224240 -66280313 - AluSq SINE Alu -5 308 1 1479 143 56 28 chr17 23225270 23225365 -66279188 + L1M2 LINE L1 5369 5460 -831 1925 88 0 15 chr17 23225365 23225627 -66278926 + AluSc SINE Alu 38 295 -14 1479 143 56 28 chr17 23225627 23225757 -66278796 + L1M2 LINE L1 5460 5585 -706 1587 137 0 36 chr17 23225757 23226035 -66278518 + AluJo SINE Alu 44 311 -1 2263 120 0 0 chr17 23226038 23226338 -66278215 + AluSx SINE Alu 7 306 -6 1479 143 56 28 chr17 23226338 23226394 -66278159 + L1M2 LINE L1 5586 5663 -628 1009 240 156 6 chr17 23226379 23226700 -66277853 + HAL1 LINE L1 1527 1895 -612 * 3506 128 26 1 chr17 23226716 23227311 -66277242 + MER41A-int LTR ERV1 226 1481 -5263 * 4478 143 112 16 chr17 23227278 23228226 -66276327 + MER41A-int LTR ERV1 909 2017 -3929 317 96 58 0 chr17 23228202 23228254 -66276299 + MER41A-int LTR ERV1 2167 2221 -3725 * 5263 135 63 55 chr17 23228250 23229659 -66274894 + MER41A-int LTR ERV1 3355 4874 -2942 1419 126 0 5 chr17 23229659 23229858 -66274695 + AluSg/x SINE Alu 100 297 -15 12613 100 32 10 chr17 23229862 23230615 -66273938 + MER41A-int LTR ERV1 2434 3170 -2776 2306 90 7 3 chr17 23230615 23230916 -66273637 + AluSc SINE Alu 1 302 -7 12613 100 32 10 chr17 23230916 23232002 -66272551 + MER41A-int LTR ERV1 3170 5944 -2 4577 73 15 0 chr17 23232002 23232548 -66272005 + MER41A LTR ERV1 1 554 0 765 211 13 52 chr17 23233018 23233144 -66271409 + L1MC1 LINE L1 5181 5295 -851 1659 156 3 117 chr17 23233144 23233478 -66271075 + AluJb SINE Alu 1 296 -6 765 211 13 52 chr17 23233478 23233583 -66270970 + L1MC1 LINE L1 5295 5403 -743 * 2018 80 0 16 chr17 23233582 23233924 -66270629 + L1PA7 LINE L1 5573 6154 0 3113 126 69 74 chr17 23233927 23234561 -66269992 + L1MC1 LINE L1 5386 6016 -317 560 131 12 0 chr17 23234613 23234697 -66269856 + FLAM SINE Alu 41 125 -18 1078 176 126 21 chr17 23234699 23234937 -66269616 + L1MC1 LINE L1 6066 6328 -5 258 224 37 127 chr17 23234962 23235096 -66269457 + HAL1 LINE L1 2378 2499 -8 327 199 96 83 chr17 23236663 23236819 -66267734 - MIR SINE MIR -21 241 84 2225 88 3 59 chr17 23236842 23237162 -66267391 + AluSx SINE Alu 1 302 -10 1119 273 71 47 chr17 23237188 23237694 -66266859 - L3 LINE CR1 -1 1576 1059 562 284 118 30 chr17 23237703 23238076 -66266477 - MLT1K LTR MaLR -6 582 177 1236 132 96 23 chr17 23238213 23238433 -66266120 + MER46A DNA MER2_type 1 236 0 1638 170 0 37 chr17 23238545 23238839 -66265714 + AluJb SINE Alu 1 283 -29 842 169 22 0 chr17 23238909 23239045 -66265508 + Tigger1 DNA MER2_type 1 139 -2279 * 1142 144 104 15 chr17 23239041 23239242 -66265311 + Tigger1 DNA MER2_type 2200 2418 0 2319 109 0 0 chr17 23239281 23239592 -66264961 + AluSx SINE Alu 1 311 -1 364 270 45 0 chr17 23239773 23239884 -66264669 - MLT1G LTR MaLR -12 543 428 691 265 137 13 chr17 23239924 23240255 -66264298 - MLT1G LTR MaLR -241 354 5 23 54 0 0 chr17 23240640 23240677 -66263876 + AT_rich Low_complexity Low_complexity 1 37 0 663 247 132 11 chr17 23240717 23240907 -66263646 - MIR SINE MIR -42 220 8 2162 105 0 35 chr17 23241215 23241528 -66263025 - AluSx SINE Alu -8 304 3 387 285 112 39 chr17 23241531 23241570 -66262983 - L1ME4a LINE L1 -296 5825 5790 1871 172 20 35 chr17 23241570 23241918 -66262635 - MER2 DNA MER2_type -1 343 1 387 285 112 39 chr17 23241918 23242307 -66262246 - L1ME4a LINE L1 -331 5790 5365 529 207 147 7 chr17 23242438 23242588 -66261965 + MLT1J LTR MaLR 5 175 -336 1672 203 0 9 chr17 23243003 23243318 -66261235 + AluJb SINE Alu 1 312 0 327 280 125 16 chr17 23244042 23244353 -66260200 - L1ME4a LINE L1 -2922 3224 2880 303 244 24 49 chr17 23244653 23244735 -66259818 + MER102a DNA MER1_type 1 80 -250 254 233 8 142 chr17 23244741 23244861 -66259692 + MER102a DNA MER1_type 221 324 -6 900 295 58 66 chr17 23245848 23246363 -66258190 + LTR67 LTR ERVL 45 555 -2 230 296 90 37 chr17 23246559 23246748 -66257805 - HAL1 LINE L1 -1154 1353 1155 1047 149 0 23 chr17 23247233 23247407 -66257146 + AluJb SINE Alu 136 305 -7 2344 91 0 3 chr17 23247410 23247717 -66256836 + AluSg SINE Alu 1 306 -4 644 262 151 0 chr17 23247732 23248056 -66256497 + L1ME4a LINE L1 5748 6120 -1 380 355 73 17 chr17 23248167 23248401 -66256152 + L2 LINE L2 2844 3090 -182 2194 178 101 13 chr17 23248488 23248944 -66255609 + MLT1D LTR MaLR 10 505 0 255 290 114 8 chr17 23249219 23249350 -66255203 - MIR SINE MIR -86 176 32 247 134 60 75 chr17 23249931 23249998 -66254555 + L1MEd LINE L1 1081 1146 -4973 457 264 77 5 chr17 23250823 23251031 -66253522 + LTR16A LTR ERVL 214 436 -14 34 0 0 0 chr17 23251079 23251113 -66253440 + AT_rich Low_complexity Low_complexity 1 34 0 1986 140 13 0 chr17 23251190 23251490 -66253063 + AluSq SINE Alu 1 304 -9 221 186 23 0 chr17 23252952 23252995 -66251558 - L2 LINE L2 -262 3051 3008 258 279 70 31 chr17 23253004 23253133 -66251420 + MER94 DNA DNA 1 134 0 221 250 31 52 chr17 23253154 23253250 -66251303 - L2 LINE L2 -335 2978 2885 1351 160 0 9 chr17 23253649 23253862 -66250691 + AluJo SINE Alu 81 291 -21 762 181 0 0 chr17 23255616 23255743 -66248810 + FLAM_C SINE Alu 1 127 -6 192 333 9 29 chr17 23255750 23255855 -66248698 - MIR3 SINE MIR -1 207 105 1802 142 15 4 chr17 23455990 23456258 -66048295 - AluSx SINE Alu -39 273 3 2150 155 23 51 chr17 23456273 23456550 -66048003 + LOR1b LTR ERV1 41 303 -158 1962 131 4 0 chr17 23456550 23456825 -66047728 - AluSq SINE Alu -15 298 23 2150 155 23 51 chr17 23456825 23456980 -66047573 + LOR1b LTR ERV1 303 461 0 461 252 17 8 chr17 23456982 23457101 -66047452 - MLT1G1 LTR MaLR -74 521 402 1927 155 17 0 chr17 23457221 23457518 -66047035 - AluJb SINE Alu -10 302 1 1001 107 0 21 chr17 23457518 23457658 -66046895 - AluSq/x SINE Alu -175 137 1 1883 139 0 58 chr17 23457680 23458010 -66046543 - AluJb SINE Alu -1 311 1 404 267 78 0 chr17 23458018 23458134 -66046419 + L1ME3A LINE L1 6041 6165 -5 713 115 0 0 chr17 23458142 23458238 -66046315 + AluSq/x SINE Alu 40 135 -178 299 299 13 0 chr17 23458462 23458539 -66046014 - L2 LINE L2 -33 3239 3162 658 218 97 28 chr17 23458546 23458781 -66045772 + MLT1F1 LTR MaLR 208 503 -64 207 0 0 0 chr17 23458781 23458804 -66045749 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 658 218 97 28 chr17 23458804 23458873 -66045680 + MLT1F1 LTR MaLR 503 566 -1 427 253 99 39 chr17 23458939 23459027 -66045526 - MIR SINE MIR -6 256 175 2407 94 0 0 chr17 23459027 23459324 -66045229 + AluY SINE Alu 1 297 -14 427 253 99 39 chr17 23459324 23459417 -66045136 - MIR SINE MIR -87 175 64 1971 154 29 61 chr17 23459530 23459907 -66044646 - MLT1A1 LTR MaLR 0 365 1 1075 191 86 120 chr17 23460042 23460378 -66044175 + MLT1G LTR MaLR 3 313 -277 1903 85 4 0 chr17 23460500 23460736 -66043817 + AluSq SINE Alu 66 302 -11 475 219 25 34 chr17 23460736 23460855 -66043698 + L1ME1 LINE L1 6047 6164 -2 1926 151 0 46 chr17 23460856 23461181 -66043372 + AluJo SINE Alu 2 311 -1 1129 230 29 89 chr17 23461614 23462125 -66042428 - MLT1G3 LTR MaLR 0 595 5 2131 119 0 7 chr17 23462251 23462545 -66042008 - AluSx SINE Alu -20 292 1 906 256 120 3 chr17 23462891 23463199 -66041354 + LTR16C LTR ERVL 146 489 -2 2129 136 118 20 chr17 23463284 23463674 -66040879 - MSTA LTR MaLR 0 428 1 647 283 97 90 chr17 23463747 23464182 -66040371 + L2 LINE L2 2812 3249 -23 1674 64 0 86 chr17 23464263 23464496 -66040057 + AluSq SINE Alu 18 230 -83 684 160 84 0 chr17 23464597 23464728 -66039825 + MSTA LTR MaLR 286 427 -1 235 246 18 0 chr17 23464754 23464811 -66039742 - MLT1G1 LTR MaLR -537 58 1 1277 254 150 13 chr17 23464844 23465297 -66039256 + LTR33A LTR ERVL 9 523 0 2263 204 107 6 chr17 23465613 23466099 -66038454 + MLT1F LTR MaLR 1 535 -7 22 0 0 0 chr17 23466242 23466264 -66038289 + AT_rich Low_complexity Low_complexity 1 22 0 934 153 0 0 chr17 23466361 23466492 -66038061 + FLAM_A SINE Alu 1 131 -2 462 274 44 38 chr17 23466954 23467327 -66037226 + L1ME LINE L1 5255 5668 -453 256 186 382 0 chr17 23467344 23467446 -66037107 - L2 LINE L2 -3 3310 3170 806 176 138 0 chr17 23467646 23467805 -66036748 + REP3 LTR ERV 3 183 -379 1935 155 10 52 chr17 23467811 23468211 -66036342 - MLT1B LTR MaLR -6 384 2 1660 199 25 53 chr17 23468211 23468486 -66036067 + REP3 LTR ERV 178 440 -122 2296 123 0 0 chr17 23468486 23468795 -66035758 - AluSx SINE Alu -3 309 1 1660 199 25 53 chr17 23468795 23468915 -66035638 + REP3 LTR ERV 440 562 0 1707 111 0 0 chr17 23469568 23469793 -66034760 - AluY SINE Alu -86 225 1 257 340 64 43 chr17 23469853 23469994 -66034559 + L2 LINE L2 3098 3241 -31 2420 149 55 73 chr17 23470001 23470255 -66034298 + L1MC2 LINE L1 5782 6039 -305 2115 100 7 4 chr17 23470255 23470563 -66033990 - AluSc SINE Alu 0 309 1 2420 149 55 73 chr17 23470563 23470870 -66033683 + L1MC2 LINE L1 6039 6334 -10 207 0 0 0 chr17 23470896 23470919 -66033634 + (TG)n Simple_repeat Simple_repeat 2 24 0 264 30 0 0 chr17 23470935 23470968 -66033585 + (GA)n Simple_repeat Simple_repeat 2 34 0 1204 189 19 5 chr17 23471098 23471310 -66033243 + AluJb SINE Alu 86 300 -12 2241 105 0 0 chr17 23471680 23471966 -66032587 + AluSx SINE Alu 11 296 -16 354 246 123 23 chr17 23472503 23472633 -66031920 + L3b LINE CR1 1150 1292 -291 960 246 69 58 chr17 23472636 23473084 -66031469 - LTR16A1 LTR ERVL 0 457 5 895 231 10 26 chr17 23473414 23473609 -66030944 - MIR SINE MIR -35 227 36 217 278 0 19 chr17 23473732 23473786 -66030767 - MER5A DNA MER1_type -6 183 131 430 189 31 49 chr17 23473827 23473944 -66030609 + MIR SINE MIR 34 148 -61 748 133 0 0 chr17 23473946 23474051 -66030502 + FLAM_C SINE Alu 3 107 -36 1404 87 0 0 chr17 23474152 23474325 -66030228 - AluSc SINE Alu -136 173 1 4655 247 90 53 chr17 23474373 23474488 -66030065 - HAL1 LINE L1 -520 1987 1878 2065 97 55 17 chr17 23474488 23474778 -66029775 - AluSx SINE Alu -11 301 1 4655 247 90 53 chr17 23474778 23475225 -66029328 - HAL1 LINE L1 -629 1878 1449 1700 194 0 14 chr17 23475225 23475519 -66029034 - AluJo SINE Alu -22 290 1 4655 247 90 53 chr17 23475519 23475698 -66028855 - HAL1 LINE L1 -1058 1449 1278 1966 167 0 0 chr17 23475698 23475997 -66028556 - AluJb SINE Alu -13 299 1 4655 247 90 53 chr17 23475997 23476235 -66028318 - HAL1 LINE L1 -1229 1278 1050 297 0 0 0 chr17 23476235 23476268 -66028285 + (TG)n Simple_repeat Simple_repeat 1 33 0 4655 247 90 53 chr17 23476268 23476479 -66028074 - HAL1 LINE L1 -1457 1050 848 963 228 0 0 chr17 23476479 23476668 -66027885 + MER5A DNA MER1_type 1 189 0 4655 247 90 53 chr17 23476668 23477302 -66027251 - HAL1 LINE L1 -1659 848 82 2253 78 0 7 chr17 23477302 23477596 -66026957 + AluY SINE Alu 1 292 -19 4655 247 90 53 chr17 23477596 23477678 -66026875 - HAL1 LINE L1 -2425 82 5 2344 59 0 74 chr17 23478079 23478403 -66026150 + AluY SINE Alu 1 300 -11 986 141 4 137 chr17 23481301 23481423 -66023130 + MLT1B LTR MaLR 1 138 -252 2304 103 0 3 chr17 23481423 23481723 -66022830 + AluSq SINE Alu 1 299 -14 986 141 4 137 chr17 23481723 23481845 -66022708 + MLT1B LTR MaLR 138 210 -180 2257 108 26 0 chr17 23481845 23482150 -66022403 + AluSq SINE Alu 1 313 0 986 141 4 137 chr17 23482150 23482167 -66022386 + MLT1B LTR MaLR 210 228 -162 296 71 0 0 chr17 23482151 23482193 -66022360 - MADE1 DNA Mariner -37 43 2 * 1948 150 3 23 chr17 23482474 23482781 -66021772 + AluJb SINE Alu 5 305 -7 563 223 23 46 chr17 23482922 23483097 -66021456 - MLT2E LTR ERVL 0 628 458 1107 246 46 4 chr17 23483161 23483442 -66021111 - MLT2E LTR ERVL -326 302 10 231 125 0 0 chr17 23483725 23483757 -66020796 + MLT1G1 LTR MaLR 1 32 -563 904 179 55 55 chr17 23483757 23483975 -66020578 + MLT1B LTR MaLR 1 218 -172 1553 136 0 30 chr17 23484144 23484379 -66020174 - AluSx SINE Alu -84 228 1 2219 107 0 0 chr17 23484462 23484767 -66019786 - AluSc SINE Alu 0 305 1 1255 103 11 27 chr17 23484770 23484955 -66019598 - AluSg/x SINE Alu -11 301 120 1707 164 66 0 chr17 23484993 23485279 -66019274 - AluJb SINE Alu -7 305 1 2003 157 0 3 chr17 23485541 23485841 -66018712 + AluJo SINE Alu 1 299 -13 1074 145 30 15 chr17 23485842 23486042 -66018511 - L1MB5 LINE L1 -10 6164 5962 2633 160 28 2 chr17 23486061 23486531 -66018022 - L1MB3 LINE L1 -2 6181 5700 2638 50 0 0 chr17 23486704 23487004 -66017549 - AluY SINE Alu -11 300 1 2172 114 14 0 chr17 23487006 23487303 -66017250 - AluSx SINE Alu -11 301 1 826 157 0 8 chr17 23487418 23487552 -66017001 - FLAM_A SINE Alu 0 133 1 401 134 15 0 chr17 23488710 23488777 -66015776 - MLT1H1 LTR MaLR 0 555 488 279 79 0 0 chr17 23488811 23488849 -66015704 + (T)n Simple_repeat Simple_repeat 1 38 0 225 162 0 0 chr17 23488949 23488986 -66015567 - Alu SINE Alu -265 37 1 241 296 83 9 chr17 23488991 23489099 -66015454 - Charlie8 DNA MER1_type -2301 116 1 783 169 8 0 chr17 23489135 23489265 -66015288 - FLAM_C SINE Alu 0 133 3 2244 124 3 3 chr17 23489349 23489655 -66014898 - AluSx SINE Alu -6 306 1 1615 145 46 86 chr17 23489888 23490213 -66014340 - AluJo SINE Alu 0 312 1 1826 163 0 67 chr17 23490219 23490415 -66014138 - AluJb SINE Alu 0 312 145 2369 106 6 3 chr17 23490415 23490726 -66013827 - AluSx SINE Alu 0 312 1 1826 163 0 67 chr17 23490726 23490860 -66013693 - AluJb SINE Alu -167 145 4 355 248 26 60 chr17 23491508 23491625 -66012928 - MIR SINE MIR -1 261 149 499 289 113 4 chr17 23492047 23492286 -66012267 - L1ME4a LINE L1 0 6121 5857 1539 185 30 27 chr17 23492330 23492627 -66011926 + AluJo SINE Alu 1 298 -14 291 54 0 0 chr17 23492955 23492992 -66011561 + (TG)n Simple_repeat Simple_repeat 2 38 0 2558 64 0 13 chr17 23493371 23493684 -66010869 + AluY SINE Alu 1 309 -2 336 203 54 0 chr17 23493771 23493845 -66010708 + MIR SINE MIR 41 118 -90 208 293 35 0 chr17 23493862 23493920 -66010633 + L2 LINE L2 3201 3260 -12 464 186 20 20 chr17 23494091 23494193 -66010360 - U13 snRNA snRNA -2 102 1 235 294 0 0 chr17 23494974 23495025 -66009528 - MIR3 SINE MIR -8 200 150 261 255 105 6 chr17 23495190 23495331 -66009222 + MIR3 SINE MIR 54 176 -32 * 1071 215 33 16 chr17 23495269 23495511 -66009042 - MIR SINE MIR -15 247 2 249 175 0 53 chr17 23495511 23495557 -66008996 + L3 LINE CR1 1509 1551 -26 723 176 25 35 chr17 23496651 23496850 -66007703 + LTR37B LTR ERV1 272 468 0 484 207 240 40 chr17 23497246 23497396 -66007157 - MER5A DNA MER1_type -1 188 9 510 258 11 59 chr17 23497545 23497731 -66006822 - MIR SINE MIR -6 256 80 4016 85 3 38 chr17 23498022 23498497 -66006056 - MER41A LTR ERV1 0 554 101 2692 48 0 0 chr17 23498497 23498806 -66005747 + AluY SINE Alu 1 309 -2 4016 85 3 38 chr17 23498806 23498904 -66005649 - MER41A LTR ERV1 -453 101 1 360 257 71 64 chr17 23499950 23500090 -66004463 + MIR3 SINE MIR 6 146 -62 511 47 0 0 chr17 23500611 23500675 -66003878 - MLT1A1 LTR MaLR -28 337 274 743 32 11 0 chr17 23500989 23501083 -66003470 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 946 262 58 92 chr17 23501083 23501435 -66003118 + L2 LINE L2 2690 3052 -261 2519 76 0 0 chr17 23501435 23501739 -66002814 - AluY SINE Alu -7 304 1 946 262 58 92 chr17 23501739 23501750 -66002803 + L2 LINE L2 3052 3062 -251 2300 95 0 0 chr17 23501750 23502058 -66002495 - AluSx SINE Alu 0 308 1 946 262 58 92 chr17 23502058 23502344 -66002209 + L2 LINE L2 3062 3312 -1 528 285 145 1 chr17 23503716 23503902 -66000651 - MIR SINE MIR -10 252 42 180 250 9 121 chr17 23503976 23504092 -66000461 + MIR SINE MIR 109 211 -51 263 250 67 0 chr17 23504339 23504399 -66000154 - MER91C DNA MER1_type -38 102 39 24 0 0 0 chr17 23504643 23504667 -65999886 + GC_rich Low_complexity Low_complexity 1 24 0 234 314 85 8 chr17 23505911 23506029 -65998524 + MIR SINE MIR 96 222 -40 642 210 80 84 chr17 23506115 23506187 -65998366 - MLT1J LTR MaLR -3 508 437 271 0 0 0 chr17 23506187 23506217 -65998336 + (TTTTG)n Simple_repeat Simple_repeat 2 85 0 2228 88 0 34 chr17 23506217 23506512 -65998041 - AluSx SINE Alu -1 314 1 642 210 80 84 chr17 23506512 23506724 -65997829 - MLT1J LTR MaLR -72 439 224 1069 276 97 66 chr17 23507267 23507506 -65997047 + MER115 DNA AcHobo 20 250 -443 1773 189 25 11 chr17 23507506 23507865 -65996688 - MLT1A1 LTR MaLR 0 365 2 1069 276 97 66 chr17 23507865 23508213 -65996340 + MER115 DNA AcHobo 250 625 -68 296 175 10 134 chr17 23508352 23508374 -65996179 + Zaphod DNA AcHobo 3947 3970 -61 2296 97 3 7 chr17 23508374 23508674 -65995879 + AluSq SINE Alu 1 299 -14 296 175 10 134 chr17 23508674 23508748 -65995805 + Zaphod DNA AcHobo 3970 4031 0 2586 59 7 0 chr17 23508978 23509282 -65995271 + AluY SINE Alu 1 306 -5 1521 114 0 18 chr17 23509820 23510039 -65994514 - AluSg/x SINE Alu -15 297 83 2249 171 7 23 chr17 23510140 23510567 -65993986 + MLT1F LTR MaLR 100 519 -23 2068 195 39 17 chr17 23510566 23511027 -65993526 + MER110 LTR ERV1 21 491 0 * 2365 67 0 3 chr17 23511066 23511372 -65993181 - AluY SINE Alu 0 305 1 1396 186 84 7 chr17 23511374 23511649 -65992904 - AluJo SINE Alu -16 296 1 616 106 0 0 chr17 23511677 23511762 -65992791 - AluJ/FLAM SINE Alu -226 86 2 1015 157 56 0 chr17 23511811 23511989 -65992564 - MER3 DNA MER1_type -21 188 1 2378 85 0 0 chr17 23513698 23513991 -65990562 - AluSg SINE Alu -17 293 1 427 217 83 33 chr17 23514048 23514168 -65990385 - MER5B DNA MER1_type -48 130 5 911 119 0 8 chr17 23514244 23514378 -65990175 - FLAM_C SINE Alu 0 133 1 419 257 9 9 chr17 23514401 23514506 -65990047 + MIR SINE MIR 47 151 -111 921 176 43 32 chr17 23514517 23514704 -65989849 - MER5A DNA MER1_type 0 189 1 2129 110 40 20 chr17 23515261 23515561 -65988992 - AluSx SINE Alu -6 306 1 882 141 115 45 chr17 23515718 23515874 -65988679 + AluJb SINE Alu 9 175 -137 364 262 27 47 chr17 23516320 23516469 -65988084 + L2 LINE L2 3131 3276 -37 524 136 0 10 chr17 23516478 23516581 -65987972 + (TGGA)n Simple_repeat Simple_repeat 4 105 0 1587 201 44 34 chr17 23516634 23516818 -65987735 - Charlie1 DNA MER1_type 0 2761 2580 1911 182 115 43 chr17 23516818 23517324 -65987229 + MLT1F LTR MaLR 1 542 0 1587 201 44 34 chr17 23517324 23517615 -65986938 - Charlie1 DNA MER1_type -181 2580 1 2326 81 0 71 chr17 23519737 23519924 -65984629 - AluSx SINE Alu -12 300 144 2033 107 29 0 chr17 23519924 23520196 -65984357 - AluSx SINE Alu -32 280 1 2326 81 0 71 chr17 23520196 23520331 -65984222 - AluSx SINE Alu -168 144 1 2562 66 0 0 chr17 23520719 23521024 -65983529 + AluY SINE Alu 1 305 -6 299 274 166 17 chr17 23521097 23521272 -65983281 - LTR67 LTR ERVL -5 552 352 360 0 0 0 chr17 23521433 23521473 -65983080 + (CA)n Simple_repeat Simple_repeat 2 41 0 423 284 164 0 chr17 23521655 23521771 -65982782 - MIR SINE MIR -120 142 8 205 272 114 26 chr17 23521903 23522017 -65982536 - MIR3 SINE MIR -82 126 3 809 266 78 78 chr17 23522134 23522648 -65981905 + LTR67 LTR ERVL 44 557 0 307 263 12 12 chr17 23523948 23524028 -65980525 + MIR SINE MIR 20 99 -163 228 164 0 110 chr17 23524064 23524137 -65980416 + MLT1G1 LTR MaLR 98 162 -387 665 194 185 58 chr17 23524187 23524517 -65980036 + MLT1G1 LTR MaLR 224 595 0 211 293 158 0 chr17 23524523 23524605 -65979948 + MIR SINE MIR 106 200 -62 531 301 82 6 chr17 23524899 23525082 -65979471 + MIR SINE MIR 49 245 -17 469 263 144 16 chr17 23525248 23525441 -65979112 + LTR16A LTR ERVL 25 242 -208 2273 164 62 31 chr17 23525441 23525923 -65978630 + MLT1D LTR MaLR 1 497 -8 652 188 122 35 chr17 23525937 23526134 -65978419 + LTR16A LTR ERVL 237 450 0 321 218 0 13 chr17 23526163 23526241 -65978312 - L1MC5 LINE L1 -46 7915 7839 2465 74 0 13 chr17 23526274 23526585 -65977968 - AluSp SINE Alu -6 307 1 393 320 7 20 chr17 23526995 23527145 -65977408 - MIR SINE MIR -34 228 81 1422 233 63 20 chr17 23527150 23527592 -65976961 - MLT1C LTR MaLR -1 466 6 1252 246 13 7 chr17 23527700 23528001 -65976552 + MLT1G LTR MaLR 1 303 -287 1264 107 17 6 chr17 23528004 23528182 -65976371 - AluSg/x SINE Alu -2 308 129 1124 175 106 22 chr17 23528187 23528461 -65976092 + MLT1G LTR MaLR 294 590 0 182 33 67 0 chr17 23528550 23528580 -65975973 + A-rich Low_complexity Low_complexity 3 34 0 453 215 74 54 chr17 23529504 23529829 -65974724 - MER34 LTR ERV1 0 542 265 943 174 56 0 chr17 23529862 23530040 -65974513 - MER34C LTR ERV1 -397 188 1 963 295 63 25 chr17 23530957 23531042 -65973511 - LTR16C LTR ERVL -79 412 332 2500 131 13 8 chr17 23531042 23531430 -65973123 + MLT1B LTR MaLR 1 390 0 963 295 63 25 chr17 23531430 23531741 -65972812 - LTR16C LTR ERVL -159 332 1 311 250 169 0 chr17 23532123 23532247 -65972306 - LTR67 LTR ERVL -4 553 409 864 208 147 94 chr17 23532751 23533093 -65971460 - MLT1G LTR MaLR -8 582 198 2360 91 0 0 chr17 23533093 23533408 -65971145 + AluSq SINE Alu 1 315 0 864 208 147 94 chr17 23533408 23533617 -65970936 - MLT1G LTR MaLR -392 198 1 954 96 0 15 chr17 23533626 23533762 -65970791 + FLAM_C SINE Alu 9 142 -1 435 266 73 51 chr17 23534891 23535033 -65969520 - MIR SINE MIR -21 241 93 2492 139 56 15 chr17 23535033 23535442 -65969111 - MSTB LTR MaLR 0 426 1 435 266 73 51 chr17 23535442 23535476 -65969077 - MIR SINE MIR -169 93 61 1652 144 70 0 chr17 23535574 23535844 -65968709 + AluJo SINE Alu 1 289 -23 271 307 30 0 chr17 23535866 23535967 -65968586 - MLT1J LTR MaLR -101 410 307 523 98 43 22 chr17 23535968 23536060 -65968493 - MER53 DNA DNA 0 189 96 1331 188 5 5 chr17 23536076 23536299 -65968254 - AluJb SINE Alu -13 299 77 37 52 0 0 chr17 23536307 23536365 -65968188 + AT_rich Low_complexity Low_complexity 1 58 0 836 224 142 29 chr17 23536386 23536667 -65967886 - MLT1J LTR MaLR -198 313 1 710 294 62 11 chr17 23536884 23537159 -65967394 + LTR16A1 LTR ERVL 138 426 -31 259 286 45 36 chr17 23537417 23537529 -65967024 - LTR33A LTR ERVL 0 523 411 259 256 26 77 chr17 23537707 23537748 -65966805 - MLT2E LTR ERVL -486 142 100 3395 188 17 21 chr17 23537748 23538141 -65966412 - MER82 DNA MER2_type 0 653 263 2270 114 0 22 chr17 23538141 23538457 -65966096 + AluSx SINE Alu 1 309 -3 3395 188 17 21 chr17 23538457 23538716 -65965837 - MER82 DNA MER2_type -390 263 4 259 256 26 77 chr17 23538716 23538791 -65965762 - MLT2E LTR ERVL -528 100 32 2108 267 75 29 chr17 23538903 23539963 -65964590 - L1MCb LINE L1 -4327 2795 1485 441 233 51 51 chr17 23539982 23540158 -65964395 - L1MCb LINE L1 -6228 195 20 998 224 77 112 chr17 23540391 23540953 -65963600 + MLT1H LTR MaLR 1 542 -7 861 244 0 15 chr17 23540954 23541151 -65963402 + MLT1J LTR MaLR 5 198 -313 2506 77 0 0 chr17 23542220 23542519 -65962034 + AluSx SINE Alu 1 299 -13 1024 50 0 0 chr17 23542780 23542900 -65961653 - AluY SINE Alu -190 121 2 585 300 45 0 chr17 23542901 23543101 -65961452 - L2 LINE L2 -1881 1433 1225 462 299 32 13 chr17 23543357 23543511 -65961042 - MIR SINE MIR -2 260 104 390 279 27 0 chr17 23543736 23543847 -65960706 + MER81 DNA DNA 1 114 0 1991 144 0 19 chr17 23543906 23544218 -65960335 - AluSq SINE Alu -7 306 1 281 167 0 0 chr17 23544382 23544430 -65960123 - MLT2B1 LTR ERVL 0 520 473 836 114 0 16 chr17 23544440 23544563 -65959990 - MLT2B1 LTR ERVL -242 278 158 1924 148 148 5 chr17 23544563 23544936 -65959617 - MSTB LTR MaLR 0 426 1 937 140 32 6 chr17 23544936 23545093 -65959460 - MLT2B1 LTR ERVL -358 162 2 413 306 35 29 chr17 23545236 23545406 -65959147 - MIR SINE MIR -47 215 45 415 240 43 70 chr17 23545993 23546212 -65958341 - LTR16A1 LTR ERVL -115 342 155 219 277 169 0 chr17 23546421 23546486 -65958067 + L2 LINE L2 3155 3230 -42 533 193 118 0 chr17 23547045 23547164 -65957389 + FLAM_C SINE Alu 1 133 0 2514 183 127 33 chr17 23547379 23548078 -65956475 - LTR50 LTR ERVL -24 771 7 2073 107 11 0 chr17 23548078 23548402 -65956151 + AluSx SINE Alu 1 327 0 2411 109 0 0 chr17 23549127 23549439 -65955114 + AluSx SINE Alu 1 312 0 234 41 41 41 chr17 23549462 23549511 -65955042 + (CAAAAA)n Simple_repeat Simple_repeat 4 52 0 294 276 95 57 chr17 23549521 23549626 -65954927 - L2 LINE L2 -38 3234 3126 437 118 0 0 chr17 23549749 23549817 -65954736 - MER53 DNA DNA 0 189 122 960 187 176 80 chr17 23550153 23550488 -65954065 + MLT2D LTR ERVL 2 479 -41 314 182 0 13 chr17 23550494 23550571 -65953982 + (TA)n Simple_repeat Simple_repeat 1 76 0 201 39 0 0 chr17 23550582 23550608 -65953945 + (TG)n Simple_repeat Simple_repeat 2 27 0 251 48 0 48 chr17 23550608 23550645 -65953908 + MLT2C1 LTR ERVL 355 389 -8 1901 166 27 27 chr17 23551523 23551897 -65952656 + MLT1A2 LTR MaLR 1 374 0 422 219 15 22 chr17 23551990 23552007 -65952546 - L1MA10 LINE L1 -2 6332 6316 1375 188 25 100 chr17 23552007 23552438 -65952115 - L1ME2 LINE L1 -9 6155 5757 777 291 83 28 chr17 23552493 23553330 -65951223 - L1ME3 LINE L1 -279 5883 5004 1057 48 0 0 chr17 23553407 23553532 -65951021 - AluY SINE Alu -11 300 176 2616 63 0 0 chr17 23553643 23553946 -65950607 - AluSg SINE Alu -7 303 1 249 298 141 53 chr17 23553946 23554245 -65950308 + L1ME2 LINE L1 3912 4236 -1910 769 233 81 91 chr17 23554248 23554865 -65949688 + L1ME2 LINE L1 4342 4952 -1194 1628 118 0 0 chr17 23554874 23555116 -65949437 + AluSq SINE Alu 63 304 0 1765 216 120 21 chr17 23555118 23555562 -65948991 + L1ME2 LINE L1 5280 5803 -367 2013 117 17 0 chr17 23555562 23555853 -65948700 + AluSx SINE Alu 1 296 -16 1765 216 120 21 chr17 23555853 23556023 -65948530 + L1ME2 LINE L1 5803 5955 -215 277 167 0 0 chr17 23556209 23556251 -65948302 - FLAM_A SINE Alu -15 118 77 230 242 15 30 chr17 23556262 23556328 -65948225 + L1ME2 LINE L1 6052 6116 -48 273 159 232 0 chr17 23556343 23556412 -65948141 - L1MB8 LINE L1 -1 6177 6093 1174 123 18 112 chr17 23556422 23556698 -65947855 - L1MB4 LINE L1 0 6180 5931 916 196 0 0 chr17 23559079 23559242 -65945311 - L1MB4 LINE L1 -237 5943 5781 331 229 29 0 chr17 23559242 23559312 -65945241 - MER2 DNA MER2_type 0 345 274 704 189 16 16 chr17 23559317 23559444 -65945109 + FLAM_A SINE Alu 7 133 -9 1227 102 87 15 chr17 23559484 23559680 -65944873 - MER2 DNA MER2_type -135 210 1 941 166 14 51 chr17 23559680 23559904 -65944649 - L1MB4 LINE L1 -398 5782 5548 824 209 121 47 chr17 23559912 23559971 -65944582 - L2 LINE L2 -1480 1834 1781 608 146 182 0 chr17 23559971 23560081 -65944472 - FLAM_A SINE Alu -3 130 1 824 209 121 47 chr17 23560081 23560318 -65944235 - L2 LINE L2 -1533 1781 1516 241 297 0 0 chr17 23560443 23560507 -65944046 - MIR3 SINE MIR -31 177 114 269 156 0 0 chr17 23560600 23560645 -65943908 + (TG)n Simple_repeat Simple_repeat 1 45 0 884 151 5 113 chr17 23560800 23561012 -65943541 - MER53 DNA DNA 0 189 1 224 370 56 6 chr17 23561548 23561710 -65942843 + MIR SINE MIR 64 233 -29 1877 103 88 0 chr17 23561881 23562153 -65942400 + AluSq SINE Alu 1 296 -17 2720 184 90 52 chr17 23562453 23563073 -65941480 + MLT1E1 LTR MaLR 3 646 -8 2135 127 0 6 chr17 23563226 23563540 -65941013 - AluSx SINE Alu 0 312 1 267 314 54 72 chr17 23563835 23564058 -65940495 + MLT1L LTR MaLR 1 219 -369 * 366 303 60 22 chr17 23564050 23564235 -65940318 + MLT1L LTR MaLR 424 615 0 323 226 141 63 chr17 23564267 23564321 -65940232 - MLT1J LTR MaLR -24 487 439 186 43 0 0 chr17 23564321 23564344 -65940209 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 323 226 141 63 chr17 23564344 23564610 -65939943 - MLT1J LTR MaLR -72 439 111 231 247 41 27 chr17 23564553 23564626 -65939927 - LTR67 LTR ERVL -385 172 99 * 184 366 10 0 chr17 23564812 23564913 -65939640 + L2 LINE L2 2213 2314 -1000 498 196 0 0 chr17 23565465 23565567 -65938986 + GA-rich Low_complexity Low_complexity 3 104 0 392 271 37 0 chr17 23565634 23565741 -65938812 + MIR3 SINE MIR 97 207 -1 2278 86 7 0 chr17 23565998 23566290 -65938263 + AluSg SINE Alu 1 294 -16 665 306 28 7 chr17 23566314 23566598 -65937955 - L1M4 LINE L1 -1095 5051 4762 332 216 93 55 chr17 23566627 23566863 -65937690 - L1M4 LINE L1 -1724 4422 4178 2295 133 109 122 chr17 23566876 23567344 -65937209 + MLT2D LTR ERVL 3 464 0 415 265 63 97 chr17 23567345 23567487 -65937066 - L1M4 LINE L1 -1977 4169 4024 1897 160 0 0 chr17 23567487 23567787 -65936766 - AluSx SINE Alu -12 300 1 415 265 63 97 chr17 23567787 23568033 -65936520 - L1M4 LINE L1 -2122 4024 3771 2374 68 0 0 chr17 23568033 23568326 -65936227 - AluY SINE Alu -18 293 1 415 265 63 97 chr17 23568326 23568455 -65936098 - L1M4 LINE L1 -2375 3771 3639 1704 124 70 24 chr17 23568455 23568753 -65935800 - AluSx SINE Alu 0 312 1 415 265 63 97 chr17 23568753 23568796 -65935757 - L1M4 LINE L1 -2507 3639 3596 3336 64 2 9 chr17 23568796 23569232 -65935321 + L1PA8 LINE L1 5738 6170 -2 415 265 63 97 chr17 23569232 23569354 -65935199 - L1M4 LINE L1 -2550 3596 3471 2285 64 10 0 chr17 23569354 23569651 -65934902 - AluY SINE Alu -11 300 1 415 265 63 97 chr17 23569651 23569784 -65934769 - L1M4 LINE L1 -2675 3471 3335 2408 58 3 0 chr17 23569784 23570078 -65934475 - AluY SINE Alu -16 295 1 415 265 63 97 chr17 23570078 23570213 -65934340 - L1M4 LINE L1 -2811 3335 3142 1669 260 29 14 chr17 23571312 23571755 -65932798 - LTR16A LTR ERVL 0 450 1 757 330 41 34 chr17 23571879 23572410 -65932143 - HERV16 LTR ERVL -381 5383 4849 2326 60 0 32 chr17 23572423 23572738 -65931815 - AluY SINE Alu -6 305 1 2133 119 3 0 chr17 23572791 23573101 -65931452 - AluSx SINE Alu -1 311 1 3437 207 39 13 chr17 23573295 23574147 -65930406 - L1M4 LINE L1 -989 5393 4520 1838 150 0 29 chr17 23574165 23574244 -65930309 - AluJo SINE Alu -8 304 224 7977 116 50 10 chr17 23574244 23575472 -65929081 + MER52C LTR ERV1 1 1278 0 1838 150 0 29 chr17 23575472 23575705 -65928848 - AluJo SINE Alu -88 224 1 764 211 0 32 chr17 23575735 23575891 -65928662 - MLT1D LTR MaLR -42 463 313 3069 217 42 10 chr17 23575993 23576777 -65927776 - L1M4 LINE L1 -2028 4354 3546 4860 83 0 29 chr17 23576797 23577493 -65927060 + L1PB1 LINE L1 5475 6150 -1 485 271 0 0 chr17 23577502 23577620 -65926933 + L1M4 LINE L1 3775 3892 -2254 501 212 20 0 chr17 23577625 23577776 -65926777 - L1M4 LINE L1 -2852 3530 3377 692 326 27 30 chr17 23577785 23578145 -65926408 - HERV16 LTR ERVL -1593 3694 3162 1266 281 92 19 chr17 23578152 23578398 -65926155 - HERV16 LTR ERVL -3546 1450 1223 1808 172 30 60 chr17 23578398 23578800 -65925753 - MLT1B LTR MaLR 0 390 1 1266 281 92 19 chr17 23578800 23579020 -65925533 - HERV16 LTR ERVL -3773 1223 950 1936 186 49 55 chr17 23579030 23579499 -65925054 - MLT1C LTR MaLR 0 467 2 785 275 73 29 chr17 23579501 23579774 -65924779 - HERV16 LTR ERVL -4053 943 659 2049 198 37 28 chr17 23579774 23580225 -65924328 - L1PA15-16 LINE L1 -3805 2577 2132 1794 170 0 13 chr17 23580225 23580531 -65924022 - AluJo SINE Alu -10 302 1 2049 198 37 28 chr17 23580531 23580722 -65923831 - L1PA15-16 LINE L1 -4250 2132 1944 2061 134 0 3 chr17 23580722 23581029 -65923524 - AluSx SINE Alu -6 306 1 2049 198 37 28 chr17 23581029 23581240 -65923313 - L1PA15-16 LINE L1 -4438 1944 1646 2039 182 96 15 chr17 23581277 23581672 -65922881 - L1M4 LINE L1 -5656 886 460 1097 184 19 10 chr17 23581671 23581878 -65922675 - L1M4 LINE L1 -6331 211 3 * 964 295 7 18 chr17 23581878 23582156 -65922397 - HERV16 LTR ERVL -4335 661 387 278 232 14 14 chr17 23582156 23582225 -65922328 + HERV16 LTR ERVL 171 239 -4757 929 126 14 34 chr17 23582233 23582440 -65922113 + L1MA7 LINE L1 6087 6289 -2 463 247 52 17 chr17 23582765 23582939 -65921614 + L1M4 LINE L1 2316 2495 -3651 228 111 0 0 chr17 23582981 23583017 -65921536 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 739 236 7 0 chr17 23583019 23583163 -65921390 - FRAM SINE Alu -31 145 1 656 280 40 24 chr17 23583170 23583499 -65921054 + L1M4 LINE L1 2539 2872 -3274 1353 107 51 5 chr17 23583506 23583898 -65920655 - L1PA16 LINE L1 -9 6157 5708 * 1560 255 18 4 chr17 23583897 23584032 -65920521 + L1M4 LINE L1 2913 3045 -3101 2274 66 3 0 chr17 23584032 23584320 -65920233 + AluY SINE Alu 1 289 -22 1560 255 18 4 chr17 23584320 23584694 -65919859 + L1M4 LINE L1 3045 3429 -2717 818 173 0 0 chr17 23584700 23584833 -65919720 + FLAM_C SINE Alu 1 133 -10 856 282 23 80 chr17 23584834 23585358 -65919195 + L1M4 LINE L1 3432 3925 -2221 1712 162 0 0 chr17 23585369 23585677 -65918876 - AluSg SINE Alu -2 308 1 6169 101 13 4 chr17 23585896 23587327 -65917226 - L1PA16 LINE L1 -11 6155 4716 222 37 0 0 chr17 23587494 23587521 -65917032 + (TTCC)n Simple_repeat Simple_repeat 2 28 0 381 258 118 0 chr17 23587521 23587614 -65916939 - L2 LINE L2 -16 3297 3194 201 349 128 20 chr17 23587589 23587738 -65916815 + L2 LINE L2 3101 3265 -7 * 2725 109 33 19 chr17 23587951 23588373 -65916180 - MSTA LTR MaLR 0 428 1 622 307 68 0 chr17 23588626 23588818 -65915735 + MIR SINE MIR 20 224 -38 701 180 35 23 chr17 23588818 23588990 -65915563 + L1MA8 LINE L1 5931 6104 -187 469 179 13 0 chr17 23589074 23589152 -65915401 - Tigger5 DNA MER2_type -2244 79 1 656 229 66 0 chr17 23589159 23589325 -65915228 + L1MA8 LINE L1 6112 6288 -3 2335 143 121 5 chr17 23589337 23589757 -65914796 - MER31A LTR ERV1 -16 469 1 829 161 161 0 chr17 23589757 23589918 -65914635 + MER5A DNA MER1_type 3 189 0 561 192 8 46 chr17 23590016 23590146 -65914407 + MER5B DNA MER1_type 18 142 -36 886 183 39 0 chr17 23590146 23590326 -65914227 - MER5A DNA MER1_type -2 187 1 768 143 30 23 chr17 23590814 23590947 -65913606 - FLAM_C SINE Alu -1 142 9 469 188 119 10 chr17 23591024 23591125 -65913428 + L2 LINE L2 3196 3307 -6 262 327 29 0 chr17 23591309 23591413 -65913140 - L2 LINE L2 -214 3058 2952 357 253 13 0 chr17 23591841 23591920 -65912633 - MIR SINE MIR -70 192 113 493 155 54 70 chr17 23592357 23592486 -65912067 + MIR3 SINE MIR 61 187 -21 2206 115 0 3 chr17 23592640 23592952 -65911601 - AluSx SINE Alu -1 311 1 1506 133 25 4 chr17 23593564 23593805 -65910748 + AluJb SINE Alu 34 279 -33 301 231 123 0 chr17 23594149 23594214 -65910339 + L2 LINE L2 3193 3265 -7 300 263 95 11 chr17 23594224 23594319 -65910234 - MIR SINE MIR -79 183 81 312 306 0 0 chr17 23594485 23594658 -65909895 + (TG)n Simple_repeat Simple_repeat 2 174 0 211 225 0 0 chr17 23594660 23594700 -65909853 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 578 246 3 0 chr17 23594707 23595041 -65909512 + (TG)n Simple_repeat Simple_repeat 1 335 0 1655 192 24 87 chr17 23595324 23595747 -65908806 + MLT2C2 LTR ERVL 1 391 -73 1969 121 0 0 chr17 23595747 23596060 -65908493 - AluSx SINE Alu 0 315 3 1655 192 24 87 chr17 23596060 23596129 -65908424 + MLT2C2 LTR ERVL 391 463 -1 1534 230 16 29 chr17 23596520 23596899 -65907654 - MLT1A2 LTR MaLR 0 374 1 1173 117 99 33 chr17 23597341 23597399 -65907154 - L1MC2 LINE L1 -340 6004 5951 2111 115 0 3 chr17 23597399 23597704 -65906849 - AluSq SINE Alu -9 304 1 1173 117 99 33 chr17 23597704 23597858 -65906695 - L1MC2 LINE L1 -393 5951 5778 420 146 0 104 chr17 23598167 23598224 -65906329 + MER94 DNA DNA 26 72 -62 1999 131 0 0 chr17 23598224 23598540 -65906013 + AluSx SINE Alu 1 316 0 420 146 0 104 chr17 23598540 23598577 -65905976 + MER94 DNA DNA 72 111 -23 423 221 32 11 chr17 23598804 23598899 -65905654 - MLT1J1 LTR MaLR -108 338 242 * 424 216 23 0 chr17 23598893 23598981 -65905572 + MER81 DNA DNA 22 111 -3 814 251 62 41 chr17 23598984 23599227 -65905326 - MLT1J1 LTR MaLR -192 254 7 1728 193 134 43 chr17 23600210 23600650 -65903903 - MLT1D LTR MaLR 0 505 26 517 272 95 0 chr17 23600827 23600985 -65903568 - MIR SINE MIR -70 192 20 786 170 14 20 chr17 23601584 23601731 -65902822 - AluJb SINE Alu -165 147 2 198 0 0 0 chr17 23601792 23601814 -65902739 + (T)n Simple_repeat Simple_repeat 1 22 0 459 253 117 19 chr17 23602042 23602196 -65902357 - MLT1J2 LTR MaLR -22 428 260 403 189 0 0 chr17 23602259 23602349 -65902204 - AluSc SINE Alu -1 308 219 393 315 0 9 chr17 23602370 23602481 -65902072 - MLT1I LTR MaLR -270 139 30 2454 193 27 17 chr17 23602485 23602928 -65901625 + MER82 DNA MER2_type 1 451 -202 5354 149 38 1 chr17 23602928 23603795 -65900758 - MER54A LTR ERVL 0 901 3 2454 193 27 17 chr17 23603795 23603834 -65900719 + MER82 DNA MER2_type 451 488 -165 1089 135 79 0 chr17 23603835 23604013 -65900540 - LTR47A LTR ERVL 0 452 261 756 262 24 0 chr17 23604233 23604397 -65900156 + MER82 DNA MER2_type 485 652 -1 1755 211 89 77 chr17 23604404 23604986 -65899567 - MLT1G1 LTR MaLR -6 589 1 1102 243 94 45 chr17 23605203 23605651 -65898902 + MLT1H LTR MaLR 58 527 -22 1840 152 0 29 chr17 23605924 23606239 -65898314 - AluJo SINE Alu -6 306 1 1957 115 3 16 chr17 23606836 23607141 -65897412 - AluSq SINE Alu -12 301 1 252 196 0 20 chr17 23607157 23607208 -65897345 - MLT1I LTR MaLR 0 409 360 757 209 0 50 chr17 23607334 23607516 -65897037 - MLT1J1 LTR MaLR -253 193 21 1394 235 66 47 chr17 23608299 23608724 -65895829 + MLT2F LTR ERVL 1 433 -230 578 143 0 41 chr17 23608758 23608856 -65895697 + FRAM SINE Alu 68 161 -15 2193 185 26 11 chr17 23608884 23609262 -65895291 + MLT1F1 LTR MaLR 179 562 -5 621 261 39 0 chr17 23609270 23609450 -65895103 + MLT2F LTR ERVL 476 662 -1 296 129 113 32 chr17 23609507 23609569 -65894984 - MER5B DNA MER1_type 0 178 112 2344 81 0 0 chr17 23609570 23609877 -65894676 + AluY SINE Alu 1 307 -4 245 98 24 0 chr17 23609877 23609918 -65894635 + (GA)n Simple_repeat Simple_repeat 1 42 0 649 211 16 0 chr17 23609919 23610047 -65894506 - MER5B DNA MER1_type -48 130 1 194 319 0 0 chr17 23610354 23610401 -65894152 + L3 LINE CR1 1521 1567 -10 * 338 290 46 23 chr17 23610392 23610523 -65894030 + MIR3 SINE MIR 44 177 -31 1355 262 55 8 chr17 23610542 23610924 -65893629 - LTR16A LTR ERVL -21 429 30 2122 158 7 9 chr17 23610934 23611286 -65893267 - MLT1A1 LTR MaLR -11 446 1 2065 109 17 3 chr17 23612179 23612472 -65892081 + AluSx SINE Alu 1 297 -15 190 294 153 0 chr17 23612768 23612853 -65891700 - L2 LINE L2 -31 3241 3144 2228 160 11 6 chr17 23612861 23613224 -65891329 - MLT1A1 LTR MaLR 0 365 1 256 248 15 98 chr17 23614946 23615079 -65889474 - MIR SINE MIR -51 211 90 1744 214 98 37 chr17 23615089 23615571 -65888982 - MLT1J LTR MaLR 0 511 1 917 100 31 8 chr17 23615639 23615769 -65888784 - FLAM_C SINE Alu 0 133 1 2096 71 0 0 chr17 23615836 23616105 -65888448 - AluY SINE Alu -1 310 42 538 333 101 43 chr17 23616135 23616510 -65888043 - L3 LINE CR1 -1 1576 1180 237 222 0 0 chr17 23616857 23616902 -65887651 - MLT1J LTR MaLR -1 510 466 576 230 42 118 chr17 23616917 23617093 -65887460 - MLT1J LTR MaLR -119 496 308 2090 129 0 0 chr17 23617093 23617396 -65887157 - AluSx SINE Alu -8 304 2 576 230 42 118 chr17 23617396 23617528 -65887025 - MLT1J LTR MaLR -307 308 111 246 320 51 0 chr17 23617613 23617691 -65886862 + MIR3 SINE MIR 115 196 -12 2198 98 3 0 chr17 23617739 23618046 -65886507 + AluSq SINE Alu 1 308 -5 672 253 53 16 chr17 23618074 23618264 -65886289 + MIR SINE MIR 46 242 -20 1009 166 0 11 chr17 23619031 23619206 -65885347 + MLT1B LTR MaLR 1 173 -217 1258 141 0 0 chr17 23619206 23619397 -65885156 + AluJo SINE Alu 1 191 -121 236 77 26 0 chr17 23619418 23619457 -65885096 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 1311 175 5 0 chr17 23619459 23619682 -65884871 + MLT1B LTR MaLR 167 390 0 3396 153 83 3 chr17 23619867 23620443 -65884110 + LTR26E LTR ERV1 1 622 0 1616 196 58 13 chr17 23620450 23620843 -65883710 - MER69 DNA AcHobo -27 2499 2089 * 2372 223 131 30 chr17 23620842 23620981 -65883572 - MER69 DNA AcHobo -1288 1238 1114 234 0 0 0 chr17 23620981 23621007 -65883546 + (TG)n Simple_repeat Simple_repeat 1 26 0 2372 223 131 30 chr17 23621007 23621567 -65882986 - MER69 DNA AcHobo -1412 1114 468 1098 228 123 9 chr17 23621569 23622067 -65882486 + MLT1G1 LTR MaLR 3 586 -9 534 262 49 43 chr17 23622076 23622240 -65882313 - MER69 DNA AcHobo -2054 472 308 1815 238 65 26 chr17 23622380 23622914 -65881639 - MLT1H1 LTR MaLR 0 555 1 1171 250 73 18 chr17 23623297 23623625 -65880928 - LTR16C LTR ERVL 0 491 146 392 320 129 6 chr17 23624261 23624439 -65880114 + MIR3 SINE MIR 9 208 0 554 128 13 0 chr17 23624581 23624659 -65879894 - Tigger7 DNA MER2_type -3 2484 2406 2356 173 41 3 chr17 23624679 23625066 -65879487 - Tigger7 DNA MER2_type -2085 402 1 287 185 0 0 chr17 23625445 23625470 -65879083 - MSTA LTR MaLR 0 428 404 2726 80 11 0 chr17 23625470 23625819 -65878734 - THE1A LTR MaLR -2 353 1 287 185 0 0 chr17 23625819 23625847 -65878706 - MSTA LTR MaLR -23 405 375 2324 124 59 8 chr17 23625875 23626246 -65878307 - MSTA LTR MaLR -38 390 1 419 270 217 17 chr17 23626357 23626587 -65877966 - MLT1L LTR MaLR -10 605 330 267 231 106 39 chr17 23626748 23626852 -65877701 - MLT1L LTR MaLR -356 259 149 200 296 0 0 chr17 23627841 23627895 -65876658 + GA-rich Low_complexity Low_complexity 2 55 0 2690 251 45 21 chr17 23627915 23628691 -65875862 + L1ME3A LINE L1 5371 6165 -5 501 155 62 21 chr17 23628902 23628999 -65875554 - MER69 DNA AcHobo -1125 101 1 531 220 47 33 chr17 23628999 23629149 -65875404 - MIR SINE MIR -5 257 106 1463 128 90 45 chr17 23629304 23629593 -65874960 - AluJo SINE Alu -10 302 1 215 309 0 0 chr17 23629944 23629999 -65874554 - L2 LINE L2 -10 3262 3208 423 297 100 17 chr17 23630087 23630287 -65874266 - MIR SINE MIR -37 225 15 1702 227 58 13 chr17 23630564 23631027 -65873526 - L1M4 LINE L1 -1721 4425 3942 547 218 44 92 chr17 23631482 23631563 -65872990 - L1MC4 LINE L1 -2 8040 7957 1153 198 40 125 chr17 23631563 23631962 -65872591 + MLT1A1 LTR MaLR 1 365 0 547 218 44 92 chr17 23631962 23632023 -65872530 - L1MC4 LINE L1 -85 7957 7895 387 165 13 0 chr17 23632023 23632102 -65872451 - MER116 DNA Mariner 0 80 1 547 218 44 92 chr17 23632102 23632251 -65872302 - L1MC4 LINE L1 -147 7895 7762 3156 179 7 11 chr17 23632261 23632798 -65871755 + MLT1F LTR MaLR 1 535 -7 597 222 9 0 chr17 23633049 23633157 -65871396 - MIR SINE MIR -153 109 1 580 218 123 74 chr17 23633605 23633673 -65870880 + LTR16C LTR ERVL 3 66 -425 1347 123 15 0 chr17 23633673 23633877 -65870676 + MER3 DNA MER1_type 3 209 0 580 218 123 74 chr17 23633877 23634241 -65870312 + LTR16C LTR ERVL 66 491 0 1541 185 3 23 chr17 23634899 23635207 -65869346 - AluJb SINE Alu -5 307 6 255 350 48 19 chr17 23636047 23636150 -65868403 - MIR SINE MIR -61 147 42 1584 198 91 39 chr17 23636281 23636690 -65867863 - LTR16C LTR ERVL 0 491 62 585 342 119 32 chr17 23637481 23637852 -65866701 - L2 LINE L2 -6 3266 2864 690 147 92 65 chr17 23638213 23638299 -65866254 + MER53 DNA DNA 1 83 -106 2101 102 7 0 chr17 23638299 23638594 -65865959 + AluSx SINE Alu 1 297 -15 690 147 92 65 chr17 23638594 23638691 -65865862 + MER53 DNA DNA 83 189 0 294 315 0 0 chr17 23638696 23638785 -65865768 + MLT1K LTR MaLR 144 232 -356 232 232 37 37 chr17 23638972 23639054 -65865499 + MLT1K LTR MaLR 468 549 -39 554 103 0 35 chr17 23639403 23639490 -65865063 - AluJo SINE Alu -8 304 221 1172 176 0 9 chr17 23639591 23639807 -65864746 - AluJo SINE Alu -98 214 1 312 206 11 98 chr17 23639962 23640054 -65864499 - MIR3 SINE MIR -17 191 108 441 289 177 10 chr17 23641078 23641299 -65863254 - MIR SINE MIR -6 256 3 1710 269 92 12 chr17 23641443 23641945 -65862608 - MLT1H1 LTR MaLR -2 553 12 1753 172 0 3 chr17 23642167 23642464 -65862089 - AluJo SINE Alu -16 296 1 1051 233 85 89 chr17 23643123 23643629 -65860924 - MLT1H1 LTR MaLR -11 544 41 1293 188 31 27 chr17 23643776 23644032 -65860521 - MIR SINE MIR 0 262 6 250 320 20 30 chr17 23644051 23644108 -65860445 - L2 LINE L2 -33 3239 3182 1383 255 45 55 chr17 23644108 23644622 -65859931 + MLT1J LTR MaLR 1 509 -2 250 320 20 30 chr17 23644622 23644664 -65859889 - L2 LINE L2 -90 3182 3141 5248 162 19 3 chr17 23646112 23647479 -65857074 - L1MB5 LINE L1 -8 6166 4778 5994 127 26 40 chr17 23647490 23647652 -65856901 - L1MC1 LINE L1 -88 6245 6082 902 133 0 22 chr17 23647652 23647787 -65856766 - FLAM_C SINE Alu 0 133 2 5994 127 26 40 chr17 23647787 23648694 -65855859 - L1MC1 LINE L1 -251 6082 5185 482 237 0 0 chr17 23648684 23648781 -65855772 - L1MC1 LINE L1 -1771 4375 4279 * 1957 120 0 33 chr17 23648842 23649143 -65855410 + AluSx SINE Alu 5 295 -17 570 243 269 36 chr17 23649143 23649448 -65855105 - MLT1K LTR MaLR -50 538 163 204 125 0 0 chr17 23649590 23649622 -65854931 + L2 LINE L2 3282 3313 0 2261 69 7 0 chr17 23649787 23650076 -65854477 - AluY SINE Alu -20 291 1 1740 224 89 14 chr17 23650585 23650956 -65853597 + MLT1G1 LTR MaLR 1 399 -196 296 164 180 0 chr17 23650968 23651029 -65853524 + MLT1F LTR MaLR 3 74 -468 259 282 129 0 chr17 23651195 23651280 -65853273 + MLT1F1 LTR MaLR 71 166 -401 1355 192 143 54 chr17 23651359 23651708 -65852845 + MLT1F1 LTR MaLR 188 567 0 650 253 13 26 chr17 23651723 23651877 -65852676 + MLT1G1 LTR MaLR 438 589 -6 1944 144 0 26 chr17 23651901 23652213 -65852340 + AluSx SINE Alu 1 304 -8 1425 157 5 0 chr17 23652288 23652511 -65852042 - MLT1B LTR MaLR 0 390 167 2114 80 0 0 chr17 23652536 23652800 -65851753 + THE1A LTR MaLR 1 264 -91 212 288 144 27 chr17 23653791 23653902 -65850651 + MIR SINE MIR 23 146 -62 332 264 91 77 chr17 23653954 23654000 -65850553 - MLT1L LTR MaLR -56 559 515 2011 128 0 25 chr17 23654000 23654319 -65850234 + AluJo SINE Alu 1 311 -1 332 264 91 77 chr17 23654319 23654673 -65849880 - MLT1L LTR MaLR -100 515 120 936 108 0 0 chr17 23654688 23654846 -65849707 + AluSg/x SINE Alu 153 310 0 180 309 12 48 chr17 23655579 23655663 -65848890 - MIR SINE MIR -77 185 105 724 209 7 0 chr17 23656188 23656341 -65848212 - MER74A LTR ERVL -124 434 281 407 277 173 14 chr17 23656525 23656745 -65847808 + LTR16A LTR ERVL 12 266 -184 2442 179 18 7 chr17 23656745 23657198 -65847355 - LTR32 LTR ERVL 0 471 14 477 256 158 6 chr17 23657216 23657380 -65847173 + LTR16A LTR ERVL 262 450 0 1926 182 81 74 chr17 23658544 23659080 -65845473 - MER74A LTR ERVL 0 558 16 1818 97 0 0 chr17 23659080 23659308 -65845245 + AluSg/x SINE Alu 77 304 -6 1926 182 81 74 chr17 23659308 23659325 -65845228 - MER74A LTR ERVL -542 16 1 408 247 60 23 chr17 23659405 23659646 -65844907 + L1MC4a LINE L1 5695 5821 -357 438 258 38 16 chr17 23659819 23660005 -65844548 - LTR16B LTR ERVL -144 320 131 223 313 179 0 chr17 23660657 23660769 -65843784 - L2 LINE L2 -216 3056 2925 2507 90 0 0 chr17 23660770 23661080 -65843473 + AluSq SINE Alu 1 310 -3 356 264 72 45 chr17 23661265 23661475 -65843078 - MLT1K LTR MaLR -229 386 183 360 250 190 67 chr17 23662297 23662545 -65842008 + MER5C DNA MER1_type 5 294 -30 207 0 0 0 chr17 23662545 23662568 -65841985 + (TA)n Simple_repeat Simple_repeat 1 23 0 360 250 190 67 chr17 23662568 23662603 -65841950 + MER5C DNA MER1_type 294 323 -1 361 298 57 117 chr17 23662703 23663072 -65841481 + L2 LINE L2 2918 3264 -8 2149 137 7 0 chr17 23663109 23663408 -65841145 + AluJb SINE Alu 1 301 -11 2056 109 43 31 chr17 23663413 23663762 -65840791 - L1MB3 LINE L1 -19 6164 5812 431 242 129 62 chr17 23664058 23664255 -65840298 + MIR SINE MIR 1 214 -48 1323 170 21 118 chr17 23664460 23664790 -65839763 + AluY SINE Alu 1 298 -13 658 249 55 67 chr17 23665020 23665438 -65839115 + LTR33 LTR ERVL 8 420 -101 288 208 13 13 chr17 23666034 23666111 -65838442 + MLT1K LTR MaLR 183 259 -329 203 278 0 0 chr17 23666175 23666229 -65838324 - L2 LINE L2 -34 3279 3226 664 241 37 7 chr17 23667796 23668140 -65836413 - MLT1J2 LTR MaLR 0 450 61 1509 165 0 21 chr17 23668282 23668525 -65836028 + AluJb SINE Alu 1 238 -74 1120 142 6 11 chr17 23668547 23668730 -65835823 + MLT1C LTR MaLR 283 464 -3 481 292 72 74 chr17 23668773 23668971 -65835582 - HAL1 LINE L1 -273 2234 2037 2004 120 39 11 chr17 23668971 23669254 -65835299 - AluSx SINE Alu -21 291 1 481 292 72 74 chr17 23669254 23669569 -65834984 - HAL1 LINE L1 -470 2037 1722 249 192 39 44 chr17 23669570 23669648 -65834905 - MLT1F1 LTR MaLR -2 585 496 1001 235 77 81 chr17 23669659 23670203 -65834350 - HAL1 LINE L1 -1965 542 1 11302 82 7 5 chr17 23670984 23672517 -65832036 + THE1A-int LTR MaLR 45 1580 0 2391 73 117 0 chr17 23672519 23672835 -65831718 + THE1A LTR MaLR 3 355 0 518 237 0 0 chr17 23672835 23672928 -65831625 - FLAM_A SINE Alu -49 93 1 785 208 22 17 chr17 23672928 23673106 -65831447 - MLT1B LTR MaLR -211 179 1 1008 207 0 0 chr17 23673174 23673343 -65831210 + FAM SINE Alu 2 170 -5 201 269 58 19 chr17 23674144 23674196 -65830357 - L2 LINE L2 -9 3304 3251 2239 117 7 0 chr17 23674488 23674787 -65829766 - AluSx SINE Alu -11 301 1 2276 108 0 0 chr17 23676234 23676530 -65828023 - AluJb SINE Alu -16 296 1 348 272 78 0 chr17 23676674 23676777 -65827776 - MIR SINE MIR -8 254 144 1469 186 35 22 chr17 23676781 23677233 -65827320 + MLT2B1 LTR ERVL 5 501 -19 282 96 0 137 chr17 23677245 23677318 -65827235 + MLT2B3 LTR ERVL 458 554 0 9844 181 33 12 chr17 23677319 23678983 -65825570 + ERVL-B3 LTR ERVL 2 1708 -4056 3900 74 10 10 chr17 23678983 23679496 -65825057 - LTR10D LTR ERV1 0 513 1 9844 181 33 12 chr17 23679496 23679673 -65824880 + ERVL-B3 LTR ERVL 1708 1880 -3884 243 109 43 22 chr17 23679673 23679719 -65824834 + MLT2B1 LTR ERVL 474 520 0 284 189 311 19 chr17 23679719 23679825 -65824728 - MIR SINE MIR -114 148 12 301 290 203 14 chr17 23680076 23680214 -65824339 + MIR3 SINE MIR 36 199 -9 1217 125 111 0 chr17 23680320 23680536 -65824017 - MSTB1 LTR MaLR -1 431 192 1092 126 0 0 chr17 23680537 23680734 -65823819 - AluSq SINE Alu 0 336 140 310 50 0 0 chr17 23680734 23680774 -65823779 - MSTB1 LTR MaLR -386 40 1 402 287 116 0 chr17 23680802 23680966 -65823587 + MIR SINE MIR 52 234 -28 221 368 0 43 chr17 23681371 23681556 -65822997 + (TATATG)n Simple_repeat Simple_repeat 3 179 0 1018 194 0 0 chr17 23681637 23681807 -65822746 + FRAM SINE Alu 1 170 -6 3332 200 46 47 chr17 23682020 23682808 -65821745 + L1MD2 LINE L1 4505 5292 -1067 2267 107 13 7 chr17 23682808 23683116 -65821437 + AluSg SINE Alu 1 310 0 3332 200 46 47 chr17 23683116 23683945 -65820608 + L1MD2 LINE L1 5292 6141 -218 240 35 0 0 chr17 23684005 23684034 -65820519 + (CA)n Simple_repeat Simple_repeat 1 29 0 494 272 122 9 chr17 23684664 23684877 -65819676 + L1ME4a LINE L1 5789 6025 -96 593 221 74 42 chr17 23686209 23686399 -65818154 - MLT1H1 LTR MaLR -350 205 10 400 277 36 0 chr17 23686847 23686959 -65817594 + MIR3 SINE MIR 87 202 -6 1454 236 102 63 chr17 23687618 23688185 -65816368 + MLT1G1 LTR MaLR 2 590 -5 517 294 27 38 chr17 23688217 23688401 -65816152 + MER5A DNA MER1_type 8 189 0 753 237 56 103 chr17 23688597 23689006 -65815547 + MLT1J LTR MaLR 122 511 0 406 284 153 27 chr17 23689416 23689599 -65814954 - MIR SINE MIR -29 233 28 1151 309 18 15 chr17 23690632 23691023 -65813530 + MLT1I LTR MaLR 1 392 -17 1422 116 50 12 chr17 23691244 23691503 -65813050 - L1MA4 LINE L1 -7 6293 6025 2371 130 0 12 chr17 23691505 23691843 -65812710 + MER1B DNA MER1_type 4 337 0 1990 140 0 0 chr17 23692862 23693141 -65811412 - AluJo SINE Alu -28 284 6 582 255 62 6 chr17 23693299 23693460 -65811093 - MIR SINE MIR -41 221 52 572 257 81 88 chr17 23693557 23693749 -65810804 + L2 LINE L2 2555 2747 -525 2140 118 7 23 chr17 23693749 23694054 -65810499 - AluSx SINE Alu -12 300 1 572 257 81 88 chr17 23694054 23694329 -65810224 + L2 LINE L2 2747 3019 -253 301 70 0 0 chr17 23694399 23694442 -65810111 - MADE1 DNA Mariner -37 43 1 2255 116 0 10 chr17 23694826 23695136 -65809417 - AluSx SINE Alu -5 307 1 249 209 0 0 chr17 23695305 23695348 -65809205 - L2 LINE L2 -17 3255 3213 1656 177 115 100 chr17 23695367 23695617 -65808936 - MLT1F1 LTR MaLR -2 565 320 2683 125 29 10 chr17 23695617 23696033 -65808520 - MSTB LTR MaLR -2 424 1 1656 177 115 100 chr17 23696033 23696314 -65808239 - MLT1F1 LTR MaLR -247 320 1 222 309 111 0 chr17 23696322 23696403 -65808150 - MIR SINE MIR -70 192 103 2451 140 12 31 chr17 23696403 23696766 -65807787 + MLT2C2 LTR ERVL 1 357 -107 2028 141 0 45 chr17 23696766 23697078 -65807475 + AluSx SINE Alu 1 298 -14 2451 140 12 31 chr17 23697078 23697127 -65807426 + MLT2C2 LTR ERVL 357 405 -59 246 62 0 0 chr17 23697131 23697163 -65807390 + (TCTA)n Simple_repeat Simple_repeat 3 34 0 1275 241 100 39 chr17 23697166 23697677 -65806876 + MER34 LTR ERV1 1 542 0 210 37 0 0 chr17 23697681 23697708 -65806845 + (CA)n Simple_repeat Simple_repeat 2 28 0 284 119 0 0 chr17 23697709 23697751 -65806802 + MLT2C2 LTR ERVL 356 397 0 196 261 22 0 chr17 23697753 23697799 -65806754 - MIR SINE MIR -157 105 59 1572 233 128 41 chr17 23697859 23698392 -65806161 + MLT1G1 LTR MaLR 1 579 -16 447 321 172 17 chr17 23698393 23698461 -65806092 - L2 LINE L2 -43 3270 3214 1952 174 49 3 chr17 23698461 23698806 -65805747 - MLT1A1 LTR MaLR -4 361 1 447 321 172 17 chr17 23698806 23699033 -65805520 - L2 LINE L2 -99 3214 2929 1580 149 54 0 chr17 23699157 23699398 -65805155 - AluJb SINE Alu -15 297 44 1700 179 0 43 chr17 23699398 23699721 -65804832 - AluJb SINE Alu -2 310 1 1607 217 32 11 chr17 23700613 23700986 -65803567 + L1ME3 LINE L1 5754 6134 -28 501 250 68 8 chr17 23700986 23701118 -65803435 + FLAM_A SINE Alu 2 141 -1 1626 204 6 12 chr17 23701326 23701654 -65802899 - MLT1A1 LTR MaLR 0 365 40 197 184 0 0 chr17 23802105 23802143 -65702410 + MIR SINE MIR 80 117 -145 522 233 136 17 chr17 23802832 23803008 -65701545 - MIR SINE MIR -26 236 40 263 312 11 11 chr17 23803816 23803909 -65700644 + (CGTG)n Simple_repeat Simple_repeat 2 94 0 381 93 0 0 chr17 23803926 23803980 -65700573 + (TG)n Simple_repeat Simple_repeat 1 54 0 201 39 0 0 chr17 23804091 23804117 -65700436 + (CGCGG)n Simple_repeat Simple_repeat 1 26 0 585 294 82 5 chr17 23804477 23804661 -65699892 - MIR SINE MIR -1 261 64 254 250 91 11 chr17 23805099 23805187 -65699366 - MIR3 SINE MIR -52 156 62 347 324 94 0 chr17 23805659 23805829 -65698724 + LTR16C LTR ERVL 37 222 -269 530 208 113 0 chr17 23805861 23806020 -65698533 + LTR16C LTR ERVL 281 457 -34 232 157 0 48 chr17 23806109 23806192 -65698361 + CT-rich Low_complexity Low_complexity 1 79 0 255 347 0 10 chr17 23806399 23806497 -65698056 + (TGGA)n Simple_repeat Simple_repeat 2 98 0 333 230 19 14 chr17 23806510 23806729 -65697824 + (TGGA)n Simple_repeat Simple_repeat 1 220 0 456 313 23 0 chr17 23807135 23807263 -65697290 - MIR SINE MIR 0 262 132 854 177 9 0 chr17 23807381 23807623 -65696930 + (TGGA)n Simple_repeat Simple_repeat 1 244 0 1194 70 0 0 chr17 23807819 23807975 -65696578 + AluY SINE Alu 156 311 0 2292 44 4 0 chr17 23807984 23808259 -65696294 + AluY SINE Alu 35 310 -1 346 331 25 38 chr17 23808269 23808426 -65696127 + MIR SINE MIR 18 172 -90 258 362 9 9 chr17 23809448 23809553 -65695000 - MIR SINE MIR 0 262 158 322 297 83 28 chr17 23809723 23809877 -65694676 + MIR3 SINE MIR 1 167 -62 194 328 15 0 chr17 23809946 23810013 -65694540 - MIR3 SINE MIR -53 155 88 204 302 70 31 chr17 23811084 23811213 -65693340 - L2 LINE L2 -6 3307 3174 186 43 0 0 chr17 23811836 23811859 -65692694 + (TCC)n Simple_repeat Simple_repeat 1 23 0 242 240 192 34 chr17 23811928 23812074 -65692479 + L2 LINE L2 2233 2401 -913 253 172 35 0 chr17 23813448 23813505 -65691048 - MIR SINE MIR -62 146 98 229 196 161 0 chr17 23814309 23814365 -65690188 + MIR SINE MIR 107 171 -91 261 289 53 0 chr17 23814370 23814446 -65690107 + Tigger3(Golem) DNA MER2_type 3 82 -2947 * 1750 144 10 0 chr17 23814444 23814749 -65689804 + Tigger3(Golem) DNA MER2_type 2721 3028 -1 204 238 0 0 chr17 23814768 23814810 -65689743 + MIR SINE MIR 221 262 0 210 310 42 49 chr17 23815723 23815865 -65688688 + L2 LINE L2 2849 2989 -324 766 279 105 3 chr17 23817228 23817561 -65686992 + MLT1K LTR MaLR 103 469 -119 186 314 0 0 chr17 23819378 23819429 -65685124 + MIR SINE MIR 100 150 -112 212 351 27 0 chr17 23819446 23819520 -65685033 + L2 LINE L2 3238 3313 0 250 260 0 0 chr17 23820138 23820188 -65684365 + L2 LINE L2 3258 3307 -6 207 100 0 0 chr17 23820281 23820311 -65684242 + (CA)n Simple_repeat Simple_repeat 2 31 0 837 243 6 6 chr17 23820666 23820839 -65683714 + MIR SINE MIR 20 192 -70 566 348 97 13 chr17 23820960 23821351 -65683202 + Charlie4a DNA MER1_type 26 449 -59 274 224 93 19 chr17 23822125 23822239 -65682314 - MIR SINE MIR -64 144 25 203 219 0 0 chr17 23822717 23822758 -65681795 + L3 LINE CR1 1423 1463 -114 570 260 82 82 chr17 23823668 23823999 -65680554 + L2 LINE L2 2812 3142 -171 462 301 58 22 chr17 23824439 23824678 -65679875 + MIR SINE MIR 13 262 0 283 280 0 0 chr17 23824697 23824772 -65679781 + (TCCA)n Simple_repeat Simple_repeat 1 75 0 752 190 0 22 chr17 23824784 23824968 -65679585 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 659 223 0 11 chr17 23825005 23825180 -65679373 + (TCCA)n Simple_repeat Simple_repeat 3 175 0 209 210 16 0 chr17 23825211 23825273 -65679280 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 764 195 8 0 chr17 23825285 23825541 -65679012 + (TCCA)n Simple_repeat Simple_repeat 1 258 0 739 178 11 0 chr17 23825557 23825731 -65678822 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 688 200 12 0 chr17 23825752 23825917 -65678636 + (TCCA)n Simple_repeat Simple_repeat 3 169 0 225 339 0 0 chr17 23825919 23825984 -65678569 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 729 259 202 5 chr17 23826302 23826803 -65677750 - L2 LINE L2 -2 3311 2696 305 294 157 7 chr17 23826856 23827009 -65677544 + L2 LINE L2 3092 3267 -5 224 313 16 0 chr17 23830205 23830269 -65674284 + (CAG)n Simple_repeat Simple_repeat 3 67 0 288 261 14 0 chr17 23831271 23831340 -65673213 + L2 LINE L2 3200 3269 -3 1158 267 99 15 chr17 23832508 23833000 -65671553 + L2 LINE L2 2776 3310 -3 308 262 75 19 chr17 23833053 23833160 -65671393 - MIR SINE MIR -99 163 51 197 247 135 34 chr17 23834889 23834978 -65669575 - L2 LINE L2 -60 3253 3156 2558 45 0 10 chr17 23835861 23836173 -65668380 - AluY SINE Alu -2 309 1 193 200 0 0 chr17 23836986 23837021 -65667532 + MIR SINE MIR 117 151 -111 767 215 80 16 chr17 23837168 23837419 -65667134 - MLT1C LTR MaLR 0 467 201 736 178 178 7 chr17 23837445 23837597 -65666956 - AluJo SINE Alu -18 294 117 2165 121 0 0 chr17 23837597 23837902 -65666651 - AluSc SINE Alu -2 307 3 225 125 42 21 chr17 23837903 23837951 -65666602 - MLT1C LTR MaLR -218 172 124 270 258 26 53 chr17 23839046 23839197 -65665356 + (TCTG)n Simple_repeat Simple_repeat 2 148 0 1083 316 83 16 chr17 23839443 23840019 -65664534 - L1ME1 LINE L1 -9 6157 5543 202 200 0 55 chr17 23840279 23840334 -65664219 + (CCCCAG)n Simple_repeat Simple_repeat 2 53 0 272 154 123 31 chr17 23840499 23840564 -65663989 - MIR SINE MIR -105 157 87 392 230 9 0 chr17 23841207 23841320 -65663233 + Charlie4 DNA MER1_type 1780 1893 -68 373 225 18 45 chr17 23841573 23841684 -65662869 - L2 LINE L2 -15 3298 3191 306 359 44 0 chr17 23841816 23841975 -65662578 + L2 LINE L2 2914 3079 -193 228 242 242 0 chr17 23842483 23842578 -65661975 - MIR SINE MIR -61 147 30 408 302 171 16 chr17 23842871 23843393 -65661160 - L2 LINE L2 -14 3258 2657 193 308 125 14 chr17 23843619 23843766 -65660787 + MIR3 SINE MIR 1 160 -63 392 325 43 27 chr17 23844063 23844251 -65660302 - MIR SINE MIR -25 237 47 312 27 0 0 chr17 23845864 23845901 -65658652 + (CA)n Simple_repeat Simple_repeat 1 37 0 180 0 0 0 chr17 23846119 23846139 -65658414 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 220 279 266 28 chr17 23850032 23850490 -65654063 + L2 LINE L2 2361 2927 -387 2054 112 0 6 chr17 23850592 23850904 -65653649 - MER9 LTR ERVK -201 310 1 237 328 123 8 chr17 23852687 23852809 -65651744 - MIR SINE MIR -60 202 67 2927 127 4 15 chr17 23853353 23853811 -65650742 - L1PA16 LINE L1 -9 6157 5705 191 319 52 52 chr17 23854049 23854165 -65650388 - L2 LINE L2 -15 3298 3183 1097 222 36 64 chr17 23856199 23856463 -65648090 + MLT1E1 LTR MaLR 2 255 -399 1734 127 79 7 chr17 23856463 23856754 -65647799 + AluJb SINE Alu 1 312 0 1097 222 36 64 chr17 23856754 23856849 -65647704 + MLT1E1 LTR MaLR 255 351 -303 207 345 138 0 chr17 23857111 23857198 -65647355 - MIR SINE MIR -8 254 156 21 36 0 0 chr17 23858533 23858561 -65645992 + AT_rich Low_complexity Low_complexity 1 28 0 327 274 0 62 chr17 23860884 23861063 -65643490 + C-rich Low_complexity Low_complexity 5 172 0 304 262 11 78 chr17 23861124 23861315 -65643238 + C-rich Low_complexity Low_complexity 1 178 0 280 207 0 24 chr17 23862182 23862264 -65642289 + (CGGGG)n Simple_repeat Simple_repeat 4 83 0 3641 57 4 2 chr17 23862354 23862811 -65641742 - L1PA6 LINE L1 -5 6149 5692 1014 155 39 6 chr17 23864089 23864270 -65640283 + AluJo SINE Alu 81 267 -45 368 162 10 30 chr17 23864272 23864371 -65640182 + G-rich Low_complexity Low_complexity 2 98 0 232 286 0 0 chr17 23864387 23864450 -65640103 + L1ME LINE L1 322 384 -5686 330 216 68 11 chr17 23864936 23865048 -65639505 - L1MD3 LINE L1 0 8041 7897 1019 324 56 12 chr17 23865395 23865895 -65638658 - MER90 LTR ERV1 -23 591 70 821 156 0 22 chr17 23867194 23867329 -65637224 + FLAM_C SINE Alu 2 133 0 26 30 0 0 chr17 23867383 23867416 -65637137 + AT_rich Low_complexity Low_complexity 1 33 0 1698 169 13 26 chr17 23867606 23867919 -65636634 - AluJo SINE Alu -2 310 2 26 0 0 0 chr17 23868207 23868233 -65636320 + AT_rich Low_complexity Low_complexity 1 26 0 466 202 10 0 chr17 23871610 23871709 -65632844 - MER65C LTR ERV1 0 461 362 273 196 0 0 chr17 23872700 23872756 -65631797 + (CA)n Simple_repeat Simple_repeat 1 56 0 327 290 32 0 chr17 23873072 23873165 -65631388 + MIR SINE MIR 122 217 -45 410 283 233 18 chr17 23873563 23873962 -65630591 + L2 LINE L2 2829 3313 0 251 174 0 0 chr17 23874865 23874911 -65629642 - ORSL DNA AcHobo -20 255 210 897 198 5 0 chr17 23875217 23875663 -65628890 + (TGGA)n Simple_repeat Simple_repeat 1 448 0 234 128 0 0 chr17 23875701 23875740 -65628813 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 244 293 37 0 chr17 23875764 23875846 -65628707 + (TGGA)n Simple_repeat Simple_repeat 2 86 0 1326 56 0 0 chr17 23875903 23876097 -65628456 - AluY SINE Alu 0 314 121 312 224 53 0 chr17 23876101 23876177 -65628376 - ORSL DNA AcHobo -195 80 1 203 264 0 0 chr17 23876270 23876323 -65628230 + L2 LINE L2 2918 2970 -302 294 274 21 11 chr17 23876788 23876883 -65627670 + MIR SINE MIR 58 153 -109 261 0 0 0 chr17 23877340 23877369 -65627184 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 565 300 90 44 chr17 23877370 23877737 -65626816 - L2 LINE L2 -20 3293 2910 277 294 46 18 chr17 23877796 23877905 -65626648 - L2 LINE L2 -497 2817 2706 2182 111 3 0 chr17 23877917 23878223 -65626330 - AluSg SINE Alu -2 308 2 246 193 0 0 chr17 23878231 23878288 -65626265 - L1MB5 LINE L1 0 6174 6118 775 188 0 0 chr17 23878289 23878406 -65626147 + FLAM_C SINE Alu 2 118 -25 930 139 111 0 chr17 23878421 23878593 -65625960 - L1MB5 LINE L1 -43 6131 5941 519 206 92 0 chr17 23878610 23878741 -65625812 + L2 LINE L2 3171 3313 0 886 311 34 6 chr17 23878751 23879076 -65625477 - L1MB5 LINE L1 -228 5946 5613 219 256 69 84 chr17 23880265 23880468 -65624085 + L2 LINE L2 2858 3057 -215 1659 152 0 37 chr17 23880970 23881292 -65623261 + AluJo SINE Alu 3 312 0 215 264 11 23 chr17 23881977 23882064 -65622489 + (TATG)n Simple_repeat Simple_repeat 4 89 0 268 284 4 8 chr17 23882065 23882327 -65622226 + (TG)n Simple_repeat Simple_repeat 1 261 0 486 276 118 8 chr17 23882944 23883274 -65621279 - LTR33A LTR ERVL -3 792 152 284 238 0 0 chr17 23883764 23883827 -65620726 - MIR SINE MIR -110 152 90 575 249 270 18 chr17 23884370 23884700 -65619853 + L2 LINE L2 2898 3310 -3 259 315 36 0 chr17 23884787 23884898 -65619655 + MIR SINE MIR 36 150 -58 213 323 125 0 chr17 23885595 23885691 -65618862 + MIR SINE MIR 29 136 -72 1675 240 83 36 chr17 23885888 23886377 -65618176 + L1MB5 LINE L1 5621 6138 -36 2361 85 0 0 chr17 23886377 23886684 -65617869 + AluSx SINE Alu 1 307 -5 1675 240 83 36 chr17 23886684 23886723 -65617830 + L1MB5 LINE L1 6138 6174 0 506 284 90 35 chr17 23887286 23887487 -65617066 + MIR SINE MIR 40 251 -11 446 275 0 0 chr17 23887719 23887886 -65616667 + (CA)n Simple_repeat Simple_repeat 1 167 0 419 309 15 0 chr17 23888529 23888665 -65615888 + MIR SINE MIR 47 184 -78 481 315 21 0 chr17 23889213 23889356 -65615197 - MIR SINE MIR -22 240 95 423 280 217 6 chr17 23889497 23889672 -65614881 + MIR SINE MIR 39 250 -12 594 293 37 33 chr17 23890072 23890287 -65614266 + MIR SINE MIR 8 223 -39 489 261 114 23 chr17 23890345 23890521 -65614032 + MIR SINE MIR 37 228 -34 2136 108 3 0 chr17 23891250 23891546 -65613007 - AluSq SINE Alu -16 297 1 672 258 110 12 chr17 23891785 23892168 -65612385 + MLT1H LTR MaLR 15 549 0 1978 100 4 0 chr17 23892273 23892544 -65612009 + AluSg SINE Alu 1 272 -38 2293 74 0 7 chr17 23892589 23892885 -65611668 + AluSx SINE Alu 1 294 -18 248 262 37 47 chr17 23893235 23893342 -65611211 + L2 LINE L2 2899 3004 -268 213 338 60 26 chr17 23893416 23893567 -65610986 + L2 LINE L2 3028 3183 -89 247 284 63 47 chr17 23893825 23893952 -65610601 + MIR SINE MIR 33 161 -101 668 201 45 13 chr17 23894063 23894217 -65610336 - MIR SINE MIR -81 181 23 459 0 0 0 chr17 23894985 23895036 -65609517 + (CA)n Simple_repeat Simple_repeat 1 51 0 673 286 106 55 chr17 23895068 23895168 -65609385 + MLT1L LTR MaLR 4 97 -414 753 274 41 0 chr17 23895168 23895365 -65609188 - MER3 DNA MER1_type 0 209 5 673 286 106 55 chr17 23895365 23895797 -65608756 + MLT1L LTR MaLR 97 492 -19 390 340 160 20 chr17 23895835 23896141 -65608412 + L2 LINE L2 2924 3272 0 2292 137 78 12 chr17 23896348 23896756 -65607797 + L1MB3 LINE L1 5747 6181 -2 2668 188 115 28 chr17 23896779 23897387 -65607166 + MER21B LTR ERV1 1 661 -202 4526 128 5 82 chr17 23897387 23898235 -65606318 - LTR39 LTR ERV1 0 783 2 823 139 191 6 chr17 23898237 23898410 -65606143 + MER21B LTR ERV1 659 863 0 2210 75 0 0 chr17 23898862 23899187 -65605366 + AluY SINE Alu 1 325 0 395 271 118 26 chr17 23899448 23899677 -65604876 + L1MC5 LINE L1 5530 5779 -342 2378 74 3 0 chr17 23899715 23900025 -65604528 + AluY SINE Alu 1 311 0 777 293 25 41 chr17 23900035 23900397 -65604156 + L1PB1 LINE L1 5479 5834 -317 * 2068 207 152 26 chr17 23900072 23900652 -65603901 + L1ME1 LINE L1 5509 6161 -5 2237 78 0 0 chr17 23900701 23901011 -65603542 + AluSq SINE Alu 1 310 0 472 294 38 16 chr17 23901057 23901241 -65603312 - MLT1J2 LTR MaLR 0 450 263 1902 138 37 0 chr17 23902384 23902681 -65601872 + AluJb SINE Alu 1 308 -4 253 282 0 42 chr17 23902743 23902814 -65601739 + polypurine Low_complexity Low_complexity 3 70 0 256 314 100 76 chr17 23903237 23904117 -65600436 + HAL1b LINE L1 8 908 -440 1562 167 37 4 chr17 23904505 23904779 -65599774 + AluJo SINE Alu 11 292 -20 196 42 0 0 chr17 23904779 23904803 -65599750 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 291 283 65 0 chr17 23904808 23904946 -65599607 + L1MC5 LINE L1 5846 5992 -1816 1921 248 51 6 chr17 23904947 23905469 -65599084 - MLT1H1 LTR MaLR 0 555 12 2233 253 106 86 chr17 23905517 23905693 -65598860 + L1MC5 LINE L1 6041 6212 -1749 2221 103 3 0 chr17 23905693 23905985 -65598568 - AluSg SINE Alu -17 293 1 2233 253 106 86 chr17 23905985 23906349 -65598204 + L1MC5 LINE L1 6212 6567 -1394 1845 173 7 3 chr17 23906349 23906656 -65597897 + AluSx SINE Alu 1 308 -4 2233 253 106 86 chr17 23906656 23907961 -65596592 + L1MC5 LINE L1 6567 7917 -44 337 280 62 83 chr17 23908165 23908358 -65596195 + L1ME LINE L1 5528 5716 -405 349 218 13 0 chr17 23909112 23909190 -65595363 + MLT1J LTR MaLR 98 176 -335 233 220 51 0 chr17 23909270 23909329 -65595224 + MLT1J LTR MaLR 413 474 -37 2133 77 3 7 chr17 23909331 23909642 -65594911 - AluSx SINE Alu 0 310 1 611 252 81 13 chr17 23909733 23909967 -65594586 - LTR16A1 LTR ERVL 0 457 208 246 270 0 14 chr17 23910439 23910513 -65594040 - MIR SINE MIR -76 132 60 466 212 71 0 chr17 23910779 23910892 -65593661 - LTR16C LTR ERVL -74 417 297 410 294 149 0 chr17 23911380 23911574 -65592979 - MIR SINE MIR -9 253 31 253 344 74 0 chr17 23911659 23911781 -65592772 + L2 LINE L2 2710 2840 -474 23 54 0 0 chr17 23911816 23911853 -65592700 + AT_rich Low_complexity Low_complexity 1 37 0 190 294 29 15 chr17 23912032 23912100 -65592453 + L2 LINE L2 3224 3292 -21 191 240 80 48 chr17 23912431 23912556 -65591997 + MIR3 SINE MIR 3 131 -77 278 305 29 0 chr17 23912802 23912907 -65591646 + L3 LINE CR1 1427 1534 -43 1179 179 54 68 chr17 23913006 23913057 -65591496 - MSTD LTR MaLR 0 396 346 1687 160 48 10 chr17 23913057 23913351 -65591202 - AluJo SINE Alu -7 305 1 1179 179 54 68 chr17 23913351 23913652 -65590901 - MSTD LTR MaLR -50 346 49 2207 111 0 9 chr17 23914497 23914812 -65589741 - AluSx SINE Alu 0 312 1 195 341 73 0 chr17 23915679 23915761 -65588792 - L2 LINE L2 0 3313 3226 515 268 61 48 chr17 23915770 23916001 -65588552 - L2 LINE L2 -193 3120 2887 325 243 91 44 chr17 23916570 23916723 -65587830 + MIR SINE MIR 31 189 -19 27 0 0 0 chr17 23917071 23917098 -65587455 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr17 23917161 23917189 -65587364 + AT_rich Low_complexity Low_complexity 1 28 0 498 234 154 37 chr17 23918290 23918504 -65586049 + L2 LINE L2 2815 3053 -219 2242 70 7 20 chr17 23919363 23919662 -65584891 - AluSg SINE Alu -15 295 1 421 356 31 22 chr17 23919700 23919922 -65584631 - L1M4 LINE L1 -3472 2674 2451 284 240 13 0 chr17 23920432 23920507 -65584046 + Charlie8 DNA MER1_type 97 172 -2245 405 0 0 0 chr17 23920643 23920688 -65583865 + (CA)n Simple_repeat Simple_repeat 2 46 0 2132 121 3 13 chr17 23921986 23922301 -65582252 + AluSp SINE Alu 1 312 -1 22 35 0 0 chr17 23922350 23922379 -65582174 + AT_rich Low_complexity Low_complexity 1 29 0 2004 118 31 0 chr17 23922391 23922680 -65581873 + AluSg SINE Alu 1 298 -12 39 50 0 0 chr17 23922705 23922765 -65581788 + AT_rich Low_complexity Low_complexity 1 60 0 796 255 166 9 chr17 23922946 23923382 -65581171 + MLT1H1 LTR MaLR 7 555 0 22 35 0 0 chr17 23923673 23923702 -65580851 + AT_rich Low_complexity Low_complexity 1 29 0 2230 103 7 0 chr17 23923846 23924138 -65580415 + AluSx SINE Alu 1 294 -18 2238 109 3 0 chr17 23924138 23924449 -65580104 + AluSx SINE Alu 1 312 0 1235 119 0 0 chr17 23924449 23924625 -65579928 + AluSg/x SINE Alu 133 308 -2 182 257 195 0 chr17 23924697 23924810 -65579743 + L2 LINE L2 2813 2947 -367 1900 232 102 43 chr17 23924951 23925211 -65579342 + MER21B LTR ERV1 17 260 -603 1839 168 0 0 chr17 23925211 23925497 -65579056 + AluJo SINE Alu 5 290 -22 1900 232 102 43 chr17 23925497 23925510 -65579043 + MER21B LTR ERV1 260 271 -592 2037 127 14 0 chr17 23925510 23925801 -65578752 + AluSx SINE Alu 1 295 -17 1900 232 102 43 chr17 23925801 23926219 -65578334 + MER21B LTR ERV1 271 750 -113 390 276 103 37 chr17 23928596 23928810 -65575743 + L1ME2 LINE L1 5926 6153 -11 228 35 0 0 chr17 23930210 23930239 -65574314 + (CCCCAG)n Simple_repeat Simple_repeat 6 34 0 272 376 0 0 chr17 23931055 23931148 -65573405 - MIR SINE MIR -71 191 99 405 319 57 0 chr17 23931844 23931985 -65572568 + MIR SINE MIR 48 196 -66 428 308 111 6 chr17 23932067 23932239 -65572314 - L2 LINE L2 -2 3311 3122 2133 116 3 0 chr17 23932288 23932581 -65571972 - AluSq SINE Alu -19 294 1 1874 143 10 7 chr17 23932581 23932881 -65571672 - AluJb SINE Alu -10 302 1 180 356 58 11 chr17 23932975 23933062 -65571491 - MER5A DNA MER1_type -49 140 50 297 309 146 8 chr17 23934044 23934167 -65570386 + MIR3 SINE MIR 4 143 -65 246 32 0 0 chr17 23935341 23935372 -65569181 + (CAG)n Simple_repeat Simple_repeat 1 31 0 384 308 56 2 chr17 23935553 23935722 -65568831 - MIR SINE MIR -52 210 30 244 331 55 69 chr17 23935976 23936121 -65568432 + MIR SINE MIR 77 219 -43 292 328 73 10 chr17 23937018 23937210 -65567343 + L2 LINE L2 2821 3024 -248 469 237 141 0 chr17 23937339 23937474 -65567079 + MIR SINE MIR 22 175 -87 492 212 0 147 chr17 23939177 23939347 -65565206 - MIR SINE MIR -7 255 111 876 158 0 0 chr17 23939487 23939620 -65564933 + AluJo/FLAM SINE Alu 1 133 -169 1448 144 98 46 chr17 23939621 23939906 -65564647 + AluJb SINE Alu 13 312 0 382 362 14 14 chr17 23940442 23940580 -65563973 + MIR SINE MIR 81 218 -44 809 93 8 0 chr17 23940895 23941024 -65563529 + (TATTG)n Simple_repeat Simple_repeat 2 131 0 2237 66 3 7 chr17 23941026 23941313 -65563240 - AluY SINE Alu -25 286 1 1550 144 38 15 chr17 23941316 23941579 -65562974 - AluJb SINE Alu -17 295 27 458 279 109 0 chr17 23943268 23943415 -65561138 - MIR SINE MIR -53 209 47 365 254 18 35 chr17 23943648 23943762 -65560791 - MIR SINE MIR -138 124 13 384 225 111 1 chr17 23945178 23945299 -65559254 + MIR SINE MIR 30 162 -46 371 302 33 70 chr17 23946069 23946284 -65558269 - MIR SINE MIR -19 243 37 303 130 0 0 chr17 23947463 23947517 -65557036 + (CGG)n Simple_repeat Simple_repeat 3 56 0 415 323 110 69 chr17 23951030 23951448 -65553105 - L1MC3 LINE L1 -1556 6229 5795 2296 79 7 0 chr17 23951580 23951883 -65552670 + AluY SINE Alu 1 305 -6 2030 100 0 7 chr17 23951926 23952216 -65552337 + AluY SINE Alu 1 288 -23 415 242 0 0 chr17 23952244 23952368 -65552185 + L1 LINE L1 5199 5322 -824 1156 125 0 0 chr17 23953166 23953326 -65551227 - AluSx SINE Alu -147 165 6 314 244 84 103 chr17 23953402 23953615 -65550938 + L1M4 LINE L1 4159 4367 -1779 1847 81 0 0 chr17 23954100 23954336 -65550217 + AluY SINE Alu 2 237 -74 510 199 7 157 chr17 23954490 23954553 -65550000 - L1M4 LINE L1 -949 5197 5126 2145 126 0 7 chr17 23954553 23954847 -65549706 - AluSx SINE Alu -20 292 1 510 199 7 157 chr17 23954847 23954963 -65549590 - L1M4 LINE L1 -1020 5126 5080 2376 94 0 22 chr17 23954963 23955281 -65549272 - AluY SINE Alu 0 311 1 510 199 7 157 chr17 23955281 23955406 -65549147 - L1M4 LINE L1 -1066 5080 4938 2372 87 3 0 chr17 23955476 23955765 -65548788 - AluSx SINE Alu -22 290 1 616 140 0 11 chr17 23955765 23955858 -65548695 - AluSq/x SINE Alu -172 141 50 483 253 11 34 chr17 23956082 23956260 -65548293 + L1MC4 LINE L1 7865 8038 -4 277 270 159 24 chr17 23956543 23956669 -65547884 - MIR3 SINE MIR -51 157 15 302 0 0 26 chr17 23956931 23956970 -65547583 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 311 151 38 0 chr17 23957006 23957059 -65547494 - MER66A LTR ERV1 -142 336 282 2134 126 24 0 chr17 23957291 23957585 -65546968 - AluSq SINE Alu -12 301 1 311 355 36 6 chr17 23957604 23957770 -65546783 - L1ME LINE L1 -440 5681 5511 2374 68 3 59 chr17 23957902 23958225 -65546328 - AluSc SINE Alu -4 305 1 1627 188 49 0 chr17 23958437 23958724 -65545829 + AluJo SINE Alu 3 303 -9 185 331 54 54 chr17 23958880 23959010 -65545543 - L2 LINE L2 -1 3312 3183 776 150 7 54 chr17 23959320 23959467 -65545086 + FLAM_C SINE Alu 2 141 -2 1983 130 32 0 chr17 23959544 23959828 -65544725 + AluSx SINE Alu 1 293 -19 970 104 0 0 chr17 23959966 23960091 -65544462 + AluSp SINE Alu 1 125 -188 893 164 77 5 chr17 23960096 23960291 -65544262 - MER41-int LTR ERV1 -2998 2948 2740 * 897 132 68 19 chr17 23960289 23960510 -65544043 - MER41-int LTR ERV1 -2443 2572 1839 * 1215 216 25 17 chr17 23960509 23960814 -65543739 - MER41-int LTR ERV1 -3592 2354 1235 880 85 78 0 chr17 23961843 23961972 -65542581 + MER85 DNA T2_type 1 139 0 237 282 18 18 chr17 23962147 23962257 -65542296 + GA-rich Low_complexity Low_complexity 2 111 0 393 264 65 87 chr17 23963445 23964096 -65540457 - HSREP522 Satellite telomeric -99 636 1 490 263 66 84 chr17 23965207 23965527 -65539026 + L1MC4a LINE L1 6278 6591 -1217 1967 152 7 0 chr17 23965547 23965837 -65538716 + AluSx SINE Alu 3 294 -18 2332 227 106 90 chr17 23965973 23967157 -65537396 + L1MC5 LINE L1 6715 7917 -44 372 205 13 0 chr17 23968308 23968386 -65536167 + MLT1J LTR MaLR 98 176 -335 239 220 51 0 chr17 23968466 23968525 -65536028 + MLT1J LTR MaLR 413 474 -37 2214 67 7 7 chr17 23968527 23968833 -65535720 - AluSx SINE Alu 0 306 1 597 239 94 30 chr17 23968924 23969158 -65535395 - LTR16A1 LTR ERVL 0 457 209 261 267 0 13 chr17 23969633 23969708 -65534845 - MIR SINE MIR -131 131 58 496 212 152 24 chr17 23969925 23970090 -65534463 - LTR16C LTR ERVL -9 482 297 393 271 115 36 chr17 23970580 23970772 -65533781 - MIR SINE MIR -9 253 47 254 336 74 0 chr17 23970860 23970982 -65533571 + L2 LINE L2 2710 2840 -474 23 54 0 0 chr17 23971017 23971054 -65533499 + AT_rich Low_complexity Low_complexity 1 37 0 200 290 29 14 chr17 23971233 23971302 -65533251 + L2 LINE L2 3224 3293 -20 202 224 80 48 chr17 23971636 23971761 -65532792 + MIR3 SINE MIR 3 131 -77 275 295 29 0 chr17 23972007 23972112 -65532441 + L3 LINE CR1 1427 1534 -43 1154 182 57 68 chr17 23972211 23972262 -65532291 - MSTD LTR MaLR 0 396 346 1715 165 47 10 chr17 23972262 23972559 -65531994 - AluJo SINE Alu -4 308 1 1154 182 57 68 chr17 23972559 23972858 -65531695 - MSTD LTR MaLR -50 346 50 2283 111 0 9 chr17 23973722 23974037 -65530516 - AluSx SINE Alu 0 312 1 228 67 0 0 chr17 23974863 23974893 -65529660 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 522 268 83 38 chr17 23974910 23975226 -65529327 - L2 LINE L2 -5 3308 2887 340 302 86 14 chr17 23975796 23975935 -65528618 + MIR SINE MIR 31 179 -83 22 0 0 0 chr17 23976297 23976319 -65528234 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17 23976382 23976410 -65528143 + AT_rich Low_complexity Low_complexity 1 28 0 519 222 195 9 chr17 23977514 23977735 -65526818 + L2 LINE L2 2794 3053 -219 2254 87 7 20 chr17 23978594 23978892 -65525661 - AluSg SINE Alu -16 294 1 363 332 41 25 chr17 23978936 23979132 -65525421 - L1M4 LINE L1 -3478 2668 2470 273 240 13 0 chr17 23979663 23979738 -65524815 + Charlie8 DNA MER1_type 97 172 -2245 297 0 0 0 chr17 23979877 23979910 -65524643 + (CA)n Simple_repeat Simple_repeat 2 34 0 2105 132 3 13 chr17 23981212 23981516 -65523037 + AluSp SINE Alu 1 301 -12 22 35 0 0 chr17 23981554 23981583 -65522970 + AT_rich Low_complexity Low_complexity 1 29 0 2097 125 28 0 chr17 23981595 23981884 -65522669 + AluSg SINE Alu 1 297 -13 180 109 36 18 chr17 23981914 23981969 -65522584 + (TATAA)n Simple_repeat Simple_repeat 1 56 0 765 231 193 64 chr17 23982112 23982583 -65521970 + MLT1H1 LTR MaLR 19 555 0 2295 119 7 0 chr17 23983045 23983347 -65521206 + AluSx SINE Alu 1 304 -8 2285 116 0 0 chr17 23983347 23983649 -65520904 + AluSx SINE Alu 1 302 -10 1276 125 0 0 chr17 23983651 23983827 -65520726 + AluSg/x SINE Alu 133 308 -2 1940 229 100 49 chr17 23984153 23984417 -65520136 + MER21B LTR ERV1 17 266 -597 1816 170 3 0 chr17 23984417 23984700 -65519853 + AluJo SINE Alu 7 290 -22 1940 229 100 49 chr17 23984700 23984713 -65519840 + MER21B LTR ERV1 266 277 -586 2123 128 14 0 chr17 23984713 23985001 -65519552 + AluSx SINE Alu 1 292 -20 1940 229 100 49 chr17 23985001 23985420 -65519133 + MER21B LTR ERV1 277 750 -113 183 320 27 0 chr17 23987031 23987106 -65517447 - MIR SINE MIR -107 155 79 22 0 0 0 chr17 23988425 23988447 -65516106 + AT_rich Low_complexity Low_complexity 1 22 0 452 348 61 7 chr17 23988459 23988742 -65515811 + L2 LINE L2 2748 3047 -266 2420 212 40 7 chr17 23988803 23989406 -65515147 - L1MB7 LINE L1 0 6184 5562 3871 268 58 18 chr17 23989422 23991089 -65513464 - L1MB7 LINE L1 -729 5445 3715 1559 167 11 8 chr17 23991203 23991467 -65513086 - AluSq SINE Alu -48 265 1 2372 97 3 0 chr17 23991570 23991878 -65512675 - AluSp SINE Alu 0 313 5 410 261 108 25 chr17 23991941 23992098 -65512455 + MIR SINE MIR 34 203 -59 232 244 8 94 chr17 23992446 23992573 -65511980 - L1P LINE L1 -1130 5016 4901 227 233 148 79 chr17 23992541 23993022 -65511531 - L1M4 LINE L1 -1214 4932 4419 * 719 281 123 37 chr17 23993090 23993663 -65510890 - L2 LINE L2 -104 3209 2584 312 70 0 0 chr17 23993690 23993733 -65510820 + (TG)n Simple_repeat Simple_repeat 2 44 0 219 312 13 26 chr17 23994137 23994214 -65510339 + MIR SINE MIR 184 259 -3 2056 147 0 16 chr17 23994357 23994533 -65510020 - AluSx SINE Alu -3 309 139 2305 113 3 0 chr17 23994533 23994835 -65509718 - AluSg SINE Alu -7 303 1 2056 147 0 16 chr17 23994835 23994972 -65509581 - AluSx SINE Alu -173 139 1 1983 157 3 0 chr17 23995162 23995456 -65509097 - AluSx SINE Alu -17 295 1 2294 99 3 22 chr17 23996242 23996556 -65507997 - AluSc SINE Alu -1 308 1 2251 103 3 0 chr17 23997995 23998285 -65506268 - AluSp SINE Alu -22 291 1 2201 97 0 20 chr17 23998352 23998650 -65505903 - AluY SINE Alu -19 292 1 272 244 39 26 chr17 23998652 23998730 -65505823 + L1MC4a LINE L1 5857 5935 -1873 182 120 0 0 chr17 23998989 23999014 -65505539 - MER5B DNA MER1_type -130 48 24 242 325 84 19 chr17 23999079 23999233 -65505320 + MIR3 SINE MIR 41 204 -4 29 0 0 0 chr17 23999352 23999381 -65505172 + AT_rich Low_complexity Low_complexity 1 29 0 1964 115 45 7 chr17 23999407 23999694 -65504859 - AluSg SINE Alu -12 298 1 1610 178 3 66 chr17 23999713 23999876 -65504677 - AluJo SINE Alu -12 300 165 2470 88 0 0 chr17 23999876 24000183 -65504370 - AluY SINE Alu -4 307 1 1610 178 3 66 chr17 24000183 24000339 -65504214 - AluJo SINE Alu -147 165 1 22 0 0 0 chr17 24000409 24000431 -65504122 + AT_rich Low_complexity Low_complexity 1 22 0 26 101 0 0 chr17 24000550 24000639 -65503914 + AT_rich Low_complexity Low_complexity 1 89 0 28 29 0 0 chr17 24000739 24000774 -65503779 + AT_rich Low_complexity Low_complexity 1 35 0 435 332 53 68 chr17 24000874 24001214 -65503339 + L1M4 LINE L1 4499 4833 -1313 2294 98 7 0 chr17 24001231 24001527 -65503026 - AluSx SINE Alu -3 309 12 217 228 0 53 chr17 24001782 24001839 -65502714 - L2 LINE L2 -2 3270 3217 246 347 124 44 chr17 24002667 24002941 -65501612 - L2 LINE L2 -1805 1509 1214 521 224 67 0 chr17 24002942 24003107 -65501446 - L1M4 LINE L1 -2044 4102 3927 1180 69 0 14 chr17 24003195 24003340 -65501213 + AluSq/x SINE Alu 1 143 -170 657 209 29 3 chr17 24004144 24004298 -65500255 + MIR SINE MIR 25 181 -63 250 291 63 47 chr17 24004409 24004536 -65500017 - MIR SINE MIR -101 161 33 219 244 41 174 chr17 24004794 24005134 -65499419 - L2 LINE L2 -89 3183 2889 2312 94 0 7 chr17 24005476 24005773 -65498780 - AluSx SINE Alu -17 295 1 2123 89 4 0 chr17 24005818 24006089 -65498464 - AluSg SINE Alu -38 272 1 372 196 147 0 chr17 24006194 24006296 -65498257 - MLT1H LTR MaLR 0 549 433 657 231 97 21 chr17 24006321 24006559 -65497994 - MLT1H LTR MaLR -221 328 73 2244 112 3 0 chr17 24006816 24007111 -65497442 + AluSq SINE Alu 1 296 -17 494 264 118 1 chr17 24007842 24007995 -65496558 - MIR SINE MIR -34 228 60 614 282 57 19 chr17 24008078 24008287 -65496266 - MIR SINE MIR -33 229 13 437 280 217 6 chr17 24008692 24008867 -65495686 - MIR SINE MIR -12 250 39 485 315 21 0 chr17 24009008 24009151 -65495402 + MIR SINE MIR 95 240 -22 183 238 270 0 chr17 24009623 24009686 -65494867 - MIR SINE MIR -118 144 65 452 267 35 41 chr17 24009699 24009871 -65494682 - MIR SINE MIR -78 184 14 446 275 0 0 chr17 24010474 24010641 -65493912 + (TG)n Simple_repeat Simple_repeat 1 167 0 524 256 99 37 chr17 24010882 24011073 -65493480 - MIR SINE MIR -20 242 40 1575 236 83 36 chr17 24011635 24011674 -65492879 - L1MB5 LINE L1 0 6174 6138 2412 89 7 0 chr17 24011674 24011978 -65492575 - AluSx SINE Alu -6 306 1 1575 236 83 36 chr17 24011978 24012467 -65492086 - L1MB5 LINE L1 -36 6138 5621 226 276 89 106 chr17 24012664 24012787 -65491766 - MIR SINE MIR -72 136 16 241 315 36 0 chr17 24013457 24013568 -65490985 - MIR SINE MIR -58 150 36 758 259 232 18 chr17 24013655 24013995 -65490558 - L2 LINE L2 -3 3310 2898 291 238 0 0 chr17 24014538 24014601 -65489952 + MIR SINE MIR 90 152 -110 373 273 118 8 chr17 24015091 24015421 -65489132 + LTR33A LTR ERVL 152 792 -3 268 283 4 8 chr17 24016038 24016298 -65488255 + (CA)n Simple_repeat Simple_repeat 1 259 0 215 264 11 23 chr17 24016299 24016386 -65488167 + (CATA)n Simple_repeat Simple_repeat 4 89 0 1804 145 0 35 chr17 24017071 24017381 -65487172 - AluJo SINE Alu 0 312 14 348 179 36 12 chr17 24020394 24020478 -65484075 - MER65C LTR ERV1 0 461 376 5864 96 26 15 chr17 24020581 24020770 -65483783 + L1PA14 LINE L1 4815 5000 -1161 2192 162 0 23 chr17 24020770 24021115 -65483438 + MER1B DNA MER1_type 1 337 0 5864 96 26 15 chr17 24021115 24022260 -65482293 + L1PA14 LINE L1 5000 6152 -9 886 226 21 8 chr17 24022267 24022502 -65482051 - MER65C LTR ERV1 -124 337 100 3586 235 85 41 chr17 24023660 24023873 -65480680 - L1M4 LINE L1 -5140 1402 1200 1834 156 14 3 chr17 24023873 24024161 -65480392 + AluSx SINE Alu 1 291 -21 3586 235 85 41 chr17 24024161 24024509 -65480044 - L1M4 LINE L1 -5342 1200 869 1733 161 38 0 chr17 24024509 24024776 -65479777 + AluJo SINE Alu 1 277 -35 208 0 62 0 chr17 24024782 24024814 -65479739 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 3586 235 85 41 chr17 24024814 24025566 -65478987 - L1M4 LINE L1 -5677 865 23 459 281 140 9 chr17 24025576 24025797 -65478756 + Charlie2 DNA MER1_type 69 318 -2544 1435 200 61 47 chr17 24025816 24026310 -65478243 + Charlie2 DNA MER1_type 1866 2366 -496 297 274 112 17 chr17 24027325 24027504 -65477049 + MLT1J2 LTR MaLR 21 216 -234 403 296 47 52 chr17 24027924 24028010 -65476543 - MIR SINE MIR -22 240 155 2149 132 0 13 chr17 24028010 24028321 -65476232 - AluJo SINE Alu -5 307 1 403 296 47 52 chr17 24028321 24028467 -65476086 - MIR SINE MIR -107 155 9 1546 178 0 19 chr17 24028785 24029044 -65475509 - AluJo SINE Alu -54 258 5 914 165 14 104 chr17 24029782 24029994 -65474559 - AluJo SINE Alu -117 195 3 392 291 89 28 chr17 24030012 24030225 -65474328 + MIR SINE MIR 1 226 -36 266 274 12 0 chr17 24030352 24030436 -65474117 + L1ME3A LINE L1 6081 6165 -5 2088 102 0 42 chr17 24031564 24031897 -65472656 + L1PA13 LINE L1 5845 6163 0 603 249 22 11 chr17 24031899 24032084 -65472469 - MER65C LTR ERV1 -133 328 142 14678 115 35 7 chr17 24032763 24034760 -65469793 + Tigger1 DNA MER2_type 42 2114 -304 1936 150 22 29 chr17 24034760 24035074 -65469479 + AluJo SINE Alu 1 312 0 14678 115 35 7 chr17 24035074 24035388 -65469165 + Tigger1 DNA MER2_type 2114 2418 0 2199 163 71 19 chr17 24035937 24036348 -65468205 - MSTB1 LTR MaLR 0 432 1 1301 140 0 5 chr17 24036827 24037020 -65467533 + AluJo SINE Alu 121 312 0 1757 125 84 6 chr17 24037020 24037331 -65467222 + Tigger1 DNA MER2_type 2083 2417 -1 2197 163 71 19 chr17 24037882 24038293 -65466260 - MSTB1 LTR MaLR 0 432 1 447 305 144 11 chr17 24039892 24040246 -65464307 - MLT1H1 LTR MaLR -121 434 34 431 331 43 23 chr17 24040755 24041314 -65463239 - L1M4 LINE L1 -839 5307 4735 219 69 0 0 chr17 24041329 24041358 -65463195 + (TG)n Simple_repeat Simple_repeat 2 30 0 1077 258 103 64 chr17 24043131 24043701 -65460852 - L1M4 LINE L1 -849 5297 4698 1810 165 50 0 chr17 24043701 24043998 -65460555 - AluSx SINE Alu 0 312 1 1077 258 103 64 chr17 24043998 24044056 -65460497 - L1M4 LINE L1 -1448 4698 4644 269 20 80 0 chr17 24044755 24044805 -65459748 + (TTTG)n Simple_repeat Simple_repeat 4 57 0 184 271 0 71 chr17 24045074 24045144 -65459409 - L2 LINE L2 -1916 1398 1334 2841 168 4 15 chr17 24046874 24047416 -65457137 + L1MB4 LINE L1 5389 5924 -256 2693 152 19 2 chr17 24047431 24047853 -65456700 - MSTB1 LTR MaLR -3 429 1 257 146 0 0 chr17 24047855 24047896 -65456657 + L1M4 LINE L1 3534 3574 -2572 258 216 10 72 chr17 24047903 24048000 -65456553 - MLT1E1 LTR MaLR -278 376 286 * 276 244 100 0 chr17 24047979 24048069 -65456484 - MLT1E1 LTR MaLR -487 167 69 1470 214 127 37 chr17 24048609 24049072 -65455481 - MLT1D LTR MaLR 0 505 1 1132 263 30 0 chr17 24049236 24049536 -65455017 - ERVL LTR ERVL -1122 4642 4334 1282 158 54 15 chr17 24049552 24049811 -65454742 - MLT1B LTR MaLR -121 269 1 240 184 0 0 chr17 24050269 24050318 -65454235 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 235 116 23 23 chr17 24050363 24050406 -65454147 - L2 LINE L2 -75 3238 3196 756 199 102 42 chr17 24050406 24050622 -65453931 - MER58B DNA MER1_type 0 341 113 950 112 0 0 chr17 24050887 24051012 -65453541 + FLAM_C SINE Alu 1 125 -8 233 56 0 28 chr17 24052184 24052220 -65452333 + (CA)n Simple_repeat Simple_repeat 2 36 0 282 309 20 26 chr17 24053374 24053526 -65451027 + (TCTG)n Simple_repeat Simple_repeat 2 152 0 887 298 98 24 chr17 24053771 24054344 -65450209 - L1ME1 LINE L1 -9 6157 5543 180 0 0 0 chr17 24054603 24054623 -65449930 + (CCCCAG)n Simple_repeat Simple_repeat 2 21 0 283 154 123 31 chr17 24054821 24054886 -65449667 - MIR SINE MIR -105 157 87 424 221 9 0 chr17 24055529 24055642 -65448911 + Charlie4 DNA MER1_type 1780 1893 -68 304 241 18 54 chr17 24055895 24056007 -65448546 - L2 LINE L2 -15 3298 3191 267 350 50 0 chr17 24056140 24056280 -65448273 + L2 LINE L2 2915 3061 -211 199 237 247 0 chr17 24056809 24056902 -65447651 - MIR SINE MIR -63 145 30 255 300 76 28 chr17 24057377 24057716 -65446837 - L2 LINE L2 -297 3016 2657 337 301 45 23 chr17 24058436 24058569 -65445984 - MIR SINE MIR -80 182 47 2197 132 0 0 chr17 24063203 24063499 -65441054 - AluSq SINE Alu -2 311 16 189 351 27 9 chr17 24064380 24064491 -65440062 - MIR SINE MIR -117 145 33 325 257 0 0 chr17 24064787 24064857 -65439696 - MIR SINE MIR -142 120 51 344 301 56 14 chr17 24065948 24066091 -65438462 - MIR3 SINE MIR -4 204 56 562 254 88 7 chr17 24066733 24066910 -65437643 - MIR SINE MIR -9 253 64 237 242 66 22 chr17 24067347 24067438 -65437115 - MIR3 SINE MIR -52 156 62 569 260 106 7 chr17 24067956 24068287 -65436266 + LTR16C LTR ERVL 88 474 -17 228 86 0 0 chr17 24068405 24068440 -65436113 + (TCC)n Simple_repeat Simple_repeat 1 35 0 344 239 17 17 chr17 24068730 24068978 -65435575 + (TGGA)n Simple_repeat Simple_repeat 1 248 0 446 320 23 0 chr17 24069384 24069512 -65435041 - MIR SINE MIR 0 262 132 844 166 6 12 chr17 24069635 24069980 -65434573 + (TGGA)n Simple_repeat Simple_repeat 1 343 0 778 191 5 5 chr17 24069992 24070214 -65434339 + (TGGA)n Simple_repeat Simple_repeat 1 222 0 579 209 11 6 chr17 24070228 24070405 -65434148 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 830 184 6 0 chr17 24070427 24070606 -65433947 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 429 219 126 0 chr17 24071047 24071166 -65433387 + MIR3 SINE MIR 45 178 -30 306 125 0 0 chr17 24071310 24071358 -65433195 + (TGGA)n Simple_repeat Simple_repeat 3 50 0 253 234 31 0 chr17 24071537 24071601 -65432952 - MIR SINE MIR -112 150 85 256 179 9 104 chr17 24073117 24073223 -65431330 + MIR SINE MIR 27 122 -86 672 264 24 0 chr17 24073836 24074003 -65430550 + MIR SINE MIR 32 202 -60 3773 125 22 16 chr17 24074650 24074969 -65429584 + L1PA14 LINE L1 4687 5003 -1158 2094 154 0 23 chr17 24074969 24075314 -65429239 + MER1B DNA MER1_type 1 337 0 3773 125 22 16 chr17 24075314 24076186 -65428367 + L1PA14 LINE L1 5003 5882 -279 268 224 0 17 chr17 24076330 24076388 -65428165 + L2 LINE L2 3193 3249 -64 21 0 0 0 chr17 24076422 24076443 -65428110 + AT_rich Low_complexity Low_complexity 1 21 0 2236 117 0 3 chr17 24076953 24077252 -65427301 - AluSg SINE Alu -12 298 1 361 281 141 36 chr17 24078923 24079154 -65425399 - L1ME LINE L1 -477 5685 5426 312 271 47 28 chr17 24079155 24079262 -65425291 - L1ME LINE L1 -2405 5403 5295 960 106 0 0 chr17 24079388 24079511 -65425042 - AluSg/x SINE Alu -36 276 154 3620 188 53 6 chr17 24079518 24080588 -65423965 - L1MB7 LINE L1 -76 6108 4997 442 301 84 55 chr17 24080680 24081145 -65423408 - L1MEc LINE L1 -4373 1756 1254 550 265 118 19 chr17 24081167 24081480 -65423073 - L1MEc LINE L1 -4880 1239 896 256 289 94 62 chr17 24081613 24081741 -65422812 + MIR SINE MIR 112 243 -19 369 330 126 15 chr17 24081743 24082004 -65422549 + L1M4 LINE L1 4376 4665 -1481 2133 108 10 7 chr17 24082007 24082322 -65422231 + AluY SINE Alu 1 311 0 454 241 71 14 chr17 24082941 24083082 -65421471 - MIR SINE MIR -99 163 15 505 262 136 16 chr17 24083134 24083325 -65421228 + MIR SINE MIR 48 261 -1 423 234 0 0 chr17 24084189 24084313 -65420240 + (TCCA)n Simple_repeat Simple_repeat 3 126 0 267 293 0 0 chr17 24084737 24084812 -65419741 + MIR SINE MIR 19 93 -115 310 203 0 0 chr17 24084986 24085045 -65419508 - MIR SINE MIR -89 119 61 328 248 20 94 chr17 24085059 24085208 -65419345 + MIR3 SINE MIR 44 181 -27 211 346 167 12 chr17 24086561 24086801 -65417752 - L2 LINE L2 -459 2855 2579 609 213 0 0 chr17 24087470 24087639 -65416914 + (ATG)n Simple_repeat Simple_repeat 2 170 0 566 220 6 0 chr17 24087685 24087862 -65416691 + (ATG)n Simple_repeat Simple_repeat 3 180 0 219 106 45 45 chr17 24087864 24087930 -65416623 + (ATGGTG)n Simple_repeat Simple_repeat 1 66 0 424 253 86 34 chr17 24087939 24087982 -65416571 + L1ME LINE L1 5575 5614 -507 584 246 0 0 chr17 24087982 24088108 -65416445 - FLAM_A SINE Alu -7 126 1 424 253 86 34 chr17 24088108 24088297 -65416256 + L1ME LINE L1 5614 5819 -302 467 269 35 7 chr17 24088407 24088548 -65416005 + L2 LINE L2 3167 3311 -2 313 259 165 81 chr17 24088700 24088936 -65415617 + MLT1L LTR MaLR 135 390 -225 283 332 35 10 chr17 24090335 24090511 -65414042 - MIR SINE MIR -50 212 33 234 0 0 0 chr17 24093567 24093593 -65410960 + (TA)n Simple_repeat Simple_repeat 1 26 0 495 48 0 0 chr17 24094972 24095034 -65409519 + (GA)n Simple_repeat Simple_repeat 2 63 0 243 0 0 0 chr17 24095044 24095071 -65409482 + (A)n Simple_repeat Simple_repeat 1 27 0 907 287 71 2 chr17 24096385 24096849 -65407704 - L1M4 LINE L1 -3404 2742 2247 38 61 0 0 chr17 24096850 24096916 -65407637 + AT_rich Low_complexity Low_complexity 1 66 0 832 160 183 6 chr17 24097058 24097227 -65407326 - AluSg/x SINE Alu -27 282 84 1007 194 94 43 chr17 24097227 24097556 -65406997 + MER119 DNA MER1_type 75 420 -163 1997 244 66 47 chr17 24097557 24098614 -65405939 - L1ME1 LINE L1 -79 6087 4997 257 314 39 0 chr17 24098639 24098741 -65405812 - MLT1K LTR MaLR -104 484 379 959 152 52 9 chr17 24099857 24100067 -65404486 + MER33 DNA MER1_type 1 219 -105 1099 244 155 40 chr17 24100084 24100555 -65403998 + L1MC4 LINE L1 7278 7802 -240 593 294 58 17 chr17 24100559 24100852 -65403701 + HERVL LTR ERVL 4077 4381 -1273 362 178 0 74 chr17 24101338 24101501 -65403052 + (ATGGTG)n Simple_repeat Simple_repeat 1 151 0 374 227 64 27 chr17 24101892 24102002 -65402551 - MIR SINE MIR -13 249 136 2527 174 16 4 chr17 24102004 24102493 -65402060 - L1MB2 LINE L1 -7 6164 5670 204 290 32 0 chr17 24102803 24102865 -65401688 - L2 LINE L2 -1 3312 3249 613 294 64 5 chr17 24103008 24103226 -65401327 - MIR SINE MIR -1 261 31 227 323 156 40 chr17 24104158 24104536 -65400017 + L2 LINE L2 2826 3247 -25 373 290 19 0 chr17 24104783 24104890 -65399663 - L2 LINE L2 -18 3254 3146 2248 119 0 0 chr17 24105589 24105899 -65398654 - AluSg SINE Alu 0 310 1 276 288 42 8 chr17 24106193 24106311 -65398242 - MER94 DNA DNA -2 132 11 185 216 0 39 chr17 24106316 24106367 -65398186 + MIR SINE MIR 103 151 -111 1681 217 82 16 chr17 24106409 24106898 -65397655 - MER90 LTR ERV1 0 614 94 559 271 126 14 chr17 24107668 24107875 -65396678 + MIR SINE MIR 30 259 -3 190 279 115 0 chr17 24108292 24108353 -65396200 - MIR3 SINE MIR -133 75 8 346 221 48 77 chr17 24108401 24108505 -65396048 - MIR SINE MIR -70 192 92 233 405 9 0 chr17 24108719 24108830 -65395723 + L2 LINE L2 2748 2859 -455 207 0 0 0 chr17 24109026 24109049 -65395504 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1889 120 0 27 chr17 24109071 24109363 -65395190 - AluSq SINE Alu -19 294 11 1933 121 17 10 chr17 24109478 24109775 -65394778 - AluSq SINE Alu -14 299 1 915 148 7 0 chr17 24109776 24109918 -65394635 - AluY SINE Alu -168 143 1 1189 159 120 33 chr17 24110938 24111239 -65393314 - SST1 Satellite centromeric 0 1563 1237 854 163 13 0 chr17 24111244 24111397 -65393156 + AluSg/x SINE Alu 155 309 -1 6848 162 16 17 chr17 24111463 24112878 -65391675 - SST1 Satellite centromeric -150 1413 1 1733 293 57 36 chr17 24113570 24114388 -65390165 - SST1 Satellite centromeric -471 1092 245 345 75 0 0 chr17 24114388 24114441 -65390112 + (CCCCAG)n Simple_repeat Simple_repeat 5 57 0 1733 293 57 36 chr17 24114441 24114692 -65389861 - SST1 Satellite centromeric -1318 245 1 217 259 25 0 chr17 24115435 24115516 -65389037 + (CAGA)n Simple_repeat Simple_repeat 2 84 0 * 239 173 19 0 chr17 24115473 24115525 -65389028 + GA-rich Low_complexity Low_complexity 2 54 0 219 103 0 0 chr17 24115532 24115571 -65388982 + (CA)n Simple_repeat Simple_repeat 2 40 0 2387 292 51 44 chr17 24115607 24124128 -65380425 - SST1 Satellite centromeric -45 8580 1 272 293 10 11 chr17 24124374 24124477 -65380076 + MIR SINE MIR 49 144 -64 360 311 56 12 chr17 24125327 24125488 -65379065 - Charlie4a DNA MER1_type -61 447 280 247 261 58 0 chr17 24126120 24126189 -65378364 - MIR SINE MIR -60 148 76 479 195 8 0 chr17 24127252 24127370 -65377183 + (TGGA)n Simple_repeat Simple_repeat 3 121 0 879 124 147 23 chr17 24127380 24127557 -65376996 + AluSg/x SINE Alu 114 312 0 598 217 132 0 chr17 24127611 24127763 -65376790 - MIR SINE MIR -26 236 65 226 356 0 0 chr17 24128209 24128296 -65376257 - MIR SINE MIR -115 147 61 199 240 40 0 chr17 24128427 24128477 -65376076 - MIR SINE MIR -102 160 109 468 191 145 33 chr17 24128891 24129043 -65375510 + MIR SINE MIR 21 189 -73 533 292 13 5 chr17 24129045 24129230 -65375323 + MIR SINE MIR 20 205 -57 321 26 0 0 chr17 24130038 24130076 -65374477 + (TG)n Simple_repeat Simple_repeat 2 39 0 639 265 93 0 chr17 24130469 24130673 -65373880 + LTR16C LTR ERVL 255 477 -14 280 290 149 0 chr17 24130821 24130928 -65373625 - MIR SINE MIR -28 234 112 229 149 64 0 chr17 24131604 24131651 -65372902 - L2 LINE L2 -217 3055 3006 355 311 0 10 chr17 24131726 24131829 -65372724 + MIR SINE MIR 43 144 -64 228 339 131 0 chr17 24132399 24132529 -65372024 + L2 LINE L2 3125 3271 -1 390 294 24 35 chr17 24132684 24132854 -65371699 - Charlie4a DNA MER1_type -61 447 280 267 141 0 0 chr17 24133531 24133579 -65370974 - MIR SINE MIR -60 148 100 587 242 30 0 chr17 24134888 24135020 -65369533 - MIR SINE MIR -95 167 32 194 311 104 47 chr17 24135286 24135392 -65369161 - MIR SINE MIR -145 117 6 265 203 38 38 chr17 24135625 24135704 -65368849 - MIR SINE MIR -76 132 54 181 255 0 20 chr17 24136440 24136491 -65368062 - MIR SINE MIR -60 148 99 203 321 62 0 chr17 24136962 24137043 -65367510 + MIR SINE MIR 84 169 -93 303 284 53 0 chr17 24137256 24137351 -65367202 + MIR SINE MIR 85 184 -78 192 333 11 33 chr17 24137419 24137509 -65367044 + MIR SINE MIR 49 136 -126 457 219 126 0 chr17 24137674 24137793 -65366760 - MIR3 SINE MIR -30 178 45 436 216 75 52 chr17 24137989 24138123 -65366430 - L1M4 LINE L1 -2984 3162 3026 506 286 118 31 chr17 24138140 24138395 -65366158 + MER77 LTR ERV1 323 599 -6 1731 208 18 0 chr17 24139046 24139387 -65365166 - MER7A DNA MER2_type 0 346 2 26 0 0 0 chr17 24139445 24139471 -65365082 + AT_rich Low_complexity Low_complexity 1 26 0 206 282 24 24 chr17 24139664 24139749 -65364804 + (TATG)n Simple_repeat Simple_repeat 3 87 0 301 298 107 115 chr17 24140525 24141378 -65363175 - L1MC5 LINE L1 -242 7719 6874 336 286 78 108 chr17 24140632 24140964 -65363589 + HAL1b LINE L1 1018 1339 -9 21 36 0 0 chr17 24142656 24142684 -65361869 + AT_rich Low_complexity Low_complexity 1 28 0 303 258 10 166 chr17 24143547 24143842 -65360711 + L1MCa LINE L1 1652 1900 -4526 1193 362 123 14 chr17 24144578 24145534 -65359019 + L1MEd LINE L1 506 1606 -4704 271 255 32 11 chr17 24145767 24145861 -65358692 + MIR SINE MIR 48 143 -119 189 332 58 10 chr17 24145860 24145985 -65358568 + MIR SINE MIR 46 176 -69 * 554 310 107 9 chr17 24146679 24146895 -65357658 + MIR SINE MIR 20 256 -6 520 329 230 16 chr17 24147068 24147451 -65357102 + L2 LINE L2 2848 3312 -1 395 332 47 23 chr17 24147639 24147853 -65356700 - L2 LINE L2 -177 3095 2877 215 267 216 17 chr17 24148708 24148824 -65355729 + L2 LINE L2 3174 3312 -1 1097 273 103 7 chr17 24148864 24149011 -65355542 - L2 LINE L2 -1 3312 3181 1530 162 63 25 chr17 24149011 24149295 -65355258 + AluJb SINE Alu 1 295 -17 1097 273 103 7 chr17 24149295 24149564 -65354989 - L2 LINE L2 -132 3181 2856 318 325 98 35 chr17 24150077 24150332 -65354221 + L2 LINE L2 2917 3187 -85 330 248 228 0 chr17 24150630 24150731 -65353822 + L2 LINE L2 3189 3312 -1 317 271 66 41 chr17 24150737 24150859 -65353694 - MIR SINE MIR -85 177 53 307 314 51 22 chr17 24151217 24151354 -65353199 - MIR SINE MIR -80 182 42 270 314 112 21 chr17 24151363 24151551 -65353002 - MIR SINE MIR -24 238 34 186 352 155 7 chr17 24151651 24151793 -65352760 - L3 LINE CR1 -31 1546 1384 2454 71 0 3 chr17 24151798 24152106 -65352447 - AluSg SINE Alu -3 307 1 423 245 107 127 chr17 24152159 24152514 -65352039 - L2 LINE L2 0 3313 2966 362 297 79 60 chr17 24152561 24152719 -65351834 + HAL1 LINE L1 1 155 -2352 1791 171 0 0 chr17 24152719 24153011 -65351542 - AluJo SINE Alu -20 292 1 362 297 79 60 chr17 24153011 24153233 -65351320 + HAL1 LINE L1 155 388 -2119 349 192 26 13 chr17 24153228 24153306 -65351247 + HAL1 LINE L1 1304 1382 -1125 * 595 272 70 32 chr17 24153289 24153605 -65350948 + HAL1 LINE L1 2022 2349 -158 1592 80 0 55 chr17 24155007 24155245 -65349308 + AluSx SINE Alu 1 225 -87 321 276 47 39 chr17 24155541 24155668 -65348885 + L1ME4a LINE L1 5979 6106 -15 30 27 0 0 chr17 24155708 24155745 -65348808 + AT_rich Low_complexity Low_complexity 1 37 0 191 310 84 0 chr17 24155764 24155835 -65348718 + L2 LINE L2 2991 3067 -205 1178 139 11 5 chr17 24156228 24156415 -65348138 - AluSx SINE Alu -124 188 1 376 89 56 22 chr17 24156415 24156505 -65348048 - Charlie5 DNA MER1_type -77 2535 2443 1634 78 13 13 chr17 24156505 24156735 -65347818 + L1PA6 LINE L1 5922 6151 -3 2209 125 0 0 chr17 24156760 24157072 -65347481 - AluSx SINE Alu 0 312 1 256 45 0 45 chr17 24157084 24157128 -65347425 + (TCCCC)n Simple_repeat Simple_repeat 5 46 0 1216 104 16 6 chr17 24157140 24157323 -65347230 - AluSg/x SINE Alu -25 285 101 2308 102 0 3 chr17 24157702 24158015 -65346538 - AluSx SINE Alu 0 312 1 240 213 0 0 chr17 24158169 24158216 -65346337 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 289 240 130 0 chr17 24158218 24158318 -65346235 - L2 LINE L2 0 3313 3201 1774 145 31 3 chr17 24158349 24158638 -65345915 + AluJb SINE Alu 1 297 -15 658 111 154 17 chr17 24158777 24158894 -65345659 + FLAM_C SINE Alu 1 133 0 2022 90 25 0 chr17 24158915 24159238 -65345315 - AluSp SINE Alu 0 330 1 241 303 0 0 chr17 24159469 24159545 -65345008 + C-rich Low_complexity Low_complexity 1 76 0 423 196 0 0 chr17 24159558 24159691 -65344862 + C-rich Low_complexity Low_complexity 1 133 0 225 139 0 0 chr17 24159830 24159873 -65344680 + (TC)n Simple_repeat Simple_repeat 1 43 0 1796 146 0 10 chr17 24159928 24160259 -65344294 - AluSx SINE Alu 0 328 1 1414 182 128 0 chr17 24160261 24160519 -65344034 - AluJb SINE Alu -11 291 1 455 235 83 78 chr17 24160521 24160751 -65343802 + MER102b DNA MER1_type 88 318 -23 2232 73 10 3 chr17 24160787 24161088 -65343465 - AluSq SINE Alu -10 303 1 276 354 101 25 chr17 24161214 24161412 -65343141 + MIR SINE MIR 15 227 -35 347 109 36 0 chr17 24161754 24161809 -65342744 - Alu SINE Alu -246 57 1 1612 251 37 9 chr17 24162092 24162547 -65342006 - L1MB5 LINE L1 0 6174 5707 1097 251 117 3 chr17 24163032 24163366 -65341187 + MLT1B LTR MaLR 1 372 -18 315 131 10 172 chr17 24163690 24163789 -65340764 - MLT1B LTR MaLR -307 83 1 919 162 7 0 chr17 24163815 24163969 -65340584 + FRAM SINE Alu 2 156 -20 924 248 133 0 chr17 24164413 24164699 -65339854 + MLT1G LTR MaLR 1 324 -266 447 233 60 45 chr17 24164695 24164828 -65339725 + MLT1G LTR MaLR 454 588 -2 * 554 239 0 0 chr17 24165363 24165472 -65339081 + MER81 DNA DNA 2 110 -4 676 241 100 26 chr17 24166128 24166379 -65338174 - MLT1G LTR MaLR -288 242 1 442 298 85 0 chr17 24167246 24167387 -65337166 + MIR SINE MIR 2 154 -108 250 317 69 57 chr17 24167531 24167713 -65336840 + MIR SINE MIR 6 193 -49 482 214 22 116 chr17 24168163 24168270 -65336283 + L1ME2 LINE L1 5214 5289 -877 2307 83 26 0 chr17 24168270 24168572 -65335981 + AluSg SINE Alu 1 310 0 482 214 22 116 chr17 24168572 24168703 -65335850 + L1ME2 LINE L1 5289 5431 -735 768 65 19 9 chr17 24168811 24168919 -65335634 + AluSp/q SINE Alu 188 296 -17 192 77 0 0 chr17 24168958 24168984 -65335569 + (T)n Simple_repeat Simple_repeat 1 26 0 1779 52 4 21 chr17 24168984 24169217 -65335336 - AluY SINE Alu -82 229 1 2852 102 11 9 chr17 24169217 24169656 -65334897 + MER4D LTR ERV1 204 643 -260 1272 136 15 157 chr17 24169686 24170024 -65334529 + AluJo SINE Alu 11 300 -12 1569 76 84 12 chr17 24170026 24170275 -65334278 + MER4D LTR ERV1 637 903 0 688 252 106 57 chr17 24170275 24170377 -65334176 + L1ME2 LINE L1 5792 5887 -277 1960 138 0 0 chr17 24170377 24170673 -65333880 + AluSx SINE Alu 1 296 -16 688 252 106 57 chr17 24170673 24170852 -65333701 + L1ME2 LINE L1 5887 6087 -77 281 283 98 0 chr17 24171026 24171118 -65333435 + MIR3 SINE MIR 82 182 -26 306 242 26 108 chr17 24171264 24171458 -65333095 + MIR SINE MIR 79 256 -6 25 0 0 0 chr17 24171568 24171593 -65332960 + GC_rich Low_complexity Low_complexity 1 25 0 340 299 62 67 chr17 24171887 24172081 -65332472 - L1MDa LINE L1 -3965 2575 2383 514 266 34 17 chr17 24172493 24172670 -65331883 + MIR SINE MIR 72 251 -11 1928 110 20 14 chr17 24172731 24173023 -65331530 - AluSx SINE Alu -18 294 1 257 308 89 7 chr17 24173135 24173281 -65331272 - MIR3 SINE MIR -16 192 35 270 189 38 42 chr17 24173408 24173506 -65331047 - MIR SINE MIR -58 150 81 216 135 0 0 chr17 24173736 24173773 -65330780 + (T)n Simple_repeat Simple_repeat 1 37 0 405 321 70 5 chr17 24174298 24174485 -65330068 - MIR SINE MIR -14 248 50 * 717 266 258 16 chr17 24174477 24175037 -65329516 - L2 LINE L2 -4 3309 2605 190 349 16 0 chr17 24175176 24175239 -65329314 - MIR SINE MIR -113 149 86 190 104 21 21 chr17 24175339 24175387 -65329166 + (TGGGGG)n Simple_repeat Simple_repeat 1 48 0 544 163 0 22 chr17 24175402 24175586 -65328967 + G-rich Low_complexity Low_complexity 1 180 0 186 222 0 0 chr17 24175610 24175664 -65328889 + G-rich Low_complexity Low_complexity 1 54 0 2010 130 7 3 chr17 24175781 24176088 -65328465 + AluSg SINE Alu 1 308 -2 353 327 60 24 chr17 24176100 24176351 -65328202 + L1MC4 LINE L1 7623 7882 -160 736 183 0 0 chr17 24176393 24176508 -65328045 - FLAM_C SINE Alu -18 115 1 2361 86 0 0 chr17 24176533 24176837 -65327716 + AluY SINE Alu 1 304 -7 237 180 49 33 chr17 24177061 24177122 -65327431 - MIR3 SINE MIR -46 162 101 317 269 55 0 chr17 24177248 24177372 -65327181 - MIR SINE MIR -63 145 43 237 256 144 0 chr17 24177390 24177480 -65327073 + MIR SINE MIR 16 118 -144 307 369 65 28 chr17 24177780 24177994 -65326559 + L2 LINE L2 2940 3161 -111 269 326 39 31 chr17 24178072 24178201 -65326352 + MIR SINE MIR 21 150 -112 2700 209 46 24 chr17 24178262 24178918 -65325635 - L1ME1 LINE L1 -5 6161 5488 2199 67 46 0 chr17 24178918 24179201 -65325352 - AluSg SINE Alu -14 296 1 2700 209 46 24 chr17 24179201 24179220 -65325333 - L1ME1 LINE L1 -678 5488 5471 1218 136 4 78 chr17 24179221 24179400 -65325153 - AluJo SINE Alu -3 309 151 2349 68 3 0 chr17 24179400 24179694 -65324859 - AluSx SINE Alu -17 295 1 1218 136 4 78 chr17 24179694 24179756 -65324797 - AluJo SINE Alu -161 151 86 608 227 31 43 chr17 24179756 24180013 -65324540 - L1ME1 LINE L1 -670 5492 5254 523 188 0 0 chr17 24180177 24180257 -65324296 + AluS SINE Alu 13 92 -220 2340 64 0 0 chr17 24180508 24180803 -65323750 - AluY SINE Alu -16 295 1 869 173 53 62 chr17 24180947 24181139 -65323414 - L1MD3 LINE L1 0 7995 7804 2262 100 0 13 chr17 24181139 24181448 -65323105 - AluSg SINE Alu -5 305 1 869 173 53 62 chr17 24181448 24181481 -65323072 - L1MD3 LINE L1 -191 7804 7772 1005 259 174 32 chr17 24181501 24181937 -65322616 + L1MC4a LINE L1 5436 5933 -1875 317 262 179 0 chr17 24182393 24182477 -65322076 + LTR33A LTR ERVL 59 157 -366 198 266 62 0 chr17 24182768 24182832 -65321721 - MIR SINE MIR -66 142 75 436 328 129 34 chr17 24182842 24183011 -65321542 + L2 LINE L2 2863 3015 -298 1765 183 0 0 chr17 24183011 24183306 -65321247 - AluJo SINE Alu -17 295 1 436 328 129 34 chr17 24183306 24183548 -65321005 + L2 LINE L2 3015 3313 0 376 296 61 109 chr17 24183962 24184118 -65320435 + MIR SINE MIR 9 152 -110 2013 112 7 0 chr17 24184118 24184403 -65320150 - AluSx SINE Alu -25 287 1 376 296 61 109 chr17 24184403 24184476 -65320077 + MIR SINE MIR 152 227 -35 241 272 97 10 chr17 24184481 24184584 -65319969 - MIR SINE MIR -58 204 93 523 92 0 13 chr17 24184813 24184889 -65319664 + Alu SINE Alu 1 75 -243 297 189 32 84 chr17 24185432 24185527 -65319026 + MIR SINE MIR 27 116 -146 184 284 91 11 chr17 24185641 24185729 -65318824 + L2 LINE L2 2634 2728 -586 882 44 0 26 chr17 24185799 24185913 -65318640 - L1PA6 LINE L1 0 6154 6044 1607 171 4 0 chr17 24185913 24186177 -65318376 - AluJo SINE Alu -20 292 28 277 306 45 9 chr17 24186181 24186292 -65318261 + L1ME1 LINE L1 6043 6157 -9 2063 145 0 0 chr17 24186293 24186596 -65317957 - AluSx SINE Alu -9 303 1 706 80 97 0 chr17 24186752 24186865 -65317688 - MER41B LTR ERV1 0 635 512 2175 102 0 7 chr17 24186865 24187169 -65317384 + AluSg SINE Alu 1 302 -8 1309 113 0 10 chr17 24187491 24187685 -65316868 + AluSg/x SINE Alu 121 312 0 2903 126 38 34 chr17 24187685 24188015 -65316538 - MER41B LTR ERV1 -126 509 175 2205 66 3 20 chr17 24188015 24188316 -65316237 - AluY SINE Alu -15 296 1 2903 126 38 34 chr17 24188316 24188492 -65316061 - MER41B LTR ERV1 -460 175 1 781 247 207 31 chr17 24188517 24188708 -65315845 + L2 LINE L2 2764 2920 -393 2221 98 3 0 chr17 24188708 24189005 -65315548 - AluSx SINE Alu -14 298 1 781 247 207 31 chr17 24189005 24189287 -65315266 + L2 LINE L2 2920 3308 -5 224 226 0 0 chr17 24189687 24189740 -65314813 - L2 LINE L2 -323 2949 2897 2227 55 21 7 chr17 24189748 24190038 -65314515 + AluY SINE Alu 6 299 -12 919 254 101 10 chr17 24190313 24190679 -65313874 + L1ME LINE L1 5237 5629 -535 793 239 17 11 chr17 24190681 24190857 -65313696 + AluJo SINE Alu 2 178 -134 544 172 11 0 chr17 24190851 24190944 -65313609 + AluJo/FRAM SINE Alu 137 230 -82 * 180 186 47 23 chr17 24191055 24191098 -65313455 - MIR SINE MIR -55 153 110 192 253 169 0 chr17 24191792 24191875 -65312678 - MIR SINE MIR -71 137 41 185 285 63 32 chr17 24192106 24192264 -65312289 - L2 LINE L2 -253 3060 2898 220 206 82 27 chr17 24193127 24193200 -65311353 + MIR SINE MIR 108 184 -78 547 258 101 0 chr17 24193650 24193851 -65310702 + L2 LINE L2 2767 2984 -329 918 181 0 7 chr17 24193973 24194128 -65310425 - AluJo/FRAM SINE Alu -22 290 137 2321 100 0 0 chr17 24194128 24194437 -65310116 - AluSq SINE Alu -4 309 1 398 308 31 25 chr17 24194438 24194597 -65309956 + L2 LINE L2 3151 3310 -3 281 223 157 57 chr17 24194968 24195137 -65309416 + MIR SINE MIR 11 195 -58 567 203 250 0 chr17 24195291 24195553 -65309000 + L2 LINE L2 2676 3016 -297 372 291 111 41 chr17 24195554 24195726 -65308827 + L2 LINE L2 3130 3313 0 205 267 0 0 chr17 24195726 24195771 -65308782 + (TGGA)n Simple_repeat Simple_repeat 2 46 0 520 250 16 0 chr17 24196200 24196324 -65308229 - MIR SINE MIR -32 230 105 235 296 0 0 chr17 24199184 24199255 -65305298 + C-rich Low_complexity Low_complexity 1 71 0 259 229 288 0 chr17 24199850 24199968 -65304585 + MIR3 SINE MIR 32 183 -25 1972 114 35 0 chr17 24200041 24200330 -65304223 + AluSx SINE Alu 12 310 -2 2021 137 12 19 chr17 24200700 24201022 -65303531 - 7SLRNA srpRNA srpRNA 0 320 1 182 222 22 0 chr17 24201078 24201123 -65303430 - L2 LINE L2 -2 3270 3225 422 54 0 0 chr17 24201139 24201195 -65303358 - Alu SINE Alu -10 302 247 2449 64 0 3 chr17 24201482 24201793 -65302760 - AluY SINE Alu -1 310 1 483 216 48 128 chr17 24202327 24202414 -65302139 + MER113 DNA MER1_type? 62 154 -367 1857 158 0 0 chr17 24202414 24202706 -65301847 + AluJo SINE Alu 1 292 -20 483 216 48 128 chr17 24202706 24202868 -65301685 + MER113 DNA MER1_type? 154 291 -230 185 354 0 15 chr17 24203231 24203296 -65301257 + MIR SINE MIR 30 93 -115 377 241 23 0 chr17 24203299 24203386 -65301167 - L2 LINE L2 0 3313 3225 365 316 87 20 chr17 24203414 24203610 -65300943 - L2 LINE L2 -61 3252 3044 630 274 43 11 chr17 24203624 24203810 -65300743 + MLT1L LTR MaLR 347 538 -77 601 281 177 3 chr17 24203867 24204196 -65300357 - L2 LINE L2 -297 3016 2633 337 285 43 126 chr17 24204355 24204523 -65300030 + L2 LINE L2 2543 2681 -633 767 177 0 0 chr17 24204523 24204653 -65299900 - FLAM_C SINE Alu 0 133 4 337 285 43 126 chr17 24204653 24204761 -65299792 + L2 LINE L2 2681 2796 -518 308 310 29 29 chr17 24204762 24204933 -65299620 - MLT1J2 LTR MaLR 0 450 280 2344 99 0 0 chr17 24206037 24206330 -65298223 - AluSc SINE Alu -16 293 1 318 327 88 56 chr17 24206569 24206820 -65297733 - MLT1J2 LTR MaLR -1 449 191 248 329 120 6 chr17 24206958 24207125 -65297428 + L2 LINE L2 2807 2992 -280 299 207 0 0 chr17 24207127 24207185 -65297368 + (CCCA)n Simple_repeat Simple_repeat 3 60 0 839 204 8 4 chr17 24207186 24207723 -65296830 + (TCCA)n Simple_repeat Simple_repeat 1 539 0 236 286 0 0 chr17 24207724 24207780 -65296773 + (CCCA)n Simple_repeat Simple_repeat 2 57 0 803 192 6 0 chr17 24207781 24207958 -65296595 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 1480 241 48 38 chr17 24207972 24208449 -65296104 - L2 LINE L2 -3 3310 2829 259 237 21 0 chr17 24209242 24209335 -65295218 + (TCCA)n Simple_repeat Simple_repeat 4 98 0 247 294 72 33 chr17 24209735 24209915 -65294638 + LTR33A LTR ERVL 335 521 -2 381 348 24 20 chr17 24210223 24210488 -65294065 + ERVL LTR ERVL 384 628 -5026 209 289 99 28 chr17 24210777 24210899 -65293654 + MIR SINE MIR 77 212 -50 2357 79 3 3 chr17 24210899 24211189 -65293364 + AluSx SINE Alu 1 290 -22 209 289 99 28 chr17 24211189 24211208 -65293345 + MIR SINE MIR 212 228 -34 1342 83 22 0 chr17 24212810 24212990 -65291563 + AluSg/x SINE Alu 115 298 -14 21 36 0 0 chr17 24214317 24214345 -65290208 + GC_rich Low_complexity Low_complexity 1 28 0 1133 155 5 10 chr17 24217132 24217332 -65287221 - MER3 DNA MER1_type -10 199 1 473 223 121 18 chr17 24218751 24218852 -65285701 + MER3 DNA MER1_type 1 90 -119 1892 160 3 7 chr17 24218852 24219158 -65285395 - AluJb SINE Alu -7 305 1 473 223 121 18 chr17 24219158 24219222 -65285331 + MER3 DNA MER1_type 90 183 -26 309 283 38 9 chr17 24219255 24219402 -65285151 - MIR SINE MIR -66 142 34 201 322 167 0 chr17 24219831 24219921 -65284632 - L2 LINE L2 -9 3304 3200 360 256 93 8 chr17 24220322 24220349 -65284204 - L1ME4a LINE L1 -2 6119 6096 2602 57 0 0 chr17 24220349 24220648 -65283905 + AluY SINE Alu 1 299 -12 360 256 93 8 chr17 24220648 24220736 -65283817 - L1ME4a LINE L1 -25 6096 5990 2327 101 3 0 chr17 24220736 24221034 -65283519 - AluSq SINE Alu -14 299 1 360 256 93 8 chr17 24221034 24221046 -65283507 - L1ME4a LINE L1 -131 5990 5980 2074 133 7 0 chr17 24221107 24221392 -65283161 - AluSx SINE Alu -25 287 1 1177 242 77 3 chr17 24221455 24221781 -65282772 + L1MB8 LINE L1 5825 6174 -4 1983 136 58 0 chr17 24221820 24222115 -65282438 + AluSq SINE Alu 1 312 -1 1951 159 20 3 chr17 24222123 24222425 -65282128 + AluSg SINE Alu 1 307 -3 3540 140 31 25 chr17 24222425 24223109 -65281444 + L1MB3 LINE L1 5496 6183 0 2394 107 3 0 chr17 24224182 24224490 -65280063 - AluSx SINE Alu -3 309 1 201 74 0 0 chr17 24224492 24224519 -65280034 + (T)n Simple_repeat Simple_repeat 1 27 0 210 71 0 0 chr17 24224663 24224691 -65279862 + (A)n Simple_repeat Simple_repeat 1 28 0 1893 132 73 0 chr17 24224918 24225207 -65279346 - AluSx SINE Alu -2 310 1 1795 122 20 56 chr17 24226709 24227013 -65277540 + AluJb SINE Alu 1 293 -19 2349 88 3 25 chr17 24229284 24229601 -65274952 - AluSg SINE Alu 0 310 1 1289 86 77 32 chr17 24231254 24231474 -65273079 + MER30 DNA MER1_type 1 230 0 1872 151 14 0 chr17 24231605 24231908 -65272645 - AluSx SINE Alu 0 307 1 1696 184 3 27 chr17 24232881 24233180 -65271373 + AluJb SINE Alu 1 292 -20 1704 122 118 0 chr17 24233180 24233442 -65271111 - AluSx SINE Alu -19 293 1 473 241 72 24 chr17 24234399 24234565 -65269988 - MER113 DNA MER1_type? -147 374 201 1025 113 19 50 chr17 24234781 24234941 -65269612 + AluSp SINE Alu 135 289 -24 2154 91 53 0 chr17 24234943 24235228 -65269325 + AluY SINE Alu 1 300 -11 392 113 0 0 chr17 24235232 24235285 -65269268 + Alu SINE Alu 1 53 -250 207 69 0 0 chr17 24235291 24235320 -65269233 + (A)n Simple_repeat Simple_repeat 1 29 0 2378 90 0 13 chr17 24236093 24236405 -65268148 + AluSg SINE Alu 1 308 -2 1936 162 7 0 chr17 24238459 24238755 -65265798 - AluJo SINE Alu -14 298 1 490 168 126 0 chr17 24240048 24240143 -65264410 - FLAM_A SINE Alu -35 107 1 797 144 97 166 chr17 24240167 24240487 -65264066 + L1MC4 LINE L1 7744 8041 -1 2352 60 3 26 chr17 24240491 24240827 -65263726 + AluY SINE Alu 1 311 0 441 226 0 0 chr17 24240933 24241079 -65263474 + G-rich Low_complexity Low_complexity 1 146 0 316 264 62 98 chr17 24241292 24241402 -65263151 - L1ME4a LINE L1 -49 6072 5960 2413 81 0 28 chr17 24241402 24241722 -65262831 - AluY SINE Alu 0 311 1 594 222 6 53 chr17 24241722 24241893 -65262660 - FRAM SINE Alu -2 164 2 316 264 62 98 chr17 24241893 24241974 -65262579 - L1ME4a LINE L1 -159 5962 5887 198 428 14 0 chr17 24242788 24242926 -65261627 - MIR SINE MIR -33 229 90 326 191 53 38 chr17 24243045 24243078 -65261475 - L1MC4 LINE L1 -31 8011 7980 2324 112 0 0 chr17 24243078 24243374 -65261179 + AluSq SINE Alu 1 296 -17 326 191 53 38 chr17 24243374 24243471 -65261082 - L1MC4 LINE L1 -62 7980 7879 215 331 24 48 chr17 24243539 24243663 -65260890 - MIR SINE MIR -98 164 44 296 283 140 49 chr17 24243927 24244239 -65260314 + L1MC4a LINE L1 5671 6015 -106 456 310 38 0 chr17 24244321 24244479 -65260074 - MIR SINE MIR -81 181 18 6325 196 108 68 chr17 24245550 24246377 -65258176 + L1M3 LINE L1 3044 3837 -2343 840 101 0 36 chr17 24246377 24246515 -65258038 + AluJo/FLAM SINE Alu 1 133 -169 2402 87 3 7 chr17 24246517 24246826 -65257727 + AluSp SINE Alu 1 308 -5 6325 196 108 68 chr17 24246826 24247378 -65257175 + L1M3 LINE L1 3837 4366 -1814 928 174 214 86 chr17 24247378 24247680 -65256873 + MSTD LTR MaLR 1 356 -40 1700 213 3 0 chr17 24247680 24247990 -65256563 + AluJo SINE Alu 1 311 -1 928 174 214 86 chr17 24247990 24248038 -65256515 + MSTD LTR MaLR 356 396 0 6325 196 108 68 chr17 24248038 24248693 -65255860 + L1M3 LINE L1 4366 4994 -1186 2265 119 0 3 chr17 24248693 24248996 -65255557 + AluSc SINE Alu 1 302 -7 2424 88 3 3 chr17 24248999 24249307 -65255246 + AluSp SINE Alu 1 308 -5 6325 196 108 68 chr17 24249307 24249452 -65255101 + L1M3 LINE L1 4995 5133 -1047 2099 130 3 13 chr17 24249452 24249751 -65254802 - AluSx SINE Alu -16 296 1 6325 196 108 68 chr17 24249751 24249854 -65254699 + L1M3 LINE L1 5133 5440 -740 1527 158 19 31 chr17 24249854 24250113 -65254440 + AluJo SINE Alu 42 297 -15 2185 105 21 0 chr17 24250123 24250408 -65254145 + AluSx SINE Alu 11 301 -11 266 226 0 0 chr17 24251657 24251719 -65252834 - MLT1K LTR MaLR -13 575 514 190 196 29 214 chr17 24252234 24252407 -65252146 + MIR SINE MIR 95 235 -27 1897 179 3 3 chr17 24252455 24252746 -65251807 - AluJo SINE Alu -21 291 1 1891 163 3 3 chr17 24252777 24253060 -65251493 + AluJo SINE Alu 1 283 -29 1722 139 53 7 chr17 24253227 24253508 -65251045 + AluJb SINE Alu 1 294 -18 1886 154 37 0 chr17 24253559 24253857 -65250696 - AluJb SINE Alu -3 309 1 186 224 35 17 chr17 24256191 24256249 -65248304 + MIR SINE MIR 174 232 -30 196 250 91 23 chr17 24256346 24256434 -65248119 + L2 LINE L2 3153 3246 -26 313 270 11 11 chr17 24256905 24256994 -65247559 + Charlie8 DNA MER1_type 34 122 -2295 231 36 0 0 chr17 24257048 24257076 -65247477 + (CACCC)n Simple_repeat Simple_repeat 4 31 0 279 318 73 11 chr17 24259916 24260095 -65244458 + MIR SINE MIR 8 197 -65 1981 172 0 0 chr17 24260843 24261146 -65243407 + AluJb SINE Alu 1 303 -9 2147 95 49 0 chr17 24263577 24263862 -65240691 - AluSg SINE Alu -11 299 1 1644 158 68 4 chr17 24263891 24264170 -65240383 + AluJo SINE Alu 4 300 -12 284 212 15 30 chr17 24264495 24264561 -65239992 - MARNA DNA Mariner -387 199 135 384 266 46 17 chr17 24264670 24264843 -65239710 - L2 LINE L2 0 3313 3136 1955 142 0 10 chr17 24265185 24265481 -65239072 + AluJo SINE Alu 6 298 -14 1605 169 0 0 chr17 24265523 24265765 -65238788 + AluJb SINE Alu 1 242 -70 2371 83 6 13 chr17 24266284 24266598 -65237955 - AluSx SINE Alu 0 312 1 22 0 0 0 chr17 24266635 24266657 -65237896 + AT_rich Low_complexity Low_complexity 1 22 0 645 253 93 27 chr17 24267905 24268130 -65236423 - L1M4c LINE L1 -4594 1790 1551 5729 151 44 2 chr17 24268132 24269124 -65235429 - L1MC1 LINE L1 0 6613 5573 2247 96 0 26 chr17 24269126 24269438 -65235115 - AluSg SINE Alu -6 304 1 1048 111 7 0 chr17 24269438 24269573 -65234980 - AluSq/x SINE Alu -176 136 1 6233 223 73 63 chr17 24269577 24269627 -65234926 - L1MC1 LINE L1 -846 5580 5532 1693 166 42 7 chr17 24269627 24269911 -65234642 - AluJb SINE Alu -8 304 11 6233 223 73 63 chr17 24269911 24269957 -65234596 - L1MC1 LINE L1 -894 5532 5488 2338 94 0 28 chr17 24269957 24270275 -65234278 + AluSg SINE Alu 1 309 -1 6233 223 73 63 chr17 24270275 24271556 -65232997 - L1MC1 LINE L1 -938 5488 4220 1140 174 38 2 chr17 24271556 24271792 -65232761 - AluJb SINE Alu -19 293 1 6233 223 73 63 chr17 24271792 24271804 -65232749 - L1MC1 LINE L1 -2206 4220 4210 1608 191 17 7 chr17 24271804 24272097 -65232456 - AluJo SINE Alu -16 296 1 6233 223 73 63 chr17 24272097 24272582 -65231971 - L1MC1 LINE L1 -2216 4210 3731 2236 120 7 0 chr17 24272582 24272881 -65231672 - AluSq SINE Alu -12 301 1 2126 125 3 13 chr17 24272883 24273188 -65231365 - AluSx SINE Alu -10 302 1 6233 223 73 63 chr17 24273188 24275187 -65229366 - L1MC1 LINE L1 -2695 3731 1534 2120 127 0 7 chr17 24275187 24275486 -65229067 - AluSq SINE Alu -16 297 1 6233 223 73 63 chr17 24275486 24275611 -65228942 - L1MC1 LINE L1 -4892 1534 1412 1272 179 93 45 chr17 24275623 24275936 -65228617 + MLT1A1 LTR MaLR 1 328 -37 7228 149 42 34 chr17 24275948 24277017 -65227536 - L1MC1 LINE L1 -5034 1392 332 2278 157 45 29 chr17 24277017 24277057 -65227496 - MSTA LTR MaLR 0 428 390 1904 172 0 0 chr17 24277057 24277359 -65227194 + AluJb SINE Alu 1 302 -10 2278 157 45 29 chr17 24277359 24277739 -65226814 - MSTA LTR MaLR -38 390 1 7228 149 42 34 chr17 24277739 24277979 -65226574 - L1MC1 LINE L1 -6094 332 70 2214 97 3 32 chr17 24277979 24278287 -65226266 - AluSg1 SINE Alu -10 299 1 7228 149 42 34 chr17 24278287 24278341 -65226212 - L1MC1 LINE L1 -6356 70 18 651 213 52 30 chr17 24278352 24278546 -65226007 - L1M4c LINE L1 -4728 2229 1928 679 209 6 70 chr17 24278547 24278705 -65225848 + MLT1D LTR MaLR 1 148 -357 555 197 150 8 chr17 24278691 24278818 -65225735 + MLT1D LTR MaLR 341 485 -20 * 365 236 34 115 chr17 24278830 24278887 -65225666 - L1M4c LINE L1 -6655 204 144 2202 101 0 7 chr17 24278887 24279175 -65225378 - AluSx SINE Alu -24 288 3 365 236 34 115 chr17 24279175 24279325 -65225228 - L1M4c LINE L1 -6715 144 14 882 112 0 77 chr17 24279391 24279534 -65225019 - FLAM_C SINE Alu 0 133 2 4908 210 42 51 chr17 24279542 24280752 -65223801 - L1M1 LINE L1 -3957 3608 2412 2037 115 27 7 chr17 24280752 24281047 -65223506 - AluSx SINE Alu -11 301 1 4908 210 42 51 chr17 24281047 24281285 -65223268 - L1M1 LINE L1 -5153 2412 2173 817 189 0 0 chr17 24281297 24281429 -65223124 + FLAM_C SINE Alu 1 132 -11 672 197 0 23 chr17 24281440 24281572 -65222981 - AluJo SINE Alu -177 135 7 3298 160 42 0 chr17 24281605 24282131 -65222422 - L1M1 LINE L1 -4777 1788 1241 473 256 96 6 chr17 24282925 24283081 -65221472 + MIR SINE MIR 34 203 -59 1675 188 28 0 chr17 24283081 24283368 -65221185 - AluJb SINE Alu 0 312 18 2202 129 28 3 chr17 24283573 24283930 -65220623 - MER47A DNA MER2_type 0 366 1 2341 87 0 3 chr17 24284172 24284470 -65220083 - AluY SINE Alu -14 297 1 21 0 0 0 chr17 24284668 24284689 -65219864 + AT_rich Low_complexity Low_complexity 1 21 0 2178 122 0 0 chr17 24284689 24284977 -65219576 - AluSx SINE Alu -24 288 1 199 250 94 0 chr17 24285168 24285232 -65219321 + MIR SINE MIR 82 151 -57 1007 100 8 0 chr17 24286156 24286286 -65218267 + AluSq/x SINE Alu 6 136 -177 2186 123 7 0 chr17 24286286 24286587 -65217966 + AluSx SINE Alu 1 303 -9 226 181 403 0 chr17 24286612 24286684 -65217869 + MER4A LTR ERV1 1 101 -563 * 1605 115 7 147 chr17 24286683 24287015 -65217538 + MER4A LTR ERV1 263 590 -74 2774 143 50 23 chr17 24287015 24287492 -65217061 + LTR2B LTR ERV1 1 490 0 1605 115 7 147 chr17 24287492 24287558 -65216995 + MER4A LTR ERV1 590 664 0 2490 104 147 27 chr17 24287561 24288082 -65216471 + LTR2B-int LTR ERV1 1 628 -5970 5222 124 82 29 chr17 24288082 24288967 -65215586 + MER4A-int LTR ERV1 215 1146 -5612 540 0 0 0 chr17 24288973 24289033 -65215520 + (TG)n Simple_repeat Simple_repeat 2 61 0 2502 105 132 19 chr17 24289044 24289201 -65215352 + MER4A-int LTR ERV1 1798 1936 -4662 2220 82 41 0 chr17 24289201 24289493 -65215060 + AluY SINE Alu 1 304 -7 2502 105 132 19 chr17 24289493 24289813 -65214740 + MER4A-int LTR ERV1 1936 2329 -4269 2278 84 0 17 chr17 24290126 24290422 -65214131 - AluY SINE Alu -20 291 1 2070 133 3 0 chr17 24290428 24290729 -65213824 - AluSc SINE Alu -3 306 5 304 288 114 15 chr17 24290747 24290879 -65213674 - MIR SINE MIR -71 191 47 447 185 11 11 chr17 24291010 24291102 -65213451 - AluSp/q SINE Alu -10 303 212 1972 146 11 0 chr17 24291371 24291685 -65212868 + AluSx SINE Alu 1 317 0 1970 123 34 0 chr17 24291691 24291983 -65212570 + AluSx SINE Alu 1 302 -10 2503 41 7 10 chr17 24292120 24292415 -65212138 + AluY SINE Alu 1 294 -17 808 151 17 0 chr17 24292541 24292691 -65211862 + FRAM SINE Alu 26 177 0 373 174 14 0 chr17 24292705 24292774 -65211779 + LTR24B-int LTR ERV1 5054 5123 0 1333 222 47 102 chr17 24292774 24292970 -65211583 + LTR24B LTR ERV1 1 206 -370 2288 98 13 0 chr17 24292970 24293277 -65211276 - AluSp SINE Alu -2 311 1 1333 222 47 102 chr17 24293277 24293319 -65211234 + LTR24B LTR ERV1 206 249 -327 2109 146 0 0 chr17 24293319 24293627 -65210926 + AluJb SINE Alu 1 308 -4 1333 222 47 102 chr17 24293627 24294005 -65210548 + LTR24B LTR ERV1 249 576 0 280 275 38 69 chr17 24294322 24294482 -65210071 + MLT1I LTR MaLR 130 284 -125 2533 52 10 3 chr17 24294615 24294920 -65209633 - AluY SINE Alu -4 307 1 503 258 59 50 chr17 24294956 24295177 -65209376 - L1MC4a LINE L1 -1918 5890 5668 2153 168 33 32 chr17 24295177 24295727 -65208826 - MLT2A2 LTR ERVL 0 554 1 1266 228 53 41 chr17 24296006 24296348 -65208205 - MLT1I LTR MaLR 0 409 64 200 368 18 0 chr17 24296499 24296613 -65207940 + L2 LINE L2 2274 2389 -925 1705 163 3 39 chr17 24296785 24297092 -65207461 + AluJb SINE Alu 1 296 -16 180 0 0 0 chr17 24297094 24297114 -65207439 + (CA)n Simple_repeat Simple_repeat 2 21 0 1636 131 0 29 chr17 24298101 24298345 -65206208 + AluSx SINE Alu 38 274 -38 510 17 0 0 chr17 24298400 24298459 -65206094 + (TG)n Simple_repeat Simple_repeat 2 60 0 657 210 90 24 chr17 24298788 24298955 -65205598 + MER3 DNA MER1_type 28 205 -4 2040 121 3 13 chr17 24299162 24299467 -65205086 + AluSx SINE Alu 1 302 -10 777 272 48 41 chr17 24299628 24299800 -65204753 - L1MEc LINE L1 -4112 2149 1980 2032 137 3 3 chr17 24299800 24300092 -65204461 + AluJb SINE Alu 1 292 -20 777 272 48 41 chr17 24300092 24300335 -65204218 - L1MEc LINE L1 -4281 1980 1731 1149 291 106 39 chr17 24300347 24300425 -65204128 - L1MEc LINE L1 -4605 1656 1585 1723 155 69 0 chr17 24300425 24300715 -65203838 - AluSx SINE Alu -2 310 1 1149 291 106 39 chr17 24300715 24300902 -65203651 - L1MEc LINE L1 -4676 1585 1412 731 11 0 0 chr17 24300902 24300991 -65203562 - L1PB1 LINE L1 0 6151 6063 2225 96 3 35 chr17 24300995 24301309 -65203244 - AluSx SINE Alu -8 304 1 1149 291 106 39 chr17 24301309 24301782 -65202771 - L1MEc LINE L1 -4851 1410 862 1294 164 0 36 chr17 24301789 24302014 -65202539 - AluJb SINE Alu -11 301 85 925 124 0 0 chr17 24302016 24302145 -65202408 - AluJo/FLAM SINE Alu -173 129 1 1883 273 61 38 chr17 24302145 24302341 -65202212 - L1MEc LINE L1 -5242 828 638 2272 91 3 3 chr17 24302341 24302628 -65201925 + AluSp SINE Alu 1 287 -26 1883 273 61 38 chr17 24302628 24303222 -65201331 - L1MEc LINE L1 -5432 638 20 2455 50 3 0 chr17 24303382 24303665 -65200888 + AluY SINE Alu 1 308 0 184 42 0 0 chr17 24303665 24303689 -65200864 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2084 139 0 0 chr17 24303895 24304182 -65200371 - AluSx SINE Alu -15 297 11 2049 91 65 7 chr17 24304186 24304461 -65200092 - AluY SINE Alu -20 291 1 31 0 0 0 chr17 24304461 24304492 -65200061 + AT_rich Low_complexity Low_complexity 1 31 0 676 268 36 27 chr17 24304568 24304792 -65199761 - MIR SINE MIR 0 262 37 1055 164 5 46 chr17 24305160 24305355 -65199198 - AluJb SINE Alu -44 268 82 294 272 48 13 chr17 24305355 24305539 -65199014 - L1MC/D LINE L1 -297 5824 5631 874 154 7 0 chr17 24305924 24306060 -65198493 - AluJb SINE Alu -16 296 160 730 244 49 125 chr17 24306084 24306168 -65198385 - L2 LINE L2 -26 3287 3198 2002 99 6 93 chr17 24306168 24306502 -65198051 + AluSx SINE Alu 1 305 -7 730 244 49 125 chr17 24306502 24306826 -65197727 - L2 LINE L2 -115 3198 2910 453 205 181 44 chr17 24307177 24307382 -65197171 + Charlie5 DNA MER1_type 2368 2600 -12 1942 106 14 0 chr17 24308121 24308403 -65196150 + AluSg SINE Alu 9 294 -16 260 238 32 16 chr17 24308531 24308594 -65195959 + CT-rich Low_complexity Low_complexity 4 67 0 1434 159 103 28 chr17 24309078 24309368 -65195185 - AluJo SINE Alu 0 312 1 283 167 100 17 chr17 24309412 24309472 -65195081 + AluJ/FRAM SINE Alu 226 290 -12 2038 98 51 4 chr17 24309719 24309995 -65194558 - AluSp SINE Alu -24 289 1 991 211 0 5 chr17 24310041 24310254 -65194299 + AluSc SINE Alu 2 213 -96 1289 114 6 0 chr17 24310614 24310789 -65193764 - AluSg/x SINE Alu 0 312 137 276 203 0 16 chr17 24310793 24310857 -65193696 + MLT1C LTR MaLR 405 467 0 230 276 9 29 chr17 24311168 24311273 -65193280 + L1MC5 LINE L1 7383 7485 -476 2115 132 0 3 chr17 24311377 24311672 -65192881 + AluSx SINE Alu 1 294 -18 537 192 165 50 chr17 24311807 24312068 -65192485 + pTR5 LTR ERV1 738 1028 -1410 4268 150 79 37 chr17 24312147 24313025 -65191528 + pTR5 LTR ERV1 1 2438 0 342 236 69 56 chr17 24313032 24313154 -65191399 + L1MDa LINE L1 1774 1900 -4640 2126 140 0 13 chr17 24313154 24313462 -65191091 - AluSx SINE Alu -8 304 1 342 236 69 56 chr17 24313462 24313483 -65191070 + L1MDa LINE L1 1900 1919 -4621 2181 129 3 0 chr17 24313500 24313794 -65190759 + AluSx SINE Alu 1 295 -17 29 47 0 0 chr17 24313805 24313848 -65190705 + AT_rich Low_complexity Low_complexity 1 43 0 353 330 26 0 chr17 24313853 24313968 -65190585 + L1MDa LINE L1 1948 2065 -4475 662 162 0 0 chr17 24313975 24314074 -65190479 + AluJ/FLAM SINE Alu 2 100 -212 1461 185 0 23 chr17 24314075 24314334 -65190219 + AluJb SINE Alu 41 293 -19 832 228 114 43 chr17 24314338 24314491 -65190062 + L1M4 LINE L1 4739 4880 -1266 1550 161 77 32 chr17 24314491 24314776 -65189777 + AluJb SINE Alu 1 298 -14 2192 111 7 0 chr17 24314778 24315066 -65189487 + AluSq SINE Alu 3 292 -21 832 228 114 43 chr17 24315066 24315392 -65189161 + L1M4 LINE L1 4880 5255 -891 2114 117 19 64 chr17 24315394 24315956 -65188597 - MER51A LTR ERV1 0 634 1 3880 146 27 19 chr17 24315956 24316936 -65187617 - L1M2 LINE L1 -647 5644 4663 2235 100 0 27 chr17 24316936 24317236 -65187317 - AluSq SINE Alu -18 295 4 3880 146 27 19 chr17 24317236 24317289 -65187264 - L1M2 LINE L1 -1628 4663 4612 2754 156 55 6 chr17 24317289 24317776 -65186777 + MER9 LTR ERVK 1 511 0 11632 130 41 42 chr17 24317776 24318783 -65185770 + HERVK9 LTR ERVK 1 1008 -4937 188 228 0 88 chr17 24318783 24318840 -65185713 + MER5B DNA MER1_type 58 109 -69 11632 130 41 42 chr17 24318840 24320033 -65184520 + HERVK9 LTR ERVK 1008 2253 -3692 1719 188 88 21 chr17 24320079 24320510 -65184043 - MLT1C LTR MaLR -7 460 1 830 187 39 7 chr17 24320745 24320900 -65183653 - AluJb SINE Alu -11 301 142 2395 191 18 107 chr17 24321123 24321777 -65182776 - MER77 LTR ERV1 -9 596 1 346 286 40 0 chr17 24321978 24322104 -65182449 + L2 LINE L2 2887 3017 -296 261 176 12 106 chr17 24322432 24322517 -65182036 + MLT1J LTR MaLR 1 77 -434 2145 107 3 30 chr17 24322606 24322904 -65181649 + AluSp SINE Alu 1 290 -23 525 177 8 15 chr17 24322909 24323039 -65181514 + GA-rich Low_complexity Low_complexity 4 132 0 553 197 24 0 chr17 24323063 24323190 -65181363 + MLT1J-int LTR MaLR 1242 1371 0 334 166 0 2 chr17 24323227 24323291 -65181262 + MLT1D LTR MaLR 400 500 -5 1518 250 37 21 chr17 24323361 24323797 -65180756 - LTR47B LTR ERVL 0 443 1 2151 102 0 36 chr17 24323836 24324141 -65180412 + AluSg SINE Alu 1 294 -16 1948 161 0 3 chr17 24324218 24324510 -65180043 + AluJo SINE Alu 1 291 -21 351 288 0 52 chr17 24324523 24324676 -65179877 + MLT1J LTR MaLR 115 259 -252 237 216 16 112 chr17 24324756 24324881 -65179672 + MLT1J LTR MaLR 392 504 -7 415 250 155 0 chr17 24325181 24325329 -65179224 - MER112 DNA MER1_type -9 251 81 667 202 91 66 chr17 24325330 24325536 -65179017 - MER2 DNA MER2_type 0 345 130 2060 116 3 11 chr17 24325536 24325854 -65178699 + AluSx SINE Alu 1 316 0 667 202 91 66 chr17 24325854 24325889 -65178664 - MER2 DNA MER2_type -215 130 97 240 242 170 52 chr17 24326099 24326252 -65178301 - MIR3 SINE MIR -20 188 18 1210 202 131 18 chr17 24326666 24327002 -65177551 - MLT1D LTR MaLR -7 498 125 285 203 51 0 chr17 24327029 24327088 -65177465 - MLT1D LTR MaLR -442 63 2 1702 164 6 53 chr17 24327226 24327549 -65177004 + AluJo SINE Alu 2 309 -3 705 223 159 116 chr17 24327828 24328132 -65176421 - L2 LINE L2 -185 3128 2838 393 22 0 0 chr17 24328132 24328178 -65176375 + (TG)n Simple_repeat Simple_repeat 1 46 0 705 223 159 116 chr17 24328178 24328219 -65176334 - L2 LINE L2 -475 2838 2800 2335 96 0 3 chr17 24328219 24328520 -65176033 - AluSg SINE Alu -10 300 1 705 223 159 116 chr17 24328520 24328556 -65175997 - L2 LINE L2 -513 2800 2767 2294 147 75 14 chr17 24328556 24328961 -65175592 - L1MB5 LINE L1 0 6174 5742 2415 77 3 0 chr17 24328961 24329259 -65175294 - AluSp SINE Alu -14 299 1 705 223 159 116 chr17 24329269 24329484 -65175069 - L2 LINE L2 -546 2767 2500 248 314 14 0 chr17 24330439 24330509 -65174044 + MIR SINE MIR 82 152 -110 180 346 0 0 chr17 24330529 24330581 -65173972 + L2 LINE L2 3239 3290 -23 1500 199 26 24 chr17 24330691 24331132 -65173421 + LTR2B LTR ERV1 1 490 0 766 190 95 71 chr17 24331144 24331169 -65173384 - MIR SINE MIR -26 236 213 1939 144 10 19 chr17 24331169 24331482 -65173071 - AluSx SINE Alu 0 312 3 766 190 95 71 chr17 24331482 24331667 -65172886 - MIR SINE MIR -49 213 21 287 100 0 0 chr17 24331667 24331734 -65172819 - Alu SINE Alu 0 300 234 2040 124 0 0 chr17 24331734 24332007 -65172546 - AluSx SINE Alu -26 286 14 293 331 31 16 chr17 24332392 24332519 -65172034 + MIR SINE MIR 84 212 -50 2136 123 0 0 chr17 24332534 24332850 -65171703 + AluSq SINE Alu 1 316 0 2312 108 0 0 chr17 24333011 24333306 -65171247 + AluSg SINE Alu 1 295 -15 424 225 268 0 chr17 24333569 24333711 -65170842 + MER5A DNA MER1_type 4 183 -6 432 249 41 45 chr17 24333719 24333940 -65170613 + LTR37B LTR ERV1 249 468 0 372 286 14 34 chr17 24334023 24334170 -65170383 + LTR67 LTR ERVL 23 166 -391 612 175 0 18 chr17 24334286 24334400 -65170153 - FLAM_C SINE Alu 0 143 32 292 200 31 0 chr17 24334401 24334466 -65170087 + MER52A LTR ERV1 1 67 -1688 7958 176 66 42 chr17 24334947 24336596 -65167957 + MER52A LTR ERV1 68 1755 0 1096 141 0 0 chr17 24336659 24336872 -65167681 - AluSg/x SINE Alu 0 346 134 2221 92 0 4 chr17 24336872 24337153 -65167400 - AluSc SINE Alu -20 289 10 1241 120 0 6 chr17 24337153 24337320 -65167233 - AluSx SINE Alu -146 166 1 1301 180 16 8 chr17 24337954 24338199 -65166354 + AluJo SINE Alu 64 310 -2 599 316 42 81 chr17 24338220 24338650 -65165903 + L1MC4 LINE L1 7628 8040 -2 1042 224 138 26 chr17 24338684 24339067 -65165486 + LTR42 LTR ERVL 1 426 -69 2469 58 0 3 chr17 24339285 24339577 -65164976 + AluY SINE Alu 1 291 -20 215 256 55 30 chr17 24339877 24340041 -65164512 + (CCCCAG)n Simple_repeat Simple_repeat 1 168 0 377 278 4 34 chr17 24340305 24340563 -65163990 + G-rich Low_complexity Low_complexity 1 250 0 27 0 0 0 chr17 24340817 24340844 -65163709 + GC_rich Low_complexity Low_complexity 1 27 0 2207 126 0 7 chr17 24341231 24341533 -65163020 - AluSx SINE Alu -12 300 1 1244 147 119 162 chr17 24341686 24341804 -65162749 - LTR65 LTR ERV1 -14 655 533 2256 58 25 0 chr17 24341804 24342109 -65162444 - AluY SINE Alu 0 312 1 1244 147 119 162 chr17 24342109 24342316 -65162237 - LTR65 LTR ERV1 -136 533 355 2000 85 0 0 chr17 24342316 24342595 -65161958 - AluY SINE Alu 0 314 36 1244 147 119 162 chr17 24342595 24342771 -65161782 - LTR65 LTR ERV1 -314 355 173 2128 111 24 0 chr17 24343362 24343651 -65160902 - AluSx SINE Alu -16 296 1 2432 63 0 23 chr17 24344025 24344328 -65160225 + AluY SINE Alu 1 296 -15 2429 82 3 0 chr17 24344341 24344635 -65159918 + AluSp SINE Alu 1 295 -18 713 186 0 7 chr17 24344638 24344778 -65159775 + MER3 DNA MER1_type 31 122 -87 291 162 73 0 chr17 24344786 24344854 -65159699 + MER3 DNA MER1_type 2234 2306 0 1528 254 30 98 chr17 24344917 24345695 -65158858 - L1MEc LINE L1 -5368 1028 304 343 238 36 0 chr17 24345721 24345805 -65158748 + MER81 DNA DNA 2 88 -26 2355 87 3 0 chr17 24345941 24346229 -65158324 - AluSg SINE Alu -21 289 1 1137 107 17 0 chr17 24346229 24346407 -65158146 + MER4A-int LTR ERV1 2315 2495 -4103 1214 145 107 8 chr17 24346407 24346641 -65157912 - LTR8 LTR ERV1 -434 257 1 2617 88 68 53 chr17 24346641 24347101 -65157452 + MER4A-int LTR ERV1 2737 3208 -3390 2339 89 0 22 chr17 24347101 24347414 -65157139 + AluY SINE Alu 2 307 -4 2617 88 68 53 chr17 24347414 24347485 -65157068 + MER4A-int LTR ERV1 3208 3276 -3322 279 0 0 0 chr17 24347490 24347521 -65157032 + (TG)n Simple_repeat Simple_repeat 2 32 0 249 31 0 0 chr17 24347521 24347547 -65157006 + (TA)n Simple_repeat Simple_repeat 2 27 0 890 111 0 0 chr17 24347614 24347731 -65156822 + AluY SINE Alu 24 140 -171 2155 97 32 32 chr17 24347732 24347866 -65156687 + AluY SINE Alu 1 134 -177 2387 91 3 0 chr17 24347866 24348162 -65156391 + AluSp SINE Alu 1 297 -16 2155 97 32 32 chr17 24348162 24348336 -65156217 + AluY SINE Alu 133 309 -2 2049 143 0 28 chr17 24348343 24348664 -65155889 + AluSx SINE Alu 1 312 0 2178 112 0 14 chr17 24348767 24349082 -65155471 + AluSx SINE Alu 1 311 0 809 110 18 0 chr17 24349092 24349201 -65155352 - AluSp/q SINE Alu -10 303 193 15431 88 69 21 chr17 24349205 24349305 -65155248 + MER4A-int LTR ERV1 3987 4081 -2517 2341 96 7 10 chr17 24349305 24349606 -65154947 - AluSq SINE Alu -13 300 1 15431 88 69 21 chr17 24349606 24351995 -65152558 + MER4A-int LTR ERV1 4081 6596 -2 281 97 375 14 chr17 24352003 24352075 -65152478 + MER4A LTR ERV1 1 98 -566 1844 132 3 41 chr17 24352075 24352433 -65152120 + MER4A LTR ERV1 261 664 0 546 324 124 9 chr17 24352470 24352695 -65151858 - MIR SINE MIR 0 262 12 1881 149 28 101 chr17 24352813 24353062 -65151491 + MER57A LTR ERV1 1 208 -195 1945 155 13 7 chr17 24353062 24353241 -65151312 - AluJo SINE Alu 0 312 129 198 91 0 0 chr17 24353241 24353274 -65151279 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 1945 155 13 7 chr17 24353274 24353404 -65151149 - AluJo SINE Alu -183 129 1 1881 149 28 101 chr17 24353404 24353578 -65150975 + MER57A LTR ERV1 208 393 -10 4477 112 8 0 chr17 24353921 24354545 -65150008 + MER41B LTR ERV1 7 635 0 1515 176 73 147 chr17 24354926 24355204 -65149349 + MER67C LTR ERV1 8 305 -405 2003 94 33 0 chr17 24355204 24355507 -65149046 - AluSx SINE Alu 0 312 1 1515 176 73 147 chr17 24355507 24355886 -65148667 + MER67C LTR ERV1 305 617 -93 1840 162 3 0 chr17 24355888 24356191 -65148362 - AluJo SINE Alu 0 312 9 839 298 70 31 chr17 24356226 24356612 -65147941 + L2 LINE L2 2912 3312 -1 248 0 0 30 chr17 24356679 24356712 -65147841 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2331 58 0 22 chr17 24356728 24356902 -65147651 - AluSq SINE Alu -9 304 139 2133 85 3 10 chr17 24356902 24357207 -65147346 - AluY SINE Alu -8 303 1 2331 58 0 22 chr17 24357207 24357343 -65147210 - AluSq SINE Alu -174 139 1 816 176 14 7 chr17 24357344 24357492 -65147061 - AluJb SINE Alu -31 281 133 502 247 88 6 chr17 24357492 24357662 -65146891 + MIR SINE MIR 79 262 0 643 285 61 11 chr17 24357903 24358145 -65146408 - MIR SINE MIR -8 254 6 1003 283 99 11 chr17 24358881 24359428 -65145125 + L1M4 LINE L1 4698 5292 -854 242 240 77 67 chr17 24359592 24359800 -65144753 - L1MC4a LINE L1 -1746 6062 5853 24 32 0 0 chr17 24359832 24359863 -65144690 + AT_rich Low_complexity Low_complexity 1 31 0 2248 103 4 1 chr17 24359983 24360455 -65144098 + MER51A LTR ERV1 1 634 0 1940 123 10 7 chr17 24360675 24360976 -65143577 + AluSx SINE Alu 1 302 -10 2658 203 92 36 chr17 24361013 24361508 -65143045 + L1MC/D LINE L1 2 542 -5998 2299 90 0 3 chr17 24361508 24361818 -65142735 - AluSc SINE Alu 0 309 1 2658 203 92 36 chr17 24361818 24361961 -65142592 + L1MC/D LINE L1 542 676 -5864 1235 267 59 32 chr17 24361985 24362393 -65142160 - LTR47B LTR ERVL -24 419 1 1601 202 156 3 chr17 24362393 24362784 -65141769 + L1MC/D LINE L1 676 1126 -5414 2291 99 3 0 chr17 24362785 24363097 -65141456 + AluSp SINE Alu 1 313 0 488 219 0 0 chr17 24363121 24363217 -65141336 + AluJ/FLAM SINE Alu 1 96 -216 1338 160 0 61 chr17 24363499 24363793 -65140760 + AluJo SINE Alu 27 302 -10 2821 206 44 61 chr17 24363793 24363961 -65140592 + L1MC/D LINE L1 4715 4884 -1656 1546 156 52 21 chr17 24363961 24364249 -65140304 + AluJb SINE Alu 1 297 -15 2821 206 44 61 chr17 24364249 24364501 -65140052 + L1MC/D LINE L1 4884 5139 -1401 1755 168 0 10 chr17 24364501 24364805 -65139748 - AluJo SINE Alu -11 301 1 2821 206 44 61 chr17 24364805 24365361 -65139192 + L1MC/D LINE L1 5139 5675 -865 816 142 0 17 chr17 24365362 24365482 -65139071 + FLAM_C SINE Alu 1 118 -25 954 164 10 39 chr17 24365497 24365704 -65138849 + L1MC/D LINE L1 5666 5866 -887 1753 142 7 23 chr17 24366511 24366814 -65137739 + AluSx SINE Alu 1 298 -14 297 167 0 0 chr17 24366914 24366968 -65137585 + A-rich Low_complexity Low_complexity 1 54 0 372 174 6 180 chr17 24366979 24367146 -65137407 - MLT1B LTR MaLR -73 317 180 333 256 12 0 chr17 24367199 24367281 -65137272 - MLT1-int LTR MaLR -660 711 629 21 0 0 0 chr17 24367282 24367303 -65137250 + AT_rich Low_complexity Low_complexity 1 21 0 1705 174 0 7 chr17 24367311 24367605 -65136948 + AluJb SINE Alu 1 292 -20 1028 160 105 0 chr17 24367619 24367800 -65136753 - MER51A LTR ERV1 -434 200 1 238 187 42 18 chr17 24367800 24367883 -65136670 + L1ME2 LINE L1 5254 5335 -811 1463 112 48 64 chr17 24367885 24367988 -65136565 + L1MA8 LINE L1 5846 5949 -342 1867 151 3 3 chr17 24367988 24368287 -65136266 + AluJb SINE Alu 1 299 -13 1463 112 48 64 chr17 24368287 24368478 -65136075 + L1MA8 LINE L1 5949 6135 -156 913 223 73 51 chr17 24368449 24368723 -65135830 + L1ME2 LINE L1 5310 5589 -575 * 681 99 0 0 chr17 24368740 24368841 -65135712 - AluSg/x SINE Alu -1 311 211 1797 224 37 20 chr17 24368841 24369300 -65135253 + L1ME2 LINE L1 5582 6048 -116 794 232 16 4 chr17 24369409 24369663 -65134890 - L1M4c LINE L1 -4033 2351 2095 799 302 47 4 chr17 24369676 24369931 -65134622 + ERVL LTR ERVL 5166 5431 -333 48 0 0 0 chr17 24370371 24370419 -65134134 + AT_rich Low_complexity Low_complexity 1 48 0 426 129 0 0 chr17 24370419 24370481 -65134072 - AluS SINE Alu -255 63 2 203 146 24 0 chr17 24370912 24370953 -65133600 + T-rich Low_complexity Low_complexity 2 43 0 43 56 0 0 chr17 24371152 24371223 -65133330 + AT_rich Low_complexity Low_complexity 1 71 0 2016 135 13 0 chr17 24371248 24371551 -65133002 + AluJo SINE Alu 1 307 -5 1981 113 17 3 chr17 24371552 24371844 -65132709 + AluSx SINE Alu 1 296 -16 1916 121 0 56 chr17 24372164 24372336 -65132217 - AluSx SINE Alu -8 304 157 2319 74 3 0 chr17 24372336 24372634 -65131919 - AluSq SINE Alu -14 299 1 1916 121 0 56 chr17 24372634 24372783 -65131770 - AluSx SINE Alu -155 157 1 264 284 199 14 chr17 24372789 24372930 -65131623 - MIR SINE MIR -56 206 40 214 283 0 0 chr17 24372961 24373007 -65131546 - MIR SINE MIR -5 257 212 249 33 0 0 chr17 24373020 24373050 -65131503 + (TCCA)n Simple_repeat Simple_repeat 4 33 0 1214 153 12 68 chr17 24373053 24373302 -65131251 - Tigger2 DNA MER2_type 0 2718 2484 1188 126 0 0 chr17 24373303 24373478 -65131075 + AluJb SINE Alu 137 311 -1 778 87 117 152 chr17 24373479 24373505 -65131048 - Tigger2 DNA MER2_type -205 2513 2488 1916 139 7 0 chr17 24373505 24373806 -65130747 + AluJb SINE Alu 1 303 -9 778 87 117 152 chr17 24373806 24374009 -65130544 - Tigger2 DNA MER2_type -230 2488 2292 362 190 0 0 chr17 24374019 24374077 -65130476 + MER8 DNA MER2_type 182 239 0 205 97 0 0 chr17 24374085 24374116 -65130437 - MIR SINE MIR -73 189 159 1665 183 0 3 chr17 24374196 24374507 -65130046 + AluJo SINE Alu 1 310 -2 2187 94 10 13 chr17 24374726 24375034 -65129519 - AluY SINE Alu -4 307 1 310 195 103 23 chr17 24375130 24375217 -65129336 - MIR SINE MIR -104 158 65 434 296 30 86 chr17 24375402 24375635 -65128918 - L2 LINE L2 -46 3226 3007 1321 191 39 48 chr17 24375673 24375982 -65128571 + AluJo SINE Alu 1 306 -6 2052 130 7 0 chr17 24375982 24376290 -65128263 + AluSx SINE Alu 1 310 -2 1232 238 194 39 chr17 24376346 24376837 -65127716 - MLT1G1 LTR MaLR -28 567 1 2344 75 0 10 chr17 24377036 24377343 -65127210 - AluY SINE Alu -7 304 1 243 224 45 0 chr17 24377664 24377731 -65126822 - MIR SINE MIR -44 218 149 1373 94 35 0 chr17 24377733 24377936 -65126617 - AluSg/x SINE Alu -17 295 86 470 259 107 8 chr17 24377938 24378069 -65126484 - MIR SINE MIR -112 150 7 247 286 71 0 chr17 24378228 24378257 -65126296 - L1ME3 LINE L1 -1 6161 6135 2053 105 0 0 chr17 24378257 24378542 -65126011 + AluSx SINE Alu 12 296 -16 247 286 71 0 chr17 24378542 24378610 -65125943 - L1ME3 LINE L1 -27 6135 6057 * 504 164 170 18 chr17 24378606 24378771 -65125782 + L1ME3 LINE L1 5853 6042 -120 201 147 0 0 chr17 24379005 24379039 -65125514 + (T)n Simple_repeat Simple_repeat 1 34 0 2210 79 6 29 chr17 24379692 24380007 -65124546 - AluSg SINE Alu -2 308 1 949 78 39 0 chr17 24380011 24380139 -65124414 - AluSq/x SINE Alu -180 133 1 2210 87 17 0 chr17 24380696 24380995 -65123558 - AluSp SINE Alu -9 304 1 1727 97 27 85 chr17 24381016 24381347 -65123206 - AluSx SINE Alu 0 312 1 2182 51 0 0 chr17 24381353 24381627 -65122926 - AluY SINE Alu -8 303 30 2413 145 20 2 chr17 24381864 24382258 -65122295 - MER57A LTR ERV1 -2 401 1 1895 135 0 0 chr17 24382459 24382770 -65121783 + AluSx SINE Alu 1 311 0 1558 162 48 14 chr17 24382798 24383088 -65121465 + AluJo SINE Alu 1 300 -12 2318 72 0 26 chr17 24383090 24383397 -65121156 + AluY SINE Alu 1 299 -12 2139 70 3 30 chr17 24383398 24383697 -65120856 + AluY SINE Alu 1 291 -20 2192 87 3 0 chr17 24384068 24384354 -65120199 + AluSx SINE Alu 5 291 -21 23 0 0 0 chr17 24384354 24384377 -65120176 + AT_rich Low_complexity Low_complexity 1 23 0 2400 192 99 48 chr17 24384450 24385055 -65119498 + LTR27 LTR ERV1 1 636 0 2815 92 12 12 chr17 24385060 24385464 -65119089 - MER4A LTR ERV1 0 664 261 677 111 0 10 chr17 24385464 24385563 -65118990 - MER4A LTR ERV1 -566 98 1 2120 60 63 7 chr17 24385709 24385993 -65118560 - AluY SINE Alu -11 300 1 4741 132 74 46 chr17 24386006 24386571 -65117982 - MER4D LTR ERV1 0 903 356 1916 116 53 0 chr17 24386571 24386855 -65117698 - AluSx SINE Alu -12 300 2 4741 132 74 46 chr17 24386855 24387132 -65117421 - MER4D LTR ERV1 -547 356 33 8210 50 16 10 chr17 24387132 24388133 -65116420 - LTR13 LTR ERVK 0 1007 1 4741 132 74 46 chr17 24388133 24388167 -65116386 - MER4D LTR ERV1 -870 33 1 5047 115 34 4 chr17 24388227 24388982 -65115571 + MER4E LTR ERV1 1 778 -1 435 324 24 19 chr17 24388984 24389191 -65115362 + PABL_B-int LTR ERV1 6419 6626 -496 1296 140 63 14 chr17 24389195 24389416 -65115137 + MER4D LTR ERV1 1 232 -671 1050 55 11 44 chr17 24389516 24389698 -65114855 + AluSg/x SINE Alu 124 299 -13 1874 136 13 0 chr17 24389957 24390265 -65114288 - AluJb SINE Alu 0 312 1 27 0 0 0 chr17 24390396 24390423 -65114130 + AT_rich Low_complexity Low_complexity 1 27 0 515 151 47 0 chr17 24390423 24390509 -65114044 - FLAM_C SINE Alu -26 117 28 891 155 53 71 chr17 24390673 24390899 -65113654 - L1MD2 LINE L1 -10 6349 6128 * 6811 221 69 11 chr17 24390897 24392597 -65111956 - L1MC3 LINE L1 -167 7618 5825 2501 52 0 3 chr17 24392597 24392904 -65111649 - AluY SINE Alu -5 306 1 6811 221 69 11 chr17 24392904 24392952 -65111601 - L1MC3 LINE L1 -1960 5825 5781 360 201 19 115 chr17 24392952 24393161 -65111392 - L1MC5 LINE L1 -431 7530 7342 463 198 9 66 chr17 24393645 24393751 -65110802 - Tigger7 DNA MER2_type -1 2490 2391 * 2405 182 53 18 chr17 24393741 24394235 -65110318 - Tigger7 DNA MER2_type -222 511 1 2119 92 7 3 chr17 24394604 24394899 -65109654 + AluSx SINE Alu 1 296 -16 1837 122 58 0 chr17 24395700 24395995 -65108558 - AluJb SINE Alu 0 312 1 400 208 50 10 chr17 24396066 24396167 -65108386 - MLT1C LTR MaLR -15 452 348 1916 169 21 12 chr17 24396326 24396663 -65107890 - MER7A DNA MER2_type -7 339 2 436 286 101 14 chr17 24397243 24397508 -65107045 - L1ME3 LINE L1 -267 5895 5592 1262 249 166 26 chr17 24397523 24398210 -65106343 - L1MC4 LINE L1 -2 8040 7258 309 109 0 0 chr17 24398238 24398284 -65106269 + (CATA)n Simple_repeat Simple_repeat 1 46 0 1902 165 32 0 chr17 24398291 24398606 -65105947 - MER2 DNA MER2_type -20 325 1 365 264 31 39 chr17 24398624 24398753 -65105800 - L1MB5 LINE L1 0 6174 6047 1199 225 31 17 chr17 24398757 24399050 -65105503 - L1MB5 LINE L1 -166 6008 5712 492 225 43 22 chr17 24399062 24399200 -65105353 - L1MC4 LINE L1 -800 7242 7102 1955 129 7 3 chr17 24400671 24400966 -65103587 - AluSx SINE Alu -16 296 1 1577 119 15 128 chr17 24401342 24401559 -65102994 - AluJo SINE Alu -1 301 134 1990 86 31 14 chr17 24401559 24401849 -65102704 + AluSc SINE Alu 1 295 -14 1577 119 15 128 chr17 24401849 24401968 -65102585 - AluJo SINE Alu -168 134 3 1564 168 39 11 chr17 24402040 24402325 -65102228 + AluJb SINE Alu 12 304 -8 1826 89 8 0 chr17 24402428 24402675 -65101878 - AluSx SINE Alu -63 249 1 3017 197 65 41 chr17 24402677 24403668 -65100885 - L1MB5 LINE L1 -35 6139 5115 1791 150 3 10 chr17 24403668 24403968 -65100585 - AluJb SINE Alu -14 298 1 3017 197 65 41 chr17 24403968 24404226 -65100327 - L1MB5 LINE L1 -1059 5115 4865 439 332 27 11 chr17 24404741 24404928 -65099625 - MIR SINE MIR -52 210 21 1845 136 31 3 chr17 24404986 24405280 -65099273 - AluJb SINE Alu -8 304 3 3033 129 19 25 chr17 24405306 24405819 -65098734 - L1PA13 LINE L1 -7 6156 5647 2381 71 0 0 chr17 24405839 24406133 -65098420 - AluY SINE Alu -15 296 3 189 0 0 0 chr17 24406250 24406271 -65098282 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1902 153 3 3 chr17 24406527 24406835 -65097718 - AluSx SINE Alu -4 308 1 273 57 0 0 chr17 24408372 24408407 -65096146 + (T)n Simple_repeat Simple_repeat 1 35 0 183 357 62 0 chr17 24409697 24409809 -65094744 - L2 LINE L2 -10 3262 3144 1597 157 68 0 chr17 24409936 24410217 -65094336 - AluJb SINE Alu -12 300 1 520 275 13 27 chr17 24411417 24411566 -65092987 + MER58B DNA MER1_type 195 341 0 1086 307 60 16 chr17 24411729 24412175 -65092378 - L1ME1 LINE L1 -6 6160 5695 518 259 130 0 chr17 24413628 24413790 -65090763 - MER5A DNA MER1_type -2 187 5 2244 60 4 0 chr17 24414553 24414858 -65089695 - AluY SINE Alu 0 306 1 842 149 0 8 chr17 24416375 24416509 -65088044 - FLAM_A SINE Alu 0 133 1 1820 126 65 0 chr17 24417970 24418248 -65086305 - AluSx SINE Alu -13 299 4 880 132 0 111 chr17 24418472 24418661 -65085892 - FRAM SINE Alu -15 161 1 2116 118 0 13 chr17 24418665 24418978 -65085575 - AluSx SINE Alu -3 309 1 2183 114 3 3 chr17 24419534 24419842 -65084711 - AluSp SINE Alu -5 308 1 551 268 95 0 chr17 24419853 24420021 -65084532 - L1MD1 LINE L1 0 6242 6059 1213 236 62 21 chr17 24420024 24420410 -65084143 - L1MD1 LINE L1 -232 6010 5609 464 226 97 77 chr17 24421129 24421284 -65083269 - MER58C DNA MER1_type 0 215 58 2272 88 0 0 chr17 24421848 24422143 -65082410 + AluSc SINE Alu 1 295 -14 765 243 205 35 chr17 24422467 24422871 -65081682 - MLT1D LTR MaLR -6 499 27 2140 117 7 0 chr17 24424719 24425026 -65079527 - AluSq SINE Alu -4 309 1 653 253 269 0 chr17 24427014 24427263 -65077290 - MER58B DNA MER1_type 0 341 26 1935 100 75 0 chr17 24427584 24427865 -65076688 - AluSq SINE Alu -11 302 1 431 349 33 19 chr17 24429769 24429981 -65074572 - ERVL LTR ERVL -810 4954 4740 562 331 87 13 chr17 24430052 24430584 -65073969 - ERVL LTR ERVL -1143 4621 3963 332 256 163 69 chr17 24434376 24434739 -65069814 + MLT1H LTR MaLR 115 511 -38 403 351 21 16 chr17 24435118 24435309 -65069244 + L1MC4a LINE L1 5697 5888 -1920 216 0 0 0 chr17 24435481 24435505 -65069048 + (A)n Simple_repeat Simple_repeat 1 24 0 269 319 0 0 chr17 24436346 24436415 -65068138 + (TG)n Simple_repeat Simple_repeat 1 69 0 183 347 106 33 chr17 24437629 24437903 -65066650 + L2 LINE L2 1991 2284 -1030 1135 252 93 32 chr17 24438018 24438458 -65066095 + MLT1C LTR MaLR 1 467 0 394 120 40 50 chr17 24439081 24439181 -65065372 + LTR52 LTR ERVL 201 299 -122 535 212 15 6 chr17 24439288 24439437 -65065116 - L1P LINE L1 -1561 4585 4432 261 228 76 43 chr17 24439458 24439550 -65065003 + LTR52 LTR ERVL 316 410 -11 193 219 0 47 chr17 24439625 24439689 -65064864 + L2 LINE L2 2917 2977 -295 2045 133 7 0 chr17 24439710 24440011 -65064542 - AluSq SINE Alu -10 303 1 196 329 0 13 chr17 24440104 24440180 -65064373 - MIR SINE MIR -73 135 61 274 320 56 25 chr17 24441067 24441204 -65063349 + MIR SINE MIR 21 159 -49 3688 110 25 8 chr17 24441415 24442006 -65062547 - L1PA16 LINE L1 -105 6061 5461 2154 103 7 3 chr17 24442105 24442407 -65062146 - AluSp SINE Alu -10 303 1 7163 62 7 27 chr17 24442422 24443715 -65060838 - SVA Other Other -683 1386 393 21 36 0 0 chr17 24443766 24443794 -65060759 + GC_rich Low_complexity Low_complexity 1 28 0 505 259 191 0 chr17 24443974 24444136 -65060417 + MIR SINE MIR 58 250 -12 2182 90 0 32 chr17 24444685 24444996 -65059557 - AluSp SINE Alu -12 301 1 422 219 26 44 chr17 24445149 24445263 -65059290 + MIR SINE MIR 12 123 -139 * 446 254 141 27 chr17 24445259 24445444 -65059109 - L2 LINE L2 -10 3303 3098 287 259 164 31 chr17 24445472 24445758 -65058795 + L1MC5 LINE L1 7603 7926 -35 538 286 103 5 chr17 24445784 24446008 -65058545 - L2 LINE L2 -188 3084 2839 259 223 223 0 chr17 24446361 24446464 -65058089 + MIR3 SINE MIR 15 140 -68 497 306 26 91 chr17 24446475 24446903 -65057650 + L2 LINE L2 2855 3254 -18 684 300 16 15 chr17 24446984 24447226 -65057327 - L1ME3 LINE L1 -8 6162 5927 323 262 99 21 chr17 24447227 24447368 -65057185 - L1ME3 LINE L1 -269 5893 5742 1513 187 55 3 chr17 24447464 24447753 -65056800 + AluJo SINE Alu 1 304 -8 1335 289 132 68 chr17 24447760 24448916 -65055637 + HAL1 LINE L1 3 1233 -1274 2043 91 3 11 chr17 24449016 24449303 -65055250 + AluSc SINE Alu 25 309 0 3475 200 56 21 chr17 24449310 24449368 -65055185 + L1MB4 LINE L1 5277 5332 -848 2086 95 0 3 chr17 24449368 24449681 -65054872 + AluY SINE Alu 1 312 0 3475 200 56 21 chr17 24449681 24450462 -65054091 + L1MB4 LINE L1 5332 6146 -34 396 333 75 11 chr17 24450905 24451091 -65053462 + MIR SINE MIR 47 244 -18 301 242 0 17 chr17 24451578 24451698 -65052855 + GA-rich Low_complexity Low_complexity 3 120 0 32 26 0 0 chr17 24452254 24452293 -65052260 + AT_rich Low_complexity Low_complexity 1 39 0 786 231 19 0 chr17 24452299 24452455 -65052098 - AluJo/FRAM SINE Alu -21 291 133 289 267 14 27 chr17 24652914 24653060 -64851493 + (TTATA)n Simple_repeat Simple_repeat 3 146 0 369 156 0 0 chr17 24653061 24653125 -64851428 - MLT2B2 LTR ERVL -451 64 1 1246 190 16 75 chr17 24654031 24654336 -64850217 - AluJo SINE Alu -15 297 11 2198 71 41 10 chr17 24654787 24655082 -64849471 - AluYa5 SINE Alu -7 304 1 2253 89 0 7 chr17 24656084 24656377 -64848176 - AluY SINE Alu -2 309 19 624 100 0 0 chr17 24657109 24657199 -64847354 + AluY SINE Alu 217 306 -5 4773 170 26 25 chr17 24657893 24659118 -64845435 - L1MA7 LINE L1 -5 6286 5058 234 299 23 11 chr17 24659139 24659226 -64845327 + MIR3 SINE MIR 113 200 -8 1695 167 27 17 chr17 24660414 24660713 -64843840 - AluJo SINE Alu -10 302 1 2137 126 3 0 chr17 24661381 24661675 -64842878 - AluSq SINE Alu -18 295 1 1757 175 13 10 chr17 24661821 24662124 -64842429 + AluJo SINE Alu 3 306 -6 219 182 23 0 chr17 24662139 24662183 -64842370 + A-rich Low_complexity Low_complexity 1 45 0 2287 100 3 0 chr17 24662304 24662603 -64841950 + AluSp SINE Alu 1 300 -13 25 0 0 0 chr17 24666186 24666211 -64838342 + AT_rich Low_complexity Low_complexity 1 25 0 722 274 167 35 chr17 24667100 24667677 -64836876 + L2 LINE L2 2592 3246 -67 2197 113 0 7 chr17 24668411 24668712 -64835841 + AluSx SINE Alu 1 299 -13 841 185 0 34 chr17 24668900 24669078 -64835475 - AluJo SINE Alu -19 293 122 257 154 0 46 chr17 24669556 24669621 -64834932 - L1MCa LINE L1 -4359 2067 2006 419 218 18 0 chr17 24669624 24669734 -64834819 + (CATATA)n Simple_repeat Simple_repeat 6 117 0 225 261 0 22 chr17 24669734 24669826 -64834727 - L1MC4 LINE L1 -1339 6703 6614 225 150 50 0 chr17 24669826 24669866 -64834687 + (CATA)n Simple_repeat Simple_repeat 4 45 0 331 161 0 0 chr17 24669866 24669922 -64834631 - L1MC4 LINE L1 -1339 6703 6648 2104 88 25 14 chr17 24669945 24670228 -64834325 - AluSg SINE Alu -24 286 1 1666 92 4 40 chr17 24670820 24671070 -64833483 - AluSx SINE Alu -8 304 64 2134 83 50 0 chr17 24671578 24671856 -64832697 + AluSc SINE Alu 1 292 -17 1314 189 102 22 chr17 24671886 24672161 -64832392 + AluJb SINE Alu 1 297 -15 1933 141 3 3 chr17 24672895 24673208 -64831345 + AluSg SINE Alu 3 315 0 880 169 97 147 chr17 24673693 24673888 -64830665 + L1MC5 LINE L1 6732 6935 -1026 1737 183 6 6 chr17 24673888 24674200 -64830353 + AluJb SINE Alu 1 312 0 880 169 97 147 chr17 24674200 24674488 -64830065 + L1MC5 LINE L1 6935 7191 -770 599 186 174 12 chr17 24674503 24674664 -64829889 - MER20 DNA MER1_type 0 219 33 778 192 179 19 chr17 24674681 24674713 -64829840 + L1MC5 LINE L1 7203 7229 -732 333 0 0 0 chr17 24674713 24674750 -64829803 + (CA)n Simple_repeat Simple_repeat 2 38 0 778 192 179 19 chr17 24674750 24675029 -64829524 + L1MC5 LINE L1 7229 7564 -397 207 0 0 0 chr17 24675058 24675081 -64829472 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1154 172 64 0 chr17 24675090 24675294 -64829259 + AluJb SINE Alu 92 308 -4 2809 141 11 27 chr17 24675590 24676065 -64828488 + MLT1C LTR MaLR 1 467 0 1956 150 6 13 chr17 24676272 24676586 -64827967 + AluJb SINE Alu 1 312 0 1302 169 0 5 chr17 24676678 24676879 -64827674 - AluJo SINE Alu -108 204 5 2305 115 0 0 chr17 24677336 24677641 -64826912 + AluSx SINE Alu 1 305 -7 2127 104 0 7 chr17 24677680 24677967 -64826586 + AluSx SINE Alu 21 305 -7 596 195 47 39 chr17 24678384 24678512 -64826041 - FLAM_A SINE Alu -4 129 1 220 356 114 41 chr17 24678528 24678694 -64825859 + MIR SINE MIR 8 180 -57 1911 156 0 7 chr17 24680573 24680874 -64823679 + AluJb SINE Alu 5 303 -9 2077 121 10 22 chr17 24681000 24681314 -64823239 - AluSx SINE Alu -2 310 1 2609 35 0 13 chr17 24683357 24683672 -64820881 + AluY SINE Alu 1 311 0 2674 160 45 37 chr17 24684088 24684352 -64820201 + L1MC4 LINE L1 6976 7236 -806 2235 117 0 0 chr17 24684352 24684660 -64819893 + AluSx SINE Alu 1 308 -4 2674 160 45 37 chr17 24684660 24685044 -64819509 + L1MC4 LINE L1 7236 7629 -413 487 153 0 259 chr17 24685050 24685139 -64819414 + L1MC4 LINE L1 7754 7864 -178 1847 90 131 4 chr17 24685139 24685407 -64819146 + AluSx SINE Alu 1 302 0 487 153 0 259 chr17 24685407 24685630 -64818923 + L1MC4 LINE L1 7864 7985 -57 1137 146 6 0 chr17 24685630 24685808 -64818745 - AluSg/x SINE Alu -12 298 120 2072 118 0 7 chr17 24685985 24686281 -64818272 + AluSq SINE Alu 5 298 -15 2237 114 0 3 chr17 24686405 24686704 -64817849 + AluSq SINE Alu 1 298 -15 184 216 118 0 chr17 24687606 24687657 -64816896 - L2 LINE L2 0 3313 3257 673 138 14 51 chr17 24687834 24687972 -64816581 + FLAM_C SINE Alu 1 133 0 311 281 160 31 chr17 24688468 24688756 -64815797 + L1MC4a LINE L1 5630 5954 -1854 308 64 106 0 chr17 24688756 24688850 -64815703 + (TA)n Simple_repeat Simple_repeat 2 105 0 237 277 54 77 chr17 24689029 24689200 -64815353 + L1MC4a LINE L1 6129 6303 -1505 2195 117 0 0 chr17 24689200 24689491 -64815062 - AluSg SINE Alu -18 292 2 237 277 54 77 chr17 24689491 24689738 -64814815 + L1MC4a LINE L1 6303 6537 -1271 2160 118 0 0 chr17 24689738 24690043 -64814510 + AluSg1 SINE Alu 1 305 -4 237 277 54 77 chr17 24690043 24690088 -64814465 + L1MC4a LINE L1 6537 6582 -1226 1251 153 5 10 chr17 24690088 24690291 -64814262 + AluSx SINE Alu 33 234 -78 596 140 10 0 chr17 24690293 24690393 -64814160 + AluJb SINE Alu 203 303 -9 2134 142 0 0 chr17 24690402 24690697 -64813856 + AluSg SINE Alu 1 295 -15 2354 96 0 3 chr17 24690715 24691017 -64813536 + AluSc SINE Alu 1 301 -8 354 242 126 26 chr17 24691031 24691221 -64813332 + L1MC4 LINE L1 7110 7318 -724 1851 140 46 0 chr17 24691224 24691509 -64813044 + AluSx SINE Alu 1 298 -14 226 256 26 0 chr17 24691513 24691591 -64812962 + L1MC4 LINE L1 7822 7901 -141 280 332 61 19 chr17 24691817 24692031 -64812522 - L2 LINE L2 -1228 2086 1864 1632 160 46 3 chr17 24692038 24692320 -64812233 + AluSx SINE Alu 1 294 -18 2320 95 0 0 chr17 24692324 24692619 -64811934 + AluY SINE Alu 3 297 -14 219 349 16 0 chr17 24692770 24692833 -64811720 + MIR SINE MIR 14 77 -185 210 275 122 76 chr17 24692836 24692967 -64811586 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 24693270 24693298 -64811255 + AT_rich Low_complexity Low_complexity 1 28 0 218 229 145 99 chr17 24694363 24694494 -64810059 - MIR SINE MIR -82 180 44 238 333 16 0 chr17 24694497 24694560 -64809993 - MIR SINE MIR -185 77 14 2050 111 0 81 chr17 24694714 24694906 -64809647 - AluSx SINE Alu -5 307 152 2403 68 3 3 chr17 24694906 24695217 -64809336 - AluY SINE Alu 0 311 1 2050 111 0 81 chr17 24695217 24695358 -64809195 - AluSx SINE Alu -160 152 1 1957 143 6 16 chr17 24695378 24695693 -64808860 - AluSx SINE Alu 0 312 1 2351 74 0 0 chr17 24695850 24696148 -64808405 + AluY SINE Alu 2 299 -12 595 273 47 20 chr17 24696968 24697265 -64807288 - L1M4 LINE L1 -1681 4465 4161 264 133 0 22 chr17 24697274 24697319 -64807234 - Alu SINE Alu -258 44 1 1684 149 30 30 chr17 24697533 24697828 -64806725 - AluJb SINE Alu -15 297 3 303 193 0 0 chr17 24697870 24697927 -64806626 - AluJ/FLAM SINE Alu -245 57 1 2584 169 17 117 chr17 24698242 24698838 -64805715 + LTR34 LTR ERV1 4 507 -192 2283 92 3 0 chr17 24698838 24699132 -64805421 - AluSp SINE Alu -18 295 1 2584 169 17 117 chr17 24699132 24699306 -64805247 + LTR34 LTR ERV1 507 697 -2 25 31 0 0 chr17 24699331 24699363 -64805190 + AT_rich Low_complexity Low_complexity 1 32 0 416 202 21 0 chr17 24699397 24699491 -64805062 + L1MC/D LINE L1 5166 5261 -885 633 224 19 9 chr17 24699544 24699758 -64804795 + L1MC/D LINE L1 5259 5474 -2311 1057 202 40 78 chr17 24699853 24700224 -64804329 - MSTD LTR MaLR -39 357 1 2304 108 0 0 chr17 24700373 24700669 -64803884 - AluSq SINE Alu -17 296 1 1210 171 0 14 chr17 24700695 24700907 -64803646 + AluJb SINE Alu 4 210 -102 3133 180 60 26 chr17 24700996 24701010 -64803543 - L1MB3 LINE L1 -2 6182 6170 1305 194 21 4 chr17 24701010 24701289 -64803264 - L1MB3 LINE L1 -5 6178 5895 2442 91 7 0 chr17 24701280 24701587 -64802966 - AluSx SINE Alu -3 309 1 3133 180 60 26 chr17 24701587 24702000 -64802553 - L1MB3 LINE L1 -312 5872 5443 1301 271 138 24 chr17 24702453 24702505 -64802048 - L1ME2 LINE L1 -12 6152 6107 1772 163 10 7 chr17 24702505 24702800 -64801753 - AluJo SINE Alu -16 296 1 1301 271 138 24 chr17 24702800 24703259 -64801294 - L1ME2 LINE L1 -57 6107 5561 1920 142 6 22 chr17 24703259 24703576 -64800977 - AluJb SINE Alu 0 312 1 1301 271 138 24 chr17 24703576 24703657 -64800896 - L1ME2 LINE L1 -603 5561 5491 328 210 74 0 chr17 24704441 24704522 -64800031 + MIR3 SINE MIR 68 154 -54 2678 46 0 0 chr17 24706278 24706583 -64797970 + AluY SINE Alu 1 305 -6 1771 164 7 32 chr17 24706649 24706959 -64797594 - AluJo SINE Alu -10 302 1 475 311 103 38 chr17 24707173 24707572 -64796981 + L1ME LINE L1 3782 4206 -1940 225 0 0 0 chr17 24708029 24708054 -64796499 + (CA)n Simple_repeat Simple_repeat 2 26 0 3939 227 162 70 chr17 24708134 24709105 -64795448 + HAL1 LINE L1 14 895 -1612 2382 103 42 3 chr17 24709105 24709465 -64795088 + L1MB2 LINE L1 5794 6167 -4 3939 227 162 70 chr17 24709465 24710334 -64794219 + HAL1 LINE L1 895 2088 -419 2223 111 10 0 chr17 24710334 24710632 -64793921 + AluSx SINE Alu 1 301 -11 3939 227 162 70 chr17 24710632 24710975 -64793578 + HAL1 LINE L1 2088 2398 -109 327 295 100 16 chr17 24711278 24711468 -64793085 + L1ME LINE L1 5487 5692 -429 1465 208 0 24 chr17 24711522 24711811 -64792742 - AluJo SINE Alu -30 282 1 3724 146 11 22 chr17 24711866 24712961 -64791592 - L1MA4A LINE L1 -284 6019 4970 4285 175 52 18 chr17 24712965 24713913 -64790640 + L1M4 LINE L1 3835 4814 -1332 1519 188 41 16 chr17 24713924 24714243 -64790310 - L1MB5 LINE L1 -38 6136 5810 2326 185 73 14 chr17 24714243 24714761 -64789792 - MER68 LTR ERV1 -13 549 1 1454 148 107 0 chr17 24715579 24715823 -64788730 - AluJb SINE Alu -42 270 1 375 62 250 0 chr17 24715884 24715948 -64788605 + MADE1 DNA Mariner 1 80 0 806 219 10 42 chr17 24715965 24716157 -64788396 - MER58A DNA MER1_type -9 215 30 2043 131 0 0 chr17 24716838 24717142 -64787411 - AluSx SINE Alu 0 304 1 25 95 0 0 chr17 24717145 24717219 -64787334 + AT_rich Low_complexity Low_complexity 1 74 0 26 0 0 0 chr17 24717290 24717316 -64787237 + AT_rich Low_complexity Low_complexity 1 26 0 2355 76 0 41 chr17 24717379 24717694 -64786859 - AluY SINE Alu -9 302 1 366 237 10 0 chr17 24717701 24717798 -64786755 + L1M4 LINE L1 5083 5180 -966 10071 22 3 205 chr17 24717803 24719491 -64785062 - SVA Other Other -5 1381 35 392 225 49 21 chr17 24719583 24719725 -64784828 + L1M4 LINE L1 5187 5332 -814 327 231 11 44 chr17 24719767 24719858 -64784695 + L1M LINE L1 5311 5398 -764 2346 96 0 3 chr17 24720017 24720318 -64784235 - AluSq SINE Alu -13 300 1 676 243 94 99 chr17 24720406 24720786 -64783767 - MLT1H1 LTR MaLR -211 379 1 1972 144 0 27 chr17 24720854 24720993 -64783560 + AluSx SINE Alu 2 143 -169 2352 92 0 0 chr17 24720993 24721285 -64783268 + AluSq SINE Alu 9 300 -13 1972 144 0 27 chr17 24721285 24721444 -64783109 + AluSx SINE Alu 143 292 -20 1665 158 6 80 chr17 24721494 24721830 -64782723 - AluJo SINE Alu -1 311 1 2205 114 0 7 chr17 24721859 24722167 -64782386 - AluSc SINE Alu -3 306 1 2325 104 0 0 chr17 24722737 24723044 -64781509 + AluSg SINE Alu 1 307 -3 660 254 208 4 chr17 24724391 24724631 -64779922 - MLT1J LTR MaLR -17 494 206 1997 151 3 3 chr17 24724640 24724938 -64779615 + AluSx SINE Alu 1 298 -14 940 169 0 24 chr17 24724938 24725104 -64779449 + AluJb SINE Alu 135 296 -16 791 176 102 53 chr17 24725115 24725302 -64779251 - MLT1J LTR MaLR -315 196 1 321 192 82 0 chr17 24725304 24725377 -64779176 + LTR67 LTR ERVL 479 557 0 935 160 11 39 chr17 24725462 24725643 -64778910 + FRAM SINE Alu 1 176 0 2370 86 3 3 chr17 24725710 24726012 -64778541 - AluSq SINE Alu -10 303 2 1424 173 107 7 chr17 24726198 24726470 -64778083 + AluJo SINE Alu 1 299 -13 1015 139 0 0 chr17 24726781 24726918 -64777635 + AluSq/x SINE Alu 1 137 -176 2129 126 3 0 chr17 24726918 24727212 -64777341 + AluSx SINE Alu 1 295 -17 825 146 0 0 chr17 24727391 24727514 -64777039 - AluSg/x SINE Alu -15 297 175 182 298 258 14 chr17 24727661 24727940 -64776613 - L2 LINE L2 -459 2855 2509 222 37 0 0 chr17 24728333 24728360 -64776193 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2167 115 0 0 chr17 24728363 24728642 -64775911 - AluSg SINE Alu -31 279 1 260 327 13 27 chr17 24728828 24728978 -64775575 - L2 LINE L2 -896 2418 2271 2912 229 109 49 chr17 24729052 24729287 -64775266 - L1M4 LINE L1 -1886 4260 4041 2164 104 0 10 chr17 24729287 24729595 -64774958 - AluSg SINE Alu -3 307 3 2237 111 3 0 chr17 24729599 24729896 -64774657 - AluSx SINE Alu -14 298 1 2912 229 109 49 chr17 24729896 24730067 -64774486 - L1M4 LINE L1 -2107 4039 3880 2361 96 3 3 chr17 24730067 24730370 -64774183 - AluSx SINE Alu -9 303 1 2912 229 109 49 chr17 24730370 24731006 -64773547 - L1M4 LINE L1 -2266 3880 3150 1671 199 0 7 chr17 24731012 24731304 -64773249 - AluJo SINE Alu -22 290 1 323 103 0 205 chr17 24731323 24731401 -64773152 - AluJ/FLAM SINE Alu -239 63 2 857 197 44 26 chr17 24731413 24731562 -64772991 - L1ME LINE L1 -4549 1531 1375 2079 113 31 7 chr17 24731562 24731853 -64772700 + AluSx SINE Alu 1 298 -14 857 197 44 26 chr17 24731853 24731931 -64772622 - L1ME LINE L1 -4705 1375 1300 2307 95 0 3 chr17 24731932 24732237 -64772316 - AluY SINE Alu -7 304 1 2239 125 0 6 chr17 24732239 24732551 -64772002 - AluSg SINE Alu 0 310 1 1659 209 148 14 chr17 24732589 24733034 -64771519 + MLT1D LTR MaLR 1 505 0 1158 237 49 84 chr17 24733034 24733168 -64771385 - L1ME LINE L1 -4981 1089 952 2269 94 34 0 chr17 24733168 24733466 -64771087 - AluSq SINE Alu -5 308 1 1158 237 49 84 chr17 24733466 24734022 -64770531 - L1ME LINE L1 -5118 952 424 292 272 116 34 chr17 24734068 24734215 -64770338 - L1ME LINE L1 -5611 459 301 355 298 143 37 chr17 24734323 24734425 -64770128 - L1ME LINE L1 -5768 302 212 369 0 0 0 chr17 24734425 24734466 -64770087 + (CA)n Simple_repeat Simple_repeat 1 41 0 355 298 143 37 chr17 24734466 24734635 -64769918 - L1ME LINE L1 -5858 212 2 1665 180 36 20 chr17 24734649 24734818 -64769735 - AluJo SINE Alu -2 310 132 2270 118 0 3 chr17 24734818 24735132 -64769421 - AluSq SINE Alu 0 313 1 1665 180 36 20 chr17 24735132 24735267 -64769286 - AluJo SINE Alu -180 132 1 2143 118 3 3 chr17 24735336 24735360 -64769193 - AluSx SINE Alu -7 305 282 189 0 0 0 chr17 24735360 24735381 -64769172 + (CATTG)n Simple_repeat Simple_repeat 3 23 0 2143 118 3 3 chr17 24735381 24735661 -64768892 - AluSx SINE Alu -29 283 1 215 103 51 0 chr17 24735661 24735700 -64768853 + T-rich Low_complexity Low_complexity 2 42 0 2190 112 3 3 chr17 24735708 24736012 -64768541 - AluSx SINE Alu -8 304 1 2081 141 3 0 chr17 24736016 24736315 -64768238 - AluSx SINE Alu -12 300 1 294 309 24 0 chr17 24736317 24736401 -64768152 + L2 LINE L2 3228 3313 0 251 303 20 0 chr17 24736402 24736501 -64768052 + L2 LINE L2 1923 2023 -1291 1768 156 42 36 chr17 24736692 24736960 -64767593 + MER2 DNA MER2_type 1 273 -72 1629 103 183 0 chr17 24736960 24737212 -64767341 - AluSx SINE Alu -14 298 1 1768 156 42 36 chr17 24737212 24737276 -64767277 + MER2 DNA MER2_type 273 335 -10 1911 163 0 0 chr17 24737302 24737597 -64766956 + AluJb SINE Alu 1 295 -17 1966 125 0 40 chr17 24737605 24737933 -64766620 + AluSx SINE Alu 1 316 0 2056 135 0 3 chr17 24738137 24738433 -64766120 + AluSx SINE Alu 1 295 -17 211 127 18 18 chr17 24738633 24738688 -64765865 + (TTA)n Simple_repeat Simple_repeat 2 56 0 1997 126 3 3 chr17 24738690 24738975 -64765578 - AluJb SINE Alu -27 285 1 2385 94 0 0 chr17 24739241 24739549 -64765004 - AluSg SINE Alu -2 308 1 2095 124 0 7 chr17 24739720 24740018 -64764535 - AluSq SINE Alu -17 296 1 497 258 69 25 chr17 24740079 24740238 -64764315 - MER117 DNA MER1_type -13 184 19 1810 165 20 3 chr17 24740281 24740578 -64763975 + AluJb SINE Alu 4 305 -7 1374 197 16 45 chr17 24740755 24741065 -64763488 - AluJb SINE Alu -11 301 1 27 49 0 0 chr17 24741242 24741283 -64763270 + AT_rich Low_complexity Low_complexity 1 41 0 2162 115 3 0 chr17 24741292 24741587 -64762966 + AluSg SINE Alu 1 296 -14 2347 98 0 0 chr17 24742016 24742312 -64762241 - AluSx SINE Alu -16 296 1 206 262 318 0 chr17 24742568 24742675 -64761878 + MIR SINE MIR 5 145 -117 201 267 0 0 chr17 24742716 24742761 -64761792 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 289 169 203 0 chr17 24742762 24742821 -64761732 + LOR1b LTR ERV1 2 72 -389 287 122 0 20 chr17 24742823 24742872 -64761681 + U6 snRNA snRNA 1 48 -59 2063 184 5 54 chr17 24742872 24742915 -64761638 + LOR1b LTR ERV1 58 102 -359 2001 128 3 38 chr17 24742915 24743235 -64761318 - AluSx SINE Alu -3 309 1 2063 184 5 54 chr17 24743235 24743401 -64761152 + LOR1b LTR ERV1 102 275 -186 2265 111 13 19 chr17 24743401 24743716 -64760837 - AluSq SINE Alu 0 313 1 2063 184 5 54 chr17 24743716 24743930 -64760623 + LOR1b LTR ERV1 275 461 0 201 246 53 0 chr17 24743940 24743997 -64760556 + MIR SINE MIR 199 258 -4 1982 124 11 14 chr17 24744029 24744335 -64760218 + AluSx SINE Alu 3 307 0 21 71 0 0 chr17 24744407 24744449 -64760104 + AT_rich Low_complexity Low_complexity 1 42 0 2140 143 3 3 chr17 24744515 24744823 -64759730 + AluSx SINE Alu 1 308 -4 1472 147 41 69 chr17 24745545 24745865 -64758688 - L1MB7 LINE L1 0 6184 5874 511 125 0 0 chr17 24745879 24745959 -64758594 - FLAM_C SINE Alu 0 143 64 2064 87 30 0 chr17 24746684 24746950 -64757603 + AluSg SINE Alu 37 310 0 24 0 0 0 chr17 24746970 24746994 -64757559 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr17 24747480 24747503 -64757050 + (CAA)n Simple_repeat Simple_repeat 2 24 0 585 91 0 0 chr17 24747503 24747580 -64756973 - AluJ/FLAM SINE Alu -234 78 2 3084 167 59 46 chr17 24747582 24748390 -64756163 - L1MB7 LINE L1 -298 5886 5090 1413 196 39 29 chr17 24748390 24748671 -64755882 + AluJb SINE Alu 5 288 -24 21 0 0 0 chr17 24748674 24748695 -64755858 + AT_rich Low_complexity Low_complexity 1 21 0 3084 167 59 46 chr17 24748695 24748992 -64755561 - L1MB7 LINE L1 -1095 5089 4739 2174 113 40 35 chr17 24748992 24749365 -64755188 + THE1C LTR MaLR 1 375 0 3084 167 59 46 chr17 24749365 24749451 -64755102 - L1MB7 LINE L1 -1445 4739 4656 438 126 6 154 chr17 24749429 24749604 -64754949 - L1MCa LINE L1 -4066 2360 2212 * 1684 180 13 19 chr17 24749614 24749925 -64754628 - AluJb SINE Alu -3 309 1 365 210 12 0 chr17 24749930 24750011 -64754542 - L1MB7 LINE L1 -1482 4944 4863 2052 128 0 3 chr17 24750011 24750307 -64754246 + AluSx SINE Alu 1 295 -17 356 57 75 0 chr17 24750308 24750361 -64754192 + L1MA5 LINE L1 6244 6300 0 284 261 0 0 chr17 24750370 24750439 -64754114 + L1M4 LINE L1 4266 4334 -1812 1861 106 4 0 chr17 24750467 24750713 -64753840 + AluSg SINE Alu 62 308 -2 969 115 0 34 chr17 24750748 24750896 -64753657 + FLAM_C SINE Alu 1 143 0 914 197 22 48 chr17 24751197 24751425 -64753128 - AluJo SINE Alu -90 222 1 771 161 0 29 chr17 24751475 24751643 -64752910 - FLAM_C SINE Alu 0 133 1 774 229 7 0 chr17 24751672 24751825 -64752728 + AluJb SINE Alu 134 287 -25 233 220 0 0 chr17 24752050 24752109 -64752444 + T-rich Low_complexity Low_complexity 1 59 0 1766 162 20 7 chr17 24752226 24752523 -64752030 - AluJo SINE Alu -11 301 1 2026 135 3 0 chr17 24752570 24752899 -64751654 - AluSx SINE Alu 0 330 1 30 59 0 0 chr17 24753000 24753051 -64751502 + AT_rich Low_complexity Low_complexity 1 51 0 1888 144 0 34 chr17 24753151 24753443 -64751110 - AluSx SINE Alu -30 282 1 29 28 0 0 chr17 24753522 24753558 -64750995 + AT_rich Low_complexity Low_complexity 1 36 0 2469 89 0 3 chr17 24754041 24754354 -64750199 + AluSx SINE Alu 1 312 0 293 216 0 0 chr17 24754429 24754480 -64750073 + MER33 DNA MER1_type 3 53 -271 1693 197 3 0 chr17 24754480 24754775 -64749778 + AluJo SINE Alu 1 296 -16 538 238 78 68 chr17 24757077 24757283 -64747270 - MLT1L LTR MaLR -55 560 353 24 0 0 0 chr17 24759427 24759451 -64745102 + AT_rich Low_complexity Low_complexity 1 24 0 515 181 16 19 chr17 24759585 24759735 -64744818 + MIR SINE MIR 33 182 -62 982 167 5 10 chr17 24760174 24760366 -64744187 + MER33 DNA MER1_type 49 239 -85 335 179 0 0 chr17 24760359 24760415 -64744138 + AluSp SINE Alu 134 189 -114 * 686 125 0 0 chr17 24760434 24760530 -64744023 + AluS SINE Alu 2 97 -216 558 67 0 0 chr17 24762970 24763045 -64741508 + (TG)n Simple_repeat Simple_repeat 2 76 0 2068 129 19 13 chr17 24763114 24763424 -64741129 + AluSx SINE Alu 1 312 0 395 105 0 7 chr17 24763432 24763493 -64741060 + Alu SINE Alu 3 55 -248 1441 201 0 19 chr17 24763494 24763762 -64740791 - AluJb SINE Alu -49 263 1 2129 135 78 66 chr17 24763910 24764242 -64740311 + MSTA LTR MaLR 1 328 -100 2348 93 0 7 chr17 24764242 24764543 -64740010 - AluY SINE Alu -11 300 2 2129 135 78 66 chr17 24764543 24764590 -64739963 + MSTA LTR MaLR 328 373 -55 2170 137 0 0 chr17 24764590 24764890 -64739663 - AluSx SINE Alu -12 300 1 2129 135 78 66 chr17 24764890 24764932 -64739621 + MSTA LTR MaLR 373 428 0 183 281 288 13 chr17 24764946 24765099 -64739454 - MIR SINE MIR -30 232 38 21 0 0 0 chr17 24765185 24765206 -64739347 + AT_rich Low_complexity Low_complexity 1 21 0 885 165 0 0 chr17 24765645 24765778 -64738775 - AluSq/x SINE Alu -179 133 1 26 30 0 0 chr17 24767003 24767036 -64737517 + AT_rich Low_complexity Low_complexity 1 33 0 2090 108 10 10 chr17 24767036 24767324 -64737229 - AluSx SINE Alu -24 288 1 306 87 0 0 chr17 24767744 24767790 -64736763 + (TG)n Simple_repeat Simple_repeat 1 46 0 1536 211 13 0 chr17 24767987 24768285 -64736268 + AluJb SINE Alu 1 302 -10 385 310 104 39 chr17 24768322 24768586 -64735967 + L1ME4a LINE L1 5257 5502 -619 2592 52 0 3 chr17 24768586 24768892 -64735661 + AluY SINE Alu 1 305 -6 385 310 104 39 chr17 24768892 24769339 -64735214 + L1ME4a LINE L1 5502 6024 -97 2388 81 7 0 chr17 24769777 24770072 -64734481 + AluY SINE Alu 1 297 -14 3535 83 26 14 chr17 24770828 24771333 -64733220 - MER9 LTR ERVK 0 511 1 184 316 13 13 chr17 24773276 24773355 -64731198 - MIR3 SINE MIR -12 196 118 204 40 0 0 chr17 24775399 24775424 -64729129 + (TCC)n Simple_repeat Simple_repeat 1 25 0 272 342 0 40 chr17 24776441 24776590 -64727963 + MER5B DNA MER1_type 3 145 -33 215 307 10 30 chr17 24776762 24776863 -64727690 - MER5B DNA MER1_type -17 161 63 1452 254 59 61 chr17 24777935 24778324 -64726229 + MER82 DNA MER2_type 199 588 -65 1982 95 84 4 chr17 24778324 24778597 -64725956 + AluSp SINE Alu 1 295 -18 1452 254 59 61 chr17 24778597 24778663 -64725890 + MER82 DNA MER2_type 588 653 0 1998 122 4 0 chr17 24778866 24779129 -64725424 - AluSq SINE Alu -49 264 1 753 233 12 6 chr17 24779669 24779832 -64724721 + FRAM SINE Alu 1 164 -2 307 143 0 14 chr17 24780374 24780444 -64724109 + L1PA16 LINE L1 6080 6148 -18 363 145 12 48 chr17 24781439 24781522 -64723031 + L1 LINE L1 5174 5253 -893 * 2860 241 52 26 chr17 24781505 24781523 -64723030 + L1M4 LINE L1 2398 2414 -3732 2027 119 3 19 chr17 24781523 24781660 -64722893 + AluSq SINE Alu 1 139 -174 2206 124 0 0 chr17 24781660 24781959 -64722594 + AluSc SINE Alu 1 299 -10 2027 119 3 19 chr17 24781959 24782132 -64722421 + AluSq SINE Alu 139 306 -7 2860 241 52 26 chr17 24782132 24783282 -64721271 + L1M4 LINE L1 2414 3503 -2643 2402 98 7 0 chr17 24783285 24783590 -64720963 + AluSp SINE Alu 1 307 -6 446 36 0 0 chr17 24783703 24783759 -64720794 + AluY SINE Alu 244 299 -12 332 136 0 15 chr17 24783759 24783825 -64720728 + (TA)n Simple_repeat Simple_repeat 1 65 0 2083 103 0 39 chr17 24783902 24784214 -64720339 - AluSx SINE Alu -12 300 1 206 254 109 0 chr17 24784214 24784269 -64720284 - MIR3 SINE MIR -28 180 120 24 0 0 0 chr17 24784765 24784789 -64719764 + AT_rich Low_complexity Low_complexity 1 24 0 233 286 40 91 chr17 24785268 24785467 -64719086 + MER5A DNA MER1_type 1 189 0 26 0 0 0 chr17 24786467 24786493 -64718060 + AT_rich Low_complexity Low_complexity 1 26 0 2328 85 41 0 chr17 24788342 24788637 -64715916 + AluSx SINE Alu 1 307 -5 618 262 285 38 chr17 24789504 24789809 -64714744 + L2 LINE L2 1820 2048 -1266 2488 73 0 3 chr17 24789809 24790111 -64714442 - AluY SINE Alu -10 301 1 618 262 285 38 chr17 24790111 24790408 -64714145 + L2 LINE L2 2048 2571 -743 307 265 88 53 chr17 24790593 24790675 -64713878 - L2 LINE L2 -15 3298 3220 2050 126 27 0 chr17 24790675 24790968 -64713585 + AluSg SINE Alu 1 301 -9 307 265 88 53 chr17 24790968 24791055 -64713498 - L2 LINE L2 -93 3220 3123 237 128 0 0 chr17 24791474 24791521 -64713032 + (A)n Simple_repeat Simple_repeat 1 47 0 1349 130 5 19 chr17 24791559 24791767 -64712786 + AluSx SINE Alu 1 205 -107 318 226 131 0 chr17 24791929 24792013 -64712540 - FLAM_A SINE Alu -8 125 31 1849 178 7 0 chr17 24792020 24792323 -64712230 - AluJb SINE Alu -7 305 1 2276 114 3 0 chr17 24792561 24792860 -64711693 - AluSx SINE Alu -11 301 2 2420 97 0 0 chr17 24792880 24793191 -64711362 - AluY SINE Alu 0 311 1 1667 81 0 43 chr17 24794503 24794737 -64709816 + AluSg/x SINE Alu 69 292 -20 2272 108 7 0 chr17 24794945 24795251 -64709302 - AluSq SINE Alu -5 308 1 2181 89 0 22 chr17 24795756 24796071 -64708482 + AluY SINE Alu 1 308 -3 2419 81 0 3 chr17 24796415 24796713 -64707840 - AluSx SINE Alu -15 297 1 2566 61 0 3 chr17 24796942 24797254 -64707299 + AluY SINE Alu 1 311 0 2281 57 0 75 chr17 24797264 24797595 -64706958 + AluY SINE Alu 1 306 -5 786 181 0 8 chr17 24797607 24797740 -64706813 + FLAM_A SINE Alu 1 132 -1 2297 107 0 0 chr17 24797859 24798158 -64706395 - AluSq SINE Alu -14 299 1 1636 164 26 51 chr17 24798215 24798483 -64706070 + AluSx SINE Alu 8 268 -44 243 0 0 0 chr17 24798483 24798510 -64706043 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1636 164 26 51 chr17 24798510 24798553 -64706000 + AluSx SINE Alu 268 311 -1 2091 149 3 0 chr17 24798814 24799122 -64705431 + AluJb SINE Alu 1 309 -3 204 269 161 47 chr17 24799240 24799389 -64705164 + L2 LINE L2 2801 2966 -348 2420 95 0 0 chr17 24799390 24799694 -64704859 - AluSc SINE Alu -5 304 1 833 130 0 36 chr17 24799809 24799947 -64704606 - L1MB8 LINE L1 -241 5937 5805 856 264 125 19 chr17 24799979 24800354 -64704199 - LTR33 LTR ERVL -62 459 45 1055 104 0 0 chr17 24800456 24800591 -64703962 - AluSq/x SINE Alu -176 137 3 1876 123 65 4 chr17 24801294 24801571 -64702982 + AluSx SINE Alu 1 294 -18 1079 136 25 0 chr17 24801572 24801734 -64702819 + AluSg/x SINE Alu 134 299 -13 209 125 0 25 chr17 24801812 24801832 -64702721 + (TAA)n Simple_repeat Simple_repeat 2 21 -19 1923 142 0 10 chr17 24801832 24802121 -64702432 + AluSx SINE Alu 1 286 -26 209 125 0 25 chr17 24802121 24802140 -64702413 + (TAA)n Simple_repeat Simple_repeat 21 40 0 985 283 80 9 chr17 24802173 24802739 -64701814 + L1ME3A LINE L1 1025 1630 -4766 2355 109 0 0 chr17 24803519 24803830 -64700723 - AluSx SINE Alu -1 311 1 266 333 58 26 chr17 24803965 24804343 -64700210 + L1ME3A LINE L1 4861 5250 -965 268 299 49 73 chr17 24804359 24804687 -64699866 + L1ME LINE L1 4496 4815 -1331 658 146 0 108 chr17 24804687 24804757 -64699796 + AluJo/FLAM SINE Alu 7 60 -252 1733 134 45 0 chr17 24804757 24805054 -64699499 - AluSg SINE Alu 0 309 1 658 146 0 108 chr17 24805054 24805111 -64699442 + AluJo/FLAM SINE Alu 60 122 -190 1632 159 7 54 chr17 24805125 24805421 -64699132 + AluJo SINE Alu 1 282 -30 484 262 52 71 chr17 24805696 24805925 -64698628 + L1ME LINE L1 5265 5487 -675 1781 144 13 23 chr17 24805925 24806224 -64698329 + AluJb SINE Alu 4 299 -13 484 262 52 71 chr17 24806224 24806314 -64698239 + L1ME LINE L1 5487 5577 -585 1346 187 106 45 chr17 24806372 24806462 -64698091 + LTR38B LTR ERV1 1 84 -526 2156 127 0 0 chr17 24806462 24806753 -64697800 + AluSx SINE Alu 1 291 -21 1346 187 106 45 chr17 24806753 24807041 -64697512 + LTR38B LTR ERV1 84 402 -208 381 43 0 0 chr17 24807068 24807115 -64697438 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 2107 110 0 27 chr17 24807115 24807410 -64697143 - AluSx SINE Alu -25 287 1 2165 85 4 4 chr17 24807470 24807793 -64696760 - AluY SINE Alu 0 323 1 1347 294 42 7 chr17 24808015 24808471 -64696082 + L1ME3A LINE L1 5482 5953 -286 567 129 0 0 chr17 24808471 24808564 -64695989 + LTR9B LTR ERV1 468 560 -84 2169 114 0 7 chr17 24808844 24809150 -64695403 + AluSx SINE Alu 1 304 -8 3343 128 31 26 chr17 24809435 24810013 -64694540 + LTR35 LTR ERV1 38 618 0 291 353 60 9 chr17 24810013 24810129 -64694424 - MER91A DNA MER1_type -27 169 48 1614 164 73 4 chr17 24810764 24810876 -64693677 + AluJo SINE Alu 7 110 -202 306 0 0 0 chr17 24810876 24810910 -64693643 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1614 164 73 4 chr17 24810910 24811071 -64693482 + AluJo SINE Alu 110 299 -13 481 81 32 0 chr17 24811520 24811582 -64692971 + AluSp/q SINE Alu 166 229 -84 180 0 0 0 chr17 24811594 24811614 -64692939 + (A)n Simple_repeat Simple_repeat 1 20 0 1912 147 26 16 chr17 24811910 24812217 -64692336 + AluSg SINE Alu 1 310 0 452 200 67 0 chr17 24813784 24813874 -64690679 - MER45A DNA AcHobo -52 126 31 1705 185 119 29 chr17 24814087 24814508 -64690045 - LTR2B LTR ERV1 0 490 32 767 197 0 44 chr17 24814607 24814744 -64689809 - FLAM_A SINE Alu -1 132 2 214 358 108 8 chr17 24814762 24814882 -64689671 - MIR3 SINE MIR -7 201 70 703 176 59 17 chr17 24815293 24815412 -64689141 + FLAM_C SINE Alu 1 124 -9 3311 140 14 31 chr17 24816018 24816591 -64687962 + L1MB1 LINE L1 5367 5929 -239 8836 126 50 8 chr17 24816617 24817970 -64686583 - THE1C-int LTR MaLR -170 1410 1 1704 117 53 148 chr17 24817972 24818384 -64686169 - THE1C LTR MaLR -2 373 1 1107 109 81 101 chr17 24818385 24818517 -64686036 + L1MB1 LINE L1 5926 6052 -116 1365 98 57 0 chr17 24818517 24818710 -64685843 + L1PA16 LINE L1 5953 6157 -9 1107 109 81 101 chr17 24818710 24818825 -64685728 + L1MB1 LINE L1 6052 6168 0 699 222 28 77 chr17 24819025 24819174 -64685379 + MIR SINE MIR 51 186 -76 2280 108 3 3 chr17 24819174 24819481 -64685072 + AluSx SINE Alu 1 307 -5 699 222 28 77 chr17 24819481 24819552 -64685001 + MIR SINE MIR 186 259 -3 1924 246 68 56 chr17 24819810 24820151 -64684402 - L1M4 LINE L1 -2030 4116 3781 2237 78 7 0 chr17 24820151 24820462 -64684091 + AluSp SINE Alu 1 313 0 1924 246 68 56 chr17 24820462 24821027 -64683526 - L1M4 LINE L1 -2365 3781 3198 749 292 97 58 chr17 24821029 24822063 -64682490 - L1ME LINE L1 -4669 1938 829 280 253 71 29 chr17 24822286 24822444 -64682109 + L1M LINE L1 5262 5399 -747 242 267 136 45 chr17 24823061 24823237 -64681316 + LTR67 LTR ERVL 358 549 -8 376 254 15 90 chr17 24823432 24823566 -64680987 - L2 LINE L2 -1 3312 3189 195 69 0 0 chr17 24823638 24823667 -64680886 + (CA)n Simple_repeat Simple_repeat 2 30 0 2497 69 3 0 chr17 24824281 24824584 -64679969 - AluY SINE Alu -7 304 1 1218 104 115 0 chr17 24825278 24825460 -64679093 - AluSp SINE Alu -110 203 1 4295 149 22 40 chr17 24825460 24825783 -64678770 - L1MB8 LINE L1 -106 6072 5745 1805 148 46 0 chr17 24825783 24826066 -64678487 - AluSx SINE Alu -16 296 1 4295 149 22 40 chr17 24826066 24826419 -64678134 - L1MB8 LINE L1 -433 5745 5387 1638 197 41 49 chr17 24826419 24826785 -64677768 + MLT1A1 LTR MaLR 3 365 0 4295 149 22 40 chr17 24826785 24826819 -64677734 - L1MB8 LINE L1 -791 5387 5354 1933 162 3 0 chr17 24826819 24827148 -64677405 - AluSx SINE Alu 0 312 1 4295 149 22 40 chr17 24827148 24827287 -64677266 - L1MB8 LINE L1 -824 5354 5240 1520 116 93 53 chr17 24827287 24827408 -64677145 + MER44D DNA MER2_type 1 116 -2375 2198 101 0 0 chr17 24827408 24827695 -64676858 + AluSg SINE Alu 1 287 -23 1520 116 93 53 chr17 24827695 24827874 -64676679 + MER44D DNA MER2_type 116 583 -26 396 178 0 0 chr17 24827879 24827986 -64676567 + (TA)n Simple_repeat Simple_repeat 1 107 0 314 296 23 0 chr17 24827986 24828074 -64676479 - L1MC4 LINE L1 -1337 6705 6616 480 188 0 0 chr17 24828075 24828233 -64676320 + (TA)n Simple_repeat Simple_repeat 1 161 -4 1683 197 0 3 chr17 24828233 24828522 -64676031 - AluJo SINE Alu -24 288 1 480 188 0 0 chr17 24828522 24828528 -64676025 + (TA)n Simple_repeat Simple_repeat 160 165 0 282 127 0 18 chr17 24828556 24828611 -64675942 - L1M4 LINE L1 -905 5241 5188 662 204 28 7 chr17 24828614 24828756 -64675797 + MLT1A1 LTR MaLR 18 162 -203 1410 129 0 0 chr17 24828766 24828960 -64675593 - AluSx SINE Alu -117 195 2 1733 172 17 0 chr17 24829069 24829365 -64675188 - AluJb SINE Alu -10 302 2 279 163 0 0 chr17 24829368 24829417 -64675136 - L1M4 LINE L1 -860 5286 5238 25 51 0 0 chr17 24829427 24829466 -64675087 + AT_rich Low_complexity Low_complexity 1 39 0 504 273 88 36 chr17 24829467 24829717 -64674836 + L1MC4a LINE L1 5701 5965 -197 336 158 14 4 chr17 24829721 24829949 -64674604 + AluJo SINE Alu 1 313 0 1978 136 0 34 chr17 24829950 24830280 -64674273 + AluSx SINE Alu 2 321 0 572 218 83 107 chr17 24831464 24831609 -64672944 + MIR SINE MIR 5 143 -119 1685 138 8 4 chr17 24831609 24831863 -64672690 + AluSx SINE Alu 53 307 -5 572 218 83 107 chr17 24831863 24831969 -64672584 + MIR SINE MIR 143 250 -12 1842 169 3 0 chr17 24832168 24832463 -64672090 + AluJb SINE Alu 1 296 -16 2058 119 3 13 chr17 24832511 24832821 -64671732 + AluSx SINE Alu 1 307 -5 1836 192 70 36 chr17 24833701 24833773 -64670780 + L1ME3A LINE L1 5641 5709 -461 2215 130 0 0 chr17 24833773 24834080 -64670473 - AluSx SINE Alu -5 307 1 1836 192 70 36 chr17 24834080 24834475 -64670078 + L1ME3A LINE L1 5709 6124 -46 256 379 8 38 chr17 24835118 24835250 -64669303 - L3 LINE CR1 -47 1530 1403 2364 126 59 6 chr17 24835486 24835842 -64668711 + THE1C LTR MaLR 1 375 0 573 231 43 0 chr17 24836137 24836254 -64668299 - MER91C DNA MER1_type -17 123 2 2026 133 3 0 chr17 24836561 24837027 -64667526 + AluSx SINE Alu 1 467 0 824 171 34 0 chr17 24837032 24837178 -64667375 + AluJb SINE Alu 137 287 -25 2053 86 7 17 chr17 24837192 24837484 -64667069 + L1PA13 LINE L1 5541 5829 -334 2226 120 0 0 chr17 24837484 24837784 -64666769 + AluSq SINE Alu 1 300 -13 3141 62 12 209 chr17 24838376 24838508 -64666045 + L1PA16 LINE L1 5353 5509 -657 1816 136 14 18 chr17 24838508 24838794 -64665759 - AluJo SINE Alu -21 291 7 3141 62 12 209 chr17 24838794 24838845 -64665708 + L1PA16 LINE L1 5509 5568 -598 2138 112 3 3 chr17 24838845 24839140 -64665413 + AluSx SINE Alu 1 295 -17 3141 62 12 209 chr17 24839140 24839153 -64665400 + L1PA16 LINE L1 5568 5582 -584 3141 125 17 25 chr17 24839153 24839433 -64665120 + L1PA16 LINE L1 5690 5967 -199 1981 109 25 0 chr17 24839433 24839741 -64664812 + AluSx SINE Alu 1 315 0 3141 125 17 25 chr17 24839741 24839939 -64664614 + L1PA16 LINE L1 5967 6165 -1 2138 109 11 0 chr17 24840130 24840414 -64664139 + AluSq SINE Alu 1 287 -26 28 0 0 0 chr17 24840421 24840449 -64664104 + AT_rich Low_complexity Low_complexity 1 28 0 235 114 0 0 chr17 24840922 24840957 -64663596 + Alu SINE Alu 29 63 -237 2829 209 58 6 chr17 24841059 24841392 -64663161 + L1MB7 LINE L1 3543 3857 -2289 2348 103 0 6 chr17 24841392 24841703 -64662850 + AluY SINE Alu 1 309 -2 2829 209 58 6 chr17 24841703 24842045 -64662508 + L1MB7 LINE L1 3857 4253 -1893 1641 215 36 34 chr17 24842043 24842461 -64662092 + L1MB7 LINE L1 4879 5297 -849 * 4028 180 65 40 chr17 24842753 24843670 -64660883 + L1MB7 LINE L1 5256 6177 -7 227 306 56 28 chr17 24843681 24843825 -64660728 + L1MC4a LINE L1 6058 6205 -1603 342 273 30 30 chr17 27845155 27845287 -61659266 + L1MEc LINE L1 153 284 -6112 422 294 18 54 chr17 27845290 27845511 -61659042 + L1M4 LINE L1 4880 5092 -1054 342 337 156 25 chr17 27845639 27845838 -61658715 + L1MEc LINE L1 1046 1270 -4935 663 171 36 0 chr17 27846480 27846591 -61657962 - AluJb SINE Alu -195 117 3 25 51 0 0 chr17 27847590 27847629 -61656924 + AT_rich Low_complexity Low_complexity 1 39 0 2314 100 3 0 chr17 27847900 27848210 -61656343 - AluY SINE Alu 0 311 1 405 243 0 78 chr17 27848423 27848526 -61656027 + MER21B LTR ERV1 1 95 -768 474 252 19 19 chr17 27848530 27848637 -61655916 + MER21B LTR ERV1 18 124 -739 864 153 0 0 chr17 27848758 27848928 -61655625 + (GAATG)n Satellite Satellite 5 174 0 821 150 0 6 chr17 27848998 27849165 -61655388 + (GAATG)n Satellite Satellite 5 170 0 382 127 32 0 chr17 27849176 27849239 -61655314 + AluJ/FRAM SINE Alu 225 289 -13 1035 139 0 0 chr17 27849239 27849302 -61655251 + (GAGTG)n Simple_repeat Simple_repeat 1 243 0 1035 139 0 0 chr17 27849302 27849482 -61655071 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 1032 133 0 0 chr17 27849492 27849672 -61654881 + (GAATG)n Simple_repeat Simple_repeat 1 180 0 323 191 16 0 chr17 27849709 27849772 -61654781 + AluJ/FRAM SINE Alu 225 288 -14 1239 89 0 0 chr17 27849794 27849973 -61654580 + (GAATG)n Satellite Satellite 2 180 0 476 107 71 0 chr17 27849976 27850088 -61654465 - HSATII Satellite Satellite -4 166 47 1053 113 0 0 chr17 27850097 27850274 -61654279 + (GAATG)n Satellite Satellite 1 177 0 245 222 32 0 chr17 27850286 27850349 -61654204 + AluJ/FRAM SINE Alu 225 289 -13 419 179 0 8 chr17 27850349 27850466 -61654087 + (GAATG)n Simple_repeat Simple_repeat 1 116 0 891 161 0 0 chr17 27850471 27850651 -61653902 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 201 147 0 0 chr17 27850768 27850802 -61653751 + (GAGTG)n Simple_repeat Simple_repeat 1 34 0 1041 128 0 0 chr17 27850802 27850922 -61653631 + (GAGTG)n Simple_repeat Simple_repeat 1 300 0 1041 128 0 0 chr17 27850922 27851102 -61653451 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 358 162 44 0 chr17 27851174 27851242 -61653311 + AluJ/FRAM SINE Alu 225 295 -7 1197 123 4 7 chr17 27851242 27851690 -61652863 + (GAATG)n Satellite Satellite 1 447 0 244 222 48 0 chr17 27851702 27851765 -61652788 + AluJ/FRAM SINE Alu 225 290 -12 650 171 14 0 chr17 27851788 27851934 -61652619 + (GAATG)n Simple_repeat Simple_repeat 2 149 0 377 159 16 0 chr17 27851934 27851997 -61652556 + AluJ/FRAM SINE Alu 225 288 -14 927 161 0 0 chr17 27852045 27852225 -61652328 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 1032 149 0 0 chr17 27852213 27852494 -61652059 + (GAATG)n Satellite Satellite 1 281 0 810 180 0 0 chr17 27852506 27852684 -61651869 + (GAATG)n Satellite Satellite 2 179 0 369 230 21 4 chr17 27852684 27852784 -61651769 + AluSc SINE Alu 223 285 -14 245 95 0 24 chr17 27852784 27852826 -61651727 + (GAATG)n Simple_repeat Simple_repeat 1 41 0 1041 145 0 0 chr17 27852827 27853196 -61651357 + (GAGTG)n Simple_repeat Simple_repeat 1 369 0 233 69 0 0 chr17 27853197 27853226 -61651327 + (GAATG)n Simple_repeat Simple_repeat 1 29 0 309 238 32 0 chr17 27853226 27853316 -61651237 + AluJ/FRAM SINE Alu 226 288 -14 888 150 6 0 chr17 27853338 27853661 -61650892 + (GAATG)n Satellite Satellite 1 325 0 226 264 44 0 chr17 27855114 27855205 -61649348 - LTR48 LTR ERV1 -48 739 645 214 136 17 17 chr17 27855205 27855264 -61649289 + (TA)n Simple_repeat Simple_repeat 1 59 0 1447 183 89 57 chr17 27855298 27855680 -61648873 - LTR49 LTR ERV1 -168 427 30 1934 137 7 0 chr17 27855680 27855958 -61648595 + AluSq SINE Alu 14 293 -20 1447 183 89 57 chr17 27855958 27855979 -61648574 - LTR49 LTR ERV1 -565 30 11 225 0 0 0 chr17 27856105 27856130 -61648423 + (TG)n Simple_repeat Simple_repeat 2 26 0 25 31 0 0 chr17 27856687 27856719 -61647834 + AT_rich Low_complexity Low_complexity 1 32 0 462 245 144 11 chr17 27856969 27857157 -61647396 + MER20 DNA MER1_type 4 216 -3 1753 185 66 12 chr17 27857275 27857717 -61646836 - LTR56 LTR ERV1 0 437 1 2256 178 105 13 chr17 27857902 27858446 -61646107 - LTR49 LTR ERV1 -1 594 1 25 51 0 0 chr17 27858991 27859030 -61645523 + AT_rich Low_complexity Low_complexity 1 39 0 187 152 43 0 chr17 27859221 27859267 -61645286 + (TA)n Simple_repeat Simple_repeat 2 49 0 26 0 0 0 chr17 27859486 27859512 -61645041 + AT_rich Low_complexity Low_complexity 1 26 0 1445 240 46 10 chr17 27860316 27860732 -61643821 - MER54A LTR ERVL 0 901 471 2201 112 74 15 chr17 27860769 27861107 -61643446 - THE1B LTR MaLR 0 364 7 1625 211 51 2 chr17 27861116 27861509 -61643044 - MER54A LTR ERVL -489 412 1 22 0 0 0 chr17 27862679 27862701 -61641852 + AT_rich Low_complexity Low_complexity 1 22 0 1409 208 0 35 chr17 27862701 27862989 -61641564 - AluJb SINE Alu -24 288 11 1306 251 49 59 chr17 27863977 27864209 -61640344 - MLT1D LTR MaLR 0 505 272 2102 121 7 7 chr17 27864209 27864515 -61640038 - AluSc SINE Alu -1 308 3 1306 251 49 59 chr17 27864515 27864788 -61639765 - MLT1D LTR MaLR -233 272 5 21 0 0 0 chr17 27864848 27864869 -61639684 + AT_rich Low_complexity Low_complexity 1 21 0 819 196 17 13 chr17 27864914 27865482 -61639071 + GA-rich Low_complexity Low_complexity 1 570 0 459 249 18 6 chr17 27865655 27865824 -61638729 + GA-rich Low_complexity Low_complexity 3 173 0 805 263 46 19 chr17 27865926 27866295 -61638258 - L1MCa LINE L1 -3518 2908 2530 423 287 86 29 chr17 27866335 27866509 -61638044 - L1MCa LINE L1 -4990 1436 1253 1396 238 3 7 chr17 27866744 27867038 -61637515 - MLT1A1 LTR MaLR 0 365 73 316 331 68 0 chr17 27867447 27867595 -61636958 - L1MC/D LINE L1 -768 5474 5317 242 194 42 28 chr17 27867777 27867849 -61636704 - L1MC/D LINE L1 -1109 5037 4965 1185 235 165 34 chr17 27867870 27868313 -61636240 - L1MB5 LINE L1 -9 6165 5665 478 279 34 39 chr17 27868319 27868655 -61635898 + L1M4c LINE L1 1518 1864 -4535 2087 113 3 0 chr17 27868701 27868983 -61635570 + AluY SINE Alu 1 283 -28 606 289 95 10 chr17 27869416 27869790 -61634763 + L1M4c LINE L1 2336 2694 -3688 1968 196 106 12 chr17 27869793 27870217 -61634336 + MLT1C LTR MaLR 4 467 0 358 291 97 20 chr17 27870271 27870467 -61634086 + L1M4 LINE L1 8 218 -6324 297 287 17 20 chr17 27870791 27870918 -61633635 + L1M4 LINE L1 610 929 -5717 1442 229 90 24 chr17 27871096 27871783 -61632770 + L1M4 LINE L1 820 1529 -5022 261 250 8 15 chr17 27871813 27871945 -61632608 + CT-rich Low_complexity Low_complexity 1 131 0 22 35 0 0 chr17 27872235 27872264 -61632289 + AT_rich Low_complexity Low_complexity 1 29 0 546 306 123 35 chr17 27872701 27873074 -61631479 - L2 LINE L2 -499 2815 2410 551 283 58 26 chr17 27874354 27874545 -61630008 + HERVL LTR ERVL 2267 2463 -3191 301 183 17 0 chr17 27876414 27876474 -61628079 - MIR3 SINE MIR -53 155 95 1222 169 68 0 chr17 27876985 27877222 -61627331 + AluJo SINE Alu 58 310 -2 1328 104 0 16 chr17 27877330 27877523 -61627030 + MER30B DNA MER1_type 1 190 0 725 165 0 0 chr17 27877898 27878013 -61626540 + FLAM_C SINE Alu 1 115 -18 26 0 0 0 chr17 27878015 27878041 -61626512 + AT_rich Low_complexity Low_complexity 1 26 0 240 184 333 35 chr17 27878533 27878620 -61625933 - MER103 DNA DNA -46 120 8 543 43 110 55 chr17 27878915 27879079 -61625474 + (AAATG)n Simple_repeat Simple_repeat 5 177 0 651 58 116 0 chr17 27879129 27879284 -61625269 + (AAATG)n Simple_repeat Simple_repeat 5 177 0 774 69 117 16 chr17 27879298 27880146 -61624407 + (AAATG)n Simple_repeat Simple_repeat 1 933 0 1672 137 88 21 chr17 27880284 27880613 -61623940 + Tigger2 DNA MER2_type 2358 2708 -10 22 56 0 0 chr17 27880839 27880875 -61623678 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr17 27881493 27881528 -61623025 + AT_rich Low_complexity Low_complexity 1 35 0 186 43 0 0 chr17 27882395 27882418 -61622135 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 21 0 0 0 chr17 27882697 27882718 -61621835 + AT_rich Low_complexity Low_complexity 1 21 0 2150 122 0 3 chr17 27882787 27883091 -61621462 - AluSx SINE Alu -7 305 3 404 343 88 20 chr17 27883354 27883707 -61620846 - L1MEd LINE L1 -3303 2826 2450 257 155 17 0 chr17 27883716 27883774 -61620779 + (TG)n Simple_repeat Simple_repeat 2 60 0 360 0 0 0 chr17 27884131 27884171 -61620382 + (TA)n Simple_repeat Simple_repeat 1 40 0 2120 108 0 13 chr17 27884297 27884604 -61619949 + AluSg SINE Alu 1 303 -7 295 325 103 32 chr17 27885061 27885803 -61618750 - L1MEd LINE L1 -4886 1233 530 21 36 0 0 chr17 27887722 27887750 -61616803 + AT_rich Low_complexity Low_complexity 1 28 0 226 218 0 73 chr17 27888109 27888164 -61616389 - LTR16C LTR ERVL -358 133 83 241 346 0 0 chr17 27890671 27890752 -61613801 + (CA)n Simple_repeat Simple_repeat 2 82 0 32 0 0 0 chr17 27890942 27890974 -61613579 + AT_rich Low_complexity Low_complexity 1 32 0 1690 198 24 0 chr17 27891026 27891365 -61613188 + MER7A DNA MER2_type 2 346 0 607 255 102 45 chr17 27891984 27892264 -61612289 - MER77 LTR ERV1 -6 599 323 33 43 0 0 chr17 27892382 27892429 -61612124 + AT_rich Low_complexity Low_complexity 1 47 0 4556 257 66 17 chr17 27892438 27894235 -61610318 + L1MB5 LINE L1 3565 5445 -729 1858 205 42 7 chr17 27894251 27894685 -61609868 + L1MB5 LINE L1 5562 6010 -164 261 154 123 31 chr17 27895335 27895400 -61609153 + MIR SINE MIR 87 157 -105 854 313 92 17 chr17 27896069 27896602 -61607951 + L1ME1 LINE L1 5585 6157 -9 246 288 36 18 chr17 27896837 27896948 -61607605 + (CAGA)n Simple_repeat Simple_repeat 3 115 0 471 35 0 0 chr17 27898153 27898210 -61606343 + (TG)n Simple_repeat Simple_repeat 2 58 0 917 120 0 0 chr17 27899383 27899508 -61605045 - FLAM_C SINE Alu -18 125 1 776 222 97 37 chr17 27899773 27899989 -61604564 + MER58B DNA MER1_type 113 341 0 213 116 23 23 chr17 27899989 27900032 -61604521 + L2 LINE L2 3196 3238 -75 186 224 0 0 chr17 27900077 27900126 -61604427 + (TGGA)n Simple_repeat Simple_repeat 4 52 0 1432 153 55 0 chr17 27900584 27900839 -61603714 + MLT1B LTR MaLR 1 269 -121 1207 263 27 0 chr17 27900855 27901156 -61603397 + ERVL LTR ERVL 4334 4642 -1122 261 281 52 0 chr17 27901321 27901417 -61603136 + MLT1D LTR MaLR 1 101 -404 960 212 81 101 chr17 27901517 27901888 -61602665 + MLT1D LTR MaLR 97 505 0 304 225 297 0 chr17 27902395 27902506 -61602047 + MLT1E1 LTR MaLR 8 151 -503 292 250 24 0 chr17 27902513 27902597 -61601956 + MLT1E1 LTR MaLR 291 376 -278 247 171 0 0 chr17 27902604 27902645 -61601908 - L1M4 LINE L1 -2572 3574 3534 2746 141 19 2 chr17 27902647 27903072 -61601481 + MSTB1 LTR MaLR 1 432 0 2932 177 4 15 chr17 27903084 27903626 -61600927 - L1MB4 LINE L1 -256 5924 5389 186 43 0 0 chr17 27904473 27904496 -61600057 + (TATG)n Simple_repeat Simple_repeat 2 24 0 234 23 70 0 chr17 27905695 27905738 -61598815 + (CAAA)n Simple_repeat Simple_repeat 4 49 0 993 267 103 58 chr17 27906436 27906493 -61598060 + L1M4 LINE L1 4644 4697 -1449 1763 158 52 0 chr17 27906493 27906784 -61597769 + AluSx SINE Alu 1 306 -6 993 267 103 58 chr17 27906784 27907347 -61597206 + L1M4 LINE L1 4697 5292 -854 351 0 0 0 chr17 27909096 27909135 -61595418 + (CA)n Simple_repeat Simple_repeat 2 40 0 502 331 49 25 chr17 27909139 27909710 -61594843 + L1MC4 LINE L1 4723 5307 -839 486 281 153 17 chr17 27910221 27910573 -61593980 + MLT1H1 LTR MaLR 34 433 -122 2190 153 71 19 chr17 27912174 27912585 -61591968 + MSTB1 LTR MaLR 1 432 0 15643 109 36 10 chr17 27913133 27913450 -61591103 - Tigger1 DNA MER2_type 0 2418 2111 1894 154 22 19 chr17 27913450 27913761 -61590792 - AluJo SINE Alu 0 312 1 15643 109 36 10 chr17 27913761 27915760 -61588793 - Tigger1 DNA MER2_type -307 2111 42 1311 218 48 36 chr17 27916413 27916628 -61587925 + MER65C LTR ERV1 100 322 -139 5736 100 12 16 chr17 27916628 27917783 -61586770 - L1PA14 LINE L1 0 6161 5007 2192 151 0 23 chr17 27917783 27918128 -61586425 - MER1B DNA MER1_type 0 337 1 5736 100 12 16 chr17 27918128 27918497 -61586056 - L1PA14 LINE L1 -1154 5007 4638 1311 218 48 36 chr17 27918497 27918639 -61585914 + MER65C LTR ERV1 322 461 0 1477 159 41 57 chr17 27921637 27921952 -61582601 + AluJo SINE Alu 3 312 0 419 275 6 33 chr17 27922652 27922834 -61581719 + (TATG)n Simple_repeat Simple_repeat 4 180 0 * 488 322 0 6 chr17 27922723 27922903 -61581650 + (TG)n Simple_repeat Simple_repeat 2 180 0 215 359 0 9 chr17 27922864 27922970 -61581583 + (TATG)n Simple_repeat Simple_repeat 2 106 0 * 23379 38 1 1 chr17 27923813 27927413 -61577140 + L1PA3 LINE L1 2555 6155 0 1722 207 30 62 chr17 27927420 27927457 -61577096 + L1MC4 LINE L1 5313 5350 -824 2011 129 0 7 chr17 27927457 27927744 -61576809 + AluSc SINE Alu 6 290 -19 1722 207 30 62 chr17 27927744 27928480 -61576073 + L1MC4 LINE L1 5350 5665 -509 * 2033 181 9 48 chr17 27928150 27928604 -61575949 + L1MB4 LINE L1 5693 6128 -52 231 204 0 0 chr17 27929473 27929522 -61575031 - MIR SINE MIR -56 206 158 2781 43 26 3 chr17 27929537 27929883 -61574670 - L1PA7 LINE L1 -30 6124 5771 1548 180 183 3 chr17 27930076 27930426 -61574127 - LOR1b LTR ERV1 0 461 49 1619 135 19 52 chr17 27930891 27931158 -61573395 - AluSq SINE Alu -17 296 39 514 231 0 10 chr17 27931158 27931262 -61573291 - FLAM_A SINE Alu -27 115 13 240 300 0 12 chr17 27931291 27931371 -61573182 + L1ME1 LINE L1 3492 3570 -2576 2012 247 59 44 chr17 27931562 27932312 -61572241 + L1ME1 LINE L1 5405 6165 -1 284 260 13 0 chr17 27933241 27933318 -61571235 + L1ME3A LINE L1 5885 5962 -208 1869 166 0 7 chr17 27933327 27933629 -61570924 + AluSx SINE Alu 1 300 -12 418 157 147 10 chr17 27933640 27933742 -61570811 + L1MA4A LINE L1 6035 6150 -153 1454 206 29 7 chr17 27933743 27934019 -61570534 - AluJo SINE Alu -30 282 1 410 231 0 0 chr17 27934286 27934364 -61570189 + AluJ/FLAM SINE Alu 2 79 -233 1605 246 50 4 chr17 27934365 27934841 -61569712 + L1M4 LINE L1 4855 5352 -794 1845 197 50 134 chr17 27934852 27934919 -61569634 + L1MB7 LINE L1 5040 5111 -1067 2103 121 0 0 chr17 27934919 27935236 -61569317 + AluY SINE Alu 1 311 0 1845 197 50 134 chr17 27935236 27935607 -61568946 + L1MB7 LINE L1 5111 5511 -667 1527 172 3 42 chr17 27935607 27935892 -61568661 + AluJb SINE Alu 22 295 -17 1845 197 50 134 chr17 27935892 27936443 -61568110 + L1MB7 LINE L1 5511 5943 -235 349 232 49 0 chr17 27936511 27936593 -61567960 + L1MB7 LINE L1 6090 6175 -9 1411 224 27 10 chr17 27938474 27938768 -61565785 + AluJo SINE Alu 1 299 -13 935 223 131 14 chr17 27938887 27939170 -61565383 + MER33 DNA MER1_type 8 323 -1 472 232 54 9 chr17 27939816 27939928 -61564625 - Tigger1 DNA MER2_type 0 2418 2302 * 1642 169 30 7 chr17 27939926 27940228 -61564325 - Tigger1 DNA MER2_type -374 2044 1736 1908 121 4 4 chr17 27940250 27940514 -61564039 - AluSp SINE Alu -31 282 19 3032 125 18 41 chr17 27940592 27940862 -61563691 - Tigger1 DNA MER2_type -670 1748 1473 1839 168 14 0 chr17 27940862 27941153 -61563400 - AluSg SINE Alu -15 295 1 3032 125 18 41 chr17 27941153 27941187 -61563366 - Tigger1 DNA MER2_type -945 1473 1440 1206 228 13 45 chr17 27941187 27941499 -61563054 + AluJb SINE Alu 1 302 -10 3032 125 18 41 chr17 27941499 27941705 -61562848 - Tigger1 DNA MER2_type -978 1440 1249 24537 75 5 2 chr17 27941711 27944895 -61559658 + L1P LINE L1 7 3199 -2947 37627 50 6 7 chr17 27944995 27948905 -61555648 + L1M LINE L1 600 4505 -1654 9409 32 11 215 chr17 27948905 27950645 -61553908 + SVA Other Other 1 1386 0 37627 50 6 7 chr17 27950645 27951462 -61553091 + L1M LINE L1 4505 5321 -838 1239 47 0 13 chr17 27951470 27951620 -61552933 + L1PA4 LINE L1 6008 6155 0 6889 155 40 3 chr17 27951620 27952807 -61551746 - Tigger1 DNA MER2_type -1160 1258 29 1953 128 20 30 chr17 27953389 27953685 -61550868 + AluSx SINE Alu 1 293 -19 1569 156 21 94 chr17 27954030 27954370 -61550183 + AluYb8 SINE Alu 1 315 -3 332 307 73 15 chr17 27954834 27955039 -61549514 - L1ME4a LINE L1 -260 5861 5645 27 29 0 0 chr17 27955349 27955383 -61549170 + AT_rich Low_complexity Low_complexity 1 34 0 8218 20 0 0 chr17 27955470 27956567 -61547986 - L1PA2 LINE L1 -5 6150 5053 27 0 0 0 chr17 27956945 27956972 -61547581 + AT_rich Low_complexity Low_complexity 1 27 0 189 154 0 0 chr17 27957359 27957398 -61547155 + CT-rich Low_complexity Low_complexity 2 40 0 1621 229 83 44 chr17 27957889 27958310 -61546243 - L1MCa LINE L1 -5040 1386 936 2478 61 3 0 chr17 27958310 27958620 -61545933 - AluY SINE Alu 0 311 1 1621 229 83 44 chr17 27958620 27958767 -61545786 - L1MCa LINE L1 -5490 936 796 1120 181 47 0 chr17 27960376 27960569 -61543984 + AluJo SINE Alu 76 277 -35 4153 150 64 10 chr17 27960599 27961377 -61543176 + L1MA8 LINE L1 5470 6289 -2 962 130 6 0 chr17 27961528 27961705 -61542848 + (GAATG)n Satellite Satellite 3 180 0 936 143 0 0 chr17 27961725 27961893 -61542660 + (GAATG)n Satellite Satellite 5 172 0 294 182 61 0 chr17 27961904 27961970 -61542583 + AluJ/FRAM SINE Alu 225 294 -8 1074 122 0 0 chr17 27961970 27962113 -61542440 + (GAGTG)n Simple_repeat Simple_repeat 1 323 0 1074 122 0 0 chr17 27962113 27962293 -61542260 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 322 224 15 0 chr17 27962560 27962627 -61541926 + AluJ/FRAM SINE Alu 225 292 -10 250 103 0 35 chr17 27962628 27962686 -61541867 + (GAATG)n Simple_repeat Simple_repeat 1 56 0 32339 32 2 0 chr17 27962791 27966839 -61537714 + L1P1 LINE L1 1541 5594 -561 38679 44 40 2 chr17 27966939 27971737 -61532816 - L1P LINE L1 -1153 4993 13 2506 75 0 10 chr17 27972535 27972843 -61531710 + AluY SINE Alu 1 305 -6 877 244 4 21 chr17 27972845 27973079 -61531474 + AluJo SINE Alu 81 310 -2 21 36 0 0 chr17 27973130 27973158 -61531395 + AT_rich Low_complexity Low_complexity 1 28 0 1646 182 14 7 chr17 27973253 27973550 -61531003 + AluSx SINE Alu 1 299 -13 1662 222 11 3 chr17 27974686 27975033 -61529520 + L1MB3 LINE L1 5482 5831 -352 772 188 0 0 chr17 27975033 27975150 -61529403 + FLAM_C SINE Alu 1 117 -16 252 109 130 0 chr17 27975168 27975214 -61529339 + L1M3 LINE L1 5820 5871 -309 * 288 196 0 6 chr17 27975198 27975263 -61529290 + L1PB4 LINE L1 6091 6143 -13 12240 241 68 28 chr17 27975279 27978748 -61525805 + L1P4 LINE L1 116 3443 -4160 2079 128 24 0 chr17 27978748 27979045 -61525508 - AluSx SINE Alu -7 305 2 12240 241 68 28 chr17 27979045 27979648 -61524905 + L1P4 LINE L1 3443 4020 -3583 2103 114 3 3 chr17 27979648 27979937 -61524616 + AluSq SINE Alu 1 289 -24 12240 241 68 28 chr17 27979937 27981001 -61523552 + L1P4 LINE L1 4020 5040 -2563 1997 130 19 26 chr17 27981001 27981309 -61523244 + AluSq SINE Alu 4 309 -4 12240 241 68 28 chr17 27981309 27982108 -61522445 + L1P4 LINE L1 5040 7159 -444 234 243 22 39 chr17 27982323 27982504 -61522049 + (CTA)n Simple_repeat Simple_repeat 2 179 0 339 221 95 11 chr17 27982530 27982617 -61521936 + L1P5 LINE L1 5685 5782 -374 198 0 0 0 chr17 27982617 27982639 -61521914 + (TG)n Simple_repeat Simple_repeat 2 23 0 223 256 24 24 chr17 27982675 27982800 -61521753 + (TTATA)n Simple_repeat Simple_repeat 1 125 0 1195 165 27 58 chr17 27982800 27983060 -61521493 + L1MA5 LINE L1 5782 6033 -267 2249 86 10 0 chr17 27983287 27983577 -61520976 + AluY SINE Alu 1 293 -18 12668 32 6 0 chr17 27984418 27986607 -61517946 - L1PA3 LINE L1 0 6155 3958 2103 123 3 0 chr17 27986985 27987270 -61517283 - AluSg SINE Alu -20 290 5 2052 168 89 22 chr17 27987539 27987997 -61516556 - L1MA9 LINE L1 -20 6292 5804 222 150 0 0 chr17 27988004 27988044 -61516509 + (CA)n Simple_repeat Simple_repeat 1 40 0 802 248 68 0 chr17 27988084 27988245 -61516308 - AluJo SINE Alu -54 258 87 1976 131 7 0 chr17 27988245 27988520 -61516033 - AluSg SINE Alu -33 277 1 1463 235 25 16 chr17 27988521 27989020 -61515533 - L1MA9 LINE L1 -581 5722 5205 262 250 14 42 chr17 27990362 27990434 -61514119 - MIR SINE MIR -192 70 1 197 147 29 0 chr17 27991721 27991755 -61512798 + MIR SINE MIR 114 148 -60 1747 142 26 35 chr17 27991796 27992107 -61512446 + AluJo SINE Alu 4 311 -1 2183 119 3 0 chr17 27992145 27992447 -61512106 + AluSg1 SINE Alu 1 303 -6 22 0 0 0 chr17 27992447 27992469 -61512084 + AT_rich Low_complexity Low_complexity 1 22 0 3416 181 11 9 chr17 27995263 27995916 -61508637 - L1P LINE L1 -1059 5087 4434 923 225 53 15 chr17 27995915 27996339 -61508214 + L1M2 LINE L1 5096 5667 -624 * 4163 142 12 21 chr17 27996119 27996844 -61507709 + L1PA15 LINE L1 5446 6164 -1 714 262 71 33 chr17 27996864 27997074 -61507479 - MIR SINE MIR -44 218 1 203 333 35 11 chr17 27997112 27997193 -61507360 - MIR SINE MIR -22 240 158 517 319 39 9 chr17 27997193 27997422 -61507131 + MIR SINE MIR 2 237 -25 1503 203 0 22 chr17 27998871 27999186 -61505367 + AluJo SINE Alu 1 308 -4 513 235 35 0 chr17 28001425 28001540 -61503013 - MER3 DNA MER1_type -74 135 17 1587 199 3 29 chr17 28003377 28003693 -61500860 + AluJb SINE Alu 1 308 -4 1486 241 177 21 chr17 28004175 28004785 -61499768 + L2 LINE L2 1889 2593 -721 341 264 36 18 chr17 28006488 28006598 -61497955 + MIR SINE MIR 95 206 -56 215 331 91 26 chr17 28006676 28006775 -61497778 - L3 LINE CR1 -208 1369 1278 2019 132 0 7 chr17 28006775 28007056 -61497497 + AluSc SINE Alu 1 279 -30 612 62 0 0 chr17 28007056 28007137 -61497416 + (TA)n Simple_repeat Simple_repeat 1 81 0 215 331 91 26 chr17 28007137 28007190 -61497363 - L3 LINE CR1 -298 1279 1206 237 280 19 9 chr17 28007624 28007731 -61496822 + L1MC5 LINE L1 7817 7924 -37 1661 170 13 16 chr17 28007771 28008083 -61496470 + AluJo SINE Alu 1 311 -1 188 35 35 0 chr17 28008628 28008657 -61495896 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 8444 202 90 43 chr17 28010480 28013242 -61491311 + L1 LINE L1 2219 4849 -1297 2260 110 0 0 chr17 28013242 28013534 -61491019 + AluY SINE Alu 1 292 -19 8444 202 90 43 chr17 28013534 28013578 -61490975 + L1 LINE L1 4849 4889 -1257 2049 135 0 3 chr17 28013578 28013867 -61490686 + AluY SINE Alu 1 288 -23 8444 202 90 43 chr17 28013867 28014024 -61490529 + L1 LINE L1 4889 5323 -823 231 366 0 0 chr17 28014942 28015035 -61489518 + CT-rich Low_complexity Low_complexity 1 93 0 409 265 104 51 chr17 28016106 28016754 -61487799 + HSREP522 Satellite telomeric 1 682 -286 210 224 26 26 chr17 28017957 28018033 -61486520 + CT-rich Low_complexity Low_complexity 3 78 0 186 191 0 0 chr17 28018039 28018081 -61486472 + T-rich Low_complexity Low_complexity 3 44 0 790 89 122 0 chr17 28018247 28018370 -61486183 - MER85 DNA T2_type -1 138 1 1068 209 26 29 chr17 28019408 28019681 -61484872 + LOR1-int LTR ERV1 2081 2352 -3594 825 151 47 31 chr17 28019669 28019903 -61484650 + LOR1-int LTR ERV1 1829 2572 -2443 * 2033 180 65 4 chr17 28019904 28020364 -61484189 + LOR1-int LTR ERV1 2743 3230 -2716 2406 194 16 30 chr17 28021223 28021930 -61482623 + L1MB8 LINE L1 4132 4953 -1193 1982 194 48 60 chr17 28021930 28022532 -61482021 + L1MB8 LINE L1 5584 6178 0 5277 109 10 25 chr17 28022576 28022928 -61481625 - L1PB1 LINE L1 -3 6148 5792 249 33 0 0 chr17 28022928 28022958 -61481595 + (TA)n Simple_repeat Simple_repeat 2 31 0 5277 109 10 25 chr17 28022958 28023295 -61481258 - L1PB1 LINE L1 -359 5792 5451 1585 120 117 29 chr17 28023295 28023569 -61480984 - AluSc SINE Alu -11 298 1 5277 109 10 25 chr17 28023569 28024018 -61480535 - L1PB1 LINE L1 -700 5451 5006 2249 50 0 4 chr17 28024301 28024582 -61479971 - L1PA3 LINE L1 -3 6152 5873 778 188 54 5 chr17 28025204 28025390 -61479163 + Charlie4 DNA MER1_type 62 256 -1705 40111 40 23 1 chr17 28025390 28031402 -61473151 - L1PA2 LINE L1 -7 6148 1 28 0 0 0 chr17 28031448 28031476 -61473077 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr17 28031843 28031866 -61472687 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr17 28032439 28032475 -61472078 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr17 28032579 28032609 -61471944 + AT_rich Low_complexity Low_complexity 1 30 0 3134 152 66 15 chr17 28032846 28033450 -61471103 - MER41B LTR ERV1 0 635 1 1474 196 101 39 chr17 28033590 28034028 -61470525 - LTR8A LTR ERV1 -4 723 259 1761 91 4 0 chr17 28034195 28034449 -61470104 - LTR8A LTR ERV1 -472 255 1 844 223 28 9 chr17 28035297 28035508 -61469045 - MER58A DNA MER1_type -9 215 1 282 174 43 0 chr17 28037058 28037196 -61467357 + (TA)n Simple_repeat Simple_repeat 2 145 0 333 0 0 0 chr17 28037314 28037351 -61467202 + (TG)n Simple_repeat Simple_repeat 2 38 0 304 266 7 130 chr17 28037352 28037506 -61467047 + L1MC4 LINE L1 6602 6736 -1306 415 318 0 66 chr17 28037650 28037848 -61466705 + MIR SINE MIR 28 212 -50 293 145 16 0 chr17 28037874 28037936 -61466617 + CT-rich Low_complexity Low_complexity 2 64 0 201 121 0 0 chr17 28038055 28038088 -61466465 + (T)n Simple_repeat Simple_repeat 1 33 0 216 158 0 0 chr17 28038663 28038701 -61465852 + (TA)n Simple_repeat Simple_repeat 2 39 0 30 59 0 0 chr17 28038766 28038817 -61465736 + AT_rich Low_complexity Low_complexity 1 51 0 2195 93 0 13 chr17 28040320 28040622 -61463931 + AluY SINE Alu 1 298 -13 536 242 21 67 chr17 28040901 28040944 -61463609 - MER5A DNA MER1_type -4 185 142 1869 128 31 28 chr17 28040944 28041234 -61463319 - AluSx SINE Alu -21 291 1 536 242 21 67 chr17 28041234 28041384 -61463169 - MER5A DNA MER1_type -47 142 1 256 292 329 0 chr17 28041398 28041535 -61463018 + MER5A DNA MER1_type 7 188 -1 542 323 77 38 chr17 28041824 28042655 -61461898 + MERVL LTR ERVL 4117 4998 -766 986 181 28 5 chr17 28042763 28042978 -61461575 - L1MB3 LINE L1 -46 6137 5918 1725 179 22 0 chr17 28042978 28043296 -61461257 - LOR1b LTR ERV1 0 461 137 2829 179 17 55 chr17 28043384 28043772 -61460781 - L1MB3 LINE L1 -249 5922 5570 1243 158 29 0 chr17 28043772 28044012 -61460541 - L1MA8 LINE L1 -18 6273 6027 2829 179 17 55 chr17 28044012 28044314 -61460239 - L1MB3 LINE L1 -601 5570 5258 26 64 0 0 chr17 28044383 28044430 -61460123 + AT_rich Low_complexity Low_complexity 1 47 0 720 238 38 0 chr17 28044486 28044501 -61460052 + L1 LINE L1 4232 4245 -1901 1527 115 26 9 chr17 28044501 28044727 -61459826 - MER30 DNA MER1_type 0 230 1 720 238 38 0 chr17 28044727 28044740 -61459813 + L1 LINE L1 4245 4256 -1890 312 27 0 0 chr17 28044740 28044777 -61459776 + (CA)n Simple_repeat Simple_repeat 2 38 0 720 238 38 0 chr17 28044777 28044987 -61459566 + L1 LINE L1 4256 4480 -1666 24 53 0 0 chr17 28045718 28045756 -61458797 + AT_rich Low_complexity Low_complexity 1 38 0 1968 134 7 24 chr17 28046728 28047026 -61457527 + AluSx SINE Alu 1 293 -19 300 27 0 0 chr17 28047177 28047214 -61457339 + (CA)n Simple_repeat Simple_repeat 2 38 0 195 277 31 46 chr17 28047844 28047909 -61456644 - MIR SINE MIR -161 101 38 852 263 22 5 chr17 28047918 28048142 -61456411 - MLT1E LTR MaLR 0 593 366 1711 85 0 0 chr17 28049066 28049277 -61455276 - AluY SINE Alu -15 296 86 228 105 0 0 chr17 28049277 28049315 -61455238 - AluY SINE Alu -95 38 1 26 0 0 0 chr17 28050857 28050883 -61453670 + AT_rich Low_complexity Low_complexity 1 26 0 1759 151 6 35 chr17 28050883 28051194 -61453359 + AluSx SINE Alu 1 302 -10 1994 141 21 0 chr17 28051312 28051603 -61452950 + AluSx SINE Alu 1 297 -15 269 146 11 67 chr17 28052650 28052739 -61451814 + GA-rich Low_complexity Low_complexity 1 84 0 761 214 82 0 chr17 28053033 28053215 -61451338 + MER6B DNA MER2_type 1 197 -13 278 115 19 0 chr17 28053223 28053275 -61451278 + (CA)n Simple_repeat Simple_repeat 2 54 0 3112 137 23 25 chr17 28053512 28054074 -61450479 + MER34B LTR ERV1 1 561 -4 365 189 14 0 chr17 28054622 28054696 -61449857 + MER67D LTR ERV1 5 79 -435 15750 43 3 0 chr17 28054716 28057411 -61447142 - L1PA4 LINE L1 -11 6144 3443 3205 47 4 0 chr17 28057411 28057862 -61446691 + L1PA4 LINE L1 2999 3451 -2695 1150 210 139 52 chr17 28057862 28058266 -61446287 + MER67D LTR ERV1 71 509 -5 21 0 0 0 chr17 28058316 28058337 -61446216 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr17 28059941 28059973 -61444580 + AT_rich Low_complexity Low_complexity 1 32 0 205 196 18 54 chr17 28061481 28061537 -61443016 + GA-rich Low_complexity Low_complexity 1 54 0 233 268 152 6 chr17 28062279 28062443 -61442110 + L1M4 LINE L1 4466 4653 -1493 738 286 103 15 chr17 28062476 28063134 -61441419 + L1ME2 LINE L1 3530 4245 -1901 4654 161 18 11 chr17 28063142 28064015 -61440538 + Tigger1 DNA MER2_type 10 888 -1530 6837 188 14 45 chr17 28064015 28066300 -61438253 + L1PA13 LINE L1 3886 6163 0 216 0 0 0 chr17 28066904 28066928 -61437625 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 458 233 0 130 chr17 28066942 28067157 -61437396 - MER58C DNA MER1_type -1 214 28 824 286 107 10 chr17 28067218 28067697 -61436856 + L1ME2 LINE L1 4878 5402 -744 543 259 60 42 chr17 28067695 28067911 -61436642 + L1ME2 LINE L1 5916 6135 -29 * 1835 174 10 0 chr17 28068342 28068640 -61435913 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr17 28068986 28069007 -61435546 + AT_rich Low_complexity Low_complexity 1 21 0 1879 160 35 20 chr17 28069470 28069813 -61434740 + THE1B LTR MaLR 1 348 -16 819 217 38 58 chr17 28070228 28070623 -61433930 + MLT1A2 LTR MaLR 1 457 0 210 128 0 0 chr17 28071610 28071649 -61432904 + (TG)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr17 28071958 28071980 -61432573 + AT_rich Low_complexity Low_complexity 1 22 0 16261 39 9 0 chr17 28072012 28074265 -61430288 + L1P1 LINE L1 3285 5547 -608 387 184 0 97 chr17 28074369 28074430 -61430123 - L1M4 LINE L1 -2605 3541 3494 2476 53 10 0 chr17 28074430 28074734 -61429819 - AluY SINE Alu -4 307 1 387 184 0 97 chr17 28074734 28074786 -61429767 - L1M4 LINE L1 -2652 3494 3439 2065 118 0 14 chr17 28074793 28075082 -61429471 - AluSx SINE Alu -3 309 25 402 73 0 0 chr17 28075082 28075137 -61429416 + Tigger3(Golem) DNA MER2_type 2690 2744 -285 1117 214 25 47 chr17 28075164 28075249 -61429304 - L1M4 LINE L1 -2697 3449 3364 1592 175 21 24 chr17 28075249 28075540 -61429013 + AluJo SINE Alu 1 290 -22 1117 214 25 47 chr17 28075540 28075861 -61428692 - L1M4 LINE L1 -2782 3364 3052 2310 206 43 4 chr17 28075873 28076436 -61428117 + L1ME1 LINE L1 4795 5379 -767 4934 115 35 19 chr17 28076438 28077290 -61427263 - Tigger3(Golem) DNA MER2_type 0 3029 2164 1759 209 28 73 chr17 28077290 28077855 -61426698 + L1ME1 LINE L1 5621 6160 -6 1868 184 3 0 chr17 28077855 28078165 -61426388 + AluJb SINE Alu 1 311 -1 432 230 184 20 chr17 28078353 28078549 -61426004 - MLT1H1 LTR MaLR -8 547 320 1295 177 35 131 chr17 28078644 28079102 -61425451 + MLT2D LTR ERVL 1 414 0 417 319 21 26 chr17 28079162 28079353 -61425200 - L1M4 LINE L1 -1945 4201 4012 1075 182 25 43 chr17 28079362 28079642 -61424911 + L1MA4 LINE L1 5939 6213 -87 239 0 32 0 chr17 28079645 28079676 -61424877 + (TTA)n Simple_repeat Simple_repeat 3 34 0 2785 42 0 0 chr17 28079676 28080006 -61424547 - L1PA3 LINE L1 -18 6137 5808 1998 137 3 7 chr17 28080297 28080590 -61423963 - AluSx SINE Alu -14 298 7 295 197 43 68 chr17 28080596 28080713 -61423840 - L1M4 LINE L1 -2170 3976 3863 326 333 38 12 chr17 28080754 28080994 -61423559 - L1M4 LINE L1 -2378 3768 3523 1885 189 0 3 chr17 28081039 28081509 -61423044 - AluJb SINE Alu 0 469 1 1863 164 0 22 chr17 28081509 28081827 -61422726 - AluJb SINE Alu -1 311 1 330 301 101 42 chr17 28082071 28082552 -61422001 - L1M4 LINE L1 -2924 3222 2682 2066 124 7 0 chr17 28082552 28082835 -61421718 - AluSx SINE Alu -25 287 3 330 301 101 42 chr17 28082835 28083085 -61421468 - L1M4 LINE L1 -3464 2682 2448 1786 120 0 4 chr17 28083087 28083328 -61421225 + AluSx SINE Alu 64 303 -9 341 171 0 0 chr17 28083437 28083507 -61421046 + MER96B DNA MER1_type? 296 365 -52 305 266 44 83 chr17 28083614 28083731 -61420822 + L1MC4 LINE L1 7822 7927 -115 1565 142 0 17 chr17 28083731 28083970 -61420583 + AluSx SINE Alu 1 235 -77 305 266 44 83 chr17 28083970 28084081 -61420472 + L1MC4 LINE L1 7927 8041 -1 792 141 8 0 chr17 28084531 28084652 -61419901 + MER5A DNA MER1_type 66 187 -2 183 189 27 0 chr17 28085082 28085119 -61419434 - MER5B DNA MER1_type -123 55 18 213 94 0 0 chr17 28085228 28085260 -61419293 + (CA)n Simple_repeat Simple_repeat 1 32 0 290 259 29 107 chr17 28085998 28086203 -61418350 + LTR67 LTR ERVL 2 190 -367 207 0 0 0 chr17 28086352 28086375 -61418178 + (T)n Simple_repeat Simple_repeat 1 23 0 271 185 0 0 chr17 28086423 28086477 -61418076 - L1MA7 LINE L1 -168 6123 6070 274 203 29 14 chr17 28086541 28086610 -61417943 + LTR67 LTR ERVL 488 557 0 489 285 13 13 chr17 28086684 28086835 -61417718 + MIR SINE MIR 2 152 -110 1846 163 28 0 chr17 28086856 28087145 -61417408 + AluJo SINE Alu 1 297 -15 746 201 34 45 chr17 28087145 28087324 -61417229 + AluJo/FRAM SINE Alu 134 310 -2 304 283 22 0 chr17 28087346 28087438 -61417115 + MIR SINE MIR 163 256 -6 196 200 44 22 chr17 28087677 28087722 -61416831 - L2 LINE L2 -14 3258 3213 406 337 16 94 chr17 28088086 28088469 -61416084 - L2 LINE L2 -14 3258 2906 1043 292 24 21 chr17 28088601 28088984 -61415569 - MLT1J2 LTR MaLR 0 450 67 2013 191 98 17 chr17 28089330 28089801 -61414752 + LTR22 LTR ERVK 1 509 0 234 0 0 0 chr17 28090472 28090498 -61414055 + (T)n Simple_repeat Simple_repeat 1 26 0 6190 76 22 42 chr17 28090501 28091678 -61412875 - SVA Other Other -554 1386 433 4911 88 28 55 chr17 28091880 28092701 -61411852 - SVA Other Other -519 867 68 1161 16 0 48 chr17 28092701 28092890 -61411663 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 620 168 109 22 chr17 28092993 28093130 -61411423 + FRAM SINE Alu 4 152 -24 38 22 0 0 chr17 28093512 28093557 -61410996 + AT_rich Low_complexity Low_complexity 1 45 0 1866 170 0 3 chr17 28093773 28094084 -61410469 + AluJo SINE Alu 1 310 -2 214 70 47 70 chr17 28094191 28094234 -61410319 + GA-rich Low_complexity Low_complexity 5 46 0 362 206 27 0 chr17 28094693 28094766 -61409787 - MIR SINE MIR -165 97 23 6788 70 40 0 chr17 28094929 28096496 -61408057 - L1PA7 LINE L1 -3 6151 4547 2069 171 61 9 chr17 28097794 28098234 -61406319 + MLT1D LTR MaLR 41 503 -2 1780 164 0 17 chr17 28098498 28098785 -61405768 + AluSx SINE Alu 9 290 -22 495 261 22 0 chr17 28099463 28099597 -61404956 - LTR67 LTR ERVL -13 544 408 711 271 98 8 chr17 28099980 28100216 -61404337 - MIR SINE MIR 0 262 6 210 143 0 0 chr17 28101233 28101268 -61403285 + (CATA)n Simple_repeat Simple_repeat 2 36 0 208 149 45 15 chr17 28101293 28101348 -61403205 + (TA)n Simple_repeat Simple_repeat 1 60 -9 2217 101 3 0 chr17 28101348 28101634 -61402919 - AluSg SINE Alu -23 287 1 208 149 45 15 chr17 28101634 28101645 -61402908 + (TA)n Simple_repeat Simple_repeat 60 69 0 1495 200 32 4 chr17 28101645 28101925 -61402628 - AluJo SINE Alu -24 288 1 5695 39 8 7 chr17 28101984 28102734 -61401819 + L1P LINE L1 1754 2504 -3642 476 317 77 10 chr17 28102968 28103176 -61401377 - MIR SINE MIR -29 233 12 757 238 44 20 chr17 28103356 28103608 -61400945 - MIR SINE MIR -3 259 2 188 311 0 0 chr17 28104439 28104500 -61400053 + L2 LINE L2 2866 2926 -346 2023 120 4 0 chr17 28104606 28104882 -61399671 + AluSx SINE Alu 24 300 -12 1040 184 8 5 chr17 28105590 28105716 -61398837 - ALR/Alpha Satellite centromeric -1 9504 9380 7612 76 7 14 chr17 28105716 28106730 -61397823 - LTR13 LTR ERVK 0 1007 1 1040 184 8 5 chr17 28106730 28115061 -61389492 - ALR/Alpha Satellite centromeric -125 9380 1 18776 42 1 3 chr17 28115063 28121130 -61383423 + L1PA3 LINE L1 3 6155 0 830 207 0 0 chr17 28121130 28121524 -61383029 - ALR/Alpha Satellite centromeric 0 394 1 1029 189 10 6 chr17 28121536 28122044 -61382509 - ALR/Alpha Satellite centromeric -4 14974 14469 7073 60 26 0 chr17 28122044 28122918 -61381635 + MER11D LTR ERVK 1 897 0 1029 189 10 6 chr17 28122918 28136453 -61368100 - ALR/Alpha Satellite centromeric -509 14469 1 851 197 19 7 chr17 28136468 28136753 -61367800 - ALR/Alpha Satellite centromeric -17 1881 1601 2176 112 0 3 chr17 28136753 28137073 -61367480 - AluY SINE Alu 0 311 1 851 197 19 7 chr17 28137073 28138327 -61366226 - ALR/Alpha Satellite centromeric -297 1601 1 285 51 0 0 chr17 28138334 28138373 -61366180 + (TA)n Simple_repeat Simple_repeat 1 39 0 922 190 6 3 chr17 28138391 28141480 -61363073 - ALR/Alpha Satellite centromeric 0 3097 1 11686 18 0 0 chr17 28141486 28143415 -61361138 + L1PA2 LINE L1 3961 5889 -266 971 178 12 10 chr17 28143415 28144224 -61360329 - ALR/Alpha Satellite centromeric -6 810 1 811 203 4 0 chr17 28144239 28144571 -61359982 - ALR/Alpha Satellite centromeric 0 333 1 419 297 102 33 chr17 28144757 28145269 -61359284 + SST1 Satellite centromeric 207 753 -810 241 312 52 68 chr17 28145628 28145997 -61358556 + SST1 Satellite centromeric 1132 1494 -69 188 145 40 13 chr17 28146037 28146113 -61358440 + (TG)n Simple_repeat Simple_repeat 1 78 0 611 295 112 70 chr17 28147097 28148512 -61356041 + SST1 Satellite centromeric 63 1536 -27 192 135 0 0 chr17 28148547 28148584 -61355969 + (TG)n Simple_repeat Simple_repeat 2 38 0 637 271 67 56 chr17 28149628 28150093 -61354460 + SST1 Satellite centromeric 132 601 -962 252 274 70 32 chr17 28150823 28150980 -61353573 + SST1 Satellite centromeric 1374 1536 -27 237 98 0 0 chr17 28151027 28151068 -61353485 + (TG)n Simple_repeat Simple_repeat 2 42 0 1040 194 6 2 chr17 28151692 28155482 -61349071 - ALR/Alpha Satellite centromeric 0 3804 1 4205 43 0 0 chr17 28155487 28155993 -61348560 - L1PA3 LINE L1 0 6155 5650 252 0 0 0 chr17 28206005 28206033 -61298520 + (A)n Simple_repeat Simple_repeat 1 28 0 206 274 0 41 chr17 28206041 28206114 -61298439 - MIR3 SINE MIR -46 162 93 377 272 58 0 chr17 28206229 28206332 -61298221 - L2 LINE L2 -13 3300 3192 26 0 0 0 chr17 28206403 28206429 -61298124 + AT_rich Low_complexity Low_complexity 1 26 0 931 226 107 16 chr17 28207171 28207480 -61297073 + Zaphod DNA AcHobo 3694 4030 -1 2104 147 0 3 chr17 28207726 28208038 -61296515 + AluSx SINE Alu 1 311 -1 2142 119 0 7 chr17 28208061 28208363 -61296190 + AluSg SINE Alu 1 300 -10 234 269 0 0 chr17 28208436 28208488 -61296065 + MER5A DNA MER1_type 55 106 -83 2078 126 0 0 chr17 28208501 28208778 -61295775 + AluSq SINE Alu 1 277 -36 727 191 13 13 chr17 28208878 28209030 -61295523 + L1M4 LINE L1 3544 3695 -2451 258 287 22 59 chr17 28209221 28209357 -61295196 - L1ME3A LINE L1 -9 6161 6031 1105 242 4 0 chr17 28209486 28209717 -61294836 + ERVL-F LTR ERVL 5106 5337 -427 463 130 9 157 chr17 28209713 28209760 -61294793 + ERVL-F LTR ERVL 4544 4568 -1196 * 2011 127 3 43 chr17 28209760 28210083 -61294470 - AluSx SINE Alu -1 311 2 463 130 9 157 chr17 28210083 28210143 -61294410 + ERVL-F LTR ERVL 4568 4635 -1129 923 242 118 36 chr17 28210144 28210508 -61294045 + ERVL-F LTR ERVL 5344 5737 -27 36 0 0 0 chr17 28210706 28210742 -61293811 + AT_rich Low_complexity Low_complexity 1 36 0 827 78 35 0 chr17 28210761 28210877 -61293676 - AluSq/x SINE Alu -193 120 1 1460 126 94 84 chr17 28211090 28211399 -61293154 - AluJo SINE Alu 0 312 1 206 32 32 0 chr17 28211502 28211533 -61293020 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1543 207 99 39 chr17 28211564 28212141 -61292412 + MLT2F LTR ERVL 3 660 -3 1449 118 41 0 chr17 28212239 28212460 -61292093 + MER30 DNA MER1_type 1 230 0 633 207 25 0 chr17 28212479 28212600 -61291953 - FAM SINE Alu -39 146 23 967 120 0 0 chr17 28212688 28212821 -61291732 + AluSq/x SINE Alu 1 133 -179 713 192 13 13 chr17 28212921 28213072 -61291481 + L1M4 LINE L1 3545 3695 -2451 297 248 8 43 chr17 28213148 28213265 -61291288 + L1M4 LINE L1 4517 4629 -1517 * 354 250 22 59 chr17 28213263 28213399 -61291154 - L1ME3A LINE L1 -9 6161 6031 1982 157 7 7 chr17 28213457 28213757 -61290796 + AluJb SINE Alu 1 300 -12 660 70 0 0 chr17 28214272 28214358 -61290195 + L1PA11 LINE L1 6089 6174 0 278 342 32 26 chr17 28214691 28214846 -61289707 - MLT1K LTR MaLR -215 373 218 235 143 48 0 chr17 28215480 28215522 -61289031 - MLT1L LTR MaLR -350 265 222 307 301 159 6 chr17 28215589 28215765 -61288788 - MLT1K LTR MaLR -372 216 14 374 171 107 17 chr17 28215907 28216021 -61288532 - MIR3 SINE MIR -37 171 51 2392 143 25 25 chr17 28216048 28216455 -61288098 + MLT2D LTR ERVL 1 407 -7 233 375 71 0 chr17 28216901 28217013 -61287540 + LTR67 LTR ERVL 97 216 -341 2175 101 93 6 chr17 28217021 28217366 -61287187 - THE1C LTR MaLR 0 375 1 2339 218 32 2 chr17 28217485 28217920 -61286633 - ERVL LTR ERVL -851 4913 4466 516 256 31 26 chr17 28217922 28218113 -61286440 - L1M4 LINE L1 -995 5151 4960 1075 146 6 0 chr17 28218118 28218276 -61286277 - AluJb SINE Alu -16 296 138 306 292 99 25 chr17 28218345 28218506 -61286047 - L1M4 LINE L1 -1310 4836 4664 2018 129 0 39 chr17 28218527 28218838 -61285715 + AluJb SINE Alu 1 299 -13 264 143 0 0 chr17 28219090 28219145 -61285408 + Alu SINE Alu 1 41 -260 2033 147 0 0 chr17 28219145 28219431 -61285122 + AluSx SINE Alu 11 296 -16 2262 115 3 0 chr17 28219759 28220054 -61284499 + AluSx SINE Alu 1 296 -16 217 270 126 9 chr17 28220058 28220169 -61284384 - MER5A DNA MER1_type -63 126 3 25 0 0 0 chr17 28220487 28220512 -61284041 + AT_rich Low_complexity Low_complexity 1 25 0 2810 74 6 0 chr17 28220512 28220865 -61283688 - THE1A LTR MaLR 0 355 1 2070 134 7 0 chr17 28220865 28221163 -61283390 - AluSx SINE Alu -11 301 2 825 285 104 40 chr17 28221614 28222146 -61282407 - L2 LINE L2 -9 3304 2739 468 45 30 0 chr17 28222165 28222232 -61282321 - MER41A LTR ERV1 -86 468 400 249 237 54 75 chr17 28222267 28222360 -61282193 - L2 LINE L2 -615 2699 2609 339 328 0 32 chr17 28224379 28224504 -61280049 + MIR3 SINE MIR 49 169 -39 423 121 30 0 chr17 28224956 28225022 -61279531 + AluJ/FRAM SINE Alu 232 299 -13 24 0 0 0 chr17 28225146 28225170 -61279383 + AT_rich Low_complexity Low_complexity 1 24 0 418 266 28 73 chr17 28225366 28225543 -61279010 + MIR SINE MIR 91 259 -3 1957 154 6 6 chr17 28225990 28226344 -61278209 + AluJb SINE Alu 1 354 0 258 280 0 76 chr17 28227348 28227466 -61277087 - MIR SINE MIR -55 153 50 185 154 0 26 chr17 28228476 28228515 -61276038 + L2 LINE L2 3234 3271 -1 2111 112 16 19 chr17 28228700 28229013 -61275540 + AluSx SINE Alu 1 312 0 190 283 98 11 chr17 28229695 28229787 -61274766 - MER5B DNA MER1_type -75 103 4 2047 138 0 0 chr17 28229792 28230119 -61274434 + AluSq SINE Alu 1 327 0 257 258 107 44 chr17 28230682 28230841 -61273712 + L2 LINE L2 2882 3050 -222 246 173 115 0 chr17 28231745 28231797 -61272756 - MIR SINE MIR -65 143 86 349 173 27 27 chr17 28232183 28232258 -61272295 - LTR67 LTR ERVL -479 78 4 844 196 14 0 chr17 28233299 28233466 -61271087 - AluJb SINE Alu 0 308 140 241 278 56 0 chr17 28233538 28233610 -61270943 + MLT1L LTR MaLR 209 284 -331 1942 111 80 3 chr17 28233623 28233912 -61270641 - AluSq SINE Alu -2 311 1 774 238 142 40 chr17 28234000 28234303 -61270250 - MER2 DNA MER2_type -8 337 4 762 249 26 9 chr17 28234307 28234536 -61270017 - L1MC4a LINE L1 -1854 5954 5722 235 196 0 20 chr17 28234600 28234651 -61269902 + MIR SINE MIR 85 134 -128 2205 132 30 63 chr17 28235110 28235756 -61268797 - L1MB8 LINE L1 -6 6172 5514 1126 139 43 24 chr17 28235756 28235965 -61268588 - L1PA16 LINE L1 0 6166 5954 2205 132 30 63 chr17 28235965 28236212 -61268341 - L1MB8 LINE L1 -664 5514 5261 1138 184 0 10 chr17 28236310 28236511 -61268042 + AluSx SINE Alu 1 199 -113 610 56 0 0 chr17 28236511 28236583 -61267970 + AluSq/x SINE Alu 67 138 -174 20427 105 11 12 chr17 28236604 28239570 -61264983 + L1P LINE L1 11 2971 -3175 2457 90 6 0 chr17 28239676 28239987 -61264566 - AluSp SINE Alu 0 313 1 388 220 64 50 chr17 28240024 28240165 -61264388 + HAL1 LINE L1 2364 2506 -1 646 47 0 0 chr17 28240322 28240407 -61264146 + SVA Other Other 1299 1383 -3 189 0 0 0 chr17 28240413 28240434 -61264119 + (TAAAAA)n Simple_repeat Simple_repeat 4 24 0 850 142 8 0 chr17 28240774 28240901 -61263652 + AluJb SINE Alu 166 293 -19 1855 125 10 56 chr17 28240904 28241243 -61263310 + AluSx SINE Alu 1 325 0 189 175 0 0 chr17 28241341 28241381 -61263172 + CT-rich Low_complexity Low_complexity 1 40 0 2152 109 0 0 chr17 28241403 28241679 -61262874 - AluSx SINE Alu -36 276 1 417 201 201 8 chr17 28243605 28243739 -61260814 + MIR SINE MIR 51 210 -52 196 342 43 43 chr17 28243879 28243996 -61260557 + MIR SINE MIR 47 163 -99 749 162 0 0 chr17 28244086 28244203 -61260350 + FLAM_C SINE Alu 1 117 -16 25 51 0 0 chr17 28244204 28244243 -61260310 + AT_rich Low_complexity Low_complexity 1 39 0 1132 136 12 0 chr17 28244243 28244405 -61260148 + AluSx SINE Alu 1 164 -148 192 298 0 18 chr17 28244884 28244941 -61259612 + L2 LINE L2 3214 3269 -3 2358 92 0 16 chr17 28245084 28245388 -61259165 + AluSg SINE Alu 1 299 -11 318 267 57 80 chr17 28245481 28245657 -61258896 + MIR3 SINE MIR 33 204 -4 810 148 95 12 chr17 28245773 28245913 -61258640 - Tigger7 DNA MER2_type 0 2487 2323 2099 105 46 26 chr17 28245913 28246219 -61258334 + AluSx SINE Alu 1 312 0 810 148 95 12 chr17 28246219 28246269 -61258284 - Tigger7 DNA MER2_type -164 2323 2279 1518 108 27 5 chr17 28246409 28246631 -61257922 + AluSg/x SINE Alu 69 295 -17 370 257 162 7 chr17 28246771 28246907 -61257646 - Zaphod DNA AcHobo -3773 258 102 2049 120 7 3 chr17 28247155 28247447 -61257106 - AluSx SINE Alu -19 293 1 21 57 0 0 chr17 28247450 28247485 -61257068 + AT_rich Low_complexity Low_complexity 1 35 0 306 73 0 0 chr17 28247713 28247754 -61256799 + (CA)n Simple_repeat Simple_repeat 2 42 0 1199 163 5 18 chr17 28247989 28248210 -61256343 - AluSg/x SINE Alu -7 303 86 1757 115 0 0 chr17 28248160 28248394 -61256159 - AluSq SINE Alu -10 303 70 1702 164 42 7 chr17 28249175 28249461 -61255092 - AluJb SINE Alu -16 296 1 410 41 0 0 chr17 28250789 28250838 -61253715 + MADE1 DNA Mariner 31 79 -1 2188 125 0 13 chr17 28251375 28251678 -61252875 - AluSx SINE Alu -13 299 1 21 36 0 0 chr17 28251976 28252004 -61252549 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr17 28252062 28252098 -61252455 + AT_rich Low_complexity Low_complexity 1 36 0 978 203 0 0 chr17 28252110 28252292 -61252261 + AluJo SINE Alu 123 304 -8 367 302 31 19 chr17 28252292 28252451 -61252102 + L1M4 LINE L1 4461 4621 -1525 1006 258 64 20 chr17 28252623 28253015 -61251538 - LTR16A LTR ERVL -26 424 16 758 161 0 31 chr17 28253182 28253312 -61251241 - FLAM_C SINE Alu -16 127 2 204 135 27 81 chr17 28253396 28253470 -61251083 + T-rich Low_complexity Low_complexity 5 74 0 23 0 0 0 chr17 28253832 28253855 -61250698 + AT_rich Low_complexity Low_complexity 1 23 0 2219 112 0 0 chr17 28254077 28254396 -61250157 - AluSx SINE Alu 0 319 1 26 0 0 0 chr17 28254779 28254805 -61249748 + AT_rich Low_complexity Low_complexity 1 26 0 1130 174 0 19 chr17 28254943 28255156 -61249397 - MER3 DNA MER1_type 0 209 1 1700 152 4 4 chr17 28255177 28255440 -61249113 + AluSx SINE Alu 45 307 -5 545 279 75 15 chr17 28255904 28256105 -61248448 + MLT1L LTR MaLR 403 615 0 277 248 0 0 chr17 28256596 28256664 -61247889 - L1MD2 LINE L1 -83 6274 6092 249 220 0 0 chr17 28256670 28256720 -61247833 - L1MD2 LINE L1 -242 6117 6068 732 173 7 0 chr17 28256721 28256860 -61247693 + L1 LINE L1 4453 4592 -1554 1347 102 0 0 chr17 28256881 28257058 -61247495 - AluSg/x SINE Alu -16 294 118 18118 56 6 0 chr17 28257061 28260109 -61244444 - L1PA6 LINE L1 -6 6148 3089 1144 93 7 7 chr17 28260212 28260363 -61244190 - AluSq/x SINE Alu -162 151 1 1425 82 115 10 chr17 28260530 28260738 -61243815 - MER30 DNA MER1_type 0 230 1 1815 158 28 3 chr17 28261122 28261413 -61243140 + AluSx SINE Alu 1 298 -14 2246 96 6 13 chr17 28262579 28262891 -61241662 + AluSg SINE Alu 1 310 0 1887 152 0 4 chr17 28262975 28263252 -61241301 - AluSx SINE Alu -36 276 1 21 0 0 0 chr17 28264089 28264110 -61240443 + AT_rich Low_complexity Low_complexity 1 21 0 1890 101 0 35 chr17 28264489 28264747 -61239806 - AluSx SINE Alu -15 297 49 1830 112 35 54 chr17 28265597 28265911 -61238642 + AluSx SINE Alu 1 308 -4 1675 181 0 20 chr17 28266397 28266701 -61237852 + AluJo SINE Alu 5 302 -10 2252 103 7 0 chr17 28267664 28267955 -61236598 + AluSc SINE Alu 1 293 -16 198 143 0 0 chr17 28269573 28269608 -61234945 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 235 196 39 0 chr17 28270661 28270712 -61233841 + MER58 DNA MER1_type 2358 2410 -10 1872 136 7 14 chr17 28270713 28270999 -61233554 + AluSx SINE Alu 1 284 -28 1762 160 0 42 chr17 28271390 28271696 -61232857 - AluJb SINE Alu -5 307 15 200 86 29 0 chr17 28273072 28273107 -61231446 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 201 39 0 0 chr17 28273374 28273400 -61231153 + (CAA)n Simple_repeat Simple_repeat 2 27 0 956 74 0 8 chr17 28273402 28273524 -61231029 + AluSq/x SINE Alu 1 121 -192 2230 118 0 0 chr17 28273694 28273998 -61230555 - AluSx SINE Alu -8 304 1 251 206 15 29 chr17 28274868 28274936 -61229617 - L3 LINE CR1 -3 1574 1508 2019 119 36 16 chr17 28274953 28275256 -61229297 + AluSx SINE Alu 1 309 -3 960 171 11 45 chr17 28275263 28275439 -61229114 + AluSg/x SINE Alu 133 302 -8 310 250 0 0 chr17 28275997 28276057 -61228496 + L2 LINE L2 3209 3268 -4 717 275 142 19 chr17 28276231 28276605 -61227948 - L3 LINE CR1 -206 1371 952 1780 163 3 3 chr17 28276605 28276887 -61227666 - AluJb SINE Alu -19 293 12 1075 152 101 135 chr17 28277085 28277249 -61227304 - AluJo SINE Alu -15 287 136 2287 72 7 42 chr17 28277249 28277555 -61226998 - AluSg SINE Alu -14 296 2 1075 152 101 135 chr17 28277555 28277686 -61226867 - AluJo SINE Alu -166 136 2 2302 80 0 52 chr17 28277976 28278300 -61226253 - AluSx SINE Alu -5 307 1 1387 185 49 4 chr17 28278387 28278652 -61225901 + AluJo SINE Alu 18 294 -18 2175 113 0 10 chr17 28278657 28278966 -61225587 + AluSx SINE Alu 1 306 -6 201 138 0 0 chr17 28279869 28279898 -61224655 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2121 71 19 0 chr17 28279995 28280262 -61224291 + AluSp SINE Alu 3 274 -39 461 149 11 21 chr17 28280368 28280462 -61224091 + AluSp/q SINE Alu 216 308 -5 2269 87 13 10 chr17 28283054 28283363 -61221190 - AluSx SINE Alu -2 310 1 208 135 0 0 chr17 28283485 28283522 -61221031 + (T)n Simple_repeat Simple_repeat 1 37 0 2397 90 13 0 chr17 28283841 28284142 -61220411 - AluSx SINE Alu -7 305 1 327 179 2 0 chr17 28284540 28284607 -61219946 - Alu SINE Alu 0 300 243 356 313 138 45 chr17 28284836 28284986 -61219567 + L2 LINE L2 2113 2248 -1066 2240 124 0 0 chr17 28284986 28285284 -61219269 - AluSx SINE Alu -14 298 1 356 313 138 45 chr17 28285284 28285581 -61218972 + L2 LINE L2 2248 2602 -712 235 200 31 15 chr17 28285589 28285654 -61218899 - L1ME4a LINE L1 -80 6041 5976 498 230 196 0 chr17 28285681 28285829 -61218724 + MIR SINE MIR 86 262 0 1770 187 0 16 chr17 28285952 28286262 -61218291 + AluJb SINE Alu 1 305 -7 1847 114 70 92 chr17 28286465 28286598 -61217955 + MER46B DNA MER2_type 1 135 -2596 1224 193 60 14 chr17 28286598 28286883 -61217670 + AluSx SINE Alu 1 298 -14 1847 114 70 92 chr17 28286883 28286938 -61217615 + MER46B DNA MER2_type 135 56 -2675 2168 95 32 0 chr17 28286938 28287222 -61217331 + AluSg SINE Alu 1 293 -17 1847 114 70 92 chr17 28287222 28287401 -61217152 + MER46B DNA MER2_type 55 236 0 907 122 32 0 chr17 28287716 28287839 -61216714 + AluSq/x SINE Alu 9 135 -178 2051 138 0 7 chr17 28287839 28288137 -61216416 + AluSx SINE Alu 1 296 -16 1977 123 58 3 chr17 28288532 28288824 -61215729 + AluSg SINE Alu 2 309 -1 2200 133 0 3 chr17 28289009 28289318 -61215235 + AluSx SINE Alu 1 308 -4 1226 199 7 29 chr17 28290290 28290566 -61213987 - AluJo SINE Alu -42 270 1 435 276 8 0 chr17 28290566 28290700 -61213853 - L1M4 LINE L1 -3198 2948 2814 231 36 0 0 chr17 28290730 28290758 -61213795 + (TA)n Simple_repeat Simple_repeat 2 29 0 1943 127 3 17 chr17 28290758 28290911 -61213642 - AluSx SINE Alu -25 287 138 2347 85 0 0 chr17 28290911 28291206 -61213347 - AluSc SINE Alu -14 295 1 1943 127 3 17 chr17 28291206 28291343 -61213210 - AluSx SINE Alu -174 138 1 1951 128 0 20 chr17 28291417 28291714 -61212839 + AluSx SINE Alu 1 291 -21 183 42 0 0 chr17 28291825 28291849 -61212704 + (CCA)n Simple_repeat Simple_repeat 1 24 0 1632 178 89 7 chr17 28291852 28292156 -61212397 + MLT1A1 LTR MaLR 37 365 0 1675 176 24 3 chr17 28292185 28292475 -61212078 - AluJo SINE Alu -16 296 1 1013 156 11 34 chr17 28293706 28293885 -61210668 + AluJ SINE Alu 1 175 -137 2041 194 61 25 chr17 28293886 28294329 -61210224 - LTR2B LTR ERV1 0 490 32 782 158 8 0 chr17 28294344 28294471 -61210082 + AluJ SINE Alu 169 296 -16 316 77 0 0 chr17 28294599 28294651 -61209902 - L1MA2 LINE L1 -1 6303 6252 1968 166 0 6 chr17 28295089 28295402 -61209151 - AluJb SINE Alu -1 311 1 1034 206 55 0 chr17 28295952 28296170 -61208383 - MIR SINE MIR -4 258 29 1864 175 0 3 chr17 28296183 28296492 -61208061 + AluJb SINE Alu 1 308 -4 262 256 35 12 chr17 28296492 28296578 -61207975 + MIR SINE MIR 45 132 -130 223 175 0 0 chr17 28297244 28297284 -61207269 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 286 285 154 39 chr17 28297286 28297416 -61207137 - L2 LINE L2 0 3272 3128 476 184 127 15 chr17 28297533 28297711 -61206842 + MIR SINE MIR 43 239 -23 195 286 36 60 chr17 28298007 28298091 -61206462 - MIR SINE MIR -97 111 30 2268 116 10 0 chr17 28298929 28299230 -61205323 + AluSx SINE Alu 1 304 -8 318 222 22 0 chr17 28299251 28299341 -61205212 - MER113 DNA MER1_type? -429 92 1 853 220 30 30 chr17 28299907 28300107 -61204446 - MIR SINE MIR -55 207 8 189 194 16 113 chr17 28300133 28300195 -61204358 - L2 LINE L2 -14 3258 3203 2204 128 3 3 chr17 28300360 28300666 -61203887 + AluSx SINE Alu 1 306 -6 1773 155 3 29 chr17 28301536 28301846 -61202707 + AluJb SINE Alu 1 302 -10 2292 109 3 0 chr17 28301851 28302153 -61202400 + AluSg SINE Alu 5 307 -3 313 269 26 26 chr17 28303098 28303176 -61201377 - L1MC4 LINE L1 -1340 6702 6625 308 305 114 0 chr17 28303104 28303209 -61201344 + L1MCa LINE L1 1996 2112 -4314 * 2351 97 3 0 chr17 28303219 28303518 -61201035 - AluSp SINE Alu -13 300 1 3027 111 73 52 chr17 28303538 28303693 -61200860 - MER4B LTR ERV1 0 610 460 2420 112 0 0 chr17 28303693 28304006 -61200547 - AluSp SINE Alu 0 313 1 3027 111 73 52 chr17 28304006 28304408 -61200145 - MER4B LTR ERV1 -150 460 41 187 278 97 0 chr17 28304665 28304737 -61199816 + MIR SINE MIR 61 139 -69 1955 148 0 0 chr17 28304954 28305232 -61199321 + AluSx SINE Alu 35 312 0 392 338 56 81 chr17 28306634 28306860 -61197693 - L1M4 LINE L1 -772 5374 5165 1994 140 3 10 chr17 28306860 28307174 -61197379 - AluJo SINE Alu 0 312 1 392 338 56 81 chr17 28307174 28307414 -61197139 - L1M4 LINE L1 -981 5165 4920 1956 131 7 3 chr17 28307440 28307744 -61196809 - AluSx SINE Alu 0 305 1 26 30 0 0 chr17 28308015 28308048 -61196505 + AT_rich Low_complexity Low_complexity 1 33 0 879 158 0 0 chr17 28308048 28308175 -61196378 - FLAM_C SINE Alu -16 127 1 219 88 0 0 chr17 28308179 28308213 -61196340 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 610 13 0 0 chr17 28308215 28308292 -61196261 - L1PA3 LINE L1 0 6155 6079 475 270 56 43 chr17 28308298 28308531 -61196022 - L1ME LINE L1 -512 5609 5374 1787 139 0 96 chr17 28308697 28308953 -61195600 - AluJo SINE Alu -1 311 95 2090 136 7 3 chr17 28308953 28309255 -61195298 - AluSx SINE Alu -9 303 1 1787 139 0 96 chr17 28309255 28309342 -61195211 - AluJo SINE Alu -217 95 1 298 220 92 28 chr17 28309533 28309642 -61194911 - LTR33 LTR ERVL -52 469 354 501 277 71 34 chr17 28309682 28309920 -61194633 - LTR33 LTR ERVL -274 247 1 1806 151 11 0 chr17 28310079 28310384 -61194169 + AluJo SINE Alu 1 308 0 1763 177 37 0 chr17 28311315 28311615 -61192938 + AluSx SINE Alu 1 311 -1 663 138 11 0 chr17 28311843 28311937 -61192616 + AluSq/x SINE Alu 33 127 -186 723 148 87 46 chr17 28312047 28312243 -61192310 - LTR36 LTR ERV1 -407 204 1 521 267 47 37 chr17 28312398 28312589 -61191964 + MIR SINE MIR 66 258 -4 253 328 35 52 chr17 28312644 28312760 -61191793 + MIR SINE MIR 117 230 -32 268 297 36 103 chr17 28312836 28313031 -61191522 + MIR3 SINE MIR 13 194 -14 522 177 7 14 chr17 28313055 28313182 -61191371 + (CA)n Simple_repeat Simple_repeat 2 129 -12 3172 146 155 29 chr17 28313182 28313684 -61190869 - LTR8A LTR ERV1 0 727 124 1730 157 14 7 chr17 28313684 28314008 -61190545 + AluSx SINE Alu 1 326 0 3172 146 155 29 chr17 28314008 28314150 -61190403 - LTR8A LTR ERV1 -603 124 1 522 177 7 14 chr17 28314150 28314163 -61190390 + (CA)n Simple_repeat Simple_repeat 129 141 0 1732 151 56 0 chr17 28314850 28315135 -61189418 - AluSx SINE Alu -11 301 1 373 212 8 85 chr17 28315664 28315707 -61188846 - MIR SINE MIR -59 203 158 2498 78 3 0 chr17 28315707 28316013 -61188540 - AluSp SINE Alu -1 312 6 373 212 8 85 chr17 28316013 28316087 -61188466 - MIR SINE MIR -104 158 95 240 111 0 0 chr17 28316176 28316212 -61188341 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 468 165 220 9 chr17 28316212 28316321 -61188232 - FLAM_C SINE Alu -1 132 1 1190 183 0 25 chr17 28316967 28317169 -61187384 + AluJo SINE Alu 86 282 -30 337 231 111 9 chr17 28317733 28317841 -61186712 + LTR67 LTR ERVL 428 546 -11 1546 163 13 59 chr17 28317843 28318150 -61186403 + AluJo SINE Alu 1 293 -19 192 232 188 43 chr17 28318224 28318293 -61186260 - L2 LINE L2 -12 3260 3182 679 213 65 24 chr17 28318436 28318574 -61185979 + L2 LINE L2 2639 2787 -527 2878 169 18 84 chr17 28318574 28319201 -61185352 - LTR9 LTR ERV1 0 612 28 2136 93 66 0 chr17 28319201 28319490 -61185063 - AluSc SINE Alu -1 308 1 2878 169 18 84 chr17 28319490 28319517 -61185036 - LTR9 LTR ERV1 -584 28 1 679 213 65 24 chr17 28319517 28319547 -61185006 + L2 LINE L2 2787 2814 -500 274 215 43 21 chr17 28319550 28319643 -61184910 + MLT1J LTR MaLR 100 194 -317 1829 165 28 0 chr17 28320248 28320533 -61184020 + AluJb SINE Alu 1 293 -19 2298 87 0 14 chr17 28320642 28320978 -61183575 + AluSx SINE Alu 1 332 0 422 321 87 35 chr17 28320986 28321550 -61183003 + L1ME3A LINE L1 4614 5206 -940 578 244 63 25 chr17 28321594 28321832 -61182721 + L1ME3A LINE L1 5313 5562 -600 230 221 39 26 chr17 28321838 28321915 -61182638 + MER46C DNA MER2_type 10 87 -251 461 17 17 0 chr17 28321915 28321973 -61182580 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1866 101 67 0 chr17 28321973 28322241 -61182312 - AluSx SINE Alu -26 286 1 231 256 26 0 chr17 28322273 28322351 -61182202 + (CGG)n Simple_repeat Simple_repeat 2 81 0 619 229 32 6 chr17 28322869 28323138 -61181415 + MER52A LTR ERV1 149 597 -681 510 281 133 12 chr17 28323156 28323238 -61181315 + L1ME3A LINE L1 5565 5636 -534 1974 138 3 14 chr17 28323238 28323535 -61181018 + AluJb SINE Alu 1 294 -18 510 281 133 12 chr17 28323535 28323776 -61180777 + L1ME3A LINE L1 5636 5927 -243 1273 152 0 0 chr17 28323810 28323988 -61180565 + AluSx SINE Alu 24 201 -111 240 235 20 31 chr17 28324005 28324103 -61180450 + (TA)n Simple_repeat Simple_repeat 2 98 0 237 241 36 12 chr17 28324213 28324296 -61180257 + L1MC4 LINE L1 7918 8002 -40 225 0 0 0 chr17 28324302 28324327 -61180226 + (TTATA)n Simple_repeat Simple_repeat 4 28 0 2032 129 0 27 chr17 28324327 28324621 -61179932 - AluSx SINE Alu -26 286 1 782 196 79 8 chr17 28324621 28324840 -61179713 + MSTC LTR MaLR 168 428 0 854 123 14 14 chr17 28324840 28324986 -61179567 - L1M3 LINE L1 -593 5578 5433 969 182 30 10 chr17 28325859 28326147 -61178406 - L1M3 LINE L1 -742 5441 5155 191 313 0 83 chr17 28326147 28326243 -61178310 - L2 LINE L2 -266 3006 2919 221 234 31 47 chr17 28326387 28326451 -61178102 + MER5A DNA MER1_type 12 74 -115 770 150 0 0 chr17 28326463 28326576 -61177977 + FLAM_C SINE Alu 13 125 -18 416 289 8 8 chr17 28326586 28326707 -61177846 + MER5A DNA MER1_type 61 181 -8 252 306 0 14 chr17 28327914 28327986 -61176567 + MIR SINE MIR 191 261 -1 479 261 109 7 chr17 28327995 28328133 -61176420 + MIR SINE MIR 95 246 -16 1517 195 0 43 chr17 28328178 28328501 -61176052 - AluJb SINE Alu -3 309 1 373 200 7 89 chr17 28328518 28328653 -61175900 - L1MA8 LINE L1 0 6291 6168 357 230 14 14 chr17 28328660 28328734 -61175819 + L2 LINE L2 3180 3253 -19 579 66 0 0 chr17 28328734 28328810 -61175743 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 1252 130 0 21 chr17 28329200 28329392 -61175161 - AluSg/x SINE Alu -5 305 118 589 141 0 0 chr17 28329523 28329615 -61174938 - FLAM_C SINE Alu -24 119 28 456 308 73 13 chr17 28329615 28329849 -61174704 + L2 LINE L2 2885 3132 -181 2305 121 0 0 chr17 28329945 28330252 -61174301 - AluSg SINE Alu -3 307 1 411 289 60 118 chr17 28330499 28330848 -61173705 + L2 LINE L2 2944 3272 0 1986 162 0 3 chr17 28330849 28331158 -61173395 + AluJb SINE Alu 1 308 -4 1705 235 60 72 chr17 28331434 28331670 -61172883 - L1ME3A LINE L1 -23 6147 5910 2217 106 0 41 chr17 28331670 28331990 -61172563 - AluSx SINE Alu -5 307 1 1686 162 67 3 chr17 28331993 28332277 -61172276 - AluJo SINE Alu -10 302 1 1705 235 60 72 chr17 28332277 28332699 -61171854 - L1ME3A LINE L1 -262 5908 5493 1807 167 3 23 chr17 28332882 28333187 -61171366 - AluJo SINE Alu -9 303 5 1308 204 0 22 chr17 28333436 28333750 -61170803 + L1M4 LINE L1 4984 5290 -856 416 100 11 144 chr17 28333750 28333840 -61170713 + MADE1 DNA Mariner 2 79 -1 523 195 62 9 chr17 28333887 28334000 -61170553 + MLT1C LTR MaLR 349 467 0 282 87 0 0 chr17 28334051 28334097 -61170456 + (TG)n Simple_repeat Simple_repeat 2 47 0 1854 137 56 3 chr17 28334202 28334487 -61170066 + AluJo SINE Alu 2 301 -11 317 301 147 47 chr17 28334920 28335322 -61169231 + L2 LINE L2 2815 3256 -16 2022 144 3 0 chr17 28335340 28335645 -61168908 - AluJb SINE Alu -6 306 1 329 260 202 0 chr17 28335816 28335920 -61168633 - L2 LINE L2 0 3272 3148 742 279 75 47 chr17 28335972 28336374 -61168179 - MLT1K LTR MaLR 0 588 176 243 0 45 45 chr17 28336526 28336570 -61167983 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1259 50 0 13 chr17 28336570 28336729 -61167824 - L1PA4 LINE L1 -11 6144 5988 370 284 50 14 chr17 28336732 28336873 -61167680 - MIR3 SINE MIR -60 148 3 1940 156 16 10 chr17 28336941 28337248 -61167305 - AluSx SINE Alu -2 310 2 684 36 0 0 chr17 28337870 28337953 -61166600 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 1713 144 0 0 chr17 28337955 28338198 -61166355 - AluJb SINE Alu -28 284 42 808 184 41 10 chr17 28338237 28338433 -61166120 + MLT1C LTR MaLR 1 202 -265 1080 230 26 15 chr17 28338518 28338783 -61165770 + MLT1C LTR MaLR 200 467 0 2173 140 0 0 chr17 28338874 28339182 -61165371 - AluSx SINE Alu -4 308 1 2032 166 0 0 chr17 28339185 28339486 -61165067 - AluJb SINE Alu -11 301 1 447 323 105 4 chr17 28339603 28339832 -61164721 + L3 LINE CR1 1231 1482 -95 260 304 0 0 chr17 28339876 28339932 -61164621 - MIR SINE MIR -190 72 17 181 287 0 64 chr17 28339937 28340031 -61164522 + MIR3 SINE MIR 118 205 -3 607 227 0 0 chr17 28340288 28340398 -61164155 + MER81 DNA DNA 5 114 0 477 309 82 66 chr17 28341141 28341357 -61163196 + L2 LINE L2 2813 3024 -248 2077 127 148 13 chr17 28341357 28341734 -61162819 - MSTA LTR MaLR 0 428 1 477 309 82 66 chr17 28341734 28341970 -61162583 + L2 LINE L2 3024 3272 0 362 218 208 0 chr17 28342610 28342711 -61161842 - L1MDa LINE L1 -4089 1991 1870 1334 149 7 117 chr17 28342714 28342996 -61161557 + AluJb SINE Alu 37 287 -25 2294 104 10 0 chr17 28343148 28343447 -61161106 - AluSp SINE Alu -5 308 7 689 173 8 31 chr17 28343453 28343580 -61160973 - FLAM_C SINE Alu -8 125 2 1387 149 0 0 chr17 28343666 28343861 -61160692 - AluJb SINE Alu 0 312 118 885 254 67 40 chr17 28343863 28344268 -61160285 - L1MDa LINE L1 -4517 1744 1329 357 24 0 0 chr17 28344270 28344312 -61160241 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 1651 112 5 0 chr17 28344341 28344555 -61159998 - AluSx SINE Alu -97 215 1 1147 159 0 0 chr17 28344576 28344752 -61159801 - AluSg/x SINE Alu 0 312 137 727 154 0 60 chr17 28344827 28344976 -61159577 - FLAM_C SINE Alu -1 142 3 741 188 14 158 chr17 28344990 28345452 -61159101 - L1MDa LINE L1 -4879 1201 813 1574 120 0 0 chr17 28345452 28345660 -61158893 + AluSg/x SINE Alu 83 290 -20 741 188 14 158 chr17 28345660 28345692 -61158861 - L1MDa LINE L1 -5267 813 778 1348 211 56 83 chr17 28345707 28345764 -61158789 - L1M4 LINE L1 -978 5168 5111 1846 164 4 4 chr17 28345764 28346065 -61158488 - AluSx SINE Alu 0 301 1 1348 211 56 83 chr17 28346065 28346144 -61158409 - L1M4 LINE L1 -1035 5111 5031 2308 120 48 31 chr17 28346144 28346502 -61158051 + THE1B LTR MaLR 1 364 0 11827 89 17 3 chr17 28346502 28348060 -61156493 + THE1B-int LTR MaLR 1 1580 0 2058 124 75 29 chr17 28348060 28348408 -61156145 + THE1B LTR MaLR 1 364 0 1348 211 56 83 chr17 28348408 28348746 -61155807 - L1M4 LINE L1 -1112 5034 4703 762 249 31 0 chr17 28348759 28348984 -61155569 - L1MDa LINE L1 -2629 3451 3220 3101 176 30 66 chr17 28348985 28349346 -61155207 + MER44D DNA MER2_type 1 373 -2214 3981 115 37 94 chr17 28349346 28349398 -61155155 + LTR8 LTR ERV1 1 54 -637 2172 129 0 0 chr17 28349398 28349693 -61154860 + AluSx SINE Alu 1 295 -17 3981 115 37 94 chr17 28349693 28350131 -61154422 + LTR8 LTR ERV1 54 438 -253 1978 166 0 3 chr17 28350131 28350439 -61154114 - AluJb SINE Alu -5 307 1 3981 115 37 94 chr17 28350439 28350680 -61153873 + LTR8 LTR ERV1 438 691 0 3101 176 30 66 chr17 28350680 28351049 -61153504 + MER44D DNA MER2_type 373 705 0 1672 231 26 0 chr17 28351049 28351374 -61153179 - L1MDa LINE L1 -2860 3220 2876 1823 163 3 19 chr17 28351374 28351687 -61152866 - AluJo SINE Alu -4 308 1 1672 231 26 0 chr17 28351687 28351854 -61152699 - L1MDa LINE L1 -3204 2876 2715 1564 242 82 50 chr17 28351865 28352447 -61152106 - L1MDa LINE L1 -5441 629 29 241 299 39 0 chr17 28352471 28352548 -61152005 - MIR SINE MIR -136 126 47 741 278 99 9 chr17 28352734 28352957 -61151596 + MIR SINE MIR 8 250 -12 190 258 211 31 chr17 28353122 28353250 -61151303 - MIR3 SINE MIR -18 190 40 356 274 20 0 chr17 28353838 28353940 -61150613 - MIR SINE MIR -101 161 58 279 275 184 0 chr17 28354096 28354205 -61150348 - L2 LINE L2 0 3272 3144 1677 171 10 17 chr17 28354817 28355115 -61149438 + AluJb SINE Alu 1 296 -16 647 225 39 16 chr17 28355316 28355510 -61149043 - MIR SINE MIR -28 234 34 190 318 48 0 chr17 28356375 28356438 -61148115 - MIR SINE MIR -3 259 194 2531 83 3 0 chr17 28356485 28356797 -61147756 - AluSp SINE Alu 0 313 1 2007 161 0 13 chr17 28356797 28357108 -61147445 - AluSx SINE Alu -5 307 1 234 150 0 0 chr17 28357166 28357206 -61147347 + (CAT)n Simple_repeat Simple_repeat 2 41 0 532 289 27 7 chr17 28357222 28357371 -61147182 - MIR SINE MIR -32 230 79 244 316 11 32 chr17 28357993 28358088 -61146465 + MIR3 SINE MIR 81 173 -35 315 272 25 0 chr17 28358370 28358451 -61146102 - MLT1K LTR MaLR -8 580 498 263 313 82 8 chr17 28358575 28358709 -61145844 + MLT1J LTR MaLR 156 299 -212 512 291 46 35 chr17 28358871 28359132 -61145421 - MLT1K LTR MaLR -201 387 124 182 387 68 21 chr17 28359569 28359760 -61144793 + MIR SINE MIR 61 260 -2 233 164 213 0 chr17 28360231 28360292 -61144261 + MIR SINE MIR 16 89 -173 1793 164 11 4 chr17 28360301 28360606 -61143947 - AluJo SINE Alu 0 307 1 34 0 0 0 chr17 28360618 28360652 -61143901 + AT_rich Low_complexity Low_complexity 1 34 0 2173 127 0 32 chr17 28360665 28360980 -61143573 - AluSx SINE Alu -7 305 1 1669 168 18 55 chr17 28360998 28361117 -61143436 + L1MB8 LINE L1 5812 5934 -244 2570 75 0 0 chr17 28361117 28361425 -61143128 + AluY SINE Alu 1 308 -3 1669 168 18 55 chr17 28361425 28361686 -61142867 + L1MB8 LINE L1 5934 6178 0 311 244 87 26 chr17 28362173 28362288 -61142265 + MIR SINE MIR 24 145 -63 189 138 0 0 chr17 28362412 28362441 -61142112 - L3 LINE CR1 -127 1450 1422 203 105 53 0 chr17 28362490 28362528 -61142025 + CT-rich Low_complexity Low_complexity 1 40 0 2114 160 0 0 chr17 28362528 28362835 -61141718 - AluSx SINE Alu -5 307 1 262 344 39 0 chr17 28362842 28362970 -61141583 - L3 LINE CR1 -162 1415 1283 21 0 0 0 chr17 28364386 28364407 -61140146 + AT_rich Low_complexity Low_complexity 1 21 0 931 261 165 20 chr17 28364851 28365261 -61139292 - L2 LINE L2 -48 3265 2791 855 145 14 29 chr17 28365379 28365517 -61139036 - AluJo SINE Alu -176 136 1 934 196 23 56 chr17 28365528 28365790 -61138763 - L1ME2 LINE L1 -81 6083 5874 6738 131 38 11 chr17 28365822 28368114 -61136439 - L1MA3 LINE L1 0 7724 5367 627 115 35 26 chr17 28368108 28368221 -61136332 - L1MA3 LINE L1 -7436 129 16 * 383 236 9 19 chr17 28368220 28368326 -61136227 - L1ME2 LINE L1 -271 5895 5791 * 1433 210 39 45 chr17 28368330 28368851 -61135702 - L1ME2 LINE L1 -662 5502 4981 1659 173 35 11 chr17 28368851 28369135 -61135418 + AluJo SINE Alu 1 291 -21 1433 210 39 45 chr17 28369135 28369195 -61135358 - L1ME2 LINE L1 -1183 4981 4922 1442 167 103 55 chr17 28369596 28369944 -61134609 + MLT1A1 LTR MaLR 1 365 0 362 316 36 24 chr17 28370098 28370266 -61134287 - MIR SINE MIR -37 225 56 328 320 72 20 chr17 28370827 28370980 -61133573 + L2 LINE L2 3111 3271 -1 1987 114 60 20 chr17 28370980 28371279 -61133274 + AluSp SINE Alu 1 311 -2 562 237 25 0 chr17 28371393 28371530 -61133023 + MIR SINE MIR 115 252 -10 304 279 36 57 chr17 28371991 28372131 -61132422 - L1ME LINE L1 -386 5735 5599 276 313 45 0 chr17 28372295 28372407 -61132146 + MLT1K LTR MaLR 132 248 -340 22 0 0 0 chr17 28372418 28372440 -61132113 + AT_rich Low_complexity Low_complexity 1 22 0 763 208 61 15 chr17 28372484 28372681 -61131872 - L1MC4 LINE L1 -143 7899 7694 644 190 58 29 chr17 28372698 28372835 -61131718 - AluJo SINE Alu -66 246 106 1446 231 60 8 chr17 28372836 28373219 -61131334 - L1MC4 LINE L1 -380 7662 7300 2043 145 7 0 chr17 28373219 28373516 -61131037 - AluJb SINE Alu -13 299 1 1446 231 60 8 chr17 28373516 28373861 -61130692 - L1MC4 LINE L1 -742 7300 6751 207 0 0 0 chr17 28373868 28373891 -61130662 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 526 313 111 12 chr17 28374050 28374293 -61130260 + MLT1K LTR MaLR 322 588 0 1550 161 24 24 chr17 28374726 28374981 -61129572 + AluJo SINE Alu 1 255 -57 297 179 21 11 chr17 28375235 28375330 -61129223 + (CA)n Simple_repeat Simple_repeat 2 97 0 1854 178 0 0 chr17 28375402 28375739 -61128814 - AluJo SINE Alu 0 337 1 605 178 8 11 chr17 28375800 28376042 -61128511 + AluJ SINE Alu 1 312 0 1967 157 3 16 chr17 28376317 28376629 -61127924 - AluJb SINE Alu -4 308 1 289 238 12 25 chr17 28376898 28376978 -61127575 - MIR SINE MIR -167 95 17 1830 53 0 9 chr17 28377487 28377715 -61126838 + L1PA8 LINE L1 5947 6172 0 266 291 145 8 chr17 28377724 28377841 -61126712 + MIR SINE MIR 54 186 -76 203 286 0 20 chr17 28377952 28378001 -61126552 + L2 LINE L2 3211 3258 -14 2401 98 25 19 chr17 28378244 28378610 -61125943 - THE1C LTR MaLR 0 375 8 416 279 75 78 chr17 28378741 28378779 -61125774 - MLT1K LTR MaLR -40 548 511 2097 143 7 0 chr17 28378779 28379072 -61125481 + AluSx SINE Alu 1 295 -17 416 279 75 78 chr17 28379072 28379355 -61125198 - MLT1K LTR MaLR -77 511 228 2048 115 3 94 chr17 28379357 28379696 -61124857 - AluSx SINE Alu -4 308 1 1763 163 0 14 chr17 28379737 28380020 -61124533 + AluJo SINE Alu 14 292 -20 22 0 0 0 chr17 28380020 28380042 -61124511 + AT_rich Low_complexity Low_complexity 1 22 0 481 305 30 16 chr17 28380266 28380457 -61124096 + MIR SINE MIR 5 196 -62 382 132 26 0 chr17 28380824 28380900 -61123653 + CT-rich Low_complexity Low_complexity 4 81 0 659 311 74 55 chr17 28380920 28381422 -61123131 - L2 LINE L2 -13 3259 2754 357 261 119 8 chr17 28381930 28382064 -61122489 - L3 LINE CR1 -3 1574 1426 733 267 107 78 chr17 28382721 28383095 -61121458 - L2 LINE L2 -1 3271 2887 1236 137 0 11 chr17 28383506 28383689 -61120864 - AluSg/x SINE Alu -16 294 114 * 1342 148 51 34 chr17 28383688 28383925 -61120628 - AluSx SINE Alu -71 241 1 867 141 0 15 chr17 28383932 28384067 -61120486 - FLAM_C SINE Alu 0 133 1 773 187 80 0 chr17 28384128 28384278 -61120275 - AluJo/FRAM SINE Alu -16 296 135 750 109 0 0 chr17 28384268 28384369 -61120184 + AluSp/q SINE Alu 163 263 -50 * 1649 192 20 13 chr17 28384369 28384765 -61119788 + L1MB4 LINE L1 5681 6079 -101 22 0 0 0 chr17 28384813 28384835 -61119718 + AT_rich Low_complexity Low_complexity 1 22 0 1868 146 15 0 chr17 28385436 28385710 -61118843 + AluSx SINE Alu 1 278 -34 243 0 0 0 chr17 28385714 28385741 -61118812 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1897 131 45 0 chr17 28385745 28386036 -61118517 + AluSg SINE Alu 1 303 0 21 36 0 0 chr17 28386135 28386163 -61118390 + AT_rich Low_complexity Low_complexity 1 28 0 279 0 0 0 chr17 28386352 28386383 -61118170 + (CA)n Simple_repeat Simple_repeat 2 32 0 238 212 248 66 chr17 28386456 28386593 -61117960 - MIR SINE MIR -57 205 44 197 264 132 0 chr17 28386598 28386651 -61117902 - MIR SINE MIR -187 75 16 517 196 116 9 chr17 28387692 28387804 -61116749 - FLAM_C SINE Alu -7 126 3 268 250 77 125 chr17 28387804 28388012 -61116541 + MIR SINE MIR 59 256 -6 1166 183 39 0 chr17 28388117 28388325 -61116228 - MER20 DNA MER1_type -3 216 1 268 303 67 25 chr17 28388486 28388605 -61115948 + L2 LINE L2 3190 3313 0 1614 148 110 23 chr17 28389032 28389377 -61115176 + THE1C LTR MaLR 1 375 0 183 80 0 0 chr17 28389728 28389753 -61114800 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 1908 145 26 48 chr17 28389833 28389930 -61114623 + MER2 DNA MER2_type 1 99 -245 2294 113 3 0 chr17 28389930 28390232 -61114321 - AluSp SINE Alu -10 303 1 1908 145 26 48 chr17 28390232 28390486 -61114067 + MER2 DNA MER2_type 99 344 0 283 143 11 143 chr17 28391495 28391586 -61112967 - SN5 Other centromeric -77 378 300 884 291 43 15 chr17 28396338 28396858 -61107695 + L1MC3 LINE L1 5479 5956 -1829 246 99 37 37 chr17 28396970 28397051 -61107502 + A-rich Low_complexity Low_complexity 4 84 0 7110 41 2 0 chr17 28400349 28402006 -61102547 - L1PA5 LINE L1 0 6154 4495 568 304 105 22 chr17 28404103 28404504 -61100049 + ERVL LTR ERVL 4007 4440 -1324 351 184 112 61 chr17 28404957 28405024 -61099529 - L1MD3 LINE L1 -74 7921 7846 1630 187 0 23 chr17 28405024 28405334 -61099219 + AluJo SINE Alu 1 303 -9 351 184 112 61 chr17 28405334 28405364 -61099189 - L1MD3 LINE L1 -149 7846 7819 324 289 37 30 chr17 28405390 28405525 -61099028 - L1MC3 LINE L1 -154 7631 7496 905 196 58 0 chr17 28405525 28405714 -61098839 - Tigger3(Golem) DNA MER2_type -98 2931 2732 655 209 9 0 chr17 28405715 28405830 -61098723 + FLAM_C SINE Alu 2 117 -16 395 197 0 13 chr17 28405875 28405951 -61098602 - Tigger3(Golem) DNA MER2_type -2951 78 4 659 214 121 0 chr17 28405955 28406095 -61098458 - MER2 DNA MER2_type -188 157 1 1099 239 40 71 chr17 28406121 28406593 -61097960 - L1ME3A LINE L1 -161 6005 5537 605 238 21 0 chr17 28406639 28406782 -61097771 + MIR SINE MIR 47 192 -70 326 298 169 28 chr17 28407646 28407737 -61096816 + L1ME4a LINE L1 5878 5955 -166 2139 129 3 0 chr17 28407737 28408039 -61096514 + AluSx SINE Alu 1 303 -9 326 298 169 28 chr17 28408039 28408125 -61096428 + L1ME4a LINE L1 5955 6080 -41 704 321 64 19 chr17 28408357 28408718 -61095835 + LTR16A LTR ERVL 21 397 -53 255 288 147 31 chr17 28408741 28408932 -61095621 + L2 LINE L2 3100 3312 -1 2294 122 0 0 chr17 28409158 28409461 -61095092 + AluSg SINE Alu 1 303 -7 2309 113 3 0 chr17 28409543 28409844 -61094709 + AluSp SINE Alu 1 302 -11 1297 186 44 69 chr17 28409856 28410131 -61094422 + AluJo SINE Alu 1 268 -44 1867 183 3 0 chr17 28410200 28410506 -61094047 + AluJo SINE Alu 1 307 -5 422 288 95 41 chr17 28410605 28410931 -61093622 + L1MC/D LINE L1 5377 5727 -465 1290 153 9 52 chr17 28410934 28411163 -61093390 + AluJo SINE Alu 88 306 -6 1278 214 6 67 chr17 28411192 28411523 -61093030 + AluSx SINE Alu 1 311 -1 213 219 61 24 chr17 28412150 28412232 -61092321 + L2 LINE L2 2041 2125 -1189 1777 175 7 0 chr17 28412310 28412623 -61091930 + AluJb SINE Alu 1 315 0 561 289 77 66 chr17 28412665 28412971 -61091582 + L2 LINE L2 2131 2445 -869 1943 157 3 22 chr17 28412971 28413289 -61091264 - AluSx SINE Alu 0 312 1 561 289 77 66 chr17 28413289 28413435 -61091118 + L2 LINE L2 2445 2588 -726 643 215 15 0 chr17 28413437 28413572 -61090981 - MER89 LTR ERV1 0 559 423 1889 163 6 19 chr17 28413572 28413980 -61090573 - AluJb SINE Alu 0 404 1 2210 120 10 0 chr17 28414080 28414388 -61090165 - AluSp SINE Alu -2 311 1 2265 131 0 0 chr17 28414402 28414714 -61089839 - AluSx SINE Alu 0 312 1 382 151 0 0 chr17 28414716 28414789 -61089764 - L1M4 LINE L1 -946 5200 5128 1784 140 18 87 chr17 28414822 28414939 -61089614 + MER47A DNA MER2_type 1 124 -2199 2214 113 3 3 chr17 28414939 28415232 -61089321 + AluSp SINE Alu 3 295 -18 306 0 0 0 chr17 28415242 28415276 -61089277 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1491 117 17 35 chr17 28415276 28415507 -61089046 + AluY SINE Alu 85 311 0 1784 140 18 87 chr17 28415507 28415770 -61088783 + MER47A DNA MER2_type 131 366 0 689 281 215 7 chr17 28415789 28416194 -61088359 - L2 LINE L2 -773 2541 2053 381 248 64 64 chr17 28416195 28416352 -61088201 + MIR SINE MIR 101 257 -5 729 224 29 6 chr17 28416763 28416937 -61087616 - MER45A DNA AcHobo 0 178 1 1931 136 41 0 chr17 28417269 28417591 -61086962 - AluSq SINE Alu 0 335 2 1550 166 72 4 chr17 28417919 28418197 -61086356 - AluJb SINE Alu -15 297 1 2012 132 10 7 chr17 28418205 28418500 -61086053 - AluJb SINE Alu -14 298 3 181 291 13 25 chr17 28419133 28419212 -61085341 - L2 LINE L2 -181 3091 3014 313 331 93 0 chr17 28419297 28419448 -61085105 + L2 LINE L2 1545 1709 -1605 479 168 0 10 chr17 28419463 28419564 -61084989 + GA-rich Low_complexity Low_complexity 4 103 0 390 306 123 12 chr17 28420298 28420468 -61084085 - MIR SINE MIR -22 240 52 2158 134 3 10 chr17 28420778 28421091 -61083462 - AluJb SINE Alu -1 311 1 347 235 24 0 chr17 28421092 28421177 -61083376 - L2 LINE L2 -1515 1799 1713 626 296 141 30 chr17 28421180 28421647 -61082906 + LTR33 LTR ERVL 1 519 -2 287 48 0 24 chr17 28421653 28421695 -61082858 + (TCCC)n Simple_repeat Simple_repeat 4 44 0 1219 290 94 52 chr17 28421698 28421747 -61082806 - L2 LINE L2 -1623 1691 1646 2098 146 10 7 chr17 28421747 28422049 -61082504 + AluSx SINE Alu 1 303 -9 1219 290 94 52 chr17 28422049 28422442 -61082111 - L2 LINE L2 -1668 1646 1201 2247 118 3 3 chr17 28422442 28422755 -61081798 - AluSq SINE Alu 0 313 1 1219 290 94 52 chr17 28422755 28423069 -61081484 - L2 LINE L2 -2113 1201 902 219 260 80 73 chr17 28423091 28423241 -61081312 - L2 LINE L2 -2719 595 445 435 130 0 26 chr17 28423615 28423692 -61080861 - AluJb SINE Alu -178 134 60 247 191 44 15 chr17 28423701 28423769 -61080784 - MIR SINE MIR -109 153 84 426 219 0 0 chr17 28424454 28424536 -61080017 + L2 LINE L2 3232 3313 0 333 355 53 0 chr17 28424839 28425067 -61079486 + L2 LINE L2 2467 2706 -608 403 216 39 0 chr17 28425159 28425261 -61079292 - MER5A DNA MER1_type -80 109 4 702 306 72 16 chr17 28425265 28425768 -61078785 + L2 LINE L2 2763 3302 -11 225 277 62 0 chr17 28426148 28426213 -61078340 - MIR SINE MIR -112 150 82 * 230 213 93 27 chr17 28426183 28426258 -61078295 - MIR SINE MIR -72 136 57 * 509 309 73 32 chr17 28426251 28426497 -61078056 + L2 LINE L2 3051 3306 -7 1693 168 44 7 chr17 28426539 28426837 -61077716 + AluJo SINE Alu 1 309 -3 1811 160 0 58 chr17 28427237 28427550 -61077003 + AluJo SINE Alu 1 295 -17 803 212 0 62 chr17 28427695 28427888 -61076665 + MER5A DNA MER1_type 7 187 -2 488 208 66 0 chr17 28428686 28428792 -61075761 - MLT1H1 LTR MaLR -438 117 5 467 264 42 14 chr17 28429185 28429244 -61075309 + MIR SINE MIR 101 157 -105 2393 93 7 0 chr17 28429244 28429554 -61074999 + AluSq SINE Alu 1 312 -1 467 264 42 14 chr17 28429554 28429638 -61074915 + MIR SINE MIR 157 248 -14 608 228 57 5 chr17 28429675 28429868 -61074685 + L1M4 LINE L1 4976 5178 -968 252 254 32 16 chr17 28430295 28430358 -61074195 - MIR SINE MIR -63 145 82 373 265 109 20 chr17 28430575 28430722 -61073831 - MIR3 SINE MIR -15 193 34 23 68 0 0 chr17 28432867 28432911 -61071642 + GC_rich Low_complexity Low_complexity 1 44 0 26 64 0 0 chr17 28433147 28433194 -61071359 + GC_rich Low_complexity Low_complexity 1 47 0 189 74 0 0 chr17 28433195 28433222 -61071331 + (TCCCC)n Simple_repeat Simple_repeat 2 28 0 476 284 135 10 chr17 28433722 28433930 -61070623 + MIR SINE MIR 29 262 0 970 296 149 8 chr17 28434353 28434748 -61069805 - MLT1J LTR MaLR -45 466 16 470 183 269 91 chr17 28435901 28435970 -61068583 + MIR SINE MIR 27 82 -180 417 244 122 33 chr17 28435970 28436150 -61068403 + MER91A DNA MER1_type 1 196 0 470 183 269 91 chr17 28436150 28436277 -61068276 + MIR SINE MIR 82 258 -4 537 183 0 0 chr17 28436741 28436845 -61067708 + T-rich Low_complexity Low_complexity 3 106 0 207 0 0 0 chr17 28436845 28436868 -61067685 + (TC)n Simple_repeat Simple_repeat 1 23 0 801 189 0 0 chr17 28438005 28438127 -61066426 + AluJb SINE Alu 157 278 -34 2187 94 39 0 chr17 28438155 28438441 -61066112 - AluSx SINE Alu -15 297 1 1488 129 0 9 chr17 28438809 28439034 -61065519 - AluSg/x SINE Alu -6 304 82 329 211 102 0 chr17 28439147 28439261 -61065292 - L1ME LINE L1 -385 5736 5604 185 302 16 0 chr17 28439527 28439590 -61064963 + L2 LINE L2 2991 3054 -218 193 322 99 33 chr17 28439706 28439827 -61064726 + L2 LINE L2 3185 3313 0 1862 149 0 0 chr17 28439994 28440263 -61064290 + AluJb SINE Alu 29 297 -15 354 327 58 27 chr17 28440463 28440720 -61063833 - L1ME4a LINE L1 -12 6109 5845 211 250 241 9 chr17 28441581 28441693 -61062860 + MIR SINE MIR 88 225 -37 356 236 123 9 chr17 28441784 28441890 -61062663 + MIR SINE MIR 20 137 -71 220 273 136 0 chr17 28442739 28442827 -61061726 + MIR SINE MIR 49 148 -114 664 242 65 16 chr17 28442899 28443085 -61061468 + MIR SINE MIR 3 197 -65 512 141 0 0 chr17 28443086 28443164 -61061389 + MER2 DNA MER2_type 1 78 -267 2386 101 0 0 chr17 28443189 28443485 -61061068 - AluSc SINE Alu -13 296 1 361 217 72 0 chr17 28443485 28443568 -61060985 + MER2 DNA MER2_type 257 345 0 205 256 0 0 chr17 28443568 28443607 -61060946 + MIR SINE MIR 197 235 -27 546 211 35 21 chr17 28444272 28444414 -61060139 - MIR SINE MIR -117 145 2 242 350 80 0 chr17 28445554 28445691 -61058862 - MIR SINE MIR -62 200 53 313 338 83 15 chr17 28447048 28447181 -61057372 + MIR SINE MIR 27 168 -94 226 286 143 0 chr17 28447241 28447311 -61057242 + L2 LINE L2 3169 3248 -24 325 319 133 57 chr17 28447758 28447968 -61056585 + L2 LINE L2 3005 3238 -34 791 153 0 36 chr17 28447968 28448105 -61056448 - FLAM_C SINE Alu -1 132 1 325 319 133 57 chr17 28448105 28448142 -61056411 + L2 LINE L2 3238 3271 -1 223 327 65 9 chr17 28449043 28449150 -61055403 + MIR SINE MIR 33 145 -63 404 268 79 24 chr17 28449298 28449462 -61055091 + MIR SINE MIR 70 242 -20 382 300 23 15 chr17 28450629 28450759 -61053794 + MIR SINE MIR 119 249 -13 220 211 99 0 chr17 28451695 28451766 -61052787 - MIR SINE MIR -70 192 115 198 329 117 22 chr17 28453893 28454030 -61050523 - L2 LINE L2 0 3272 3123 346 357 42 4 chr17 28455047 28455285 -61049268 - L1ME LINE L1 -391 5771 5525 187 147 29 0 chr17 28456180 28456214 -61048339 - MIR SINE MIR -9 253 219 1602 174 41 7 chr17 28456562 28456832 -61047721 + AluJb SINE Alu 1 279 -33 826 134 87 0 chr17 28456834 28456961 -61047592 + AluJo/FRAM SINE Alu 164 301 -11 196 297 40 27 chr17 28456978 28457052 -61047501 + MIR3 SINE MIR 120 194 -14 345 279 34 50 chr17 28457054 28457233 -61047320 - MER5B DNA MER1_type 0 178 3 23 0 0 0 chr17 28457734 28457757 -61046796 + AT_rich Low_complexity Low_complexity 1 23 0 319 291 46 33 chr17 28458091 28458242 -61046311 + MIR SINE MIR 76 228 -34 219 304 36 27 chr17 28460003 28460115 -61044438 + L2 LINE L2 2885 2997 -275 207 341 49 12 chr17 28460255 28460337 -61044216 + L2 LINE L2 3188 3272 0 1289 146 160 37 chr17 28460701 28460969 -61043584 + AluSx SINE Alu 2 302 0 2361 141 35 45 chr17 28460978 28461440 -61043113 - MER4D LTR ERV1 -291 612 156 892 92 23 0 chr17 28461432 28461562 -61042991 + MER4D LTR ERV1 743 875 -28 * 268 153 0 51 chr17 28461669 28461728 -61042825 + L1ME4a LINE L1 6059 6114 -7 201 196 43 0 chr17 28461741 28461787 -61042766 + GA-rich Low_complexity Low_complexity 1 48 0 486 206 169 12 chr17 28461987 28462147 -61042406 - MIR SINE MIR 0 262 78 180 0 0 0 chr17 28462663 28462683 -61041870 + (A)n Simple_repeat Simple_repeat 1 20 0 461 198 0 0 chr17 28462845 28462926 -61041627 - MER7A DNA MER2_type 0 346 266 * 698 199 106 0 chr17 28462925 28463076 -61041477 - MER7A DNA MER2_type -181 165 1 589 282 98 52 chr17 28463198 28463524 -61041029 + MLT1J LTR MaLR 12 352 -159 2331 124 0 3 chr17 28463604 28463918 -61040635 - AluSq SINE Alu 0 313 1 912 229 26 40 chr17 28464811 28464856 -61039697 + L1ME3A LINE L1 5665 5709 -461 860 154 0 0 chr17 28464856 28464986 -61039567 - FLAM_C SINE Alu -3 130 1 912 229 26 40 chr17 28464986 28465242 -61039311 + L1ME3A LINE L1 5709 5962 -208 517 238 49 24 chr17 28465323 28465487 -61039066 + L1ME3A LINE L1 5995 6162 -8 2295 101 7 7 chr17 28465558 28465854 -61038699 - AluSx SINE Alu -16 296 1 248 262 5 108 chr17 28467644 28467759 -61036794 - MIR SINE MIR -43 165 57 344 273 30 45 chr17 28467863 28467995 -61036558 - MIR SINE MIR -48 214 85 1647 163 0 98 chr17 28468431 28468707 -61035846 - AluJo SINE Alu -6 306 67 2493 71 3 0 chr17 28468707 28469004 -61035549 + AluY SINE Alu 2 299 -12 1647 163 0 98 chr17 28469004 28469064 -61035489 - AluJo SINE Alu -245 67 3 2209 113 0 3 chr17 28469264 28469589 -61034964 + AluSx SINE Alu 1 324 0 181 328 31 0 chr17 28469686 28469750 -61034803 - MIR3 SINE MIR -53 155 90 372 350 84 9 chr17 28469767 28469993 -61034560 + MIR SINE MIR 20 262 0 1869 108 8 0 chr17 28470420 28470661 -61033892 + AluSp SINE Alu 1 243 -70 891 217 14 47 chr17 28471707 28471919 -61032634 - MIR SINE MIR -27 235 31 199 240 0 20 chr17 28472487 28472537 -61032016 - MIR SINE MIR -112 150 102 1103 275 52 8 chr17 28473471 28473856 -61030697 - MLT1I LTR MaLR -3 406 5 530 108 0 0 chr17 28473938 28474012 -61030541 - AluS SINE Alu -229 84 11 1148 163 23 32 chr17 28474022 28474243 -61030310 - MER20 DNA MER1_type 0 219 1 431 270 26 9 chr17 28474343 28474458 -61030095 + MIR SINE MIR 121 237 -25 236 356 30 45 chr17 28475026 28475158 -61029395 - L3 LINE CR1 -9 1568 1439 291 294 20 10 chr17 28475217 28475319 -61029234 + MIR SINE MIR 10 112 -150 1436 92 0 0 chr17 28475640 28475814 -61028739 + AluSx SINE Alu 1 174 -138 1263 176 0 30 chr17 28475815 28476048 -61028505 - THE1-int LTR MaLR -833 747 522 422 78 324 10 chr17 28476049 28476151 -61028402 + AluSc SINE Alu 176 309 0 183 80 0 0 chr17 28476160 28476185 -61028368 + (A)n Simple_repeat Simple_repeat 1 25 0 215 300 0 0 chr17 28476260 28476320 -61028233 + MIR SINE MIR 159 218 -44 208 238 0 0 chr17 28476414 28476456 -61028097 + L2 LINE L2 3255 3296 -17 207 366 171 5 chr17 28476864 28477080 -61027473 - L3 LINE CR1 -476 1101 850 289 361 8 23 chr17 28477889 28478019 -61026534 - L3 LINE CR1 -1284 293 166 527 215 58 35 chr17 28478604 28478776 -61025777 + MER5B DNA MER1_type 1 176 -2 181 243 114 29 chr17 28478859 28478929 -61025624 + MER5A DNA MER1_type 114 189 0 2354 87 0 26 chr17 28479081 28479391 -61025162 - AluSx SINE Alu -10 302 1 702 276 158 11 chr17 28479694 28480049 -61024504 + MER113 DNA MER1_type? 60 466 -55 212 222 74 0 chr17 28481832 28481886 -61022667 - L3 LINE CR1 -7 1570 1513 536 249 75 55 chr17 28484152 28484353 -61020200 + MIR SINE MIR 56 260 -2 264 236 195 0 chr17 28484524 28484647 -61019906 - MIR SINE MIR -4 258 112 353 343 6 41 chr17 28484818 28484987 -61019566 - MIR3 SINE MIR -11 197 35 1545 173 3 71 chr17 28485949 28486086 -61018467 + AluJo SINE Alu 1 146 -166 432 0 0 0 chr17 28486086 28486134 -61018419 + (CA)n Simple_repeat Simple_repeat 2 49 0 1545 173 3 71 chr17 28486134 28486320 -61018233 + AluJo SINE Alu 146 302 -10 198 143 0 0 chr17 28486331 28486366 -61018187 + (TG)n Simple_repeat Simple_repeat 2 36 0 343 286 131 40 chr17 28486522 28486697 -61017856 - L1MC/D LINE L1 -2030 5778 5588 242 283 120 36 chr17 28487089 28487285 -61017268 - MIR SINE MIR -1 261 20 207 176 0 0 chr17 28487322 28487356 -61017197 + (CA)n Simple_repeat Simple_repeat 1 34 0 208 326 0 22 chr17 28487814 28487906 -61016647 + GA-rich Low_complexity Low_complexity 2 91 0 2464 73 0 0 chr17 28488380 28488667 -61015886 - AluSc SINE Alu -22 287 1 656 164 49 8 chr17 28488673 28488795 -61015758 - FLAM_C SINE Alu -16 127 1 431 185 7 89 chr17 28488851 28488986 -61015567 + L1ME3A LINE L1 5697 5820 -1988 345 273 151 7 chr17 28489067 28489206 -61015347 + L1ME3A LINE L1 6010 6168 -2 1671 194 24 21 chr17 28489314 28489650 -61014903 + MSTB LTR MaLR 1 337 -89 298 165 25 51 chr17 28489613 28489692 -61014861 + AluS SINE Alu 223 299 -2 * 320 24 71 0 chr17 28489706 28489748 -61014805 + MSTB1 LTR MaLR 323 367 -65 969 110 0 22 chr17 28489748 28489884 -61014669 - FLAM_C SINE Alu -10 133 1 2321 96 0 3 chr17 28489896 28490198 -61014355 - AluSx SINE Alu -11 301 1 393 167 0 0 chr17 28490198 28490270 -61014283 + MSTB1 LTR MaLR 361 432 0 383 312 7 28 chr17 28490413 28490554 -61013999 - MIR3 SINE MIR -56 152 15 400 317 107 53 chr17 28491372 28491615 -61012938 - MIR SINE MIR -3 259 4 279 230 140 17 chr17 28492243 28492377 -61012176 + MIR SINE MIR 3 150 -58 257 351 0 0 chr17 28492749 28492823 -61011730 + L2 LINE L2 3238 3311 -2 1984 134 38 3 chr17 28492829 28493119 -61011434 + AluSx SINE Alu 1 300 -12 328 248 41 21 chr17 28493487 28493632 -61010921 - LTR16A LTR ERVL -287 163 16 2442 80 17 0 chr17 28493744 28494045 -61010508 - AluSp SINE Alu -7 306 1 410 285 118 106 chr17 28494459 28494873 -61009680 - L1ME4a LINE L1 -65 6056 5638 23 33 0 0 chr17 28495071 28495101 -61009452 + AT_rich Low_complexity Low_complexity 1 30 0 714 142 0 0 chr17 28495101 28495207 -61009346 - FLAM_C SINE Alu -36 107 2 1129 102 6 11 chr17 28495493 28495669 -61008884 + L1PB3 LINE L1 5965 6139 -15 276 290 109 65 chr17 28495950 28496088 -61008465 - MIR3 SINE MIR -13 195 52 320 204 114 125 chr17 28496598 28496666 -61007887 - L2 LINE L2 -1 3312 3245 1855 135 51 4 chr17 28496666 28496940 -61007613 + AluSx SINE Alu 1 287 -25 222 37 0 0 chr17 28496943 28496970 -61007583 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 320 204 114 125 chr17 28496970 28497073 -61007480 - L2 LINE L2 -70 3243 3139 252 235 86 12 chr17 28497243 28497324 -61007229 - L2 LINE L2 -531 2783 2697 246 182 0 99 chr17 28498087 28498208 -61006345 + GA-rich Low_complexity Low_complexity 2 110 0 407 188 0 104 chr17 28498232 28498424 -61006129 + GA-rich Low_complexity Low_complexity 3 174 0 276 202 225 0 chr17 28498498 28498587 -61005966 - MIR SINE MIR -63 145 37 210 250 120 43 chr17 28498780 28498872 -61005681 - MIR SINE MIR 0 262 164 434 272 22 72 chr17 28498905 28499085 -61005468 - MIR SINE MIR -76 186 16 262 274 36 12 chr17 28499184 28499268 -61005285 - L2 LINE L2 -18 3254 3169 2013 152 0 16 chr17 28499333 28499642 -61004911 + AluJo SINE Alu 1 304 -8 299 254 130 22 chr17 28499809 28499947 -61004606 + MIR3 SINE MIR 2 154 -54 4007 95 2 0 chr17 28499980 28500529 -61004024 + MER41A LTR ERV1 1 550 -4 264 280 64 32 chr17 28501171 28501296 -61003257 + L2 LINE L2 3143 3271 -1 318 316 81 14 chr17 28502222 28502431 -61002122 + L2 LINE L2 2953 3175 -138 593 157 20 10 chr17 28502435 28502537 -61002016 - FLAM_A SINE Alu -21 121 19 463 310 0 32 chr17 28502538 28502696 -61001857 + L2 LINE L2 3161 3313 0 23 0 0 0 chr17 28502698 28502721 -61001832 + AT_rich Low_complexity Low_complexity 1 23 0 588 266 111 10 chr17 28502721 28502928 -61001625 - MIR SINE MIR -25 237 10 687 169 81 27 chr17 28504279 28504427 -61000126 + AluJb SINE Alu 133 288 -24 2285 101 20 0 chr17 28504527 28504824 -60999729 - AluSx SINE Alu -9 303 1 898 240 141 42 chr17 28505739 28506173 -60998380 + L2 LINE L2 2818 3294 -19 1963 129 20 10 chr17 28506186 28506480 -60998073 + AluSx SINE Alu 1 297 -15 2084 137 0 36 chr17 28506675 28506811 -60997742 + AluSx SINE Alu 1 140 -172 2529 84 0 0 chr17 28506811 28507121 -60997432 + AluSg SINE Alu 1 310 0 2084 137 0 36 chr17 28507121 28507290 -60997263 + AluSx SINE Alu 140 295 -17 491 271 43 56 chr17 28507292 28507315 -60997238 + L1ME4a LINE L1 5567 5589 -532 378 0 0 0 chr17 28507315 28507357 -60997196 + (CA)n Simple_repeat Simple_repeat 2 43 0 491 271 43 56 chr17 28507357 28507641 -60996912 + L1ME4a LINE L1 5589 5881 -240 561 296 74 0 chr17 28507663 28507866 -60996687 - MIR SINE MIR -17 245 28 2058 140 24 0 chr17 28508822 28509115 -60995438 + AluSx SINE Alu 1 300 -12 291 261 17 52 chr17 28509115 28509230 -60995323 + L1MC5 LINE L1 7821 7931 -30 2402 70 0 22 chr17 28509234 28509548 -60995005 + AluY SINE Alu 1 307 -4 230 313 21 21 chr17 28509569 28509665 -60994888 + MER34 LTR ERV1 1 96 -446 764 180 0 30 chr17 28509670 28509837 -60994716 + LTR29 LTR ERV1 137 298 -324 528 253 60 24 chr17 28509838 28510004 -60994549 + LTR48B LTR ERV1 473 644 0 873 206 41 32 chr17 28510166 28510385 -60994168 + MIR SINE MIR 41 261 -1 213 39 0 0 chr17 28510881 28510907 -60993646 + (CAGG)n Simple_repeat Simple_repeat 1 26 0 26 0 0 0 chr17 28511809 28511835 -60992718 + AT_rich Low_complexity Low_complexity 1 26 0 705 157 0 0 chr17 28511837 28511952 -60992601 - FLAM_C SINE Alu -18 115 1 1275 102 0 31 chr17 28512315 28512511 -60992042 - MER30B DNA MER1_type 0 190 1 663 185 96 0 chr17 28512618 28512764 -60991789 - AluJb SINE Alu -3 309 150 385 275 9 18 chr17 28513353 28513462 -60991091 + MIR3 SINE MIR 95 202 -6 1538 128 163 4 chr17 28513852 28514110 -60990443 - AluJb SINE Alu -13 299 1 560 273 195 5 chr17 28514247 28514628 -60989925 + L1ME4a LINE L1 5599 6102 -19 298 335 204 11 chr17 28515029 28515220 -60989333 + MIR SINE MIR 17 244 -18 2110 141 3 0 chr17 28515966 28516265 -60988288 + AluSx SINE Alu 11 310 -2 814 92 8 25 chr17 28518170 28518290 -60986263 + FLAM_C SINE Alu 26 143 0 225 171 0 0 chr17 28518555 28518590 -60985963 - Alu SINE Alu -235 68 34 1882 151 14 0 chr17 28518590 28518875 -60985678 + AluSx SINE Alu 13 301 -11 1179 165 0 100 chr17 28518887 28519148 -60985405 - MER46A DNA MER2_type 0 236 2 362 192 0 26 chr17 28519892 28519970 -60984583 - MIR SINE MIR -151 111 36 1448 160 0 0 chr17 28520075 28520287 -60984266 - AluJb SINE Alu -17 295 84 594 326 19 30 chr17 28520992 28521256 -60983297 - MIR SINE MIR -1 261 1 201 225 0 0 chr17 28521288 28521328 -60983225 + (CAGC)n Simple_repeat Simple_repeat 1 40 0 377 235 29 67 chr17 28521605 28521725 -60982828 + MER33 DNA MER1_type 1 86 -97 367 315 172 19 chr17 28521759 28522348 -60982205 + L2 LINE L2 2512 3251 -62 289 316 71 6 chr17 28522928 28523096 -60981457 - MIR SINE MIR -71 191 13 211 279 0 16 chr17 28523133 28523194 -60981359 + MIR SINE MIR 90 149 -113 858 101 78 0 chr17 28524216 28524345 -60980208 + MER85 DNA T2_type 1 139 0 3156 108 75 4 chr17 28524359 28524851 -60979702 + MER1A DNA MER1_type 1 527 0 1508 188 20 32 chr17 28524870 28525215 -60979338 - L1MD3 LINE L1 0 7995 7655 1466 183 30 55 chr17 28525258 28525541 -60979012 - L1MC3 LINE L1 -643 7142 6870 216 0 0 0 chr17 28525541 28525565 -60978988 + (TG)n Simple_repeat Simple_repeat 2 25 0 1466 183 30 55 chr17 28525565 28525679 -60978874 - L1MC3 LINE L1 -915 6870 6755 603 166 93 14 chr17 28525719 28525858 -60978695 - L1MB3 LINE L1 -1 6182 6033 1947 138 6 29 chr17 28526237 28526549 -60978004 - AluJo SINE Alu -7 305 1 408 264 57 0 chr17 28527599 28527705 -60976848 + MIR3 SINE MIR 67 178 -30 190 279 33 16 chr17 28528580 28528641 -60975912 + L2 LINE L2 3211 3272 0 552 263 46 0 chr17 28529429 28529604 -60974949 + MER3 DNA MER1_type 25 207 -2 194 242 0 48 chr17 28529764 28529826 -60974727 - L2 LINE L2 -329 2984 2926 256 319 0 0 chr17 28531622 28531691 -60972862 - L2 LINE L2 0 3313 3245 209 33 33 0 chr17 28531863 28531893 -60972660 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 2088 122 0 0 chr17 28531895 28532173 -60972380 - AluSx SINE Alu -34 278 1 327 216 216 0 chr17 28532233 28532335 -60972218 + L2 LINE L2 3190 3313 0 271 250 0 0 chr17 28532909 28532973 -60971580 + MIR SINE MIR 57 120 -142 437 361 89 7 chr17 28532985 28533265 -60971288 + L2 LINE L2 2432 2734 -580 186 21 64 85 chr17 28533272 28533319 -60971234 + (TTTCC)n Simple_repeat Simple_repeat 5 50 0 1417 178 35 8 chr17 28533326 28533584 -60970969 - AluJo SINE Alu -47 265 1 388 311 143 32 chr17 28533596 28533990 -60970563 + L2 LINE L2 2732 3179 -134 2404 100 3 6 chr17 28534010 28534321 -60970232 - AluSq SINE Alu -3 310 1 343 277 12 0 chr17 28534682 28534765 -60969788 - MLT1K LTR MaLR -324 264 181 331 226 36 109 chr17 28535112 28535249 -60969304 - L1ME4a LINE L1 -23 6098 5972 288 295 23 39 chr17 28535317 28535446 -60969107 - MIR SINE MIR -14 248 122 1728 186 7 7 chr17 28535459 28535754 -60968799 - AluJo SINE Alu -17 295 1 368 241 168 7 chr17 28535787 28535924 -60968629 - L1ME4a LINE L1 -7 6114 5956 301 314 16 33 chr17 28536992 28537113 -60967440 + MIR SINE MIR 11 129 -133 672 145 8 40 chr17 28537343 28537467 -60967086 + FLAM_C SINE Alu 5 124 -19 213 196 59 0 chr17 28537889 28537940 -60966613 + MIR3 SINE MIR 124 177 -31 1424 227 34 3 chr17 28539537 28539858 -60964695 + MER58B DNA MER1_type 3 333 -8 270 295 266 0 chr17 28540335 28540474 -60964079 + MIR SINE MIR 81 256 -6 422 278 9 35 chr17 28540870 28540985 -60963568 - MER5B DNA MER1_type -66 112 1 314 260 0 0 chr17 28540991 28541064 -60963489 - MIR3 SINE MIR -49 159 87 243 308 177 0 chr17 28543174 28543304 -60961249 + Charlie8 DNA MER1_type 19 171 -2246 1196 134 106 0 chr17 28543420 28543637 -60960916 + MER57A LTR ERV1 1 240 -163 205 355 9 45 chr17 28544934 28545044 -60959509 + L2 LINE L2 3080 3185 -87 3832 148 10 2 chr17 28545079 28545711 -60958842 - MER41B LTR ERV1 0 624 1 1521 237 144 5 chr17 28545826 28546248 -60958305 - MLT1E2 LTR MaLR -8 618 138 1683 129 25 53 chr17 28546266 28546584 -60957969 - Tigger7 DNA MER2_type -1 2486 2178 1375 173 4 43 chr17 28546587 28546841 -60957712 - Tigger7 DNA MER2_type -458 275 32 274 186 34 0 chr17 28546949 28547008 -60957545 + MIR SINE MIR 85 145 -117 310 227 89 0 chr17 28548538 28548656 -60955897 - MIR SINE MIR -61 147 40 189 344 44 0 chr17 28548957 28549047 -60955506 - MIR SINE MIR -149 113 20 835 229 36 0 chr17 28549350 28549542 -60955011 + MIR SINE MIR 44 242 -20 2001 160 3 6 chr17 28549626 28549939 -60954614 + AluSx SINE Alu 1 312 0 272 292 10 20 chr17 28550614 28550729 -60953824 + MIR SINE MIR 44 155 -60 257 153 17 68 chr17 28550773 28550832 -60953721 - MSTA LTR MaLR 0 428 373 1448 112 0 0 chr17 28550848 28551045 -60953508 - AluSg SINE Alu -58 252 56 1653 135 102 27 chr17 28551047 28551380 -60953173 - MSTA LTR MaLR -41 387 30 315 288 103 84 chr17 28551380 28551843 -60952710 + L2 LINE L2 2778 3247 -25 194 310 42 0 chr17 28552179 28552236 -60952317 + MIR SINE MIR 89 151 -111 1353 188 31 0 chr17 28552236 28552465 -60952088 - MER46A DNA MER2_type 0 236 1 194 310 42 0 chr17 28552465 28552478 -60952075 + MIR SINE MIR 151 162 -100 612 271 134 20 chr17 28553368 28553615 -60950938 - MLT1I LTR MaLR -1 408 134 291 56 0 0 chr17 28554234 28554270 -60950283 - U2 snRNA snRNA -152 36 1 2091 124 3 0 chr17 28554974 28555272 -60949281 - AluSx SINE Alu -13 299 1 340 313 102 6 chr17 28555297 28555463 -60949090 + MIR SINE MIR 45 226 -36 2200 118 0 0 chr17 28556905 28557209 -60947344 - AluSx SINE Alu -8 304 1 307 287 11 11 chr17 28558914 28559001 -60945552 - MER5A DNA MER1_type -5 184 98 261 264 22 33 chr17 28559284 28559375 -60945178 - MIR SINE MIR -165 97 8 327 329 42 36 chr17 28559432 28559599 -60944954 + MIR SINE MIR 30 197 -65 1085 267 59 30 chr17 28560035 28560603 -60943950 - L1MC4a LINE L1 0 6162 5574 325 355 35 12 chr17 28561055 28561224 -60943329 - L2 LINE L2 -213 3059 2887 264 224 34 56 chr17 28561469 28561576 -60942977 + MIR SINE MIR 43 147 -81 248 285 179 8 chr17 28562881 28563004 -60941549 - MIR SINE MIR -6 256 113 1660 229 40 6 chr17 28563771 28564124 -60940429 - MLT1A1 LTR MaLR 0 365 1 387 285 66 0 chr17 28564134 28564271 -60940282 + MIR SINE MIR 47 192 -70 189 313 157 0 chr17 28564912 28564995 -60939558 - MIR SINE MIR -86 176 81 261 188 0 31 chr17 28565147 28565211 -60939342 - MER103 DNA DNA -97 69 8 511 336 67 5 chr17 28565387 28565610 -60938943 - MIR SINE MIR -6 256 20 678 277 173 9 chr17 28566028 28566346 -60938207 + MER113 DNA MER1_type? 1 370 -151 229 329 13 13 chr17 28566734 28566810 -60937743 + L2 LINE L2 3167 3242 -30 200 326 161 22 chr17 28566846 28567119 -60937434 - L2 LINE L2 -21 3292 2982 397 282 92 8 chr17 28567615 28567746 -60936807 - MIR SINE MIR -83 179 38 191 333 15 0 chr17 28567963 28568029 -60936524 - MIR SINE MIR -90 172 106 5898 158 76 38 chr17 28569027 28569312 -60935241 - Tigger3b DNA MER2_type -1798 1230 957 2073 119 3 0 chr17 28569312 28569597 -60934956 + AluSx SINE Alu 1 286 -26 5898 158 76 38 chr17 28569597 28570189 -60934364 - Tigger3b DNA MER2_type -2071 957 294 2193 108 0 19 chr17 28570189 28570504 -60934049 + AluSx SINE Alu 1 309 -3 5898 158 76 38 chr17 28570504 28570810 -60933743 - Tigger3b DNA MER2_type -2734 294 1 333 246 99 24 chr17 28570810 28570949 -60933604 - MIR SINE MIR -48 160 9 261 313 232 0 chr17 28571642 28571754 -60932799 - MIR3 SINE MIR -26 182 45 289 216 0 0 chr17 28573178 28573229 -60931324 + MER81 DNA DNA 39 89 -25 386 309 81 36 chr17 28574218 28574441 -60930112 - MIR SINE MIR -20 242 10 195 207 155 0 chr17 28574947 28575005 -60929548 + MER5B DNA MER1_type 112 178 0 349 270 111 0 chr17 28575239 28575365 -60929188 - MIR3 SINE MIR -30 178 39 1734 118 26 22 chr17 28576040 28576311 -60928242 + AluJo SINE Alu 6 277 -35 683 246 12 36 chr17 28576605 28576772 -60927781 + MER63 DNA MER1_type 1 789 -47 2002 121 0 0 chr17 28576888 28577169 -60927384 - AluSx SINE Alu -31 281 1 473 218 78 14 chr17 28578309 28578451 -60926102 + MIR SINE MIR 52 202 -60 426 340 13 19 chr17 28578581 28578740 -60925813 - MIR3 SINE MIR -39 169 12 612 252 64 41 chr17 28578969 28579187 -60925366 + MIR SINE MIR 7 229 -33 275 390 68 10 chr17 28580323 28580528 -60924025 + MIR SINE MIR 12 228 -34 1323 152 55 82 chr17 28580639 28580967 -60923586 - MER33 DNA MER1_type -2 322 4 217 283 329 0 chr17 28581128 28581280 -60923273 - MIR SINE MIR -14 248 47 2204 161 76 24 chr17 28582206 28582627 -60921926 - MER65A LTR ERV1 0 445 3 2760 114 58 5 chr17 28583329 28583741 -60920812 - MER61C LTR ERV1 0 434 1 1922 132 14 10 chr17 28583845 28584140 -60920413 - AluSx SINE Alu -15 297 2 350 283 75 68 chr17 28584146 28584411 -60920142 - L1ME4a LINE L1 -188 5933 5667 464 268 6 93 chr17 28584571 28584754 -60919799 - MER5B DNA MER1_type -8 170 4 1210 297 80 43 chr17 28585693 28586511 -60918042 - HAL1 LINE L1 -655 1852 1005 2117 118 0 13 chr17 28587562 28587867 -60916686 - AluSq SINE Alu -12 301 1 203 228 79 89 chr17 28588402 28588503 -60916050 + MIR3 SINE MIR 61 160 -48 236 214 71 0 chr17 28588506 28588576 -60915977 - MER58C DNA MER1_type -3 212 138 476 242 27 40 chr17 28588602 28588751 -60915802 - MER58C DNA MER1_type -55 160 140 352 289 0 0 chr17 28588812 28588903 -60915650 + MER58C DNA MER1_type 18 85 -130 913 121 23 0 chr17 28588903 28589035 -60915518 - AluJo SINE Alu -177 135 1 376 241 147 0 chr17 28589275 28589391 -60915162 - MER58C DNA MER1_type -14 201 69 2296 99 3 0 chr17 28589433 28589736 -60914817 - AluSx SINE Alu -8 304 1 1954 113 48 3 chr17 28589744 28590037 -60914516 - AluSg SINE Alu -4 306 1 293 256 11 22 chr17 28590460 28590550 -60914003 + L2 LINE L2 3184 3272 0 251 273 26 0 chr17 28590861 28590938 -60913615 - MIR3 SINE MIR -37 171 93 352 298 8 48 chr17 28592836 28592960 -60911593 + MER5A DNA MER1_type 63 181 -8 244 409 35 0 chr17 28595413 28595528 -60909025 - L2 LINE L2 -9 3263 3145 367 159 72 0 chr17 28596221 28596290 -60908263 + AluSp/q SINE Alu 219 292 -11 23 33 0 0 chr17 28596343 28596373 -60908180 + AT_rich Low_complexity Low_complexity 1 30 0 327 187 30 15 chr17 28597010 28597144 -60907409 + CT-rich Low_complexity Low_complexity 2 137 0 490 286 88 12 chr17 28598383 28598554 -60905999 - MIR SINE MIR -50 212 29 219 222 0 0 chr17 28598581 28598626 -60905927 - L2 LINE L2 -14 3258 3214 378 290 56 0 chr17 28598629 28598736 -60905817 + L1 LINE L1 2703 2815 -3331 1251 139 14 42 chr17 28598736 28598952 -60905601 + MER1B DNA MER1_type 130 339 0 663 323 16 0 chr17 28599411 28599603 -60904950 - MIR SINE MIR -28 234 40 1377 162 128 42 chr17 28599616 28599951 -60904602 - L1M3 LINE L1 -388 5795 5426 1111 279 159 7 chr17 28600369 28600415 -60904138 - L1ME3 LINE L1 -3 6159 6121 1837 148 7 13 chr17 28600415 28600719 -60903834 - AluJo SINE Alu -10 302 1 1111 279 159 7 chr17 28600719 28601170 -60903383 - L1ME3 LINE L1 -41 6121 5563 1778 169 0 25 chr17 28601170 28601490 -60903063 - AluJb SINE Alu 0 312 1 1111 279 159 7 chr17 28601490 28601558 -60902995 - L1ME3 LINE L1 -599 5563 5507 333 228 76 0 chr17 28602303 28602382 -60902171 + MIR3 SINE MIR 70 154 -54 216 0 0 0 chr17 28603097 28603121 -60901432 + (TCCTG)n Simple_repeat Simple_repeat 5 28 0 534 286 164 9 chr17 28603205 28603425 -60901128 + MIR SINE MIR 9 262 0 229 267 114 19 chr17 28603590 28603695 -60900858 - MIR SINE MIR -89 173 59 574 204 24 15 chr17 28604678 28604809 -60899744 + MIR SINE MIR 9 152 -56 262 129 77 0 chr17 28604895 28604955 -60899598 - MLT1D LTR MaLR -49 456 356 411 250 73 22 chr17 28605369 28605505 -60899048 - MIR SINE MIR -72 190 48 1517 177 83 83 chr17 28605636 28605823 -60898730 - MLT1D LTR MaLR -49 456 270 1839 169 0 10 chr17 28605823 28606136 -60898417 + AluJb SINE Alu 1 310 -2 1517 177 83 83 chr17 28606136 28606384 -60898169 - MLT1D LTR MaLR -234 271 21 300 318 19 9 chr17 28606393 28606500 -60898053 - L1MC4a LINE L1 -1786 6022 5915 425 214 11 112 chr17 28606501 28606688 -60897865 - L1MC4a LINE L1 -1954 5854 5687 1276 193 58 29 chr17 28606725 28607046 -60897507 + AluJo SINE Alu 1 329 0 247 345 24 0 chr17 28607503 28607587 -60896966 - MIR SINE MIR -130 132 47 463 237 74 33 chr17 28607818 28608033 -60896520 - L1MC5 LINE L1 -37 7924 7701 1796 173 0 10 chr17 28608040 28608329 -60896224 - AluJb SINE Alu -26 286 1 605 252 47 68 chr17 28608369 28608603 -60895950 + MER102b DNA MER1_type 106 334 -7 604 285 77 14 chr17 28608801 28609008 -60895545 - MIR SINE MIR -11 251 32 229 328 46 8 chr17 28609596 28609727 -60894826 + L2 LINE L2 3132 3267 -46 210 150 0 0 chr17 28610880 28610920 -60893633 + (CCCCCT)n Simple_repeat Simple_repeat 2 41 0 1453 153 12 20 chr17 28611134 28611293 -60893260 - AluJo SINE Alu -18 294 136 2083 114 0 3 chr17 28611293 28611592 -60892961 - AluSc SINE Alu -11 298 1 1453 153 12 20 chr17 28611592 28611686 -60892867 - AluJo SINE Alu -176 136 43 465 295 46 31 chr17 28611700 28611961 -60892592 - Tigger8 DNA MER2_type -186 480 216 2420 96 60 8 chr17 28612882 28613246 -60891307 + L1PA11 LINE L1 5782 6164 -10 1465 95 0 0 chr17 28613264 28613454 -60891099 + AluSq SINE Alu 17 206 -107 330 107 0 0 chr17 28613454 28613510 -60891043 + AluSq SINE Alu 242 297 -4 21 0 0 0 chr17 28613520 28613541 -60891012 + AT_rich Low_complexity Low_complexity 1 21 0 602 264 51 17 chr17 28614198 28614376 -60890177 + MIR SINE MIR 20 203 -59 320 228 51 146 chr17 28614376 28614478 -60890075 + Charlie8 DNA MER1_type 1 111 -219 668 238 0 0 chr17 28614478 28614600 -60889953 + FLAM_A SINE Alu 1 122 -11 320 228 51 146 chr17 28614600 28614751 -60889802 + Charlie8 DNA MER1_type 111 230 -100 361 292 87 104 chr17 28615680 28616046 -60888507 + L2 LINE L2 2906 3265 -7 246 315 24 15 chr17 28616331 28616449 -60888104 + MIR SINE MIR 15 132 -76 279 294 138 0 chr17 28619156 28619265 -60885288 - MIR SINE MIR -95 167 44 481 344 35 22 chr17 28619282 28619509 -60885044 - L2 LINE L2 -1 3312 3083 431 317 90 24 chr17 28619562 28619729 -60884824 + MER5B DNA MER1_type 1 178 0 298 278 72 0 chr17 28619729 28619826 -60884727 - L2 LINE L2 -504 2810 2707 697 278 28 0 chr17 28619830 28620006 -60884547 + MIR SINE MIR 79 259 -3 202 236 180 34 chr17 28620020 28620109 -60884444 - L2 LINE L2 -608 2706 2605 243 61 0 0 chr17 28620298 28620331 -60884222 + (GGGA)n Simple_repeat Simple_repeat 2 34 0 353 266 59 53 chr17 28621704 28621873 -60882680 + MER5A DNA MER1_type 14 183 -6 2046 127 0 34 chr17 28621876 28622200 -60882353 + AluSq SINE Alu 1 313 0 496 276 6 26 chr17 28623855 28624011 -60880542 - MER103 DNA DNA -12 154 2 752 250 211 28 chr17 28624069 28624429 -60880124 + L2 LINE L2 2888 3313 0 260 257 40 0 chr17 28625483 28625557 -60878996 - L2 LINE L2 -60 3212 3136 211 259 94 0 chr17 28626011 28626096 -60878457 + MIR SINE MIR 58 150 -58 526 276 52 6 chr17 28626476 28626650 -60877903 - MIR SINE MIR -70 192 11 344 331 65 7 chr17 28627648 28627802 -60876751 - MIR3 SINE MIR -26 182 20 342 307 98 49 chr17 28628350 28628594 -60875959 + L2 LINE L2 3052 3307 -6 312 318 290 0 chr17 28628738 28628914 -60875639 + MIR SINE MIR 6 232 -30 180 111 0 0 chr17 28629353 28629380 -60875173 + (CTCA)n Simple_repeat Simple_repeat 1 27 0 303 241 72 0 chr17 28629390 28629473 -60875080 - L2 LINE L2 -35 3237 3149 437 294 160 16 chr17 28629546 28629740 -60874813 + MIR SINE MIR 15 236 -26 423 321 101 41 chr17 28630872 28631066 -60873487 + MIR SINE MIR 2 212 -50 2080 111 10 0 chr17 28631066 28631354 -60873199 + AluSg SINE Alu 1 291 -19 423 321 101 41 chr17 28631354 28631377 -60873176 + MIR SINE MIR 212 232 -30 1957 124 17 17 chr17 28631483 28631782 -60872771 - AluSx SINE Alu -13 299 1 2264 102 0 0 chr17 28632252 28632557 -60871996 + AluSx SINE Alu 1 305 -7 277 374 144 0 chr17 28633903 28634042 -60870511 + MIR SINE MIR 95 253 -9 1679 189 3 7 chr17 28634607 28634914 -60869639 - AluJo SINE Alu -6 306 1 799 236 116 70 chr17 28636537 28636977 -60867576 - MER113 DNA MER1_type? -42 479 20 301 344 0 41 chr17 28637358 28637480 -60867073 + L2 LINE L2 2458 2574 -740 206 392 12 48 chr17 28637806 28637972 -60866581 + MIR SINE MIR 66 225 -37 * 219 402 10 0 chr17 28637949 28638046 -60866507 + L2 LINE L2 3200 3297 -16 1140 294 36 13 chr17 28640279 28640806 -60863747 - L1MD3 LINE L1 -1978 6017 5479 219 250 204 38 chr17 28645521 28645653 -60858900 + MIR SINE MIR 90 243 -19 343 230 14 93 chr17 28646262 28646401 -60858152 - L1 LINE L1 -2784 3362 3235 2076 157 21 3 chr17 28646710 28647048 -60857505 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 28647128 28647153 -60857400 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 1670 138 110 51 chr17 28647495 28647849 -60856704 - THE1C LTR MaLR 0 375 1 2001 138 0 3 chr17 28648751 28649056 -60855497 + AluSc SINE Alu 1 304 -5 1543 195 19 7 chr17 28649440 28649747 -60854806 + AluSx SINE Alu 1 311 -1 1080 198 0 0 chr17 28649821 28650013 -60854540 + AluSg/x SINE Alu 103 294 -16 589 225 0 23 chr17 28650666 28650795 -60853758 - L2 LINE L2 0 3313 3188 2170 100 7 3 chr17 28651292 28651582 -60852971 - AluSg SINE Alu -19 291 1 1807 126 0 8 chr17 28652293 28652548 -60852005 - AluSx SINE Alu -21 291 39 25 0 0 0 chr17 28652941 28652966 -60851587 + AT_rich Low_complexity Low_complexity 1 25 0 2100 92 0 7 chr17 28653293 28653574 -60850979 + AluY SINE Alu 1 279 -32 1230 179 5 18 chr17 28653620 28653838 -60850715 - AluJb SINE Alu -32 280 66 285 136 0 0 chr17 28653838 28653882 -60850671 - FLAM_A SINE Alu -22 111 68 880 104 0 0 chr17 28654371 28654486 -60850067 + AluSq SINE Alu 1 115 -197 2319 182 65 7 chr17 28654496 28654940 -60849613 + MER9 LTR ERVK 38 507 -4 5624 200 29 31 chr17 28654945 28656306 -60848247 + HERVK14 LTR ERVK 4 1381 -4564 5925 152 88 40 chr17 28656306 28657515 -60847038 - MER11A LTR ERVK 0 1266 1 8104 72 1 0 chr17 28657516 28658511 -60846042 - HERVK11 LTR ERVK -1 7952 6957 * 28630 83 6 2 chr17 28658496 28665168 -60839385 - HERVK11 LTR ERVK -1186 6767 1 4239 163 27 41 chr17 28665168 28666027 -60838526 - MER11C LTR ERVK 0 1071 225 1890 77 0 0 chr17 28666422 28666656 -60837897 - MER11B LTR ERVK -1002 234 1 28236 130 4 1 chr17 28666656 28670711 -60833842 + HERVK9 LTR ERVK 1121 5186 -730 566 301 5 19 chr17 28670682 28670898 -60833655 + HERVK9 LTR ERVK 5801 6013 -1739 * 3084 102 0 26 chr17 28670913 28671343 -60833210 + HERVK9 LTR ERVK 5183 5601 -315 1874 254 27 27 chr17 28671441 28672360 -60832193 + HERVK9 LTR ERVK 5635 5916 0 2268 186 62 9 chr17 28672367 28672819 -60831734 + MER9 LTR ERVK 34 509 -2 1111 168 20 10 chr17 28672821 28673082 -60831471 + AluSq SINE Alu 109 371 0 1346 109 0 26 chr17 28673120 28673312 -60831241 + AluSx SINE Alu 3 189 -123 818 144 30 8 chr17 28673314 28673446 -60831107 - AluSq SINE Alu -147 166 32 21 0 0 0 chr17 28674631 28674652 -60829901 + AT_rich Low_complexity Low_complexity 1 21 0 331 266 97 26 chr17 28674673 28674827 -60829726 - Tigger8 DNA MER2_type -165 501 337 2381 101 0 0 chr17 28674991 28675297 -60829256 - AluY SINE Alu -5 306 1 243 0 0 0 chr17 28675681 28675708 -60828845 + (TG)n Simple_repeat Simple_repeat 2 28 0 255 318 117 45 chr17 28675720 28675899 -60828654 - MIR SINE MIR -51 211 20 230 313 10 21 chr17 28675943 28676039 -60828514 + Tigger8 DNA MER2_type 141 235 -431 1750 165 7 10 chr17 28676049 28676340 -60828213 + AluJb SINE Alu 1 290 -22 2120 132 0 0 chr17 28676634 28676921 -60827632 - AluSc SINE Alu -22 287 1 2213 109 7 0 chr17 28677060 28677353 -60827200 - AluSc SINE Alu -14 295 1 2026 129 0 7 chr17 28677784 28678070 -60826483 + AluSg SINE Alu 3 286 -24 36 53 0 0 chr17 28679450 28679507 -60825046 + AT_rich Low_complexity Low_complexity 1 57 0 376 276 113 13 chr17 28679650 28679963 -60824590 - L1ME4a LINE L1 -194 5927 5571 213 39 0 0 chr17 28680130 28680156 -60824397 + (CA)n Simple_repeat Simple_repeat 1 26 0 210 367 140 10 chr17 28681062 28681269 -60823284 + L2 LINE L2 987 1220 -2094 2058 132 0 0 chr17 28681281 28681596 -60822957 + AluSg SINE Alu 2 316 0 2172 117 0 0 chr17 28681780 28682070 -60822483 - AluY SINE Alu -21 290 1 234 269 0 0 chr17 28682123 28682175 -60822378 + LTR30 LTR ERV1 1 52 -670 805 128 231 213 chr17 28682214 28682642 -60821911 + LTR12 LTR ERV1 48 483 -231 5874 133 9 36 chr17 28682659 28683629 -60820924 + HERV9 LTR ERV1 54 997 -7402 * 21891 111 10 5 chr17 28683625 28687985 -60816568 + HERV9 LTR ERV1 1155 5613 -2786 16539 115 5 15 chr17 28687977 28688344 -60816209 + HERV9 LTR ERV1 5972 6341 -2058 * 2062 53 16 0 chr17 28688344 28688589 -60815964 - L1PA5 LINE L1 -6 6148 5900 16539 115 5 15 chr17 28688589 28690674 -60813879 + HERV9 LTR ERV1 6341 8399 0 816 164 79 141 chr17 28690674 28690978 -60813575 + LTR12 LTR ERV1 1 285 -429 355 178 33 22 chr17 28690979 28691069 -60813484 + LTR30 LTR ERV1 553 643 -79 656 130 0 0 chr17 28691071 28691171 -60813382 + LTR12 LTR ERV1 615 714 0 226 309 147 33 chr17 28691322 28691594 -60812959 + L2 LINE L2 1791 2093 -1221 382 256 78 0 chr17 28691596 28691686 -60812867 - MER117 DNA MER1_type -97 100 4 725 161 17 0 chr17 28692211 28692329 -60812224 + FLAM_A SINE Alu 20 139 -3 311 326 121 23 chr17 28692429 28692644 -60811909 + MIR SINE MIR 3 238 -24 2072 114 7 3 chr17 28692728 28693018 -60811535 + AluSc SINE Alu 1 291 -18 2106 110 0 14 chr17 28693148 28693438 -60811115 - AluSx SINE Alu -26 286 1 319 339 15 39 chr17 28693621 28693751 -60810802 - L2 LINE L2 -1 3271 3145 219 362 35 26 chr17 28693837 28693953 -60810600 - L2 LINE L2 -177 3095 2979 4443 217 52 64 chr17 28694227 28696104 -60808449 - L1ME1 LINE L1 -5 6161 4261 4562 81 242 0 chr17 28696104 28696769 -60807784 + LTR12 LTR ERV1 1 826 0 4443 217 52 64 chr17 28696769 28696816 -60807737 - L1ME1 LINE L1 -1905 4261 4215 369 98 0 216 chr17 28696816 28696918 -60807635 + MADE1 DNA Mariner 1 80 0 4443 217 52 64 chr17 28696918 28697220 -60807333 - L1ME1 LINE L1 -1951 4215 3976 277 258 40 53 chr17 28697266 28697417 -60807136 - L1MD3 LINE L1 -14 7981 7833 245 257 53 71 chr17 28697589 28697702 -60806851 - MIR SINE MIR -80 128 18 839 171 0 7 chr17 28697884 28698024 -60806529 + FRAM SINE Alu 23 161 -15 1876 145 3 14 chr17 28698027 28698163 -60806390 + AluSx SINE Alu 1 137 -175 2138 124 7 10 chr17 28698163 28698462 -60806091 + AluSp SINE Alu 1 298 -15 1876 145 3 14 chr17 28698462 28698614 -60805939 + AluSx SINE Alu 137 286 -26 423 0 0 0 chr17 28698621 28698668 -60805885 + (TA)n Simple_repeat Simple_repeat 1 47 0 751 171 0 0 chr17 28698777 28698894 -60805659 + AluSq SINE Alu 117 233 -80 670 95 0 0 chr17 28698894 28698978 -60805575 - AluS SINE Alu -215 97 14 7446 58 37 0 chr17 28698988 28699993 -60804560 - L1PA8 LINE L1 -3 6169 5152 469 329 74 0 chr17 28700320 28700469 -60804084 - L2 LINE L2 0 3272 3113 1843 221 7 9 chr17 28701457 28701906 -60802647 + L1MC2 LINE L1 4759 5206 -940 2047 126 4 0 chr17 28701907 28702217 -60802336 + AluSg SINE Alu 5 315 0 2919 189 89 9 chr17 28702217 28702910 -60801643 + L1MC2 LINE L1 5596 6344 0 283 240 130 0 chr17 28703103 28703203 -60801350 + L1ME4a LINE L1 5971 6083 -38 220 211 26 0 chr17 28703455 28703531 -60801022 + (CTTA)n Simple_repeat Simple_repeat 2 79 0 296 125 0 28 chr17 28705284 28705356 -60799197 - L1MD1 LINE L1 0 6242 6173 924 178 11 23 chr17 28705357 28705531 -60799022 + FRAM SINE Alu 1 172 -4 4483 171 42 12 chr17 28705553 28705817 -60798736 + Tigger1 DNA MER2_type 14 269 -2149 1794 166 4 4 chr17 28705817 28706149 -60798404 - AluJb SINE Alu 0 337 6 4483 171 42 12 chr17 28706149 28706725 -60797828 + Tigger1 DNA MER2_type 269 880 -1538 1106 90 0 0 chr17 28706726 28706860 -60797693 + AluSg SINE Alu 1 134 -176 2125 134 0 0 chr17 28706860 28707170 -60797383 + AluSx SINE Alu 1 310 0 7243 119 19 1 chr17 28707170 28708306 -60796247 + Tigger1 DNA MER2_type 870 2026 -392 398 317 70 0 chr17 28708306 28708448 -60796105 + MIR SINE MIR 110 261 -1 2237 110 3 3 chr17 28708575 28708876 -60795677 - AluSq SINE Alu -12 301 1 2022 139 3 10 chr17 28709081 28709384 -60795169 + AluSx SINE Alu 1 301 -11 1773 145 53 11 chr17 28709393 28709676 -60794877 + AluSx SINE Alu 1 295 -17 1739 152 11 20 chr17 28709677 28710026 -60794527 - L1MB4 LINE L1 -7 6173 5828 1977 115 56 0 chr17 28710028 28710297 -60794256 - AluSx SINE Alu -28 284 1 1114 274 146 15 chr17 28710542 28710600 -60793953 - L1ME3 LINE L1 -3 6159 6110 1760 180 7 3 chr17 28710600 28710895 -60793658 - AluJo SINE Alu -16 296 1 1114 274 146 15 chr17 28710895 28711358 -60793195 - L1ME3 LINE L1 -52 6110 5570 304 113 0 70 chr17 28711361 28711432 -60793121 - Alu SINE Alu 0 302 237 259 137 78 0 chr17 28711486 28711537 -60793016 - MLT1D LTR MaLR -49 456 402 333 282 55 55 chr17 28711908 28712089 -60792464 - MIR SINE MIR -72 190 10 1609 187 93 50 chr17 28712169 28712362 -60792191 - MLT1D LTR MaLR -49 456 273 1856 165 0 16 chr17 28712362 28712677 -60791876 + AluJb SINE Alu 3 312 0 1609 187 93 50 chr17 28712677 28712901 -60791652 - MLT1D LTR MaLR -232 273 21 328 262 13 54 chr17 28713018 28713167 -60791386 - L1MC4a LINE L1 -1954 5854 5712 1530 213 0 20 chr17 28713250 28713555 -60790998 + AluJo SINE Alu 1 299 -13 207 366 24 0 chr17 28714013 28714095 -60790458 - MIR SINE MIR -132 130 47 527 226 61 38 chr17 28714325 28714537 -60790016 - L1MC5 LINE L1 -44 7917 7701 1593 170 46 21 chr17 28714544 28714827 -60789726 - AluJb SINE Alu -22 290 1 748 230 47 72 chr17 28714869 28715104 -60789449 + MER102b DNA MER1_type 106 334 -7 480 244 25 75 chr17 28715351 28715511 -60789042 - MIR SINE MIR -79 183 32 1718 158 20 20 chr17 28717591 28717889 -60786664 - AluJo SINE Alu -14 298 1 544 274 37 37 chr17 28717892 28718137 -60786416 - Tigger8 DNA MER2_type -186 480 236 2213 97 56 0 chr17 28719093 28719434 -60785119 + L1PA11 LINE L1 5805 6164 -10 1592 109 0 0 chr17 28719440 28719642 -60784911 + AluSq SINE Alu 5 206 -107 333 102 0 0 chr17 28719642 28719691 -60784862 + AluSq SINE Alu 241 289 -11 21 0 0 0 chr17 28719701 28719722 -60784831 + AT_rich Low_complexity Low_complexity 1 21 0 530 264 54 18 chr17 28720379 28720546 -60784007 + MIR SINE MIR 20 192 -70 298 224 50 162 chr17 28720557 28720659 -60783894 + Charlie8 DNA MER1_type 1 113 -217 687 205 0 0 chr17 28720659 28720781 -60783772 + FLAM_A SINE Alu 1 122 -11 298 224 50 162 chr17 28720781 28720937 -60783616 + Charlie8 DNA MER1_type 113 230 -100 224 359 21 0 chr17 28721891 28722033 -60782520 + L2 LINE L2 2906 3050 -222 253 294 22 14 chr17 28722501 28722621 -60781932 + MIR SINE MIR 15 134 -74 338 277 21 0 chr17 28726060 28726154 -60778399 + MER5A DNA MER1_type 17 112 -77 544 258 7 26 chr17 28727821 28727976 -60776577 - MER103 DNA DNA -12 154 3 734 231 214 31 chr17 28728035 28728395 -60776158 + L2 LINE L2 2888 3313 0 262 310 194 19 chr17 28728408 28728624 -60775929 + MIR SINE MIR 8 261 -1 236 257 40 0 chr17 28729450 28729524 -60775029 - L2 LINE L2 -60 3212 3136 407 293 29 0 chr17 28730439 28730579 -60773974 - MIR SINE MIR -77 185 42 352 305 65 7 chr17 28731605 28731759 -60772794 - MIR3 SINE MIR -26 182 20 236 262 213 18 chr17 28732365 28732529 -60772024 + L2 LINE L2 3118 3313 0 361 277 294 6 chr17 28732654 28732831 -60771722 + MIR SINE MIR 6 233 -29 183 80 0 0 chr17 28733269 28733294 -60771259 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 225 250 83 24 chr17 28733304 28733388 -60771165 - L2 LINE L2 -35 3237 3149 358 290 191 16 chr17 28733464 28733647 -60770906 + MIR SINE MIR 22 236 -26 421 329 127 4 chr17 28734780 28735008 -60769545 + MIR SINE MIR 2 257 -5 2019 121 13 30 chr17 28735173 28735478 -60769075 - AluSx SINE Alu -12 300 1 1554 131 177 0 chr17 28736955 28737215 -60767338 + AluSx SINE Alu 1 306 -6 1714 162 14 17 chr17 28738244 28738541 -60766012 - AluJo SINE Alu -16 296 1 807 243 74 102 chr17 28740179 28740388 -60764165 - MER113 DNA MER1_type? -42 479 266 2199 116 3 22 chr17 28740388 28740707 -60763846 + AluSp SINE Alu 1 313 0 807 243 74 102 chr17 28740707 28740970 -60763583 - MER113 DNA MER1_type? -255 266 20 184 392 20 0 chr17 28741855 28741957 -60762596 + MIR SINE MIR 79 182 -80 382 241 0 18 chr17 28742328 28742440 -60762113 - MER103 DNA DNA -15 151 42 1963 144 10 10 chr17 28742943 28743242 -60761311 + AluJo SINE Alu 1 299 -13 235 254 51 0 chr17 28743742 28743801 -60760752 + MER94 DNA DNA 4 65 -69 392 345 113 13 chr17 28743934 28744163 -60760390 - MIR SINE MIR -3 259 8 195 303 15 0 chr17 28744240 28744306 -60760247 - L3b LINE CR1 -238 1345 1279 421 225 193 66 chr17 28745243 28745368 -60759185 + MIR SINE MIR 38 146 -116 1737 156 3 73 chr17 28745368 28745519 -60759034 + AluJb SINE Alu 1 120 -192 2215 96 0 23 chr17 28745519 28745822 -60758731 + AluSx SINE Alu 14 309 -3 1737 156 3 73 chr17 28745822 28745984 -60758569 + AluJb SINE Alu 120 292 -20 421 225 193 66 chr17 28745984 28746071 -60758482 + MIR SINE MIR 146 262 0 198 265 76 98 chr17 28746049 28746181 -60758372 - L2 LINE L2 -10 3303 3175 * 2299 115 3 0 chr17 28746585 28746890 -60757663 + AluSx SINE Alu 5 310 -2 495 281 36 7 chr17 28746937 28747076 -60757477 - MIR SINE MIR -6 256 114 295 244 22 33 chr17 28747377 28747467 -60757086 + L2 LINE L2 3184 3272 0 621 181 56 7 chr17 28747806 28747950 -60756603 - L2 LINE L2 0 3313 3163 391 151 0 19 chr17 28748087 28748167 -60756386 - AluS SINE Alu -246 62 4 738 223 51 0 chr17 28748314 28748489 -60756064 - MER5A DNA MER1_type -4 185 2 337 335 132 7 chr17 28748612 28748764 -60755789 - MIR SINE MIR -71 191 21 353 288 88 65 chr17 28748923 28749093 -60755460 + MIR SINE MIR 86 259 -3 248 303 114 15 chr17 28749299 28749375 -60755178 - L2 LINE L2 -2 3270 3203 4878 116 35 13 chr17 28749375 28750141 -60754412 - LTR39 LTR ERV1 0 783 1 248 303 114 15 chr17 28750141 28750196 -60754357 - L2 LINE L2 -69 3203 3126 342 283 22 74 chr17 28750199 28750468 -60754085 - LTR39-int LTR ERV1 -58 8062 7808 318 348 37 29 chr17 28750539 28750783 -60753770 - LTR49-int LTR ERV1 -535 4419 4174 4428 88 4 128 chr17 28750910 28751394 -60753159 + LTR12 LTR ERV1 1 350 -364 2448 70 6 10 chr17 28751394 28751706 -60752847 + AluY SINE Alu 1 311 0 4428 88 4 128 chr17 28751706 28752031 -60752522 + LTR12 LTR ERV1 350 714 0 9152 145 63 49 chr17 28752917 28753440 -60751113 - LTR49-int LTR ERV1 -612 5571 5057 2393 71 0 13 chr17 28753440 28753751 -60750802 - AluY SINE Alu -4 307 1 9152 145 63 49 chr17 28753751 28755443 -60749110 - LTR49-int LTR ERV1 -1126 5057 2181 2054 143 0 7 chr17 28755443 28755743 -60748810 + AluJo SINE Alu 1 298 -14 9152 145 63 49 chr17 28755743 28755903 -60748650 - LTR49-int LTR ERV1 -4002 2181 2025 2423 212 34 58 chr17 28755933 28756636 -60747917 - LTR49-int LTR ERV1 -3019 3312 2627 1200 244 29 92 chr17 28756605 28756994 -60747559 - LTR49-int LTR ERV1 -3569 2377 2034 * 387 0 0 0 chr17 28756994 28757037 -60747516 + (CA)n Simple_repeat Simple_repeat 2 44 0 1200 244 29 92 chr17 28757037 28757225 -60747328 - LTR49-int LTR ERV1 -3912 2034 1836 464 63 16 0 chr17 28757225 28757288 -60747265 + MER57B LTR ERV1 1 64 -370 * 1293 101 53 0 chr17 28757286 28757475 -60747078 - MER57B LTR ERV1 -167 267 69 336 254 66 16 chr17 28759936 28760058 -60744495 + MER65A LTR ERV1 1 128 -317 232 346 9 0 chr17 28760184 28760291 -60744262 + MER65B LTR ERV1 262 369 -162 * 282 231 55 93 chr17 28760258 28760440 -60744113 + MER65A LTR ERV1 267 441 -4 287 362 0 21 chr17 28760452 28760593 -60743960 + MER65A-int LTR ERV1 12 149 -4722 375 161 0 103 chr17 28760989 28761076 -60743477 + LTR57-int LTR ERVL 323 400 -4943 782 151 5 87 chr17 28761106 28761291 -60743262 + MER65A-int LTR ERV1 618 787 -6750 372 120 80 0 chr17 28761354 28761429 -60743124 + LTR39 LTR ERV1 19 99 -684 6056 104 52 67 chr17 28761649 28761679 -60742874 - Tigger3b DNA MER2_type -1797 1231 1202 2574 121 6 3 chr17 28761679 28762042 -60742511 - THE1B LTR MaLR 0 364 1 6056 104 52 67 chr17 28762042 28763153 -60741400 - Tigger3b DNA MER2_type -1826 1202 106 4441 133 59 39 chr17 28763469 28764237 -60740316 + LTR39 LTR ERV1 1 783 0 1200 214 88 9 chr17 28764896 28765213 -60739340 + MER65A-int LTR ERV1 939 1280 -5051 2275 136 140 5 chr17 28765213 28765619 -60738934 + LTR8A LTR ERV1 1 461 -266 843 182 12 18 chr17 28765627 28765792 -60738761 + LTR8A LTR ERV1 564 727 0 335 251 1 0 chr17 28765792 28765883 -60738670 + LTR49-int LTR ERV1 746 1917 -2963 451 168 32 11 chr17 28765999 28766094 -60738459 + LTR49-int LTR ERV1 1372 1468 -4863 1200 105 0 0 chr17 28766094 28766266 -60738287 - MER57B LTR ERV1 0 434 263 233 346 9 0 chr17 28766291 28766398 -60738155 - MER65B LTR ERV1 -162 369 262 336 254 66 16 chr17 28766524 28766646 -60737907 - MER65A LTR ERV1 -317 128 1 217 198 30 119 chr17 28767122 28767223 -60737330 - L2 LINE L2 -179 3134 3043 281 81 48 65 chr17 28767223 28767285 -60737268 - Alu SINE Alu -7 294 234 756 237 8 71 chr17 28767311 28767564 -60736989 - L2 LINE L2 -1537 1777 1541 180 256 0 0 chr17 28767558 28767601 -60736952 + L3 LINE CR1 1408 1450 -127 * 1796 154 29 20 chr17 28768119 28768310 -60736243 - AluJo SINE Alu -2 310 113 369 0 0 0 chr17 28768310 28768351 -60736202 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1796 154 29 20 chr17 28768351 28768465 -60736088 - AluJo SINE Alu -199 113 2 209 191 0 0 chr17 28768621 28768663 -60735890 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 464 313 110 0 chr17 28768717 28768880 -60735673 + MIR SINE MIR 2 182 -80 992 292 102 33 chr17 28768903 28769324 -60735229 - L2 LINE L2 0 3313 2864 525 200 48 24 chr17 28772290 28772415 -60732138 + MER45A DNA AcHobo 51 178 0 373 361 89 9 chr17 28772625 28772838 -60731715 - MIR SINE MIR -16 246 17 252 0 0 0 chr17 28773155 28773183 -60731370 + (CA)n Simple_repeat Simple_repeat 2 29 0 687 254 17 6 chr17 28774099 28774272 -60730281 + MIR SINE MIR 5 179 -83 593 269 23 29 chr17 28774444 28774615 -60729938 - MER5B DNA MER1_type -8 170 1 195 152 0 0 chr17 28774650 28774683 -60729870 + MIR3 SINE MIR 170 202 -6 2092 140 3 3 chr17 28774697 28775005 -60729548 + AluJo SINE Alu 1 308 -4 2200 114 6 16 chr17 28775162 28775478 -60729075 + AluSq SINE Alu 1 313 0 856 231 18 74 chr17 28775617 28775846 -60728707 - MIR SINE MIR -3 259 44 299 291 209 0 chr17 28776132 28776266 -60728287 + MIR3 SINE MIR 38 199 -9 285 190 215 13 chr17 28776303 28776382 -60728171 - MIR SINE MIR -34 228 134 294 51 0 0 chr17 28776382 28776421 -60728132 - MADE1 DNA Mariner 0 80 42 303 93 0 0 chr17 28777208 28777251 -60727302 + (CA)n Simple_repeat Simple_repeat 1 43 0 597 306 102 0 chr17 28777374 28777580 -60726973 - L3 LINE CR1 -2 1575 1349 300 265 31 20 chr17 28778752 28778850 -60725703 - MIR3 SINE MIR -22 186 88 189 107 0 0 chr17 28779101 28779129 -60725424 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 2054 142 0 0 chr17 28779133 28779421 -60725132 - AluJb SINE Alu -24 288 1 572 183 61 61 chr17 28779490 28779670 -60724883 - L1MC5 LINE L1 -30 7931 7752 22 88 0 0 chr17 28779734 28779791 -60724762 + AT_rich Low_complexity Low_complexity 1 57 0 2894 146 6 10 chr17 28780280 28780767 -60723786 + MER31A LTR ERV1 1 485 0 306 0 0 0 chr17 28780800 28780834 -60723719 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 373 296 136 15 chr17 28781269 28781468 -60723085 + L1ME4a LINE L1 5895 6117 -4 1728 126 24 38 chr17 28781724 28782017 -60722536 + AluJb SINE Alu 1 289 -23 23 0 0 0 chr17 28782798 28782821 -60721732 + GC_rich Low_complexity Low_complexity 1 23 0 305 264 14 0 chr17 28783136 28783208 -60721345 - MIR SINE MIR -110 152 80 378 107 0 0 chr17 28783717 28783773 -60720780 + (CA)n Simple_repeat Simple_repeat 2 57 0 185 295 369 0 chr17 28784287 28784409 -60720144 + MIR SINE MIR 1 167 -95 672 269 25 0 chr17 28784629 28784789 -60719764 + MIR SINE MIR 39 202 -60 271 240 13 13 chr17 28785092 28785167 -60719386 + FLAM_A SINE Alu 58 132 -1 180 111 0 0 chr17 28785170 28785197 -60719356 + (GAAAA)n Simple_repeat Simple_repeat 5 31 0 1992 138 10 16 chr17 28785201 28785506 -60719047 + AluSx SINE Alu 6 308 -4 247 296 28 74 chr17 28786041 28786257 -60718296 + L2 LINE L2 2840 3045 -227 724 275 92 0 chr17 28786339 28786557 -60717996 - MIR SINE MIR -12 250 13 279 331 47 60 chr17 28786820 28787079 -60717474 + MIR SINE MIR 1 255 -7 405 308 101 0 chr17 28787093 28787262 -60717291 - MIR SINE MIR -17 245 60 1409 147 9 18 chr17 28788586 28788810 -60715743 + AluJo SINE Alu 1 222 -90 291 184 35 11 chr17 28788818 28788905 -60715648 + GA-rich Low_complexity Low_complexity 3 91 0 384 235 96 37 chr17 28788923 28789059 -60715494 + MIR SINE MIR 47 190 -72 180 0 0 0 chr17 28789628 28789648 -60714905 + (T)n Simple_repeat Simple_repeat 1 20 0 1884 161 0 7 chr17 28790276 28790590 -60713963 - AluSx SINE Alu 0 312 1 278 237 26 0 chr17 28790968 28791044 -60713509 - MER34B LTR ERV1 -159 406 329 236 153 17 68 chr17 28791342 28791401 -60713152 - MIR SINE MIR -59 203 148 673 252 38 4 chr17 28791618 28791844 -60712709 - MER34B LTR ERV1 -4 561 325 1628 148 69 31 chr17 28791844 28792135 -60712418 + AluJo SINE Alu 1 302 -10 673 252 38 4 chr17 28792135 28792146 -60712407 - MER34B LTR ERV1 -240 325 316 618 14 0 0 chr17 28792146 28792217 -60712336 + (GGAAA)n Simple_repeat Simple_repeat 1 71 0 539 259 112 79 chr17 28792236 28792568 -60711985 - MER34 LTR ERV1 -222 343 1 325 311 48 0 chr17 28792579 28792682 -60711871 + MIR SINE MIR 47 154 -108 432 193 18 0 chr17 28792934 28793048 -60711505 - L1MB4 LINE L1 0 6180 6065 629 244 101 0 chr17 28793666 28793862 -60710691 - MIR SINE MIR -21 241 18 762 203 46 46 chr17 28793882 28794117 -60710436 - MIR SINE MIR -35 227 2 377 229 38 8 chr17 28794302 28794433 -60710120 - MER113 DNA MER1_type? -366 155 21 185 317 29 19 chr17 28794471 28794575 -60709978 + MIR3 SINE MIR 83 187 -21 821 271 93 16 chr17 28795026 28795347 -60709206 - LTR16C LTR ERVL -40 451 106 1922 153 0 33 chr17 28795903 28796203 -60708350 + AluJb SINE Alu 1 290 -22 816 172 43 37 chr17 28796211 28796374 -60708179 + FRAM SINE Alu 1 161 -15 329 272 224 0 chr17 28796448 28796573 -60707980 + L1ME4a LINE L1 5966 6118 -3 339 273 84 35 chr17 28797119 28797262 -60707291 + MIR SINE MIR 37 186 -76 590 267 67 6 chr17 28797454 28797619 -60706934 - MIR SINE MIR -56 206 32 431 254 82 100 chr17 28798071 28798402 -60706151 + L2 LINE L2 2932 3256 -16 3543 171 35 22 chr17 28798402 28799119 -60705434 - L1MB7 LINE L1 -14 6170 5445 387 0 0 0 chr17 28799154 28799197 -60705356 + (TGGA)n Simple_repeat Simple_repeat 2 44 0 229 339 0 43 chr17 28799938 28800053 -60704500 + MER117 DNA MER1_type 8 117 -80 270 292 22 22 chr17 28800364 28800453 -60704100 + MIR SINE MIR 90 178 -84 1955 153 7 3 chr17 28801727 28802028 -60702525 - AluJo SINE Alu -10 302 1 760 212 45 76 chr17 28802028 28802120 -60702433 - L1MB7 LINE L1 -749 5397 5304 2033 127 38 0 chr17 28802120 28802411 -60702142 - AluSx SINE Alu -10 302 1 760 212 45 76 chr17 28802411 28802606 -60701947 - L1MB7 LINE L1 -842 5304 5119 213 343 56 0 chr17 28802625 28802733 -60701820 - L2 LINE L2 -262 3010 2897 2528 112 38 67 chr17 28802742 28802966 -60701587 - Tigger2a DNA MER2_type -2274 434 228 1739 158 13 47 chr17 28802966 28803264 -60701289 + AluJo SINE Alu 1 288 -24 2528 112 38 67 chr17 28803264 28803486 -60701067 - Tigger2a DNA MER2_type -2480 228 1 2365 136 32 25 chr17 28803569 28803974 -60700579 - MSTB LTR MaLR 0 426 19 1822 150 3 33 chr17 28804193 28804499 -60700054 + AluJb SINE Alu 1 297 -15 192 40 0 0 chr17 28804615 28804640 -60699913 + (CA)n Simple_repeat Simple_repeat 1 25 0 584 275 69 0 chr17 28804918 28805107 -60699446 - MIR SINE MIR -8 254 53 353 330 24 28 chr17 28805118 28805330 -60699223 - L2 LINE L2 -801 2513 2303 2316 117 95 35 chr17 28805389 28805746 -60698807 + MSTA LTR MaLR 1 386 -42 2084 138 10 0 chr17 28805746 28806050 -60698503 - AluSx SINE Alu -5 307 1 2316 117 95 35 chr17 28806050 28806093 -60698460 + MSTA LTR MaLR 386 425 -3 194 274 0 0 chr17 28806766 28806817 -60697736 + L2 LINE L2 3261 3311 -2 809 277 93 27 chr17 28806883 28807248 -60697305 + L2 LINE L2 2925 3313 0 1646 232 65 34 chr17 28808259 28808567 -60695986 + L1ME3 LINE L1 4884 5181 -981 1745 155 3 47 chr17 28808567 28808884 -60695669 + AluJo SINE Alu 1 303 -9 1646 232 65 34 chr17 28808884 28809257 -60695296 + L1ME3 LINE L1 5181 5596 -566 357 171 154 57 chr17 28809269 28809392 -60695161 + L1ME3 LINE L1 5657 5791 -379 602 248 15 0 chr17 28809514 28809647 -60694906 + MER58B DNA MER1_type 207 341 0 332 244 12 12 chr17 28809652 28809738 -60694815 + L1ME3 LINE L1 5807 5892 -278 1004 161 0 0 chr17 28809743 28809898 -60694655 + AluSg/x SINE Alu 140 294 -18 879 227 104 20 chr17 28809898 28810149 -60694404 + L1ME3 LINE L1 5885 6156 -6 505 301 11 16 chr17 28810404 28810590 -60693963 - MER5A DNA MER1_type -3 186 2 6723 125 18 20 chr17 28810828 28811902 -60692651 - MER11C LTR ERVK 0 1071 1 2223 105 6 19 chr17 28812103 28812416 -60692137 - AluSg SINE Alu 0 310 2 253 266 0 0 chr17 28812629 28812693 -60691860 + L1MC/D LINE L1 5827 5890 -1918 1501 181 0 65 chr17 28812855 28813165 -60691388 - AluJo SINE Alu -22 290 1 191 200 0 20 chr17 28813240 28813290 -60691263 + GA-rich Low_complexity Low_complexity 4 52 0 412 299 183 0 chr17 28813731 28813928 -60690625 + MIR SINE MIR 24 256 -6 424 221 122 0 chr17 28814157 28814288 -60690265 + MER103 DNA DNA 14 160 -6 211 329 161 13 chr17 28814507 28814656 -60689897 + MIR SINE MIR 20 190 -72 320 202 46 101 chr17 28814711 28814820 -60689733 - MLT1K LTR MaLR 0 588 486 1718 169 43 10 chr17 28815437 28815738 -60688815 - AluJb SINE Alu -1 311 1 802 238 72 78 chr17 28815738 28816045 -60688508 - L1ME3 LINE L1 -55 6107 5803 292 300 11 0 chr17 28816105 28816195 -60688358 + L1M4 LINE L1 4007 4097 -2049 1629 166 7 43 chr17 28816209 28816511 -60688042 + AluJo SINE Alu 11 301 -11 422 234 86 16 chr17 28816545 28816673 -60687880 + MIR3 SINE MIR 42 178 -30 681 115 88 0 chr17 28816718 28816831 -60687722 + L1MB4 LINE L1 5836 5958 -222 2210 206 226 13 chr17 28816847 28817918 -60686635 + L1 LINE L1 3254 4722 -1424 731 234 5 16 chr17 28817934 28818118 -60686435 + MIR SINE MIR 81 262 0 360 254 66 16 chr17 28820577 28820699 -60683854 + MER65B LTR ERV1 1 128 -403 231 293 47 28 chr17 28820825 28820931 -60683622 + MER65B LTR ERV1 262 369 -162 * 311 231 55 93 chr17 28820898 28821080 -60683473 + MER65A LTR ERV1 267 441 -4 297 339 57 21 chr17 28821092 28821284 -60683269 + MER65A-int LTR ERV1 12 210 -4661 396 161 0 103 chr17 28821629 28821716 -60682837 + LTR57-int LTR ERVL 323 400 -4943 804 151 5 87 chr17 28821746 28821931 -60682622 + MER65A-int LTR ERV1 618 787 -6750 397 120 80 0 chr17 28821994 28822069 -60682484 + LTR39 LTR ERV1 19 99 -684 6464 102 52 67 chr17 28822289 28822319 -60682234 - Tigger3b DNA MER2_type -1797 1231 1202 2544 121 6 3 chr17 28822319 28822682 -60681871 - THE1B LTR MaLR 0 364 1 6464 102 52 67 chr17 28822682 28823793 -60680760 - Tigger3b DNA MER2_type -1826 1202 106 4367 134 59 39 chr17 28824109 28824877 -60679676 + LTR39 LTR ERV1 1 783 0 1296 214 88 9 chr17 28825536 28825853 -60678700 + MER65A-int LTR ERV1 939 1280 -5051 2366 136 140 5 chr17 28825853 28826259 -60678294 + LTR8A LTR ERV1 1 461 -266 890 182 12 18 chr17 28826267 28826432 -60678121 + LTR8A LTR ERV1 564 727 0 372 153 178 59 chr17 28826432 28826550 -60678003 + MER65A-int LTR ERV1 1277 1917 -2963 481 168 32 11 chr17 28826639 28826734 -60677819 + LOR1-int LTR ERV1 1372 1468 -4863 1260 105 0 0 chr17 28826734 28826906 -60677647 - MER57B LTR ERV1 0 434 263 373 270 101 62 chr17 28826931 28827286 -60677267 - MER65B LTR ERV1 -162 369 1 1373 101 53 0 chr17 28829746 28829935 -60674618 + MER57B LTR ERV1 69 267 -167 489 63 16 0 chr17 28829933 28829996 -60674557 - MER57B LTR ERV1 -370 64 1 * 1324 244 29 92 chr17 28829996 28830184 -60674369 + LOR1-int LTR ERV1 1836 2034 -3912 423 0 0 0 chr17 28830184 28830231 -60674322 + (TG)n Simple_repeat Simple_repeat 2 48 0 1324 244 29 92 chr17 28830231 28830620 -60673933 + LOR1-int LTR ERV1 2034 2377 -3569 * 2582 212 34 58 chr17 28830589 28831292 -60673261 + LOR1-int LTR ERV1 2627 3312 -3019 9720 153 58 57 chr17 28831308 28831482 -60673071 + LOR1-int LTR ERV1 2025 2197 -3986 2024 143 0 7 chr17 28831482 28831782 -60672771 - AluJo SINE Alu -14 298 1 9720 153 58 57 chr17 28831782 28833469 -60671084 + LOR1-int LTR ERV1 2197 3881 -2302 2378 71 0 13 chr17 28833469 28833780 -60670773 + AluY SINE Alu 1 307 -4 9720 153 58 57 chr17 28833780 28834303 -60670250 + LOR1-int LTR ERV1 3881 5571 -612 5940 83 37 17 chr17 28835189 28835514 -60669039 - LTR12 LTR ERV1 0 826 509 2359 77 6 10 chr17 28835514 28835826 -60668727 - AluY SINE Alu 0 311 1 5940 83 37 17 chr17 28835826 28836310 -60668243 - LTR12 LTR ERV1 -317 509 1 313 328 41 33 chr17 28836437 28836681 -60667872 + LOR1-int LTR ERV1 4174 4419 -535 362 279 22 74 chr17 28836752 28837021 -60667532 + LOR1-int LTR ERV1 7808 8062 -58 214 303 114 15 chr17 28837024 28837079 -60667474 + L2 LINE L2 3126 3174 -98 5135 116 35 13 chr17 28837079 28837845 -60666708 + LTR39 LTR ERV1 1 783 0 214 303 114 15 chr17 28837845 28837921 -60666632 + L2 LINE L2 3174 3270 -2 308 288 88 65 chr17 28838127 28838297 -60666256 - MIR SINE MIR -3 259 86 343 373 8 8 chr17 28838456 28838574 -60665979 + MIR SINE MIR 21 138 -124 758 223 51 0 chr17 28838731 28838906 -60665647 + MER5A DNA MER1_type 2 185 -4 1997 145 3 7 chr17 28839080 28839384 -60665169 + AluJb SINE Alu 10 312 0 21 36 0 0 chr17 28839575 28839603 -60664950 + AT_rich Low_complexity Low_complexity 1 28 0 1802 125 0 0 chr17 28839942 28840182 -60664371 - AluSg SINE Alu -14 296 57 511 250 39 32 chr17 28840186 28840342 -60664211 + MER63A DNA MER1_type 54 210 0 473 224 45 37 chr17 28840498 28840632 -60663921 - MER5B DNA MER1_type -30 148 14 1102 138 48 0 chr17 28840745 28840934 -60663619 - L1MA9 LINE L1 -1 6311 6114 265 306 72 0 chr17 28841928 28842039 -60662514 - MIR SINE MIR -46 216 98 2743 210 22 82 chr17 28842065 28842750 -60661803 - L1ME1 LINE L1 -195 5971 5339 1473 175 20 10 chr17 28842750 28843042 -60661511 - L1MB3 LINE L1 -2 6181 5887 2743 210 22 82 chr17 28843042 28843164 -60661389 - L1ME1 LINE L1 -827 5339 5211 1117 110 0 0 chr17 28843174 28843329 -60661224 - AluSg/x SINE Alu -6 304 150 1245 241 37 49 chr17 28843329 28843760 -60660793 + L2 LINE L2 2868 3293 -20 613 305 13 89 chr17 28843786 28843966 -60660587 - L2 LINE L2 -14 3258 3123 1342 196 77 25 chr17 28843966 28844293 -60660260 - MER2 DNA MER2_type 0 344 1 613 305 13 89 chr17 28844293 28844505 -60660048 - L2 LINE L2 -149 3123 2896 1816 168 0 7 chr17 28844729 28845015 -60659538 + AluJb SINE Alu 1 284 -28 222 105 0 0 chr17 28845015 28845053 -60659500 + (CTAA)n Simple_repeat Simple_repeat 3 40 0 1150 277 37 21 chr17 28845069 28845444 -60659109 + L1MC4a LINE L1 5517 5897 -1911 435 266 0 59 chr17 28846513 28846682 -60657871 - MIR SINE MIR -84 178 20 256 316 31 10 chr17 28847085 28847183 -60657370 + L3b LINE CR1 1294 1393 -190 2277 113 36 36 chr17 28847246 28847610 -60656943 + THE1B LTR MaLR 1 364 0 317 333 141 0 chr17 28848448 28848583 -60655970 - MIR SINE MIR -60 202 49 296 256 0 0 chr17 28849168 28849246 -60655307 + MIR SINE MIR 185 262 0 428 323 41 95 chr17 28849339 28849801 -60654752 + L2 LINE L2 2828 3264 -8 2057 136 3 3 chr17 28850732 28851033 -60653520 + AluSx SINE Alu 1 301 -11 353 331 54 0 chr17 28851311 28851495 -60653058 + MIR SINE MIR 34 227 -35 238 269 59 76 chr17 28851626 28851864 -60652689 - L2 LINE L2 -219 3053 2820 1858 169 0 3 chr17 28852660 28852973 -60651580 + AluJo SINE Alu 1 312 0 532 328 100 30 chr17 28852695 28853254 -60651299 - L1ME4a LINE L1 -38 6083 5772 438 288 50 31 chr17 28853339 28853499 -60651054 + MIR SINE MIR 53 215 -47 903 166 20 0 chr17 28853585 28853736 -60650817 - MER2 DNA MER2_type 0 345 192 2257 162 22 36 chr17 28853739 28853961 -60650592 - Tigger2a DNA MER2_type -2274 434 219 881 26 188 0 chr17 28853961 28854078 -60650475 + MER85 DNA T2_type 1 139 0 2257 162 22 36 chr17 28854078 28854268 -60650285 - Tigger2a DNA MER2_type -2489 219 28 986 172 6 0 chr17 28854280 28854454 -60650099 - MER2 DNA MER2_type -155 190 16 410 247 151 64 chr17 28854564 28854783 -60649770 + MIR SINE MIR 12 249 -13 2024 105 6 35 chr17 28854984 28855297 -60649256 + AluSq SINE Alu 1 304 -9 233 201 28 35 chr17 28855505 28855650 -60648903 + CT-rich Low_complexity Low_complexity 1 144 0 343 264 120 24 chr17 28855762 28855887 -60648666 - LTR33A LTR ERVL -2 521 385 613 259 204 15 chr17 28856250 28856473 -60648080 + MIR SINE MIR 2 244 -18 187 239 15 60 chr17 28856447 28856514 -60648039 - L2 LINE L2 -39 3274 3211 * 1068 230 94 19 chr17 28856762 28857113 -60647440 - L1MD2 LINE L1 -17 6149 5791 1494 166 25 11 chr17 28857235 28857513 -60647040 + AluJo SINE Alu 1 282 -30 539 157 20 177 chr17 28858069 28858216 -60646337 + FLAM_C SINE Alu 2 125 -18 570 242 30 4 chr17 28858441 28858584 -60645969 + MLT1H1 LTR MaLR 16 171 -378 2171 185 61 18 chr17 28858612 28859113 -60645440 + LTR27 LTR ERV1 3 501 0 869 219 62 33 chr17 28859150 28859465 -60645088 + MLT1H1 LTR MaLR 205 554 -1 4236 147 71 20 chr17 28859818 28860562 -60643991 + LTR39 LTR ERV1 2 783 0 302 304 11 0 chr17 28860597 28860689 -60643864 - MIR SINE MIR -14 248 156 224 221 195 0 chr17 28861138 28861215 -60643338 + MIR SINE MIR 84 175 -87 1679 164 11 0 chr17 28861327 28861614 -60642939 + AluJb SINE Alu 1 290 -22 4537 157 23 24 chr17 28861765 28862627 -60641926 - L1MB7 LINE L1 -16 6168 5308 423 38 0 0 chr17 28863144 28863197 -60641356 + (TG)n Simple_repeat Simple_repeat 1 53 0 210 147 0 0 chr17 28863429 28863463 -60641090 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 218 177 81 16 chr17 28863564 28863626 -60640927 + L2 LINE L2 3134 3199 -73 * 503 175 61 26 chr17 28863614 28863728 -60640825 - L2 LINE L2 -4 3268 3151 2167 52 24 21 chr17 28863819 28864109 -60640444 - AluY SINE Alu -20 291 1 266 263 151 22 chr17 28864971 28865150 -60639403 + L2 LINE L2 2776 2977 -337 2291 103 0 0 chr17 28865927 28866239 -60638314 + AluSx SINE Alu 1 312 0 378 235 39 20 chr17 28866361 28866463 -60638090 - MIR SINE MIR -131 131 28 195 234 0 64 chr17 28868058 28868105 -60636448 - MIR SINE MIR -198 64 21 210 254 0 0 chr17 28868192 28868251 -60636302 + A-rich Low_complexity Low_complexity 1 59 0 209 257 177 35 chr17 28869435 28869548 -60635005 - MIR SINE MIR -20 242 114 2261 88 7 0 chr17 28869968 28870275 -60634278 + AluSp SINE Alu 3 311 -2 1460 176 49 189 chr17 28870487 28870823 -60633730 - L1MD3 LINE L1 0 8042 7661 790 126 9 0 chr17 28870823 28870934 -60633619 - AluJ SINE Alu -18 294 183 750 175 33 0 chr17 28870942 28871062 -60633491 - AluJ SINE Alu -176 126 3 1460 176 49 189 chr17 28871062 28871324 -60633229 - L1MD3 LINE L1 -388 7654 7438 412 248 183 26 chr17 28872148 28872301 -60632252 + MER5A DNA MER1_type 10 186 -3 1671 148 78 0 chr17 28872399 28872683 -60631870 + AluSx SINE Alu 1 306 -6 565 198 19 0 chr17 28872732 28872838 -60631715 - MIR SINE MIR -126 136 29 315 0 0 0 chr17 28872845 28872880 -60631673 + (A)n Simple_repeat Simple_repeat 1 35 0 737 263 106 28 chr17 28872885 28873140 -60631413 - L1ME1 LINE L1 -7 6159 5885 325 268 99 0 chr17 28873436 28873578 -60630975 + L2 LINE L2 2899 3054 -218 186 269 115 0 chr17 28873768 28873820 -60630733 - MIR SINE MIR -60 148 91 605 294 167 46 chr17 28874056 28874438 -60630115 + MLT1K LTR MaLR 2 465 -123 1744 146 36 7 chr17 28874438 28874740 -60629813 + AluJo SINE Alu 1 311 -1 605 294 167 46 chr17 28874740 28874878 -60629675 + MLT1K LTR MaLR 465 585 -3 293 281 67 94 chr17 28875478 28875646 -60628907 + L2 LINE L2 2348 2519 -795 2401 78 13 0 chr17 28875646 28875955 -60628598 - AluSp SINE Alu 0 313 1 293 281 67 94 chr17 28875955 28876192 -60628361 + L2 LINE L2 2519 2742 -572 210 304 20 10 chr17 28876472 28876574 -60627979 + L2 LINE L2 2765 2867 -447 1458 172 59 92 chr17 28876672 28876723 -60627830 - MLT2D LTR ERVL 0 414 363 414 0 0 0 chr17 28876723 28876769 -60627784 + (TG)n Simple_repeat Simple_repeat 2 47 0 1458 172 59 92 chr17 28876769 28877142 -60627411 - MLT2D LTR ERVL -51 363 4 441 295 13 6 chr17 28877515 28877671 -60626882 + L1MC4 LINE L1 7793 7949 -93 407 304 129 51 chr17 28877749 28878282 -60626271 - L3 LINE CR1 -63 1514 940 2094 108 16 0 chr17 28878306 28878612 -60625941 - AluSq SINE Alu -2 311 1 888 244 53 5 chr17 28878961 28879170 -60625383 - MIR SINE MIR -31 231 13 372 297 306 0 chr17 28879161 28879390 -60625163 - L3 LINE CR1 -874 703 405 * 730 256 47 51 chr17 28880281 28880515 -60624038 + MIR SINE MIR 28 260 -2 774 303 18 5 chr17 28880711 28880932 -60623621 + MIR SINE MIR 21 244 -18 1713 183 10 3 chr17 28880937 28881238 -60623315 - AluJb SINE Alu -8 304 2 1645 163 31 25 chr17 28881510 28881836 -60622717 + L1MB8 LINE L1 5850 6177 -1 23 33 0 0 chr17 28882267 28882297 -60622256 + GC_rich Low_complexity Low_complexity 1 30 0 204 125 0 0 chr17 28883213 28883245 -60621308 + (T)n Simple_repeat Simple_repeat 1 32 0 252 242 32 21 chr17 28885619 28885714 -60618839 + GA-rich Low_complexity Low_complexity 3 98 0 194 263 18 18 chr17 28885881 28885938 -60618615 - L2 LINE L2 -9 3263 3207 * 255 307 195 12 chr17 28885932 28886173 -60618380 + L2 LINE L2 2606 2890 -424 1084 239 91 69 chr17 28886358 28886463 -60618090 - LTR16C LTR ERVL -6 485 384 1902 138 22 16 chr17 28886463 28886774 -60617779 + AluSq SINE Alu 1 313 0 1084 239 91 69 chr17 28886774 28887096 -60617457 - LTR16C LTR ERVL -107 384 12 241 258 0 15 chr17 28887106 28887172 -60617381 + (CATATA)n Simple_repeat Simple_repeat 5 69 0 646 255 121 15 chr17 28887260 28887582 -60616971 + L2 LINE L2 1012 1424 -1890 1648 110 4 0 chr17 28887658 28887895 -60616658 + AluSp SINE Alu 1 238 -75 696 92 0 0 chr17 28887900 28887998 -60616555 + AluSp/q SINE Alu 212 309 -4 264 333 31 0 chr17 28888002 28888131 -60616422 + L2 LINE L2 1545 1677 -1637 454 239 167 0 chr17 28888142 28888298 -60616255 + MER5A DNA MER1_type 4 189 0 398 321 194 17 chr17 28888429 28888722 -60615831 - L2 LINE L2 0 3313 2969 366 282 39 32 chr17 28888702 28888858 -60615695 + L2 LINE L2 1785 1941 -1373 * 1611 182 0 16 chr17 28888943 28889250 -60615303 + AluJb SINE Alu 1 302 -10 2239 110 0 0 chr17 28889252 28889560 -60614993 + AluSg SINE Alu 1 308 -2 7880 19 0 0 chr17 28889681 28890811 -60613742 - L1PA2 LINE L1 -6 6149 5020 4054 26 0 0 chr17 28890811 28891279 -60613274 + L1PA2 LINE L1 4535 5002 -1144 349 276 0 11 chr17 28891630 28891717 -60612836 - Tigger8 DNA MER2_type -550 116 31 1808 140 40 0 chr17 28891775 28892103 -60612450 - AluSx SINE Alu 0 340 1 1008 191 46 66 chr17 28892395 28892589 -60611964 + MER58B DNA MER1_type 106 296 -2124 2018 127 7 0 chr17 28892589 28892896 -60611657 + AluSx SINE Alu 1 309 -3 1008 191 46 66 chr17 28892896 28892942 -60611611 + MER58B DNA MER1_type 296 341 0 183 327 168 18 chr17 28896751 28896864 -60607689 - L2 LINE L2 -4 3268 3139 316 235 52 66 chr17 28897009 28897092 -60607461 - MIR SINE MIR -7 255 173 4174 107 28 28 chr17 28897092 28897534 -60607019 + MER41B LTR ERV1 1 445 -190 2009 129 3 0 chr17 28897534 28897828 -60606725 + AluSx SINE Alu 9 303 -9 4174 107 28 28 chr17 28897828 28898020 -60606533 + MER41B LTR ERV1 444 635 0 316 235 52 66 chr17 28898020 28898072 -60606481 - MIR SINE MIR -89 173 122 2025 99 0 3 chr17 28898073 28898382 -60606171 + AluSc SINE Alu 1 308 0 737 258 85 88 chr17 28898466 28898646 -60605907 + MLT1J LTR MaLR 25 204 -307 1455 175 40 15 chr17 28898646 28898920 -60605633 + AluJb SINE Alu 1 281 -31 237 98 0 0 chr17 28898925 28898966 -60605587 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 737 258 85 88 chr17 28898966 28899224 -60605329 + MLT1J LTR MaLR 208 468 -43 390 229 108 0 chr17 28899337 28899420 -60605133 - L2 LINE L2 -19 3294 3203 2010 68 64 0 chr17 28899879 28900166 -60604387 - AluSc SINE Alu 0 304 1 503 280 106 26 chr17 28900283 28900472 -60604081 + MIR SINE MIR 30 233 -29 2261 86 0 3 chr17 28900476 28900779 -60603774 - AluSq SINE Alu -11 302 1 4905 18 7 0 chr17 28901154 28901710 -60602843 - L1PA3 LINE L1 0 6155 5596 507 17 0 0 chr17 28901789 28901849 -60602704 + (CA)n Simple_repeat Simple_repeat 1 60 0 313 273 153 7 chr17 28901876 28902026 -60602527 + L2 LINE L2 2435 2606 -708 425 221 214 7 chr17 28902040 28902185 -60602368 + MER5A DNA MER1_type 9 183 -6 1507 124 4 4 chr17 28902293 28902519 -60602034 - AluSx SINE Alu -86 226 1 418 293 94 50 chr17 28902530 28902827 -60601726 - L1MEd LINE L1 -5567 552 243 235 0 0 0 chr17 28903006 28903032 -60601521 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2120 81 3 3 chr17 28903032 28903317 -60601236 - AluSp SINE Alu -1 310 1 288 368 14 7 chr17 28903422 28903566 -60600987 + L2 LINE L2 2683 2827 -487 615 175 23 128 chr17 28903656 28903724 -60600829 + Charlie5 DNA MER1_type 2356 2430 -155 1707 161 0 23 chr17 28903724 28904023 -60600530 - AluJo SINE Alu -20 292 1 615 175 23 128 chr17 28904023 28904092 -60600461 + Charlie5 DNA MER1_type 2430 2505 -80 2192 107 0 3 chr17 28904092 28904400 -60600153 - AluSg SINE Alu -3 307 1 615 175 23 128 chr17 28904400 28904423 -60600130 + Charlie5 DNA MER1_type 2505 2529 -56 750 157 16 0 chr17 28904423 28904544 -60600009 + FLAM_A SINE Alu 2 124 -9 615 175 23 128 chr17 28904544 28904638 -60599915 + Charlie5 DNA MER1_type 2529 2585 0 589 299 26 26 chr17 28905125 28905319 -60599234 + MIR SINE MIR 68 261 -1 846 173 0 0 chr17 28905576 28905709 -60598844 + FLAM_C SINE Alu 1 133 0 1923 108 56 95 chr17 28905729 28906119 -60598434 - THE1C LTR MaLR 0 375 1 834 197 0 0 chr17 28906125 28906277 -60598276 + AluJb SINE Alu 144 295 -17 324 165 29 107 chr17 28906417 28906520 -60598033 + LTR67 LTR ERVL 461 555 -2 277 154 19 0 chr17 28906775 28906827 -60597726 + MIR SINE MIR 80 132 -130 186 103 0 0 chr17 28906833 28906862 -60597691 + (CA)n Simple_repeat Simple_repeat 2 30 0 2160 96 0 0 chr17 28906862 28907154 -60597399 - AluSc SINE Alu -17 292 1 343 183 0 0 chr17 28907168 28907228 -60597325 - MLT2C1 LTR ERVL -51 346 287 * 440 203 42 70 chr17 28907178 28907321 -60597232 - MLT1E3 LTR MaLR -421 203 65 * 847 151 0 7 chr17 28907225 28907364 -60597189 - MLT2C1 LTR ERVL -259 138 1 260 263 105 11 chr17 28907364 28907459 -60597094 + MIR SINE MIR 143 246 -16 595 215 77 82 chr17 28907526 28907721 -60596832 - MIR SINE MIR -1 261 68 1988 134 0 28 chr17 28908569 28908705 -60595848 + AluJb SINE Alu 1 139 -173 2159 97 13 6 chr17 28908705 28909016 -60595537 + AluSq SINE Alu 1 313 0 1988 134 0 28 chr17 28909016 28909200 -60595353 + AluJb SINE Alu 139 312 0 1260 258 70 38 chr17 28910330 28910702 -60593851 + LTR16C LTR ERVL 73 456 -35 221 328 0 0 chr17 28910725 28910792 -60593761 + L2 LINE L2 2638 2704 -610 324 0 0 0 chr17 28910792 28910828 -60593725 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 833 134 0 0 chr17 28910839 28910958 -60593595 - FLAM_C SINE Alu -24 119 1 925 300 160 10 chr17 28910960 28911486 -60593067 + L2 LINE L2 2689 3313 0 581 361 91 12 chr17 28911483 28911912 -60592641 - L2 LINE L2 -698 2616 2154 * 499 323 112 36 chr17 28912147 28912503 -60592050 - L2 LINE L2 -1174 2140 1758 280 198 111 12 chr17 28912509 28912590 -60591963 + L1ME3 LINE L1 5620 5708 -454 2014 113 0 7 chr17 28912590 28912918 -60591635 - AluSx SINE Alu 0 328 3 1056 135 6 12 chr17 28912923 28913136 -60591417 - AluSg/x SINE Alu 0 335 124 546 168 0 107 chr17 28913150 28913269 -60591284 + L1ME3 LINE L1 6028 6129 -33 2217 104 0 0 chr17 28913269 28913566 -60590987 + AluSp SINE Alu 1 297 -16 546 168 0 107 chr17 28913566 28913595 -60590958 + L1ME3 LINE L1 6129 6160 -2 561 128 0 0 chr17 28913608 28913686 -60590867 + AluS SINE Alu 2 79 -233 2439 55 7 0 chr17 28913693 28914002 -60590551 - AluSp SINE Alu -2 311 1 1738 109 0 4 chr17 28914002 28914249 -60590304 + AluSg SINE Alu 64 310 0 1994 220 65 33 chr17 28914407 28914445 -60590108 + L1MC4 LINE L1 7288 7323 -719 1795 168 7 0 chr17 28914445 28914743 -60589810 - AluJo SINE Alu -12 300 1 1994 220 65 33 chr17 28914743 28914999 -60589554 + L1MC4 LINE L1 7323 7569 -473 2141 110 0 3 chr17 28914999 28915298 -60589255 + AluSg SINE Alu 1 298 -12 1994 220 65 33 chr17 28915298 28915575 -60588978 + L1MC4 LINE L1 7569 7878 -164 696 148 0 0 chr17 28915575 28915683 -60588870 - FLAM_A SINE Alu -15 127 20 656 168 64 69 chr17 28915685 28915858 -60588695 + L1MC4 LINE L1 7871 8042 0 1692 160 14 3 chr17 28915882 28916175 -60588378 + AluJb SINE Alu 3 298 -14 22 0 0 0 chr17 28916225 28916247 -60588306 + AT_rich Low_complexity Low_complexity 1 22 0 333 0 0 0 chr17 28916495 28916532 -60588021 + (CA)n Simple_repeat Simple_repeat 2 38 0 710 332 4 27 chr17 28916586 28916842 -60587711 + MIR SINE MIR 1 250 -12 378 259 53 38 chr17 28916965 28917096 -60587457 - MIR SINE MIR -57 205 73 1617 114 9 0 chr17 28917114 28917342 -60587211 - MER30 DNA MER1_type 0 230 1 1958 102 60 0 chr17 28917895 28918179 -60586374 - AluSg SINE Alu -7 303 3 257 50 0 25 chr17 28918554 28918594 -60585959 + (TTGG)n Simple_repeat Simple_repeat 2 40 0 286 324 49 0 chr17 28918663 28918765 -60585788 + MIR3 SINE MIR 85 191 -17 633 193 36 50 chr17 28919448 28919588 -60584965 - LTR67 LTR ERVL -2 555 418 1533 178 7 18 chr17 28920004 28920285 -60584268 - AluJo SINE Alu -34 278 1 223 244 51 77 chr17 28920330 28920345 -60584208 - MIR SINE MIR -149 113 99 2260 172 80 11 chr17 28920345 28920782 -60583771 + MLT1C LTR MaLR 1 467 0 223 244 51 77 chr17 28920782 28920844 -60583709 - MIR SINE MIR -163 99 38 502 301 96 4 chr17 28920954 28921193 -60583360 - L2 LINE L2 -925 2389 2129 956 238 128 63 chr17 28921194 28921514 -60583039 + MLT1J LTR MaLR 2 361 -150 2261 143 58 15 chr17 28921514 28921926 -60582627 - MSTB1 LTR MaLR 0 432 3 956 238 128 63 chr17 28921926 28922051 -60582502 + MLT1J LTR MaLR 361 476 -35 327 292 89 86 chr17 28922305 28922476 -60582077 + MLT1K LTR MaLR 194 363 -225 1296 186 47 99 chr17 28922476 28922858 -60581695 - MLT1A1 LTR MaLR -1 364 3 327 292 89 86 chr17 28922858 28922943 -60581610 + MLT1K LTR MaLR 363 446 -142 5563 67 12 0 chr17 28922943 28923626 -60580927 - LTR8 LTR ERV1 0 691 1 327 292 89 86 chr17 28923626 28923762 -60580791 + MLT1K LTR MaLR 446 588 0 374 326 181 26 chr17 28923764 28924024 -60580529 - L2 LINE L2 -1253 2061 1843 186 43 0 0 chr17 28924024 28924047 -60580506 + (GGAAA)n Simple_repeat Simple_repeat 1 23 0 374 326 181 26 chr17 28924047 28924709 -60579844 - L2 LINE L2 -1471 1843 996 2141 48 17 17 chr17 28925179 28925498 -60579055 + AluY SINE Alu 1 311 0 911 123 0 0 chr17 28925882 28926020 -60578533 - AluJo SINE Alu -39 273 136 4085 113 38 13 chr17 28926026 28926654 -60577899 + LTR9B LTR ERV1 1 644 0 1849 74 4 4 chr17 28927021 28927264 -60577289 - AluSp SINE Alu -70 243 1 374 239 0 11 chr17 28927358 28927446 -60577107 - MLT1K LTR MaLR 0 588 502 219 225 0 0 chr17 28927447 28927487 -60577066 - L2 LINE L2 -9 3304 3265 240 274 130 41 chr17 28927701 28927847 -60576706 - MLT1K LTR MaLR -323 265 107 1258 178 29 29 chr17 28927961 28928202 -60576351 + MIR SINE MIR 10 250 -12 201 39 0 0 chr17 28931036 28931062 -60573491 + (TG)n Simple_repeat Simple_repeat 2 27 0 1922 226 48 12 chr17 28931421 28931939 -60572614 + MLT1F LTR MaLR 1 533 -9 509 259 108 0 chr17 28931946 28932085 -60572468 - MIR SINE MIR 0 262 109 1390 220 86 48 chr17 28932103 28932498 -60572055 + LTR16A1 LTR ERVL 45 454 -3 245 263 145 0 chr17 28932506 28932526 -60572027 - MIR SINE MIR -158 104 88 1579 186 117 17 chr17 28932526 28932886 -60571667 + MSTD LTR MaLR 1 396 0 245 263 145 0 chr17 28932886 28932941 -60571612 - MIR SINE MIR -174 88 18 1523 130 8 42 chr17 28932971 28933233 -60571320 - AluJo SINE Alu -59 253 1 1742 211 23 46 chr17 28933501 28933936 -60570617 + MLT1C LTR MaLR 43 467 0 309 214 14 57 chr17 28934020 28934090 -60570463 - AluJo SINE Alu -141 161 95 288 77 0 0 chr17 28934128 28934167 -60570386 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 204 254 61 97 chr17 28934167 28934226 -60570327 - MIR SINE MIR -69 139 84 2157 132 15 26 chr17 28934226 28934567 -60569986 - MER1B DNA MER1_type 0 337 1 204 254 61 97 chr17 28934567 28934621 -60569932 - MIR SINE MIR -124 84 30 345 202 36 24 chr17 28935605 28935689 -60568864 + L2 LINE L2 3183 3267 -5 * 527 297 74 26 chr17 28935688 28935915 -60568638 + MIR SINE MIR 21 256 -6 3287 177 26 17 chr17 28936461 28937111 -60567442 + L1MB5 LINE L1 5519 6174 0 2264 43 30 27 chr17 28937192 28937492 -60567061 + AluY SINE Alu 1 301 -10 909 186 0 6 chr17 28937661 28937822 -60566731 - AluJb SINE Alu -20 292 133 2131 114 3 0 chr17 28937826 28938123 -60566430 - AluSx SINE Alu -12 300 3 318 287 69 0 chr17 28938127 28938228 -60566325 + MER5A DNA MER1_type 52 159 -30 203 227 0 23 chr17 28938661 28938705 -60565848 - MIR SINE MIR -3 259 217 * 205 231 0 0 chr17 28938674 28938713 -60565840 - L2 LINE L2 -21 3292 3254 1203 92 0 0 chr17 28938736 28938899 -60565654 - AluSc SINE Alu -5 304 142 256 254 263 34 chr17 28938915 28939033 -60565520 - MIR SINE MIR -98 164 20 1854 145 0 17 chr17 28939204 28939501 -60565052 + AluJb SINE Alu 1 292 -20 346 157 0 0 chr17 28939583 28939660 -60564893 + AluSp/q SINE Alu 235 311 0 309 222 89 33 chr17 28939779 28939869 -60564684 + MIR SINE MIR 2 96 -166 309 298 105 26 chr17 28940516 28940630 -60563923 - MIR SINE MIR -8 254 132 634 278 126 9 chr17 28940638 28940868 -60563685 - MIR SINE MIR -4 258 2 383 307 103 35 chr17 28941532 28941959 -60562594 - L2 LINE L2 -47 3266 2811 1623 148 14 24 chr17 28942146 28942436 -60562117 + AluJb SINE Alu 12 298 -14 263 359 13 0 chr17 28942876 28942954 -60561599 + MIR SINE MIR 50 128 -134 661 259 39 15 chr17 28942954 28943159 -60561394 - LTR16C LTR ERVL -9 482 273 755 201 41 24 chr17 28943162 28943331 -60561222 - MER5B DNA MER1_type -6 172 1 462 232 42 0 chr17 28943331 28943426 -60561127 - LTR16C LTR ERVL -208 283 185 227 306 216 0 chr17 28943567 28943678 -60560875 + MIR SINE MIR 125 259 -3 182 339 0 46 chr17 28943695 28943760 -60560793 + L2 LINE L2 3235 3296 -17 860 144 7 33 chr17 28943892 28944045 -60560508 - MER5B DNA MER1_type -6 172 24 223 354 31 10 chr17 28944346 28944442 -60560111 - L2 LINE L2 -6 3266 3169 2243 101 0 0 chr17 28944609 28944907 -60559646 - AluSg SINE Alu -12 298 1 757 244 120 22 chr17 28945021 28945246 -60559307 - MIR SINE MIR 0 262 16 349 285 70 51 chr17 29046210 29046368 -60458185 - L1ME4a LINE L1 -2 6119 5959 721 284 101 48 chr17 29046386 29046841 -60457712 - L1ME4a LINE L1 -205 5916 5438 216 0 0 0 chr17 29047009 29047033 -60457520 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 2223 71 14 0 chr17 29047037 29047317 -60457236 - AluSp SINE Alu -29 284 1 291 255 47 23 chr17 29047476 29047601 -60456952 + MIR3 SINE MIR 72 201 -7 1106 255 185 17 chr17 29047689 29048223 -60456330 - L2 LINE L2 -5 3308 2692 417 260 46 77 chr17 29048793 29048989 -60455564 + L2 LINE L2 3123 3312 -1 1983 141 0 6 chr17 29049271 29049583 -60454970 - AluJb SINE Alu 0 312 3 461 204 142 40 chr17 29049610 29049806 -60454747 - MIR SINE MIR -51 211 2 376 298 92 8 chr17 29049872 29050003 -60454550 + MIR SINE MIR 118 259 -3 180 176 0 0 chr17 29052292 29052326 -60452227 + CT-rich Low_complexity Low_complexity 2 35 0 1716 150 7 7 chr17 29052416 29052702 -60451851 - AluJb SINE Alu -26 286 1 447 282 96 35 chr17 29053119 29053158 -60451395 - MIR SINE MIR -43 219 184 1379 258 61 39 chr17 29053158 29053650 -60450903 - MLT1D LTR MaLR 0 505 3 447 282 96 35 chr17 29053650 29053814 -60450739 - MIR SINE MIR -78 184 10 194 298 106 11 chr17 29053931 29054025 -60450528 - L3b LINE CR1 -134 1449 1347 407 264 66 8 chr17 29054555 29054676 -60449877 - MIR SINE MIR -86 176 49 184 121 61 0 chr17 29054701 29054734 -60449819 + MIR SINE MIR 40 74 -134 181 286 43 0 chr17 29054735 29054805 -60449748 + MIR3 SINE MIR 117 189 -19 242 330 133 6 chr17 29055137 29055310 -60449243 - MIR SINE MIR -36 226 32 356 320 160 5 chr17 29055446 29055646 -60448907 - MIR SINE MIR -2 260 30 1807 168 0 3 chr17 29056240 29056537 -60448016 + AluJo SINE Alu 1 296 -16 198 244 0 0 chr17 29057540 29057581 -60446972 + MIR SINE MIR 62 102 -106 390 236 111 14 chr17 29058841 29058985 -60445568 + MIR SINE MIR 28 185 -77 463 200 296 0 chr17 29059056 29059181 -60445372 + MER5A DNA MER1_type 22 183 -6 1961 189 41 67 chr17 29060690 29061155 -60443398 + MER21B LTR ERV1 13 465 -398 628 126 0 0 chr17 29061174 29061261 -60443292 + AluJ/FLAM SINE Alu 1 87 -225 2792 137 2 28 chr17 29061295 29061762 -60442791 + LTR24 LTR ERV1 13 467 0 499 209 75 66 chr17 29061762 29062014 -60442539 + MER21B LTR ERV1 475 802 -61 375 302 88 54 chr17 29062043 29062394 -60442159 + L2 LINE L2 2498 2860 -454 302 364 67 47 chr17 29062412 29062709 -60441844 + L2 LINE L2 2970 3272 0 512 341 26 42 chr17 29062722 29062839 -60441714 + MIR SINE MIR 3 120 -142 1891 124 3 46 chr17 29062839 29063162 -60441391 - AluJb SINE Alu 0 312 4 512 341 26 42 chr17 29063162 29063308 -60441245 + MIR SINE MIR 120 262 0 326 105 53 0 chr17 29063309 29063366 -60441187 + MIR SINE MIR 124 183 -79 283 331 20 33 chr17 29063714 29063865 -60440688 - MIR3 SINE MIR -57 151 3 2122 107 0 31 chr17 29064016 29064335 -60440218 + AluSc SINE Alu 1 309 0 800 111 0 76 chr17 29064405 29064549 -60440004 + FLAM_C SINE Alu 1 133 0 189 0 0 0 chr17 29064703 29064724 -60439829 + (T)n Simple_repeat Simple_repeat 1 21 0 277 298 71 0 chr17 29064737 29064821 -60439732 - L2 LINE L2 -27 3286 3197 807 147 55 133 chr17 29065132 29065350 -60439203 + MER63A DNA MER1_type 1 201 -9 366 311 35 49 chr17 29065400 29065584 -60438969 + MIR SINE MIR 2 186 -22 210 328 127 8 chr17 29065586 29065720 -60438833 + L2 LINE L2 2915 3064 -208 4574 116 8 23 chr17 29065722 29066449 -60438104 + MER4E LTR ERV1 1 716 -50 1832 118 59 7 chr17 29066556 29066828 -60437725 - AluSx SINE Alu -26 286 1 187 337 145 0 chr17 29066968 29067051 -60437502 - L2 LINE L2 0 3272 3178 22 0 0 0 chr17 29067053 29067075 -60437478 + AT_rich Low_complexity Low_complexity 1 22 0 676 235 152 17 chr17 29067075 29067305 -60437248 - MIR SINE MIR 0 262 2 307 211 77 48 chr17 29067340 29067444 -60437109 - MIR SINE MIR -42 220 114 1743 79 0 4 chr17 29067444 29067673 -60436880 + AluY SINE Alu 84 311 0 237 236 0 0 chr17 29068489 29068544 -60436009 + L2 LINE L2 2244 2298 -1016 459 266 18 0 chr17 29068649 29068758 -60435795 - L2 LINE L2 -1 3312 3202 1909 136 33 0 chr17 29068909 29069210 -60435343 + AluSx SINE Alu 1 311 -1 265 300 40 10 chr17 29069226 29069326 -60435227 + L2 LINE L2 2662 2764 -550 1869 148 3 0 chr17 29069394 29069677 -60434876 + AluJb SINE Alu 2 285 -27 21 0 0 0 chr17 29069677 29069698 -60434855 + AT_rich Low_complexity Low_complexity 1 21 0 257 337 0 10 chr17 29069916 29070017 -60434536 + MIR SINE MIR 45 144 -64 258 138 75 138 chr17 29070024 29070104 -60434449 + L1ME2 LINE L1 6034 6108 -56 1756 147 0 51 chr17 29070108 29070420 -60434133 - AluJb SINE Alu -16 296 1 201 94 0 0 chr17 29071104 29071136 -60433417 + (CTGGGG)n Simple_repeat Simple_repeat 2 33 0 294 340 96 44 chr17 29072451 29072795 -60431758 + L2 LINE L2 2902 3263 -9 2151 120 0 0 chr17 29073040 29073340 -60431213 - AluSx SINE Alu -12 300 1 642 195 0 18 chr17 29073591 29073704 -60430849 + FLAM_A SINE Alu 11 121 -21 247 206 14 41 chr17 29073794 29073867 -60430686 - MIR SINE MIR -70 138 68 544 346 119 14 chr17 29073967 29074626 -60429927 + L2 LINE L2 2235 3106 -166 762 273 28 36 chr17 29075467 29075720 -60428833 + MIR SINE MIR 2 252 -10 522 302 126 34 chr17 29075809 29076167 -60428386 - L2 LINE L2 0 3272 2882 466 159 106 98 chr17 29076211 29076343 -60428210 + FLAM_C SINE Alu 1 133 0 201 74 0 0 chr17 29076360 29076387 -60428166 + (A)n Simple_repeat Simple_repeat 1 27 0 403 243 48 5 chr17 29076399 29076588 -60427965 + L1ME LINE L1 5255 5451 -908 224 290 194 21 chr17 29076588 29076774 -60427779 + L2 LINE L2 2959 3176 -137 2497 65 0 0 chr17 29076822 29077132 -60427421 + AluY SINE Alu 1 310 -1 245 323 20 20 chr17 29077346 29077445 -60427108 + L1ME LINE L1 5643 5741 -380 1283 141 13 22 chr17 29077561 29077813 -60426740 + AluJo SINE Alu 87 336 0 369 351 93 25 chr17 29078011 29078363 -60426190 - L2 LINE L2 -272 3000 2625 2162 110 0 0 chr17 29078434 29078726 -60425827 + AluSx SINE Alu 1 292 -20 1233 177 0 56 chr17 29078875 29079124 -60425429 - AluJo SINE Alu -77 235 1 512 254 15 15 chr17 29079127 29079261 -60425292 - MIR SINE MIR -113 149 16 2200 117 0 3 chr17 29079342 29079651 -60424902 + AluSx SINE Alu 1 308 -4 894 162 0 0 chr17 29079662 29079804 -60424749 + FLAM_C SINE Alu 1 142 -1 1890 130 9 48 chr17 29079839 29080155 -60424398 - AluSx SINE Alu -8 304 1 328 280 80 8 chr17 29080157 29080282 -60424271 - MIR SINE MIR -55 153 20 750 145 0 83 chr17 29080598 29080743 -60423810 - FLAM_C SINE Alu -10 133 1 2144 94 10 3 chr17 29080817 29081116 -60423437 - AluSx SINE Alu -11 301 1 1843 151 20 0 chr17 29081433 29081731 -60422822 - AluJb SINE Alu -2 310 7 1273 108 187 42 chr17 29081881 29082122 -60422431 - AluSx SINE Alu -16 296 21 2082 85 3 50 chr17 29082128 29082446 -60422107 - AluSx SINE Alu -8 304 2 256 264 0 29 chr17 29083716 29083786 -60420767 + MIR SINE MIR 75 143 -67 25 31 0 0 chr17 29084124 29084156 -60420397 + GC_rich Low_complexity Low_complexity 1 32 0 256 255 85 0 chr17 29085168 29085262 -60419291 - MIR SINE MIR -77 185 84 201 250 54 0 chr17 29085450 29085506 -60419047 - MIR SINE MIR -57 151 93 300 305 51 0 chr17 29085787 29085905 -60418648 - MIR SINE MIR -48 214 91 213 288 45 0 chr17 29088222 29088288 -60416265 + MIR SINE MIR 35 103 -159 646 173 0 0 chr17 29089757 29089861 -60414692 + FRAM SINE Alu 66 169 -7 1545 178 4 22 chr17 29089877 29090153 -60414400 + AluJo SINE Alu 3 273 -39 2112 113 0 16 chr17 29090166 29090476 -60414077 + AluSg SINE Alu 1 305 -5 276 281 245 10 chr17 29093215 29093407 -60411146 + MIR SINE MIR 20 256 -6 1693 157 7 33 chr17 29093613 29093912 -60410641 - AluJb SINE Alu -21 291 1 896 150 0 0 chr17 29093916 29094049 -60410504 - AluSq/x SINE Alu -179 133 1 1962 114 37 7 chr17 29096169 29096468 -60408085 + AluSx SINE Alu 1 308 -4 1967 107 3 21 chr17 29096489 29096804 -60407749 - AluSq SINE Alu 0 310 1 463 299 98 11 chr17 29097938 29098112 -60406441 - MIR3 SINE MIR -18 190 2 205 316 82 41 chr17 29099985 29100181 -60404372 - L2 LINE L2 -13 3300 3097 2029 115 3 0 chr17 29100770 29101099 -60403454 - AluSp SINE Alu 0 330 1 408 327 215 8 chr17 29101431 29101691 -60402862 - L2 LINE L2 -1 3271 2958 1410 105 0 5 chr17 29102887 29103087 -60401466 - AluSc SINE Alu -13 296 98 2437 86 0 3 chr17 29103586 29103887 -60400666 + AluSx SINE Alu 1 300 -12 2170 135 0 3 chr17 29103890 29104194 -60400359 + AluSc SINE Alu 3 305 -4 385 229 118 41 chr17 29104285 29104418 -60400135 - MIR SINE MIR -69 139 3 202 242 97 0 chr17 29105192 29105254 -60399299 - L2 LINE L2 -65 3248 3181 515 267 56 28 chr17 29106116 29106296 -60398257 - MIR SINE MIR -77 185 1 376 329 100 0 chr17 29106532 29106702 -60397851 + MIR SINE MIR 2 188 -74 1009 146 61 85 chr17 29106787 29106999 -60397554 - AluJo SINE Alu -20 292 86 2201 86 10 33 chr17 29107695 29107996 -60396557 - AluSp SINE Alu -11 302 9 349 321 124 0 chr17 29112306 29112499 -60392054 + MIR SINE MIR 22 238 -24 268 304 0 64 chr17 29112659 29112784 -60391769 + MIR SINE MIR 113 229 -33 23 0 0 0 chr17 29113251 29113274 -60391279 + AT_rich Low_complexity Low_complexity 1 23 0 1105 164 0 0 chr17 29113312 29113483 -60391070 - AluJb SINE Alu -92 220 50 509 300 7 20 chr17 29113599 29113749 -60390804 - MIR SINE MIR -108 154 7 1939 170 0 3 chr17 29115380 29115692 -60388861 + AluJb SINE Alu 1 311 -1 2113 140 0 22 chr17 29117161 29117476 -60387077 - AluJb SINE Alu -4 308 1 656 173 9 0 chr17 29118160 29118270 -60386283 + FLAM_A SINE Alu 6 116 -26 703 231 214 26 chr17 29118431 29118739 -60385814 - L2 LINE L2 -19 3294 2929 1340 171 5 0 chr17 29118757 29118967 -60385586 + AluJo SINE Alu 1 211 -101 676 265 105 58 chr17 29119024 29119367 -60385186 - L2 LINE L2 -406 2908 2550 223 274 9 104 chr17 29119438 29119544 -60385009 + L2 LINE L2 3172 3267 -5 255 269 93 74 chr17 29121475 29121691 -60382862 + L2 LINE L2 2365 2584 -730 533 183 19 29 chr17 29121718 29121822 -60382731 - L2 LINE L2 -2 3270 3168 376 321 129 42 chr17 29121818 29122341 -60382212 + L2 LINE L2 2647 3221 -92 * 1932 163 0 0 chr17 29122476 29122770 -60381783 - AluJb SINE Alu -12 300 7 315 0 0 0 chr17 29123317 29123352 -60381201 + (TG)n Simple_repeat Simple_repeat 2 36 0 271 340 35 17 chr17 29123474 29123678 -60380875 + L2 LINE L2 2765 3010 -262 548 238 56 14 chr17 29124012 29124155 -60380398 + L2 LINE L2 3122 3270 -2 252 206 215 28 chr17 29125123 29125230 -60379323 + MIR SINE MIR 17 143 -65 942 156 52 0 chr17 29125614 29125768 -60378785 - FAM SINE Alu -13 162 1 226 284 57 23 chr17 29126152 29126169 -60378384 - MIR SINE MIR -55 207 192 2140 133 0 19 chr17 29126169 29126340 -60378213 - AluSx SINE Alu -10 302 138 2495 69 10 0 chr17 29126340 29126645 -60377908 - AluSp SINE Alu -5 308 1 2140 133 0 19 chr17 29126645 29126781 -60377772 - AluSx SINE Alu -174 138 1 226 284 57 23 chr17 29126781 29126851 -60377702 - MIR SINE MIR -70 192 117 1795 141 20 46 chr17 29129154 29129460 -60375093 + AluJb SINE Alu 1 298 -14 237 245 41 0 chr17 29131241 29131290 -60373263 + L2 LINE L2 3222 3272 0 410 224 0 12 chr17 29132263 29132348 -60372205 + MIR3 SINE MIR 94 177 -31 1715 150 56 11 chr17 29132413 29132699 -60371854 - AluJb SINE Alu -13 299 1 2073 80 117 0 chr17 29132726 29133000 -60371553 + AluSx SINE Alu 1 306 -6 476 289 99 7 chr17 29133316 29133468 -60371085 + MIR SINE MIR 86 251 -11 2156 114 23 7 chr17 29133881 29134189 -60370364 + AluSq SINE Alu 1 313 0 417 20 0 0 chr17 29134574 29134624 -60369929 + (CA)n Simple_repeat Simple_repeat 1 50 0 1626 163 50 4 chr17 29134699 29134976 -60369577 + AluJo SINE Alu 2 291 -21 1981 161 130 24 chr17 29135358 29135811 -60368742 + MLT1D LTR MaLR 1 501 -4 1018 158 43 0 chr17 29137669 29137833 -60366720 + AluJo SINE Alu 2 172 -140 1362 137 136 30 chr17 29139917 29140012 -60364541 + Tigger7 DNA MER2_type 228 311 -2276 1723 130 60 0 chr17 29140012 29140281 -60364272 + AluJo SINE Alu 1 285 -27 1362 137 136 30 chr17 29140281 29140631 -60363922 + Tigger7 DNA MER2_type 311 2579 -8 1892 153 28 0 chr17 29140691 29140979 -60363574 + AluSx SINE Alu 1 296 -16 2228 123 3 3 chr17 29140979 29141280 -60363273 + AluSx SINE Alu 1 301 -11 551 190 146 7 chr17 29141290 29141427 -60363126 - MIR3 SINE MIR -23 185 30 1016 158 148 6 chr17 29141816 29141999 -60362554 + AluJo SINE Alu 85 293 -19 323 377 20 7 chr17 29142853 29142999 -60361554 + MIR3 SINE MIR 54 201 -7 463 273 15 0 chr17 29143236 29143368 -60361185 + L1MC1 LINE L1 5071 5204 -942 * 2842 166 22 20 chr17 29143362 29143918 -60360635 + L1MC1 LINE L1 5572 6128 -205 361 134 0 15 chr17 29143962 29144029 -60360524 + L1MC1 LINE L1 6264 6329 -4 612 149 79 0 chr17 29144546 29144660 -60359893 + FLAM_A SINE Alu 20 142 0 810 199 7 14 chr17 29144865 29145011 -60359542 + AluJb SINE Alu 119 263 -49 1843 56 0 0 chr17 29145035 29145248 -60359305 - AluY SINE Alu -13 298 86 897 227 44 31 chr17 29145297 29145618 -60358935 - L1M4 LINE L1 -1000 5146 4822 1436 177 57 32 chr17 29146047 29146176 -60358377 + AluJo SINE Alu 1 125 -187 1795 142 33 30 chr17 29146176 29146478 -60358075 + AluSx SINE Alu 1 303 -9 1436 177 57 32 chr17 29146478 29146631 -60357922 + AluJo SINE Alu 125 290 -22 1422 158 37 64 chr17 29146687 29146984 -60357569 - AluJo SINE Alu -18 294 6 21 0 0 0 chr17 29147266 29147287 -60357266 + AT_rich Low_complexity Low_complexity 1 21 0 208 135 0 0 chr17 29147339 29147376 -60357177 + (T)n Simple_repeat Simple_repeat 1 37 0 289 138 46 0 chr17 29147479 29147544 -60357009 - L1MB4 LINE L1 -1 6179 6112 577 143 29 9 chr17 29147560 29147665 -60356888 + FLAM_A SINE Alu 20 126 -16 419 134 12 49 chr17 29147665 29147747 -60356806 - L1MB3 LINE L1 -59 6124 6046 228 359 43 22 chr17 29147782 29147874 -60356679 - L2 LINE L2 -39 3233 3140 24 53 0 0 chr17 29147927 29147965 -60356588 + AT_rich Low_complexity Low_complexity 1 38 0 307 24 0 0 chr17 29148130 29148172 -60356381 - L1PA6 LINE L1 -2 6152 6111 376 127 0 16 chr17 29148643 29148706 -60355847 - LTR12 LTR ERV1 -631 83 22 4843 119 27 5 chr17 29148768 29149557 -60354996 + MER109 Unknown Unknown 1599 2404 -28 1984 152 0 3 chr17 29149705 29150001 -60354552 - AluJb SINE Alu -17 295 1 212 130 0 43 chr17 29150095 29150141 -60354412 + (CAAAAA)n Simple_repeat Simple_repeat 2 45 0 2062 144 10 0 chr17 29150724 29151029 -60353524 + AluSx SINE Alu 1 308 -4 2139 132 0 7 chr17 29151250 29151546 -60353007 + AluSq SINE Alu 1 294 -19 28 61 0 0 chr17 29151549 29151598 -60352955 + AT_rich Low_complexity Low_complexity 1 49 0 1978 109 47 4 chr17 29152083 29152393 -60352160 - AluSx SINE Alu 0 324 3 27 0 0 0 chr17 29153231 29153258 -60351295 + AT_rich Low_complexity Low_complexity 1 27 0 944 125 0 21 chr17 29153522 29153666 -60350887 - AluSg/x SINE Alu -2 310 170 387 0 0 0 chr17 29153952 29153995 -60350558 + (TG)n Simple_repeat Simple_repeat 2 44 0 2163 110 0 10 chr17 29153996 29154287 -60350266 - AluSx SINE Alu -24 288 1 26 0 0 0 chr17 29154348 29154374 -60350179 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr17 29154427 29154457 -60350096 + AT_rich Low_complexity Low_complexity 1 30 0 631 114 9 44 chr17 29154487 29154601 -60349952 + AluJb SINE Alu 202 311 -1 2143 105 0 16 chr17 29154690 29155003 -60349550 + AluSg SINE Alu 1 308 -2 1470 118 141 15 chr17 29155015 29155285 -60349268 + AluSx SINE Alu 1 304 -8 2066 60 52 0 chr17 29156181 29156469 -60348084 - AluY SINE Alu 0 302 1 1933 101 42 3 chr17 29156787 29157073 -60347480 + AluSx SINE Alu 1 297 -15 192 77 0 0 chr17 29157526 29157552 -60347001 + (TA)n Simple_repeat Simple_repeat 2 27 0 1660 169 3 0 chr17 29157634 29157918 -60346635 + AluJb SINE Alu 14 298 -14 872 118 0 0 chr17 29158647 29158797 -60345756 - AluSg/x SINE Alu 0 308 159 316 273 61 50 chr17 29158807 29158906 -60345647 + L1MC4 LINE L1 6610 6709 -1333 2000 112 10 3 chr17 29159105 29159400 -60345153 - AluSx SINE Alu -15 297 1 23 0 0 0 chr17 29160065 29160088 -60344465 + AT_rich Low_complexity Low_complexity 1 23 0 813 141 0 52 chr17 29160751 29160886 -60343667 + FLAM_C SINE Alu 4 131 -12 2091 97 4 0 chr17 29161194 29161497 -60343056 - AluSg SINE Alu 0 304 1 1562 153 32 51 chr17 29161957 29162271 -60342282 + AluJb SINE Alu 1 308 -4 1789 130 13 23 chr17 29162478 29162778 -60341775 + AluJo SINE Alu 1 297 -15 557 97 11 21 chr17 29162790 29162883 -60341670 - L1MB2 LINE L1 -18 6153 6062 2127 122 0 3 chr17 29163198 29163509 -60341044 - AluSg SINE Alu 0 310 1 196 286 119 43 chr17 29164767 29164952 -60339601 + MIR SINE MIR 48 246 -16 283 212 88 88 chr17 29165223 29165360 -60339193 + L1 LINE L1 4910 5046 -1100 936 73 81 0 chr17 29165451 29165575 -60338978 - MER85 DNA T2_type -5 134 1 1574 169 17 27 chr17 29165590 29165886 -60338667 + AluJo SINE Alu 1 293 -19 2175 105 0 7 chr17 29166081 29166385 -60338168 - AluSx SINE Alu -10 302 1 256 325 48 8 chr17 29166467 29166593 -60337960 + L1MC/D LINE L1 5496 5626 -2182 1567 171 17 10 chr17 29166593 29166885 -60337668 - AluJo SINE Alu -16 296 3 2188 92 3 0 chr17 29166898 29167193 -60337360 - AluSg SINE Alu -14 296 1 21 57 0 0 chr17 29167418 29167453 -60337100 + AT_rich Low_complexity Low_complexity 1 35 0 2821 3 0 0 chr17 29167684 29167995 -60336558 + AluYa5 SINE Alu 1 311 0 502 200 110 0 chr17 29168232 29168332 -60336221 - FLAM_C SINE Alu -12 131 21 1445 181 10 30 chr17 29168436 29168734 -60335819 + AluJo SINE Alu 1 292 -20 23 0 0 0 chr17 29168805 29168828 -60335725 + AT_rich Low_complexity Low_complexity 1 23 0 2084 122 3 3 chr17 29168889 29169200 -60335353 - AluSq SINE Alu -2 311 1 776 179 0 8 chr17 29169824 29169958 -60334595 + AluJo SINE Alu 2 134 -178 1191 234 66 0 chr17 29170138 29170411 -60334142 + AluJo SINE Alu 10 300 -12 2298 93 0 3 chr17 29170674 29170984 -60333569 - AluSq SINE Alu -4 309 1 2147 100 10 3 chr17 29171044 29171344 -60333209 + AluSg SINE Alu 1 302 -8 1456 184 0 17 chr17 29171353 29171641 -60332912 + AluJb SINE Alu 1 283 -29 324 0 0 0 chr17 29171641 29171677 -60332876 + (CA)n Simple_repeat Simple_repeat 2 37 0 428 324 109 24 chr17 29171728 29171938 -60332615 - MIR SINE MIR -11 251 24 1567 167 14 44 chr17 29172053 29172370 -60332183 + AluJb SINE Alu 1 308 0 434 252 214 44 chr17 29172751 29172957 -60331596 - MIR SINE MIR -13 249 9 240 290 84 84 chr17 29173434 29173477 -60331076 - L2 LINE L2 -8 3305 3263 1462 131 161 0 chr17 29173477 29173737 -60330816 + AluSg SINE Alu 1 302 -8 240 290 84 84 chr17 29173737 29173907 -60330646 - L2 LINE L2 -49 3264 3092 1936 95 56 0 chr17 29173932 29174217 -60330336 + AluSp SINE Alu 1 301 -12 248 263 51 102 chr17 29175042 29175102 -60329451 - MER5B DNA MER1_type -62 116 63 1898 143 0 0 chr17 29175102 29175389 -60329164 + AluSx SINE Alu 1 287 -25 248 263 51 102 chr17 29175389 29175446 -60329107 - MER5B DNA MER1_type -115 63 5 435 330 32 9 chr17 29175596 29175785 -60328768 - MIR3 SINE MIR -51 211 14 2269 109 0 0 chr17 29176057 29176369 -60328184 - AluSq SINE Alu 0 313 2 1983 135 3 6 chr17 29176426 29176737 -60327816 - AluSx SINE Alu -2 310 1 2181 71 4 4 chr17 29177239 29177557 -60326996 - AluY SINE Alu 0 318 1 369 225 198 16 chr17 29177557 29177753 -60326800 - L1ME LINE L1 -561 5560 5321 261 0 0 0 chr17 29177754 29177783 -60326770 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 265 249 74 98 chr17 29177819 29178024 -60326529 - L1ME LINE L1 -853 5293 5096 2157 121 0 0 chr17 29178024 29178331 -60326222 - AluSx SINE Alu -5 307 1 265 249 74 98 chr17 29178331 29178422 -60326131 - L1ME LINE L1 -1050 5096 5004 2090 125 0 3 chr17 29178512 29178809 -60325744 - AluSg SINE Alu -14 296 1 180 0 0 0 chr17 29178824 29178844 -60325709 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 192 77 0 0 chr17 29180440 29180466 -60324087 + (A)n Simple_repeat Simple_repeat 1 26 0 2161 113 0 0 chr17 29182638 29182947 -60321606 - AluSx SINE Alu -3 309 1 4458 77 44 9 chr17 29183400 29184036 -60320517 - MER4E LTR ERV1 -108 658 1 4049 109 74 21 chr17 29191627 29192354 -60312199 + MER4A-int LTR ERV1 5831 6596 -2 526 111 89 0 chr17 29192362 29192452 -60312101 + MER4A LTR ERV1 1 98 -566 1430 154 16 94 chr17 29192505 29192823 -60311730 + MER4A LTR ERV1 372 664 0 26 30 0 0 chr17 29193336 29193369 -60311184 + AT_rich Low_complexity Low_complexity 1 33 0 1995 110 7 27 chr17 29193475 29193622 -60310931 + AluSq SINE Alu 1 140 -173 6404 129 20 31 chr17 29193622 29194705 -60309848 - MER11C LTR ERVK 0 1071 1 1995 110 7 27 chr17 29194705 29194856 -60309697 + AluSq SINE Alu 140 293 -20 966 189 17 6 chr17 29194933 29195113 -60309440 - Tigger3(Golem) DNA MER2_type 0 3029 2848 3450 82 24 9 chr17 29195114 29195567 -60308986 - LTR46 LTR ERV1 0 460 1 3317 123 22 36 chr17 29195567 29195692 -60308861 - LTR46-int LTR ERV1 0 6985 6860 1967 103 58 3 chr17 29195692 29195983 -60308570 - AluSq SINE Alu -2 311 5 3317 123 22 36 chr17 29195983 29196408 -60308145 - LTR46-int LTR ERV1 -125 6860 6443 364 193 2 30 chr17 29196408 29196486 -60308067 - AluJb SINE Alu -137 165 104 2061 116 0 0 chr17 29196617 29196934 -60307619 + AluSx SINE Alu 1 317 0 2795 53 14 8 chr17 29196934 29197289 -60307264 + L1PA8 LINE L1 5805 6161 -11 337 275 0 0 chr17 29198044 29198124 -60306429 + MLT1I LTR MaLR 98 177 -232 1823 160 0 0 chr17 29198151 29198444 -60306109 - AluJb SINE Alu -19 293 1 322 256 256 0 chr17 29198825 29198958 -60305595 - MIR SINE MIR -71 191 25 262 133 67 0 chr17 29199051 29199111 -60305442 + CT-rich Low_complexity Low_complexity 1 64 0 352 357 18 29 chr17 29199345 29199516 -60305037 + MER5A DNA MER1_type 7 186 -3 199 140 5 0 chr17 29199589 29199622 -60304931 + MIR SINE MIR 116 155 -53 193 125 21 21 chr17 29200502 29200550 -60304003 + CT-rich Low_complexity Low_complexity 1 48 0 285 287 61 17 chr17 29200567 29200682 -60303871 - L2 LINE L2 -15 3257 3138 1659 170 0 34 chr17 29201781 29201959 -60302594 - AluJb SINE Alu 0 312 148 2266 82 3 0 chr17 29201959 29202251 -60302302 - AluSp SINE Alu -20 293 1 1659 170 0 34 chr17 29202251 29202395 -60302158 - AluJb SINE Alu -164 148 1 453 292 47 37 chr17 29202495 29202709 -60301844 - MIR SINE MIR -16 246 18 845 260 45 81 chr17 29203835 29204030 -60300523 - L2 LINE L2 -2 3311 3110 1806 168 7 0 chr17 29204030 29204378 -60300175 + AluJo SINE Alu 1 350 0 845 260 45 81 chr17 29204378 29204392 -60300161 - L2 LINE L2 -203 3110 3097 698 125 0 76 chr17 29204392 29204536 -60300017 - FLAM_C SINE Alu 0 133 1 845 260 45 81 chr17 29204536 29204668 -60299885 - L2 LINE L2 -216 3097 2945 2929 13 0 0 chr17 29205219 29205529 -60299024 + AluYb8 SINE Alu 1 310 -8 1910 160 7 3 chr17 29206820 29207114 -60297439 + AluJo SINE Alu 1 295 -17 277 192 0 82 chr17 29207607 29207680 -60296873 - L3 LINE CR1 -116 1461 1395 252 100 0 0 chr17 29208672 29208712 -60295841 + (CTGGGG)n Simple_repeat Simple_repeat 1 40 0 344 203 28 126 chr17 29210497 29210640 -60293913 - MIR SINE MIR -118 144 16 293 313 12 0 chr17 29210678 29210761 -60293792 - MIR3 SINE MIR -51 157 74 449 273 0 41 chr17 29211042 29211163 -60293390 + MIR SINE MIR 30 145 -63 2294 103 10 3 chr17 29211240 29211540 -60293013 - AluSx SINE Alu -10 302 1 2029 130 10 51 chr17 29212097 29212139 -60292414 - THE1C LTR MaLR 0 375 333 2127 114 41 0 chr17 29212139 29212429 -60292124 + AluSx SINE Alu 1 302 -10 2029 130 10 51 chr17 29212429 29212777 -60291776 - THE1C LTR MaLR -42 333 1 1448 154 8 0 chr17 29212821 29213068 -60291485 + MER41B LTR ERV1 1 249 -386 963 94 31 0 chr17 29213073 29213200 -60291353 - AluSq/x SINE Alu -179 133 3 1760 147 3 14 chr17 29213201 29213472 -60291081 + MER41B LTR ERV1 237 506 -129 2246 129 3 0 chr17 29213472 29213781 -60290772 - AluSp SINE Alu -3 310 1 1760 147 3 14 chr17 29213781 29213802 -60290751 + MER41B LTR ERV1 506 526 -109 561 147 164 0 chr17 29213803 29213919 -60290634 - FLAM_C SINE Alu -7 136 2 724 142 8 0 chr17 29213925 29214045 -60290508 + MER41A LTR ERV1 433 553 -1 1246 163 163 19 chr17 29214515 29214772 -60289781 - AluJb SINE Alu -18 294 1 2307 109 0 13 chr17 29214779 29215090 -60289463 - AluSx SINE Alu -5 307 1 332 256 46 51 chr17 29215213 29215402 -60289151 - MIR3 SINE MIR -58 150 9 230 336 58 0 chr17 29216127 29216231 -60288322 + MIR3 SINE MIR 60 169 -39 27 0 0 0 chr17 29216361 29216388 -60288165 + AT_rich Low_complexity Low_complexity 1 27 0 301 277 90 2 chr17 29216412 29216538 -60288015 + MLT1J2 LTR MaLR 53 227 -284 616 182 52 57 chr17 29216542 29216719 -60287834 + MLT1H1 LTR MaLR 1 170 -420 1311 182 63 82 chr17 29216719 29217098 -60287455 + MLT1B LTR MaLR 1 372 -18 1657 224 39 32 chr17 29217187 29217593 -60286960 + LTR2 LTR ERV1 41 449 0 61703 57 3 5 chr17 29217593 29225422 -60279131 + HERVE LTR ERV1 1 7812 -1 1684 219 39 34 chr17 29225511 29225918 -60278635 + LTR2 LTR ERV1 41 449 0 708 254 134 53 chr17 29225943 29226302 -60278251 + MLT1H1 LTR MaLR 168 555 0 372 287 112 43 chr17 29226302 29226560 -60277993 + MLT1J LTR MaLR 227 502 -9 33 43 0 0 chr17 29226637 29226684 -60277869 + AT_rich Low_complexity Low_complexity 1 47 0 347 221 148 27 chr17 29227025 29227174 -60277379 - L2 LINE L2 -180 3092 2926 204 268 73 12 chr17 29229248 29229330 -60275223 + MIR SINE MIR 63 149 -113 227 232 195 0 chr17 29230595 29230677 -60273876 - MIR SINE MIR -83 179 82 217 295 26 13 chr17 29231054 29231132 -60273421 - L3b LINE CR1 -95 1488 1410 6722 66 5 61 chr17 29231134 29232145 -60272408 - SVA Other Other 0 1386 433 5594 76 28 56 chr17 29232162 29233332 -60271221 - SVA Other Other -518 868 57 504 45 0 0 chr17 29233332 29233399 -60271154 + (GGGAGA)n Simple_repeat Simple_repeat 1 67 0 231 114 0 0 chr17 29233427 29233462 -60271091 + MLT1B LTR MaLR 465 499 -6 762 218 43 21 chr17 29234976 29235126 -60269427 - L2 LINE L2 -6 3307 3151 2375 116 0 0 chr17 29235126 29235437 -60269116 + AluSx SINE Alu 1 311 -1 762 218 43 21 chr17 29235437 29235474 -60269079 - L2 LINE L2 -162 3151 3116 418 211 0 0 chr17 29235477 29235553 -60269000 + AluJ/FLAM SINE Alu 1 76 -236 873 204 35 81 chr17 29235759 29236043 -60268510 - MER58B DNA MER1_type 0 341 71 404 208 0 0 chr17 29236054 29236126 -60268427 - AluJ/FLAM SINE Alu -239 73 2 2182 122 7 0 chr17 29236136 29236432 -60268121 - AluSx SINE Alu -14 298 1 288 176 235 0 chr17 29236434 29236502 -60268051 - MER58B DNA MER1_type -257 84 1 21 0 0 0 chr17 29236616 29236637 -60267916 + AT_rich Low_complexity Low_complexity 1 21 0 2368 109 3 0 chr17 29237119 29237431 -60267122 - AluSp SINE Alu 0 313 1 414 280 85 44 chr17 29237849 29238059 -60266494 - MLT1J LTR MaLR -2 509 282 2397 104 0 0 chr17 29238059 29238367 -60266186 + AluSg SINE Alu 1 308 -2 414 280 85 44 chr17 29238367 29238449 -60266104 - MLT1J LTR MaLR -229 282 205 1685 162 0 7 chr17 29238591 29238862 -60265691 + AluSg SINE Alu 41 309 -1 1696 195 3 7 chr17 29238969 29239266 -60265287 + AluJb SINE Alu 13 308 -4 1113 111 0 12 chr17 29239270 29239442 -60265111 + L1PA11 LINE L1 6005 6174 0 2443 104 0 0 chr17 29239450 29239757 -60264796 + AluSg SINE Alu 3 309 -1 305 257 14 0 chr17 29239774 29239848 -60264705 - MLT1J LTR MaLR -315 196 122 994 250 48 0 chr17 29240062 29240290 -60264263 + MLT1J LTR MaLR 2 240 -271 1242 126 48 0 chr17 29240348 29240579 -60263974 - L1MA9 LINE L1 -1 6311 6070 251 258 34 45 chr17 29240670 29240759 -60263794 + LTR16C LTR ERVL 156 243 -248 971 138 0 14 chr17 29241276 29241421 -60263132 + FLAM_C SINE Alu 1 143 0 968 193 12 0 chr17 29241450 29241621 -60262932 + AluJb SINE Alu 120 292 -20 354 200 0 0 chr17 29241686 29241746 -60262807 - AluJo SINE Alu -123 179 120 849 37 0 0 chr17 29241772 29241880 -60262673 - L1PA6 LINE L1 -5 6149 6042 21204 119 16 20 chr17 29241880 29245350 -60259203 - L1P LINE L1 -2682 3464 11 2106 119 7 3 chr17 29245358 29245652 -60258901 - AluSq SINE Alu -16 297 3 707 217 7 0 chr17 29245658 29245796 -60258757 - FLAM_C SINE Alu -3 140 2 681 293 111 13 chr17 29245800 29246189 -60258364 + HAL1b LINE L1 415 841 -507 323 240 27 0 chr17 29246448 29246523 -60258030 + L1MC5 LINE L1 6633 6709 -1252 287 100 0 0 chr17 29246547 29246597 -60257956 - L1MA9 LINE L1 0 6312 6263 2054 132 7 3 chr17 29246598 29246887 -60257666 + AluSx SINE Alu 1 290 -22 54 0 0 0 chr17 29246909 29246963 -60257590 + AT_rich Low_complexity Low_complexity 1 54 0 1897 141 31 75 chr17 29246964 29247441 -60257112 - L1MA9 LINE L1 -43 6269 5814 566 234 105 63 chr17 29247444 29247669 -60256884 + L1MC4 LINE L1 6762 7014 -996 1044 198 113 46 chr17 29247669 29247952 -60256601 + AluJo SINE Alu 1 302 0 566 234 105 63 chr17 29247952 29247965 -60256588 + L1MC4 LINE L1 7014 7025 -985 2015 159 0 7 chr17 29247968 29248270 -60256283 + AluSx SINE Alu 1 300 -12 853 215 66 29 chr17 29248316 29248558 -60255995 + L1MC5 LINE L1 7268 7518 -443 280 242 0 0 chr17 29248579 29248641 -60255912 + GA-rich Low_complexity Low_complexity 2 63 0 2345 112 0 0 chr17 29248664 29248959 -60255594 + AluSx SINE Alu 1 295 -17 242 214 103 60 chr17 29249092 29249209 -60255344 + L1ME3A LINE L1 5988 6109 -61 336 243 14 0 chr17 29249301 29249375 -60255178 + MLT1J LTR MaLR 122 196 -315 2159 117 11 0 chr17 29249505 29249786 -60254767 - AluSx SINE Alu -24 288 5 914 205 56 8 chr17 29249861 29250095 -60254458 - L1MA9 LINE L1 -38 6274 6030 773 206 0 40 chr17 29250082 29250281 -60254272 + L1MA9 LINE L1 5846 6036 -276 * 201 329 125 29 chr17 29250376 29250616 -60253937 + L2 LINE L2 2079 2341 -973 444 260 87 7 chr17 29250633 29250783 -60253770 - MIR SINE MIR 0 262 101 188 379 0 0 chr17 29250834 29250900 -60253653 + L2 LINE L2 2398 2463 -851 929 233 18 9 chr17 29251137 29251365 -60253188 + L2 LINE L2 3084 3313 0 217 294 0 0 chr17 29251397 29251448 -60253105 + (CA)n Simple_repeat Simple_repeat 2 52 0 591 224 133 0 chr17 29251654 29251819 -60252734 + MIR SINE MIR 12 198 -64 2346 115 0 0 chr17 29252080 29252385 -60252168 + AluSx SINE Alu 1 305 -7 495 184 39 0 chr17 29252612 29252715 -60251838 + FLAM_C SINE Alu 2 108 -35 363 44 0 0 chr17 29252715 29252760 -60251793 + (TG)n Simple_repeat Simple_repeat 2 46 0 943 168 5 30 chr17 29252923 29252935 -60251618 + L1M4 LINE L1 3561 3572 -2574 2413 97 7 3 chr17 29252935 29253244 -60251309 + AluSg SINE Alu 1 310 0 943 168 5 30 chr17 29253244 29253428 -60251125 + L1M4 LINE L1 3572 3752 -2394 419 138 0 0 chr17 29253430 29253495 -60251058 + AluJ/FLAM SINE Alu 2 66 -246 292 130 0 0 chr17 29253495 29253541 -60251012 + AluS SINE Alu 40 85 -218 1475 174 20 20 chr17 29253541 29253788 -60250765 - AluJo SINE Alu -50 262 16 610 226 26 66 chr17 29253814 29253881 -60250672 - L1M4 LINE L1 -2191 3955 3887 2228 126 0 0 chr17 29253881 29254183 -60250370 - AluSx SINE Alu -10 302 1 610 226 26 66 chr17 29254183 29254341 -60250212 - L1M4 LINE L1 -2259 3887 3739 951 154 32 0 chr17 29254345 29254501 -60250052 - AluSg/x SINE Alu 0 312 152 1865 159 0 10 chr17 29254535 29254830 -60249723 + AluJb SINE Alu 1 292 -20 438 246 0 0 chr17 29254857 29254967 -60249586 + L1M4 LINE L1 4787 4896 -1250 21 0 0 0 chr17 29255104 29255125 -60249428 + AT_rich Low_complexity Low_complexity 1 21 0 2274 96 7 0 chr17 29255136 29255427 -60249126 + AluSx SINE Alu 1 293 -19 278 256 0 13 chr17 29255444 29255522 -60249031 - L1ME1 LINE L1 -23 6143 6067 * 1507 191 25 3 chr17 29255517 29255884 -60248669 + L1M4 LINE L1 4905 5279 -867 2246 125 0 0 chr17 29256223 29256534 -60248019 - AluSx SINE Alu -1 311 1 462 167 0 39 chr17 29256534 29256612 -60247941 - FRAM/FAM SINE Alu -109 67 1 399 203 0 0 chr17 29256612 29256686 -60247867 - L1M3 LINE L1 -589 5594 5521 618 203 74 42 chr17 29256686 29256903 -60247650 - Charlie2a DNA MER1_type -1143 1719 1496 535 309 18 6 chr17 29256936 29257101 -60247452 - Charlie2b DNA MER1_type -2094 688 522 478 243 142 94 chr17 29257109 29257293 -60247260 - Charlie2b DNA MER1_type -2538 324 150 2118 108 17 3 chr17 29257293 29257580 -60246973 + AluSx SINE Alu 1 291 -21 478 243 142 94 chr17 29257580 29257618 -60246935 - Charlie2b DNA MER1_type -2712 150 115 889 187 7 0 chr17 29257618 29257768 -60246785 + FRAM SINE Alu 1 151 -15 478 243 142 94 chr17 29257768 29257853 -60246700 - Charlie2b DNA MER1_type -2747 115 1 24 32 0 0 chr17 29258133 29258164 -60246389 + AT_rich Low_complexity Low_complexity 1 31 0 2292 122 0 0 chr17 29258427 29258731 -60245822 - AluSx SINE Alu -8 304 1 24 67 0 0 chr17 29260346 29260391 -60244162 + AT_rich Low_complexity Low_complexity 1 45 0 31 26 0 0 chr17 29260567 29260605 -60243948 + AT_rich Low_complexity Low_complexity 1 38 0 309 26 0 0 chr17 29260896 29260934 -60243619 + (TG)n Simple_repeat Simple_repeat 1 38 0 468 254 170 0 chr17 29261561 29261726 -60242827 + MIR SINE MIR 68 260 -2 385 245 50 70 chr17 29262289 29262489 -60242064 + LTR41 LTR ERVL 23 218 -555 308 286 11 58 chr17 29262667 29262856 -60241697 + LTR41 LTR ERVL 587 766 -7 2390 93 3 0 chr17 29263231 29263531 -60241022 - AluSp SINE Alu -12 301 1 474 202 211 0 chr17 29265469 29265578 -60238975 - AluJo SINE Alu -178 134 3 3186 149 54 7 chr17 29266315 29266892 -60237661 - Tigger4(Zombi) DNA MER2_type -2079 652 49 366 74 0 0 chr17 29266905 29266959 -60237594 + (TG)n Simple_repeat Simple_repeat 2 55 0 1741 124 47 16 chr17 29267161 29267418 -60237135 + AluSg SINE Alu 12 276 -34 1478 158 37 60 chr17 29267691 29267989 -60236564 - AluJo SINE Alu -17 295 5 2296 81 7 0 chr17 29268318 29268601 -60235952 + AluSg SINE Alu 1 285 -25 255 31 0 0 chr17 29268602 29268634 -60235919 + (CAAAC)n Simple_repeat Simple_repeat 4 35 0 2132 103 56 44 chr17 29269089 29269449 -60235104 + THE1B LTR MaLR 1 364 0 210 189 57 0 chr17 29269458 29269511 -60235042 + A-rich Low_complexity Low_complexity 2 57 0 1766 160 39 0 chr17 29270080 29270362 -60234191 + AluJb SINE Alu 1 293 -19 22 0 0 0 chr17 29270620 29270642 -60233911 + AT_rich Low_complexity Low_complexity 1 22 0 2009 117 4 4 chr17 29270928 29271248 -60233305 - AluSx SINE Alu 0 324 5 587 174 87 14 chr17 29271366 29271504 -60233049 - LTR29 LTR ERV1 -68 554 407 1733 192 17 0 chr17 29272289 29272580 -60231973 + AluJb SINE Alu 1 296 -16 628 153 119 17 chr17 29272725 29272843 -60231710 - FLAM_A SINE Alu -3 130 1 203 0 37 0 chr17 29273631 29273658 -60230895 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 340 321 151 6 chr17 29273726 29273885 -60230668 + MIR3 SINE MIR 15 196 -12 1820 142 16 23 chr17 29273889 29274192 -60230361 - AluJb SINE Alu -11 301 1 1957 145 0 49 chr17 29274320 29274495 -60230058 - AluJo SINE Alu -3 309 156 2002 109 7 20 chr17 29274495 29274797 -60229756 - AluSx SINE Alu -10 302 5 1957 145 0 49 chr17 29274797 29274945 -60229608 - AluJo SINE Alu -156 156 2 303 270 174 26 chr17 29275290 29275405 -60229148 + MIR3 SINE MIR 10 141 -67 216 0 0 0 chr17 29276020 29276044 -60228509 + (A)n Simple_repeat Simple_repeat 1 24 0 1299 189 77 45 chr17 29276074 29276190 -60228363 + AluJo SINE Alu 3 114 -198 2103 108 0 11 chr17 29276190 29276469 -60228084 - AluSx SINE Alu -36 276 1 1299 189 77 45 chr17 29276469 29276485 -60228068 + AluJo SINE Alu 114 128 -184 275 0 0 28 chr17 29276485 29276521 -60228032 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 1299 189 77 45 chr17 29276521 29276673 -60227880 + AluJo SINE Alu 128 297 -15 199 204 61 41 chr17 29277157 29277206 -60227347 + MIR3 SINE MIR 127 176 -32 506 296 18 18 chr17 29277537 29277706 -60226847 + MLT1K LTR MaLR 70 238 -350 431 234 90 102 chr17 29277792 29278202 -60226351 + MLT1L LTR MaLR 99 503 -8 908 220 91 32 chr17 29278218 29278527 -60226026 + MLT1K LTR MaLR 258 584 -4 1364 74 165 35 chr17 29278637 29278957 -60225596 + Tigger2 DNA MER2_type 1 2579 -139 204 235 0 0 chr17 29279070 29279121 -60225432 + (TA)n Simple_repeat Simple_repeat 2 52 0 24 0 0 0 chr17 29279195 29279219 -60225334 + AT_rich Low_complexity Low_complexity 1 24 0 539 282 159 9 chr17 29279294 29279514 -60225039 + MIR SINE MIR 9 261 -1 447 195 17 103 chr17 29279938 29280112 -60224441 - L1M4 LINE L1 -2211 3935 3777 852 240 27 27 chr17 29280153 29280374 -60224179 - MIR SINE MIR -2 260 40 2343 50 10 30 chr17 29280451 29280753 -60223800 - AluY SINE Alu -15 296 1 23 54 0 0 chr17 29280895 29280932 -60223621 + AT_rich Low_complexity Low_complexity 1 37 0 218 105 81 47 chr17 29283877 29283963 -60220590 + (CTATT)n Simple_repeat Simple_repeat 2 90 0 652 273 197 25 chr17 29285565 29286101 -60218452 + L2 LINE L2 2677 3306 -7 547 267 93 61 chr17 29286078 29286325 -60218228 - MIR SINE MIR -2 260 6 * 2290 97 0 0 chr17 29286730 29287019 -60217534 + AluSq SINE Alu 1 289 -24 25 31 0 0 chr17 29287019 29287051 -60217502 + AT_rich Low_complexity Low_complexity 1 32 0 2291 91 0 36 chr17 29287564 29287873 -60216680 - AluSx SINE Alu -14 298 1 1453 146 100 43 chr17 29288069 29288349 -60216204 - AluJo SINE Alu -16 296 1 326 116 0 101 chr17 29288475 29288544 -60216009 + AluJ/FRAM SINE Alu 230 291 -11 265 326 0 11 chr17 29288860 29288952 -60215601 - L2 LINE L2 0 3313 3223 23 24 0 24 chr17 29289550 29289565 -60214988 + AT_rich Low_complexity Low_complexity 1 15 -25 1961 130 14 0 chr17 29289565 29289849 -60214704 - AluSx SINE Alu -24 288 1 23 24 0 24 chr17 29289849 29289874 -60214679 + AT_rich Low_complexity Low_complexity 15 40 0 196 308 13 13 chr17 29290514 29290592 -60213961 + L3b LINE CR1 1316 1393 -190 26 0 0 0 chr17 29290593 29290619 -60213934 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr17 29290920 29290950 -60213603 + AT_rich Low_complexity Low_complexity 1 30 0 2021 166 0 0 chr17 29291395 29291696 -60212857 - AluJo SINE Alu -11 301 1 864 200 0 0 chr17 29292668 29292818 -60211735 - AluJb SINE Alu -30 282 133 2095 127 0 13 chr17 29292936 29293236 -60211317 - AluSx SINE Alu -16 296 1 2367 83 0 0 chr17 29293272 29293562 -60210991 + AluY SINE Alu 1 290 -21 947 249 222 11 chr17 29295335 29295768 -60208785 + L2 LINE L2 2066 2589 -725 21 36 0 0 chr17 29295849 29295877 -60208676 + AT_rich Low_complexity Low_complexity 1 28 0 640 252 208 8 chr17 29296258 29296573 -60207980 + L2 LINE L2 2687 3061 -252 365 246 27 45 chr17 29296580 29296690 -60207863 + Tigger3(Golem) DNA MER2_type 1 108 -2921 328 125 125 0 chr17 29296690 29296762 -60207791 + Tigger3(Golem) DNA MER2_type 2284 2364 -665 948 185 85 16 chr17 29296767 29296956 -60207597 + AluJb SINE Alu 107 308 -4 3126 94 29 22 chr17 29296956 29297466 -60207087 + Tigger3(Golem) DNA MER2_type 2428 2941 -88 442 232 119 31 chr17 29297497 29297691 -60206862 + L2 LINE L2 3103 3313 0 430 320 76 12 chr17 29297680 29297852 -60206701 - MIR SINE MIR -6 256 74 * 1769 146 0 60 chr17 29297960 29298096 -60206457 + AluJb SINE Alu 1 144 -168 2201 120 3 0 chr17 29298096 29298388 -60206165 + AluSx SINE Alu 1 293 -19 1769 146 0 60 chr17 29298388 29298566 -60205987 + AluJb SINE Alu 144 296 -16 333 170 134 54 chr17 29298608 29298720 -60205833 + L1MC5 LINE L1 7114 7234 -727 248 200 31 15 chr17 29299070 29299135 -60205418 + L1MC5 LINE L1 7509 7574 -387 450 182 42 28 chr17 29299161 29299304 -60205249 + L1MC5 LINE L1 7639 7783 -178 5318 54 16 3 chr17 29299656 29300339 -60204214 - L1PA6 LINE L1 -6 6148 5457 305 285 41 24 chr17 29300441 29300525 -60204028 - L1ME LINE L1 -303 5818 5730 1989 148 6 16 chr17 29300525 29300836 -60203717 - AluSx SINE Alu -4 308 1 305 285 41 24 chr17 29300836 29300874 -60203679 - L1ME LINE L1 -391 5730 5694 274 266 92 28 chr17 29301120 29301229 -60203324 - HAL1 LINE L1 -1784 723 608 640 292 20 5 chr17 29301270 29301465 -60203088 - HAL1 LINE L1 -2108 399 202 1489 190 112 9 chr17 29301952 29302283 -60202270 + MLT1A1 LTR MaLR 1 365 0 235 95 0 0 chr17 29302298 29302340 -60202213 - Alu SINE Alu -5 298 257 276 213 163 38 chr17 29302558 29302638 -60201915 - L2 LINE L2 -1 3312 3223 1911 131 0 31 chr17 29303650 29303970 -60200583 + AluSx SINE Alu 1 311 0 981 156 85 75 chr17 29304442 29304654 -60199899 + AluJb SINE Alu 87 300 -12 1818 169 0 0 chr17 29304663 29304953 -60199600 + AluJb SINE Alu 1 290 -22 231 106 21 21 chr17 29305423 29305470 -60199083 - Alu SINE Alu -2 131 85 1288 188 33 0 chr17 29305470 29305683 -60198870 - AluJo SINE Alu -92 220 1 4277 161 83 7 chr17 29305794 29306956 -60197597 + L1MB2 LINE L1 4910 6145 -26 277 222 16 0 chr17 29307143 29307206 -60197347 - MIR SINE MIR -27 235 172 429 174 73 28 chr17 29307397 29307506 -60197047 + L1MC2 LINE L1 6226 6339 -5 2435 104 8 6 chr17 29308324 29308678 -60195875 + THE1A LTR MaLR 1 355 0 258 105 0 0 chr17 29308753 29308791 -60195762 + (A)n Simple_repeat Simple_repeat 1 38 0 2130 159 6 8 chr17 29309298 29309649 -60194904 + MLT1A1 LTR MaLR 1 350 -15 412 178 230 0 chr17 29310757 29310892 -60193661 - MER104 DNA Tc2 0 180 15 24 0 0 0 chr17 29311428 29311452 -60193101 + AT_rich Low_complexity Low_complexity 1 24 0 679 71 81 0 chr17 29311503 29311602 -60192951 - L1PA11 LINE L1 -2 6172 6066 185 244 24 0 chr17 29311912 29311953 -60192600 - L2 LINE L2 -8 3264 3223 382 276 138 79 chr17 29312302 29312781 -60191772 + L1MEd LINE L1 58 564 -5555 501 274 150 70 chr17 29312801 29313247 -60191306 + L1MEd LINE L1 610 1091 -5028 1404 177 0 8 chr17 29313293 29313536 -60191017 + AluJb SINE Alu 70 310 -2 303 263 74 47 chr17 29313544 29313734 -60190819 + L1MEd LINE L1 2116 2310 -3819 281 295 95 29 chr17 29313738 29313820 -60190733 + L1MCc LINE L1 21 96 -6327 201 94 0 0 chr17 29313820 29313852 -60190701 + (TTGG)n Simple_repeat Simple_repeat 1 32 0 281 295 95 29 chr17 29313852 29314010 -60190543 + L1MCc LINE L1 96 277 -6146 1266 233 36 96 chr17 29314212 29314657 -60189896 + L1M4 LINE L1 4339 4738 -1408 1161 164 42 19 chr17 29314657 29314870 -60189683 + MER20 DNA MER1_type 2 219 0 1266 233 36 96 chr17 29314870 29315042 -60189511 + L1M4 LINE L1 4738 4919 -1227 33 66 0 0 chr17 29315082 29315143 -60189410 + AT_rich Low_complexity Low_complexity 1 61 0 2361 81 7 0 chr17 29315201 29315497 -60189056 + AluSc SINE Alu 1 298 -11 430 254 53 9 chr17 29317375 29317489 -60187064 - MIR3 SINE MIR -81 127 9 327 227 248 7 chr17 29317639 29317780 -60186773 - MIR SINE MIR -7 255 81 381 314 72 26 chr17 29318008 29318161 -60186392 - L2 LINE L2 -1 3271 3112 1775 152 14 17 chr17 29318515 29318805 -60185748 + AluJo SINE Alu 1 289 -23 413 216 23 0 chr17 29318837 29318925 -60185628 - MIR SINE MIR 0 262 173 201 161 274 0 chr17 29319156 29319218 -60185335 - MIR SINE MIR -13 249 171 210 265 0 0 chr17 29319549 29319598 -60184955 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 199 329 27 0 chr17 29319704 29319777 -60184776 - L2 LINE L2 -1023 2291 2217 363 301 114 16 chr17 29320881 29321074 -60183479 - MIR SINE MIR -3 259 48 616 270 122 5 chr17 29321246 29321435 -60183118 + MIR SINE MIR 29 239 -23 381 75 0 0 chr17 29321453 29321506 -60183047 + (CAT)n Simple_repeat Simple_repeat 2 54 0 622 264 42 56 chr17 29321546 29321762 -60182791 - MIR SINE MIR -30 232 20 2124 109 10 3 chr17 29321873 29322166 -60182387 + AluSx SINE Alu 1 295 -17 2120 128 0 3 chr17 29324537 29324835 -60179718 + AluSc SINE Alu 1 297 -12 794 122 58 0 chr17 29327431 29327570 -60176983 - L1MB4 LINE L1 -6 6174 6028 230 355 16 16 chr17 29327580 29327704 -60176849 + L2 LINE L2 2698 2821 -493 207 356 20 0 chr17 29327792 29327893 -60176660 + L2 LINE L2 2949 3051 -221 563 240 43 33 chr17 29328049 29328223 -60176330 + MIR SINE MIR 2 175 -33 23 0 0 0 chr17 29328232 29328255 -60176298 + AT_rich Low_complexity Low_complexity 1 23 0 210 253 67 53 chr17 29328263 29328338 -60176215 + L2 LINE L2 3195 3270 -2 2051 108 24 20 chr17 29328607 29328904 -60175649 - AluSx SINE Alu -14 298 1 429 268 31 0 chr17 29329002 29329099 -60175454 - L2 LINE L2 0 3313 3214 390 254 53 0 chr17 29329418 29329532 -60175021 + MER94 DNA DNA 15 134 0 32 26 0 0 chr17 29329924 29329963 -60174590 + AT_rich Low_complexity Low_complexity 1 39 0 180 0 0 0 chr17 29330907 29330927 -60173626 + (T)n Simple_repeat Simple_repeat 1 20 0 2011 125 7 13 chr17 29330973 29331276 -60173277 + AluSq SINE Alu 1 301 -12 1760 132 27 108 chr17 29332223 29332593 -60171960 + MER77 LTR ERV1 1 340 -265 627 115 0 0 chr17 29332568 29332655 -60171898 + MER77 LTR ERV1 519 605 0 * 415 212 62 2 chr17 29333052 29333192 -60171361 - MER77 LTR ERV1 -424 181 1 1225 188 0 0 chr17 29333243 29333445 -60171108 + MER2 DNA MER2_type 1 202 -143 1834 129 0 29 chr17 29333484 29333763 -60170790 - AluJb SINE Alu -37 275 5 33 25 0 0 chr17 29333770 29333810 -60170743 + AT_rich Low_complexity Low_complexity 1 40 0 916 271 36 0 chr17 29334479 29334726 -60169827 + MIR SINE MIR 6 261 -1 359 183 42 0 chr17 29334907 29334978 -60169575 + MIR SINE MIR 116 189 -73 331 301 150 31 chr17 29335597 29335790 -60168763 - L2 LINE L2 0 3313 3098 252 0 0 0 chr17 29336263 29336291 -60168262 + (T)n Simple_repeat Simple_repeat 1 28 0 456 230 204 43 chr17 29336298 29336694 -60167859 - L1MC5 LINE L1 -50 7911 7452 22 35 0 0 chr17 29336742 29336771 -60167782 + AT_rich Low_complexity Low_complexity 1 29 0 2642 249 61 14 chr17 29338311 29338416 -60166137 - L1ME3 LINE L1 -30 6132 6033 2197 100 0 3 chr17 29338416 29338705 -60165848 - AluSg SINE Alu -22 288 1 2642 249 61 14 chr17 29338705 29339367 -60165186 - L1ME3 LINE L1 -129 6033 5329 1551 229 41 81 chr17 29339543 29340271 -60164282 - L1ME3 LINE L1 -932 5214 4516 284 302 22 50 chr17 29341512 29341651 -60162902 + MER5A DNA MER1_type 44 178 -11 501 298 116 10 chr17 29341842 29342040 -60162513 + MIR SINE MIR 18 236 -26 337 316 71 51 chr17 29342376 29342572 -60161981 - MIR SINE MIR -44 218 19 1903 156 10 0 chr17 29342808 29343110 -60161443 - AluJb SINE Alu -7 305 1 1490 195 24 24 chr17 29343343 29343635 -60160918 - AluJo SINE Alu -20 292 1 252 125 75 0 chr17 29344781 29344821 -60159732 - MER5B DNA MER1_type -134 44 2 654 246 129 11 chr17 29345771 29346051 -60158502 + LTR50 LTR ERVL 483 795 0 2292 101 13 0 chr17 29346079 29346387 -60158166 + AluSx SINE Alu 1 312 0 506 291 70 67 chr17 29346529 29346661 -60157892 - L3 LINE CR1 -758 819 689 715 191 0 22 chr17 29346661 29346797 -60157756 + FLAM_C SINE Alu 1 133 0 506 291 70 67 chr17 29346797 29346949 -60157604 - L3 LINE CR1 -888 689 534 237 234 47 16 chr17 29347075 29347139 -60157414 - L3 LINE CR1 -1260 317 252 758 137 81 0 chr17 29347257 29347381 -60157172 - FRAM SINE Alu -23 153 20 770 134 0 8 chr17 29347469 29347588 -60156965 + FLAM_C SINE Alu 1 118 -15 429 20 0 0 chr17 29347592 29347642 -60156911 + (CA)n Simple_repeat Simple_repeat 2 51 0 1919 179 139 16 chr17 29347826 29348272 -60156281 - L1MC4 LINE L1 -386 7656 7156 29 0 0 0 chr17 29351710 29351739 -60152814 + AT_rich Low_complexity Low_complexity 1 29 0 435 253 84 40 chr17 29351765 29351995 -60152558 + L1MC5 LINE L1 7694 8042 0 444 248 208 41 chr17 29351999 29352418 -60152135 + L1ME3 LINE L1 4358 4846 -1300 1629 178 196 6 chr17 29352471 29353067 -60151486 + LTR50 LTR ERVL 1 795 0 859 302 39 13 chr17 29353070 29353454 -60151099 + L1ME3 LINE L1 4899 5292 -854 1533 239 31 37 chr17 29353459 29353948 -60150605 + L1ME3 LINE L1 5477 5962 -208 3757 88 132 0 chr17 29354051 29354598 -60149955 + MER41B LTR ERV1 1 619 -16 243 304 54 0 chr17 29354598 29354710 -60149843 + L1ME3 LINE L1 6011 6128 -34 758 11 11 0 chr17 29355868 29355959 -60148594 + (CA)n Simple_repeat Simple_repeat 2 93 0 1146 222 59 77 chr17 29356083 29356349 -60148204 + L1ME2 LINE L1 875 1144 -5502 580 101 157 0 chr17 29356349 29356641 -60147912 + AluSx SINE Alu 4 309 0 1146 222 59 77 chr17 29356641 29356728 -60147825 + L1ME2 LINE L1 1144 1231 -5415 2305 19 0 0 chr17 29356728 29356988 -60147565 + AluYa5 SINE Alu 52 311 0 1146 222 59 77 chr17 29356988 29357593 -60146960 + L1ME2 LINE L1 1231 1938 -4708 1011 211 26 4 chr17 29357595 29357860 -60146693 + L1ME2 LINE L1 4832 5102 -1542 * 1906 241 99 7 chr17 29357857 29358442 -60146111 + L1ME2 LINE L1 6015 6653 -9 2390 72 0 10 chr17 29358629 29358934 -60145619 - AluY SINE Alu -9 302 1 1906 140 36 0 chr17 29359612 29359891 -60144662 - AluSx SINE Alu -21 291 3 187 243 40 68 chr17 29359983 29360057 -60144496 + L2 LINE L2 3197 3268 -45 268 230 52 91 chr17 29360087 29360285 -60144268 - L1M4 LINE L1 -2256 3890 3700 2464 75 3 3 chr17 29360385 29360693 -60143860 - AluSq SINE Alu -5 308 1 2259 91 7 3 chr17 29363291 29363588 -60140965 + AluSg SINE Alu 1 298 -12 28 0 0 0 chr17 29364720 29364748 -60139805 + AT_rich Low_complexity Low_complexity 1 28 0 195 369 121 27 chr17 29364898 29365047 -60139506 - L2 LINE L2 0 3272 3110 2265 104 0 3 chr17 29365179 29365476 -60139077 - AluSc SINE Alu -13 296 1 1058 244 52 35 chr17 29365591 29366023 -60138530 + L1ME1 LINE L1 2560 2956 -3688 1532 199 42 127 chr17 29366065 29367967 -60136586 + L1ME1 LINE L1 4654 6326 -338 2868 7 0 0 chr17 29367967 29368276 -60136277 + AluYb8 SINE Alu 1 309 -9 1532 199 42 127 chr17 29368276 29368587 -60135966 + L1ME1 LINE L1 6326 6662 -2 514 251 52 58 chr17 29368692 29368863 -60135690 + L1ME LINE L1 5528 5698 -423 2361 91 3 0 chr17 29368863 29369172 -60135381 + AluSp SINE Alu 1 310 -3 514 251 52 58 chr17 29369172 29369291 -60135262 + L1ME LINE L1 5698 5816 -305 225 216 0 0 chr17 29369940 29369977 -60134576 + MIR SINE MIR 113 149 -59 336 268 0 52 chr17 29374280 29374377 -60130176 - MIR SINE MIR -109 153 62 202 329 14 27 chr17 29374405 29374478 -60130075 - MIR3 SINE MIR -133 75 4 21 0 0 0 chr17 29374570 29374591 -60129962 + AT_rich Low_complexity Low_complexity 1 21 0 2047 103 14 0 chr17 29374962 29375307 -60129246 + AluSc SINE Alu 1 349 0 219 170 0 0 chr17 29376546 29376593 -60127960 + (TA)n Simple_repeat Simple_repeat 2 48 0 300 234 45 45 chr17 29376832 29376943 -60127610 - L1ME3A LINE L1 -222 5948 5838 234 226 36 36 chr17 29376979 29377063 -60127490 - L1ME3A LINE L1 -310 5860 5777 * 666 283 50 14 chr17 29377050 29377333 -60127220 + L1ME1 LINE L1 1335 1627 -4769 565 110 31 118 chr17 29377345 29377472 -60127081 - FLAM_C SINE Alu -20 123 8 1551 202 81 53 chr17 29377478 29377972 -60126581 + L1ME1 LINE L1 1615 2122 -4274 2567 224 70 32 chr17 29377988 29378947 -60125606 + L1ME1 LINE L1 5197 6196 -39 1818 183 118 103 chr17 29379141 29380053 -60124500 + L1MC5 LINE L1 6558 7498 -463 196 339 16 0 chr17 29380213 29380275 -60124278 - MIR3 SINE MIR -2 206 144 749 149 50 0 chr17 29380979 29381100 -60123453 - FLAM_C SINE Alu -6 127 1 32 0 0 0 chr17 29381207 29381239 -60123314 + AT_rich Low_complexity Low_complexity 1 32 0 466 316 38 38 chr17 29381368 29381605 -60122948 + MLT1J LTR MaLR 4 240 -271 1374 176 13 93 chr17 29381800 29382092 -60122461 - MER7A DNA MER2_type -2695 343 88 2147 120 0 3 chr17 29382092 29382393 -60122160 - AluSx SINE Alu -12 300 1 1374 176 13 93 chr17 29382393 29382475 -60122078 - MER7A DNA MER2_type -2950 88 1 2369 91 0 0 chr17 29382989 29383286 -60121267 + AluSg SINE Alu 1 297 -13 238 289 12 48 chr17 29383378 29383461 -60121092 + MIR SINE MIR 30 109 -99 508 313 69 13 chr17 29383536 29383769 -60120784 - MIR SINE MIR -9 253 8 668 89 0 0 chr17 29384445 29384535 -60120018 + AluSc SINE Alu 209 298 -11 2896 206 68 36 chr17 29384557 29384639 -60119914 + L1ME2 LINE L1 5006 5084 -1080 2123 138 0 0 chr17 29384639 29384937 -60119616 - AluSx SINE Alu -14 298 1 2896 206 68 36 chr17 29384937 29385890 -60118663 + L1ME2 LINE L1 5084 6073 -91 1874 172 7 0 chr17 29385913 29386209 -60118344 + AluJo SINE Alu 1 298 -14 265 282 55 0 chr17 29386245 29386355 -60118198 + L1ME1 LINE L1 2713 2828 -3387 464 129 75 0 chr17 29386469 29386562 -60117991 + HY1 scRNA scRNA 7 106 -6 241 167 21 0 chr17 29386574 29386622 -60117931 + L1ME1 LINE L1 2927 2975 -3240 * 514 183 17 17 chr17 29386616 29386731 -60117822 + L1ME1 LINE L1 4893 5007 -1208 2284 104 0 0 chr17 29386731 29387030 -60117523 - AluSx SINE Alu -11 301 3 180 0 0 0 chr17 29387033 29387053 -60117500 + (TA)n Simple_repeat Simple_repeat 2 21 0 615 175 26 0 chr17 29387073 29387187 -60117366 + Ricksha DNA DNA 3 119 -1927 1763 127 55 33 chr17 29387213 29387574 -60116979 + Ricksha DNA DNA 2348 2716 -530 2204 213 70 19 chr17 29387588 29388445 -60116108 + L1ME1 LINE L1 5013 5910 -325 236 314 184 54 chr17 29388452 29389082 -60115471 - L2 LINE L2 -1370 1944 1233 196 182 0 0 chr17 29389097 29389130 -60115423 - MER5C DNA MER1_type -200 124 92 494 322 128 13 chr17 29389205 29389626 -60114927 + L2 LINE L2 2582 3055 -217 817 310 43 0 chr17 29389948 29390180 -60114373 - MIR SINE MIR -3 259 18 740 197 0 0 chr17 29390194 29390316 -60114237 + FLAM_A SINE Alu 1 122 -11 1056 209 17 51 chr17 29390443 29390678 -60113875 + AluJo SINE Alu 3 229 -83 225 0 0 0 chr17 29390691 29390716 -60113837 + (A)n Simple_repeat Simple_repeat 1 25 0 292 289 62 10 chr17 29390760 29390857 -60113696 - L3 LINE CR1 -835 742 641 1776 171 23 3 chr17 29391660 29391959 -60112594 + AluJo SINE Alu 2 306 -6 2127 120 7 0 chr17 29392010 29392302 -60112251 + AluSx SINE Alu 1 294 -18 1012 103 0 27 chr17 29392955 29393139 -60111414 + (TA)n Simple_repeat Simple_repeat 2 180 0 685 113 57 0 chr17 29393745 29393851 -60110702 + FRAM SINE Alu 37 148 -28 275 298 11 0 chr17 29393903 29393997 -60110556 - L1ME LINE L1 -352 5769 5675 344 223 85 23 chr17 29394189 29394319 -60110234 - L1ME LINE L1 -770 5408 5271 850 147 0 29 chr17 29394319 29394455 -60110098 + AluJb SINE Alu 1 132 -180 1802 205 69 5 chr17 29394788 29395193 -60109360 - MER63B DNA MER1_type -5 431 1 26 0 0 0 chr17 29395638 29395664 -60108889 + AT_rich Low_complexity Low_complexity 1 26 0 1959 157 0 0 chr17 29395748 29396047 -60108506 - AluJb SINE Alu -13 299 1 712 191 22 77 chr17 29396103 29396286 -60108267 - FAM SINE Alu -2 173 1 2564 65 0 0 chr17 29397636 29397943 -60106610 + AluSp SINE Alu 1 307 -6 548 290 0 0 chr17 29398481 29398605 -60105948 + MIR3 SINE MIR 62 185 -23 585 252 85 27 chr17 29398661 29398919 -60105634 + L1ME4a LINE L1 5841 6113 -8 240 188 29 43 chr17 29399177 29399246 -60105307 - MIR SINE MIR -21 241 174 1157 189 9 44 chr17 29399246 29399474 -60105079 + AluJo SINE Alu 1 220 -92 2319 102 0 0 chr17 29399502 29399805 -60104748 + AluSc SINE Alu 3 305 -4 443 262 63 24 chr17 29399805 29399931 -60104622 - MIR SINE MIR -79 183 53 721 210 114 30 chr17 29399940 29400107 -60104446 - AluJo SINE Alu -131 181 1 250 319 115 9 chr17 29401702 29401815 -60102738 + MLT1K LTR MaLR 122 246 -342 992 145 0 7 chr17 29401815 29401967 -60102586 + AluJo SINE Alu 1 151 -161 1340 176 55 3 chr17 29402028 29402317 -60102236 + MER33 DNA MER1_type 21 324 0 28 0 0 0 chr17 29402615 29402643 -60101910 + AT_rich Low_complexity Low_complexity 1 28 0 466 265 20 0 chr17 29403084 29403186 -60101367 - MIR SINE MIR -66 142 39 2319 78 3 0 chr17 29403234 29403527 -60101026 + AluSc SINE Alu 1 294 -15 279 0 0 0 chr17 29403582 29403613 -60100940 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr17 29403631 29403652 -60100901 + AT_rich Low_complexity Low_complexity 1 21 0 1544 142 116 25 chr17 29403793 29404068 -60100485 - AluJb SINE Alu -12 300 1 619 215 49 0 chr17 29404337 29404481 -60100072 - MER106B DNA MER1_type -7 1052 902 244 309 204 73 chr17 29404574 29404888 -60099665 + L2 LINE L2 2918 3272 0 2036 122 11 0 chr17 29404904 29405190 -60099363 - AluSq SINE Alu -24 289 1 183 315 72 27 chr17 29405302 29405413 -60099140 + L2 LINE L2 3149 3264 -8 850 188 74 0 chr17 29407683 29407859 -60096694 - MIR SINE MIR 0 262 74 842 120 60 0 chr17 29409388 29409521 -60095032 + MLT1B LTR MaLR 204 344 -46 315 265 39 20 chr17 29409566 29409668 -60094885 - L2 LINE L2 -40 3273 3170 28 0 0 0 chr17 29409875 29409903 -60094650 + AT_rich Low_complexity Low_complexity 1 28 0 212 175 0 0 chr17 29411604 29411644 -60092909 + (CTG)n Simple_repeat Simple_repeat 1 40 0 204 40 0 0 chr17 29411749 29411774 -60092779 + (TGG)n Simple_repeat Simple_repeat 2 26 0 189 214 0 0 chr17 29412044 29412086 -60092467 + A-rich Low_complexity Low_complexity 1 42 0 245 323 0 0 chr17 29412962 29413061 -60091492 + C-rich Low_complexity Low_complexity 5 103 0 * 288 253 0 0 chr17 29412990 29413077 -60091476 + (CCG)n Simple_repeat Simple_repeat 1 87 0 241 279 0 0 chr17 29413393 29413454 -60091099 + T-rich Low_complexity Low_complexity 1 61 0 1621 167 16 23 chr17 29414113 29414419 -60090134 - AluJo SINE Alu -8 304 1 204 227 15 61 chr17 29414573 29414639 -60089914 + L2 LINE L2 2444 2506 -808 1442 120 18 5 chr17 29414649 29414866 -60089687 - AluJb SINE Alu -7 305 86 1368 173 65 0 chr17 29415043 29415320 -60089233 + AluJb SINE Alu 1 295 -17 351 319 158 34 chr17 29415333 29415754 -60088799 + L2 LINE L2 2794 3272 0 508 279 151 0 chr17 29415761 29415933 -60088620 + MIR SINE MIR 49 246 -16 544 246 43 22 chr17 29416020 29416158 -60088395 + MER5A DNA MER1_type 47 187 -2 185 298 96 43 chr17 29416171 29416265 -60088288 + L2 LINE L2 3215 3313 0 253 250 18 0 chr17 29416304 29416360 -60088193 - L2 LINE L2 0 3272 3216 2379 71 0 0 chr17 29416427 29416724 -60087829 - AluY SINE Alu -14 297 1 752 80 0 0 chr17 29416824 29416924 -60087629 + AluY SINE Alu 205 304 -7 623 202 0 0 chr17 29416925 29417039 -60087514 - MER47A DNA MER2_type -252 114 1 370 176 114 79 chr17 29417087 29417336 -60087217 + Charlie7 DNA MER1_type 7 2612 0 7091 30 5 0 chr17 29417364 29418207 -60086346 - L1PA4 LINE L1 -1044 5102 4256 7613 36 0 1 chr17 29418207 29419275 -60085278 + L1PA4 LINE L1 5085 6151 -4 358 145 92 0 chr17 29419294 29419370 -60085183 - MER3 DNA MER1_type 0 2585 2503 1856 155 3 19 chr17 29419370 29419687 -60084866 + AluJb SINE Alu 1 312 0 356 161 0 0 chr17 29419689 29419745 -60084808 - MER3 DNA MER1_type -117 92 37 601 254 102 20 chr17 29419745 29419942 -60084611 + MIR SINE MIR 50 262 0 330 241 36 12 chr17 29420404 29420487 -60084066 - MIR SINE MIR -118 144 60 1983 73 0 8 chr17 29420943 29421204 -60083349 - AluY SINE Alu -52 259 1 2162 93 0 0 chr17 29421213 29421502 -60083051 - AluSg SINE Alu -21 289 1 2096 98 0 3 chr17 29421544 29421830 -60082723 - AluSx SINE Alu -1 311 27 731 105 19 9 chr17 29421931 29422064 -60082489 + AluSg/x SINE Alu 183 310 0 848 178 48 0 chr17 29422214 29422360 -60082193 - FRAM SINE Alu -12 154 2 301 290 19 19 chr17 29422580 29422687 -60081866 + MIR SINE MIR 40 146 -116 660 135 0 57 chr17 29423270 29423411 -60081142 - SVA Other Other -791 595 463 1564 168 23 30 chr17 29423411 29423714 -60080839 - AluJo SINE Alu -11 301 1 1344 83 11 0 chr17 29423882 29424063 -60080490 - AluSp SINE Alu -120 193 11 254 229 14 29 chr17 29424074 29424144 -60080409 + Tigger2 DNA MER2_type 12 80 -2638 * 1977 142 39 18 chr17 29424138 29424469 -60080084 + Tigger2 DNA MER2_type 225 562 -2156 183 156 0 0 chr17 29424469 29424501 -60080052 + CT-rich Low_complexity Low_complexity 1 32 0 1978 138 7 0 chr17 29424501 29424806 -60079747 - AluSx SINE Alu -5 307 1 282 138 0 0 chr17 29424852 29424910 -60079643 + (T)n Simple_repeat Simple_repeat 1 58 0 289 295 98 54 chr17 29425909 29426245 -60078308 - L1MC5 LINE L1 -60 7901 7551 1237 125 0 0 chr17 29426299 29426475 -60078078 - AluSg/x SINE Alu -11 299 124 1845 146 6 19 chr17 29426475 29426791 -60077762 - AluSx SINE Alu 0 312 1 259 330 30 10 chr17 29426907 29427007 -60077546 + Tigger8 DNA MER2_type 522 623 -43 254 155 121 0 chr17 29427830 29427888 -60076665 - AluSp/q SINE Alu -8 295 231 1715 133 0 4 chr17 29427916 29428165 -60076388 - AluSx SINE Alu -64 248 1 1932 161 0 0 chr17 29428663 29428973 -60075580 + AluSx SINE Alu 1 310 -2 249 326 11 0 chr17 29428983 29429072 -60075481 - L3 LINE CR1 -352 1225 1136 342 61 0 0 chr17 29429393 29429442 -60075111 + (T)n Simple_repeat Simple_repeat 1 49 0 1646 144 3 67 chr17 29429657 29429837 -60074716 - AluJo SINE Alu -10 302 149 2019 134 3 3 chr17 29429837 29430136 -60074417 - AluSc SINE Alu -10 299 1 1646 144 3 67 chr17 29430136 29430268 -60074285 - AluJo SINE Alu -163 149 10 2158 116 6 0 chr17 29430343 29430654 -60073899 - AluSq SINE Alu 0 313 1 363 340 70 0 chr17 29430654 29430839 -60073714 - LTR67 LTR ERVL -5 552 355 536 120 32 80 chr17 29430900 29430936 -60073617 - MLT2B1 LTR ERVL 0 520 484 216 0 0 0 chr17 29430936 29430960 -60073593 + (CA)n Simple_repeat Simple_repeat 2 25 0 536 120 32 80 chr17 29430960 29431048 -60073505 - MLT2B1 LTR ERVL -36 484 402 1430 107 44 35 chr17 29431048 29431365 -60073188 + SVA Other Other 467 786 -600 282 102 51 51 chr17 29432175 29432234 -60072319 - L1M4 LINE L1 -688 5486 5428 353 137 0 0 chr17 29432234 29432285 -60072268 + U6 snRNA snRNA 1 51 -56 1127 147 20 10 chr17 29432285 29432551 -60072002 - L1M4 LINE L1 -737 5443 5176 317 324 110 0 chr17 29433481 29433670 -60070883 + MIR SINE MIR 33 241 -21 527 239 51 14 chr17 29434443 29434581 -60069972 - MIR3 SINE MIR -23 185 43 508 289 29 15 chr17 29434609 29434839 -60069714 - MIR SINE MIR -9 253 18 2041 120 0 10 chr17 29435244 29435545 -60069008 + AluSx SINE Alu 3 300 -12 515 238 16 24 chr17 29435697 29435823 -60068730 - MIR SINE MIR -118 144 20 282 233 39 19 chr17 29436011 29436114 -60068439 + (TATG)n Simple_repeat Simple_repeat 1 105 0 472 167 51 0 chr17 29436214 29436292 -60068261 - MER81 DNA DNA -32 82 1 1733 226 106 40 chr17 29436292 29436791 -60067762 + MER90 LTR ERV1 37 568 -7 2015 143 0 16 chr17 29436879 29437193 -60067360 + AluSx SINE Alu 1 309 -3 267 295 172 25 chr17 29437194 29437316 -60067237 - L2 LINE L2 -17 3255 3116 1964 108 0 69 chr17 29437614 29437948 -60066605 + AluSx SINE Alu 1 311 -1 1458 115 0 5 chr17 29438065 29438283 -60066270 + AluSq SINE Alu 86 302 -11 242 299 35 14 chr17 29438857 29438932 -60065621 + L1ME LINE L1 5257 5329 -817 2415 59 0 0 chr17 29438932 29439237 -60065316 + AluY SINE Alu 1 305 -6 242 299 35 14 chr17 29439237 29439305 -60065248 + L1ME LINE L1 5329 5403 -743 344 254 92 23 chr17 29439335 29439465 -60065088 + L1ME LINE L1 5469 5607 -514 1815 150 7 29 chr17 29439507 29439813 -60064740 - AluSx SINE Alu -13 299 1 201 39 0 0 chr17 29439824 29439850 -60064703 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 9742 30 3 156 chr17 29439850 29441458 -60063095 - SVA Other Other -23 1363 1 467 164 0 0 chr17 29441633 29441706 -60062847 - L1M3 LINE L1 -500 5683 5611 743 174 0 29 chr17 29441706 29441844 -60062709 - FRAM SINE Alu -8 168 35 908 114 0 0 chr17 29441845 29441976 -60062577 - L1M3 LINE L1 -565 5606 5476 2067 104 0 49 chr17 29442006 29442334 -60062219 - AluSx SINE Alu 0 312 1 1945 148 0 3 chr17 29442355 29442666 -60061887 - AluSg SINE Alu 0 310 1 299 160 0 0 chr17 29442666 29442716 -60061837 - L1M3 LINE L1 -680 5491 5442 1529 180 221 25 chr17 29442758 29443197 -60061356 + LTR64 LTR ERVK 22 546 -12 1538 183 12 72 chr17 29443200 29443419 -60061134 - L1M3 LINE L1 -729 5449 5218 1852 129 3 7 chr17 29443419 29443706 -60060847 - AluSx SINE Alu -26 286 1 1538 183 12 72 chr17 29443706 29443818 -60060735 - L1M3 LINE L1 -960 5218 5101 1797 133 9 25 chr17 29443818 29444135 -60060418 - AluJb SINE Alu 0 312 1 1538 183 12 72 chr17 29444135 29444355 -60060198 - L1M3 LINE L1 -1077 5101 4945 911 211 36 10 chr17 29444355 29444549 -60060004 - MER63B DNA MER1_type -237 199 1 2157 112 0 3 chr17 29444762 29445066 -60059487 - AluSq SINE Alu -10 303 1 1033 270 26 45 chr17 29445071 29445156 -60059397 + L1MEc LINE L1 1476 1561 -4835 1142 162 0 0 chr17 29445156 29445329 -60059224 - FAM SINE Alu -2 173 1 1033 270 26 45 chr17 29445329 29445624 -60058929 + L1MEc LINE L1 1561 1849 -4547 1980 108 0 48 chr17 29446434 29446748 -60057805 + AluSx SINE Alu 1 299 -13 2392 74 0 0 chr17 29446957 29447267 -60057286 + AluY SINE Alu 1 310 -1 1846 163 7 0 chr17 29447279 29447585 -60056968 + AluJb SINE Alu 1 308 -4 416 119 0 0 chr17 29447901 29447968 -60056585 - Alu SINE Alu -6 306 240 542 139 59 0 chr17 29448078 29448179 -60056374 - MER82 DNA MER2_type -182 471 365 1615 153 42 39 chr17 29448179 29448486 -60056067 - AluJb SINE Alu -4 308 1 294 274 24 0 chr17 29448487 29448571 -60055982 + LTR67 LTR ERVL 460 545 -12 185 282 146 0 chr17 29448647 29448757 -60055796 + L2 LINE L2 1634 1759 -1555 412 185 85 114 chr17 29448816 29449027 -60055526 + L1MEd LINE L1 940 1144 -4975 316 283 81 67 chr17 29449564 29449749 -60054804 - L1MCa LINE L1 -4233 2193 2003 1954 120 7 0 chr17 29449749 29450032 -60054521 - AluSx SINE Alu -27 285 1 316 283 81 67 chr17 29450032 29450069 -60054484 - L1MCa LINE L1 -4423 2003 1968 3479 244 115 44 chr17 29450091 29450732 -60053821 + HAL1 LINE L1 126 720 -1787 2301 89 3 0 chr17 29450732 29451035 -60053518 - AluSp SINE Alu -9 304 1 3479 244 115 44 chr17 29451035 29451208 -60053345 + HAL1 LINE L1 720 879 -1628 815 137 0 23 chr17 29451208 29451339 -60053214 + FLAM_A SINE Alu 5 132 -1 3479 244 115 44 chr17 29451339 29451890 -60052663 + HAL1 LINE L1 879 1589 -918 1883 117 0 34 chr17 29451891 29452209 -60052344 - AluSq SINE Alu 0 313 1 494 196 70 19 chr17 29452317 29452475 -60052078 - HAL1 LINE L1 -317 2190 2025 373 97 0 5 chr17 29452577 29452638 -60051915 - Alu SINE Alu -259 44 1 262 322 98 87 chr17 29452681 29453060 -60051493 + L2 LINE L2 2859 3241 -31 464 283 50 6 chr17 29453065 29453224 -60051329 + MER117 DNA MER1_type 6 171 -26 275 233 123 0 chr17 29453631 29453704 -60050849 + MIR SINE MIR 63 144 -64 194 158 0 53 chr17 29453704 29453742 -60050811 + MIR SINE MIR 111 146 -62 366 327 94 69 chr17 29454088 29454492 -60050061 - L2 LINE L2 -3 3269 2856 459 181 24 27 chr17 29454555 29454657 -60049896 - L1MEc LINE L1 -3964 3641 3499 736 191 0 0 chr17 29454657 29454783 -60049770 - FLAM_C SINE Alu -7 126 1 459 181 24 27 chr17 29454783 29454817 -60049736 - L1MEc LINE L1 -4106 3499 3466 2000 133 0 0 chr17 29454973 29455266 -60049287 + AluSx SINE Alu 1 293 -19 186 167 0 0 chr17 29455347 29455383 -60049170 + (TA)n Simple_repeat Simple_repeat 2 37 0 24 32 0 0 chr17 29455446 29455477 -60049076 + AT_rich Low_complexity Low_complexity 1 31 0 625 235 132 58 chr17 29456098 29456324 -60048229 - MIR SINE MIR 0 262 15 849 217 63 100 chr17 29456324 29456674 -60047879 + MER102b DNA MER1_type 4 340 -1 625 235 132 58 chr17 29456674 29456690 -60047863 - MIR SINE MIR -247 15 2 2375 104 0 7 chr17 29456994 29457303 -60047250 - AluSx SINE Alu 0 312 6 2492 90 0 3 chr17 29458225 29458535 -60046018 - AluSg SINE Alu -1 309 1 235 286 44 11 chr17 29458548 29458639 -60045914 + Tigger8 DNA MER2_type 214 307 -359 547 131 131 0 chr17 29459109 29459216 -60045337 + AluSq/x SINE Alu 11 131 -181 21 0 0 0 chr17 29459644 29459665 -60044888 + AT_rich Low_complexity Low_complexity 1 21 0 1999 159 3 0 chr17 29459671 29459966 -60044587 + AluJb SINE Alu 1 296 -16 1342 240 115 18 chr17 29460066 29460612 -60043941 + L1MEc LINE L1 1885 2483 -3913 825 186 0 0 chr17 29460614 29460743 -60043810 + FLAM_C SINE Alu 1 129 -14 22 43 0 21 chr17 29460743 29460769 -60043784 + AT_rich Low_complexity Low_complexity 1 27 -19 553 137 128 20 chr17 29460769 29460871 -60043682 - FLAM_C SINE Alu -17 116 4 22 43 0 21 chr17 29460871 29460891 -60043662 + AT_rich Low_complexity Low_complexity 27 46 0 411 242 16 8 chr17 29460894 29461018 -60043535 + L1MEc LINE L1 2431 2555 -3660 1900 117 0 4 chr17 29461020 29461269 -60043284 + AluSx SINE Alu 1 248 -64 1106 210 19 0 chr17 29461311 29461568 -60042985 + L1MEc LINE L1 2547 2808 -3407 309 283 43 0 chr17 29461610 29461748 -60042805 + L1MEc LINE L1 3038 3181 -3034 1028 296 74 63 chr17 29461758 29462573 -60041980 + ERVL LTR ERVL 4917 5740 -24 7819 153 19 11 chr17 29462773 29464278 -60040275 - L1PA14 LINE L1 -2 6159 4632 2486 87 0 7 chr17 29464278 29464587 -60039966 - AluSp SINE Alu -6 307 1 7819 153 19 11 chr17 29464587 29465333 -60039220 - L1PA14 LINE L1 -1529 4632 3893 265 292 0 0 chr17 29465349 29465397 -60039156 + MLT2B3 LTR ERVL 169 219 -301 191 59 0 29 chr17 29465397 29465431 -60039122 + (CAAAA)n Simple_repeat Simple_repeat 4 36 0 265 292 0 0 chr17 29465431 29465447 -60039106 + MLT2B3 LTR ERVL 218 233 -287 * 4462 167 28 51 chr17 29465433 29465784 -60038769 - MER21B LTR ERV1 -19 844 486 183 80 0 0 chr17 29465784 29465809 -60038744 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 4462 167 28 51 chr17 29465809 29465854 -60038699 - MER21B LTR ERV1 -377 486 441 1745 177 0 3 chr17 29465854 29466137 -60038416 + AluJb SINE Alu 1 282 -30 182 61 0 30 chr17 29466137 29466170 -60038383 + (TTAAA)n Simple_repeat Simple_repeat 4 35 0 4462 167 28 51 chr17 29466170 29466635 -60037918 - MER21B LTR ERV1 -420 443 1 758 227 10 63 chr17 29466652 29466859 -60037694 + MLT2B3 LTR ERVL 225 420 -134 1001 191 0 6 chr17 29466861 29467039 -60037514 - MER4E LTR ERV1 -1 778 602 2279 108 20 0 chr17 29467047 29467352 -60037201 + AluSx SINE Alu 1 311 -1 1132 166 0 20 chr17 29467354 29467553 -60037000 - MER4E LTR ERV1 -584 195 1 287 156 0 0 chr17 29467553 29467598 -60036955 + MLT2B2 LTR ERVL 368 412 -103 7216 56 6 45 chr17 29467606 29468599 -60035954 - SVA Other Other 0 1386 433 1004 90 20 30 chr17 29468612 29468813 -60035740 - SVA Other Other -592 794 596 198 0 0 0 chr17 29468930 29468952 -60035601 + (A)n Simple_repeat Simple_repeat 1 22 0 1956 140 13 36 chr17 29469592 29469726 -60034827 + AluSx SINE Alu 2 138 -174 2308 105 13 0 chr17 29469726 29470030 -60034523 + AluSx SINE Alu 1 308 -4 1956 140 13 36 chr17 29470030 29470203 -60034350 + AluSx SINE Alu 138 302 -10 2380 75 3 28 chr17 29470205 29470548 -60034005 + AluY SINE Alu 1 311 0 349 234 107 32 chr17 29471186 29471447 -60033106 + L1ME1 LINE L1 5667 5947 -219 23 33 0 0 chr17 29471642 29471672 -60032881 + AT_rich Low_complexity Low_complexity 1 30 0 2445 82 0 0 chr17 29471672 29471964 -60032589 - AluSx SINE Alu -20 292 1 1428 154 58 8 chr17 29471990 29472230 -60032323 - AluJb SINE Alu -60 252 1 2084 107 46 0 chr17 29472256 29472536 -60032017 + AluSg SINE Alu 1 293 -17 189 171 0 0 chr17 29472867 29472902 -60031651 + MIR SINE MIR 91 125 -83 1116 171 0 102 chr17 29473516 29473663 -60030890 + AluJb SINE Alu 1 115 -197 2435 90 0 3 chr17 29473663 29473964 -60030589 + AluSq SINE Alu 2 301 -12 1116 171 0 102 chr17 29473964 29474061 -60030492 + AluJb SINE Alu 115 220 -92 405 193 43 22 chr17 29474061 29474225 -60030328 + AluJ SINE Alu 86 302 -10 182 321 46 18 chr17 29474252 29474313 -60030240 + MIR SINE MIR 145 212 -50 2299 98 0 7 chr17 29474313 29474618 -60029935 + AluY SINE Alu 1 303 -8 182 321 46 18 chr17 29474618 29474665 -60029888 + MIR SINE MIR 212 256 -6 829 143 0 0 chr17 29475762 29475881 -60028672 + AluJb SINE Alu 14 132 -180 1770 67 5 0 chr17 29475884 29476093 -60028460 + AluSp SINE Alu 60 269 -44 2498 87 0 3 chr17 29476196 29476506 -60028047 - AluSq SINE Alu -4 309 1 495 306 34 0 chr17 29476656 29476803 -60027750 + MIR SINE MIR 4 155 -107 1155 277 100 32 chr17 29476808 29476917 -60027636 - L2 LINE L2 -1 3312 3212 2391 99 13 0 chr17 29476917 29477221 -60027332 + AluSx SINE Alu 1 308 -4 1155 277 100 32 chr17 29477221 29477657 -60026896 - L2 LINE L2 -101 3212 2735 810 279 67 39 chr17 29477662 29478200 -60026353 - L1MC5 LINE L1 -262 7699 7260 932 175 0 0 chr17 29478273 29478427 -60026126 - AluJo/FRAM SINE Alu -6 306 153 2094 144 3 0 chr17 29478428 29478727 -60025826 + AluSx SINE Alu 1 300 -12 2220 110 0 3 chr17 29478734 29479025 -60025528 + AluSx SINE Alu 5 294 -18 2321 89 0 10 chr17 29479028 29479321 -60025232 + AluSg SINE Alu 1 290 -20 1154 103 29 29 chr17 29479324 29479498 -60025055 + AluSg/x SINE Alu 137 310 -2 2229 112 0 0 chr17 29479651 29479938 -60024615 + AluSq SINE Alu 1 287 -26 24 32 0 0 chr17 29479938 29479969 -60024584 + AT_rich Low_complexity Low_complexity 1 31 0 969 177 25 20 chr17 29480025 29480089 -60024464 - MER3 DNA MER1_type 0 209 147 2133 74 70 0 chr17 29480089 29480359 -60024194 + AluSp SINE Alu 1 289 -24 212 0 36 0 chr17 29480359 29480387 -60024166 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 969 177 25 20 chr17 29480387 29480400 -60024153 - MER3 DNA MER1_type -62 147 136 2434 81 0 3 chr17 29480400 29480696 -60023857 + AluSx SINE Alu 1 295 -17 969 177 25 20 chr17 29480696 29480819 -60023734 - MER3 DNA MER1_type -73 136 6 21 0 0 0 chr17 29482345 29482366 -60022187 + GC_rich Low_complexity Low_complexity 1 21 0 2422 81 7 0 chr17 29482889 29483186 -60021367 - AluSp SINE Alu -14 299 1 2229 101 0 3 chr17 29483439 29483727 -60020826 + AluSx SINE Alu 1 287 -25 3444 155 36 12 chr17 29484600 29485270 -60019283 + L1MB2 LINE L1 5478 6163 -8 223 234 0 0 chr17 29485657 29485704 -60018849 - L2 LINE L2 0 3313 3267 2260 82 0 7 chr17 29486167 29486480 -60018073 + AluSc SINE Alu 1 311 0 233 287 129 30 chr17 29487641 29487742 -60016811 + MIR3 SINE MIR 11 121 -87 207 0 0 0 chr17 29487814 29487837 -60016716 + (T)n Simple_repeat Simple_repeat 1 23 0 262 304 54 16 chr17 29488541 29488725 -60015828 + L2 LINE L2 2902 3092 -180 311 295 201 0 chr17 29488744 29488893 -60015660 + MIR SINE MIR 82 260 -2 190 333 70 0 chr17 29488923 29488980 -60015573 + L2 LINE L2 3241 3301 -12 437 62 15 0 chr17 29488983 29489048 -60015505 + (TGGA)n Simple_repeat Simple_repeat 1 66 0 216 278 156 11 chr17 29490667 29490757 -60013796 - MIR SINE MIR -76 186 84 526 264 35 7 chr17 29490757 29490901 -60013652 - MER69A DNA AcHobo -3 174 27 235 224 58 0 chr17 29491325 29491410 -60013143 - MIR SINE MIR -76 132 41 951 274 193 41 chr17 29491538 29492400 -60012153 + L2 LINE L2 1584 2576 -738 845 125 0 29 chr17 29492444 29492580 -60011973 + FLAM_C SINE Alu 1 132 -1 588 277 167 16 chr17 29492584 29493031 -60011522 + L2 LINE L2 2736 3301 -12 2271 115 0 10 chr17 29493032 29493336 -60011217 + AluSx SINE Alu 1 301 -11 2658 52 0 3 chr17 29493344 29493650 -60010903 - AluY SINE Alu -6 305 1 474 264 30 100 chr17 29493819 29493925 -60010628 - MIR SINE MIR 0 262 179 2556 73 0 0 chr17 29493925 29494225 -60010328 + AluSx SINE Alu 1 300 -12 474 264 30 100 chr17 29494225 29494349 -60010204 - MIR SINE MIR -83 179 48 331 358 85 20 chr17 29494502 29494795 -60009758 - L2 LINE L2 -70 3202 2891 314 284 155 10 chr17 29495065 29495113 -60009440 - L2 LINE L2 -234 3079 3039 1741 139 19 4 chr17 29495113 29495372 -60009181 + AluJo SINE Alu 29 291 -21 314 284 155 10 chr17 29495372 29495517 -60009036 - L2 LINE L2 -274 3039 2858 1430 190 10 68 chr17 29495887 29496022 -60008531 + AluJb SINE Alu 1 142 -170 2333 99 3 0 chr17 29496022 29496316 -60008237 + AluSx SINE Alu 1 295 -17 1430 190 10 68 chr17 29496316 29496490 -60008063 + AluJb SINE Alu 142 292 -20 240 276 82 20 chr17 29496646 29496838 -60007715 + MIR SINE MIR 1 248 -14 1089 194 92 46 chr17 29497540 29497910 -60006643 - MER89 LTR ERV1 -72 487 1 525 175 10 0 chr17 29497979 29498076 -60006477 - FLAM_A SINE Alu -12 130 33 1849 145 11 11 chr17 29498154 29498335 -60006218 - AluJb SINE Alu 0 311 128 291 28 0 0 chr17 29498335 29498371 -60006182 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1849 145 11 11 chr17 29498371 29498500 -60006053 - AluJb SINE Alu -182 129 1 665 135 57 35 chr17 29498503 29498644 -60005909 + Charlie4 DNA MER1_type 1817 1960 -1 226 250 16 105 chr17 29498722 29498846 -60005707 + L2 LINE L2 2694 2806 -508 2002 136 0 30 chr17 29499494 29499795 -60004758 + AluJo SINE Alu 1 292 -20 341 293 40 0 chr17 29499819 29499918 -60004635 - MIR SINE MIR -58 204 102 279 83 133 17 chr17 29499963 29500023 -60004530 - MIR SINE MIR -148 114 48 622 306 59 12 chr17 29500436 29500955 -60003598 - L2 LINE L2 -223 3049 2500 753 242 97 74 chr17 29501822 29501853 -60002700 - Charlie4a DNA MER1_type -1515 446 417 1677 161 9 64 chr17 29501853 29502182 -60002371 + AluJo SINE Alu 1 311 -1 753 242 97 74 chr17 29502182 29502584 -60001969 - Charlie4a DNA MER1_type -1544 417 3 1991 144 0 13 chr17 29502940 29503246 -60001307 - AluJb SINE Alu -10 302 1 332 290 71 44 chr17 29503484 29503667 -60000886 + MIR SINE MIR 59 246 -16 284 207 126 11 chr17 29504007 29504094 -60000459 - MER91C DNA MER1_type -7 133 37 285 194 140 65 chr17 29504120 29504213 -60000340 + MIR SINE MIR 45 144 -118 212 205 72 48 chr17 29504762 29504845 -59999708 + MER91C DNA MER1_type 31 115 -25 994 156 56 0 chr17 29505797 29505976 -59998577 - MER5A DNA MER1_type 0 189 1 2163 122 0 0 chr17 29506141 29506429 -59998124 + AluJb SINE Alu 1 288 -24 21 0 0 0 chr17 29506430 29506451 -59998102 + AT_rich Low_complexity Low_complexity 1 21 0 297 233 0 0 chr17 29507219 29507279 -59997274 - MER81 DNA DNA -54 60 1 223 211 135 22 chr17 29508167 29508279 -59996274 - MIR SINE MIR -63 145 30 560 331 98 30 chr17 29508343 29508791 -59995762 - L2 LINE L2 -15 3257 2782 337 342 20 0 chr17 29508794 29508946 -59995607 + MER117 DNA MER1_type 1 155 -42 230 337 41 41 chr17 29509133 29509231 -59995322 - L2 LINE L2 -46 3226 3129 208 278 56 56 chr17 29510324 29510432 -59994121 - MIR SINE MIR -59 149 42 221 259 17 0 chr17 29513607 29513665 -59990888 + (TG)n Simple_repeat Simple_repeat 1 59 0 207 266 127 0 chr17 29515844 29515923 -59988630 + L2 LINE L2 3187 3275 -38 219 247 96 0 chr17 29516037 29516110 -59988443 + MIR3 SINE MIR 81 160 -48 330 310 6 6 chr17 29516709 29516880 -59987673 + (CA)n Simple_repeat Simple_repeat 2 172 0 713 291 62 4 chr17 29518394 29518900 -59985653 - L1P LINE L1 -722 5429 4903 1288 132 35 40 chr17 29518972 29519199 -59985354 + AluJo SINE Alu 74 299 -13 492 294 48 91 chr17 29519254 29519564 -59984989 - L1M4 LINE L1 -1300 4846 4524 680 165 47 24 chr17 29519564 29519691 -59984862 - FLAM_C SINE Alu -3 130 1 492 294 48 91 chr17 29519691 29519905 -59984648 - L1M4 LINE L1 -1622 4524 4363 1840 141 22 22 chr17 29519905 29520217 -59984336 - AluJb SINE Alu 0 312 1 492 294 48 91 chr17 29520217 29520457 -59984096 - L1M4 LINE L1 -1783 4363 4114 617 233 75 0 chr17 29520816 29520975 -59983578 - MIR SINE MIR -14 248 78 339 358 0 39 chr17 29525340 29525595 -59978958 + C-rich Low_complexity Low_complexity 1 245 0 525 204 0 0 chr17 29526420 29526567 -59977986 + (CA)n Simple_repeat Simple_repeat 2 148 0 468 51 0 0 chr17 29526708 29526767 -59977786 + (CA)n Simple_repeat Simple_repeat 2 60 0 210 320 0 40 chr17 29527242 29527317 -59977236 + MIR3 SINE MIR 116 187 -21 193 280 0 67 chr17 29527782 29527857 -59976696 - MIR SINE MIR -70 192 123 572 189 104 0 chr17 29528654 29528760 -59975793 + FLAM_A SINE Alu 4 120 -13 1524 140 0 0 chr17 29529223 29529451 -59975102 + AluSg/x SINE Alu 85 312 0 24 32 0 0 chr17 29529527 29529558 -59974995 + AT_rich Low_complexity Low_complexity 1 31 0 243 259 0 0 chr17 29529584 29529696 -59974857 + (TCCA)n Simple_repeat Simple_repeat 1 112 0 589 238 55 24 chr17 29531094 29531258 -59973295 + MIR SINE MIR 4 172 -90 291 292 0 11 chr17 29534424 29534513 -59970040 - MIR3 SINE MIR -43 165 78 342 236 264 0 chr17 29534941 29535051 -59969502 + MIR3 SINE MIR 27 165 -43 830 225 52 66 chr17 29535062 29535275 -59969278 + MER63A DNA MER1_type 1 210 0 1068 133 13 0 chr17 29535337 29535495 -59969058 + FRAM SINE Alu 1 160 -16 584 251 116 37 chr17 29536139 29536354 -59968199 - MIR SINE MIR 0 262 31 229 163 0 61 chr17 29536503 29536552 -59968001 + MIR SINE MIR 81 126 -82 741 285 24 40 chr17 29537171 29537420 -59967133 - MIR SINE MIR -11 251 7 218 294 29 0 chr17 29537899 29537967 -59966586 + MIR SINE MIR 81 150 -112 473 296 128 5 chr17 29538209 29538412 -59966141 + MIR SINE MIR 21 248 -14 2054 130 7 0 chr17 29538519 29538827 -59965726 + AluSx SINE Alu 1 310 -2 1238 119 0 0 chr17 29538828 29539005 -59965548 + AluSg/x SINE Alu 119 295 -15 558 310 150 0 chr17 29539034 29539260 -59965293 - MIR SINE MIR 0 262 3 341 306 28 28 chr17 29539276 29539420 -59965133 - MIR3 SINE MIR -6 202 59 453 76 0 0 chr17 29539919 29539985 -59964568 + (TC)n Simple_repeat Simple_repeat 1 66 0 325 245 132 19 chr17 29541664 29541770 -59962783 + MIR SINE MIR 79 196 -66 523 304 23 18 chr17 29542101 29542272 -59962281 - MIR SINE MIR -34 228 57 525 210 42 8 chr17 29542336 29542455 -59962098 + MIR3 SINE MIR 77 199 -9 253 244 13 14 chr17 29543195 29543285 -59961268 + MIR SINE MIR 42 131 -77 198 247 32 108 chr17 29545508 29545601 -59958952 + L3 LINE CR1 1487 1572 -5 345 269 19 9 chr17 29546063 29546171 -59958382 + MIR SINE MIR 33 141 -67 1219 90 6 0 chr17 29546182 29546349 -59958204 + L1PA7 LINE L1 5987 6154 0 194 267 160 0 chr17 29546406 29546481 -59958072 + MIR SINE MIR 170 256 -6 635 250 174 1 chr17 29546529 29546724 -59957829 - MIR SINE MIR 0 262 36 195 333 0 0 chr17 29547182 29547245 -59957308 - MIR SINE MIR -82 126 64 434 317 48 0 chr17 29548577 29548722 -59955831 + MIR3 SINE MIR 38 189 -19 2091 105 27 3 chr17 29551620 29551916 -59952637 + AluSx SINE Alu 1 303 -9 469 325 128 5 chr17 29552464 29552652 -59951901 - MIR SINE MIR -10 252 42 297 245 106 66 chr17 29553029 29553180 -59951373 - MIR3 SINE MIR -31 177 21 400 136 0 0 chr17 29554496 29554561 -59949992 + Tigger5 DNA MER2_type 14 78 -2245 383 155 14 0 chr17 29554561 29554632 -59949921 - Tigger5 DNA MER2_type -3 2320 2249 466 156 0 0 chr17 29554633 29554710 -59949843 + Tigger5 DNA MER2_type 2247 2323 0 2252 89 0 13 chr17 29555725 29556028 -59948525 + AluSx SINE Alu 1 299 -13 2136 128 0 0 chr17 29556041 29556337 -59948216 + AluSx SINE Alu 1 296 -16 306 0 0 0 chr17 29556898 29556932 -59947621 + (TG)n Simple_repeat Simple_repeat 1 34 0 297 0 0 0 chr17 29556931 29556964 -59947589 + (GA)n Simple_repeat Simple_repeat 1 33 0 * 1315 198 0 5 chr17 29557155 29557377 -59947176 - AluJo SINE Alu -91 221 1 847 197 39 30 chr17 29557452 29557685 -59946868 + Charlie4 DNA MER1_type 1 235 -1726 297 0 0 0 chr17 29557687 29558308 -59946245 + (TA)n Simple_repeat Simple_repeat 1 621 0 1696 149 34 40 chr17 29557717 29557985 -59946568 - MER7A DNA MER2_type -2693 345 77 2052 135 0 3 chr17 29557985 29558274 -59946279 + AluSx SINE Alu 1 288 -24 297 0 0 0 chr17 29558275 29558308 -59946245 + (TA)n Simple_repeat Simple_repeat 1 33 0 1696 149 34 40 chr17 29558308 29558386 -59946167 - MER7A DNA MER2_type -2960 78 1 1534 141 98 14 chr17 29558422 29558699 -59945854 + MER2 DNA MER2_type 29 328 -17 2260 98 0 0 chr17 29558740 29559017 -59945536 + AluSc SINE Alu 1 277 -32 360 0 0 0 chr17 29559019 29559059 -59945494 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 1747 143 33 18 chr17 29559168 29559440 -59945113 + AluJo SINE Alu 21 296 -16 2109 78 6 90 chr17 29559707 29560039 -59944514 + AluSx SINE Alu 1 304 -8 275 348 99 25 chr17 29560932 29561374 -59943179 + L2 LINE L2 2183 2657 -657 750 187 157 10 chr17 29561391 29561589 -59942964 + MIR SINE MIR 34 260 -2 461 169 0 0 chr17 29561754 29561825 -59942728 + AluJ/FLAM SINE Alu 14 84 -228 186 133 0 0 chr17 29561839 29561869 -59942684 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 238 294 135 31 chr17 29561878 29562041 -59942512 + L2 LINE L2 2920 3099 -173 216 162 0 0 chr17 29564097 29564134 -59940419 + C-rich Low_complexity Low_complexity 4 40 0 210 306 50 41 chr17 29566482 29566603 -59937950 - L3b LINE CR1 -168 1415 1294 753 212 69 5 chr17 29567654 29567843 -59936710 - MIR SINE MIR -48 214 14 23 0 0 0 chr17 29568791 29568814 -59935739 + GC_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr17 29568821 29568842 -59935711 + GC_rich Low_complexity Low_complexity 1 21 0 375 287 189 10 chr17 29569052 29569348 -59935205 + L2 LINE L2 2953 3301 -12 621 298 77 10 chr17 29569559 29569783 -59934770 - MIR SINE MIR -6 256 18 333 0 0 0 chr17 29569792 29569829 -59934724 + (CA)n Simple_repeat Simple_repeat 2 38 0 588 241 36 24 chr17 29571603 29571769 -59932784 - MER117 DNA MER1_type -19 178 11 2351 88 0 3 chr17 29571841 29572136 -59932417 + AluSg1 SINE Alu 1 294 -15 190 205 0 0 chr17 29573164 29573203 -59931350 + MIR SINE MIR 46 84 -124 400 318 112 33 chr17 29573361 29573691 -59930862 + L2 LINE L2 2618 2973 -341 222 217 0 0 chr17 29573707 29573753 -59930800 + L2 LINE L2 3227 3272 0 1831 185 10 3 chr17 29574181 29574473 -59930080 + AluJo SINE Alu 4 297 -15 2336 87 11 0 chr17 29575141 29575427 -59929126 - AluSc SINE Alu -20 289 1 1050 108 7 0 chr17 29575506 29575645 -59928908 + AluSc SINE Alu 2 141 -168 1780 104 4 0 chr17 29575645 29575875 -59928678 + AluSc SINE Alu 72 302 -7 1931 143 13 36 chr17 29576515 29576649 -59927904 + AluSx SINE Alu 2 138 -174 2308 105 13 0 chr17 29576649 29576953 -59927600 + AluSx SINE Alu 1 308 -4 1931 143 13 36 chr17 29576953 29577126 -59927427 + AluSx SINE Alu 138 302 -10 2420 77 3 10 chr17 29577128 29577470 -59927083 + AluY SINE Alu 1 311 0 349 234 107 32 chr17 29578108 29578369 -59926184 + L1ME1 LINE L1 5667 5947 -219 23 33 0 0 chr17 29578564 29578594 -59925959 + AT_rich Low_complexity Low_complexity 1 30 0 2445 82 0 0 chr17 29578594 29578886 -59925667 - AluSx SINE Alu -20 292 1 1428 154 58 8 chr17 29578912 29579152 -59925401 - AluJb SINE Alu -60 252 1 2084 107 46 0 chr17 29579178 29579458 -59925095 + AluSg SINE Alu 1 293 -17 189 171 0 0 chr17 29579789 29579824 -59924729 + MIR SINE MIR 91 125 -83 1865 162 0 38 chr17 29580438 29580585 -59923968 + AluJb SINE Alu 1 131 -181 2446 87 0 3 chr17 29580585 29580885 -59923668 + AluSq SINE Alu 2 300 -13 1865 162 0 38 chr17 29580885 29581051 -59923502 + AluJb SINE Alu 131 302 -10 585 271 81 68 chr17 29581054 29581674 -59922879 + L1M4 LINE L1 4032 4659 -1487 1755 149 22 67 chr17 29581760 29581900 -59922653 + AluJo SINE Alu 1 146 -166 2098 127 0 3 chr17 29581900 29582225 -59922328 + AluSx SINE Alu 1 324 0 1755 149 22 67 chr17 29582225 29582398 -59922155 + AluJo SINE Alu 146 301 -11 2262 130 0 9 chr17 29582428 29582743 -59921810 - AluSx SINE Alu 0 312 1 2094 144 3 0 chr17 29582746 29583045 -59921508 - AluSx SINE Alu -12 300 1 932 175 0 0 chr17 29583046 29583200 -59921353 + AluJo/FRAM SINE Alu 153 306 -6 810 281 67 39 chr17 29583273 29583811 -59920742 + L1MC5 LINE L1 7241 7699 -262 1155 278 100 32 chr17 29583818 29584253 -59920300 + L2 LINE L2 2736 3212 -101 2394 96 13 0 chr17 29584253 29584555 -59919998 - AluSx SINE Alu -6 306 1 1155 278 100 32 chr17 29584555 29584664 -59919889 + L2 LINE L2 3212 3312 -1 495 306 34 0 chr17 29584669 29584816 -59919737 - MIR SINE MIR -107 155 4 2468 93 0 3 chr17 29584966 29585277 -59919276 + AluSq SINE Alu 1 310 -3 1988 129 32 29 chr17 29585346 29585655 -59918898 + AluJb SINE Alu 1 310 -2 822 261 115 4 chr17 29585827 29586061 -59918492 + MIR SINE MIR 3 262 0 2377 100 0 0 chr17 29586381 29586692 -59917861 + AluSx SINE Alu 1 311 -1 650 250 82 26 chr17 29588273 29588505 -59916048 + MIR SINE MIR 17 261 -1 204 67 0 0 chr17 29596468 29596498 -59908055 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 208 0 30 30 chr17 29596541 29596574 -59907979 + (GAAA)n Simple_repeat Simple_repeat 4 36 0 601 313 97 60 chr17 29596574 29597143 -59907410 + L2 LINE L2 1782 2371 -943 1148 216 0 0 chr17 29597220 29597438 -59907115 + MER58A DNA MER1_type 5 222 -2 1026 173 13 91 chr17 29599116 29599347 -59905206 - AluJb SINE Alu -15 297 85 207 176 0 0 chr17 29600770 29600804 -59903749 + (CA)n Simple_repeat Simple_repeat 2 35 0 2273 124 3 0 chr17 29602677 29602983 -59901570 - AluSx SINE Alu -5 307 1 643 129 10 0 chr17 29603074 29603175 -59901378 - AluJo SINE Alu -178 134 33 1962 145 0 38 chr17 29603284 29603417 -59901136 + AluJb SINE Alu 1 138 -174 2376 75 7 0 chr17 29603417 29603710 -59900843 + AluSp SINE Alu 1 295 -18 1962 145 0 38 chr17 29603710 29603893 -59900660 + AluJb SINE Alu 138 305 -7 333 273 151 15 chr17 29603929 29604088 -59900465 - L1ME LINE L1 -615 5506 5325 2025 152 10 0 chr17 29604837 29605134 -59899419 - AluSx SINE Alu -12 300 1 1527 197 66 67 chr17 29605190 29605255 -59899298 - Charlie2 DNA MER1_type -103 2759 2695 2437 88 0 0 chr17 29605255 29605551 -59899002 - AluSx SINE Alu -16 296 1 1527 197 66 67 chr17 29605551 29605780 -59898773 - Charlie2 DNA MER1_type -167 2695 2467 1719 196 0 7 chr17 29605780 29606081 -59898472 + AluJb SINE Alu 1 299 -13 1527 197 66 67 chr17 29606081 29606394 -59898159 - Charlie2 DNA MER1_type -395 2467 2150 1959 145 3 3 chr17 29606394 29606677 -59897876 - AluJo SINE Alu -24 288 6 1527 197 66 67 chr17 29606677 29606737 -59897816 - Charlie2 DNA MER1_type -712 2150 2091 2557 79 0 0 chr17 29606741 29607046 -59897507 + AluSg SINE Alu 1 305 -5 918 103 0 81 chr17 29607048 29607222 -59897331 + L1MA2 LINE L1 6145 6304 0 423 233 17 33 chr17 29607304 29607424 -59897129 - Charlie2 DNA MER1_type -2657 125 8 1371 195 96 11 chr17 29607445 29607717 -59896836 - AluJo SINE Alu -7 295 1 211 194 0 0 chr17 29608051 29608087 -59896466 + GA-rich Low_complexity Low_complexity 2 37 0 1623 148 116 25 chr17 29609620 29609904 -59894649 + AluSx SINE Alu 1 310 -2 30 0 0 0 chr17 29610022 29610052 -59894501 + AT_rich Low_complexity Low_complexity 1 30 0 335 313 57 8 chr17 29610114 29610360 -59894193 + HAL1 LINE L1 1122 1379 -1128 22 0 0 0 chr17 29610438 29610460 -59894093 + AT_rich Low_complexity Low_complexity 1 22 0 2550 66 0 0 chr17 29610466 29610768 -59893785 + AluY SINE Alu 1 302 -9 1076 169 0 0 chr17 29610970 29611130 -59893423 + FRAM SINE Alu 5 164 -12 2263 118 0 0 chr17 29611134 29611438 -59893115 + AluSg SINE Alu 5 308 -2 2279 108 0 3 chr17 29611618 29611913 -59892640 + AluSx SINE Alu 1 294 -18 2313 89 0 10 chr17 29611916 29612209 -59892344 + AluSg SINE Alu 1 290 -20 1151 103 29 29 chr17 29612212 29612386 -59892167 + AluSg/x SINE Alu 137 310 -2 2218 112 0 0 chr17 29612538 29612825 -59891728 + AluSq SINE Alu 1 287 -26 24 32 0 0 chr17 29612825 29612856 -59891697 + AT_rich Low_complexity Low_complexity 1 31 0 956 177 25 20 chr17 29612912 29612976 -59891577 - MER3 DNA MER1_type 0 209 147 2119 74 70 0 chr17 29612976 29613246 -59891307 + AluSp SINE Alu 1 289 -24 212 0 36 0 chr17 29613246 29613274 -59891279 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 956 177 25 20 chr17 29613274 29613287 -59891266 - MER3 DNA MER1_type -62 147 136 2420 81 0 3 chr17 29613287 29613583 -59890970 + AluSx SINE Alu 1 295 -17 956 177 25 20 chr17 29613583 29613706 -59890847 - MER3 DNA MER1_type -73 136 6 21 0 0 0 chr17 29615232 29615253 -59889300 + GC_rich Low_complexity Low_complexity 1 21 0 667 264 35 25 chr17 29615722 29615919 -59888634 - MIR SINE MIR -2 260 62 1082 126 53 80 chr17 29616176 29616322 -59888231 + MER33 DNA MER1_type 2 150 -2435 1482 132 87 56 chr17 29616322 29616452 -59888101 + AluJo SINE Alu 2 126 -186 2412 71 3 3 chr17 29616452 29616748 -59887805 + AluSx SINE Alu 1 296 -16 1482 132 87 56 chr17 29616748 29616904 -59887649 + AluJo SINE Alu 126 297 -15 1082 126 53 80 chr17 29616904 29616993 -59887560 + MER33 DNA MER1_type 150 240 -2345 1922 152 28 0 chr17 29616993 29617276 -59887277 - AluJo SINE Alu -21 291 1 2189 128 3 6 chr17 29617285 29617597 -59886956 - AluSx SINE Alu -1 311 1 1082 126 53 80 chr17 29617597 29617651 -59886902 + MER33 DNA MER1_type 248 294 -30 1533 143 8 13 chr17 29617672 29617910 -59886643 - AluJb SINE Alu -75 237 1 21 0 0 0 chr17 29617910 29617931 -59886622 + AT_rich Low_complexity Low_complexity 1 21 0 228 68 0 114 chr17 29618199 29618243 -59886310 - AluSx SINE Alu -8 293 255 1213 145 0 12 chr17 29618243 29618415 -59886138 - AluSx SINE Alu -142 170 1 455 145 58 0 chr17 29618415 29618484 -59886069 - AluJ/FRAM SINE Alu -17 295 223 441 127 0 0 chr17 29618498 29618561 -59885992 - U4 snRNA snRNA -82 63 1 519 161 49 0 chr17 29618576 29618657 -59885896 - AluJ/FLAM SINE Alu -225 87 3 2135 127 10 0 chr17 29618750 29619042 -59885511 - AluSx SINE Alu -17 295 1 2068 89 34 14 chr17 29619050 29619342 -59885211 - AluSg SINE Alu -12 298 1 29 0 0 0 chr17 29619345 29619374 -59885179 + AT_rich Low_complexity Low_complexity 1 29 0 244 233 0 0 chr17 29619562 29619622 -59884931 + T-rich Low_complexity Low_complexity 1 60 0 6783 68 14 26 chr17 29619629 29621459 -59883094 - SVA Other Other -799 1382 5 243 0 0 0 chr17 29621487 29621514 -59883039 + (GGGAGA)n Simple_repeat Simple_repeat 5 31 0 644 156 0 0 chr17 29621538 29621647 -59882906 - AluSp/q SINE Alu -3 310 202 2058 105 11 11 chr17 29621686 29621963 -59882590 - AluSp SINE Alu -19 294 18 2411 75 0 3 chr17 29621966 29622260 -59882293 - AluSc SINE Alu -16 293 1 1457 185 47 37 chr17 29622263 29622561 -59881992 - AluJo SINE Alu -11 301 1 2214 103 0 73 chr17 29622957 29623286 -59881267 + AluSq SINE Alu 1 305 -8 738 200 8 0 chr17 29623294 29623424 -59881129 + FLAM_C SINE Alu 1 131 -2 28 0 0 0 chr17 29623464 29623492 -59881061 + AT_rich Low_complexity Low_complexity 1 28 0 289 267 40 80 chr17 29623541 29623617 -59880936 - MIR SINE MIR -61 147 85 2337 105 0 0 chr17 29623617 29623921 -59880632 + AluSx SINE Alu 3 306 -6 289 267 40 80 chr17 29623921 29623994 -59880559 - MIR SINE MIR -123 85 11 1980 146 7 7 chr17 29624512 29624807 -59879746 - AluSx SINE Alu -16 296 2 1880 126 15 7 chr17 29625185 29625456 -59879097 - AluSx SINE Alu -2 310 38 682 102 0 10 chr17 29625820 29625918 -59878635 + AluSg/x SINE Alu 210 306 -3 2212 113 3 17 chr17 29625919 29626221 -59878332 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr17 29628333 29628354 -59876199 + AT_rich Low_complexity Low_complexity 1 21 0 215 79 26 0 chr17 29630860 29630898 -59873655 + (TA)n Simple_repeat Simple_repeat 1 39 0 189 219 0 24 chr17 29631518 29631559 -59872994 - L2 LINE L2 -84 3229 3190 1086 141 0 25 chr17 29633914 29634077 -59870476 - AluSg/x SINE Alu -14 298 140 2394 101 3 0 chr17 29634079 29634385 -59870168 - AluSx SINE Alu -5 307 1 1354 199 132 0 chr17 29634396 29634668 -59869885 - AluSx SINE Alu -4 308 1 23 0 0 0 chr17 29634674 29634697 -59869856 + AT_rich Low_complexity Low_complexity 1 23 0 889 94 0 65 chr17 29635496 29635634 -59868919 + FLAM_C SINE Alu 2 130 -3 2464 75 3 0 chr17 29638947 29639254 -59865299 + AluSg SINE Alu 1 308 -2 298 311 101 20 chr17 29639337 29639518 -59865035 - MIR3 SINE MIR -54 208 3 313 267 280 33 chr17 29641057 29641207 -59863346 + MIR SINE MIR 4 190 -72 2520 94 0 0 chr17 29641208 29641561 -59862992 + AluSc SINE Alu 1 353 0 426 306 95 70 chr17 29641570 29641919 -59862634 + L2 LINE L2 2215 2554 -718 2280 101 10 0 chr17 29641919 29642215 -59862338 - AluSq SINE Alu -14 299 1 426 306 95 70 chr17 29642215 29642521 -59862032 + L2 LINE L2 2554 2896 -376 5129 141 45 20 chr17 29642521 29643363 -59861190 + MER21B LTR ERV1 1 863 0 426 306 95 70 chr17 29643363 29643525 -59861028 + L2 LINE L2 2896 3053 -219 2332 73 28 3 chr17 29643563 29643851 -59860702 - AluY SINE Alu -16 295 1 1542 126 0 27 chr17 29643887 29644109 -59860444 - AluSq SINE Alu -93 220 5 2154 122 0 3 chr17 29644805 29645101 -59859452 + AluSg SINE Alu 1 295 -15 717 186 34 0 chr17 29645237 29645355 -59859198 - FLAM_A SINE Alu -15 127 6 289 141 0 94 chr17 29645362 29645452 -59859101 - AluJb SINE Alu 0 302 236 2020 125 3 24 chr17 29645452 29645609 -59858944 - AluSg SINE Alu -21 289 130 275 0 29 0 chr17 29645609 29645644 -59858909 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2113 122 3 3 chr17 29645644 29645931 -59858622 - AluSq SINE Alu -26 287 1 2020 125 3 24 chr17 29645931 29646067 -59858486 - AluSg SINE Alu -178 132 1 1616 158 0 8 chr17 29646069 29646310 -59858243 - AluJb SINE Alu -67 245 7 1960 150 0 7 chr17 29646318 29646611 -59857942 - AluJb SINE Alu -21 291 1 2149 132 0 19 chr17 29646618 29646936 -59857617 - AluSx SINE Alu 0 312 1 1586 189 43 53 chr17 29647209 29647585 -59856968 + MLT1A2 LTR MaLR 3 374 0 1951 183 34 8 chr17 29648573 29648929 -59855624 + MLT1A1 LTR MaLR 1 365 0 189 0 0 0 chr17 29648992 29649013 -59855540 + (TCCCC)n Simple_repeat Simple_repeat 1 21 0 188 381 114 38 chr17 29651986 29652091 -59852462 + L2 LINE L2 3141 3253 -19 541 179 58 80 chr17 29652588 29652812 -59851741 + L1MC5 LINE L1 7691 7909 -52 818 149 7 64 chr17 29652909 29653050 -59851503 + FLAM_C SINE Alu 1 133 0 891 154 0 0 chr17 29653813 29653956 -59850597 - AluSg/x SINE Alu -1 311 169 286 266 13 0 chr17 29655000 29655079 -59849474 - MER116 DNA Mariner 0 80 1 224 311 151 25 chr17 29655206 29655325 -59849228 - L2 LINE L2 0 3272 3139 25 23 0 23 chr17 29656237 29656265 -59848288 + AT_rich Low_complexity Low_complexity 1 29 -13 2213 99 3 3 chr17 29656265 29656559 -59847994 + AluSg SINE Alu 1 294 -16 25 23 0 23 chr17 29656559 29656573 -59847980 + AT_rich Low_complexity Low_complexity 29 42 0 389 302 13 44 chr17 29657062 29657204 -59847349 + MIR SINE MIR 20 163 -45 861 211 0 17 chr17 29657207 29657387 -59847166 + MER8 DNA MER2_type 1 177 -62 271 193 105 0 chr17 29657365 29657422 -59847131 + MER2 DNA MER2_type 283 345 0 * 479 105 26 13 chr17 29657422 29657491 -59847062 - Tigger2 DNA MER2_type -2648 70 1 2260 103 0 26 chr17 29657512 29657823 -59846730 + AluSg SINE Alu 1 303 -7 2294 78 0 10 chr17 29658523 29658829 -59845724 + AluY SINE Alu 2 304 -7 204 67 0 0 chr17 29661100 29661130 -59843423 + (CCG)n Simple_repeat Simple_repeat 1 30 0 797 148 0 15 chr17 29661824 29661959 -59842594 - FLAM_A SINE Alu 0 133 1 2266 96 0 0 chr17 29663441 29663742 -59840811 + AluSx SINE Alu 1 301 -11 620 162 24 14 chr17 29663754 29664005 -59840548 + AluJ SINE Alu 2 303 -9 216 239 83 55 chr17 29664032 29664093 -59840460 + MIR SINE MIR 145 212 -50 2213 88 0 7 chr17 29664093 29664398 -59840155 + AluY SINE Alu 1 303 -8 216 239 83 55 chr17 29664398 29664445 -59840108 + MIR SINE MIR 212 256 -6 1437 174 51 14 chr17 29665542 29665664 -59838889 + AluJb SINE Alu 14 130 -182 1996 67 4 0 chr17 29665664 29665917 -59838636 + AluSp SINE Alu 60 313 0 1437 174 51 14 chr17 29665917 29666069 -59838484 + AluJb SINE Alu 130 298 -14 2250 71 3 0 chr17 29666094 29666404 -59838149 - AluSp SINE Alu 0 311 1 261 101 0 203 chr17 29666621 29666656 -59837897 - FAM SINE Alu -136 179 167 2238 88 0 52 chr17 29666656 29666984 -59837569 + AluSq SINE Alu 1 311 -2 261 101 0 203 chr17 29666984 29667027 -59837526 - FAM SINE Alu -148 167 117 797 255 53 0 chr17 29667028 29667216 -59837337 - AluJo SINE Alu -108 204 7 1670 153 32 7 chr17 29667235 29667516 -59837037 - AluSx SINE Alu -24 288 1 356 307 205 6 chr17 29667608 29667774 -59836779 + MIR SINE MIR 20 218 -44 198 0 0 0 chr17 29667932 29667954 -59836599 + (TG)n Simple_repeat Simple_repeat 2 23 0 6466 158 42 49 chr17 29667956 29668177 -59836376 + L1MC3 LINE L1 6134 6355 22 1058 168 12 0 chr17 29668177 29668350 -59836203 + FAM SINE Alu 1 175 0 6466 158 42 49 chr17 29668350 29668456 -59836097 + L1MC3 LINE L1 6355 6460 127 2128 112 3 0 chr17 29668456 29668760 -59835793 - AluSg SINE Alu -5 305 1 6466 158 42 49 chr17 29668760 29669683 -59834870 + L1MC3 LINE L1 6460 6122 -211 2014 89 7 4 chr17 29669683 29669991 -59834562 + AluSg SINE Alu 1 309 0 6466 158 42 49 chr17 29669991 29670122 -59834431 + L1MC3 LINE L1 6121 6251 -82 1489 153 76 11 chr17 29670181 29670456 -59834097 + AluJo SINE Alu 1 293 -19 2035 107 3 17 chr17 29670685 29670822 -59833731 + AluSx SINE Alu 1 138 -174 2052 125 0 19 chr17 29670822 29671133 -59833420 + AluSg SINE Alu 1 305 -5 2035 107 3 17 chr17 29671133 29671295 -59833258 + AluSx SINE Alu 138 296 -16 336 138 46 31 chr17 29672303 29672368 -59832185 + AluJo SINE Alu 115 180 -122 286 143 41 0 chr17 29672373 29672422 -59832131 - Alu SINE Alu -249 51 1 25 0 0 0 chr17 29672431 29672456 -59832097 + AT_rich Low_complexity Low_complexity 1 25 0 1945 132 3 10 chr17 29672456 29672760 -59831793 + AluSx SINE Alu 1 302 -10 2189 109 0 0 chr17 29673104 29673407 -59831146 + AluSg SINE Alu 6 308 -2 707 169 17 0 chr17 29673419 29673537 -59831016 + FLAM_C SINE Alu 1 120 -13 1859 150 3 0 chr17 29673557 29673850 -59830703 - AluJb SINE Alu -18 294 1 27 29 0 0 chr17 29673850 29673884 -59830669 + AT_rich Low_complexity Low_complexity 1 34 0 1325 179 16 12 chr17 29673886 29674132 -59830421 + AluJb SINE Alu 1 247 -65 5600 54 5 331 chr17 29674405 29676428 -59828125 - SVA Other Other 0 1386 23 199 281 56 22 chr17 29676441 29676530 -59828023 + MER5B DNA MER1_type 85 176 -2 394 211 35 105 chr17 29676654 29676768 -59827785 - MER5A DNA MER1_type -3 186 81 241 316 0 13 chr17 29677123 29677199 -59827354 + L2 LINE L2 3194 3268 -4 180 0 0 0 chr17 29677240 29677260 -59827293 + (A)n Simple_repeat Simple_repeat 1 20 0 568 301 129 10 chr17 29677495 29677704 -59826849 + MIR SINE MIR 21 254 -8 801 136 0 0 chr17 29679985 29680110 -59824443 - FRAM SINE Alu -10 166 42 2007 299 75 30 chr17 29680141 29680382 -59824171 + L2 LINE L2 1865 2094 -1220 2012 106 11 0 chr17 29680382 29680665 -59823888 + AluSx SINE Alu 1 286 -26 2007 299 75 30 chr17 29680665 29681279 -59823274 + L2 LINE L2 2094 2758 -556 267 239 283 18 chr17 29681517 29681630 -59822923 + L2 LINE L2 3159 3301 -12 2032 102 0 24 chr17 29681633 29681928 -59822625 + AluSx SINE Alu 2 289 -23 201 39 0 0 chr17 29681929 29681955 -59822598 + (TATATG)n Simple_repeat Simple_repeat 6 31 0 774 169 0 0 chr17 29681955 29682079 -59822474 + FRAM SINE Alu 29 152 -24 199 224 20 20 chr17 29682102 29682151 -59822402 + L2 LINE L2 2709 2757 -557 814 97 79 0 chr17 29682855 29682969 -59821584 + AluSc SINE Alu 167 289 -20 2234 106 3 0 chr17 29682976 29683288 -59821265 + AluSq SINE Alu 1 313 0 394 343 34 23 chr17 29683719 29683894 -59820659 + MIR SINE MIR 15 191 -71 263 234 31 0 chr17 29684702 29684766 -59819787 - L2 LINE L2 -3 3269 3204 2387 56 7 3 chr17 29684783 29685086 -59819467 - AluSp SINE Alu -9 304 1 300 235 78 61 chr17 29685386 29685501 -59819052 - MIR SINE MIR -75 187 71 694 196 48 12 chr17 29685577 29685745 -59818808 + Charlie1b DNA MER1_type 114 287 -236 2038 108 0 3 chr17 29685750 29686037 -59818516 - AluSx SINE Alu -26 286 1 827 131 25 0 chr17 29686044 29686166 -59818387 - AluSq/x SINE Alu -185 127 3 819 166 61 22 chr17 29686170 29686210 -59818343 + Charlie1b DNA MER1_type 274 311 -2450 1584 120 94 11 chr17 29686210 29686500 -59818053 + AluSx SINE Alu 1 312 0 819 166 61 22 chr17 29686500 29686688 -59817865 + Charlie1b DNA MER1_type 311 511 -12 269 336 50 25 chr17 29687750 29687869 -59816684 - L2 LINE L2 -9 3263 3142 241 222 19 0 chr17 29688132 29688186 -59816367 + (TA)n Simple_repeat Simple_repeat 1 55 0 377 221 58 18 chr17 29688186 29688296 -59816257 - L1MCa LINE L1 -1339 6983 1995 325 294 24 0 chr17 29688221 29688306 -59816247 + L1MC3 LINE L1 6571 6657 -1128 * 322 264 88 57 chr17 29688913 29689072 -59815481 - L2 LINE L2 -1 3312 3149 1604 172 28 3 chr17 29691924 29692209 -59812344 + AluJo SINE Alu 3 294 -18 2018 114 0 39 chr17 29692224 29692368 -59812185 + AluSq SINE Alu 1 128 -185 1991 112 3 36 chr17 29692368 29692673 -59811880 + AluSx SINE Alu 1 295 -17 2018 114 0 39 chr17 29692673 29692835 -59811718 + AluSq SINE Alu 128 295 -18 2212 95 0 3 chr17 29694369 29694665 -59809888 + AluSx SINE Alu 3 297 -15 489 167 0 0 chr17 29694679 29694757 -59809796 + FRAM/FAM SINE Alu 1 77 -99 1738 129 3 32 chr17 29694884 29695195 -59809358 - AluSp SINE Alu -11 302 1 2219 102 0 3 chr17 29695363 29695666 -59808887 - AluSx SINE Alu -10 302 1 29 0 0 0 chr17 29695737 29695766 -59808787 + AT_rich Low_complexity Low_complexity 1 29 0 1185 161 0 22 chr17 29696703 29696926 -59807627 - AluJb SINE Alu -10 302 85 189 0 0 0 chr17 29696928 29696949 -59807604 + (T)n Simple_repeat Simple_repeat 1 21 0 1710 74 22 9 chr17 29697002 29697233 -59807320 - L1PA8 LINE L1 0 6172 5939 744 114 9 0 chr17 29697487 29697601 -59806952 - AluSg/x SINE Alu -5 305 191 2284 53 0 0 chr17 29697705 29698027 -59806526 - AluY SINE Alu 0 322 1 2050 154 15 28 chr17 29698027 29698417 -59806136 - L1 LINE L1 -2218 3928 3544 817 157 8 15 chr17 29698633 29698767 -59805786 + FLAM_C SINE Alu 1 133 0 31 0 0 0 chr17 29698767 29698798 -59805755 + AT_rich Low_complexity Low_complexity 1 31 0 452 249 46 52 chr17 29698815 29698988 -59805565 + AluSc SINE Alu 119 290 -19 993 166 5 27 chr17 29699413 29699430 -59805123 + AluJo SINE Alu 120 136 -176 2273 75 3 0 chr17 29699430 29699724 -59804829 + AluSg SINE Alu 1 295 -15 2398 63 0 3 chr17 29699724 29700026 -59804527 + AluY SINE Alu 1 301 -10 993 166 5 27 chr17 29700026 29700194 -59804359 + AluJo SINE Alu 134 302 -10 1869 166 0 3 chr17 29700197 29700504 -59804049 + AluSx SINE Alu 5 310 -2 1201 184 31 86 chr17 29700601 29700927 -59803626 - AluJo SINE Alu 0 312 5 21 0 0 0 chr17 29701018 29701039 -59803514 + AT_rich Low_complexity Low_complexity 1 21 0 1284 178 33 4 chr17 29701173 29701448 -59803105 + L1MA8 LINE L1 4195 4477 -1669 1929 138 0 10 chr17 29701452 29701757 -59802796 + AluSq SINE Alu 5 306 -7 970 162 67 0 chr17 29701757 29701981 -59802572 + L1MA8 LINE L1 5190 5426 -742 1034 174 0 15 chr17 29701982 29702177 -59802376 + AluJb SINE Alu 121 312 0 3513 136 62 14 chr17 29702183 29702823 -59801730 + L1MA8 LINE L1 5442 6112 -179 290 259 0 0 chr17 29702833 29702891 -59801662 + Tigger3(Golem) DNA MER2_type 22 79 -2950 1693 169 13 0 chr17 29702894 29703196 -59801357 + AluJo SINE Alu 1 306 -6 367 267 12 108 chr17 29703197 29703455 -59801098 + L1ME4a LINE L1 5645 5877 -244 329 188 0 0 chr17 29703572 29703620 -59800933 + AluSp SINE Alu 137 184 -119 268 266 0 0 chr17 29704490 29704554 -59799999 + MIR SINE MIR 161 224 -38 1902 126 27 7 chr17 29704729 29705030 -59799523 - AluSx SINE Alu -5 307 1 339 307 223 37 chr17 29705039 29705335 -59799218 + L3 LINE CR1 1225 1575 -2 217 225 101 80 chr17 29705370 29705508 -59799045 - MIR SINE MIR 0 262 122 1421 170 31 0 chr17 29705528 29705787 -59798766 + AluJo SINE Alu 14 280 -32 1388 195 34 7 chr17 29705843 29706135 -59798418 + AluJo SINE Alu 1 300 -12 182 310 58 11 chr17 29706137 29706224 -59798329 - L2 LINE L2 -190 3123 3033 2146 65 61 0 chr17 29706374 29706651 -59797902 - AluY SINE Alu -17 294 1 2331 83 0 0 chr17 29706707 29707007 -59797546 - AluSc SINE Alu -9 300 1 2229 68 0 39 chr17 29707032 29707343 -59797210 - AluY SINE Alu -12 299 1 1690 164 7 3 chr17 29707348 29707641 -59796912 - AluJo SINE Alu -17 295 2 2238 74 10 0 chr17 29707765 29708063 -59796490 - AluSp SINE Alu -12 301 1 467 320 50 17 chr17 29708356 29708537 -59796016 + L2 LINE L2 1807 1993 -1321 * 1041 171 4 92 chr17 29708533 29708772 -59795781 - AluJb SINE Alu -9 303 86 571 241 361 4 chr17 29708772 29709046 -59795507 + L2 LINE L2 1981 2352 -962 2238 69 3 13 chr17 29709052 29709356 -59795197 - AluY SINE Alu -10 301 1 916 35 0 17 chr17 29709357 29709472 -59795081 - AluSc SINE Alu -196 113 1 854 246 26 64 chr17 29709498 29709881 -59794672 + L2 LINE L2 2732 3102 -211 241 333 118 31 chr17 29709954 29710149 -59794404 + L2 LINE L2 3101 3312 -1 896 168 52 0 chr17 29710292 29710447 -59794106 - AluSg/x SINE Alu -17 295 133 2084 94 7 3 chr17 29710448 29710745 -59793808 - AluY SINE Alu -13 298 1 349 317 96 30 chr17 29710794 29710961 -59793592 + L1MC4 LINE L1 6613 6790 -1252 1988 120 0 3 chr17 29711276 29711568 -59792985 + AluSg SINE Alu 1 291 -19 2150 73 0 14 chr17 29711649 29711938 -59792615 + AluY SINE Alu 1 285 -26 23 0 0 0 chr17 29711941 29711964 -59792589 + AT_rich Low_complexity Low_complexity 1 23 0 1079 36 0 36 chr17 29712320 29712457 -59792096 + AluY SINE Alu 1 132 -179 2212 103 0 0 chr17 29712492 29712793 -59791760 + AluSg SINE Alu 1 301 -9 2121 106 10 19 chr17 29713071 29713383 -59791170 + AluSq SINE Alu 1 309 -4 2048 119 3 0 chr17 29713397 29713691 -59790862 + AluSx SINE Alu 4 298 -14 213 132 0 0 chr17 29714000 29714038 -59790515 + (T)n Simple_repeat Simple_repeat 1 38 0 678 99 0 11 chr17 29714606 29714697 -59789856 + AluSg/x SINE Alu 69 158 -152 540 167 0 0 chr17 29714799 29714877 -59789676 - AluJ/FLAM SINE Alu -233 79 2 346 281 39 21 chr17 29714881 29715035 -59789518 - MIR SINE MIR -63 145 33 213 65 0 0 chr17 29715335 29715366 -59789187 + (ATG)n Simple_repeat Simple_repeat 2 32 0 2145 89 7 7 chr17 29715367 29715524 -59789029 - AluSq SINE Alu -22 291 132 1886 101 40 34 chr17 29715524 29715821 -59788732 - AluSq SINE Alu -14 299 1 2145 89 7 7 chr17 29715821 29715954 -59788599 - AluSq SINE Alu -180 133 1 2280 55 3 64 chr17 29716718 29717046 -59787507 - AluY SINE Alu -3 308 1 2348 74 10 0 chr17 29717647 29717946 -59786607 - AluSp SINE Alu -11 302 1 1810 181 0 0 chr17 29718063 29718361 -59786192 - AluJo SINE Alu -14 298 1 1980 127 0 29 chr17 29718566 29718873 -59785680 - AluSx SINE Alu -14 298 1 216 0 0 0 chr17 29718902 29718926 -59785627 + (A)n Simple_repeat Simple_repeat 1 24 0 1868 127 14 10 chr17 29719023 29719315 -59785238 - AluSg1 SINE Alu -16 293 1 1805 249 67 94 chr17 29719451 29720658 -59783895 + L1MC4 LINE L1 6730 7903 -139 284 266 0 16 chr17 29720798 29720862 -59783691 - AluJb SINE Alu -61 241 179 * 329 175 63 0 chr17 29720840 29720903 -59783650 + AluJ/FRAM SINE Alu 232 298 -4 1706 151 33 10 chr17 29721228 29721532 -59783021 + AluSx SINE Alu 1 311 -1 1622 149 38 14 chr17 29722132 29722421 -59782132 + AluJb SINE Alu 1 296 -16 2024 95 0 83 chr17 29723625 29723950 -59780603 - AluY SINE Alu -13 298 1 1657 157 24 11 chr17 29725239 29725572 -59778981 - AluJb SINE Alu 0 312 1 383 299 152 51 chr17 29725607 29726041 -59778512 + L3 LINE CR1 1081 1558 -19 2366 57 0 35 chr17 29726973 29727287 -59777266 + AluSg SINE Alu 1 303 -7 184 225 0 25 chr17 29727737 29727817 -59776736 + GA-rich Low_complexity Low_complexity 1 78 0 225 227 45 0 chr17 29728149 29728215 -59776338 + (CCCCAG)n Simple_repeat Simple_repeat 2 70 0 749 127 9 9 chr17 29728931 29729041 -59775512 + AluJb SINE Alu 106 215 -97 189 121 0 0 chr17 29730143 29730176 -59774377 + (A)n Simple_repeat Simple_repeat 1 33 0 1374 120 5 23 chr17 29730190 29730269 -59774284 - AluSx SINE Alu -100 212 133 2228 66 36 10 chr17 29730269 29730572 -59773981 - AluY SINE Alu 0 311 1 1374 120 5 23 chr17 29730572 29730708 -59773845 - AluSx SINE Alu -179 133 1 522 252 69 25 chr17 29732993 29733152 -59771401 + MIR SINE MIR 31 196 -66 209 154 0 115 chr17 29733255 29733307 -59771246 + MIR SINE MIR 215 260 -2 21 36 0 0 chr17 29734473 29734501 -59770052 + GC_rich Low_complexity Low_complexity 1 28 0 1807 97 60 7 chr17 29735783 29736082 -59768471 - AluJb SINE Alu 0 313 1 206 232 71 0 chr17 29736097 29736153 -59768400 + MIR SINE MIR 67 126 -82 1163 62 56 0 chr17 29736390 29736551 -59768002 + AluY SINE Alu 142 311 0 2171 84 3 10 chr17 29737829 29738127 -59766426 + AluSp SINE Alu 1 296 -17 1518 186 7 20 chr17 29738667 29738973 -59765580 - AluJb SINE Alu -10 302 1 605 280 102 18 chr17 29738982 29739207 -59765346 - L2 LINE L2 -854 2460 2217 474 291 0 0 chr17 29739207 29739317 -59765236 - L2 LINE L2 -1 3271 3162 544 261 167 0 chr17 29739358 29739538 -59765015 - MIR SINE MIR -13 249 40 2148 77 0 56 chr17 29740180 29740503 -59764050 + AluY SINE Alu 1 305 -6 200 305 49 0 chr17 29741304 29741386 -59763167 + L2 LINE L2 3104 3189 -83 7701 25 6 0 chr17 29741569 29743008 -59761545 - L1PA4 LINE L1 -1 6154 4709 405 284 43 19 chr17 29744142 29744304 -59760249 - MIR SINE MIR -15 247 82 298 219 16 0 chr17 29745111 29745175 -59759378 - L2 LINE L2 -1 3312 3248 2236 85 3 0 chr17 29745244 29745539 -59759014 - AluSg SINE Alu -14 296 1 269 332 82 69 chr17 29745554 29745801 -59758752 - L2 LINE L2 -20 3252 2999 2196 110 0 0 chr17 29745801 29746102 -59758451 + AluSg SINE Alu 6 306 -4 269 332 82 69 chr17 29746102 29746158 -59758395 - L2 LINE L2 -273 2999 2945 1662 58 0 5 chr17 29748105 29748312 -59756241 + AluY SINE Alu 1 206 -105 352 56 0 0 chr17 29748312 29748366 -59756187 + AluY SINE Alu 247 300 0 511 140 66 88 chr17 29748437 29748573 -59755980 + FLAM_C SINE Alu 1 133 0 2365 90 0 0 chr17 29748584 29748896 -59755657 + AluSx SINE Alu 1 312 0 31 0 0 0 chr17 29750123 29750154 -59754399 + GC_rich Low_complexity Low_complexity 1 31 0 385 239 35 26 chr17 29750517 29750630 -59753923 - MIR SINE MIR -103 159 46 321 237 2 0 chr17 29751397 29751467 -59753086 + AluSp SINE Alu 130 187 -116 21 138 0 0 chr17 29751652 29751681 -59752872 + AT_rich Low_complexity Low_complexity 1 29 0 248 295 126 11 chr17 29756931 29757026 -59747527 + MIR SINE MIR 89 194 -68 783 175 0 0 chr17 29757190 29757316 -59747237 + AluSg/x SINE Alu 166 291 -21 1934 93 34 28 chr17 29757323 29757614 -59746939 + AluSc SINE Alu 1 293 -16 1237 171 156 12 chr17 29757898 29758007 -59746546 + AluSx SINE Alu 1 93 -209 2091 109 0 7 chr17 29758007 29758310 -59746243 + AluSq SINE Alu 1 301 -12 1237 171 156 12 chr17 29758310 29758457 -59746096 + AluSx SINE Alu 93 294 -8 1984 125 14 0 chr17 29758829 29759117 -59745436 + AluSg SINE Alu 1 292 -18 1778 70 4 0 chr17 29759123 29759351 -59745202 + AluY SINE Alu 83 311 0 296 106 0 0 chr17 29759419 29759469 -59745084 + Alu SINE Alu 1 38 -270 198 103 0 0 chr17 29759469 29759498 -59745055 + (TTA)n Simple_repeat Simple_repeat 2 30 0 252 86 0 0 chr17 29759877 29759912 -59744641 + (A)n Simple_repeat Simple_repeat 1 35 0 2021 116 0 30 chr17 29759966 29760267 -59744286 - AluSx SINE Alu -20 292 1 2095 139 3 0 chr17 29760866 29761175 -59743378 - AluSx SINE Alu 0 312 3 1383 183 62 24 chr17 29761176 29761466 -59743087 - AluJo SINE Alu -11 301 1 2165 107 0 3 chr17 29761842 29762141 -59742412 + AluSx SINE Alu 1 298 -14 205 175 0 25 chr17 29766417 29766457 -59738096 + GA-rich Low_complexity Low_complexity 3 41 0 388 353 87 0 chr17 29766591 29766775 -59737778 - MIR SINE MIR -8 254 55 2226 95 0 19 chr17 29766830 29767145 -59737408 + AluSx SINE Alu 2 310 -2 2247 96 0 3 chr17 29768884 29769186 -59735367 + AluSg SINE Alu 2 302 -8 2234 71 3 14 chr17 29769196 29769492 -59735061 + AluSg1 SINE Alu 3 295 -14 338 303 103 18 chr17 29770216 29770381 -59734172 + MIR SINE MIR 84 262 0 1129 119 0 0 chr17 29770674 29770833 -59733720 + AluSg/x SINE Alu 147 305 -7 837 198 6 6 chr17 29770835 29771002 -59733551 + AluJo/FRAM SINE Alu 137 303 -9 2211 101 10 0 chr17 29771005 29771313 -59733240 + AluSp SINE Alu 1 311 -2 1110 188 52 0 chr17 29771802 29772015 -59732538 + MER58A DNA MER1_type 1 224 0 2083 115 7 13 chr17 29772713 29773018 -59731535 + AluSq SINE Alu 1 303 -10 2403 63 0 7 chr17 29773695 29773998 -59730555 - AluSq SINE Alu -12 301 1 1852 136 7 4 chr17 29774008 29774317 -59730236 - AluSx SINE Alu 0 310 1 1709 76 16 24 chr17 29775137 29775388 -59729165 + AluY SINE Alu 55 303 -8 1395 112 0 0 chr17 29775401 29775597 -59728956 - AluSc SINE Alu -113 196 1 459 195 229 8 chr17 29776137 29776255 -59728298 + FRAM SINE Alu 23 166 -10 239 117 39 39 chr17 29779387 29779464 -59725089 + C-rich Low_complexity Low_complexity 3 79 0 204 267 23 23 chr17 29780241 29780327 -59724226 + G-rich Low_complexity Low_complexity 4 89 0 2467 71 0 3 chr17 29780733 29781042 -59723511 - AluSx SINE Alu -4 308 1 451 284 117 19 chr17 29782208 29782472 -59722081 - L2 LINE L2 0 3313 3024 1039 130 0 0 chr17 29782490 29782644 -59721909 - AluSg/x SINE Alu -25 287 134 2076 87 6 37 chr17 29782645 29782967 -59721586 - AluSx SINE Alu 0 312 1 331 329 74 23 chr17 29782968 29783184 -59721369 - L2 LINE L2 -239 3033 2807 1110 126 11 0 chr17 29783225 29783399 -59721154 - AluY SINE Alu -3 308 133 2196 106 0 10 chr17 29783403 29783715 -59720838 - AluSq SINE Alu -4 309 1 1728 168 13 0 chr17 29783719 29784022 -59720531 - AluSq SINE Alu -6 307 1 24 0 0 0 chr17 29784129 29784153 -59720400 + AT_rich Low_complexity Low_complexity 1 24 0 995 254 42 16 chr17 29785134 29785512 -59719041 - L1ME4a LINE L1 -3 6118 5731 2027 135 3 0 chr17 29786697 29787001 -59717552 + AluSx SINE Alu 1 305 -7 2071 124 3 0 chr17 29787449 29787747 -59716806 + AluSx SINE Alu 1 299 -13 2370 70 0 0 chr17 29787773 29788073 -59716480 + AluY SINE Alu 1 300 -11 695 173 0 47 chr17 29788109 29788236 -59716317 + FLAM_A SINE Alu 3 123 -10 2431 44 7 3 chr17 29788246 29788541 -59716012 + AluY SINE Alu 1 296 -15 1110 123 0 0 chr17 29788555 29788709 -59715844 + AluSq SINE Alu 1 154 -159 191 294 49 84 chr17 29788710 29788794 -59715759 + L3b LINE CR1 1298 1383 -200 1452 176 45 52 chr17 29788794 29788926 -59715627 + AluJb SINE Alu 5 136 -166 2406 74 0 0 chr17 29788926 29789225 -59715328 + AluY SINE Alu 3 301 -10 1452 176 45 52 chr17 29789225 29789382 -59715171 + AluJb SINE Alu 136 292 -10 2213 97 0 3 chr17 29789383 29789682 -59714871 + AluSx SINE Alu 1 298 -14 191 294 49 84 chr17 29789682 29789738 -59714815 + L3b LINE CR1 1382 1435 -148 2032 106 10 14 chr17 29790922 29791214 -59713339 + AluSx SINE Alu 1 291 -21 487 205 33 86 chr17 29791404 29791555 -59712998 + MIR3 SINE MIR 60 202 -6 1438 158 17 47 chr17 29792096 29792229 -59712324 + AluJo SINE Alu 11 146 -166 1841 138 35 0 chr17 29792229 29792518 -59712035 + AluSx SINE Alu 1 299 -13 1956 117 38 0 chr17 29792519 29792809 -59711744 + AluSx SINE Alu 1 301 -11 1438 158 17 47 chr17 29792809 29792971 -59711582 + AluJo SINE Alu 145 299 -13 540 319 174 17 chr17 29794936 29795293 -59709260 + L3 LINE CR1 973 1385 -192 389 338 79 21 chr17 29795318 29795558 -59708995 - MIR SINE MIR -2 260 7 281 338 37 22 chr17 29795546 29795682 -59708871 + L3 LINE CR1 1434 1571 -6 * 448 305 86 5 chr17 29798582 29798769 -59705784 + MIR SINE MIR 40 241 -21 279 303 0 0 chr17 29800083 29800159 -59704394 + CT-rich Low_complexity Low_complexity 5 80 0 253 260 16 57 chr17 29801547 29801670 -59702883 + CT-rich Low_complexity Low_complexity 5 122 0 667 279 40 15 chr17 29802473 29802674 -59701879 + MIR SINE MIR 8 213 -49 255 307 89 0 chr17 29803018 29803119 -59701434 - L2 LINE L2 -3 3269 3160 255 157 0 0 chr17 29803121 29803172 -59701381 + G-rich Low_complexity Low_complexity 1 51 0 192 333 103 11 chr17 29804304 29804391 -59700162 + L2 LINE L2 1862 1956 -1358 488 66 0 0 chr17 29804396 29804493 -59700060 - Alu SINE Alu 0 316 220 341 299 17 34 chr17 29804626 29804803 -59699750 + GA-rich Low_complexity Low_complexity 2 175 0 * 372 328 0 53 chr17 29804733 29804922 -59699631 + A-rich Low_complexity Low_complexity 2 180 0 864 198 32 29 chr17 29804983 29805261 -59699292 + AluSx SINE Alu 33 311 -1 753 141 39 8 chr17 29805420 29805548 -59699005 - AluJo SINE Alu -176 136 5 2144 116 10 7 chr17 29805865 29806175 -59698378 - AluSx SINE Alu -1 311 1 1929 141 0 0 chr17 29807561 29807838 -59696715 + AluSx SINE Alu 1 277 -35 180 97 0 0 chr17 29807849 29807880 -59696673 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2280 110 0 0 chr17 29807932 29808242 -59696311 + AluSp SINE Alu 2 311 -2 542 226 45 45 chr17 29808633 29808766 -59695787 - FLAM_A SINE Alu 0 133 1 2229 88 3 36 chr17 29809082 29809387 -59695166 - AluSp SINE Alu -18 295 1 200 292 0 0 chr17 29809665 29809713 -59694840 + GA-rich Low_complexity Low_complexity 3 50 0 198 103 0 0 chr17 29809836 29809865 -59694688 + (GGAAA)n Simple_repeat Simple_repeat 5 33 0 1444 186 33 7 chr17 29809866 29810141 -59694412 - AluSx SINE Alu -30 282 1 2438 75 3 0 chr17 29811010 29811316 -59693237 + AluY SINE Alu 1 307 -4 2186 98 0 14 chr17 29812291 29812577 -59691976 + AluSg SINE Alu 17 298 -12 1762 158 23 26 chr17 29812586 29812889 -59691664 + AluSq SINE Alu 6 307 -6 2265 95 3 3 chr17 29813723 29814018 -59690535 + AluSx SINE Alu 1 295 -17 2226 95 20 3 chr17 29814034 29814328 -59690225 + AluSq SINE Alu 1 299 -14 862 152 0 67 chr17 29814692 29814839 -59689714 + FRAM SINE Alu 1 23 -153 2574 54 0 22 chr17 29814839 29815155 -59689398 + AluY SINE Alu 1 309 -2 862 152 0 67 chr17 29815155 29815172 -59689381 + FRAM SINE Alu 23 40 0 242 267 22 7 chr17 29815867 29816002 -59688551 + L1M4 LINE L1 5248 5384 -762 2088 115 3 26 chr17 29817229 29817533 -59687020 - AluSx SINE Alu -15 297 1 2374 92 3 3 chr17 29817544 29817847 -59686706 - AluSc SINE Alu -6 303 1 257 214 60 119 chr17 29817969 29818137 -59686416 - MIR SINE MIR -3 259 102 2068 119 3 16 chr17 29818272 29818584 -59685969 + AluSq SINE Alu 1 308 -5 1046 125 0 13 chr17 29818584 29818736 -59685817 + AluSg/x SINE Alu 132 281 -29 1458 196 44 40 chr17 29818902 29819198 -59685355 + AluJo SINE Alu 1 297 -5 1176 187 4 22 chr17 29819198 29819423 -59685130 + AluJo SINE Alu 86 306 -6 224 314 16 66 chr17 29819570 29819691 -59684862 - L2 LINE L2 -164 3108 2994 347 358 13 13 chr17 29819844 29819995 -59684558 - L2 LINE L2 -568 2746 2596 224 301 266 0 chr17 29820136 29820249 -59684304 - MIR SINE MIR -71 191 49 261 241 170 9 chr17 29820305 29820417 -59684136 + MIR3 SINE MIR 14 143 -65 451 154 0 0 chr17 29820899 29820964 -59683589 + AluJ/FLAM SINE Alu 2 66 -246 658 129 88 95 chr17 29820965 29821112 -59683441 + AluJo/FRAM SINE Alu 165 310 -2 1835 88 8 0 chr17 29821116 29821382 -59683171 + AluSx SINE Alu 45 312 0 585 207 0 0 chr17 29821549 29821660 -59682893 - L1ME LINE L1 -417 5747 5637 2214 97 0 29 chr17 29821663 29821972 -59682581 - AluY SINE Alu -11 300 1 2267 106 3 0 chr17 29821982 29822283 -59682270 - AluY SINE Alu -9 302 1 967 202 29 4 chr17 29822283 29822526 -59682027 - L1ME LINE L1 -874 5272 5024 809 153 0 0 chr17 29822527 29822645 -59681908 + FLAM_C SINE Alu 1 118 -25 239 53 0 26 chr17 29822648 29822686 -59681867 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr17 29822686 29822707 -59681846 + AT_rich Low_complexity Low_complexity 1 21 0 344 164 15 0 chr17 29822727 29822794 -59681759 - L1ME LINE L1 -1236 4910 4843 1358 109 16 0 chr17 29822810 29823003 -59681550 - AluSg/x SINE Alu -3 307 112 2355 97 3 0 chr17 29823171 29823480 -59681073 - AluSx SINE Alu -2 310 1 2138 104 0 46 chr17 29823491 29823818 -59680735 - AluSx SINE Alu 0 312 1 26 0 0 0 chr17 29823819 29823845 -59680708 + AT_rich Low_complexity Low_complexity 1 26 0 2102 105 35 0 chr17 29824104 29824389 -59680164 - AluSx SINE Alu -7 305 11 1216 76 0 0 chr17 29825177 29825322 -59679231 - AluSg1 SINE Alu -164 145 1 2100 108 0 17 chr17 29825353 29825505 -59679048 - AluSc SINE Alu -26 283 137 2249 115 3 0 chr17 29825505 29825817 -59678736 - AluSp SINE Alu 0 313 1 2100 108 0 17 chr17 29825817 29825952 -59678601 - AluSc SINE Alu -172 137 1 2056 142 3 0 chr17 29825983 29826271 -59678282 + AluJb SINE Alu 1 289 -23 2106 122 7 7 chr17 29826280 29826574 -59677979 + AluSq SINE Alu 1 294 -19 2038 122 31 3 chr17 29826598 29826885 -59677668 + AluSq SINE Alu 1 295 -18 619 182 0 18 chr17 29826885 29826995 -59677558 - AluJo/FLAM SINE Alu -194 118 11 254 283 106 18 chr17 29827248 29827361 -59677192 + MIR SINE MIR 23 145 -117 2183 124 3 0 chr17 29827365 29827664 -59676889 + AluSx SINE Alu 1 300 -12 2142 88 4 4 chr17 29827664 29827937 -59676616 + AluSg SINE Alu 1 273 -37 1206 74 0 0 chr17 29828042 29828191 -59676362 - AluSp/q SINE Alu 0 313 165 1705 166 7 23 chr17 29828225 29828532 -59676021 + AluJb SINE Alu 1 302 -10 1413 206 24 73 chr17 29828714 29828849 -59675704 - L1ME1 LINE L1 -38 6128 5988 2316 87 3 7 chr17 29828849 29829148 -59675405 - AluSg SINE Alu -12 298 1 1413 206 24 73 chr17 29829148 29829161 -59675392 - L1ME1 LINE L1 -178 5988 5976 1521 106 173 16 chr17 29829161 29829416 -59675137 - AluSg SINE Alu -5 295 1 1413 206 24 73 chr17 29829416 29829689 -59674864 - L1ME1 LINE L1 -190 5976 5727 1866 135 0 17 chr17 29829943 29830240 -59674313 + AluSq SINE Alu 1 292 -21 1043 168 0 11 chr17 29830253 29830438 -59674115 + AluSg/x SINE Alu 130 312 0 328 198 2 0 chr17 29830438 29830497 -59674056 - L1MC4 LINE L1 -1339 6983 2006 1023 164 12 0 chr17 29830512 29830677 -59673876 + AluSg/x SINE Alu 132 298 -14 453 318 51 17 chr17 29830786 29830962 -59673591 + L2 LINE L2 1807 1988 -1326 1127 171 4 92 chr17 29830963 29831202 -59673351 - AluJb SINE Alu -9 303 86 1061 266 193 41 chr17 29831202 29831481 -59673072 + L2 LINE L2 1981 2216 -1098 2609 63 0 0 chr17 29831481 29831782 -59672771 - AluY SINE Alu -10 301 1 1741 180 3 3 chr17 29831787 29832082 -59672471 - AluJo SINE Alu -9 303 9 1061 266 193 41 chr17 29832082 29832376 -59672177 + L2 LINE L2 2219 2648 -666 1444 84 52 5 chr17 29832388 29832579 -59671974 - AluSp SINE Alu -21 292 93 408 149 0 30 chr17 29832682 29832749 -59671804 - AluS SINE Alu -245 66 2 268 242 141 61 chr17 29832754 29832853 -59671700 + L2 LINE L2 3198 3304 -9 1734 159 0 49 chr17 29833077 29833385 -59671168 - AluJb SINE Alu -14 298 6 2109 118 20 10 chr17 29833397 29833703 -59670850 - AluSq SINE Alu -4 309 1 291 0 0 49 chr17 29833793 29833834 -59670719 + AluSq SINE Alu 19 57 -244 1980 200 72 30 chr17 29833835 29834305 -59670248 - LTR2B LTR ERV1 0 490 1 1731 127 8 0 chr17 29834306 29834550 -59670003 + AluSq SINE Alu 56 301 -12 1900 119 6 61 chr17 29834564 29834875 -59669678 + AluSg SINE Alu 1 294 -16 2389 70 13 10 chr17 29834877 29835196 -59669357 + AluY SINE Alu 1 311 0 1294 112 0 0 chr17 29835203 29835372 -59669181 + AluSx SINE Alu 1 169 -143 271 279 68 54 chr17 29835701 29835848 -59668705 + L2 LINE L2 2924 3072 -200 824 154 0 22 chr17 29836147 29836283 -59668270 + FLAM_C SINE Alu 1 133 0 2024 107 45 3 chr17 29836299 29836589 -59667964 + AluSg SINE Alu 1 302 -8 2305 110 13 0 chr17 29836595 29836894 -59667659 + AluSx SINE Alu 3 305 -7 511 338 104 45 chr17 29837044 29837867 -59666686 + L2 LINE L2 2188 3059 -213 693 101 10 0 chr17 29837980 29838079 -59666474 + HY3 scRNA scRNA 1 100 -1 219 69 0 0 chr17 29838079 29838108 -59666445 + (A)n Simple_repeat Simple_repeat 1 29 0 1167 159 0 0 chr17 29838113 29838283 -59666270 - AluSg/x SINE Alu -12 300 131 360 0 0 0 chr17 29838283 29838323 -59666230 + (TG)n Simple_repeat Simple_repeat 1 40 0 248 91 0 0 chr17 29838336 29838369 -59666184 - Alu SINE Alu -34 268 236 1431 174 3 69 chr17 29838469 29838627 -59665926 - AluJo SINE Alu -27 285 155 2340 106 3 0 chr17 29838627 29838929 -59665624 - AluSp SINE Alu -10 303 1 1431 174 3 69 chr17 29838929 29839075 -59665478 - AluJo SINE Alu -157 155 1 288 274 26 17 chr17 29839092 29839209 -59665344 + (TG)n Simple_repeat Simple_repeat 1 118 0 321 274 26 18 chr17 29839275 29839388 -59665165 + MIR3 SINE MIR 90 203 -5 2099 125 3 3 chr17 29840220 29840515 -59664038 - AluSx SINE Alu -17 295 1 1823 159 0 72 chr17 29840533 29840866 -59663687 - AluJb SINE Alu -1 311 3 189 278 93 0 chr17 29840921 29840975 -59663578 - MIR SINE MIR -138 124 66 349 323 106 14 chr17 29840994 29841211 -59663342 - MIR SINE MIR -6 256 20 317 260 31 31 chr17 29841368 29841464 -59663089 - MIR SINE MIR -88 174 79 2292 103 7 3 chr17 29841583 29841893 -59662660 + AluSx SINE Alu 1 311 -1 277 294 7 119 chr17 29841982 29842046 -59662507 - L2 LINE L2 -208 3064 3023 1943 140 27 0 chr17 29842046 29842338 -59662215 + AluJb SINE Alu 6 305 -7 277 294 7 119 chr17 29842338 29842416 -59662137 - L2 LINE L2 -249 3023 2938 200 81 81 0 chr17 29842927 29842964 -59661589 + A-rich Low_complexity Low_complexity 3 42 0 890 143 0 27 chr17 29844007 29844154 -59660399 + FLAM_C SINE Alu 1 143 0 707 200 24 0 chr17 29844821 29844946 -59659607 + FLAM_A SINE Alu 1 128 -5 2410 97 0 3 chr17 29844950 29845260 -59659293 + AluSx SINE Alu 1 309 -3 1681 150 23 39 chr17 29845273 29845420 -59659133 + AluJb SINE Alu 9 157 -155 2056 109 0 0 chr17 29845420 29845687 -59658866 + AluSx SINE Alu 34 300 -12 1681 150 23 39 chr17 29845687 29845845 -59658708 + AluJb SINE Alu 157 309 -3 2537 84 0 0 chr17 29847486 29847797 -59656756 + AluY SINE Alu 1 311 0 324 210 36 149 chr17 29848350 29848545 -59656008 + MIR SINE MIR 69 241 -21 2745 39 0 0 chr17 29850255 29850560 -59653993 + AluY SINE Alu 1 305 -6 901 188 7 7 chr17 29850601 29850755 -59653798 - FRAM SINE Alu -24 152 1 285 211 90 83 chr17 29850761 29850894 -59653659 - L2 LINE L2 -16 3297 3164 496 47 0 93 chr17 29850895 29850981 -59653572 - MER2 DNA MER2_type -137 208 131 1646 147 16 42 chr17 29851112 29851286 -59653267 - AluJb SINE Alu -8 304 140 2293 103 3 3 chr17 29851286 29851588 -59652965 - AluSp SINE Alu -9 304 3 1646 147 16 42 chr17 29851588 29851725 -59652828 - AluJb SINE Alu -172 140 1 267 250 15 0 chr17 29851725 29851793 -59652760 + MER2 DNA MER2_type 272 340 -5 1355 174 87 47 chr17 29851831 29852130 -59652423 - AluJb SINE Alu -1 311 1 2251 68 39 0 chr17 29852136 29852416 -59652137 - AluY SINE Alu -20 291 1 1476 193 0 85 chr17 29852443 29852599 -59651954 - AluJb SINE Alu -23 289 121 2254 108 16 0 chr17 29852599 29852906 -59651647 - AluSq SINE Alu -1 312 1 1476 193 0 85 chr17 29852906 29852961 -59651592 - AluJb SINE Alu -191 121 63 195 42 0 0 chr17 29852961 29852985 -59651568 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2055 88 0 4 chr17 29852990 29853251 -59651302 - AluSq SINE Alu -53 260 1 1476 193 0 85 chr17 29853251 29853348 -59651205 - AluJb SINE Alu -253 59 1 2107 119 0 0 chr17 29853359 29853662 -59650891 - AluSg SINE Alu 0 304 2 2432 81 7 0 chr17 29854824 29855122 -59649431 - AluSp SINE Alu -13 300 1 2590 63 0 0 chr17 29855128 29855431 -59649122 - AluSq SINE Alu -8 305 3 2654 43 3 0 chr17 29856063 29856368 -59648185 + AluY SINE Alu 1 306 -5 1912 147 6 31 chr17 29856368 29856504 -59648049 + AluJb SINE Alu 2 140 -172 2140 128 3 7 chr17 29856504 29856802 -59647751 + AluSx SINE Alu 1 297 -15 2465 77 3 0 chr17 29856805 29857115 -59647438 + AluY SINE Alu 1 311 0 1912 147 6 31 chr17 29857115 29857293 -59647260 + AluJb SINE Alu 142 312 0 2231 127 0 0 chr17 29857299 29857606 -59646947 + AluY SINE Alu 1 307 -4 2496 70 0 0 chr17 29857607 29857905 -59646648 + AluY SINE Alu 1 298 -13 896 184 17 40 chr17 29857905 29858079 -59646474 + AluSg/x SINE Alu 134 303 -9 1342 167 87 47 chr17 29858085 29858384 -59646169 + AluJb SINE Alu 1 311 -1 294 268 0 0 chr17 29858420 29858491 -59646062 - MER2 DNA MER2_type -3 342 272 848 175 7 0 chr17 29858491 29858628 -59645925 + AluJo SINE Alu 1 138 -174 2277 102 16 0 chr17 29858628 29858932 -59645621 + AluSx SINE Alu 2 310 -2 2089 129 0 22 chr17 29858998 29859315 -59645238 + AluSg SINE Alu 1 310 0 2490 74 0 0 chr17 29859318 29859629 -59644924 + AluY SINE Alu 1 309 -2 346 225 56 0 chr17 29859680 29859751 -59644802 + AluJ/FLAM SINE Alu 3 77 -225 272 200 0 55 chr17 29859751 29859806 -59644747 + L2 LINE L2 3221 3272 0 230 323 91 0 chr17 29859829 29859928 -59644625 - MLT1L LTR MaLR -221 394 287 388 292 83 7 chr17 29859933 29860077 -59644476 - MLT1K LTR MaLR -356 232 78 2023 101 10 0 chr17 29860166 29860454 -59644099 + AluSg SINE Alu 3 293 -17 2515 64 0 0 chr17 29860603 29860914 -59643639 - AluY SINE Alu 0 311 1 2023 120 20 3 chr17 29861701 29862002 -59642551 + AluSx SINE Alu 1 306 -6 946 161 0 42 chr17 29862002 29862170 -59642383 + AluJb SINE Alu 134 294 -18 253 284 20 49 chr17 29862172 29862274 -59642279 + L2 LINE L2 2380 2478 -836 227 274 18 26 chr17 29862278 29862391 -59642162 + L1ME3A LINE L1 6043 6154 -16 354 150 0 0 chr17 29862441 29862501 -59642052 - Alu SINE Alu 0 302 243 2179 86 31 66 chr17 29862534 29862884 -59641669 - LTR12 LTR ERV1 0 714 377 392 252 35 0 chr17 29862884 29862999 -59641554 - LTR30 LTR ERV1 -79 643 525 2768 209 89 10 chr17 29863002 29863227 -59641326 - L1ME3A LINE L1 -15 6155 5949 2162 109 0 7 chr17 29863227 29863529 -59641024 - AluSx SINE Alu -9 303 4 1317 182 66 42 chr17 29863533 29863819 -59640734 - AluJb SINE Alu -19 293 1 2768 209 89 10 chr17 29863819 29864297 -59640256 - L1ME3A LINE L1 -223 5947 5391 1043 276 40 21 chr17 29864299 29864849 -59639704 - MLT1G1 LTR MaLR 0 555 1 259 226 62 110 chr17 29864874 29865020 -59639533 - L1ME3A LINE L1 -813 5333 5195 994 164 24 0 chr17 29865020 29865185 -59639368 - AluJo/FRAM SINE Alu -10 302 134 2132 99 3 3 chr17 29865185 29865478 -59639075 - AluSq SINE Alu -20 293 1 652 214 73 66 chr17 29865489 29865695 -59638858 - L1ME3A LINE L1 -990 5156 4946 1846 123 45 14 chr17 29865695 29865852 -59638701 - AluSg SINE Alu -9 301 129 2286 89 0 3 chr17 29865852 29866155 -59638398 - AluY SINE Alu -9 302 1 1846 123 45 14 chr17 29866155 29866289 -59638264 - AluSg SINE Alu -181 129 1 652 214 73 66 chr17 29866289 29866371 -59638182 - L1ME3A LINE L1 -1200 4946 4866 839 259 161 14 chr17 29866378 29866905 -59637648 + L2 LINE L2 2696 3311 -2 362 376 0 0 chr17 29866891 29867016 -59637537 - MIR SINE MIR -120 142 18 * 900 152 0 0 chr17 29867102 29867234 -59637319 - FLAM_A SINE Alu -1 132 1 198 296 70 56 chr17 29869728 29869870 -59634683 - MIR SINE MIR -29 233 90 235 291 154 9 chr17 29873519 29873629 -59630924 + L2 LINE L2 3188 3313 0 272 188 14 0 chr17 29875130 29875199 -59629354 + GA-rich Low_complexity Low_complexity 1 70 0 186 205 0 0 chr17 29876469 29876508 -59628045 + L2 LINE L2 3017 3055 -217 184 304 53 53 chr17 29877285 29877456 -59627097 - L2 LINE L2 -51 3262 3092 1974 128 3 7 chr17 29877474 29877771 -59626782 - AluSq SINE Alu -17 296 1 2250 109 0 0 chr17 29877774 29878077 -59626476 - AluSg SINE Alu -7 303 1 2502 50 0 0 chr17 29878526 29878824 -59625729 - AluY SINE Alu -12 299 2 1851 135 0 58 chr17 29878995 29879320 -59625233 - AluJb SINE Alu -6 306 1 208 226 161 0 chr17 29879585 29879647 -59624906 - L2 LINE L2 -650 2664 2593 772 183 122 61 chr17 29879673 29879870 -59624683 + MER3 DNA MER1_type 1 209 0 1976 78 67 0 chr17 29880494 29880778 -59623775 - AluY SINE Alu -8 303 1 2026 140 0 0 chr17 29880790 29881090 -59623463 - AluSx SINE Alu -12 300 1 323 264 57 14 chr17 29883442 29883582 -59620971 + MIR SINE MIR 29 174 -88 240 378 0 0 chr17 29883939 29884029 -59620524 + MIR SINE MIR 30 119 -89 699 127 8 17 chr17 29884510 29884628 -59619925 + FLAM_A SINE Alu 26 142 0 211 359 13 13 chr17 29884863 29884941 -59619612 - L2 LINE L2 -6 3307 3230 1235 229 110 27 chr17 29885100 29885275 -59619278 + L2 LINE L2 2757 2916 -397 1882 120 3 45 chr17 29885275 29885465 -59619088 - AluSx SINE Alu -16 296 122 2349 78 7 0 chr17 29885465 29885773 -59618780 - AluSg SINE Alu 0 310 1 1882 120 3 45 chr17 29885773 29885891 -59618662 - AluSx SINE Alu -190 122 1 1235 229 110 27 chr17 29885891 29886232 -59618321 + L2 LINE L2 2916 3309 -4 687 214 24 36 chr17 29887314 29887482 -59617071 + MIR SINE MIR 45 210 -52 335 324 106 26 chr17 29887505 29888014 -59616539 + L2 LINE L2 2556 3111 -161 621 59 10 30 chr17 29889210 29889311 -59615242 + (TTCC)n Simple_repeat Simple_repeat 1 99 0 2054 139 3 0 chr17 29889316 29889626 -59614927 - AluSq SINE Alu -2 311 1 200 298 67 48 chr17 29890039 29890143 -59614410 - L2 LINE L2 -22 3250 3145 193 319 148 0 chr17 29890467 29890602 -59613951 - MIR3 SINE MIR -33 175 21 1614 146 34 17 chr17 29893733 29894027 -59610526 - AluJb SINE Alu -13 299 1 498 226 0 151 chr17 29894626 29894838 -59609715 - MER5A DNA MER1_type 0 189 10 1911 149 0 0 chr17 29894988 29895298 -59609255 - AluJb SINE Alu 0 310 1 425 341 16 4 chr17 29897580 29897742 -59606811 + MIR3 SINE MIR 3 165 -68 2395 54 7 0 chr17 29899798 29900094 -59604459 + AluY SINE Alu 1 298 -13 2257 75 0 7 chr17 29900620 29900912 -59603641 + AluSp SINE Alu 3 292 -21 1878 161 0 0 chr17 29901234 29901545 -59603008 + AluY SINE Alu 1 311 0 193 313 0 0 chr17 29901547 29901595 -59602958 + MIR SINE MIR 209 256 -6 553 304 91 60 chr17 29901715 29902431 -59602122 - L2 LINE L2 0 3272 2165 2204 96 0 3 chr17 29903046 29903339 -59601214 - AluSq SINE Alu -21 292 1 188 235 0 59 chr17 29904015 29904066 -59600487 + MIR SINE MIR 106 153 -109 1982 96 0 27 chr17 29906299 29906623 -59597930 + AluSx SINE Alu 6 312 0 2240 91 0 0 chr17 29907418 29907704 -59596849 - AluSc SINE Alu -23 286 1 2202 90 0 34 chr17 29907705 29908027 -59596526 - AluY SINE Alu 0 311 1 1309 178 82 32 chr17 29908029 29908310 -59596243 - AluJb SINE Alu -17 295 1 1192 187 4 26 chr17 29909007 29909237 -59595316 - AluJo SINE Alu -87 225 1 998 256 125 65 chr17 29909375 29909642 -59594911 + L1MC4a LINE L1 5566 5816 -1992 1420 157 138 8 chr17 29909642 29909903 -59594650 + AluJo SINE Alu 1 295 -17 998 256 125 65 chr17 29909903 29910186 -59594367 + L1MC4a LINE L1 5816 6149 -1659 2234 121 19 3 chr17 29910219 29910526 -59594027 + AluSx SINE Alu 1 312 0 2522 89 0 0 chr17 29911513 29911815 -59592738 + AluSx SINE Alu 1 302 -10 293 324 44 15 chr17 29911980 29912116 -59592437 + MIR3 SINE MIR 6 145 -63 294 291 93 55 chr17 29912460 29912697 -59591856 + MIR3 SINE MIR 7 252 -10 1075 245 114 44 chr17 29914400 29914673 -59589880 + MLT1H1 LTR MaLR 1 254 -301 2211 142 0 0 chr17 29914673 29914969 -59589584 + AluSx SINE Alu 1 296 -16 1075 245 114 44 chr17 29914969 29915214 -59589339 + MLT1H1 LTR MaLR 254 555 0 1652 130 27 0 chr17 29915399 29915660 -59588893 + AluSq SINE Alu 56 322 0 2143 100 0 0 chr17 29915660 29915930 -59588623 + AluSg SINE Alu 1 270 -40 366 146 16 0 chr17 29916030 29916104 -59588449 - AluS SINE Alu -242 61 1 217 327 58 45 chr17 29916662 29916818 -59587735 + L2 LINE L2 2896 3053 -219 258 324 14 0 chr17 29916892 29916963 -59587590 + L2 LINE L2 3186 3257 -15 1949 146 36 3 chr17 29917334 29917635 -59586918 + AluJb SINE Alu 1 311 -1 2453 83 0 3 chr17 29917803 29918103 -59586450 - AluSx SINE Alu -13 299 1 2239 120 0 0 chr17 29918128 29918428 -59586125 - AluSx SINE Alu -12 300 1 1963 154 0 7 chr17 29918681 29918980 -59585573 - AluJb SINE Alu -15 297 1 2154 129 14 0 chr17 29919210 29919505 -59585048 + AluSx SINE Alu 1 299 -13 341 283 253 6 chr17 29919873 29920039 -59584514 - MIR SINE MIR -50 212 6 1794 177 10 0 chr17 29920314 29920602 -59583951 + AluJb SINE Alu 1 291 -21 212 311 66 0 chr17 29920630 29920691 -59583862 - L2 LINE L2 0 3313 3249 2190 109 33 10 chr17 29921142 29921446 -59583107 - AluSx SINE Alu 0 312 2 2148 121 0 0 chr17 29921803 29922118 -59582435 - AluSx SINE Alu 0 315 1 202 273 0 30 chr17 29922857 29922923 -59581630 + GA-rich Low_complexity Low_complexity 2 65 0 29 0 0 0 chr17 29923668 29923697 -59580856 + AT_rich Low_complexity Low_complexity 1 29 0 2311 108 3 0 chr17 29924778 29925074 -59579479 - AluSg SINE Alu -13 297 1 2103 100 28 14 chr17 29928164 29928453 -59576100 - AluSq SINE Alu -20 293 1 1525 158 4 23 chr17 29928821 29929080 -59575473 + AluJo SINE Alu 43 296 -16 2318 104 0 0 chr17 29929082 29929406 -59575147 + AluSg SINE Alu 1 324 0 2174 166 51 28 chr17 29929413 29929899 -59574654 + L1MB8 LINE L1 5190 5691 -493 2157 135 3 0 chr17 29929899 29930229 -59574324 + AluSq SINE Alu 6 313 0 2174 166 51 28 chr17 29930229 29930287 -59574266 + L1MB8 LINE L1 5691 5746 -438 563 151 40 16 chr17 29930387 29930513 -59574040 + L1MB8 LINE L1 5748 5876 -302 847 145 0 0 chr17 29931191 29931315 -59573238 + AluSg/x SINE Alu 181 304 -6 186 43 0 0 chr17 29931354 29931377 -59573176 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1068 185 162 8 chr17 29931637 29931896 -59572657 + AluJo SINE Alu 1 299 -3 2307 91 14 7 chr17 29932498 29932795 -59571758 + AluSg SINE Alu 1 299 -11 736 154 0 37 chr17 29933347 29933483 -59571070 - FLAM_C SINE Alu -1 132 2 411 258 148 19 chr17 29938143 29938298 -59566255 - MIR3 SINE MIR -4 204 30 1577 183 14 11 chr17 29939876 29940155 -59564398 + AluJb SINE Alu 27 306 -6 234 0 0 0 chr17 29940267 29940293 -59564260 + (T)n Simple_repeat Simple_repeat 1 26 0 189 0 0 0 chr17 29941575 29941596 -59562957 + (CGGGGG)n Simple_repeat Simple_repeat 3 23 0 364 252 108 7 chr17 29943196 29943335 -59561218 - MIR SINE MIR -87 175 23 1956 143 33 0 chr17 29943929 29944230 -59560323 + AluSx SINE Alu 1 311 -1 192 272 148 0 chr17 29944245 29944326 -59560227 - L3b LINE CR1 -221 1362 1270 309 318 0 0 chr17 29945508 29945596 -59558957 + L2 LINE L2 3185 3272 0 189 255 39 0 chr17 29946659 29946710 -59557843 + MIR SINE MIR 64 116 -92 365 321 109 36 chr17 29947418 29947890 -59556663 + L2 LINE L2 2709 3218 -54 2370 96 0 7 chr17 29947920 29948223 -59556330 + AluSx SINE Alu 1 301 -11 2549 70 0 0 chr17 29948266 29948568 -59555985 + AluY SINE Alu 1 302 -9 242 352 137 20 chr17 29948893 29949251 -59555302 + L2 LINE L2 2870 3269 -3 212 340 90 21 chr17 29950053 29950241 -59554312 + L2 LINE L2 3110 3310 -3 374 244 83 18 chr17 29950748 29950915 -59553638 + MIR SINE MIR 3 191 -62 2346 78 7 0 chr17 29951189 29951482 -59553071 + AluSp SINE Alu 1 295 -18 2382 90 0 10 chr17 29951483 29951794 -59552759 + AluSq SINE Alu 1 308 -5 1535 180 11 11 chr17 29951814 29952081 -59552472 + AluJo SINE Alu 45 311 -1 2101 103 0 14 chr17 29952272 29952553 -59552000 + AluSx SINE Alu 3 279 -33 298 0 48 0 chr17 29952560 29952602 -59551951 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 2106 103 17 31 chr17 29952612 29952904 -59551649 + AluSg SINE Alu 1 288 -22 590 286 65 5 chr17 29953354 29953571 -59550982 + MIR SINE MIR 2 231 -31 238 259 156 22 chr17 29953702 29953837 -59550716 - MIR SINE MIR -98 164 12 197 294 69 25 chr17 29954029 29954161 -59550392 - MIR SINE MIR -5 257 120 498 291 132 6 chr17 29955401 29955583 -59548970 - MIR SINE MIR -38 224 20 403 303 90 7 chr17 29955755 29955900 -59548653 + L2 LINE L2 3116 3272 0 237 296 34 11 chr17 29956557 29956645 -59547908 - MIR SINE MIR -86 122 33 219 202 11 124 chr17 29956674 29956763 -59547790 + MIR3 SINE MIR 104 182 -26 334 332 115 70 chr17 29956897 29957280 -59547273 + L2 LINE L2 2422 2821 -493 292 290 137 46 chr17 29957504 29957635 -59546918 + MIR3 SINE MIR 2 144 -64 442 226 15 0 chr17 29957650 29957723 -59546830 + MER5A DNA MER1_type 4 81 -108 2531 82 0 0 chr17 29957723 29958027 -59546526 + AluSp SINE Alu 1 304 -9 442 226 15 0 chr17 29958027 29958060 -59546493 + MER5A DNA MER1_type 81 112 -77 350 278 120 0 chr17 29959010 29959118 -59545435 + L3 LINE CR1 1455 1575 -2 301 253 81 10 chr17 29959515 29959646 -59544907 - MIR SINE MIR -44 218 75 350 326 26 47 chr17 29960913 29961107 -59543446 - MIR SINE MIR -56 206 19 634 270 98 0 chr17 29961294 29961498 -59543055 + MIR SINE MIR 20 243 -19 380 358 40 6 chr17 29961771 29961947 -59542606 - MIR3 SINE MIR -26 182 1 519 254 179 46 chr17 29963247 29963487 -59541066 + L2 LINE L2 2997 3268 -4 222 295 0 0 chr17 29963508 29963569 -59540984 + MIR SINE MIR 75 135 -73 355 318 182 41 chr17 29964783 29965534 -59539019 - L2 LINE L2 -100 3172 2302 236 405 16 8 chr17 29965621 29965747 -59538806 + L2 LINE L2 3132 3258 -14 195 42 0 0 chr17 29965748 29965772 -59538781 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 405 0 0 0 chr17 29966294 29966339 -59538214 + (TG)n Simple_repeat Simple_repeat 1 45 0 1007 76 8 0 chr17 29966428 29966559 -59537994 - AluY SINE Alu -179 132 1 342 289 26 77 chr17 29966560 29966607 -59537946 - MIR SINE MIR -55 207 159 2222 111 3 9 chr17 29966607 29966785 -59537768 - AluSq SINE Alu 0 313 136 2258 75 7 3 chr17 29966785 29967080 -59537473 - AluY SINE Alu -15 296 1 2222 111 3 9 chr17 29967080 29967216 -59537337 - AluSq SINE Alu -177 136 1 342 289 26 77 chr17 29967216 29967313 -59537240 - MIR SINE MIR -103 159 73 2157 115 0 0 chr17 29967313 29967608 -59536945 - AluSx SINE Alu -17 295 1 342 289 26 77 chr17 29967608 29967656 -59536897 - MIR SINE MIR -189 73 24 285 98 0 0 chr17 29967797 29967838 -59536715 + (TGG)n Simple_repeat Simple_repeat 3 43 0 448 282 53 0 chr17 29968638 29968808 -59535745 - MER117 DNA MER1_type -17 180 2 339 238 129 10 chr17 29968823 29968924 -59535629 - MIR SINE MIR -62 146 34 1604 145 25 63 chr17 29969061 29969378 -59535175 - AluJb SINE Alu -7 305 1 511 238 28 28 chr17 29969482 29969625 -59534928 + MIR SINE MIR 3 145 -117 384 268 30 30 chr17 29969769 29969937 -59534616 - MER117 DNA MER1_type -29 168 1 380 87 43 14 chr17 29971471 29971540 -59533013 - MADE1 DNA Mariner -1 79 9 288 256 47 39 chr17 29971550 29971679 -59532874 - L1ME LINE L1 -460 5661 5532 360 0 0 0 chr17 29972426 29972466 -59532087 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 57 0 0 chr17 29972996 29973031 -59531522 + GC_rich Low_complexity Low_complexity 1 35 0 1920 146 0 3 chr17 29973294 29973595 -59530958 - AluSc SINE Alu -9 300 1 1122 44 0 7 chr17 29973595 29973730 -59530823 - AluY SINE Alu -177 134 1 1967 123 3 3 chr17 29973893 29974194 -59530359 - AluY SINE Alu -10 301 1 2007 115 0 3 chr17 29974370 29974656 -59529897 - AluSc SINE Alu -24 285 1 1146 37 0 7 chr17 29974656 29974791 -59529762 - AluY SINE Alu -177 134 1 2328 73 3 3 chr17 29974954 29975255 -59529298 - AluY SINE Alu -10 301 1 342 220 0 0 chr17 29975331 29975431 -59529122 + (TG)n Simple_repeat Simple_repeat 1 100 0 180 362 19 38 chr17 29975555 29975660 -59528893 - MIR3 SINE MIR -45 163 61 817 83 33 16 chr17 29976085 29976206 -59528347 - Alu SINE Alu -10 300 178 295 172 16 16 chr17 29976345 29976409 -59528144 - MER117 DNA MER1_type -133 64 1 380 323 99 37 chr17 29977826 29978040 -59526513 - MIR SINE MIR -37 225 3 209 295 77 0 chr17 29978086 29978164 -59526389 - MIR SINE MIR -72 136 53 412 231 58 10 chr17 29978322 29978426 -59526127 + MIR SINE MIR 36 144 -118 345 317 24 0 chr17 29979374 29979499 -59525054 - MIR SINE MIR -61 147 38 310 245 57 28 chr17 29979593 29979699 -59524854 + MIR SINE MIR 38 146 -62 298 264 38 28 chr17 29980431 29980537 -59524016 - MIR SINE MIR -61 147 41 553 298 76 18 chr17 29980579 29980804 -59523749 - MIR SINE MIR -12 250 13 212 319 50 21 chr17 29980997 29981138 -59523415 + L2 LINE L2 2911 3055 -217 283 227 173 0 chr17 29981656 29981766 -59522787 - MIR3 SINE MIR -22 186 58 231 297 68 0 chr17 29981836 29981910 -59522643 - L3 LINE CR1 -113 1464 1386 242 376 194 0 chr17 29981953 29982123 -59522430 + MIR3 SINE MIR 3 205 -3 496 277 138 20 chr17 29982164 29982359 -59522194 - MIR SINE MIR -14 248 31 23 33 0 0 chr17 29982391 29982421 -59522132 + AT_rich Low_complexity Low_complexity 1 30 0 1646 106 8 4 chr17 29982460 29982671 -59521882 + LTR8A LTR ERV1 1 215 -512 2053 128 0 31 chr17 29982671 29982992 -59521561 + AluSq SINE Alu 1 311 -2 1646 106 8 4 chr17 29982992 29983045 -59521508 + LTR8A LTR ERV1 215 266 -461 850 125 0 0 chr17 29983147 29983267 -59521286 + AluSg/x SINE Alu 182 301 -9 249 315 33 22 chr17 29983287 29983379 -59521174 - MIR SINE MIR -76 132 40 216 243 0 0 chr17 29985124 29985198 -59519355 + (CA)n Simple_repeat Simple_repeat 2 75 0 357 330 99 19 chr17 29985232 29985444 -59519109 + MIR SINE MIR 27 255 -7 318 148 0 0 chr17 29985980 29986034 -59518519 - MER3 DNA MER1_type -1 208 155 2336 71 0 3 chr17 29986034 29986331 -59518222 + AluSx SINE Alu 1 296 -16 2066 118 11 0 chr17 29986335 29986622 -59517931 + AluSx SINE Alu 1 290 -22 23 0 0 0 chr17 29986622 29986645 -59517908 + AT_rich Low_complexity Low_complexity 1 23 0 287 282 136 0 chr17 29988357 29988460 -59516093 - MIR3 SINE MIR -78 130 14 285 98 0 0 chr17 29988648 29988689 -59515864 + (GGGA)n Simple_repeat Simple_repeat 1 41 0 187 79 53 0 chr17 29989661 29989699 -59514854 + (TGGA)n Simple_repeat Simple_repeat 1 40 0 477 286 23 0 chr17 29990603 29990736 -59513817 + MIR SINE MIR 127 262 0 424 287 112 7 chr17 29990872 29991015 -59513538 + MIR SINE MIR 64 221 -41 259 211 113 14 chr17 29991462 29991533 -59513020 - L2 LINE L2 0 3313 3236 292 339 46 8 chr17 29992092 29992222 -59512331 - L2 LINE L2 -237 3035 2901 209 246 35 0 chr17 29993546 29993603 -59510950 - MIR SINE MIR -82 126 68 360 0 0 0 chr17 29995652 29995692 -59508861 + (TG)n Simple_repeat Simple_repeat 2 41 0 29 70 0 0 chr17 29996222 29996279 -59508274 + GC_rich Low_complexity Low_complexity 1 57 0 218 167 0 0 chr17 29996553 29996589 -59507964 + (CCG)n Simple_repeat Simple_repeat 2 37 0 182 36 0 36 chr17 29997413 29997441 -59507112 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1608 150 40 25 chr17 29997443 29997717 -59506836 - AluJo SINE Alu -30 282 5 515 296 117 0 chr17 29999254 29999416 -59505137 + L2 LINE L2 3090 3270 -2 22 0 0 0 chr17 29999568 29999590 -59504963 + AT_rich Low_complexity Low_complexity 1 22 0 1776 181 0 0 chr17 29999590 29999877 -59504676 - AluJb SINE Alu -25 287 1 211 324 203 0 chr17 30002430 30002578 -59501975 - L2 LINE L2 -267 3005 2828 200 306 0 56 chr17 30002701 30002773 -59501780 - L2 LINE L2 0 3313 3246 2246 114 7 0 chr17 30003629 30003935 -59500618 + AluSx SINE Alu 1 308 -4 290 269 269 2 chr17 30003957 30004136 -59500417 + MIR SINE MIR 24 241 -21 643 265 67 49 chr17 30004268 30004491 -59500062 + MIR SINE MIR 5 231 -31 181 349 0 0 chr17 30004741 30004804 -59499749 + MIR SINE MIR 190 252 -10 969 204 122 13 chr17 30004837 30005067 -59499486 - MIR SINE MIR -1 261 7 186 325 57 24 chr17 30005903 30006026 -59498527 - L3 LINE CR1 -38 1539 1413 * 204 286 162 9 chr17 30006025 30006130 -59498423 + L2 LINE L2 3191 3311 -2 1268 148 0 30 chr17 30006324 30006511 -59498042 - AluJb SINE Alu 0 317 136 2330 79 0 0 chr17 30006511 30006814 -59497739 - AluY SINE Alu -8 303 1 1268 148 0 30 chr17 30006814 30006862 -59497691 - AluJb SINE Alu -181 136 88 181 271 51 0 chr17 30006862 30006921 -59497632 - MIR SINE MIR -73 135 74 793 312 17 8 chr17 30007821 30008058 -59496495 - MIR SINE MIR -12 250 12 314 340 122 0 chr17 30008568 30008715 -59495838 + MIR SINE MIR 90 254 -8 2172 100 17 0 chr17 30008821 30009110 -59495443 - AluSg SINE Alu -16 294 1 238 326 42 0 chr17 30009687 30009782 -59494771 - MIR SINE MIR -133 129 31 424 336 40 7 chr17 30009873 30010022 -59494531 + L3b LINE CR1 1306 1459 -124 232 262 87 24 chr17 30010123 30010249 -59494304 - HAL1 LINE L1 -1 2506 2373 542 240 0 11 chr17 30010270 30010423 -59494130 - L1MC4a LINE L1 -1843 5965 5816 561 237 59 89 chr17 30011553 30011789 -59492764 + MER102b DNA MER1_type 111 339 -2 195 114 29 0 chr17 30011812 30011847 -59492706 - MIR SINE MIR -125 137 102 258 176 0 0 chr17 30011879 30011930 -59492623 + T-rich Low_complexity Low_complexity 1 51 0 256 114 0 45 chr17 30013072 30013116 -59491437 - MIR SINE MIR -61 147 106 25 0 0 0 chr17 30013624 30013649 -59490904 + AT_rich Low_complexity Low_complexity 1 25 0 234 238 35 91 chr17 30013810 30013953 -59490600 - L1ME4a LINE L1 -46 6075 5941 406 87 43 14 chr17 30014280 30014349 -59490204 - MADE1 DNA Mariner -1 79 9 333 237 79 40 chr17 30014359 30014511 -59490042 - L1MC4a LINE L1 -460 5661 5504 2508 69 0 10 chr17 30015748 30016051 -59488502 + AluY SINE Alu 1 300 -11 498 221 14 21 chr17 30016288 30016471 -59488082 + MIR SINE MIR 14 241 -21 634 233 8 0 chr17 30016836 30016965 -59487588 - FLAM_A SINE Alu -2 131 2 647 94 0 72 chr17 30016972 30017031 -59487522 - L1MA7 LINE L1 0 6291 6229 1755 152 30 26 chr17 30017031 30017333 -59487220 - AluJo SINE Alu -9 303 1 647 94 0 72 chr17 30017333 30017411 -59487142 - L1MA7 LINE L1 -62 6229 6164 405 175 8 108 chr17 30017411 30017463 -59487090 + L1MA9 LINE L1 5925 5960 -352 2194 96 21 7 chr17 30017463 30017754 -59486799 + AluSq SINE Alu 1 295 -18 405 175 8 108 chr17 30017754 30017821 -59486732 + L1MA9 LINE L1 5960 6032 -280 369 0 0 0 chr17 30018766 30018807 -59485746 + (CA)n Simple_repeat Simple_repeat 2 42 0 1701 129 85 11 chr17 30019543 30019814 -59484739 - AluJb SINE Alu -21 291 1 1683 127 49 102 chr17 30019860 30020239 -59484314 - L1MB3 LINE L1 0 6183 5830 1593 113 32 0 chr17 30020239 30020460 -59484093 - AluJb SINE Alu 0 312 85 1683 127 49 102 chr17 30020460 30020530 -59484023 - L1MB3 LINE L1 -353 5830 5758 2484 60 3 0 chr17 30020549 30020847 -59483706 - AluY SINE Alu -12 299 1 362 285 59 38 chr17 30021104 30021290 -59483263 - MARNA DNA Mariner -353 233 44 802 130 0 0 chr17 30021651 30021766 -59482787 - AluSp/q SINE Alu -14 299 185 1758 89 0 13 chr17 30021766 30021991 -59482562 - AluSq SINE Alu -91 222 1 2247 132 0 7 chr17 30022003 30022313 -59482240 - AluSx SINE Alu -4 308 1 324 205 0 64 chr17 30023106 30023184 -59481369 + MIR SINE MIR 120 192 -70 743 212 53 0 chr17 30024501 30024652 -59479901 - MLT1H1 LTR MaLR -53 502 344 498 148 0 11 chr17 30024652 30024740 -59479813 - FLAM SINE Alu -19 124 38 495 244 222 60 chr17 30024790 30024865 -59479688 - MLT1H1 LTR MaLR -281 274 213 2272 105 0 3 chr17 30024865 30025161 -59479392 + AluSg SINE Alu 1 295 -15 495 244 222 60 chr17 30025161 30025319 -59479234 - MLT1H1 LTR MaLR -342 213 3 1731 163 10 38 chr17 30025343 30025656 -59478897 + AluJb SINE Alu 1 304 -8 499 279 13 19 chr17 30025703 30025861 -59478692 + MER69A DNA AcHobo 1 157 -20 26 0 0 0 chr17 30027214 30027240 -59477313 + AT_rich Low_complexity Low_complexity 1 26 0 289 318 0 0 chr17 30027629 30027714 -59476839 + MIR3 SINE MIR 118 202 -6 1314 189 25 13 chr17 30027885 30028123 -59476430 - AluJo SINE Alu -19 293 53 267 313 94 43 chr17 30028867 30029196 -59475357 + L1MEd LINE L1 49 394 -5725 588 308 111 39 chr17 30029197 30029888 -59474665 + L1MEd LINE L1 512 1252 -4867 742 189 0 0 chr17 30030199 30030397 -59474156 - FLAM_A SINE Alu 0 208 11 232 170 43 0 chr17 30031910 30031957 -59472596 + L1P3 LINE L1 5774 5822 -350 570 307 28 20 chr17 30032480 30032731 -59471822 - L2 LINE L2 -469 2845 2593 183 273 158 29 chr17 30033587 30033726 -59470827 + L3b LINE CR1 1295 1451 -132 362 268 238 12 chr17 30034324 30034488 -59470065 + MIR SINE MIR 29 229 -33 547 254 103 16 chr17 30034703 30034888 -59469665 + MIR SINE MIR 26 226 -36 2177 93 0 28 chr17 30034944 30035267 -59469286 + AluSx SINE Alu 1 315 0 1476 195 52 24 chr17 30035407 30035735 -59468818 - MER58B DNA MER1_type -1 340 4 209 360 128 24 chr17 30035741 30035905 -59468648 - L3b LINE CR1 -24 1559 1379 206 351 213 13 chr17 30035987 30036212 -59468341 - L3b LINE CR1 -202 1381 1112 203 146 24 0 chr17 30038064 30038105 -59466448 + GA-rich Low_complexity Low_complexity 3 44 0 659 185 15 22 chr17 30038353 30038488 -59466065 + AluJo SINE Alu 2 135 -177 1503 167 56 42 chr17 30038489 30038795 -59465758 + AluJo SINE Alu 2 311 -1 1841 131 69 0 chr17 30038799 30039074 -59465479 + AluSg SINE Alu 1 294 -16 375 208 69 20 chr17 30039739 30039867 -59464686 - MER20B DNA MER1_type -65 154 28 279 261 43 0 chr17 30039922 30040014 -59464539 - MIR SINE MIR -69 139 44 1618 195 0 42 chr17 30040499 30040812 -59463741 - AluJb SINE Alu -12 300 1 737 225 38 80 chr17 30041561 30041732 -59462821 + MIR SINE MIR 12 189 -73 528 101 13 0 chr17 30041732 30041811 -59462742 - MADE1 DNA Mariner 0 80 1 737 225 38 80 chr17 30041811 30041838 -59462715 + MIR SINE MIR 189 216 -46 1885 162 0 7 chr17 30041838 30042149 -59462404 + AluJb SINE Alu 1 309 0 737 225 38 80 chr17 30042149 30042210 -59462343 + MIR SINE MIR 216 262 0 2357 111 3 0 chr17 30044641 30044947 -59459606 + AluSq SINE Alu 1 307 -6 2295 110 0 0 chr17 30045908 30046207 -59458346 + AluSx SINE Alu 1 299 -13 251 272 24 64 chr17 30046246 30046371 -59458182 + MIR SINE MIR 82 201 -61 813 210 42 115 chr17 30046373 30046482 -59458071 - L2 LINE L2 0 3313 3198 3067 136 14 66 chr17 30046482 30046741 -59457812 + L1MB2 LINE L1 5572 5843 -328 1638 130 0 21 chr17 30046741 30046878 -59457675 + AluSx SINE Alu 1 132 -180 2442 87 3 0 chr17 30046878 30047176 -59457377 + AluSc SINE Alu 1 299 -10 1638 130 0 21 chr17 30047176 30047277 -59457276 + AluSx SINE Alu 132 234 -78 3067 136 14 66 chr17 30047277 30047299 -59457254 + L1MB2 LINE L1 5843 5865 -306 314 0 49 0 chr17 30047299 30047340 -59457213 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 3067 136 14 66 chr17 30047340 30047690 -59456863 + L1MB2 LINE L1 5865 6171 0 2241 97 0 42 chr17 30047695 30048003 -59456550 - AluSx SINE Alu -17 295 1 813 210 42 115 chr17 30048003 30048244 -59456309 - L2 LINE L2 -119 3194 2983 230 336 81 20 chr17 30049680 30049829 -59454724 + L3b LINE CR1 1331 1488 -95 615 190 15 29 chr17 30050961 30051098 -59453455 + MER5B DNA MER1_type 7 141 -37 307 161 16 140 chr17 30051098 30051284 -59453269 + L1MC5 LINE L1 7549 7711 -250 840 223 0 18 chr17 30051285 30051451 -59453102 + FRAM SINE Alu 1 163 -13 2170 110 0 7 chr17 30051454 30051745 -59452808 + AluSc SINE Alu 1 289 -20 246 62 0 0 chr17 30051750 30051782 -59452771 + (TTTCC)n Simple_repeat Simple_repeat 4 35 0 1290 162 143 33 chr17 30051785 30052057 -59452496 - AluJb SINE Alu 0 302 1 320 243 81 44 chr17 30052062 30052198 -59452355 + L1MC5 LINE L1 7703 7843 -118 27 22 0 22 chr17 30052198 30052227 -59452326 + AT_rich Low_complexity Low_complexity 1 30 -14 2292 91 0 14 chr17 30052227 30052524 -59452029 + AluSx SINE Alu 1 293 -19 27 22 0 22 chr17 30052524 30052539 -59452014 + AT_rich Low_complexity Low_complexity 30 44 0 450 193 0 11 chr17 30052539 30052627 -59451926 - FLAM_A SINE Alu -19 123 37 2277 91 53 14 chr17 30052665 30053026 -59451527 - THE1C LTR MaLR 0 375 1 189 0 0 0 chr17 30054518 30054539 -59450014 + (A)n Simple_repeat Simple_repeat 1 21 0 1660 112 31 31 chr17 30055599 30055765 -59448788 - AluSx SINE Alu -9 303 135 2589 43 0 10 chr17 30055765 30056066 -59448487 - AluY SINE Alu -13 298 1 1660 112 31 31 chr17 30056066 30056159 -59448394 - AluSx SINE Alu -176 136 44 247 287 40 40 chr17 30057075 30057176 -59447377 + MIR SINE MIR 162 262 0 2338 89 0 13 chr17 30057181 30057483 -59447070 - AluSq SINE Alu -15 298 1 306 219 27 0 chr17 30058117 30058190 -59446363 - MIR SINE MIR -111 151 77 271 340 94 0 chr17 30058347 30058559 -59445994 + L3b LINE CR1 1161 1392 -191 182 353 58 14 chr17 30059461 30059600 -59444953 + L2 LINE L2 2915 3059 -213 224 260 180 70 chr17 30059807 30059907 -59444646 + L2 LINE L2 3203 3313 0 207 0 0 0 chr17 30060142 30060165 -59444388 + (T)n Simple_repeat Simple_repeat 1 23 0 2100 129 3 10 chr17 30060183 30060477 -59444076 + AluSx SINE Alu 1 292 -20 279 183 37 0 chr17 30061013 30061095 -59443458 + GA-rich Low_complexity Low_complexity 2 86 0 363 342 106 12 chr17 30063075 30063236 -59441317 - MER5A DNA MER1_type 0 189 14 313 301 180 38 chr17 30064053 30064236 -59440317 - MIR SINE MIR -15 247 39 189 0 0 0 chr17 30064275 30064296 -59440257 + (A)n Simple_repeat Simple_repeat 1 21 0 2182 87 3 7 chr17 30065966 30066255 -59438298 - AluSx SINE Alu -24 288 1 602 358 25 12 chr17 30067204 30067447 -59437106 + MIR SINE MIR 13 258 -4 243 0 0 0 chr17 30071472 30071499 -59433054 + (CA)n Simple_repeat Simple_repeat 1 27 0 185 159 23 0 chr17 30072120 30072164 -59432389 + (TG)n Simple_repeat Simple_repeat 1 45 0 420 306 98 6 chr17 30075132 30075305 -59429248 + MIR SINE MIR 28 216 -46 182 372 77 0 chr17 30075676 30075754 -59428799 + MIR3 SINE MIR 119 202 -6 342 250 134 9 chr17 30075877 30075989 -59428564 + MIR SINE MIR 66 191 -71 2425 43 10 3 chr17 30075990 30076293 -59428260 - AluY SINE Alu -6 305 1 1968 150 0 25 chr17 30076701 30077015 -59427538 + AluJb SINE Alu 7 312 0 2010 72 47 11 chr17 30077106 30077385 -59427168 + AluSc SINE Alu 17 305 -4 238 368 0 28 chr17 30077387 30077531 -59427022 + GA-rich Low_complexity Low_complexity 3 142 0 190 339 0 0 chr17 30082416 30082475 -59422078 + L2 LINE L2 3214 3272 0 1832 149 10 10 chr17 30088937 30089239 -59415314 - AluJo SINE Alu -10 302 1 1975 148 0 3 chr17 30089245 30089548 -59415005 - AluSx SINE Alu -10 302 1 218 278 40 33 chr17 30090415 30090566 -59413987 + (CAGAGA)n Simple_repeat Simple_repeat 6 157 0 226 341 12 0 chr17 30091716 30091798 -59412755 - L2 LINE L2 -14 3258 3176 1076 360 163 22 chr17 30091882 30092840 -59411713 - L2 LINE L2 -249 3023 2202 2395 69 26 0 chr17 30092840 30093143 -59411410 + AluY SINE Alu 1 311 0 1076 360 163 22 chr17 30093143 30094190 -59410363 - L2 LINE L2 -1070 2202 739 180 310 14 42 chr17 30095357 30095428 -59409125 + L3 LINE CR1 1398 1466 -111 216 0 0 0 chr17 30095545 30095569 -59408984 + (A)n Simple_repeat Simple_repeat 1 24 0 2014 123 10 7 chr17 30095576 30095876 -59408677 + AluSx SINE Alu 1 301 -11 598 258 91 5 chr17 30095884 30096103 -59408450 + MIR SINE MIR 6 248 -14 440 264 72 30 chr17 30096369 30096536 -59408017 - MIR3 SINE MIR -4 204 31 644 112 28 0 chr17 30097144 30097251 -59407302 + MIR SINE MIR 29 138 -124 620 243 28 44 chr17 30098882 30099063 -59405490 + L2 LINE L2 3127 3304 -9 458 326 9 27 chr17 30100324 30100545 -59404008 - MER102b DNA MER1_type -12 329 113 511 325 64 29 chr17 30102108 30102479 -59402074 - L3 LINE CR1 -25 1552 1123 285 274 57 19 chr17 30106965 30107071 -59397482 + MIR SINE MIR 20 129 -133 299 273 52 0 chr17 30107196 30107273 -59397280 + L2 LINE L2 3171 3251 -21 2241 110 0 13 chr17 30107608 30107918 -59396635 - AluSx SINE Alu -6 306 1 1114 152 0 22 chr17 30107922 30108100 -59396453 - AluJb SINE Alu -7 305 132 2383 71 0 0 chr17 30111821 30112116 -59392437 + AluY SINE Alu 1 295 -16 236 188 0 21 chr17 30114350 30114398 -59390155 + G-rich Low_complexity Low_complexity 6 52 0 434 210 228 0 chr17 30115197 30115359 -59389194 + MER46C DNA MER2_type 13 211 -127 1906 156 6 16 chr17 30118069 30118383 -59386170 + AluJb SINE Alu 1 311 -1 266 254 0 15 chr17 30118407 30118474 -59386079 - MIR SINE MIR 0 262 197 24 0 0 0 chr17 30118482 30118506 -59386047 + AT_rich Low_complexity Low_complexity 1 24 0 486 0 0 0 chr17 30118529 30118583 -59385970 + (CA)n Simple_repeat Simple_repeat 1 54 0 306 180 0 0 chr17 30119348 30119409 -59385144 + (CA)n Simple_repeat Simple_repeat 2 62 0 1861 113 68 3 chr17 30122146 30122438 -59382115 - AluSx SINE Alu -1 311 1 376 268 107 0 chr17 30122442 30122554 -59381999 + MIR3 SINE MIR 81 204 -4 2210 85 0 0 chr17 30122575 30122878 -59381675 - AluSp SINE Alu 0 303 1 2193 88 0 23 chr17 30123149 30123457 -59381096 - AluY SINE Alu -10 301 1 873 121 0 104 chr17 30123879 30124001 -59380552 + L1MA1 LINE L1 6148 6281 -21 1859 151 0 10 chr17 30124001 30124306 -59380247 + AluJb SINE Alu 1 302 -10 222 37 0 0 chr17 30124306 30124333 -59380220 + (TA)n Simple_repeat Simple_repeat 2 28 0 873 121 0 104 chr17 30124333 30124382 -59380171 + L1MA1 LINE L1 6279 6302 0 549 272 60 65 chr17 30124555 30124787 -59379766 - MIR SINE MIR -9 253 23 367 266 243 12 chr17 30125048 30125217 -59379336 - MIR SINE MIR -7 255 48 391 323 30 73 chr17 30125540 30125772 -59378781 + L1ME LINE L1 5573 5773 -348 830 241 10 39 chr17 30126626 30126833 -59377720 - MIR SINE MIR -15 247 47 189 107 0 0 chr17 30128849 30128877 -59375676 + (CA)n Simple_repeat Simple_repeat 2 29 0 720 153 5 138 chr17 30129862 30129994 -59374559 - MER5B DNA MER1_type 0 178 81 2375 38 41 0 chr17 30129994 30130286 -59374267 - AluY SINE Alu -7 304 1 720 153 5 138 chr17 30130286 30130356 -59374197 - MER5B DNA MER1_type -97 81 3 204 40 0 0 chr17 30130405 30130430 -59374123 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 220 200 233 0 chr17 30130432 30130492 -59374061 + MIR SINE MIR 78 151 -111 957 202 34 0 chr17 30130552 30130730 -59373823 + MER5A DNA MER1_type 4 187 -2 680 250 38 59 chr17 30130749 30130865 -59373688 + MIR SINE MIR 1 111 -151 1768 144 7 3 chr17 30130865 30131163 -59373390 - AluSx SINE Alu -13 299 1 680 250 38 59 chr17 30131163 30131282 -59373271 + MIR SINE MIR 111 231 -31 1333 187 0 32 chr17 30131319 30131597 -59372956 - AluJo SINE Alu -43 269 1 513 351 61 9 chr17 30132534 30132765 -59371788 + MIR SINE MIR 20 262 0 23 0 0 0 chr17 30133049 30133072 -59371481 + AT_rich Low_complexity Low_complexity 1 23 0 272 274 44 35 chr17 30133593 30133706 -59370847 + L2 LINE L2 3165 3278 -35 2265 71 0 0 chr17 30134035 30134347 -59370206 + AluSx SINE Alu 4 315 0 642 294 231 17 chr17 30134480 30134952 -59369601 + MLT1K LTR MaLR 2 574 -14 341 286 95 12 chr17 30135035 30135203 -59369350 - MIR SINE MIR -69 193 12 1913 151 0 16 chr17 30135291 30135603 -59368950 + AluJb SINE Alu 1 307 -5 1473 150 75 38 chr17 30135676 30135969 -59368584 + AluJo SINE Alu 1 304 -8 217 221 253 0 chr17 30136229 30136324 -59368229 + L2 LINE L2 1692 1810 -1504 315 0 0 0 chr17 30136639 30136674 -59367879 + (TG)n Simple_repeat Simple_repeat 2 36 0 384 239 11 0 chr17 30137287 30137375 -59367178 + L2 LINE L2 3225 3313 0 299 311 28 0 chr17 30138027 30138133 -59366420 + L3b LINE CR1 1290 1398 -185 264 203 125 0 chr17 30138659 30138680 -59365873 + MER3 DNA MER1_type 19 47 -162 297 211 0 0 chr17 30138680 30138732 -59365821 - MER3 DNA MER1_type 0 209 158 396 209 0 0 chr17 30138735 30138802 -59365751 + AluJ/FLAM SINE Alu 1 67 -235 1025 122 117 46 chr17 30139100 30139297 -59365256 + AluJo SINE Alu 80 290 -22 1684 176 24 0 chr17 30140780 30141070 -59363483 - AluJo SINE Alu -15 297 1 1037 183 4 74 chr17 30141099 30141171 -59363382 - MIR SINE MIR -38 224 149 1721 146 9 72 chr17 30141171 30141492 -59363061 - AluJb SINE Alu -5 307 7 1037 183 4 74 chr17 30141492 30141648 -59362905 - MIR SINE MIR -113 149 12 261 139 0 0 chr17 30142157 30142200 -59362353 + (TG)n Simple_repeat Simple_repeat 1 43 0 259 314 126 35 chr17 30144713 30144968 -59359585 - L2 LINE L2 -84 3188 2911 222 321 25 0 chr17 30145307 30145388 -59359165 - L3b LINE CR1 -224 1359 1277 640 252 48 29 chr17 30145566 30145772 -59358781 + MIR SINE MIR 32 241 -21 1823 154 0 39 chr17 30145838 30146149 -59358404 - AluJb SINE Alu -13 299 1 319 55 41 27 chr17 30147515 30147588 -59356965 + (CAAAA)n Simple_repeat Simple_repeat 2 75 0 233 328 119 51 chr17 30148410 30148645 -59355908 + L2 LINE L2 3017 3267 -5 205 216 352 11 chr17 30148649 30148737 -59355816 - MIR SINE MIR -134 128 11 1707 121 69 17 chr17 30148991 30149128 -59355425 + AluJb SINE Alu 1 129 -183 2372 88 0 0 chr17 30149128 30149434 -59355119 + AluSq SINE Alu 1 306 -7 1707 121 69 17 chr17 30149434 30149585 -59354968 + AluJb SINE Alu 129 304 -8 379 334 128 14 chr17 30150157 30150510 -59354043 + L2 LINE L2 2556 2948 -366 243 309 173 0 chr17 30150688 30150798 -59353755 + L2 LINE L2 3182 3310 -3 2261 101 0 3 chr17 30151939 30152246 -59352307 - AluSp SINE Alu -7 306 1 214 321 0 0 chr17 30152314 30152370 -59352183 + L2 LINE L2 3212 3267 -5 481 258 120 0 chr17 30153030 30153197 -59351356 + L2 LINE L2 2684 2870 -444 180 176 0 0 chr17 30154918 30154952 -59349601 + CT-rich Low_complexity Low_complexity 1 34 0 495 246 22 7 chr17 30155167 30155305 -59349248 - MIR SINE MIR -15 247 108 1667 160 42 3 chr17 30155485 30155772 -59348781 + AluJo SINE Alu 1 298 -14 657 311 25 0 chr17 30155931 30156127 -59348426 - MIR SINE MIR -6 256 56 585 161 0 11 chr17 30156871 30156958 -59347595 + AluS SINE Alu 2 87 -225 1522 103 0 0 chr17 30156958 30157161 -59347392 + AluSx SINE Alu 16 218 -94 1942 62 0 4 chr17 30157161 30157405 -59347148 - AluY SINE Alu -68 243 1 336 248 262 14 chr17 30158053 30158194 -59346359 + MIR3 SINE MIR 19 194 -14 1048 186 148 57 chr17 30158882 30159223 -59345330 + L1ME2 LINE L1 5746 6124 -40 1904 88 42 18 chr17 30159223 30159508 -59345045 + AluSc SINE Alu 1 292 -17 1048 186 148 57 chr17 30159508 30159532 -59345021 + L1ME2 LINE L1 6124 6144 -20 1788 179 10 3 chr17 30159668 30159975 -59344578 + AluJb SINE Alu 1 309 -3 303 260 106 10 chr17 30160014 30160118 -59344435 + L1MC4 LINE L1 7928 8041 -1 2137 102 30 7 chr17 30160247 30160552 -59344001 + AluSx SINE Alu 1 312 0 526 242 74 13 chr17 30160563 30160712 -59343841 + MIR SINE MIR 78 235 -27 388 270 135 56 chr17 30160897 30161116 -59343437 + L1MC4a LINE L1 5326 5526 -969 510 45 0 148 chr17 30161116 30161154 -59343399 + MADE1 DNA Mariner 2 44 -36 2332 61 10 0 chr17 30161154 30161447 -59343106 - AluSp SINE Alu -17 296 1 2464 48 7 0 chr17 30161448 30161741 -59342812 - AluY SINE Alu -16 295 1 510 45 0 148 chr17 30161741 30161788 -59342765 + MADE1 DNA Mariner 43 76 -4 388 270 135 56 chr17 30161788 30161836 -59342717 + L1MC4a LINE L1 5526 5569 -926 1638 186 7 10 chr17 30161836 30162127 -59342426 - AluJo SINE Alu -21 291 2 388 270 135 56 chr17 30162127 30162279 -59342274 + L1MC4a LINE L1 5569 5708 -787 826 152 0 0 chr17 30162279 30162589 -59341964 + AluJo SINE Alu 1 310 0 2182 100 10 10 chr17 30162589 30162880 -59341673 + AluSx SINE Alu 2 292 -20 388 270 135 56 chr17 30162880 30163017 -59341536 + L1MC4a LINE L1 5707 5769 -726 23 33 0 0 chr17 30163160 30163190 -59341363 + AT_rich Low_complexity Low_complexity 1 30 0 760 171 17 0 chr17 30163190 30163307 -59341246 - AluSq/x SINE Alu -191 121 3 2032 145 10 6 chr17 30163408 30163719 -59340834 - AluJb SINE Alu 0 312 1 31 76 0 0 chr17 30163727 30163793 -59340760 + AT_rich Low_complexity Low_complexity 1 66 0 2388 62 0 3 chr17 30163833 30164121 -59340432 + AluSg1 SINE Alu 1 287 -22 21 36 0 0 chr17 30164891 30164919 -59339634 + GC_rich Low_complexity Low_complexity 1 28 0 218 325 0 25 chr17 30165091 30165171 -59339382 + MIR SINE MIR 61 138 -70 294 224 38 0 chr17 30165241 30165322 -59339231 + MIR SINE MIR 40 124 -84 202 137 0 59 chr17 30168266 30168317 -59336236 + (CCCG)n Simple_repeat Simple_repeat 2 49 0 207 288 87 135 chr17 30169586 30169827 -59334726 - L2 LINE L2 -4 3268 3042 2172 133 3 3 chr17 30169827 30170129 -59334424 + AluSx SINE Alu 1 302 -10 207 288 87 135 chr17 30170129 30170175 -59334378 - L2 LINE L2 -230 3042 2995 216 280 0 53 chr17 30170195 30170270 -59334283 - MIR SINE MIR -46 216 146 * 779 212 15 56 chr17 30170267 30170465 -59334088 + MIR SINE MIR 5 194 -68 1841 192 22 23 chr17 30170465 30171004 -59333549 + L1M4 LINE L1 4896 5429 -746 1055 68 0 15 chr17 30171004 30171136 -59333417 + AluYb8 SINE Alu 1 130 -188 6188 132 13 26 chr17 30171152 30171323 -59333230 + L1MC1 LINE L1 5254 5426 -907 2327 101 0 3 chr17 30171323 30171631 -59332922 + AluSc SINE Alu 1 307 -2 6188 132 13 26 chr17 30171631 30172539 -59332014 + L1MC1 LINE L1 5426 6319 -14 2184 134 0 0 chr17 30172541 30172840 -59331713 - AluSx SINE Alu -13 299 1 250 267 93 0 chr17 30172854 30172929 -59331624 + MIR SINE MIR 175 256 -6 343 308 77 8 chr17 30172932 30173062 -59331491 - MIR SINE MIR -110 152 14 2425 78 3 3 chr17 30173099 30173392 -59331161 - AluSq SINE Alu -12 301 9 651 262 30 20 chr17 30173798 30174000 -59330553 - MIR SINE MIR 0 262 59 639 271 6 18 chr17 30174098 30174159 -59330394 + MIR SINE MIR 95 155 -107 2270 57 3 44 chr17 30174159 30174480 -59330073 + AluY SINE Alu 1 309 0 639 271 6 18 chr17 30174480 30174587 -59329966 + MIR SINE MIR 155 262 0 435 276 55 16 chr17 30174587 30174714 -59329839 + MIR SINE MIR 106 237 -25 1358 166 57 166 chr17 30175039 30175226 -59329327 - L1MC5 LINE L1 -57 7904 7698 2343 93 20 0 chr17 30175226 30175527 -59329026 + AluY SINE Alu 1 307 -4 1358 166 57 166 chr17 30175527 30175548 -59329005 - L1MC5 LINE L1 -263 7698 7676 1855 139 13 58 chr17 30175548 30175858 -59328695 + AluSx SINE Alu 1 296 -16 1920 146 16 25 chr17 30175858 30176173 -59328380 + AluSx SINE Alu 1 312 0 1358 166 57 166 chr17 30176173 30176229 -59328324 - L1MC5 LINE L1 -284 7677 7616 1764 154 0 18 chr17 30176229 30176509 -59328044 - AluJb SINE Alu -32 280 6 1358 166 57 166 chr17 30176509 30176571 -59327982 - L1MC5 LINE L1 -345 7616 7549 2572 61 3 0 chr17 30176571 30176866 -59327687 - AluSp SINE Alu -17 296 1 1358 166 57 166 chr17 30176866 30177238 -59327315 - L1MC5 LINE L1 -412 7549 7279 2058 153 22 18 chr17 30177316 30177735 -59326818 + L1MB4 LINE L1 5718 6141 -39 672 120 0 0 chr17 30177791 30177891 -59326662 + FRAM SINE Alu 67 166 -10 234 105 0 0 chr17 30177891 30177929 -59326624 + L1MB4 LINE L1 6141 6178 -2 357 314 77 12 chr17 30178196 30178365 -59326188 + MIR SINE MIR 32 211 -51 1477 135 54 0 chr17 30178422 30178644 -59325909 + AluJb SINE Alu 61 294 -18 573 175 87 0 chr17 30178753 30178856 -59325697 + MER81 DNA DNA 1 112 -2 737 339 119 24 chr17 30178959 30179372 -59325181 + L2 LINE L2 2069 2564 -750 2063 137 27 0 chr17 30179372 30179664 -59324889 + AluSx SINE Alu 1 300 -12 737 339 119 24 chr17 30179664 30179879 -59324674 + L2 LINE L2 2564 2757 -557 811 160 90 0 chr17 30179890 30180046 -59324507 - MER58B DNA MER1_type 0 341 172 1056 188 0 0 chr17 30180048 30180224 -59324329 + AluSg/x SINE Alu 136 311 -1 2121 146 0 0 chr17 30180322 30180624 -59323929 - AluJb SINE Alu -9 303 2 318 349 20 27 chr17 30180713 30180862 -59323691 + L2 LINE L2 2932 3079 -193 777 244 56 9 chr17 30181033 30181246 -59323307 - MIR SINE MIR -38 224 2 442 264 63 57 chr17 30181516 30181675 -59322878 - MIR SINE MIR -74 188 29 948 133 7 0 chr17 30181899 30182034 -59322519 + AluJb SINE Alu 1 136 -176 2298 114 7 0 chr17 30182040 30182348 -59322205 + AluSp SINE Alu 1 310 -3 257 180 0 16 chr17 30182348 30182409 -59322144 + GA-rich Low_complexity Low_complexity 1 60 0 633 235 53 30 chr17 30182685 30182951 -59321602 - L1ME3 LINE L1 -318 5852 5582 2215 116 3 0 chr17 30182959 30183253 -59321300 - AluSx SINE Alu -14 298 4 204 368 16 40 chr17 30183305 30183430 -59321123 + L3b LINE CR1 1326 1447 -136 571 276 40 17 chr17 30183882 30184055 -59320498 - MIR SINE MIR -52 210 34 1027 228 51 34 chr17 30184566 30184803 -59319750 - MIR SINE MIR -21 241 1 1102 171 6 0 chr17 30186541 30186716 -59317837 - AluJo SINE Alu -5 307 132 1934 121 3 37 chr17 30186729 30187026 -59317527 + AluSx SINE Alu 2 288 -24 261 0 0 0 chr17 30187028 30187057 -59317496 + (TG)n Simple_repeat Simple_repeat 2 30 0 527 31 119 0 chr17 30187059 30187219 -59317334 + (TA)n Simple_repeat Simple_repeat 1 179 0 835 134 0 37 chr17 30187235 30187369 -59317184 - AluJo SINE Alu -183 129 1 255 311 113 26 chr17 30187505 30187656 -59316897 + L2 LINE L2 1990 2153 -1161 2225 121 0 7 chr17 30187728 30188033 -59316520 + AluSx SINE Alu 1 303 -9 913 252 19 0 chr17 30188061 30188271 -59316282 + MIR SINE MIR 49 262 0 408 356 90 3 chr17 30188271 30188560 -59315993 + L2 LINE L2 2364 2677 -637 1264 105 6 0 chr17 30188579 30188741 -59315812 - AluSg/x SINE Alu -16 294 132 1940 154 3 0 chr17 30188805 30189129 -59315424 + AluJb SINE Alu 1 325 0 222 341 114 19 chr17 30189132 30189432 -59315121 + L2 LINE L2 2739 3061 -211 190 339 16 0 chr17 30189538 30189600 -59314953 + L2 LINE L2 3139 3201 -71 1851 148 10 43 chr17 30192614 30192918 -59311635 - AluJb SINE Alu -18 294 1 202 219 0 0 chr17 30192961 30193002 -59311551 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 607 200 17 17 chr17 30193693 30193813 -59310740 + MIR SINE MIR 28 147 -115 1066 157 47 51 chr17 30193879 30194074 -59310479 + L1MB4 LINE L1 5944 6139 -41 2331 103 0 0 chr17 30194074 30194385 -59310168 - AluSx SINE Alu 0 312 1 1066 157 47 51 chr17 30194385 30194424 -59310129 + L1MB4 LINE L1 6139 6177 -3 2170 125 7 0 chr17 30194434 30194729 -59309824 + AluSx SINE Alu 1 297 -15 2475 97 0 0 chr17 30194730 30195038 -59309515 + AluSx SINE Alu 1 308 -4 186 196 0 98 chr17 30195087 30195138 -59309415 + MIR SINE MIR 217 262 0 1962 135 46 16 chr17 30195356 30195659 -59308894 - AluJb SINE Alu 0 312 1 831 223 28 51 chr17 30196155 30196370 -59308183 - MER20 DNA MER1_type -9 210 1 2320 105 0 0 chr17 30196457 30196753 -59307800 + AluSx SINE Alu 1 296 -16 2915 48 0 0 chr17 30196754 30197107 -59307446 + L1PA8 LINE L1 5820 6172 0 1086 134 27 103 chr17 30197594 30197738 -59306815 + MER96B DNA MER1_type? 177 294 -123 773 190 0 0 chr17 30197738 30197859 -59306694 + FLAM_A SINE Alu 1 121 -12 1086 134 27 103 chr17 30197859 30197975 -59306578 + MER96B DNA MER1_type? 294 417 0 553 298 78 16 chr17 30198028 30198273 -59306280 + Charlie8 DNA MER1_type 19 278 -2139 3459 186 65 17 chr17 30198313 30198702 -59305851 - MER63C DNA MER1_type -130 930 561 2357 99 3 0 chr17 30198702 30199004 -59305549 + AluSp SINE Alu 1 303 -10 3459 186 65 17 chr17 30199004 30199394 -59305159 - MER63C DNA MER1_type -499 561 113 241 260 0 14 chr17 30199398 30199492 -59305061 - MIR3 SINE MIR -113 149 12 278 240 107 0 chr17 30200299 30200374 -59304179 + MIR SINE MIR 44 126 -82 657 264 111 21 chr17 30200383 30200618 -59303935 - MIR SINE MIR -6 256 1 1027 181 0 0 chr17 30200860 30201026 -59303527 - FRAM SINE Alu -11 165 1 1519 208 35 0 chr17 30201530 30201814 -59302739 + AluJb SINE Alu 4 297 -15 536 241 63 68 chr17 30201915 30201987 -59302566 - MIR SINE MIR 0 262 191 2302 91 13 10 chr17 30201987 30202296 -59302257 - AluSx SINE Alu -2 310 1 536 241 63 68 chr17 30202296 30202414 -59302139 - MIR SINE MIR -71 191 73 259 175 0 35 chr17 30202973 30203030 -59301523 + MIR SINE MIR 72 126 -82 550 277 36 15 chr17 30203109 30203304 -59301249 + MLT1J LTR MaLR 1 199 -312 * 1390 246 46 35 chr17 30203298 30203692 -59300861 - MLT1H1 LTR MaLR -99 456 59 396 0 0 0 chr17 30203707 30203751 -59300802 + (CA)n Simple_repeat Simple_repeat 2 45 0 255 150 0 0 chr17 30203854 30203894 -59300659 - MLT1H1 LTR MaLR -530 60 21 1752 171 3 7 chr17 30203895 30204188 -59300365 + AluJo SINE Alu 2 293 -19 419 286 16 0 chr17 30204205 30204331 -59300222 + MLT1J LTR MaLR 384 511 0 184 359 0 0 chr17 30204602 30204655 -59299898 + L2 LINE L2 3176 3228 -44 312 349 50 25 chr17 30204825 30205063 -59299490 - L2 LINE L2 -785 2529 2286 290 302 67 62 chr17 30205166 30205345 -59299208 + MIR3 SINE MIR 17 196 -12 303 28 0 0 chr17 30205424 30205460 -59299093 + (CAA)n Simple_repeat Simple_repeat 2 37 0 221 253 173 0 chr17 30205724 30205799 -59298754 - L2 LINE L2 -17 3255 3168 255 31 0 0 chr17 30205883 30205915 -59298638 + (TG)n Simple_repeat Simple_repeat 2 33 0 2086 136 0 16 chr17 30205949 30206258 -59298295 - AluSx SINE Alu -8 304 1 1832 171 0 10 chr17 30206259 30206558 -59297995 - AluJo SINE Alu -16 296 1 456 226 0 0 chr17 30206570 30206654 -59297899 - MIR3 SINE MIR -11 197 114 878 151 0 22 chr17 30206657 30206796 -59297757 + AluJo SINE Alu 1 136 -176 2467 57 0 0 chr17 30206796 30207121 -59297432 + AluY SINE Alu 1 325 0 442 262 78 0 chr17 30207154 30207295 -59297258 - MIR SINE MIR -36 226 75 396 311 43 24 chr17 30207330 30207494 -59297059 - MER5A DNA MER1_type -16 173 7 491 267 203 0 chr17 30208033 30208220 -59296333 + MIR SINE MIR 29 253 -9 2547 60 0 0 chr17 30208332 30208631 -59295922 + AluSp SINE Alu 1 299 -14 1547 178 57 4 chr17 30208651 30208932 -59295621 + AluJo SINE Alu 1 296 -6 1829 238 86 51 chr17 30209007 30209244 -59295309 + L1ME3A LINE L1 5522 5749 -421 2264 119 3 0 chr17 30209244 30209556 -59294997 - AluSq SINE Alu 0 313 1 2027 129 11 0 chr17 30209562 30209907 -59294646 - AluSq SINE Alu 0 313 1 1829 238 86 51 chr17 30209907 30210287 -59294266 + L1ME3A LINE L1 5753 6168 -2 748 190 0 29 chr17 30210929 30211066 -59293487 + AluJo/FLAM SINE Alu 1 133 -169 2312 113 0 0 chr17 30211068 30211360 -59293193 - AluSc SINE Alu -17 292 1 2075 123 10 10 chr17 30211361 30211662 -59292891 - AluSx SINE Alu -11 301 1 2005 114 114 0 chr17 30211721 30212001 -59292552 + AluSx SINE Alu 1 312 0 2533 74 0 0 chr17 30212091 30212402 -59292151 - AluY SINE Alu 0 311 1 26 74 0 0 chr17 30212474 30212528 -59292025 + AT_rich Low_complexity Low_complexity 1 54 0 * 830 204 6 44 chr17 30212501 30212539 -59292014 - AluJb SINE Alu -5 307 269 1873 146 6 44 chr17 30212539 30212674 -59291879 + AluJb SINE Alu 2 141 -171 2793 23 0 0 chr17 30212674 30212977 -59291576 + AluY SINE Alu 1 303 -8 1873 146 6 44 chr17 30212977 30213157 -59291396 + AluJb SINE Alu 141 305 -7 830 204 6 44 chr17 30213157 30213299 -59291254 - AluJb SINE Alu -43 269 134 723 291 94 26 chr17 30213311 30213907 -59290646 + L1MEd LINE L1 967 1688 -802 775 183 8 0 chr17 30214260 30214391 -59290162 + AluJo/FLAM SINE Alu 1 132 -170 2236 112 0 10 chr17 30214392 30214704 -59289849 + AluSx SINE Alu 4 312 0 263 243 81 54 chr17 30214795 30214906 -59289647 + L1ME LINE L1 5772 5885 -285 2350 92 0 7 chr17 30214917 30215211 -59289342 - AluY SINE Alu -19 292 1 2284 102 3 3 chr17 30215261 30215556 -59288997 - AluSx SINE Alu -17 295 1 269 26 26 0 chr17 30215565 30215603 -59288950 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2276 92 3 0 chr17 30215605 30215888 -59288665 - AluSx SINE Alu -24 288 5 1762 141 6 73 chr17 30215919 30216246 -59288307 + AluJb SINE Alu 1 305 -7 447 259 73 60 chr17 30216330 30216478 -59288075 + MLT1L LTR MaLR 381 535 -80 2435 54 3 17 chr17 30216478 30216776 -59287777 - AluY SINE Alu -16 295 2 447 259 73 60 chr17 30216776 30216859 -59287694 + MLT1L LTR MaLR 535 615 0 325 290 81 64 chr17 30216860 30217143 -59287410 - L2 LINE L2 -746 2568 2281 1644 196 75 55 chr17 30217143 30217326 -59287227 + MLT1C LTR MaLR 6 184 -283 2287 116 0 7 chr17 30217326 30217636 -59286917 + AluSx SINE Alu 1 308 -4 1644 196 75 55 chr17 30217636 30217905 -59286648 + MLT1C LTR MaLR 184 467 0 531 314 80 59 chr17 30217905 30218552 -59286001 - L2 LINE L2 -1047 2267 1607 1373 167 129 20 chr17 30218619 30218913 -59285640 + L1MC3 LINE L1 7106 7431 -354 1661 158 38 24 chr17 30218913 30219033 -59285520 + AluJb SINE Alu 1 118 -194 2167 129 3 0 chr17 30219033 30219344 -59285209 + AluSx SINE Alu 1 312 0 1661 158 38 24 chr17 30219344 30219514 -59285039 + AluJb SINE Alu 118 295 -17 2395 60 0 0 chr17 30219516 30219838 -59284715 + AluY SINE Alu 1 322 0 1738 153 197 60 chr17 30219860 30220240 -59284313 + MLT1D LTR MaLR 1 444 -61 2171 114 0 3 chr17 30220240 30220554 -59283999 - AluSx SINE Alu 0 312 1 1738 153 197 60 chr17 30220554 30220590 -59283963 + MLT1D LTR MaLR 444 474 -31 1153 129 0 28 chr17 30220590 30220761 -59283792 - AluJb SINE Alu -11 301 134 1578 191 3 46 chr17 30220761 30220854 -59283699 - AluJo SINE Alu -2 310 215 2475 83 0 0 chr17 30220854 30221154 -59283399 - AluSg SINE Alu -10 300 1 1578 191 3 46 chr17 30221154 30221384 -59283169 - AluJo SINE Alu -97 215 1 2409 118 8 0 chr17 30221405 30221762 -59282791 - L1PB3 LINE L1 -1 6153 5794 2289 112 0 10 chr17 30221762 30222076 -59282477 + AluSx SINE Alu 1 311 -1 638 52 0 0 chr17 30222076 30222153 -59282400 - L1P5 LINE L1 -564 5590 5514 230 135 0 0 chr17 30222153 30222190 -59282363 + MLT1D LTR MaLR 467 503 -2 1802 263 83 24 chr17 30222191 30222237 -59282316 + HAL1 LINE L1 1109 1151 -1356 2144 114 6 19 chr17 30222237 30222552 -59282001 + AluJb SINE Alu 1 311 -1 1802 263 83 24 chr17 30222552 30222885 -59281668 + HAL1 LINE L1 1151 1463 -1044 2435 71 10 0 chr17 30222885 30223180 -59281373 + AluSp SINE Alu 1 298 -15 1802 263 83 24 chr17 30223180 30223543 -59281010 + HAL1 LINE L1 1463 1896 -611 1312 165 0 0 chr17 30223543 30223737 -59280816 + AluJb SINE Alu 1 194 -118 1534 65 0 15 chr17 30223834 30224033 -59280520 - L1PA5 LINE L1 -3 6151 5956 502 227 77 49 chr17 30224056 30224276 -59280277 + HAL1 LINE L1 2011 2223 -284 2472 81 0 10 chr17 30224276 30224586 -59279967 - AluSp SINE Alu -6 307 1 2069 137 3 10 chr17 30224587 30224893 -59279660 - AluJb SINE Alu -8 304 1 502 227 77 49 chr17 30224893 30225001 -59279552 + HAL1 LINE L1 2222 2400 -107 2381 102 0 10 chr17 30225029 30225342 -59279211 + AluSq SINE Alu 1 310 -3 1912 171 3 3 chr17 30225758 30226062 -59278491 + AluJo SINE Alu 1 304 -8 2153 123 7 3 chr17 30226135 30226443 -59278110 - AluSx SINE Alu -3 309 1 2379 61 44 3 chr17 30227138 30227435 -59277118 + AluY SINE Alu 2 310 -1 2007 138 0 3 chr17 30227641 30227931 -59276622 + AluSx SINE Alu 11 299 -13 2407 97 7 0 chr17 30227933 30228243 -59276310 + AluSx SINE Alu 1 312 0 364 316 39 24 chr17 30228445 30228651 -59275902 + MIR SINE MIR 8 216 -46 205 280 40 64 chr17 30228706 30228831 -59275722 - L2 LINE L2 -206 3066 2945 707 212 54 27 chr17 30228838 30229022 -59275531 - MER53 DNA DNA 0 189 1 318 235 59 0 chr17 30230302 30230387 -59274166 + MIR SINE MIR 97 186 -76 270 0 0 0 chr17 30231067 30231097 -59273456 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 2012 162 0 3 chr17 30231155 30231463 -59273090 + AluJb SINE Alu 1 307 -5 250 284 0 14 chr17 30231485 30231559 -59272994 - L2 LINE L2 -73 3240 3168 1448 118 45 5 chr17 30232098 30232319 -59272234 - MER30 DNA MER1_type 0 230 1 2646 51 0 10 chr17 30232487 30232799 -59271754 - AluY SINE Alu -1 310 2 221 288 100 12 chr17 30232884 30232964 -59271589 - MIR SINE MIR -85 123 37 2335 93 3 7 chr17 30233199 30233499 -59271054 + AluSq SINE Alu 1 299 -14 387 265 27 117 chr17 30234047 30234270 -59270283 + MIR SINE MIR 48 250 -12 241 211 70 0 chr17 30235345 30235416 -59269137 + CT-rich Low_complexity Low_complexity 3 78 0 656 188 8 8 chr17 30235443 30235576 -59268977 + MIR SINE MIR 101 233 -29 2549 65 3 0 chr17 30235890 30236196 -59268357 + AluSp SINE Alu 1 307 -6 2608 69 0 0 chr17 30236415 30236720 -59267833 - AluSx SINE Alu -7 305 1 208 241 80 80 chr17 30236758 30236783 -59267770 - MIR SINE MIR -123 139 115 1625 143 4 8 chr17 30236783 30237027 -59267526 + AluSx SINE Alu 44 286 -26 208 241 80 80 chr17 30237027 30237113 -59267440 - MIR SINE MIR -146 116 28 1265 115 111 5 chr17 30239282 30239490 -59265063 + MER30 DNA MER1_type 1 230 0 1645 160 53 3 chr17 30239552 30239834 -59264719 - AluJb SINE Alu -16 296 1 232 271 57 57 chr17 30240759 30240899 -59263654 + L3 LINE CR1 1435 1574 -3 702 181 142 10 chr17 30241043 30241248 -59263305 - L1ME3 LINE L1 -9 6153 5922 2256 79 20 0 chr17 30242608 30242900 -59261653 - AluSp SINE Alu -15 298 1 1905 132 21 3 chr17 30242912 30243200 -59261353 - AluJo SINE Alu -16 296 4 21 0 0 0 chr17 30243685 30243706 -59260847 + AT_rich Low_complexity Low_complexity 1 21 0 2213 94 21 0 chr17 30247355 30247642 -59256911 + AluSx SINE Alu 1 293 -19 288 111 0 0 chr17 30249444 30249489 -59255064 + (CA)n Simple_repeat Simple_repeat 1 45 0 24 53 0 0 chr17 30250426 30250464 -59254089 + AT_rich Low_complexity Low_complexity 1 38 0 182 37 37 0 chr17 30250785 30250812 -59253741 + (TA)n Simple_repeat Simple_repeat 1 28 0 23 33 0 0 chr17 30251409 30251439 -59253114 + AT_rich Low_complexity Low_complexity 1 30 0 276 77 0 0 chr17 30252431 30252470 -59252083 + (TA)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr17 30252656 30252678 -59251875 + AT_rich Low_complexity Low_complexity 1 22 0 2855 16 0 0 chr17 30253346 30253657 -59250896 - AluY SINE Alu 0 311 1 194 81 27 0 chr17 30253670 30253707 -59250846 + (TTATA)n Simple_repeat Simple_repeat 5 42 0 2066 114 20 7 chr17 30254025 30254322 -59250231 - AluSq SINE Alu -12 301 1 237 252 266 14 chr17 30254391 30254534 -59250019 + MIR3 SINE MIR 19 197 -11 2409 85 0 0 chr17 30254966 30255259 -59249294 - AluSq SINE Alu -20 293 1 842 105 0 77 chr17 30255265 30255408 -59249145 - FLAM_C SINE Alu 0 133 2 650 161 148 27 chr17 30255790 30255939 -59248614 - AluJo SINE Alu -84 228 62 2339 76 3 0 chr17 30255960 30256249 -59248304 - AluSq SINE Alu -18 295 6 2111 106 0 52 chr17 30256554 30256884 -59247669 - AluSp SINE Alu 0 313 1 1267 135 156 30 chr17 30257560 30257797 -59246756 - AluJo SINE Alu -15 297 31 2247 65 0 0 chr17 30257812 30258075 -59246478 - AluY SINE Alu -48 263 1 655 143 95 40 chr17 30258753 30258879 -59245674 + FLAM_C SINE Alu 1 133 0 2236 110 0 7 chr17 30259312 30259622 -59244931 + AluSg SINE Alu 3 310 0 2062 112 0 7 chr17 30259844 30260121 -59244432 + AluSx SINE Alu 1 275 -37 303 93 0 0 chr17 30260131 30260174 -59244379 + (GGGGA)n Simple_repeat Simple_repeat 4 46 0 2438 76 0 3 chr17 30260293 30260595 -59243958 - AluY SINE Alu -10 301 1 653 141 339 11 chr17 30260706 30260883 -59243670 - MER46A DNA MER2_type 0 236 2 1551 105 23 146 chr17 30260907 30261115 -59243438 - AluY SINE Alu 0 301 150 2171 90 11 4 chr17 30261115 30261393 -59243160 - AluSg SINE Alu -30 280 1 1551 105 23 146 chr17 30261393 30261527 -59243026 - AluY SINE Alu -151 150 1 300 27 0 0 chr17 30261553 30261590 -59242963 + (CA)n Simple_repeat Simple_repeat 2 38 0 556 197 13 118 chr17 30262225 30262259 -59242294 + MER58A DNA MER1_type 40 76 -2344 1506 176 48 28 chr17 30262259 30262548 -59242005 + AluJo SINE Alu 5 299 -13 556 197 13 118 chr17 30262548 30262665 -59241888 + MER58A DNA MER1_type 76 175 -49 2002 120 20 17 chr17 30263079 30263379 -59241174 - AluSq SINE Alu -12 301 1 294 319 35 40 chr17 30263639 30263801 -59240752 + L2 LINE L2 2554 2715 -599 2408 74 0 0 chr17 30263801 30264085 -59240468 + AluSx SINE Alu 1 284 -28 180 0 0 0 chr17 30264085 30264105 -59240448 + (TA)n Simple_repeat Simple_repeat 2 21 0 294 319 35 40 chr17 30264105 30264167 -59240386 + L2 LINE L2 2713 2778 -536 1858 97 0 20 chr17 30264445 30264693 -59239860 - AluSx SINE Alu -69 243 1 311 250 0 0 chr17 30264881 30264957 -59239596 + MER116 DNA Mariner 1 76 -4 1930 130 18 0 chr17 30265090 30265374 -59239179 - AluSx SINE Alu -20 292 4 2100 115 13 13 chr17 30265786 30266098 -59238455 + AluSq SINE Alu 1 312 -1 2508 48 0 3 chr17 30266311 30266602 -59237951 - AluY SINE Alu -21 290 1 25 0 0 0 chr17 30267394 30267419 -59237134 + AT_rich Low_complexity Low_complexity 1 25 0 1172 208 95 15 chr17 30267602 30267866 -59236687 - AluJo SINE Alu -15 287 3 1921 147 13 13 chr17 30267870 30268170 -59236383 - AluSx SINE Alu -12 300 1 589 206 0 0 chr17 30268500 30268602 -59235951 + AluJ/FLAM SINE Alu 1 102 -210 660 178 0 0 chr17 30268602 30268709 -59235844 + AluJo/FRAM SINE Alu 144 250 -62 1154 172 5 36 chr17 30268709 30268759 -59235794 + AluJo SINE Alu 85 135 -177 2157 121 10 7 chr17 30268759 30269064 -59235489 + AluSx SINE Alu 1 306 -6 1734 130 0 82 chr17 30269068 30269398 -59235155 + AluSx SINE Alu 1 303 -9 1154 172 5 36 chr17 30269398 30269563 -59234990 + AluJo SINE Alu 138 298 -14 991 134 30 18 chr17 30269601 30269765 -59234788 + FRAM SINE Alu 1 166 -10 2370 73 7 0 chr17 30269828 30270116 -59234437 - AluY SINE Alu -20 291 2 401 224 12 0 chr17 30270248 30270333 -59234220 + MSTD LTR MaLR 258 343 -53 2152 102 23 16 chr17 30270334 30270638 -59233915 + AluSg SINE Alu 5 310 0 836 155 0 7 chr17 30271394 30271536 -59233017 - AluJo/FRAM SINE Alu -13 299 159 698 122 0 0 chr17 30271539 30271637 -59232916 - AluJ/FLAM SINE Alu -213 99 2 2536 89 0 0 chr17 30272479 30272792 -59231761 + AluSq SINE Alu 1 313 0 2195 101 3 0 chr17 30273076 30273364 -59231189 + AluSg SINE Alu 1 289 -21 2335 99 10 0 chr17 30273373 30273675 -59230878 + AluSc SINE Alu 5 309 0 268 279 123 0 chr17 30275827 30275949 -59228604 - MIR SINE MIR -2 260 124 2382 68 3 7 chr17 30276105 30276399 -59228154 - AluY SINE Alu -18 293 1 293 228 147 44 chr17 30276687 30276823 -59227730 - MIR SINE MIR -111 151 2 1442 177 42 24 chr17 30276933 30277221 -59227332 + AluJb SINE Alu 10 302 -10 2217 119 3 0 chr17 30277366 30277668 -59226885 + AluSq SINE Alu 1 303 -10 1499 128 155 8 chr17 30277981 30278239 -59226314 - AluSg SINE Alu -14 296 1 1790 146 42 36 chr17 30278431 30278739 -59225814 + AluSx SINE Alu 3 312 0 210 71 0 0 chr17 30279091 30279119 -59225434 + (A)n Simple_repeat Simple_repeat 1 28 0 24 0 0 0 chr17 30280688 30280712 -59223841 + GC_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr17 30280886 30280909 -59223644 + GC_rich Low_complexity Low_complexity 1 23 0 44 35 0 0 chr17 30280923 30280981 -59223572 + GC_rich Low_complexity Low_complexity 1 58 0 202 284 30 0 chr17 30281768 30281835 -59222718 + C-rich Low_complexity Low_complexity 1 69 0 255 254 0 0 chr17 30281960 30282082 -59222471 + (TGG)n Simple_repeat Simple_repeat 1 122 0 180 97 0 0 chr17 30282567 30282598 -59221955 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 300 271 113 28 chr17 30283162 30283339 -59221214 + L1ME3A LINE L1 5959 6150 -20 2252 164 74 0 chr17 30283349 30283770 -59220783 - L1MB3 LINE L1 0 6183 5732 2086 112 22 0 chr17 30284010 30284307 -59220246 - AluSp SINE Alu 0 303 1 1687 168 50 3 chr17 30284454 30284752 -59219801 + AluJb SINE Alu 1 312 0 2260 77 0 11 chr17 30285247 30285533 -59219020 + AluSc SINE Alu 1 283 -26 1219 170 15 93 chr17 30285751 30285928 -59218625 - AluJb SINE Alu -11 301 159 276 91 0 0 chr17 30285928 30285972 -59218581 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1219 170 15 93 chr17 30285972 30286118 -59218435 - AluJb SINE Alu -153 159 3 2305 106 3 0 chr17 30286243 30286545 -59218008 - AluSc SINE Alu -6 303 1 22 43 0 21 chr17 30286746 30286764 -59217789 + AT_rich Low_complexity Low_complexity 1 18 -28 2051 115 7 0 chr17 30286764 30287042 -59217511 + AluSq SINE Alu 1 280 -33 22 43 0 21 chr17 30287042 30287070 -59217483 + AT_rich Low_complexity Low_complexity 18 46 0 1561 169 8 23 chr17 30287071 30287337 -59217216 + AluJb SINE Alu 1 262 -50 27 73 0 0 chr17 30287357 30287412 -59217141 + AT_rich Low_complexity Low_complexity 1 55 0 2036 101 7 42 chr17 30287444 30287752 -59216801 - AluSx SINE Alu -15 297 1 181 232 0 54 chr17 30287767 30287823 -59216730 - L2 LINE L2 0 3313 3261 21 36 0 0 chr17 30287823 30287851 -59216702 + AT_rich Low_complexity Low_complexity 1 28 0 367 276 10 0 chr17 30287969 30288067 -59216486 + MIR3 SINE MIR 105 203 -5 473 333 13 21 chr17 30288526 30288763 -59215790 + MIR SINE MIR 5 239 -23 2134 117 0 63 chr17 30288770 30288957 -59215596 - AluSx SINE Alu 0 312 154 2345 104 0 3 chr17 30288957 30289266 -59215287 - AluSg SINE Alu -2 308 1 2134 117 0 63 chr17 30289266 30289411 -59215142 - AluSx SINE Alu -158 154 1 289 133 0 55 chr17 30289411 30289476 -59215077 - AluJb SINE Alu -166 136 84 2169 114 7 3 chr17 30289655 30289952 -59214601 + AluSx SINE Alu 1 298 -14 2279 104 0 3 chr17 30290008 30290305 -59214248 + AluSq SINE Alu 1 296 -17 1561 167 3 82 chr17 30290463 30290596 -59213957 + AluJo SINE Alu 1 143 -169 2686 40 0 0 chr17 30290596 30290897 -59213656 - AluY SINE Alu -10 301 1 1561 167 3 82 chr17 30290897 30291092 -59213461 + AluJo SINE Alu 143 303 -9 1932 151 3 22 chr17 30291369 30291680 -59212873 + AluJb SINE Alu 1 305 -7 1282 204 164 76 chr17 30291765 30292183 -59212370 - MLT1F1 LTR MaLR -1 566 97 2089 108 31 0 chr17 30292183 30292469 -59212084 + AluSx SINE Alu 1 295 -17 1282 204 164 76 chr17 30292469 30292562 -59211991 - MLT1F1 LTR MaLR -470 97 14 22 35 0 0 chr17 30292718 30292747 -59211806 + AT_rich Low_complexity Low_complexity 1 29 0 667 275 17 47 chr17 30293137 30293262 -59211291 + L1MD2 LINE L1 6133 6260 -99 2124 111 7 26 chr17 30293262 30293569 -59210984 + AluSx SINE Alu 1 301 -11 667 275 17 47 chr17 30293569 30293651 -59210902 + L1MD2 LINE L1 6260 6335 -24 1673 137 107 0 chr17 30293651 30293914 -59210639 - AluSg SINE Alu -19 291 1 667 275 17 47 chr17 30293914 30293938 -59210615 + L1MD2 LINE L1 6335 6358 -1 21 57 0 0 chr17 30293979 30294014 -59210539 + AT_rich Low_complexity Low_complexity 1 35 0 2096 78 37 0 chr17 30294031 30294323 -59210230 + AluSg SINE Alu 2 303 0 2271 101 0 0 chr17 30294378 30294675 -59209878 + AluSc SINE Alu 1 297 -12 1666 146 3 74 chr17 30294680 30294989 -59209564 + AluJo SINE Alu 1 287 -25 31 0 0 0 chr17 30294989 30295020 -59209533 + AT_rich Low_complexity Low_complexity 1 31 0 2618 46 7 3 chr17 30295022 30295328 -59209225 + AluY SINE Alu 1 307 -4 1730 85 0 5 chr17 30295335 30295559 -59208994 + AluSc SINE Alu 72 294 -15 550 220 52 94 chr17 30295819 30296105 -59208448 - MLT1D LTR MaLR -231 274 1 539 163 0 0 chr17 30296105 30296191 -59208362 + MER97c DNA MER1_type? 61 146 -944 1557 108 132 16 chr17 30296191 30296476 -59208077 - AluSg1 SINE Alu 0 314 1 1661 166 6 38 chr17 30296478 30296797 -59207756 - AluJb SINE Alu -3 309 1 32 0 0 0 chr17 30296800 30296832 -59207721 + AT_rich Low_complexity Low_complexity 1 32 0 1939 135 0 21 chr17 30296845 30297134 -59207419 - AluSx SINE Alu -29 283 1 572 263 128 17 chr17 30297304 30297601 -59206952 + L2 LINE L2 2972 3301 -12 787 302 114 29 chr17 30298156 30298358 -59206195 + L2 LINE L2 2145 2328 -986 2192 128 0 0 chr17 30298358 30298655 -59205898 + AluSq SINE Alu 1 297 -16 183 42 0 0 chr17 30298658 30298682 -59205871 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 787 302 114 29 chr17 30298682 30298959 -59205594 + L2 LINE L2 2329 2669 -645 274 286 88 11 chr17 30299353 30299444 -59205109 + L2 LINE L2 3175 3272 0 1874 149 3 7 chr17 30299521 30299810 -59204743 - AluJb SINE Alu -24 288 1 2236 79 14 7 chr17 30300327 30300643 -59203910 - AluSx SINE Alu 0 318 1 2003 113 38 20 chr17 30301456 30301749 -59202804 - AluSx SINE Alu -14 298 1 1105 214 175 8 chr17 30301847 30302104 -59202449 + AluSg SINE Alu 1 300 0 1822 115 78 0 chr17 30302150 30302419 -59202134 + AluSx SINE Alu 1 290 -22 300 280 71 59 chr17 30302434 30302475 -59202078 + HAL1b LINE L1 393 432 -1965 2161 118 0 0 chr17 30302475 30302771 -59201782 - AluSx SINE Alu -6 306 11 300 280 71 59 chr17 30302771 30303012 -59201541 + HAL1b LINE L1 432 1710 -687 2535 71 0 0 chr17 30303020 30303328 -59201225 + AluY SINE Alu 1 308 -3 1974 95 80 0 chr17 30303720 30303994 -59200559 + AluY SINE Alu 1 296 -15 1934 136 0 48 chr17 30304162 30304346 -59200207 + AluJb SINE Alu 1 165 -147 2401 94 0 0 chr17 30304346 30304653 -59199900 - AluSx SINE Alu -5 307 1 1934 136 0 48 chr17 30304653 30304778 -59199775 + AluJb SINE Alu 165 295 -17 517 291 74 5 chr17 30304833 30305022 -59199531 + MIR SINE MIR 5 206 -56 1963 121 0 7 chr17 30305084 30305356 -59199197 - AluSx SINE Alu -23 289 20 1866 154 0 55 chr17 30305418 30305562 -59198991 + AluJb SINE Alu 1 151 -161 2260 118 3 0 chr17 30305562 30305868 -59198685 + AluSx SINE Alu 1 307 -5 1866 154 0 55 chr17 30305868 30306053 -59198500 + AluJb SINE Alu 151 312 0 490 207 12 95 chr17 30306053 30306222 -59198331 + L1ME4a LINE L1 5965 6119 -2 2317 119 0 0 chr17 30306285 30306595 -59197958 + AluSg SINE Alu 1 310 0 227 229 10 83 chr17 30307127 30307223 -59197330 - L2 LINE L2 0 3272 3184 1636 121 18 98 chr17 30307228 30307365 -59197188 + AluJb SINE Alu 1 147 -165 1939 151 16 3 chr17 30307365 30307670 -59196883 + AluSx SINE Alu 1 309 -3 1636 121 18 98 chr17 30307670 30307870 -59196683 + AluJb SINE Alu 147 311 -1 282 289 39 39 chr17 30307891 30308047 -59196506 - L2 LINE L2 -81 3232 3077 1845 87 0 0 chr17 30308107 30308337 -59196216 + AluSg1 SINE Alu 1 230 -79 2224 102 3 3 chr17 30309282 30309587 -59194966 - AluSx SINE Alu -7 305 1 2697 215 22 47 chr17 30309594 30309702 -59194851 + MER82 DNA MER2_type 22 131 -522 2446 70 0 10 chr17 30309702 30310004 -59194549 - AluY SINE Alu -12 299 1 2697 215 22 47 chr17 30310004 30310083 -59194470 + MER82 DNA MER2_type 131 210 -443 811 161 0 0 chr17 30310083 30310207 -59194346 + FLAM_C SINE Alu 1 124 -9 2697 215 22 47 chr17 30310207 30310660 -59193893 + MER82 DNA MER2_type 210 647 -6 374 289 0 23 chr17 30310688 30310816 -59193737 - MIR SINE MIR -127 135 11 261 297 0 0 chr17 30310994 30311068 -59193485 - MIR SINE MIR -75 187 114 1972 159 10 13 chr17 30311068 30311382 -59193171 + AluSq SINE Alu 1 313 0 487 223 166 106 chr17 30311384 30311636 -59192917 - MLT1L LTR MaLR -296 319 45 2192 119 0 0 chr17 30311636 30311938 -59192615 + AluY SINE Alu 1 302 -9 487 223 166 106 chr17 30311938 30311986 -59192567 - MLT1L LTR MaLR -570 45 1 2010 161 0 3 chr17 30311988 30312293 -59192260 + AluSx SINE Alu 2 305 -7 2907 188 104 17 chr17 30312408 30313061 -59191492 - L1MC4 LINE L1 -132 7910 7201 1994 136 3 3 chr17 30313073 30313369 -59191184 - AluSx SINE Alu -22 290 3 1064 217 90 67 chr17 30313369 30313619 -59190934 - L1MC4 LINE L1 -993 7049 6787 671 195 39 0 chr17 30313619 30313747 -59190806 + FLAM_C SINE Alu 1 133 0 1064 217 90 67 chr17 30313747 30313842 -59190711 - L1MC4 LINE L1 -1255 6787 6696 1240 223 71 29 chr17 30313843 30313894 -59190659 + MLT1A1 LTR MaLR 1 48 -317 2052 113 7 3 chr17 30313894 30314186 -59190367 + AluSx SINE Alu 7 299 -13 1240 223 71 29 chr17 30314186 30314232 -59190321 + MLT1A1 LTR MaLR 48 91 -274 1426 168 13 70 chr17 30314232 30314365 -59190188 + AluJo SINE Alu 1 140 -172 1508 214 0 4 chr17 30314365 30314645 -59189908 + AluJb SINE Alu 1 279 -33 324 0 0 0 chr17 30314649 30314685 -59189868 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 1426 168 13 70 chr17 30314685 30314861 -59189692 + AluJo SINE Alu 143 297 -15 1240 223 71 29 chr17 30314861 30315112 -59189441 + MLT1A1 LTR MaLR 91 365 0 244 245 0 0 chr17 30315171 30315220 -59189333 + MER5A DNA MER1_type 21 69 -120 2144 105 7 0 chr17 30315221 30315517 -59189036 + AluSx SINE Alu 1 298 -14 401 127 0 14 chr17 30315517 30315588 -59188965 + (GGGA)n Simple_repeat Simple_repeat 3 72 0 256 196 261 22 chr17 30315590 30315682 -59188871 + MER5A DNA MER1_type 70 183 -6 931 111 0 15 chr17 30315690 30315825 -59188728 + AluJ SINE Alu 1 133 -169 752 133 0 0 chr17 30315832 30315945 -59188608 + AluJ SINE Alu 200 312 0 2085 111 7 3 chr17 30316068 30316375 -59188178 + AluSx SINE Alu 1 308 -4 641 190 0 25 chr17 30316391 30316512 -59188041 + FLAM_A SINE Alu 8 125 -17 200 329 13 0 chr17 30316556 30316635 -59187918 + CT-rich Low_complexity Low_complexity 1 80 0 272 340 21 10 chr17 30316871 30316968 -59187585 + MIR SINE MIR 30 127 -135 324 322 74 70 chr17 30316983 30317116 -59187437 + MIR SINE MIR 19 150 -112 1785 162 3 10 chr17 30317116 30317425 -59187128 + AluJo SINE Alu 1 307 -5 1814 123 56 3 chr17 30317434 30317719 -59186834 + AluSx SINE Alu 1 300 -12 324 322 74 70 chr17 30317719 30317817 -59186736 + MIR SINE MIR 157 261 -1 * 339 248 114 13 chr17 30317802 30317951 -59186602 + MIR SINE MIR 98 261 -1 1948 122 7 13 chr17 30318072 30318239 -59186314 - AluSx SINE Alu -10 302 136 2303 80 0 3 chr17 30318239 30318538 -59186015 - AluSc SINE Alu -11 298 1 1948 122 7 13 chr17 30318538 30318674 -59185879 - AluSx SINE Alu -176 136 1 2296 74 13 0 chr17 30318722 30319021 -59185532 + AluSp SINE Alu 1 303 -10 388 283 47 121 chr17 30319849 30320213 -59184340 + L2 LINE L2 2862 3198 -74 452 266 35 0 chr17 30320269 30320382 -59184171 + L2 LINE L2 3197 3313 0 225 0 0 0 chr17 30320475 30320500 -59184053 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 2095 121 0 0 chr17 30320516 30320813 -59183740 - AluSx SINE Alu -15 297 1 2141 94 7 0 chr17 30320818 30321116 -59183437 - AluSp SINE Alu -13 300 1 1709 104 47 47 chr17 30321120 30321417 -59183136 - AluJb SINE Alu -15 297 1 416 107 0 0 chr17 30321462 30321518 -59183035 + AluJ/FLAM SINE Alu 2 57 -255 267 293 191 35 chr17 30321540 30321671 -59182882 - L2 LINE L2 -107 3206 3097 1009 191 13 65 chr17 30321671 30321901 -59182652 - MER20 DNA MER1_type -1 218 1 267 293 191 35 chr17 30321901 30322162 -59182391 - L2 LINE L2 -216 3097 2753 1911 137 0 22 chr17 30322180 30322493 -59182060 - AluSx SINE Alu -6 306 1 445 151 0 0 chr17 30322498 30322571 -59181982 - L1MB4 LINE L1 -295 5885 5813 306 260 0 62 chr17 30322648 30322744 -59181809 + L1MC4 LINE L1 6614 6703 -1339 * 319 280 0 32 chr17 30322661 30322754 -59181799 - L1MC4 LINE L1 -1339 6703 6614 297 160 0 69 chr17 30322762 30322893 -59181660 + (TA)n Simple_repeat Simple_repeat 1 122 0 355 175 0 114 chr17 30322899 30323067 -59181486 - L1MC4 LINE L1 -1339 6703 6614 303 265 0 92 chr17 30322995 30323093 -59181460 + L1MC4 LINE L1 6614 6702 -1340 * 210 217 0 22 chr17 30323100 30323146 -59181407 + (TA)n Simple_repeat Simple_repeat 1 45 0 338 204 0 82 chr17 30323146 30323244 -59181309 - L1MC4 LINE L1 -1339 6703 6614 * 375 204 0 92 chr17 30323161 30323259 -59181294 + L1MC4 LINE L1 6614 6702 -1340 337 237 0 72 chr17 30323267 30323364 -59181189 - L1MC4 LINE L1 -1339 6703 6614 * 365 234 0 53 chr17 30323296 30323390 -59181163 + L1MC4 LINE L1 6614 6702 -1340 388 188 13 56 chr17 30323422 30323547 -59181006 - L1MCa LINE L1 -1339 6983 1995 2079 169 38 13 chr17 30323552 30323922 -59180631 - L1M3 LINE L1 -390 5793 5287 1890 154 0 0 chr17 30323922 30324221 -59180332 - AluJb SINE Alu -7 305 7 2079 169 38 13 chr17 30324221 30324300 -59180253 - L1M3 LINE L1 -896 5287 5211 1858 125 10 14 chr17 30324446 30324581 -59179972 + AluSx SINE Alu 1 135 -177 2105 123 0 7 chr17 30324581 30324891 -59179662 + AluSx SINE Alu 1 308 -4 1858 125 10 14 chr17 30324891 30325052 -59179501 + AluSx SINE Alu 135 296 -16 247 256 32 88 chr17 30325240 30325365 -59179188 + L2 LINE L2 3151 3268 -4 29 47 0 0 chr17 30325461 30325504 -59179049 + AT_rich Low_complexity Low_complexity 1 43 0 1654 162 25 35 chr17 30325519 30325833 -59178720 - AluJb SINE Alu -1 311 1 1829 161 3 0 chr17 30325864 30326156 -59178397 + AluSx SINE Alu 1 293 -19 2194 98 0 3 chr17 30326405 30326701 -59177852 + AluSx SINE Alu 1 295 -17 1914 192 31 43 chr17 30326723 30327140 -59177413 + L1M4 LINE L1 4823 5234 -912 1987 141 13 0 chr17 30327140 30327439 -59177114 - AluSx SINE Alu -9 303 1 1914 192 31 43 chr17 30327439 30327536 -59177017 + L1M4 LINE L1 5234 5331 -815 311 217 70 70 chr17 30327538 30327667 -59176886 + L1M4 LINE L1 4183 4311 -1835 809 217 0 50 chr17 30327667 30327781 -59176772 + AluJo SINE Alu 125 226 -86 1921 148 0 3 chr17 30327781 30328079 -59176474 + AluJb SINE Alu 12 308 -4 809 217 0 50 chr17 30328079 30328162 -59176391 + AluJo SINE Alu 226 312 0 1689 117 109 0 chr17 30328214 30328480 -59176073 - AluSq SINE Alu -18 295 1 1980 127 0 14 chr17 30328962 30329254 -59175299 - AluSx SINE Alu -24 288 1 1259 221 66 15 chr17 30329266 30329660 -59174893 + L1M4 LINE L1 4421 4834 -1312 247 288 14 0 chr17 30329673 30329746 -59174807 + G-rich Low_complexity Low_complexity 6 79 0 373 351 35 0 chr17 30329954 30330068 -59174485 - L2 LINE L2 -2 3270 3153 2026 122 7 3 chr17 30330069 30330365 -59174188 + AluSx SINE Alu 1 297 -15 1326 157 50 75 chr17 30330391 30330709 -59173844 - AluJo SINE Alu -2 310 1 316 368 45 65 chr17 30330710 30330944 -59173609 - L2 LINE L2 -1900 1414 1190 2414 66 0 0 chr17 30330944 30331245 -59173308 - AluY SINE Alu -10 301 1 316 368 45 65 chr17 30331245 30331407 -59173146 - L2 LINE L2 -2124 1190 1026 3337 161 12 16 chr17 30331958 30332130 -59172423 - MER41D LTR ERV1 0 557 386 2181 82 7 0 chr17 30332130 30332435 -59172118 - AluSp SINE Alu 0 307 1 3337 161 12 16 chr17 30332435 30332820 -59171733 - MER41D LTR ERV1 -171 386 1 893 184 0 0 chr17 30332945 30333097 -59171456 + AluJb SINE Alu 137 288 -24 2314 72 3 7 chr17 30333676 30333980 -59170573 + AluSp SINE Alu 1 303 -10 26 30 0 0 chr17 30335260 30335293 -59169260 + GC_rich Low_complexity Low_complexity 1 33 0 2169 89 3 19 chr17 30335446 30335762 -59168791 - AluY SINE Alu 0 311 1 211 370 81 61 chr17 30335858 30336204 -59168349 - L2 LINE L2 0 3272 2920 1910 99 33 4 chr17 30336274 30336546 -59168007 + AluSq SINE Alu 1 280 -33 510 275 48 112 chr17 30337037 30337327 -59167226 - MLT1K LTR MaLR -254 334 70 1829 142 32 0 chr17 30337327 30337609 -59166944 - AluJb SINE Alu -21 291 1 510 275 48 112 chr17 30337609 30337674 -59166879 - MLT1K LTR MaLR -518 70 2 185 283 133 0 chr17 30338206 30338266 -59166287 + L2 LINE L2 3204 3271 -1 306 351 90 0 chr17 30338271 30338382 -59166171 - L2 LINE L2 -12 3260 3140 452 247 108 36 chr17 30338402 30338596 -59165957 - MLT1K LTR MaLR -7 581 374 851 80 0 0 chr17 30338664 30338777 -59165776 + AluSg/x SINE Alu 188 300 -9 1703 112 4 16 chr17 30338781 30339030 -59165523 + AluSg SINE Alu 1 246 -64 707 79 0 0 chr17 30339130 30339219 -59165334 - AluS SINE Alu -223 90 2 536 242 86 0 chr17 30339220 30339348 -59165205 + MIR SINE MIR 121 259 -3 520 103 0 0 chr17 30339384 30339452 -59165101 + U4 snRNA snRNA 1 68 -77 1470 186 8 0 chr17 30339457 30339715 -59164838 + AluSx SINE Alu 1 260 -52 279 264 55 22 chr17 30339743 30339834 -59164719 - MLT1K LTR MaLR -290 298 205 725 74 0 0 chr17 30339920 30340015 -59164538 - AluS SINE Alu -216 96 2 2404 35 3 19 chr17 30340127 30340438 -59164115 - AluY SINE Alu -5 306 1 35 41 0 0 chr17 30341351 30341400 -59163153 + GC_rich Low_complexity Low_complexity 1 49 0 24 32 0 0 chr17 30341461 30341492 -59163061 + GC_rich Low_complexity Low_complexity 1 31 0 275 238 61 102 chr17 30341690 30341767 -59162786 - L2 LINE L2 0 3313 3243 2197 91 0 7 chr17 30341767 30342065 -59162488 + AluY SINE Alu 1 296 -15 275 238 61 102 chr17 30342065 30342134 -59162419 - L2 LINE L2 -70 3243 3173 190 365 18 59 chr17 30342265 30342435 -59162118 - L2 LINE L2 -460 2854 2692 534 216 64 24 chr17 30343795 30343920 -59160633 - MIR3 SINE MIR -21 187 58 401 247 107 27 chr17 30344169 30344319 -59160234 + MIR SINE MIR 100 261 -1 751 237 59 32 chr17 30344354 30344573 -59159980 - MIR SINE MIR -36 226 2 1884 110 4 4 chr17 30344879 30345152 -59159401 - AluSx SINE Alu -39 273 1 272 261 22 43 chr17 30345543 30345635 -59158918 - MIR SINE MIR -27 235 146 2285 60 7 27 chr17 30345696 30345997 -59158556 - AluY SINE Alu -16 295 1 2068 102 17 3 chr17 30346009 30346304 -59158249 - AluSg SINE Alu -11 299 1 2349 62 0 26 chr17 30346312 30346618 -59157935 - AluY SINE Alu -13 298 1 552 263 105 11 chr17 30346899 30347089 -59157464 - MIR SINE MIR -1 261 54 3133 183 39 33 chr17 30347113 30347673 -59156880 - L1MB7 LINE L1 -11 6173 5607 2202 92 0 0 chr17 30347673 30347967 -59156586 - AluY SINE Alu -17 294 1 3133 183 39 33 chr17 30347967 30348074 -59156479 - L1MB7 LINE L1 -577 5607 5502 1994 95 4 0 chr17 30348177 30348451 -59156102 - AluSx SINE Alu -37 275 1 392 250 56 19 chr17 30348494 30348602 -59155951 - MER5B DNA MER1_type -63 115 4 1479 201 25 74 chr17 30348616 30348941 -59155612 + MLT1A2 LTR MaLR 2 306 -68 2204 108 0 0 chr17 30348941 30349246 -59155307 - AluSx SINE Alu -7 305 1 1479 201 25 74 chr17 30349246 30349312 -59155241 + MLT1A2 LTR MaLR 306 374 0 2161 98 0 13 chr17 30349330 30349647 -59154906 - AluSq SINE Alu 0 313 1 1089 85 251 20 chr17 30349648 30349847 -59154706 - AluSg1 SINE Alu -9 300 56 240 270 0 16 chr17 30349934 30349997 -59154556 + MIR SINE MIR 199 260 -2 204 125 0 0 chr17 30350590 30350622 -59153931 + (T)n Simple_repeat Simple_repeat 1 32 0 1609 183 7 3 chr17 30350643 30350943 -59153610 - AluJo SINE Alu -9 303 3 2144 78 0 7 chr17 30351300 30351604 -59152949 - AluSc SINE Alu 0 302 1 1500 165 162 17 chr17 30351879 30352225 -59152328 - MSTD LTR MaLR 0 396 1 2154 103 3 0 chr17 30352261 30352553 -59152000 - AluSg SINE Alu -17 293 1 1180 83 13 0 chr17 30352806 30352963 -59151590 - AluSg/x SINE Alu -16 296 138 1918 84 0 111 chr17 30353066 30353398 -59151155 - AluSx SINE Alu -15 297 3 1514 167 56 0 chr17 30353405 30353692 -59150861 - AluJb SINE Alu -9 303 1 1767 102 3 46 chr17 30353695 30353871 -59150682 - AluSq SINE Alu -3 310 128 2103 114 0 0 chr17 30353871 30354168 -59150385 - AluSg SINE Alu -13 297 1 2289 97 0 0 chr17 30354170 30354479 -59150074 - AluY SINE Alu -2 309 1 1767 102 3 46 chr17 30354479 30354583 -59149970 - AluSq SINE Alu -186 127 39 591 151 226 0 chr17 30354669 30354797 -59149756 + FRAM SINE Alu 24 175 0 427 221 165 136 chr17 30355046 30355422 -59149131 + MLT1K LTR MaLR 202 588 0 2170 107 10 0 chr17 30355457 30355756 -59148797 - AluSx SINE Alu -10 302 1 198 0 0 0 chr17 30355891 30355913 -59148640 + (A)n Simple_repeat Simple_repeat 1 22 0 192 250 177 21 chr17 30356311 30356407 -59148146 - L2 LINE L2 -181 3091 2981 2142 81 0 30 chr17 30356448 30356781 -59147772 - AluY SINE Alu 0 311 1 1150 148 0 6 chr17 30356918 30357100 -59147453 - MLT1F1 LTR MaLR -386 181 1 2121 121 0 10 chr17 30357172 30357486 -59147067 - AluSx SINE Alu -1 311 1 2090 119 0 7 chr17 30357562 30357864 -59146689 - AluSx SINE Alu -10 302 3 329 301 75 34 chr17 30357877 30358023 -59146530 + L2 LINE L2 2359 2510 -804 1627 159 84 22 chr17 30358040 30358360 -59146193 + MER2 DNA MER2_type 6 345 0 285 272 112 8 chr17 30358367 30358492 -59146061 + L2 LINE L2 2551 2688 -626 1049 180 0 0 chr17 30358494 30358672 -59145881 - FRAM SINE Alu -5 171 1 430 97 16 0 chr17 30358778 30358840 -59145713 - AluSq SINE Alu -117 196 134 2186 89 0 42 chr17 30358840 30359009 -59145544 - AluSq SINE Alu -13 300 126 351 0 0 0 chr17 30359009 30359048 -59145505 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2033 84 0 31 chr17 30359048 30359335 -59145218 - AluSg SINE Alu -28 282 5 2186 89 0 42 chr17 30359335 30359477 -59145076 - AluSq SINE Alu -185 128 1 263 308 34 17 chr17 30359493 30359610 -59144943 + L2 LINE L2 2993 3111 -161 242 259 0 0 chr17 30359632 30359686 -59144867 + L2 LINE L2 3214 3267 -5 24 32 0 0 chr17 30359980 30360011 -59144542 + AT_rich Low_complexity Low_complexity 1 31 0 759 137 0 8 chr17 30360013 30360130 -59144423 - FLAM_C SINE Alu -17 116 1 2073 107 0 0 chr17 30360143 30360456 -59144097 - AluSg SINE Alu 0 313 1 189 0 0 0 chr17 30360456 30360477 -59144076 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2027 120 0 0 chr17 30360477 30360761 -59143792 - AluSq SINE Alu -29 284 1 2102 121 0 13 chr17 30360807 30361121 -59143432 - AluSx SINE Alu -2 310 1 808 214 109 5 chr17 30361738 30361939 -59142614 - MIR SINE MIR -36 226 5 2570 55 0 6 chr17 30363727 30364039 -59140514 + AluY SINE Alu 1 310 -1 1891 134 4 4 chr17 30364159 30364428 -59140125 + AluSx SINE Alu 10 278 -34 2489 53 0 31 chr17 30364455 30364776 -59139777 + AluY SINE Alu 1 311 0 333 291 140 22 chr17 30364782 30364961 -59139592 + MIR SINE MIR 57 256 -6 1838 107 3 128 chr17 30365262 30365607 -59138946 + AluSx SINE Alu 1 302 0 1755 84 13 8 chr17 30366470 30366708 -59137845 + AluSc SINE Alu 58 296 -13 2163 112 26 7 chr17 30366718 30367023 -59137530 + AluSq SINE Alu 1 311 -2 385 203 28 63 chr17 30367024 30367167 -59137386 + L1MC5 LINE L1 7649 7786 -175 1626 127 24 106 chr17 30367171 30367502 -59137051 + AluYb8 SINE Alu 6 309 -9 1737 174 3 16 chr17 30367522 30367827 -59136726 + AluJo SINE Alu 5 305 -7 307 219 32 71 chr17 30367828 30367983 -59136570 + L1MC5 LINE L1 7779 7927 -34 313 314 36 18 chr17 30368126 30368346 -59136207 - L2 LINE L2 -1250 2064 1841 379 226 12 0 chr17 30368595 30368679 -59135874 - AluY SINE Alu -1 300 216 634 204 0 0 chr17 30368708 30368821 -59135732 + AluJo/FLAM SINE Alu 6 118 -194 1933 139 7 7 chr17 30368821 30369122 -59135431 - AluSx SINE Alu -11 301 1 309 65 0 0 chr17 30369126 30369172 -59135381 - Alu SINE Alu 0 301 256 1149 30 8 0 chr17 30369451 30369582 -59134971 + AluY SINE Alu 1 132 -179 2189 85 0 51 chr17 30369694 30370010 -59134543 + AluSx SINE Alu 1 300 -12 2503 58 0 0 chr17 30370015 30370307 -59134246 + AluY SINE Alu 1 292 -19 1412 140 92 4 chr17 30371594 30371844 -59132709 + AluSx SINE Alu 38 309 -3 449 170 19 57 chr17 30371844 30371950 -59132603 + L1MD3 LINE L1 7894 7995 0 203 318 116 53 chr17 30372137 30372204 -59132349 - MIR SINE MIR -6 256 195 1649 143 42 31 chr17 30372204 30372491 -59132062 + AluJb SINE Alu 5 294 -18 203 318 116 53 chr17 30372491 30372612 -59131941 - MIR SINE MIR -67 195 56 2313 112 3 0 chr17 30373183 30373488 -59131065 - AluSx SINE Alu -6 306 1 183 80 0 0 chr17 30373580 30373605 -59130948 + (T)n Simple_repeat Simple_repeat 1 25 0 1489 124 0 10 chr17 30373611 30373820 -59130733 - AluSx SINE Alu -105 207 1 472 186 98 0 chr17 30374109 30374211 -59130342 + MER3 DNA MER1_type 94 205 -4 382 285 51 44 chr17 30374436 30374573 -59129980 - MER91A DNA MER1_type -19 177 40 2544 39 0 0 chr17 30374953 30375268 -59129285 + AluY SINE Alu 1 315 0 1302 57 38 0 chr17 30375557 30375715 -59128838 + AluY SINE Alu 127 290 -21 1551 173 28 18 chr17 30375731 30376015 -59128538 + AluJb SINE Alu 7 293 -19 923 251 156 3 chr17 30376034 30376381 -59128172 + L1MB5 LINE L1 3469 3868 -2278 1956 151 0 3 chr17 30376399 30376698 -59127855 + AluSg SINE Alu 1 298 -12 957 203 100 63 chr17 30376700 30376746 -59127807 + L1MB5 LINE L1 4018 4061 -2085 2240 87 13 7 chr17 30376746 30377044 -59127509 + AluSp SINE Alu 1 300 -13 957 203 100 63 chr17 30377044 30377297 -59127256 + L1MB5 LINE L1 4061 4328 -1818 1691 152 42 3 chr17 30377301 30377584 -59126969 + AluJb SINE Alu 6 299 -13 1037 176 6 0 chr17 30377584 30377754 -59126799 + AluJb SINE Alu 134 304 -8 1259 206 49 80 chr17 30377754 30377836 -59126717 + L1MB5 LINE L1 4322 4405 -1741 1733 173 7 17 chr17 30377836 30378137 -59126416 + AluJo SINE Alu 1 298 -14 2266 82 24 0 chr17 30378141 30378433 -59126120 + AluSp SINE Alu 2 300 -13 1259 206 49 80 chr17 30378433 30378779 -59125774 + L1MB5 LINE L1 4408 4743 -1403 1102 215 73 36 chr17 30378779 30379109 -59125444 - MER2 DNA MER2_type -1 343 2 1259 206 49 80 chr17 30379109 30379125 -59125428 + L1MB5 LINE L1 4743 4758 -1388 1744 160 3 70 chr17 30379125 30379437 -59125116 + AluJo SINE Alu 1 291 -21 1912 159 13 0 chr17 30379443 30379744 -59124809 + AluJb SINE Alu 1 305 -7 324 225 0 0 chr17 30379745 30379816 -59124737 + L1MB5 LINE L1 5124 5194 -952 337 197 47 31 chr17 30380180 30380307 -59124246 + L1MB5 LINE L1 5197 5325 -821 2078 123 3 7 chr17 30380315 30380624 -59123929 + AluSx SINE Alu 1 308 -4 195 276 69 0 chr17 30380646 30380704 -59123849 - L2 LINE L2 -4 3309 3248 35 41 0 0 chr17 30381055 30381104 -59123449 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr17 30381304 30381326 -59123227 + AT_rich Low_complexity Low_complexity 1 22 0 2190 106 0 3 chr17 30381353 30381645 -59122908 - AluSx SINE Alu -17 295 5 3649 151 28 112 chr17 30381978 30382361 -59122192 + L1MB5 LINE L1 5343 5757 -417 1909 116 7 25 chr17 30382361 30382645 -59121908 + AluSx SINE Alu 1 279 -33 3649 151 28 112 chr17 30382645 30382771 -59121782 + L1MB5 LINE L1 5757 5892 -282 2252 116 0 7 chr17 30382771 30383074 -59121479 + AluSx SINE Alu 1 301 -11 2225 108 0 3 chr17 30383080 30383366 -59121187 + AluSx SINE Alu 1 285 -27 3649 151 28 112 chr17 30383366 30383447 -59121106 + L1MB5 LINE L1 5897 5983 -191 2444 76 7 3 chr17 30383447 30383751 -59120802 + AluY SINE Alu 1 305 -6 3649 151 28 112 chr17 30383751 30384010 -59120543 + L1MB5 LINE L1 5983 6124 -50 1990 161 3 0 chr17 30384010 30384315 -59120238 - AluJb SINE Alu -6 306 1 3649 151 28 112 chr17 30384315 30384356 -59120197 + L1MB5 LINE L1 6124 6167 -7 202 224 0 134 chr17 30384503 30384570 -59119983 + MIR SINE MIR 87 144 -64 2237 128 0 0 chr17 30385287 30385592 -59118961 + AluSx SINE Alu 1 305 -7 312 27 0 0 chr17 30385603 30385640 -59118913 + (GGAA)n Simple_repeat Simple_repeat 4 40 0 375 225 203 5 chr17 30385704 30385891 -59118662 + L1ME3 LINE L1 5938 6161 -1 1974 159 0 3 chr17 30385937 30386239 -59118314 + AluSx SINE Alu 1 301 -11 2868 9 0 13 chr17 30386239 30386554 -59117999 + AluYa5 SINE Alu 1 311 0 2362 76 9 22 chr17 30386695 30387010 -59117543 + AluSx SINE Alu 1 311 -1 2232 113 0 7 chr17 30387077 30387379 -59117174 + AluSq SINE Alu 1 300 -13 491 177 89 0 chr17 30387379 30387503 -59117050 - MIR SINE MIR -48 214 80 2475 77 3 0 chr17 30387997 30388295 -59116258 + AluY SINE Alu 1 299 -12 1196 106 19 0 chr17 30388296 30388456 -59116097 + AluSq SINE Alu 132 294 -19 1396 189 12 12 chr17 30388637 30388891 -59115662 - AluJo SINE Alu -9 303 50 277 30 0 0 chr17 30388891 30388924 -59115629 + MER51A-int LTR ERV1 7116 7148 -389 610 110 66 0 chr17 30388924 30389015 -59115538 + LTR54B LTR ERV1 3 99 -399 2220 159 49 0 chr17 30389015 30389385 -59115168 + MER51A-int LTR ERV1 7428 7815 -1 3294 129 65 66 chr17 30389387 30390022 -59114531 + MER51A LTR ERV1 1 634 0 941 146 61 0 chr17 30390361 30390525 -59114028 + L1MD3 LINE L1 7729 7902 -93 277 98 24 0 chr17 30390526 30390567 -59113986 + Alu SINE Alu 1 42 -260 1421 104 0 0 chr17 30390667 30390849 -59113704 - AluSq SINE Alu -131 182 1 1648 197 3 7 chr17 30390933 30391227 -59113326 + AluJo SINE Alu 5 297 -15 2366 86 0 0 chr17 30391348 30391649 -59112904 + AluY SINE Alu 3 303 -8 1768 140 7 7 chr17 30391704 30391976 -59112577 + AluJb SINE Alu 30 301 -11 231 262 145 35 chr17 30392021 30392128 -59112425 - MIR SINE MIR -2 260 166 2336 95 0 19 chr17 30392128 30392443 -59112110 + AluSq SINE Alu 4 312 -1 231 262 145 35 chr17 30392443 30392455 -59112098 - MIR SINE MIR -96 166 157 2251 97 10 3 chr17 30392455 30392755 -59111798 + AluSp SINE Alu 1 302 -11 231 262 145 35 chr17 30392755 30392779 -59111774 - MIR SINE MIR -105 157 100 1247 195 79 14 chr17 30392792 30393069 -59111484 + AluJo SINE Alu 1 295 -17 318 148 0 0 chr17 30393106 30393160 -59111393 + (TA)n Simple_repeat Simple_repeat 2 55 0 233 244 47 23 chr17 30393162 30393248 -59111305 + L1MC4 LINE L1 6616 6703 -1339 248 196 54 0 chr17 30393248 30393304 -59111249 + (CATG)n Simple_repeat Simple_repeat 2 60 0 273 119 0 0 chr17 30393305 30393347 -59111206 + (TA)n Simple_repeat Simple_repeat 2 43 0 2178 103 0 4 chr17 30393358 30393639 -59110914 - AluSg SINE Alu -30 280 1 2348 97 0 10 chr17 30393640 30393948 -59110605 - AluSx SINE Alu -7 305 1 2130 115 27 3 chr17 30393949 30394245 -59110308 - AluSx SINE Alu -9 303 1 1840 159 0 44 chr17 30394993 30395314 -59109239 + AluJb SINE Alu 1 307 -5 1900 146 3 7 chr17 30395405 30395707 -59108846 - AluSx SINE Alu -5 307 7 1608 179 21 17 chr17 30395711 30396001 -59108552 - AluJo SINE Alu -21 291 1 864 129 0 0 chr17 30396025 30396149 -59108404 - FLAM_C SINE Alu -19 124 1 1612 204 17 0 chr17 30396531 30396820 -59107733 - AluJo SINE Alu -18 294 1 1634 157 7 60 chr17 30396868 30397191 -59107362 + AluJb SINE Alu 1 307 0 948 208 0 0 chr17 30397461 30397634 -59106919 + AluJb SINE Alu 137 309 -3 1737 157 44 3 chr17 30398144 30398437 -59106116 - AluSg SINE Alu -5 305 1 975 119 0 8 chr17 30398442 30398576 -59105977 - AluSq/x SINE Alu -180 133 1 21 57 0 0 chr17 30398671 30398706 -59105847 + AT_rich Low_complexity Low_complexity 1 35 0 1567 187 10 17 chr17 30398728 30399017 -59105536 + AluJb SINE Alu 3 289 -23 1638 151 53 33 chr17 30399384 30399683 -59104870 + AluJb SINE Alu 4 308 -4 1571 136 136 98 chr17 30399684 30400082 -59104471 + MSTA LTR MaLR 1 413 -15 1925 149 3 19 chr17 30400117 30400426 -59104127 + AluJo SINE Alu 2 305 -7 478 258 133 0 chr17 30400431 30400582 -59103971 + MER112 DNA MER1_type 90 260 0 2309 96 13 3 chr17 30400915 30401218 -59103335 - AluSq SINE Alu -5 308 3 1111 81 0 7 chr17 30401318 30401454 -59103099 - AluSq/x SINE Alu -177 135 1 1537 169 70 18 chr17 30401457 30401730 -59102823 - AluJo SINE Alu -16 296 10 2189 96 24 0 chr17 30401831 30402123 -59102430 + AluSg SINE Alu 1 299 -11 1838 147 58 12 chr17 30402169 30402495 -59102058 - MER61A LTR ERV1 -2 341 1 17849 99 21 24 chr17 30402524 30404528 -59100025 - MER61A-int LTR ERV1 -45 5172 3133 2284 93 7 3 chr17 30404528 30404830 -59099723 + AluSq SINE Alu 1 303 -10 17849 99 21 24 chr17 30404830 30405736 -59098817 - MER61A-int LTR ERV1 -2084 3133 2226 2013 128 0 0 chr17 30405736 30406041 -59098512 - AluSg SINE Alu 0 305 1 1053 96 7 0 chr17 30406041 30406176 -59098377 - AluSq/x SINE Alu -176 136 1 2242 106 3 3 chr17 30406408 30406711 -59097842 - AluSg SINE Alu -7 303 1 2244 95 0 0 chr17 30406926 30407211 -59097342 + AluSx SINE Alu 9 293 -19 1164 179 33 5 chr17 30407490 30407702 -59096851 - MER20 DNA MER1_type 0 219 2 1438 167 0 117 chr17 30407947 30408289 -59096264 - AluJb SINE Alu 0 302 1 537 206 22 44 chr17 30408297 30408433 -59096120 - L1ME3 LINE L1 0 6162 6030 1277 204 119 15 chr17 30408439 30408708 -59095845 - AluJo SINE Alu -15 297 1 2043 142 0 3 chr17 30408862 30409164 -59095389 - AluJb SINE Alu -7 305 5 913 160 53 43 chr17 30409288 30409476 -59095077 - AluJo SINE Alu -10 302 113 693 139 0 0 chr17 30409536 30409637 -59094916 - AluJ/FLAM SINE Alu -210 102 2 1751 154 34 10 chr17 30409644 30409937 -59094616 - AluSx SINE Alu -12 300 1 1325 215 53 59 chr17 30409944 30410125 -59094428 - L1ME1 LINE L1 0 6184 6003 2184 129 3 3 chr17 30410125 30410434 -59094119 - AluSx SINE Alu -3 309 1 1325 215 53 59 chr17 30410434 30410730 -59093823 - L1ME1 LINE L1 -181 6003 5707 234 0 0 0 chr17 30410730 30410756 -59093797 + (TA)n Simple_repeat Simple_repeat 2 27 0 2475 77 3 0 chr17 30410756 30411054 -59093499 - AluY SINE Alu -12 299 1 1325 215 53 59 chr17 30411054 30411077 -59093476 - L1ME1 LINE L1 -475 5709 5652 491 177 89 0 chr17 30411548 30411672 -59092881 + MIR SINE MIR 80 214 -48 2232 113 0 7 chr17 30411672 30411974 -59092579 - AluSq SINE Alu -13 300 1 2362 76 9 22 chr17 30412041 30412356 -59092197 - AluSx SINE Alu -1 311 1 2868 9 0 13 chr17 30412497 30412812 -59091741 - AluYa5 SINE Alu 0 311 1 1974 159 0 3 chr17 30412812 30413114 -59091439 - AluSx SINE Alu -11 301 1 375 225 203 5 chr17 30413160 30413347 -59091206 - L1ME3 LINE L1 -1 6161 5938 312 27 0 0 chr17 30413411 30413448 -59091105 + (TTCC)n Simple_repeat Simple_repeat 4 40 0 2237 128 0 0 chr17 30413459 30413764 -59090789 - AluSx SINE Alu -7 305 1 221 224 0 134 chr17 30414481 30414548 -59090005 - MIR SINE MIR -64 144 87 313 49 0 0 chr17 30414695 30414736 -59089817 - L1MB5 LINE L1 -7 6167 6127 1972 161 3 0 chr17 30414736 30415041 -59089512 + AluJb SINE Alu 1 306 -6 4948 126 48 15 chr17 30415155 30415459 -59089094 - Tigger1 DNA MER2_type -634 1784 1491 2259 101 3 3 chr17 30415459 30415755 -59088798 - AluSx SINE Alu -16 296 1 2390 83 0 6 chr17 30415764 30416078 -59088475 - AluSp SINE Alu -1 312 1 4948 126 48 15 chr17 30416078 30416557 -59087996 - Tigger1 DNA MER2_type -934 1484 965 478 131 0 0 chr17 30416558 30416619 -59087934 + AluS SINE Alu 3 63 -255 1830 216 111 43 chr17 30416907 30416919 -59087634 - L1 LINE L1 -2171 3975 3965 2223 107 7 0 chr17 30416919 30417219 -59087334 - AluSx SINE Alu -10 302 1 1830 216 111 43 chr17 30417219 30417574 -59086979 - L1 LINE L1 -2181 3965 3636 713 172 16 8 chr17 30417574 30417696 -59086857 + FLAM_C SINE Alu 2 124 -9 1830 216 111 43 chr17 30417696 30417957 -59086596 - L1 LINE L1 -2510 3636 3303 1561 80 10 0 chr17 30417964 30418164 -59086389 + AluSc SINE Alu 1 202 -107 1896 133 6 50 chr17 30418267 30418590 -59085963 + AluSg SINE Alu 1 309 -1 2196 124 13 0 chr17 30418598 30418896 -59085657 + AluSx SINE Alu 1 302 -10 1258 182 101 14 chr17 30419126 30419249 -59085304 - L1MB8 LINE L1 -5 6173 6062 2343 85 0 29 chr17 30419249 30419565 -59084988 - AluY SINE Alu -4 307 1 1258 182 101 14 chr17 30419565 30419738 -59084815 - L1MB8 LINE L1 -116 6062 5851 1908 178 76 29 chr17 30419744 30420133 -59084420 - L1MB8 LINE L1 -743 5403 4989 2283 101 0 3 chr17 30420133 30420431 -59084122 - AluSx SINE Alu -15 297 1 1908 178 76 29 chr17 30420431 30420486 -59084067 - L1MB8 LINE L1 -1157 4989 4938 233 248 134 9 chr17 30420470 30420641 -59083912 + L1MEc LINE L1 2147 2302 -4238 * 281 229 16 0 chr17 30422175 30422236 -59082317 - MER58 DNA MER1_type 0 2420 2359 283 349 0 0 chr17 30422272 30422355 -59082198 - MER58 DNA MER1_type -300 86 4 643 257 81 65 chr17 30422375 30422698 -59081855 - L1MC4 LINE L1 -90 7952 7625 262 361 78 43 chr17 30422944 30423315 -59081238 + L2 LINE L2 2508 2891 -423 2239 107 0 0 chr17 30423345 30423635 -59080918 + AluSg SINE Alu 1 290 -20 2197 114 8 36 chr17 30423899 30424258 -59080295 + L1MA3 LINE L1 5477 5825 -480 1538 105 44 22 chr17 30424258 30424486 -59080067 + AluSq SINE Alu 1 233 -80 1037 126 5 126 chr17 30424770 30424815 -59079738 + AluSg/x SINE Alu 92 141 -171 2009 123 0 75 chr17 30424815 30425149 -59079404 + AluSx SINE Alu 1 309 -3 1037 126 5 126 chr17 30425149 30425309 -59079244 + AluSg/x SINE Alu 141 272 -40 234 0 0 0 chr17 30425615 30425641 -59078912 + (T)n Simple_repeat Simple_repeat 1 26 0 292 252 77 68 chr17 30425826 30425935 -59078618 - L1M4 LINE L1 -2229 3917 3810 1991 133 25 0 chr17 30425935 30426221 -59078332 - AluSx SINE Alu -19 293 1 292 252 77 68 chr17 30426221 30426436 -59078117 - L1M4 LINE L1 -2336 3810 3590 2494 54 3 0 chr17 30427055 30427349 -59077204 - AluY SINE Alu -16 295 1 328 275 7 80 chr17 30427437 30427575 -59076978 - L1ME3A LINE L1 -38 6132 6005 245 27 54 0 chr17 30427581 30427618 -59076935 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2024 134 0 11 chr17 30427620 30427904 -59076649 - AluSx SINE Alu -31 281 1 2153 116 3 3 chr17 30427913 30428214 -59076339 - AluSx SINE Alu -11 301 1 2155 122 0 3 chr17 30428331 30428626 -59075927 - AluSx SINE Alu -18 294 1 792 129 0 9 chr17 30428878 30428994 -59075559 + FLAM_C SINE Alu 2 116 -17 22 0 0 0 chr17 30429012 30429034 -59075519 + AT_rich Low_complexity Low_complexity 1 22 0 2134 143 88 13 chr17 30429086 30429484 -59075069 - L1MB3 LINE L1 -2 6181 5754 237 299 52 31 chr17 30429872 30429969 -59074584 - MER5A DNA MER1_type -51 138 40 250 135 19 0 chr17 30430271 30430323 -59074230 + L1MB7 LINE L1 6132 6184 0 731 171 8 0 chr17 30430501 30430618 -59073935 - Tigger1 DNA MER2_type -1 2417 2300 801 105 60 60 chr17 30430619 30430752 -59073801 + AluSq/x SINE Alu 2 134 -179 5670 143 11 26 chr17 30430776 30431660 -59072893 + Tigger1 DNA MER2_type 1 872 -1546 2048 125 3 28 chr17 30431660 30431979 -59072574 + AluSx SINE Alu 1 311 -1 5670 143 11 26 chr17 30431979 30432008 -59072545 + Tigger1 DNA MER2_type 872 900 -1518 4895 206 34 63 chr17 30432108 30432951 -59071602 + L1MB4 LINE L1 3562 4428 -1718 2109 121 28 0 chr17 30432951 30433241 -59071312 + AluSx SINE Alu 1 298 -14 1693 109 0 0 chr17 30433242 30433472 -59071081 + AluY SINE Alu 82 311 0 4895 206 34 63 chr17 30433472 30434045 -59070508 + L1MB4 LINE L1 4428 4938 -1208 1730 162 0 35 chr17 30434045 30434360 -59070193 + AluJo SINE Alu 1 304 -8 4895 206 34 63 chr17 30434360 30434413 -59070140 + L1MB4 LINE L1 4938 4991 -1155 1135 111 0 7 chr17 30434413 30434595 -59069958 + AluSg/x SINE Alu 130 310 0 1076 154 0 6 chr17 30434611 30434773 -59069780 + AluSx SINE Alu 1 161 -151 2041 43 0 0 chr17 30434773 30435003 -59069550 + AluY SINE Alu 71 300 -11 533 163 0 0 chr17 30435005 30435097 -59069456 + L1MB5 LINE L1 5883 5974 -200 * 2454 185 40 12 chr17 30435092 30435610 -59068943 + L1MB4 LINE L1 5555 6087 -93 1848 171 3 0 chr17 30435886 30436228 -59068325 - AluJb SINE Alu 0 312 1 1670 183 0 14 chr17 30437346 30437652 -59066901 + AluJo SINE Alu 1 302 0 200 239 315 0 chr17 30437677 30437769 -59066784 + MIR SINE MIR 22 142 -120 1341 233 13 19 chr17 30437775 30438088 -59066465 + AluJo SINE Alu 1 311 -1 228 135 0 0 chr17 30438096 30438133 -59066420 + (GGAAA)n Simple_repeat Simple_repeat 3 39 0 334 240 50 20 chr17 30438143 30438243 -59066310 + MIR SINE MIR 157 259 -3 2311 110 0 0 chr17 30438303 30438603 -59065950 - AluSx SINE Alu -12 300 1 214 242 232 42 chr17 30438850 30438945 -59065608 + MIR3 SINE MIR 48 160 -48 182 384 51 36 chr17 30439105 30439243 -59065310 + L2 LINE L2 2970 3109 -163 322 293 103 37 chr17 30439831 30440152 -59064401 + L1M4 LINE L1 4877 5218 -928 207 0 0 0 chr17 30440183 30440206 -59064347 + (A)n Simple_repeat Simple_repeat 1 23 0 2121 110 3 0 chr17 30440206 30440522 -59064031 + AluSx SINE Alu 1 317 0 1785 158 7 28 chr17 30440523 30440814 -59063739 + AluSx SINE Alu 1 285 -27 1112 177 0 6 chr17 30440947 30441122 -59063431 + FAM SINE Alu 1 174 -1 2031 149 0 3 chr17 30441122 30441424 -59063129 + AluSq SINE Alu 1 301 -12 493 183 21 21 chr17 30441424 30441517 -59063036 - MER7A DNA MER2_type -255 91 1 352 267 0 9 chr17 30441518 30441623 -59062930 + L1M4 LINE L1 2854 2957 -3189 1582 90 0 0 chr17 30441623 30441824 -59062729 + AluY SINE Alu 3 203 -108 2154 220 74 67 chr17 30441824 30442761 -59061792 + L1M4 LINE L1 3081 4010 -2136 756 81 61 0 chr17 30442761 30442860 -59061693 + U6 snRNA snRNA 1 105 -2 1414 78 6 0 chr17 30442860 30443039 -59061514 + L1MA1 LINE L1 6123 6302 0 2154 220 74 67 chr17 30443039 30443580 -59060973 + L1M4 LINE L1 4009 4730 -1416 2146 106 10 0 chr17 30444036 30444328 -59060225 - AluSx SINE Alu -17 295 1 1017 99 0 0 chr17 30445256 30445387 -59059166 - AluSq/x SINE Alu -182 131 1 309 105 0 10 chr17 30445398 30445447 -59059106 - L1M4 LINE L1 -351 5815 5773 232 178 0 0 chr17 30445758 30445803 -59058750 + A-rich Low_complexity Low_complexity 1 45 0 1637 170 31 50 chr17 30445805 30446123 -59058430 + AluJb SINE Alu 1 312 0 2208 83 3 17 chr17 30446287 30446596 -59057957 - AluSp SINE Alu 0 305 1 1087 142 0 6 chr17 30446675 30446837 -59057716 - AluSc SINE Alu -17 292 132 2143 123 7 0 chr17 30446837 30447138 -59057415 - AluSp SINE Alu -10 303 1 1861 123 51 10 chr17 30447167 30447327 -59057226 - AluSx SINE Alu -7 305 153 2421 74 0 7 chr17 30447327 30447625 -59056928 - AluY SINE Alu -15 296 1 1861 123 51 10 chr17 30447625 30447757 -59056796 - AluSx SINE Alu -159 153 1 445 319 38 6 chr17 30448041 30448198 -59056355 + L2 LINE L2 2898 3059 -254 1833 163 7 0 chr17 30448202 30448491 -59056062 - AluSx SINE Alu -19 293 3 908 150 6 60 chr17 30448552 30448719 -59055834 + AluJb SINE Alu 23 180 -132 2220 86 3 16 chr17 30448947 30449250 -59055303 - AluY SINE Alu -12 299 1 2189 92 0 20 chr17 30449260 30449554 -59054999 - AluSx SINE Alu -24 288 1 1917 149 3 19 chr17 30449682 30449990 -59054563 - AluJb SINE Alu -7 305 3 1593 164 27 0 chr17 30450231 30450517 -59054036 - AluJo SINE Alu 0 306 14 324 0 0 0 chr17 30450600 30450636 -59053917 + (CA)n Simple_repeat Simple_repeat 2 37 0 7066 55 19 13 chr17 30451707 30453209 -59051344 + SVA Other Other 23 1376 -10 347 248 0 92 chr17 30453290 30453399 -59051154 + MER58 DNA MER1_type 1 99 -116 2566 57 0 0 chr17 30453406 30453706 -59050847 + AluY SINE Alu 2 301 -10 305 143 191 0 chr17 30453723 30453786 -59050767 + MER58 DNA MER1_type 2318 2392 -28 214 178 0 0 chr17 30453939 30453984 -59050569 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 2222 105 0 3 chr17 30454056 30454351 -59050202 - AluY SINE Alu -17 294 1 1610 173 10 23 chr17 30454882 30455182 -59049371 - AluJb SINE Alu -6 306 11 1719 167 10 26 chr17 30455239 30455544 -59049009 + AluJb SINE Alu 1 300 -12 881 177 38 0 chr17 30455773 30455931 -59048622 - AluSg/x SINE Alu -18 292 129 2417 86 0 13 chr17 30455931 30456245 -59048308 - AluSg SINE Alu 0 310 1 2418 81 0 0 chr17 30456925 30457222 -59047331 + AluY SINE Alu 1 297 -14 2042 124 0 3 chr17 30457228 30457508 -59047045 + AluSg SINE Alu 1 281 -29 180 0 0 0 chr17 30457508 30457528 -59047025 + (CAAAC)n Simple_repeat Simple_repeat 1 20 0 1942 127 0 27 chr17 30457547 30457846 -59046707 + AluSx SINE Alu 1 291 -21 1791 165 16 13 chr17 30458063 30458366 -59046187 + AluJo SINE Alu 4 307 -5 2262 95 0 16 chr17 30458371 30458687 -59045866 + AluY SINE Alu 1 311 0 540 185 108 0 chr17 30459366 30459496 -59045057 - L1ME4a LINE L1 0 6121 5978 2140 114 0 16 chr17 30459501 30459809 -59044744 - AluSx SINE Alu -5 307 5 1332 147 13 108 chr17 30459935 30460241 -59044312 + AluSx SINE Alu 12 288 -24 1685 132 0 98 chr17 30460912 30461131 -59043422 - AluY SINE Alu 0 311 149 2360 93 3 0 chr17 30461131 30461442 -59043111 - AluSp SINE Alu -1 312 1 1685 132 0 98 chr17 30461442 30461578 -59042975 - AluY SINE Alu -162 149 1 2170 110 0 0 chr17 30461669 30461982 -59042571 - AluSx SINE Alu 0 312 1 968 182 5 31 chr17 30462012 30462204 -59042349 + L1PB4 LINE L1 5968 6154 -2 8371 90 8 9 chr17 30462318 30463431 -59041122 - HERV9 LTR ERV1 -6126 2273 1162 324 335 50 105 chr17 30463551 30464106 -59040447 + L2 LINE L2 2719 3272 0 1954 132 20 20 chr17 30465362 30465657 -59038896 - AluJo SINE Alu -17 295 1 31 26 0 0 chr17 30465660 30465698 -59038855 + AT_rich Low_complexity Low_complexity 1 38 0 1190 93 0 0 chr17 30466108 30466259 -59038294 + AluSp/q SINE Alu 163 313 0 402 212 95 78 chr17 30466295 30466578 -59037975 - L1MC4a LINE L1 -1780 6028 5741 1201 210 93 3 chr17 30466581 30466872 -59037681 - L1MC4a LINE L1 -2166 5642 5326 2257 73 3 18 chr17 30466883 30467189 -59037364 - AluY SINE Alu 0 302 1 2300 99 3 0 chr17 30467205 30467489 -59037064 - AluSc SINE Alu -24 285 1 288 309 32 49 chr17 30467540 30467631 -59036922 + MIR SINE MIR 26 116 -146 2312 102 0 3 chr17 30467631 30467926 -59036627 - AluSc SINE Alu -15 294 1 288 309 32 49 chr17 30467926 30467957 -59036596 + MIR SINE MIR 116 146 -116 851 186 36 18 chr17 30468369 30468536 -59036017 + AluJo SINE Alu 120 289 -23 2167 107 28 3 chr17 30468651 30468941 -59035612 - AluSg SINE Alu -13 297 1 1470 148 27 70 chr17 30469015 30469346 -59035207 - L1MC1 LINE L1 -12 6321 6005 1179 20 34 7 chr17 30470261 30470408 -59034145 + L1PA13 LINE L1 6011 6161 -2 200 312 140 32 chr17 30471763 30471949 -59032604 - L2 LINE L2 -1314 2000 1795 538 85 0 0 chr17 30471953 30472035 -59032518 - AluSp/q SINE Alu -4 309 228 1024 189 6 0 chr17 30472200 30472369 -59032184 + FAM SINE Alu 1 170 -5 2291 90 10 13 chr17 30472372 30472672 -59031881 + AluSp SINE Alu 1 299 -14 528 194 105 144 chr17 30472674 30472803 -59031750 + L1MC4 LINE L1 7517 7650 -392 2005 122 40 16 chr17 30472803 30473106 -59031447 + AluJo SINE Alu 1 310 -2 2362 87 3 3 chr17 30473113 30473412 -59031141 + AluSq SINE Alu 1 299 -14 2032 133 35 0 chr17 30473415 30473700 -59030853 + AluSx SINE Alu 1 295 -17 528 194 105 144 chr17 30473700 30474017 -59030536 + L1MC4 LINE L1 7658 7957 -85 2217 107 0 3 chr17 30474206 30474497 -59030056 + AluSg SINE Alu 1 290 -20 596 286 79 20 chr17 30474562 30474814 -59029739 - L2 LINE L2 -8 3305 3039 295 288 61 38 chr17 30474816 30474948 -59029605 + MIR SINE MIR 80 214 -48 2491 66 3 3 chr17 30475279 30475582 -59028971 + AluY SINE Alu 1 303 -8 347 227 125 0 chr17 30475745 30475833 -59028720 - L2 LINE L2 -5 3267 3169 296 248 95 29 chr17 30476401 30476506 -59028047 + L2 LINE L2 3159 3270 -2 195 286 0 0 chr17 30476585 30476627 -59027926 + MIR SINE MIR 34 75 -133 2204 130 0 3 chr17 30476794 30477093 -59027460 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr17 30477701 30477723 -59026830 + AT_rich Low_complexity Low_complexity 1 22 0 2131 115 3 16 chr17 30477726 30478039 -59026514 + AluSg SINE Alu 1 309 -1 899 197 35 5 chr17 30478112 30478315 -59026238 - L1MB8 LINE L1 0 6178 5970 788 232 6 0 chr17 30478347 30478524 -59026029 - L1MB8 LINE L1 -445 5733 5556 2361 91 3 0 chr17 30478524 30478821 -59025732 - AluSq SINE Alu -15 298 1 28 0 0 0 chr17 30478829 30478857 -59025696 + AT_rich Low_complexity Low_complexity 1 28 0 334 280 155 16 chr17 30480128 30480321 -59024232 + L3b LINE CR1 1163 1382 -201 394 250 159 28 chr17 30480678 30480854 -59023699 - L3b LINE CR1 -68 1515 1317 1096 165 46 60 chr17 30481041 30481259 -59023294 + AluJb SINE Alu 46 260 -52 249 289 164 0 chr17 30481391 30481495 -59023058 + MER96 DNA MER1_type? 9 129 -46 2288 101 0 7 chr17 30481527 30481823 -59022730 - AluSg SINE Alu -16 294 1 1120 112 0 0 chr17 30481824 30481967 -59022586 - AluSq/x SINE Alu -170 143 1 391 315 62 15 chr17 30481985 30482115 -59022438 + L2 LINE L2 3136 3271 -1 2265 98 10 0 chr17 30482717 30483013 -59021540 + AluSq SINE Alu 1 299 -14 245 240 0 0 chr17 30483018 30483068 -59021485 + MER66B LTR ERV1 299 348 -138 590 158 0 0 chr17 30483307 30483402 -59021151 - AluSg/x SINE Alu -4 308 214 2317 64 43 0 chr17 30483410 30483692 -59020861 - AluY SINE Alu -17 294 1 2273 107 0 0 chr17 30483887 30484177 -59020376 + AluSg SINE Alu 1 290 -20 417 299 73 6 chr17 30485364 30485528 -59019025 + MIR SINE MIR 20 194 -68 969 246 144 50 chr17 30485795 30485851 -59018702 - LTR33 LTR ERVL -4 517 468 2243 74 33 0 chr17 30485851 30486158 -59018395 - AluSc SINE Alu 0 316 1 969 246 144 50 chr17 30486158 30486563 -59017990 - LTR33 LTR ERVL -53 468 10 1916 110 4 4 chr17 30486891 30487146 -59017407 + AluSq SINE Alu 1 255 -58 900 105 24 0 chr17 30487146 30487270 -59017283 + AluY SINE Alu 170 296 -15 229 288 104 24 chr17 30487280 30487405 -59017148 - MLT1L LTR MaLR -476 139 5 24 0 0 0 chr17 30488721 30488745 -59015808 + AT_rich Low_complexity Low_complexity 1 24 0 459 157 11 67 chr17 30488753 30488842 -59015711 - FLAM_A SINE Alu -41 101 18 549 103 0 0 chr17 30488980 30489058 -59015495 + U6 snRNA snRNA 1 78 -29 31 0 0 0 chr17 30489060 30489091 -59015462 + AT_rich Low_complexity Low_complexity 1 31 0 1606 106 0 5 chr17 30489472 30489679 -59014874 + AluSx SINE Alu 1 206 -106 234 164 18 0 chr17 30489772 30489827 -59014726 + L1ME3 LINE L1 5896 5951 -211 2615 43 7 3 chr17 30490307 30490610 -59013943 + AluY SINE Alu 1 304 -7 1661 145 33 40 chr17 30491837 30492121 -59012432 + AluJo SINE Alu 1 284 -28 477 0 0 0 chr17 30492121 30492174 -59012379 + (TG)n Simple_repeat Simple_repeat 2 54 0 1661 145 33 40 chr17 30492174 30492192 -59012361 + AluJo SINE Alu 284 301 -11 281 271 91 104 chr17 30492434 30492543 -59012010 - L1MC/D LINE L1 -1992 5816 5707 2245 119 0 3 chr17 30492543 30492853 -59011700 - AluSx SINE Alu -3 309 1 281 271 91 104 chr17 30492853 30492874 -59011679 - L1MC/D LINE L1 -2101 5707 5687 1985 147 6 10 chr17 30492874 30493187 -59011366 - AluJb SINE Alu 0 312 1 281 271 91 104 chr17 30493187 30493325 -59011228 - L1MC/D LINE L1 -2121 5687 5549 1626 137 60 4 chr17 30493325 30493574 -59010979 + AluSx SINE Alu 40 302 -10 281 271 91 104 chr17 30493574 30493753 -59010800 - L1MC/D LINE L1 -2259 5549 5373 23 0 0 0 chr17 30494840 30494863 -59009690 + AT_rich Low_complexity Low_complexity 1 23 0 2504 50 0 17 chr17 30494978 30495278 -59009275 + AluY SINE Alu 1 295 -16 2196 102 7 3 chr17 30495484 30495769 -59008784 + AluSg SINE Alu 1 286 -24 2423 71 0 7 chr17 30495835 30496152 -59008401 + AluSc SINE Alu 1 309 0 221 0 35 0 chr17 30502729 30502758 -59001795 + (TC)n Simple_repeat Simple_repeat 2 31 0 214 195 0 0 chr17 30504378 30504419 -59000134 + T-rich Low_complexity Low_complexity 1 41 0 818 229 21 54 chr17 30505903 30506077 -58998476 + MIR SINE MIR 1 166 -96 2251 118 0 13 chr17 30506077 30506391 -58998162 - AluSx SINE Alu -2 310 1 818 229 21 54 chr17 30506391 30506456 -58998097 + MIR SINE MIR 166 232 -30 309 271 140 9 chr17 30510627 30510734 -58993819 + MIR SINE MIR 20 140 -68 216 273 218 15 chr17 30514081 30514270 -58990283 + MIR SINE MIR 20 254 -8 478 287 44 11 chr17 30519616 30519797 -58984756 - MER117 DNA MER1_type -3 194 8 273 57 0 0 chr17 30520140 30520175 -58984378 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 499 236 32 8 chr17 30520175 30520298 -58984255 - L2 LINE L2 -13 3300 3175 2210 84 10 3 chr17 30520473 30520771 -58983782 - AluSx SINE Alu -12 300 1 718 250 35 6 chr17 30520787 30520959 -58983594 + MIR SINE MIR 16 192 -70 272 174 0 72 chr17 30520983 30521052 -58983501 + MIR SINE MIR 130 193 -69 531 289 254 3 chr17 30522095 30522410 -58982143 - L2 LINE L2 0 3313 2920 2044 130 0 16 chr17 30523600 30523915 -58980638 - AluSx SINE Alu 0 312 3 297 107 0 36 chr17 30523930 30523986 -58980567 - FAM SINE Alu 0 179 126 1102 126 0 0 chr17 30524324 30524475 -58980078 - AluSc SINE Alu -158 151 1 337 336 18 9 chr17 30524486 30524583 -58979970 - L1ME LINE L1 -301 5820 5720 1622 137 0 12 chr17 30524583 30524824 -58979729 - AluSx SINE Alu -11 301 64 337 336 18 9 chr17 30524824 30524836 -58979717 - L1ME LINE L1 -401 5720 5710 341 352 25 5 chr17 30524857 30525053 -58979500 - L1ME LINE L1 -2083 5725 5526 2013 138 0 25 chr17 30525235 30525554 -58978999 - AluSx SINE Alu -1 311 1 2055 143 0 6 chr17 30525716 30526030 -58978523 + AluJb SINE Alu 1 312 0 286 170 13 137 chr17 30526551 30526704 -58977849 + AluSq/x SINE Alu 3 136 -166 1000 161 11 11 chr17 30526849 30527023 -58977530 - AluJb SINE Alu -134 178 5 1817 123 0 105 chr17 30527143 30527485 -58977068 + AluSx SINE Alu 7 312 0 992 253 111 28 chr17 30528863 30529370 -58975183 + L1M4 LINE L1 4591 5139 -1007 2208 199 51 0 chr17 30529383 30529875 -58974678 - L1MB5 LINE L1 -1 6173 5657 4426 148 38 15 chr17 30529896 30530687 -58973866 - L1MA7 LINE L1 -12 6279 5471 1398 154 9 5 chr17 30530696 30530917 -58973636 - AluSg/x SINE Alu -20 292 71 2279 103 0 0 chr17 30530917 30531219 -58973334 - AluSq SINE Alu -11 302 1 518 181 0 11 chr17 30531219 30531313 -58973240 - MER2 DNA MER2_type -252 93 1 323 239 22 0 chr17 30531313 30531405 -58973148 + L1ME2 LINE L1 6050 6143 -21 316 350 34 60 chr17 30531907 30531937 -58972616 - HAL1 LINE L1 -1309 1198 1169 2300 83 6 13 chr17 30531937 30532251 -58972302 - AluSx SINE Alu 0 312 1 316 350 34 60 chr17 30532251 30532335 -58972218 - HAL1 LINE L1 -1338 1169 1084 1998 138 0 31 chr17 30532335 30532513 -58972040 - AluJb SINE Alu -3 309 144 2042 126 0 0 chr17 30532513 30532806 -58971747 - AluSx SINE Alu -15 297 5 1998 138 0 31 chr17 30532806 30532946 -58971607 - AluJb SINE Alu -168 144 1 316 350 34 60 chr17 30532946 30533064 -58971489 - HAL1 LINE L1 -1423 1084 971 2436 75 0 0 chr17 30533219 30533524 -58971029 - AluY SINE Alu -6 305 1 1633 184 14 0 chr17 30534193 30534475 -58970078 - AluJo SINE Alu -14 298 13 1779 167 0 13 chr17 30534585 30534884 -58969669 - AluJb SINE Alu -16 296 2 1344 162 9 123 chr17 30535197 30535537 -58969016 - AluJb SINE Alu -11 301 1 1493 176 58 3 chr17 30535537 30535884 -58968669 - L1MB4 LINE L1 -39 6141 5776 2047 85 4 7 chr17 30535885 30536156 -58968397 - AluSc SINE Alu -15 294 25 1120 138 11 11 chr17 30536303 30536484 -58968069 + AluJb SINE Alu 105 285 -27 330 330 22 0 chr17 30536485 30536576 -58967977 + L1MC4 LINE L1 6614 6706 -1336 1129 290 59 57 chr17 30536624 30537123 -58967430 + L1MEc LINE L1 159 656 -5740 2257 109 0 3 chr17 30537123 30537436 -58967117 + AluSx SINE Alu 1 312 0 1129 290 59 57 chr17 30537436 30537457 -58967096 + L1MEc LINE L1 656 675 -5721 1937 140 3 3 chr17 30537457 30537749 -58966804 + AluJb SINE Alu 1 292 -20 1129 290 59 57 chr17 30537749 30537906 -58966647 + L1MEc LINE L1 675 838 -5558 835 153 21 47 chr17 30537906 30538096 -58966457 + AluJb SINE Alu 122 306 -6 1489 244 60 101 chr17 30538096 30538426 -58966127 + L1MEc LINE L1 843 1185 -5211 1589 122 39 16 chr17 30538426 30538523 -58966030 + AluJo SINE Alu 23 116 -196 234 0 0 0 chr17 30538523 30538549 -58966004 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 1589 122 39 16 chr17 30538549 30538705 -58965848 + AluJo SINE Alu 116 282 -30 1489 244 60 101 chr17 30538705 30538816 -58965737 + L1MEc LINE L1 1185 1299 -5097 2219 106 3 6 chr17 30538816 30539127 -58965426 + AluSg SINE Alu 1 310 0 1489 244 60 101 chr17 30539127 30539164 -58965389 + L1MEc LINE L1 1299 1336 -5060 1284 224 173 43 chr17 30539164 30539552 -58965001 + MLT1D LTR MaLR 1 456 -49 2523 53 0 0 chr17 30539552 30539852 -58964701 - AluY SINE Alu -11 300 1 1284 224 173 43 chr17 30539852 30539909 -58964644 + MLT1D LTR MaLR 456 504 -1 1489 244 60 101 chr17 30539909 30540430 -58964123 + L1MEc LINE L1 1336 1803 -4593 2291 90 0 0 chr17 30540444 30540744 -58963809 + AluSx SINE Alu 1 300 -12 1803 142 27 3 chr17 30540749 30541045 -58963508 + AluJb SINE Alu 1 303 -9 768 274 138 73 chr17 30541061 30541792 -58962761 + HAL1 LINE L1 102 899 -1608 2596 45 0 0 chr17 30541792 30542103 -58962450 + AluY SINE Alu 1 311 0 768 274 138 73 chr17 30542103 30542233 -58962320 + HAL1 LINE L1 899 1019 -1488 702 303 98 25 chr17 30542405 30542722 -58961831 + L2 LINE L2 2448 2787 -527 461 272 283 25 chr17 30542768 30543051 -58961502 + L2 LINE L2 2958 3313 0 1978 134 3 16 chr17 30543130 30543436 -58961117 + AluJb SINE Alu 11 312 0 263 120 0 20 chr17 30543436 30543486 -58961067 + (GGGA)n Simple_repeat Simple_repeat 3 51 0 274 277 158 28 chr17 30543486 30543663 -58960890 + HAL1 LINE L1 2308 2507 0 31 26 0 0 chr17 30543664 30543702 -58960851 + AT_rich Low_complexity Low_complexity 1 38 0 205 274 32 16 chr17 30546728 30546790 -58957763 + L2 LINE L2 3186 3248 -65 25 90 0 0 chr17 30548175 30548242 -58956311 + GC_rich Low_complexity Low_complexity 1 67 0 26 0 0 0 chr17 30548383 30548409 -58956144 + GC_rich Low_complexity Low_complexity 1 26 0 267 163 48 48 chr17 30548429 30548595 -58955958 + (CGCGG)n Simple_repeat Simple_repeat 5 170 0 33 85 0 0 chr17 30548698 30548780 -58955773 + GC_rich Low_complexity Low_complexity 1 82 0 271 285 133 46 chr17 30549663 30549814 -58954739 + MIR SINE MIR 28 191 -71 30 45 0 0 chr17 30552264 30552308 -58952245 + GC_rich Low_complexity Low_complexity 1 44 0 253 209 27 45 chr17 30552383 30552493 -58952060 + (CGGG)n Simple_repeat Simple_repeat 4 111 0 47 53 0 0 chr17 30552498 30552573 -58951980 + GC_rich Low_complexity Low_complexity 1 75 0 33 66 0 0 chr17 30552668 30552729 -58951824 + GC_rich Low_complexity Low_complexity 1 61 0 271 363 48 30 chr17 30554181 30554349 -58950204 + MIR3 SINE MIR 38 208 0 266 311 22 33 chr17 30554592 30554682 -58949871 + L2 LINE L2 3170 3258 -14 659 228 35 53 chr17 30555443 30555552 -58949001 - L1ME3 LINE L1 -7 6155 6046 1345 97 46 84 chr17 30555552 30555790 -58948763 + MER30 DNA MER1_type 2 230 0 659 228 35 53 chr17 30555790 30555908 -58948645 - L1ME3 LINE L1 -116 6046 5932 512 16 0 0 chr17 30556968 30557031 -58947522 + AluY SINE Alu 239 301 -9 248 316 0 0 chr17 30557647 30557723 -58946830 + MIR SINE MIR 58 133 -129 226 321 82 37 chr17 30558205 30558339 -58946214 + MIR SINE MIR 122 261 -1 333 234 0 90 chr17 30558701 30558812 -58945741 + MIR3 SINE MIR 61 161 -47 450 240 0 25 chr17 30559495 30559616 -58944937 + MIR SINE MIR 51 168 -94 2361 66 6 22 chr17 30560912 30561229 -58943324 + AluSp SINE Alu 1 312 -1 512 313 43 19 chr17 30561744 30561952 -58942601 - L2 LINE L2 -5 3267 3055 494 268 87 0 chr17 30562113 30562251 -58942302 + MIR SINE MIR 65 214 -48 1569 139 91 15 chr17 30562253 30562527 -58942026 - AluJo SINE Alu -17 295 1 295 343 96 0 chr17 30562578 30562724 -58941829 - L2 LINE L2 -565 2749 2590 1259 68 43 0 chr17 30571472 30571634 -58932919 - AluSc SINE Alu -15 294 126 270 0 0 0 chr17 30571634 30571664 -58932889 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1775 95 25 104 chr17 30571668 30571985 -58932568 - AluYb8 SINE Alu -26 292 1 228 35 0 0 chr17 30572384 30572413 -58932140 + (TA)n Simple_repeat Simple_repeat 1 29 0 2189 85 39 0 chr17 30572413 30572691 -58931862 - AluSx SINE Alu -21 291 3 22 35 0 0 chr17 30573743 30573772 -58930781 + AT_rich Low_complexity Low_complexity 1 29 0 189 0 0 0 chr17 30574533 30574554 -58929999 + (CAAAA)n Simple_repeat Simple_repeat 4 24 0 23 0 0 0 chr17 30575807 30575830 -58928723 + AT_rich Low_complexity Low_complexity 1 23 0 188 197 0 16 chr17 30578010 30578071 -58926482 + (CATA)n Simple_repeat Simple_repeat 3 62 0 183 42 0 0 chr17 30580178 30580202 -58924351 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 303 28 0 0 chr17 30581108 30581144 -58923409 - U2 snRNA snRNA -152 36 1 215 271 0 0 chr17 30581454 30581502 -58923051 + (TA)n Simple_repeat Simple_repeat 2 49 0 1121 131 5 26 chr17 30582367 30582558 -58921995 - L1PB4 LINE L1 -2 6154 5968 2367 93 0 3 chr17 30582588 30582899 -58921654 + AluY SINE Alu 1 310 -1 1236 109 0 6 chr17 30582915 30583089 -58921464 + AluSg/x SINE Alu 123 295 -17 843 229 36 52 chr17 30583417 30583638 -58920915 - MIR SINE MIR -11 251 33 2420 68 0 0 chr17 30583638 30583932 -58920621 - AluY SINE Alu -17 294 1 843 229 36 52 chr17 30583932 30583959 -58920594 - MIR SINE MIR -229 33 7 2267 120 0 0 chr17 30584843 30585144 -58919409 + AluSx SINE Alu 1 301 -11 2474 76 3 0 chr17 30585432 30585735 -58918818 - AluY SINE Alu -7 304 1 2326 78 7 0 chr17 30587143 30587461 -58917092 - AluSp SINE Alu 0 320 1 552 130 0 0 chr17 30587461 30587538 -58917015 - AluSp/q SINE Alu -17 296 220 2230 109 0 26 chr17 30587694 30587997 -58916556 + AluSx SINE Alu 1 295 -17 2159 123 10 3 chr17 30588280 30588582 -58915971 - AluSx SINE Alu -3 309 6 2113 137 6 6 chr17 30588601 30588914 -58915639 - AluSq SINE Alu 0 313 1 297 98 0 0 chr17 30588943 30588984 -58915569 + AluJo/FLAM SINE Alu 86 126 -176 337 111 0 0 chr17 30588986 30589040 -58915513 + FAM SINE Alu 126 179 0 1994 134 7 0 chr17 30589047 30589337 -58915216 + AluSc SINE Alu 1 292 -17 1229 143 21 149 chr17 30589339 30589675 -58914878 + AluJb SINE Alu 1 293 -9 2216 112 7 0 chr17 30590262 30590547 -58914006 - AluSx SINE Alu -25 287 1 2314 125 0 0 chr17 30590757 30591068 -58913485 + AluSx SINE Alu 1 311 -1 1716 172 10 23 chr17 30591159 30591461 -58913092 - AluJo SINE Alu -3 309 12 741 212 0 0 chr17 30591508 30591640 -58912913 + FLAM_C SINE Alu 2 133 0 1940 181 0 9 chr17 30591649 30591784 -58912769 + AluJo SINE Alu 1 136 -176 2186 102 20 3 chr17 30591784 30592077 -58912476 + AluSx SINE Alu 1 298 -14 1940 181 0 9 chr17 30592077 30592256 -58912297 + AluJo SINE Alu 136 312 0 2717 32 0 19 chr17 30593162 30593474 -58911079 - AluY SINE Alu -5 306 1 210 37 0 0 chr17 30593479 30593506 -58911047 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 848 141 0 8 chr17 30593506 30593634 -58910919 - AluSg/x SINE Alu -32 280 154 1918 132 42 0 chr17 30593736 30594024 -58910529 + AluSx SINE Alu 1 300 -12 200 254 9 26 chr17 30595198 30595312 -58909241 + (CCCG)n Simple_repeat Simple_repeat 2 113 0 27 62 0 0 chr17 30596472 30596520 -58908033 + GC_rich Low_complexity Low_complexity 1 48 0 23 68 0 0 chr17 30596779 30596823 -58907730 + GC_rich Low_complexity Low_complexity 1 44 0 28 71 0 0 chr17 30596859 30596915 -58907638 + GC_rich Low_complexity Low_complexity 1 56 0 1875 157 3 14 chr17 30598318 30598612 -58905941 + AluJo SINE Alu 1 291 -21 27 0 0 0 chr17 30598652 30598679 -58905874 + AT_rich Low_complexity Low_complexity 1 27 0 1853 146 10 17 chr17 30598682 30598976 -58905577 - AluSx SINE Alu -20 292 1 635 181 0 51 chr17 30598977 30599115 -58905438 - AluJ SINE Alu -16 296 166 1260 189 0 0 chr17 30599186 30599377 -58905176 - AluJ SINE Alu -121 191 1 366 251 36 119 chr17 30599958 30600056 -58904497 - Charlie8 DNA MER1_type -131 210 106 2317 85 0 0 chr17 30600056 30600369 -58904184 - AluSc SINE Alu 0 313 1 210 37 0 0 chr17 30600376 30600403 -58904150 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1625 150 29 25 chr17 30600410 30600684 -58903869 - AluJb SINE Alu -37 275 1 366 251 36 119 chr17 30600684 30600787 -58903766 - Charlie8 DNA MER1_type -247 94 10 2517 82 0 0 chr17 30602995 30603299 -58901254 + AluY SINE Alu 1 304 -7 1381 167 18 0 chr17 30604189 30604416 -58900137 + AluJb SINE Alu 1 231 -81 1544 156 80 43 chr17 30604573 30604874 -58899679 + AluJb SINE Alu 1 312 0 2464 93 3 0 chr17 30605195 30605506 -58899047 + AluSp SINE Alu 1 312 -1 704 164 19 6 chr17 30605515 30605674 -58898879 + GA-rich Low_complexity Low_complexity 3 163 0 2062 163 0 0 chr17 30605680 30605981 -58898572 + AluJb SINE Alu 1 301 -11 242 306 100 38 chr17 30606361 30606521 -58898032 + L3 LINE CR1 1401 1570 -7 889 197 0 0 chr17 30606695 30606847 -58897706 - AluJb SINE Alu -17 295 144 1855 165 0 14 chr17 30606863 30607169 -58897384 - AluJb SINE Alu 0 303 2 2394 64 40 0 chr17 30607236 30607532 -58897021 - AluY SINE Alu -3 308 1 194 286 121 50 chr17 30608076 30608216 -58896337 + MIR SINE MIR 49 198 -64 200 283 117 0 chr17 30608557 30608617 -58895936 - MIR SINE MIR -95 113 47 266 184 158 26 chr17 30608764 30608840 -58895713 - MER91C DNA MER1_type -35 105 20 2195 129 3 0 chr17 30609027 30609322 -58895231 - AluSx SINE Alu -16 296 1 680 184 0 24 chr17 30609451 30609576 -58894977 - FLAM_A SINE Alu -8 125 4 186 138 138 69 chr17 30609649 30609675 -58894878 + MIR SINE MIR 46 69 -193 1762 181 0 21 chr17 30609675 30609962 -58894591 - AluJb SINE Alu -31 281 1 186 138 138 69 chr17 30609962 30609993 -58894560 + MIR SINE MIR 69 107 -155 1026 135 18 0 chr17 30610102 30610272 -58894281 - AluY SINE Alu -3 308 136 208 83 0 56 chr17 30610312 30610319 -58894234 + (TTTTC)n Simple_repeat Simple_repeat 2 8 -27 1996 145 10 10 chr17 30610319 30610630 -58893923 + AluSx SINE Alu 1 311 -1 208 83 0 56 chr17 30610630 30610658 -58893895 + (TTTTC)n Simple_repeat Simple_repeat 8 35 0 2642 33 0 20 chr17 30611811 30612115 -58892438 - AluY SINE Alu -13 298 1 183 42 0 0 chr17 30612123 30612147 -58892406 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2241 77 40 10 chr17 30612933 30613230 -58891323 - AluSg SINE Alu -4 306 1 305 268 179 8 chr17 30613397 30613520 -58891033 - MIR SINE MIR -26 236 93 233 29 0 29 chr17 30613552 30613587 -58890966 + (TC)n Simple_repeat Simple_repeat 1 34 0 1876 138 0 24 chr17 30613594 30613883 -58890670 - AluJo SINE Alu -30 282 1 182 280 60 0 chr17 30616180 30616230 -58888323 + MIR SINE MIR 93 145 -63 2019 137 10 3 chr17 30616247 30616553 -58888000 + AluSx SINE Alu 1 308 -4 2282 90 0 57 chr17 30616715 30617047 -58887506 + AluSq SINE Alu 1 313 0 357 254 62 15 chr17 30617050 30617180 -58887373 + MER103 DNA DNA 2 137 -29 2471 68 0 0 chr17 30618281 30618588 -58885965 - AluY SINE Alu -4 307 1 1026 188 140 0 chr17 30618670 30618877 -58885676 - AluJo SINE Alu -76 236 1 1877 135 38 3 chr17 30618926 30619214 -58885339 + AluSx SINE Alu 1 298 -14 2378 79 7 0 chr17 30619617 30619920 -58884633 - AluSp SINE Alu -8 305 1 1981 145 7 3 chr17 30619970 30620274 -58884279 - AluSx SINE Alu -7 305 1 2246 92 7 3 chr17 30620318 30620622 -58883931 - AluSq SINE Alu -8 305 1 1789 157 7 10 chr17 30620957 30621251 -58883302 + AluJb SINE Alu 11 303 -9 973 179 77 77 chr17 30622086 30622450 -58882103 + MLT1A1 LTR MaLR 3 428 -4 22 35 0 0 chr17 30622960 30622989 -58881564 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr17 30623020 30623055 -58881498 + AT_rich Low_complexity Low_complexity 1 35 0 244 176 44 15 chr17 30623545 30623613 -58880940 - L1MD3 LINE L1 0 7995 7926 2207 133 0 0 chr17 30623614 30623916 -58880637 - AluJb SINE Alu -10 302 1 480 261 24 29 chr17 30623934 30624141 -58880412 - L1MC4 LINE L1 -150 7892 7687 314 247 35 0 chr17 30624166 30624251 -58880302 - L1M4 LINE L1 -2735 3411 3324 436 221 52 0 chr17 30624255 30624391 -58880162 - L1M4 LINE L1 -2959 3187 3045 1012 190 112 72 chr17 30624405 30624522 -58880031 - MER2 DNA MER2_type -2 343 232 2117 104 3 7 chr17 30624522 30624843 -58879710 - AluSp SINE Alu 0 320 1 1012 190 112 72 chr17 30624843 30625045 -58879508 - MER2 DNA MER2_type -113 232 10 1113 242 28 3 chr17 30625060 30625349 -58879204 - L1MC4 LINE L1 -509 7533 7238 1513 200 214 16 chr17 30625351 30625855 -58878698 - L1MC4 LINE L1 -958 7084 6481 2383 100 10 0 chr17 30625856 30626165 -58878388 - AluSx SINE Alu 0 312 1 2002 136 3 17 chr17 30626485 30626786 -58877767 - AluSx SINE Alu -15 297 1 1969 147 0 10 chr17 30626827 30627120 -58877433 - AluJo SINE Alu -14 298 9 1638 208 0 7 chr17 30627483 30627777 -58876776 - AluJo SINE Alu -20 292 1 26 74 0 0 chr17 30627847 30627901 -58876652 + AT_rich Low_complexity Low_complexity 1 54 0 2049 115 0 43 chr17 30628242 30628547 -58876006 + AluSx SINE Alu 16 307 -5 277 187 66 44 chr17 30628567 30628658 -58875895 - MER3 DNA MER1_type 0 209 117 1800 177 0 0 chr17 30629758 30630058 -58874495 + AluJb SINE Alu 5 304 -8 278 235 0 88 chr17 30630270 30630372 -58874181 + MER31A LTR ERV1 353 445 -40 26 30 0 0 chr17 30630375 30630408 -58874145 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr17 30630948 30630978 -58873575 + AT_rich Low_complexity Low_complexity 1 30 0 2180 95 0 3 chr17 30631131 30631455 -58873098 - AluSx SINE Alu 0 323 1 1448 164 36 75 chr17 30632300 30632605 -58871948 - AluJb SINE Alu -17 295 3 321 310 132 11 chr17 30632713 30632782 -58871771 + L1ME4a LINE L1 5687 5746 -375 2404 87 3 0 chr17 30632782 30633081 -58871472 + AluSg SINE Alu 1 300 -10 321 310 132 11 chr17 30633081 30633185 -58871368 + L1ME4a LINE L1 5746 5881 -240 1812 144 7 20 chr17 30633930 30634229 -58870324 + AluJb SINE Alu 5 299 -13 1792 108 8 4 chr17 30634257 30634508 -58870045 + AluSx SINE Alu 46 297 -15 1106 149 37 9 chr17 30634509 30634723 -58869830 - Charlie1 DNA MER1_type -808 1953 1734 2334 113 0 3 chr17 30634820 30635130 -58869423 - AluSx SINE Alu -3 309 1 1942 124 0 78 chr17 30636556 30636878 -58867675 - AluSx SINE Alu -15 297 1 406 351 24 6 chr17 30636944 30637109 -58867444 + MIR3 SINE MIR 36 203 -5 35 41 0 0 chr17 30638080 30638129 -58866424 + AT_rich Low_complexity Low_complexity 1 49 0 35 0 0 0 chr17 30638216 30638251 -58866302 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr17 30638353 30638381 -58866172 + AT_rich Low_complexity Low_complexity 1 28 0 851 216 138 16 chr17 30638490 30638573 -58865980 - MER2 DNA MER2_type -1 343 271 2258 109 0 13 chr17 30638573 30638885 -58865668 + AluY SINE Alu 1 308 -3 851 216 138 16 chr17 30638885 30639106 -58865447 - MER2 DNA MER2_type -73 271 2 538 228 94 8 chr17 30639149 30639276 -58865277 - MIR SINE MIR -20 242 105 1477 190 0 0 chr17 30640183 30640425 -58864128 - AluJb SINE Alu -35 277 36 22 35 0 0 chr17 30640449 30640478 -58864075 + AT_rich Low_complexity Low_complexity 1 29 0 2259 98 3 7 chr17 30640479 30640785 -58863768 + AluSc SINE Alu 1 305 -4 11344 128 50 81 chr17 30640798 30641683 -58862870 + Tigger1 DNA MER2_type 1 911 -1507 2060 125 3 28 chr17 30641683 30642002 -58862551 + AluSx SINE Alu 1 311 -1 11344 128 50 81 chr17 30642002 30642105 -58862448 + Tigger1 DNA MER2_type 911 1016 -1402 686 144 36 0 chr17 30642105 30642216 -58862337 - AluSg/x SINE Alu -12 298 184 11344 128 50 81 chr17 30642216 30642231 -58862322 + Tigger1 DNA MER2_type 1016 1030 -1388 829 143 0 30 chr17 30642231 30642364 -58862189 - FLAM_C SINE Alu -4 129 1 11344 128 50 81 chr17 30642364 30642842 -58861711 + Tigger1 DNA MER2_type 1030 1521 -897 2209 106 6 3 chr17 30642842 30643153 -58861400 + AluSp SINE Alu 1 312 -1 2269 101 3 3 chr17 30643162 30643459 -58861094 + AluSx SINE Alu 1 297 -15 11344 128 50 81 chr17 30643459 30644139 -58860414 + Tigger1 DNA MER2_type 1529 2213 -205 2413 75 7 3 chr17 30644139 30644446 -58860107 + AluSc SINE Alu 1 308 -1 11344 128 50 81 chr17 30644446 30644539 -58860014 + Tigger1 DNA MER2_type 2213 2307 -111 615 177 0 0 chr17 30644553 30644649 -58859904 - AluSg/x SINE Alu -25 285 190 1628 108 0 14 chr17 30644652 30644875 -58859678 - AluSq SINE Alu -93 220 1 676 171 8 0 chr17 30644875 30644992 -58859561 + Tigger1 DNA MER2_type 2300 2417 -1 252 119 0 0 chr17 30645179 30645221 -58859332 - L1MB7 LINE L1 -11 6173 6132 244 299 52 31 chr17 30645523 30645620 -58858933 + MER5A DNA MER1_type 40 138 -51 1961 143 82 12 chr17 30646008 30646408 -58858145 + L1MB3 LINE L1 5754 6181 -2 22 0 0 0 chr17 30646460 30646482 -58858071 + AT_rich Low_complexity Low_complexity 1 22 0 747 129 0 9 chr17 30646500 30646616 -58857937 - FLAM_C SINE Alu -17 116 2 2161 122 0 3 chr17 30646868 30647163 -58857390 + AluSx SINE Alu 1 294 -18 2274 102 3 10 chr17 30647280 30647594 -58856959 + AluSx SINE Alu 1 312 0 2062 130 0 11 chr17 30647605 30647928 -58856625 + AluSx SINE Alu 1 320 0 284 256 16 74 chr17 30647951 30648072 -58856481 + L1ME3A LINE L1 6019 6132 -38 2477 54 3 0 chr17 30648160 30648454 -58856099 + AluY SINE Alu 1 295 -16 505 283 137 57 chr17 30648784 30649288 -58855265 + L1M4 LINE L1 3249 3814 -2332 1997 133 25 0 chr17 30649288 30649574 -58854979 + AluSx SINE Alu 1 293 -19 505 283 137 57 chr17 30649574 30649769 -58854784 + L1M4 LINE L1 3814 3992 -2154 243 0 0 0 chr17 30649867 30649894 -58854659 + (A)n Simple_repeat Simple_repeat 1 27 0 180 273 0 0 chr17 30650201 30650245 -58854308 + MIR SINE MIR 217 260 -2 357 221 79 16 chr17 30650298 30650425 -58854128 + L1ME4a LINE L1 5957 6091 -30 523 270 67 29 chr17 30650635 30650712 -58853841 - MIR SINE MIR -39 223 150 2364 96 0 3 chr17 30650712 30651014 -58853539 - AluSq SINE Alu -12 301 1 523 270 67 29 chr17 30651014 30651150 -58853403 - MIR SINE MIR -112 150 8 1744 181 3 22 chr17 30651217 30651532 -58853021 - AluJb SINE Alu -3 309 1 1760 109 71 24 chr17 30652302 30652596 -58851957 - MER1B DNA MER1_type 0 339 32 315 131 20 30 chr17 30653183 30653282 -58851271 - MER63 DNA MER1_type -100 960 863 2116 109 0 0 chr17 30653305 30653580 -58850973 - AluSx SINE Alu -37 275 1 1909 153 0 13 chr17 30653584 30653891 -58850662 - AluJb SINE Alu -9 303 1 504 307 35 20 chr17 30704939 30705141 -58799412 + L2 LINE L2 3109 3313 0 2176 28 4 4 chr17 30705940 30706191 -58798362 + AluY SINE Alu 1 251 -60 338 246 61 104 chr17 30706384 30706513 -58798040 - L1ME4a LINE L1 -55 6066 5933 327 65 0 0 chr17 30706513 30706559 -58797994 + (TG)n Simple_repeat Simple_repeat 2 47 0 338 246 61 104 chr17 30706559 30706709 -58797844 - L1ME4a LINE L1 -188 5933 5799 2370 81 3 3 chr17 30707055 30707353 -58797200 - AluSp SINE Alu -13 300 3 1247 137 5 0 chr17 30707440 30707630 -58796923 - AluSg/x SINE Alu -5 305 115 193 316 53 13 chr17 30707700 30707776 -58796777 + L3b LINE CR1 1398 1476 -107 290 318 155 47 chr17 30708115 30708495 -58796058 + L2 LINE L2 485 905 -2409 2428 100 0 0 chr17 30708536 30708846 -58795707 - AluSx SINE Alu 0 312 3 2487 85 0 0 chr17 30708921 30709226 -58795327 - AluY SINE Alu -6 305 1 214 375 8 8 chr17 30709577 30709705 -58794848 + L2 LINE L2 1290 1417 -1897 2213 123 0 0 chr17 30711152 30711444 -58793109 - AluSx SINE Alu -20 292 1 721 268 96 13 chr17 30711544 30711783 -58792770 + MIR SINE MIR 4 262 0 288 0 0 0 chr17 30711785 30711817 -58792736 + (TC)n Simple_repeat Simple_repeat 2 33 0 279 0 0 0 chr17 30711816 30711847 -58792706 + (TA)n Simple_repeat Simple_repeat 2 32 0 * 2329 99 0 6 chr17 30712221 30712533 -58792020 - AluSx SINE Alu -1 311 2 1985 118 17 24 chr17 30713655 30713952 -58790601 - AluSx SINE Alu -17 295 1 1112 154 80 5 chr17 30714142 30714343 -58790210 + AluSq SINE Alu 83 298 -15 2202 110 0 3 chr17 30714517 30714818 -58789735 + AluSc SINE Alu 1 300 -9 2267 79 10 26 chr17 30715854 30716158 -58788395 + AluSx SINE Alu 2 300 -12 1961 122 7 36 chr17 30716158 30716462 -58788091 + AluSx SINE Alu 1 295 -17 336 360 0 18 chr17 30716505 30716616 -58787937 + L2 LINE L2 3150 3258 -14 2373 93 3 3 chr17 30716678 30716989 -58787564 + AluSp SINE Alu 1 311 -2 2041 124 3 29 chr17 30718583 30718945 -58785608 - MER4A LTR ERV1 -2 662 252 227 74 0 0 chr17 30718951 30718978 -58785575 + MER4A LTR ERV1 148 174 -490 * 854 110 69 58 chr17 30718954 30719127 -58785426 - MER4A LTR ERV1 -489 175 1 2210 103 7 0 chr17 30719222 30719524 -58785029 + AluSx SINE Alu 1 304 0 359 258 11 21 chr17 30719557 30719650 -58784903 - MIR SINE MIR -82 126 35 2202 116 0 3 chr17 30719754 30720056 -58784497 + AluSg SINE Alu 1 301 -9 21 0 0 0 chr17 30721171 30721192 -58783361 + AT_rich Low_complexity Low_complexity 1 21 0 220 209 0 0 chr17 30721298 30721341 -58783212 - L2 LINE L2 -10 3303 3261 699 235 50 22 chr17 30721363 30721542 -58783011 + MER5A DNA MER1_type 6 189 0 1705 138 50 0 chr17 30721571 30721831 -58782722 - AluJb SINE Alu -35 277 5 23 33 0 0 chr17 30721881 30721911 -58782642 + AT_rich Low_complexity Low_complexity 1 30 0 2172 128 0 0 chr17 30721911 30722199 -58782354 - AluSx SINE Alu -24 288 1 27 49 0 0 chr17 30722280 30722321 -58782232 + AT_rich Low_complexity Low_complexity 1 41 0 238 313 60 66 chr17 30722351 30722533 -58782020 + L2 LINE L2 2577 2757 -557 1349 91 162 0 chr17 30722589 30722787 -58781766 - MER30 DNA MER1_type 0 230 1 237 242 15 15 chr17 30722829 30722895 -58781658 - Charlie8 DNA MER1_type -1930 487 422 2236 98 0 0 chr17 30722976 30723261 -58781292 + AluSg SINE Alu 1 285 -25 275 250 33 0 chr17 30723334 30723394 -58781159 - Charlie8 DNA MER1_type -2353 64 3 241 213 72 15 chr17 30723549 30723635 -58780918 - MIR SINE MIR -73 135 37 312 164 33 0 chr17 30724671 30724732 -58779821 - Alu SINE Alu 0 301 239 315 0 0 0 chr17 30724749 30724760 -58779793 + (CA)n Simple_repeat Simple_repeat 1 46 0 315 0 0 0 chr17 30724760 30724795 -58779758 + (CA)n Simple_repeat Simple_repeat 2 36 0 304 247 56 0 chr17 30724867 30724956 -58779597 + L1MC4 LINE L1 6614 6707 -1335 285 172 0 0 chr17 30724956 30725020 -58779533 + (TA)n Simple_repeat Simple_repeat 2 65 0 753 190 0 0 chr17 30725129 30725250 -58779303 - AluJb SINE Alu -190 122 2 2057 153 0 0 chr17 30725294 30725588 -58778965 + AluSx SINE Alu 1 294 -18 2047 119 0 3 chr17 30725595 30725903 -58778650 + AluSx SINE Alu 1 307 0 213 270 0 32 chr17 30725957 30726020 -58778533 - L2 LINE L2 -2 3311 3251 2051 117 13 3 chr17 30726469 30726769 -58777784 - AluSx SINE Alu -9 303 1 2253 101 0 13 chr17 30726804 30727102 -58777451 - AluSx SINE Alu -18 294 1 651 234 234 19 chr17 30727135 30727340 -58777213 + MIR SINE MIR 13 261 -1 1799 174 7 16 chr17 30727644 30727954 -58776599 + AluJo SINE Alu 3 309 -3 913 282 77 16 chr17 30728165 30728488 -58776065 + L2 LINE L2 2274 2616 -698 400 222 86 56 chr17 30728511 30728673 -58775880 - L1MC5 LINE L1 -37 7924 7758 464 294 64 38 chr17 30728687 30728922 -58775631 + L2 LINE L2 2619 2859 -455 635 186 132 0 chr17 30729467 30729596 -58774957 + FRAM SINE Alu 25 170 -6 3150 135 18 29 chr17 30729764 30730311 -58774242 + L1MB7 LINE L1 5635 6175 -9 1711 174 3 35 chr17 30730415 30730726 -58773827 - AluJb SINE Alu -9 303 3 1284 119 6 0 chr17 30732723 30732900 -58771653 - AluSg/x SINE Alu -14 296 119 231 265 67 114 chr17 30733027 30733370 -58771183 + L2 LINE L2 1791 2117 -1197 492 246 158 6 chr17 30733376 30733421 -58771132 + Charlie8 DNA MER1_type 41 78 -2339 1674 200 0 3 chr17 30733421 30733711 -58770842 - AluJb SINE Alu -23 289 1 492 246 158 6 chr17 30733711 30733836 -58770717 + Charlie8 DNA MER1_type 78 237 -2180 439 296 48 48 chr17 30733836 30734025 -58770528 - L2 LINE L2 -174 3139 2951 747 157 0 0 chr17 30734029 30734131 -58770422 + FLAM_A SINE Alu 1 102 -40 463 317 12 6 chr17 30734149 30734310 -58770243 - L2 LINE L2 -353 2961 2800 541 299 147 34 chr17 30734376 30734654 -58769899 + L2 LINE L2 1913 2241 -1073 2784 207 62 8 chr17 30734654 30734809 -58769744 - MLT1F LTR MaLR -2 540 395 1751 97 0 0 chr17 30734809 30735035 -58769518 + AluY SINE Alu 83 308 -3 2784 207 62 8 chr17 30735035 30735391 -58769162 - MLT1F LTR MaLR -147 395 1 541 299 147 34 chr17 30735391 30735467 -58769086 + L2 LINE L2 2241 2307 -1007 1183 124 0 17 chr17 30735642 30735819 -58768734 + AluSg/x SINE Alu 137 310 -2 462 274 122 46 chr17 30735834 30736031 -58768522 - MIR SINE MIR -5 257 46 2298 114 0 7 chr17 30736031 30736338 -58768215 - AluSq SINE Alu -8 305 1 203 133 0 0 chr17 30737029 30737059 -58767494 + (GGA)n Simple_repeat Simple_repeat 1 30 0 2329 88 3 3 chr17 30738278 30738575 -58765978 + AluSg1 SINE Alu 1 297 -12 2301 98 0 3 chr17 30740530 30740836 -58763717 + AluSx SINE Alu 1 305 -7 4565 44 2 18 chr17 30740843 30741391 -58763162 + L1PA8 LINE L1 5628 6166 -6 220 224 276 40 chr17 30741416 30741568 -58762985 - L2 LINE L2 -121 3192 3005 317 273 142 79 chr17 30741659 30742047 -58762506 - L2 LINE L2 -261 3011 2564 1202 138 15 10 chr17 30743169 30743365 -58761188 + L1MA3 LINE L1 4016 4212 -1934 1016 128 0 0 chr17 30743365 30743513 -58761040 + AluSq/x SINE Alu 1 148 -165 511 169 0 0 chr17 30743513 30743590 -58760963 - AluY SINE Alu -237 81 5 6972 128 14 31 chr17 30743591 30745503 -58759050 + L1MA3 LINE L1 4209 6153 -152 1598 164 36 11 chr17 30745503 30745777 -58758776 + AluJb SINE Alu 1 281 -31 6972 128 14 31 chr17 30745777 30745899 -58758654 + L1MA3 LINE L1 6153 6212 -93 2040 154 0 10 chr17 30745899 30746205 -58758348 - AluJb SINE Alu -9 303 1 6972 128 14 31 chr17 30746205 30746293 -58758260 + L1MA3 LINE L1 6212 6300 -5 22 56 0 0 chr17 30746294 30746330 -58758223 + AT_rich Low_complexity Low_complexity 1 36 0 210 343 171 0 chr17 30746631 30746736 -58757817 + MIR3 SINE MIR 11 133 -75 2024 103 0 0 chr17 30746878 30747199 -58757354 - AluSx SINE Alu 0 343 23 271 253 55 21 chr17 30747563 30747660 -58756893 + MIR SINE MIR 65 164 -67 2173 107 0 38 chr17 30749368 30749686 -58754867 - AluSg SINE Alu -4 306 1 2224 113 3 3 chr17 30750880 30751181 -58753372 + AluSx SINE Alu 1 301 -11 1984 125 7 0 chr17 30751300 30751581 -58752972 + AluSx SINE Alu 21 303 -9 2435 87 0 7 chr17 30751971 30752281 -58752272 + AluSc SINE Alu 1 308 -1 2628 62 0 0 chr17 30752283 30752590 -58751963 + AluY SINE Alu 1 307 -4 431 241 245 14 chr17 30752756 30752972 -58751581 + L2 LINE L2 3044 3309 -4 261 302 170 19 chr17 30753024 30753130 -58751423 + MIR SINE MIR 23 144 -64 216 0 0 0 chr17 30753386 30753410 -58751143 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 4824 44 7 0 chr17 30753410 30753958 -58750595 - L1PA5 LINE L1 -13 6141 5590 194 262 0 0 chr17 30753958 30754000 -58750553 + MIR SINE MIR 89 130 -78 2484 74 0 3 chr17 30754009 30754319 -58750234 - AluY SINE Alu -2 309 1 242 284 0 25 chr17 30754319 30754400 -58750153 + MIR SINE MIR 112 190 -72 547 222 139 0 chr17 30754741 30754885 -58749668 + MER45A DNA AcHobo 15 178 0 22 35 0 0 chr17 30756645 30756674 -58747879 + AT_rich Low_complexity Low_complexity 1 29 0 695 280 83 36 chr17 30756684 30757060 -58747493 + L1ME4a LINE L1 5514 5907 -214 1984 122 10 7 chr17 30757076 30757379 -58747174 - AluSq SINE Alu -9 304 1 2113 127 10 3 chr17 30757389 30757696 -58746857 - AluY SINE Alu 0 311 3 180 97 0 0 chr17 30757726 30757757 -58746796 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1680 179 0 47 chr17 30757778 30758096 -58746457 - AluJo SINE Alu -7 305 3 2214 98 3 3 chr17 30758104 30758399 -58746154 - AluSx SINE Alu -17 295 1 1716 153 62 0 chr17 30758399 30758673 -58745880 - AluSx SINE Alu -15 297 7 282 116 0 0 chr17 30759353 30759396 -58745157 + (T)n Simple_repeat Simple_repeat 1 43 0 331 256 97 84 chr17 30759598 30759836 -58744717 - L1M2 LINE L1 -5899 950 710 378 0 0 0 chr17 30760325 30760367 -58744186 + (TG)n Simple_repeat Simple_repeat 2 43 0 2392 103 0 0 chr17 30760612 30760924 -58743629 - AluSx SINE Alu 0 312 1 308 309 21 0 chr17 30761264 30761358 -58743195 - MIR SINE MIR -108 154 59 2316 112 0 6 chr17 30761728 30762042 -58742511 + AluSx SINE Alu 1 312 0 521 278 170 10 chr17 30764242 30764630 -58739923 + L1M4 LINE L1 3590 4039 -2107 3120 109 18 13 chr17 30764727 30765185 -58739368 - Tigger3b DNA MER2_type 0 1231 772 1096 162 0 0 chr17 30765190 30765357 -58739196 - AluSc SINE Alu -10 299 133 1047 99 0 0 chr17 30765402 30765533 -58739020 + AluSc SINE Alu 1 131 -178 3247 139 58 23 chr17 30765547 30765802 -58738751 - Tigger3b DNA MER2_type -2454 574 329 2244 113 3 3 chr17 30765802 30766112 -58738441 + AluSp SINE Alu 1 310 -3 3247 139 58 23 chr17 30766112 30766411 -58738142 - Tigger3b DNA MER2_type -2699 329 1 501 319 54 42 chr17 30766418 30767217 -58737336 + L1M4 LINE L1 4188 5015 -1131 332 235 98 59 chr17 30767434 30767587 -58736966 + L1M LINE L1 5265 5423 -2385 664 246 181 0 chr17 30767593 30767792 -58736761 + MIR SINE MIR 14 248 -14 2070 111 3 14 chr17 30767804 30768101 -58736452 - AluSx SINE Alu -18 294 1 2148 83 35 7 chr17 30768185 30768474 -58736079 + AluSg SINE Alu 1 297 -13 21 0 0 0 chr17 30768810 30768831 -58735722 + AT_rich Low_complexity Low_complexity 1 21 0 1837 165 26 0 chr17 30768942 30769245 -58735308 - AluJb SINE Alu -1 311 1 2454 78 0 0 chr17 30769938 30770247 -58734306 - AluY SINE Alu -2 309 1 21 0 0 0 chr17 30770588 30770609 -58733944 + AT_rich Low_complexity Low_complexity 1 21 0 1166 222 35 14 chr17 30770902 30771190 -58733363 + AluJb SINE Alu 1 294 -8 795 238 6 6 chr17 30771193 30771379 -58733174 + AluJo/FRAM SINE Alu 137 302 0 606 274 142 0 chr17 30771568 30771787 -58732766 + MIR SINE MIR 11 260 -2 243 346 112 0 chr17 30771862 30771969 -58732584 - MIR SINE MIR -90 172 54 32 0 0 0 chr17 30772027 30772059 -58732494 + AT_rich Low_complexity Low_complexity 1 32 0 1651 181 22 4 chr17 30772059 30772336 -58732217 - AluJo SINE Alu -30 282 1 1763 151 51 10 chr17 30772336 30772628 -58731925 - AluJo SINE Alu -8 304 1 347 102 0 0 chr17 30772654 30772703 -58731850 + MADE1 DNA Mariner 1 49 -31 2507 140 30 14 chr17 30772707 30773136 -58731417 - L1MB3 LINE L1 -18 6165 5730 21 57 0 0 chr17 30774646 30774681 -58729872 + GC_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr17 30774799 30774821 -58729732 + GC_rich Low_complexity Low_complexity 1 22 0 342 0 0 0 chr17 30775133 30775171 -58729382 + (TG)n Simple_repeat Simple_repeat 2 39 0 2234 91 0 3 chr17 30775178 30775474 -58729079 - AluSq SINE Alu -17 296 2 843 196 55 6 chr17 30775600 30775763 -58728790 + MER5B DNA MER1_type 1 171 -7 2279 109 0 3 chr17 30777241 30777544 -58727009 - AluSq SINE Alu -11 302 1 195 333 46 23 chr17 30778308 30778395 -58726158 + MIR SINE MIR 23 111 -97 383 304 245 0 chr17 30778544 30778728 -58725825 + MIR SINE MIR 2 230 -32 180 270 124 22 chr17 30778922 30779011 -58725542 + MIR SINE MIR 77 174 -88 2336 109 0 0 chr17 30779031 30779333 -58725220 + AluSx SINE Alu 1 302 -10 1608 126 146 0 chr17 30779507 30779761 -58724792 + AluJo SINE Alu 3 293 -9 24 32 0 0 chr17 30779761 30779792 -58724761 + AT_rich Low_complexity Low_complexity 1 31 0 183 80 0 0 chr17 30780657 30780682 -58723871 + (T)n Simple_repeat Simple_repeat 1 25 0 490 265 92 97 chr17 30780721 30780905 -58723648 - L1MC4a LINE L1 0 6121 5938 294 95 0 0 chr17 30780905 30780947 -58723606 + (CA)n Simple_repeat Simple_repeat 1 42 0 490 265 92 97 chr17 30780947 30781329 -58723224 - L1MC4a LINE L1 -183 5938 5558 1703 170 75 0 chr17 30781585 30781867 -58722686 - AluJo SINE Alu -9 303 1 957 140 0 0 chr17 30782228 30782371 -58722182 + FLAM_C SINE Alu 1 143 0 487 216 239 6 chr17 30782376 30782543 -58722010 - MIR SINE MIR -56 206 1 2036 129 6 28 chr17 30783388 30783706 -58720847 - AluSx SINE Alu -1 311 1 2260 115 0 0 chr17 30783774 30784070 -58720483 - AluSx SINE Alu -16 296 1 542 228 56 71 chr17 30784199 30784396 -58720157 - MIR SINE MIR -47 215 22 201 310 0 0 chr17 30784626 30784684 -58719869 + L2 LINE L2 3254 3311 -2 261 235 0 44 chr17 30785435 30785503 -58719050 - MIR SINE MIR -80 182 118 226 246 215 92 chr17 30785474 30785543 -58719010 - MIR3 SINE MIR -62 146 87 * 1843 52 0 0 chr17 30785543 30785753 -58718800 - AluY SINE Alu -13 298 89 226 246 215 92 chr17 30785753 30785793 -58718760 - MIR3 SINE MIR -121 87 53 2622 183 63 58 chr17 30785793 30786309 -58718244 + MLT2B3 LTR ERVL 1 522 -32 702 48 29 0 chr17 30786309 30786412 -58718141 + (TCCA)n Simple_repeat Simple_repeat 2 107 0 2622 183 63 58 chr17 30786412 30786446 -58718107 + MLT2B3 LTR ERVL 522 554 0 226 246 215 92 chr17 30786446 30786465 -58718088 - MIR3 SINE MIR -155 53 1 25 90 0 0 chr17 30786639 30786706 -58717847 + AT_rich Low_complexity Low_complexity 1 67 0 2243 105 27 0 chr17 30786970 30787266 -58717287 - AluSp SINE Alu -9 304 1 2263 102 3 3 chr17 30787567 30787861 -58716692 - AluSq SINE Alu -19 294 1 794 165 0 0 chr17 30788577 30788710 -58715843 - AluJb SINE Alu -4 308 176 2277 101 0 26 chr17 30790226 30790532 -58714021 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr17 30791090 30791114 -58713439 + (A)n Simple_repeat Simple_repeat 1 24 0 2171 90 0 4 chr17 30791660 30791937 -58712616 + AluSx SINE Alu 5 280 -32 362 20 40 0 chr17 30791937 30791987 -58712566 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 1218 141 0 0 chr17 30791988 30792165 -58712388 + AluSg/x SINE Alu 135 311 -1 247 48 24 24 chr17 30792401 30792443 -58712110 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 1725 106 120 25 chr17 30792857 30793140 -58711413 + AluSg SINE Alu 1 310 0 1799 108 25 0 chr17 30793240 30793480 -58711073 + AluSx SINE Alu 1 246 -66 638 110 0 10 chr17 30793580 30793680 -58710873 - L1 LINE L1 -1839 4307 4209 519 156 0 0 chr17 30793681 30793758 -58710795 + AluY SINE Alu 5 81 -237 1182 54 7 7 chr17 30793758 30793905 -58710648 - AluY SINE Alu -164 147 1 2308 126 0 0 chr17 30794264 30794573 -58709980 - AluSg SINE Alu -1 309 1 249 138 0 46 chr17 30794579 30794644 -58709909 + (TTCTC)n Simple_repeat Simple_repeat 5 66 0 2105 108 10 20 chr17 30794645 30794940 -58709613 - AluSx SINE Alu -20 292 1 230 266 255 0 chr17 30795097 30795191 -58709362 - L2 LINE L2 -5 3267 3150 209 308 46 0 chr17 30795202 30795267 -58709286 + L2 LINE L2 2603 2670 -644 411 156 31 0 chr17 30795316 30795380 -58709173 - LTR8 LTR ERV1 -102 589 524 2418 80 0 0 chr17 30795381 30795681 -58708872 - AluSx SINE Alu -12 300 1 1023 104 0 0 chr17 30795681 30795816 -58708737 - AluSq/x SINE Alu -177 135 1 711 176 75 60 chr17 30795817 30796014 -58708539 - LTR8 LTR ERV1 -150 577 362 265 92 66 0 chr17 30796047 30796123 -58708430 + (TA)n Simple_repeat Simple_repeat 1 81 0 2577 85 67 26 chr17 30796123 30796511 -58708042 - MLT2A1 LTR ERVL -40 404 1 482 127 14 0 chr17 30796511 30796581 -58707972 - LTR8A LTR ERV1 -345 382 312 2945 0 0 0 chr17 30796582 30796893 -58707660 + AluYa5 SINE Alu 1 311 0 2128 120 7 0 chr17 30796906 30797197 -58707356 + AluSx SINE Alu 1 293 -19 1317 97 0 11 chr17 30797240 30797415 -58707138 + AluSg/x SINE Alu 124 296 -14 307 182 18 0 chr17 30797415 30797470 -58707083 - LTR8A LTR ERV1 -407 320 265 213 333 85 16 chr17 30797826 30797955 -58706598 + L3b LINE CR1 1247 1384 -199 2170 121 0 10 chr17 30798291 30798597 -58705956 - AluSg SINE Alu -7 303 1 2464 60 0 0 chr17 30798604 30798905 -58705648 - AluY SINE Alu -10 301 1 1882 164 68 6 chr17 30799043 30799366 -58705187 + MER61A LTR ERV1 1 343 0 1355 148 121 12 chr17 30799471 30799727 -58704826 + AluJo SINE Alu 1 284 -28 5135 123 44 21 chr17 30799770 30800533 -58704020 - L1MB3 LINE L1 -1 6182 5395 1747 168 14 10 chr17 30800533 30800830 -58703723 - AluJo SINE Alu -14 298 1 5135 123 44 21 chr17 30800830 30800921 -58703632 - L1MB3 LINE L1 -788 5395 5308 1935 190 80 35 chr17 30800922 30801388 -58703165 + MLT2B1 LTR ERVL 1 534 -20 384 103 0 0 chr17 30801402 30801460 -58703093 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 315 122 0 189 chr17 30801461 30801535 -58703018 + MLT2D LTR ERVL 357 414 0 3075 195 30 8 chr17 30801564 30802224 -58702329 + MLT-int LTR MaLR 58 742 -629 284 196 18 116 chr17 30802263 30802375 -58702178 + MLT-int LTR MaLR 657 757 -978 1925 250 34 16 chr17 30802467 30802949 -58701604 + MLT1A2-int LTR MaLR 1203 1735 0 1437 210 72 35 chr17 30802949 30803297 -58701256 + MLT1A2 LTR MaLR 1 361 -13 672 163 79 63 chr17 30803302 30803492 -58701061 - L1 LINE L1 -843 5303 5111 2350 97 3 0 chr17 30803531 30803829 -58700724 - AluSx SINE Alu -13 299 1 2046 115 3 3 chr17 30803878 30804186 -58700367 - AluSx SINE Alu 0 309 2 1848 126 77 14 chr17 30804719 30805005 -58699548 - AluSg SINE Alu -6 304 1 2500 62 7 0 chr17 30805467 30805776 -58698777 - AluY SINE Alu 0 311 1 354 217 245 57 chr17 30806437 30806543 -58698010 - FLAM_A SINE Alu -6 127 2 281 287 26 35 chr17 30807196 30807311 -58697242 - MIR SINE MIR -1 261 148 375 254 9 26 chr17 30807404 30807518 -58697035 + HsTC2 DNA Tc2 1781 1892 -6 227 227 61 30 chr17 30807968 30808034 -58696519 - Alu SINE Alu -123 179 136 2109 128 0 3 chr17 30808540 30808845 -58695708 - AluSq SINE Alu -9 304 1 21 0 0 0 chr17 30809056 30809077 -58695476 + AT_rich Low_complexity Low_complexity 1 21 0 2216 97 3 3 chr17 30809153 30809443 -58695110 - AluSx SINE Alu -22 290 1 1836 162 0 46 chr17 30809599 30809926 -58694627 - AluJo SINE Alu 0 312 1 1825 206 65 118 chr17 30809933 30810418 -58694135 - L1ME2 LINE L1 0 6164 5724 1616 160 41 8 chr17 30810418 30810686 -58693867 + AluJo SINE Alu 1 277 -35 1825 206 65 118 chr17 30810686 30810878 -58693675 - L1ME2 LINE L1 -440 5724 5523 2035 106 64 0 chr17 30810977 30811260 -58693293 - AluSg SINE Alu -9 301 1 233 246 33 0 chr17 30811427 30811488 -58693065 - MIR SINE MIR -94 168 106 596 237 90 20 chr17 30811504 30811749 -58692804 - L1MDa LINE L1 -3913 2627 2366 1489 262 70 10 chr17 30811843 30812364 -58692189 - L1ME3 LINE L1 -304 5858 5367 180 225 225 0 chr17 30812640 30812680 -58691873 - MIR SINE MIR -162 100 52 240 189 0 0 chr17 30813421 30813495 -58691058 + (TTAA)n Simple_repeat Simple_repeat 1 74 0 2351 107 3 0 chr17 30813658 30813968 -58690585 - AluSx SINE Alu -1 311 1 347 333 88 78 chr17 30814200 30814600 -58689953 + L2 LINE L2 2867 3270 -2 890 160 8 0 chr17 30814840 30814965 -58689588 - FLAM_C SINE Alu -7 126 1 232 25 75 0 chr17 30814984 30815024 -58689529 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 230 341 124 8 chr17 30815024 30815153 -58689400 - L2 LINE L2 -26 3287 3144 850 174 8 0 chr17 30815304 30815436 -58689117 + FLAM_C SINE Alu 1 133 0 1570 225 132 76 chr17 30815954 30816469 -58688084 - MLT1H1 LTR MaLR 0 555 12 1547 187 3 71 chr17 30817471 30817797 -58686756 - AluJo SINE Alu -8 304 1 2199 81 3 3 chr17 30817941 30818258 -58686295 - AluY SINE Alu 0 317 1 222 315 27 14 chr17 30818476 30818549 -58686004 - MER5B DNA MER1_type -104 74 1 230 289 340 0 chr17 30818683 30818780 -58685773 + L2 LINE L2 3143 3272 0 220 340 32 21 chr17 30818764 30818858 -58685695 - MIR SINE MIR -148 114 20 * 291 298 46 40 chr17 30819016 30819167 -58685386 - MIR SINE MIR -55 207 56 216 0 0 0 chr17 30820637 30820661 -58683892 + (T)n Simple_repeat Simple_repeat 1 24 0 2470 76 0 0 chr17 30820930 30821234 -58683319 - AluSq SINE Alu -9 304 1 2039 145 0 0 chr17 30821782 30822072 -58682481 + AluSx SINE Alu 5 294 -18 368 298 75 126 chr17 30822257 30822379 -58682174 + L2 LINE L2 2890 3017 -255 1548 179 18 25 chr17 30822379 30822659 -58681894 - AluJo SINE Alu -29 283 6 368 298 75 126 chr17 30822659 30822885 -58681668 + L2 LINE L2 3017 3220 -52 825 101 201 0 chr17 30823653 30823802 -58680751 - MER30 DNA MER1_type 0 230 52 2135 141 0 0 chr17 30823802 30824106 -58680447 - AluSx SINE Alu -8 304 1 34 24 0 0 chr17 30824231 30824272 -58680281 + AT_rich Low_complexity Low_complexity 1 41 0 1734 178 18 0 chr17 30824382 30824663 -58679890 - AluJo SINE Alu -14 298 13 30 45 0 0 chr17 30824755 30824799 -58679754 + AT_rich Low_complexity Low_complexity 1 44 0 193 333 53 0 chr17 30824891 30824966 -58679587 + L2 LINE L2 3142 3220 -52 498 116 32 0 chr17 30824984 30825079 -58679474 - L1MB8 LINE L1 0 6178 6081 1704 206 0 3 chr17 30825103 30825395 -58679158 - AluJb SINE Alu -21 291 1 2281 67 3 0 chr17 30825420 30825725 -58678828 + AluY SINE Alu 1 306 0 332 241 94 33 chr17 30825745 30825912 -58678641 + L1 LINE L1 5150 5338 -824 2075 95 25 7 chr17 30825912 30826195 -58678358 + AluSx SINE Alu 1 288 -24 332 241 94 33 chr17 30826195 30826261 -58678292 + L1 LINE L1 5338 5399 -763 21 36 0 0 chr17 30826264 30826292 -58678261 + AT_rich Low_complexity Low_complexity 1 28 0 2471 58 0 0 chr17 30826347 30826640 -58677913 + AluSq SINE Alu 1 293 -20 21 0 0 0 chr17 30826640 30826661 -58677892 + AT_rich Low_complexity Low_complexity 1 21 0 2389 66 7 7 chr17 30826661 30826965 -58677588 + AluY SINE Alu 1 304 -7 2518 62 7 0 chr17 30826965 30827272 -58677281 + AluY SINE Alu 1 309 -2 230 267 58 8 chr17 30827411 30827531 -58677022 + L1ME LINE L1 5690 5815 -306 22 0 0 0 chr17 30827547 30827569 -58676984 + AT_rich Low_complexity Low_complexity 1 22 0 2146 124 0 19 chr17 30827752 30827926 -58676627 - AluSq SINE Alu -5 308 141 2298 104 3 0 chr17 30827926 30828233 -58676320 - AluSc SINE Alu -1 308 1 2146 124 0 19 chr17 30828233 30828372 -58676181 - AluSq SINE Alu -172 141 1 2100 129 0 26 chr17 30828649 30828960 -58675593 - AluSx SINE Alu -9 303 1 2166 117 20 0 chr17 30830042 30830341 -58674212 - AluSx SINE Alu -7 305 1 2295 108 23 0 chr17 30830445 30830750 -58673803 - AluSx SINE Alu 0 312 1 671 163 36 68 chr17 30830751 30830945 -58673608 - LTR8 LTR ERV1 -150 577 385 265 92 66 0 chr17 30830981 30831057 -58673496 + (TA)n Simple_repeat Simple_repeat 2 82 0 833 119 60 32 chr17 30831057 30831242 -58673311 - MLT2A1 LTR ERVL -40 404 215 1567 68 5 0 chr17 30831358 30831550 -58673003 + AluY SINE Alu 105 297 -14 1900 159 0 10 chr17 30832394 30832706 -58671847 - AluJo SINE Alu 0 309 1 1917 138 20 7 chr17 30833132 30833428 -58671125 + AluJb SINE Alu 1 300 -12 6369 82 11 4 chr17 30833720 30835026 -58669527 - L1PA11 LINE L1 -1 6173 4844 2972 162 164 41 chr17 30835026 30835870 -58668683 - MER52C LTR ERV1 -1 1277 16 1508 181 7 0 chr17 30835895 30836198 -58668355 - L1P LINE L1 -1297 4849 4545 2486 94 0 9 chr17 30836358 30836849 -58667704 - L1M1 LINE L1 -707 5598 5111 5863 113 13 5 chr17 30836859 30838064 -58666489 + L1MA2 LINE L1 4872 6092 -212 1776 164 21 7 chr17 30838064 30838345 -58666208 + AluJo SINE Alu 1 285 -27 5863 113 13 5 chr17 30838345 30838403 -58666150 + L1MA2 LINE L1 6092 6148 -156 2169 110 4 0 chr17 30838403 30838684 -58665869 + AluSp SINE Alu 1 282 -31 403 270 52 17 chr17 30838696 30838811 -58665742 + L2 LINE L2 3195 3313 0 1096 106 0 12 chr17 30839642 30839802 -58664751 - L1MC1 LINE L1 0 6333 6176 214 245 19 0 chr17 30840304 30840357 -58664196 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 195 250 23 0 chr17 30840367 30840411 -58664142 - L2 LINE L2 -11 3261 3217 1277 155 14 83 chr17 30840421 30840698 -58663855 - AluJo SINE Alu -54 258 1 218 140 0 20 chr17 30841694 30841744 -58662809 + (TTTC)n Simple_repeat Simple_repeat 2 50 0 2279 119 0 0 chr17 30841754 30842057 -58662496 - AluSg SINE Alu -7 303 1 189 0 0 0 chr17 30842192 30842213 -58662340 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 347 282 19 0 chr17 30842430 30842533 -58662020 + L1ME LINE L1 5529 5633 -488 2243 108 0 7 chr17 30842727 30843034 -58661519 + AluSg SINE Alu 1 305 -5 845 151 0 0 chr17 30843095 30843221 -58661332 - FLAM_C SINE Alu -7 126 1 495 176 20 20 chr17 30843263 30843365 -58661188 + U13 snRNA snRNA 1 102 -2 192 158 0 0 chr17 30843369 30843407 -58661146 + A-rich Low_complexity Low_complexity 1 38 0 286 277 86 72 chr17 30843954 30844232 -58660321 + L2 LINE L2 1527 1808 -1506 752 108 0 0 chr17 30844269 30844371 -58660182 - AluJ/FLAM SINE Alu -210 102 1 771 343 119 29 chr17 30844394 30845157 -58659396 + L2 LINE L2 1825 2656 -658 187 328 0 0 chr17 30845246 30845304 -58659249 + MER5A DNA MER1_type 127 184 -5 207 0 0 0 chr17 30845606 30845629 -58658924 + (A)n Simple_repeat Simple_repeat 1 23 0 1136 195 53 38 chr17 30845632 30845889 -58658664 + MER21B LTR ERV1 25 286 -573 2725 80 11 3 chr17 30845889 30846250 -58658303 + THE1B LTR MaLR 1 364 0 2893 72 83 114 chr17 30846257 30846722 -58657831 + THE1B-int LTR MaLR 8 453 -1127 2343 113 0 0 chr17 30846722 30847023 -58657530 + AluSx SINE Alu 1 301 -11 2893 72 83 114 chr17 30847023 30847138 -58657415 + THE1B-int LTR MaLR 453 570 -1010 275 333 114 0 chr17 30847200 30847323 -58657230 - MIR3 SINE MIR -10 198 62 725 212 212 5 chr17 30847741 30847944 -58656609 + MIR SINE MIR 18 262 0 1900 169 0 3 chr17 30848212 30848496 -58656057 + AluJb SINE Alu 1 283 -29 1641 157 39 30 chr17 30848910 30849215 -58655338 + AluJb SINE Alu 1 308 -4 1581 173 54 38 chr17 30849291 30849424 -58655129 + L1MB8 LINE L1 4896 5025 -1121 2165 125 10 0 chr17 30849424 30849728 -58654825 + AluSx SINE Alu 3 309 -3 1581 173 54 38 chr17 30849728 30850021 -58654532 + L1MB8 LINE L1 5025 5329 -817 800 182 94 69 chr17 30850021 30850224 -58654329 + AluJo SINE Alu 82 289 -23 3534 171 77 10 chr17 30850242 30851043 -58653510 + L1MB8 LINE L1 5316 6173 -5 2182 82 0 0 chr17 30851043 30851311 -58653242 - AluSc SINE Alu -41 268 1 364 339 65 12 chr17 30851456 30851624 -58652929 - MER5A DNA MER1_type 0 189 13 594 120 10 0 chr17 30851702 30851802 -58652751 - MER51A LTR ERV1 -65 569 469 659 184 0 57 chr17 30852321 30852462 -58652091 - FLAM_A SINE Alu 0 133 1 294 176 118 0 chr17 30852811 30852879 -58651674 + HY5 scRNA scRNA 1 76 -8 28 29 0 0 chr17 30852879 30852914 -58651639 + AT_rich Low_complexity Low_complexity 1 35 0 577 336 69 30 chr17 30852970 30853508 -58651045 + L2 LINE L2 1498 2056 -1258 1599 183 38 44 chr17 30853572 30853939 -58650614 + MLT1A1 LTR MaLR 1 365 0 422 233 80 7 chr17 30853945 30854095 -58650458 + MER103 DNA DNA 6 166 0 341 243 322 20 chr17 30854372 30854524 -58650029 + MIR SINE MIR 65 262 0 188 377 88 31 chr17 30854525 30854608 -58649945 + L2 LINE L2 2239 2316 -998 1340 208 81 19 chr17 30854608 30854930 -58649623 + MER2 DNA MER2_type 2 343 -1 188 377 88 31 chr17 30854930 30855074 -58649479 + L2 LINE L2 2316 2479 -835 189 333 128 43 chr17 30855171 30855312 -58649241 + L2 LINE L2 2731 2883 -431 326 129 71 23 chr17 30855432 30856033 -58648520 + (TA)n Simple_repeat Simple_repeat 1 629 0 202 222 57 34 chr17 30856074 30856591 -58647962 + (TA)n Simple_repeat Simple_repeat 1 528 0 225 204 62 31 chr17 30856632 30856794 -58647759 + (TA)n Simple_repeat Simple_repeat 1 167 0 414 147 0 0 chr17 30856807 30856875 -58647678 - MER2 DNA MER2_type -228 117 50 37 29 0 43 chr17 30856875 30856945 -58647608 + AT_rich Low_complexity Low_complexity 1 67 0 203 302 174 0 chr17 30857220 30857306 -58647247 - L2 LINE L2 -5 3308 3208 200 227 0 0 chr17 30857345 30857389 -58647164 + (TA)n Simple_repeat Simple_repeat 1 44 0 26814 31 3 1 chr17 30857460 30861642 -58642911 + L1PA4 LINE L1 1967 6155 0 579 188 0 0 chr17 30862028 30862145 -58642408 + CT-rich Low_complexity Low_complexity 3 119 0 1628 174 7 24 chr17 30862150 30862437 -58642116 - AluJo SINE Alu -30 282 1 1982 135 7 0 chr17 30863256 30863537 -58641016 + AluSq SINE Alu 3 285 -28 269 159 16 0 chr17 30863544 30863607 -58640946 + (TA)n Simple_repeat Simple_repeat 2 65 0 40 21 0 0 chr17 30863607 30863654 -58640899 + AT_rich Low_complexity Low_complexity 1 47 0 277 278 112 29 chr17 30863654 30863859 -58640694 + MARNA DNA Mariner 27 248 -338 528 256 105 12 chr17 30864099 30864271 -58640282 + MARNA DNA Mariner 286 473 -113 6143 129 5 2 chr17 30864273 30865267 -58639286 + L1P LINE L1 3412 4408 -1738 1063 156 103 73 chr17 30865546 30865678 -58638875 + MER2 DNA MER2_type 2 129 -216 1598 191 38 3 chr17 30865678 30865846 -58638707 - AluJo SINE Alu -11 301 117 195 42 0 0 chr17 30865846 30865870 -58638683 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1598 191 38 3 chr17 30865870 30865989 -58638564 - AluJo SINE Alu -195 117 4 1063 156 103 73 chr17 30865989 30866157 -58638396 + MER2 DNA MER2_type 129 311 -34 2333 98 0 7 chr17 30866165 30866470 -58638083 - AluY SINE Alu -8 303 1 456 123 284 0 chr17 30866755 30866836 -58637717 + FLAM_C SINE Alu 28 131 -12 1970 82 4 0 chr17 30866867 30867112 -58637441 + AluSp SINE Alu 1 246 -67 24 67 0 0 chr17 30867872 30867917 -58636636 + AT_rich Low_complexity Low_complexity 1 45 0 294 279 271 8 chr17 30868310 30868432 -58636121 - L2 LINE L2 -1 3312 3159 225 94 0 0 chr17 30869168 30869200 -58635353 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 895 128 60 0 chr17 30869205 30869338 -58635215 - FRAM SINE Alu -36 140 1 2155 84 3 7 chr17 30869570 30869855 -58634698 - AluSc SINE Alu -15 294 11 1978 158 0 0 chr17 30870285 30870583 -58633970 - AluJo SINE Alu -14 298 1 227 246 66 0 chr17 30871240 30871301 -58633252 - L1MC4 LINE L1 -13 8029 7965 2241 116 7 3 chr17 30871519 30871822 -58632731 + AluSx SINE Alu 1 304 -8 209 194 0 0 chr17 30871957 30871993 -58632560 - L2 LINE L2 -23 3290 3255 1213 231 126 58 chr17 30872098 30872648 -58631905 - MLT1L LTR MaLR -28 587 1 261 260 117 0 chr17 30872703 30872780 -58631773 + MLT1K LTR MaLR 3 88 -500 836 283 81 29 chr17 30872792 30873100 -58631453 + MLT1K LTR MaLR 265 588 0 21 0 0 0 chr17 30873892 30873913 -58630640 + AT_rich Low_complexity Low_complexity 1 21 0 758 262 191 25 chr17 30874014 30874331 -58630222 - MLT1I LTR MaLR -1 449 28 579 253 111 97 chr17 30874477 30874848 -58629705 - MLT1K LTR MaLR -144 444 69 232 289 105 0 chr17 30875232 30875308 -58629245 - MIR SINE MIR -142 120 37 265 281 146 0 chr17 30875346 30875428 -58629125 + L2 LINE L2 3189 3282 -31 578 253 24 41 chr17 30877084 30877254 -58627299 - MIR SINE MIR -14 248 82 192 40 0 0 chr17 30877386 30877411 -58627142 + (TG)n Simple_repeat Simple_repeat 2 26 0 333 260 13 0 chr17 30877558 30877635 -58626918 - L2 LINE L2 0 3272 3195 618 334 73 69 chr17 30877645 30877759 -58626794 + L2 LINE L2 2665 2777 -536 2457 80 0 0 chr17 30877759 30878060 -58626493 - AluY SINE Alu -10 301 1 618 334 73 69 chr17 30878060 30878599 -58625954 + L2 LINE L2 2777 3313 0 2017 123 23 26 chr17 30879491 30879800 -58624753 - AluSq SINE Alu -5 308 1 1576 170 49 4 chr17 30880075 30880340 -58624213 - AluJo SINE Alu -22 290 14 3997 181 19 13 chr17 30880394 30880576 -58623977 - L1 LINE L1 -3196 4369 4190 2089 122 19 19 chr17 30880576 30880888 -58623665 - AluSx SINE Alu 0 312 1 3997 181 19 13 chr17 30880888 30881603 -58622950 - L1 LINE L1 -3375 4190 3463 1118 116 0 16 chr17 30881603 30881853 -58622700 + (TCCC)n Simple_repeat Simple_repeat 1 423 0 1019 162 5 5 chr17 30881853 30882044 -58622509 - L1 LINE L1 -4068 3497 3307 279 226 9 52 chr17 30882056 30882171 -58622382 + L1MA3 LINE L1 5297 5406 -2402 979 108 0 0 chr17 30882245 30882384 -58622169 + L1MA3 LINE L1 6167 6305 0 520 277 119 10 chr17 30882406 30882709 -58621844 - L1M4 LINE L1 -873 5273 4938 1257 81 121 6 chr17 30883723 30883897 -58620656 + AluY SINE Alu 105 298 -13 36 0 0 0 chr17 30883931 30883967 -58620586 + AT_rich Low_complexity Low_complexity 1 36 0 222 294 247 0 chr17 30884075 30884160 -58620393 + MIR SINE MIR 2 107 -155 609 222 175 36 chr17 30884162 30884414 -58620139 + L2 LINE L2 3025 3311 -2 2344 100 0 16 chr17 30884895 30885206 -58619347 + AluSx SINE Alu 1 306 -6 7775 178 84 35 chr17 30885701 30887349 -58617204 + MER52A LTR ERV1 27 1755 0 357 305 63 58 chr17 30887502 30887676 -58616877 + MER5B DNA MER1_type 3 177 -1 301 280 93 17 chr17 30887822 30887940 -58616613 + MIR SINE MIR 117 243 -19 790 224 137 15 chr17 30888685 30888890 -58615663 - MIR SINE MIR -31 231 2 474 142 19 246 chr17 30888970 30889238 -58615315 + L1ME3A LINE L1 5963 6169 -1 1811 166 3 25 chr17 30889640 30889954 -58614599 - AluJo SINE Alu -5 307 1 616 202 67 67 chr17 30889959 30890092 -58614461 - MER5B DNA MER1_type 0 178 43 2251 110 0 0 chr17 30890092 30890392 -58614161 + AluSx SINE Alu 1 300 -12 616 202 67 67 chr17 30890392 30890436 -58614117 - MER5B DNA MER1_type -134 44 1 2032 118 0 68 chr17 30891173 30891495 -58613058 + AluSx SINE Alu 1 300 -12 209 158 193 0 chr17 30892950 30893007 -58611546 + L2 LINE L2 3246 3313 0 1515 165 158 0 chr17 30893520 30893780 -58610773 - AluJo SINE Alu -1 301 1 2161 116 17 0 chr17 30893961 30894254 -58610299 - AluSx SINE Alu -14 298 1 1328 191 105 50 chr17 30895629 30896057 -58608496 + MER66A LTR ERV1 102 478 0 2518 63 0 0 chr17 30897118 30897421 -58607132 + AluY SINE Alu 1 303 -8 2133 113 0 23 chr17 30897637 30897777 -58606776 + AluSx SINE Alu 1 143 -169 225 0 0 0 chr17 30897777 30897802 -58606751 + (TA)n Simple_repeat Simple_repeat 2 26 0 2133 113 0 23 chr17 30897802 30897971 -58606582 + AluSx SINE Alu 143 303 -9 2486 69 0 0 chr17 30898626 30898929 -58605624 + AluY SINE Alu 3 305 -6 22 0 0 0 chr17 30899025 30899047 -58605506 + AT_rich Low_complexity Low_complexity 1 22 0 2111 98 21 7 chr17 30899235 30899547 -58605006 + AluSq SINE Alu 1 316 0 1163 200 0 37 chr17 30899559 30899804 -58604749 + AluJo SINE Alu 63 298 -14 2075 118 24 0 chr17 30899920 30900209 -58604344 + AluSx SINE Alu 1 296 -16 2286 88 3 0 chr17 30900475 30900770 -58603783 - AluY SINE Alu -15 296 1 272 228 65 33 chr17 30900890 30900982 -58603571 + L1M4 LINE L1 3885 3979 -2167 2173 91 13 10 chr17 30901007 30901305 -58603248 - AluSc SINE Alu -10 299 1 711 253 6 18 chr17 30901562 30901732 -58602821 + MIR SINE MIR 48 215 -47 597 200 22 67 chr17 30901740 30901875 -58602678 + FLAM_A SINE Alu 1 129 -4 23 54 0 0 chr17 30901937 30901974 -58602579 + AT_rich Low_complexity Low_complexity 1 37 0 194 263 88 0 chr17 30902141 30902198 -58602355 - L2 LINE L2 -2 3311 3250 2319 68 4 0 chr17 30902586 30902866 -58601687 + AluSx SINE Alu 1 281 -31 198 0 0 0 chr17 30902869 30902891 -58601662 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 222 299 0 15 chr17 30903003 30903070 -58601483 + T-rich Low_complexity Low_complexity 4 69 0 1883 155 0 10 chr17 30903140 30903443 -58601110 + AluJb SINE Alu 1 300 -12 1097 159 0 0 chr17 30904344 30904507 -58600046 + AluJb SINE Alu 136 298 -14 553 70 233 0 chr17 30904848 30904934 -58599619 - THE1C LTR MaLR -269 106 1 788 21 0 0 chr17 30904934 30905031 -58599522 - THE1C-int LTR MaLR 0 1580 1484 2404 99 56 31 chr17 30905049 30905404 -58599149 - THE1B LTR MaLR 0 364 1 1489 183 62 7 chr17 30905418 30905692 -58598861 - AluJb SINE Alu -23 289 1 1804 175 87 4 chr17 30905692 30906079 -58598474 - L1MB2 LINE L1 -40 6131 5711 305 298 32 0 chr17 30906054 30906148 -58598405 - L1MC/D LINE L1 -1985 5823 5727 * 643 174 159 0 chr17 30906156 30906294 -58598259 - MLT1D LTR MaLR -8 497 338 1866 132 9 150 chr17 30906295 30906512 -58598041 + MLT1B LTR MaLR 1 126 -264 1767 167 36 13 chr17 30906512 30906817 -58597736 + AluJo SINE Alu 1 312 0 1866 132 9 150 chr17 30906817 30907040 -58597513 + MLT1B LTR MaLR 126 379 -11 872 233 27 99 chr17 30907048 30907214 -58597339 - MLT1D LTR MaLR -165 340 164 6343 94 2 66 chr17 30907214 30907758 -58596795 - L1PA13 LINE L1 -4 6159 5582 2289 107 0 3 chr17 30907758 30908058 -58596495 - AluSq SINE Alu -9 304 6 6343 94 2 66 chr17 30908058 30908354 -58596199 - L1PA13 LINE L1 -581 5582 5269 1998 143 31 0 chr17 30908354 30908647 -58595906 - AluSx SINE Alu -10 302 1 6343 94 2 66 chr17 30908647 30908659 -58595894 - L1PA13 LINE L1 -894 5269 5258 2236 120 3 0 chr17 30908659 30908960 -58595593 - AluSx SINE Alu -10 302 1 6343 94 2 66 chr17 30908960 30909275 -58595278 - L1PA13 LINE L1 -905 5258 5019 872 233 27 99 chr17 30909275 30909473 -58595080 - MLT1D LTR MaLR -341 164 2 1955 119 45 0 chr17 30909480 30909766 -58594787 - AluSg SINE Alu -11 299 1 190 306 0 0 chr17 30910255 30910304 -58594249 + L2 LINE L2 3263 3311 -2 969 154 51 133 chr17 30910885 30911119 -58593434 + MER58C DNA MER1_type 1 215 0 618 322 87 17 chr17 30911330 30911619 -58592934 + MLT1L LTR MaLR 215 523 -92 2203 100 3 3 chr17 30911941 30912286 -58592267 + AluSq SINE Alu 1 313 0 951 181 68 0 chr17 30912712 30912889 -58591664 + MER5A DNA MER1_type 1 189 0 2277 112 0 6 chr17 30913737 30914050 -58590503 + AluSx SINE Alu 1 311 -1 1634 170 16 29 chr17 30914743 30915055 -58589498 - AluJb SINE Alu -4 308 1 2128 117 3 3 chr17 30916374 30916673 -58587880 + AluSx SINE Alu 1 299 -13 640 234 153 22 chr17 30917953 30918262 -58586291 + L1MC4 LINE L1 5583 5654 -467 26 30 0 0 chr17 30918432 30918465 -58586088 + AT_rich Low_complexity Low_complexity 1 33 0 381 262 107 29 chr17 30919513 30919757 -58584796 + L1ME LINE L1 5355 5617 -504 807 169 0 7 chr17 30920393 30920535 -58584018 + FLAM_C SINE Alu 3 143 0 2104 122 3 0 chr17 30920633 30920927 -58583626 + AluSx SINE Alu 1 295 -17 2143 116 3 0 chr17 30921196 30921490 -58583063 + AluSx SINE Alu 1 295 -17 1957 150 7 0 chr17 30921929 30922216 -58582337 + AluJb SINE Alu 1 289 -23 31 20 0 20 chr17 30922273 30922291 -58582262 + AT_rich Low_complexity Low_complexity 1 18 -30 2135 118 40 40 chr17 30922291 30922665 -58581888 + THE1C LTR MaLR 1 374 -1 31 20 0 20 chr17 30922665 30922695 -58581858 + AT_rich Low_complexity Low_complexity 18 48 0 352 222 56 9 chr17 30922811 30922919 -58581634 + L2 LINE L2 2132 2244 -1070 259 204 0 19 chr17 30922964 30923018 -58581535 - Tigger5 DNA MER2_type -2270 53 1 1306 308 93 33 chr17 30923025 30923778 -58580775 + L2 LINE L2 2259 3054 -218 1989 92 11 26 chr17 31023883 31024156 -58480397 + AluSx SINE Alu 7 275 -37 22 0 0 0 chr17 31024159 31024181 -58480372 + AT_rich Low_complexity Low_complexity 1 22 0 2237 194 138 3 chr17 31024273 31024763 -58479790 + L1MC4 LINE L1 6435 6858 -1138 1776 141 36 0 chr17 31024763 31025040 -58479513 + AluJb SINE Alu 1 287 -25 192 77 0 0 chr17 31025040 31025066 -58479487 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2237 194 138 3 chr17 31025066 31025123 -58479430 + L1MC4 LINE L1 6857 7053 -943 1846 239 72 15 chr17 31025119 31025663 -58478890 + L1MC4a LINE L1 7165 7833 -95 * 1878 159 10 22 chr17 31025803 31026117 -58478436 + AluJb SINE Alu 3 312 0 1613 158 96 7 chr17 31026652 31026924 -58477629 + MER1B DNA MER1_type 44 339 0 300 314 10 20 chr17 31027134 31027236 -58477317 + MIR SINE MIR 33 133 -129 21 57 0 0 chr17 31027798 31027833 -58476720 + AT_rich Low_complexity Low_complexity 1 35 0 2352 108 0 0 chr17 31028481 31028786 -58475767 - AluSx SINE Alu -5 307 3 21 36 0 0 chr17 31028915 31028943 -58475610 + AT_rich Low_complexity Low_complexity 1 28 0 2160 121 7 3 chr17 31029046 31029344 -58475209 - AluSq SINE Alu -14 299 1 21 0 0 0 chr17 31029462 31029483 -58475070 + AT_rich Low_complexity Low_complexity 1 21 0 186 71 0 0 chr17 31031416 31031444 -58473109 + (AGGTG)n Simple_repeat Simple_repeat 3 30 0 700 233 35 20 chr17 31031739 31031941 -58472612 + L1MC4 LINE L1 7688 7892 -150 247 188 0 25 chr17 31031962 31032042 -58472511 + (TA)n Simple_repeat Simple_repeat 1 78 0 234 207 58 46 chr17 31032043 31032130 -58472423 - L1MC4 LINE L1 -1337 6705 6618 234 219 19 67 chr17 31032051 31032156 -58472397 + L1MC4 LINE L1 6604 6703 -1339 266 210 29 43 chr17 31032157 31032295 -58472258 + (TA)n Simple_repeat Simple_repeat 1 136 0 180 111 0 0 chr17 31035032 31035059 -58469494 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1409 118 26 31 chr17 31037067 31037296 -58467257 + AluJb SINE Alu 32 259 -53 235 227 55 82 chr17 31038578 31038688 -58465865 + MIR SINE MIR 47 153 -109 1558 195 48 6 chr17 31040966 31041279 -58463274 - LTR2 LTR ERV1 0 449 124 373 230 41 43 chr17 31041389 31041444 -58463109 - L1ME LINE L1 -555 5566 5512 1969 149 7 3 chr17 31041444 31041733 -58462820 + AluSx SINE Alu 2 291 -21 2477 78 0 0 chr17 31041736 31042045 -58462508 + AluY SINE Alu 1 309 -2 373 230 41 43 chr17 31042045 31042142 -58462411 - L1ME LINE L1 -611 5510 5419 439 250 40 0 chr17 31042159 31042283 -58462270 + L1ME3A LINE L1 4915 5043 -1103 793 154 96 11 chr17 31042283 31042470 -58462083 + MER3 DNA MER1_type 2 164 -45 2311 74 3 0 chr17 31042555 31042863 -58461690 + AluSp SINE Alu 1 309 0 207 0 0 0 chr17 31042912 31042935 -58461618 + (A)n Simple_repeat Simple_repeat 1 23 0 1696 165 33 4 chr17 31042949 31043222 -58461331 + AluJb SINE Alu 11 291 -21 1080 211 41 71 chr17 31043273 31043637 -58460916 + L1ME3A LINE L1 5406 5758 -412 231 251 333 0 chr17 31043659 31043830 -58460723 + L1ME3A LINE L1 5935 6162 -8 305 281 10 10 chr17 31043886 31043982 -58460571 - MLT1K LTR MaLR 0 588 493 315 0 0 0 chr17 31043982 31044017 -58460536 + (A)n Simple_repeat Simple_repeat 1 35 0 438 296 86 13 chr17 31044210 31044362 -58460191 - MLT1K LTR MaLR -415 173 11 21 0 0 0 chr17 31045400 31045421 -58459132 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 25 chr17 31045609 31045632 -58458921 + AT_rich Low_complexity Low_complexity 1 24 -15 1563 211 18 0 chr17 31045632 31045916 -58458637 - AluJo SINE Alu -23 289 1 29 0 0 25 chr17 31045916 31045932 -58458621 + AT_rich Low_complexity Low_complexity 24 39 0 21 36 0 0 chr17 31046098 31046126 -58458427 + AT_rich Low_complexity Low_complexity 1 28 0 221 313 0 50 chr17 31046589 31046771 -58457782 + CT-rich Low_complexity Low_complexity 2 174 0 1979 154 27 0 chr17 31047686 31047984 -58456569 - AluSx SINE Alu -6 306 1 22 0 0 0 chr17 31047990 31048012 -58456541 + AT_rich Low_complexity Low_complexity 1 22 0 610 195 54 87 chr17 31048826 31048941 -58455612 + MER3 DNA MER1_type 31 148 -61 2361 100 0 0 chr17 31048941 31049252 -58455301 - AluY SINE Alu 0 311 1 2124 124 0 0 chr17 31049253 31049543 -58455010 - AluSc SINE Alu -19 290 1 610 195 54 87 chr17 31049543 31049610 -58454943 + MER3 DNA MER1_type 147 209 0 219 108 0 0 chr17 31049832 31049857 -58454696 + (A)n Simple_repeat Simple_repeat 1 28 -9 1470 128 50 157 chr17 31049857 31049992 -58454561 + AluJb SINE Alu 2 150 -152 2259 115 3 10 chr17 31049992 31050305 -58454248 + AluSx SINE Alu 1 311 -1 1470 128 50 157 chr17 31050305 31050506 -58454047 + AluJb SINE Alu 150 302 0 219 108 0 0 chr17 31050506 31050517 -58454036 + (A)n Simple_repeat Simple_repeat 27 37 0 914 199 65 16 chr17 31051101 31051287 -58453266 + MER58A DNA MER1_type 1 195 -29 271 26 154 0 chr17 31051332 31051371 -58453182 + MER58A DNA MER1_type 175 219 -5 2049 121 7 0 chr17 31051450 31051731 -58452822 + AluSx SINE Alu 5 287 -25 1986 139 14 0 chr17 31051765 31052053 -58452500 + AluJb SINE Alu 1 292 -20 25 51 0 0 chr17 31052843 31052882 -58451671 + AT_rich Low_complexity Low_complexity 1 39 0 679 271 106 18 chr17 31053968 31054186 -58450367 + MIR SINE MIR 26 262 0 1966 129 0 23 chr17 31054512 31054815 -58449738 - AluJb SINE Alu -15 297 2 1963 130 0 33 chr17 31055274 31055575 -58448978 - AluSg SINE Alu -19 291 1 339 246 18 18 chr17 31055646 31055760 -58448793 + L1M4 LINE L1 2451 2564 -3582 229 50 25 25 chr17 31055760 31055800 -58448753 + (CAAAA)n Simple_repeat Simple_repeat 4 43 0 1212 119 0 32 chr17 31055867 31056052 -58448501 - AluSg/x SINE Alu -9 303 125 896 257 70 45 chr17 31056053 31056192 -58448361 + L1M4 LINE L1 2678 2812 -3334 1462 149 114 21 chr17 31056192 31056513 -58448040 + AluSx SINE Alu 1 312 0 896 257 70 45 chr17 31056513 31056856 -58447697 + L1M4 LINE L1 2812 3172 -2974 284 312 107 58 chr17 31057005 31057370 -58447183 + L1M4 LINE L1 3729 4111 -2035 338 280 21 21 chr17 31057780 31057873 -58446680 + MIR3 SINE MIR 82 174 -34 842 316 17 0 chr17 31058048 31058285 -58446268 + MIR SINE MIR 8 248 -14 192 324 105 19 chr17 31058458 31058563 -58445990 + MIR SINE MIR 38 151 -57 2148 122 0 0 chr17 31058633 31058929 -58445624 + AluSx SINE Alu 1 296 -16 1083 177 105 5 chr17 31059414 31059623 -58444930 - MER46A DNA MER2_type -6 230 1 248 259 0 129 chr17 31059836 31059885 -58444668 + MIR3 SINE MIR 100 154 -54 438 20 0 0 chr17 31059885 31059936 -58444617 + (GA)n Simple_repeat Simple_repeat 1 51 0 297 0 0 0 chr17 31059935 31059968 -58444585 + (TG)n Simple_repeat Simple_repeat 1 33 0 * 248 259 0 129 chr17 31059936 31060034 -58444519 + MIR3 SINE MIR 154 200 -8 2184 119 0 3 chr17 31060296 31060598 -58443955 + AluSx SINE Alu 1 301 -11 3656 207 69 9 chr17 31060807 31061707 -58442846 + L1MA9 LINE L1 5353 6291 -21 329 132 118 40 chr17 31061712 31061788 -58442765 + L1MB7 LINE L1 6089 6170 -14 455 143 44 55 chr17 31061822 31061913 -58442640 + L1MC1 LINE L1 6235 6324 -9 22 35 0 0 chr17 31062122 31062151 -58442402 + AT_rich Low_complexity Low_complexity 1 29 0 221 169 99 56 chr17 31062236 31062307 -58442246 - MIR SINE MIR -8 254 181 441 286 64 41 chr17 31064439 31064610 -58439943 - MER91A DNA MER1_type 0 196 22 1092 146 0 12 chr17 31065538 31065703 -58438850 - FRAM SINE Alu -15 161 1 399 190 26 60 chr17 31066312 31066428 -58438125 - MER103 DNA DNA -19 147 36 2072 113 0 14 chr17 31066428 31066721 -58437832 - AluSx SINE Alu -23 289 1 239 204 0 19 chr17 31066721 31066775 -58437778 - MER103 DNA DNA -106 60 8 192 146 42 21 chr17 31066856 31066904 -58437649 - MIR SINE MIR -65 143 95 1781 143 57 4 chr17 31067462 31067741 -58436812 + AluJo SINE Alu 1 294 -18 1319 130 0 0 chr17 31067885 31068062 -58436491 - AluSx SINE Alu -135 177 1 22 0 0 0 chr17 31069853 31069875 -58434678 + AT_rich Low_complexity Low_complexity 1 22 0 800 197 68 44 chr17 31070612 31070918 -58433635 - MER96B DNA MER1_type? -27 390 20 189 0 0 0 chr17 31070971 31070992 -58433561 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 250 210 90 40 chr17 31071113 31071213 -58433340 + L1MEd LINE L1 2 106 -6013 248 0 31 0 chr17 31071552 31071584 -58432969 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1056 116 0 0 chr17 31071599 31071745 -58432808 - AluSq/x SINE Alu -166 146 1 189 132 0 0 chr17 31071871 31071909 -58432644 + (A)n Simple_repeat Simple_repeat 1 38 0 202 308 0 0 chr17 31072280 31072332 -58432221 + MIR SINE MIR 79 130 -78 348 292 42 35 chr17 31072337 31072348 -58432205 + MIR SINE MIR 108 117 -145 2205 74 50 7 chr17 31072348 31072646 -58431907 - AluSx SINE Alu -1 311 1 348 292 42 35 chr17 31072646 31072778 -58431775 + MIR SINE MIR 117 252 -10 769 227 23 32 chr17 31072813 31073029 -58431524 + L1ME3A LINE L1 5945 6158 -12 1616 121 121 11 chr17 31073032 31073297 -58431256 - AluSg SINE Alu -16 294 1 207 276 0 0 chr17 31073745 31073803 -58430750 + (TGGA)n Simple_repeat Simple_repeat 2 59 0 216 0 0 0 chr17 31074218 31074242 -58430311 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2164 98 0 43 chr17 31074317 31074643 -58429910 - AluSx SINE Alu 0 312 1 1811 91 102 4 chr17 31075031 31075306 -58429247 + AluSx SINE Alu 1 302 -10 1345 161 14 0 chr17 31078043 31078254 -58426299 - AluJb SINE Alu -25 287 74 1755 102 0 0 chr17 31078936 31079181 -58425372 - AluSg/x SINE Alu -2 310 66 1854 155 0 0 chr17 31079378 31079686 -58424867 - AluJb SINE Alu 0 308 1 416 77 0 0 chr17 31079781 31079833 -58424720 + Alu SINE Alu 2 53 -257 239 102 0 0 chr17 31079958 31080007 -58424546 + Alu SINE Alu 255 303 0 2309 66 13 3 chr17 31080189 31080493 -58424060 - AluY SINE Alu 0 311 5 998 104 17 6 chr17 31080497 31080670 -58423883 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 1617 130 91 0 chr17 31080670 31080924 -58423629 - AluSx SINE Alu -35 277 1 361 63 63 0 chr17 31081833 31081896 -58422657 + G-rich Low_complexity Low_complexity 2 68 0 1752 153 47 7 chr17 31082242 31082421 -58422132 - AluSq SINE Alu 0 313 116 210 37 0 0 chr17 31082421 31082448 -58422105 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1752 153 47 7 chr17 31082448 31082569 -58421984 - AluSq SINE Alu -197 116 1 292 353 81 0 chr17 31084717 31084853 -58419700 + MIR3 SINE MIR 6 152 -56 375 228 59 40 chr17 31084894 31084995 -58419558 + MER5A DNA MER1_type 65 167 -22 206 257 71 62 chr17 31084898 31085011 -58419542 - MER5A DNA MER1_type -57 132 19 * 186 261 130 0 chr17 31086014 31086083 -58418470 - L2 LINE L2 -56 3257 3180 2372 86 0 0 chr17 31086538 31086842 -58417711 - AluSx SINE Alu -7 305 2 379 176 0 93 chr17 31086952 31087145 -58417408 + (CAGCC)n Simple_repeat Simple_repeat 1 175 0 2065 111 10 0 chr17 31089787 31090084 -58414469 - AluSx SINE Alu -12 300 1 25 0 0 0 chr17 31090567 31090592 -58413961 + AT_rich Low_complexity Low_complexity 1 25 0 2136 121 0 0 chr17 31091984 31092297 -58412256 + AluSq SINE Alu 1 313 0 1051 139 52 0 chr17 31092297 31092469 -58412084 + AluSg/x SINE Alu 132 312 0 190 214 24 0 chr17 31092469 31092511 -58412042 - L2 LINE L2 -79 3193 3151 1896 148 0 6 chr17 31093015 31093030 -58411523 - AluJb SINE Alu -3 309 295 228 35 0 0 chr17 31093030 31093059 -58411494 + (TG)n Simple_repeat Simple_repeat 2 30 0 1896 148 0 6 chr17 31093059 31093354 -58411199 - AluJb SINE Alu -17 295 1 653 263 67 10 chr17 31093732 31093926 -58410627 + MIR SINE MIR 46 250 -12 323 270 57 21 chr17 31094076 31094203 -58410350 - MER5A DNA MER1_type -5 173 30 427 183 15 99 chr17 31095248 31095282 -58409271 - LTR2 LTR ERV1 -288 161 126 2146 65 18 0 chr17 31095282 31095597 -58408956 - AluY SINE Alu 0 320 1 427 183 15 99 chr17 31095597 31095692 -58408861 - LTR2 LTR ERV1 -323 126 42 183 219 188 10 chr17 31095969 31096065 -58408488 + L2 LINE L2 3143 3255 -17 388 285 16 16 chr17 31096140 31096263 -58408290 + L1MC4a LINE L1 5777 5899 -1909 245 216 14 54 chr17 31096487 31096561 -58407992 + GA-rich Low_complexity Low_complexity 3 73 0 204 321 71 54 chr17 31096719 31096831 -58407722 - MIR SINE MIR -68 140 27 1926 85 4 4 chr17 31097438 31097697 -58406856 - AluSc SINE Alu -16 293 35 219 286 14 107 chr17 31097734 31097874 -58406679 - MIR SINE MIR -134 128 2 201 279 88 0 chr17 31098053 31098121 -58406432 + L3 LINE CR1 1338 1411 -166 633 269 106 82 chr17 31098153 31098607 -58405946 - L2 LINE L2 -35 3278 2814 1691 129 32 58 chr17 31099020 31099330 -58405223 + AluSx SINE Alu 1 302 -10 274 197 225 2 chr17 31100066 31100198 -58404355 - L1MEc LINE L1 -2346 3869 3702 318 227 303 8 chr17 31100209 31100341 -58404212 - HAL1 LINE L1 -1792 715 545 891 263 122 24 chr17 31100371 31100740 -58403813 - HAL1 LINE L1 -2036 471 67 722 228 125 115 chr17 31101055 31101727 -58402826 - L1MEc LINE L1 -3117 3098 2420 700 317 121 29 chr17 31101808 31102328 -58402225 - L1MEc LINE L1 -3915 2481 1914 326 295 60 62 chr17 31103912 31104132 -58400421 - MIR SINE MIR -46 216 5 5989 111 44 10 chr17 31104682 31105019 -58399534 + L1PB2 LINE L1 4950 5274 -877 183 100 0 0 chr17 31105019 31105049 -58399504 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5989 111 44 10 chr17 31105049 31105884 -58398669 + L1PB2 LINE L1 5274 6151 0 1527 170 95 11 chr17 31106396 31106766 -58397787 - Charlie1 DNA MER1_type -1 2760 2360 280 213 164 0 chr17 31106778 31106839 -58397714 - Charlie1 DNA MER1_type -2690 71 1 918 147 0 0 chr17 31107054 31107197 -58397356 + FLAM_C SINE Alu 1 143 0 393 188 29 0 chr17 31107218 31107287 -58397266 + AluSc SINE Alu 208 278 -21 367 206 109 0 chr17 31109664 31109756 -58394797 - L1ME LINE L1 -350 5771 5670 1230 125 184 0 chr17 31109775 31110061 -58394492 + Tigger3(Golem) DNA MER2_type 6 3022 -7 29 28 0 0 chr17 31110061 31110097 -58394456 + AT_rich Low_complexity Low_complexity 1 36 0 432 308 37 78 chr17 31110168 31110257 -58394296 - L1ME LINE L1 -755 5391 5300 2156 84 3 3 chr17 31110257 31110544 -58394009 + AluSg SINE Alu 2 288 -22 1493 188 22 0 chr17 31110550 31110826 -58393727 - AluJo SINE Alu -30 282 1 432 308 37 78 chr17 31110826 31110970 -58393583 - L1ME LINE L1 -851 5295 5165 2055 117 0 3 chr17 31110970 31111269 -58393284 - AluSx SINE Alu -14 298 1 432 308 37 78 chr17 31111269 31111349 -58393204 - L1ME LINE L1 -981 5165 5083 200 233 0 0 chr17 31111363 31111406 -58393147 + A-rich Low_complexity Low_complexity 1 43 0 392 186 24 97 chr17 31111653 31111777 -58392776 + L1MC4a LINE L1 5581 5695 -2113 197 188 0 0 chr17 31111777 31111809 -58392744 - L2 LINE L2 -17 3296 3265 782 235 125 19 chr17 31111809 31112158 -58392395 + L1MC4a LINE L1 5670 5814 -349 804 200 0 0 chr17 31112641 31112771 -58391782 - FLAM_A SINE Alu -3 130 1 960 219 24 5 chr17 31114698 31114903 -58389650 - MIR SINE MIR -46 216 8 1950 99 3 18 chr17 31115236 31115519 -58389034 + AluSx SINE Alu 1 279 -33 219 69 0 0 chr17 31115519 31115548 -58389005 + (CAA)n Simple_repeat Simple_repeat 2 30 0 193 292 83 42 chr17 31115857 31115953 -58388600 + MIR SINE MIR 51 150 -112 293 243 10 29 chr17 31117036 31117139 -58387414 + L1MC5 LINE L1 7831 7931 -30 2353 71 3 3 chr17 31117152 31117463 -58387090 + AluY SINE Alu 1 311 0 438 270 30 0 chr17 31117794 31117894 -58386659 + MIR SINE MIR 3 105 -157 30 27 0 0 chr17 31117966 31118003 -58386550 + AT_rich Low_complexity Low_complexity 1 37 0 269 194 224 10 chr17 31120551 31120649 -58383904 + L1ME4a LINE L1 5984 6102 -19 2463 71 10 0 chr17 31120882 31121190 -58383363 + AluY SINE Alu 1 311 0 1911 115 38 45 chr17 31123391 31123705 -58380848 + AluSx SINE Alu 1 312 0 2193 119 0 7 chr17 31124529 31124831 -58379722 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr17 31126091 31126112 -58378441 + AT_rich Low_complexity Low_complexity 1 21 0 2447 86 0 0 chr17 31127476 31127777 -58376776 - AluSx SINE Alu -11 301 1 1948 154 10 0 chr17 31129010 31129303 -58375250 + AluJb SINE Alu 1 296 -16 307 75 0 0 chr17 31129307 31129347 -58375206 + MER4E LTR ERV1 653 692 -74 1091 163 0 6 chr17 31129364 31129542 -58375011 + AluJb SINE Alu 120 296 -16 2117 117 14 0 chr17 31129689 31129812 -58374741 + AluSg SINE Alu 1 121 -189 246 32 0 0 chr17 31129812 31129843 -58374710 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 2117 117 14 0 chr17 31129843 31130010 -58374543 + AluSg SINE Alu 121 295 -15 371 250 60 110 chr17 31130235 31130435 -58374118 - MIR SINE MIR -26 236 47 501 269 85 0 chr17 31130552 31130682 -58373871 - MIR SINE MIR -75 187 47 1077 223 50 37 chr17 31131068 31131368 -58373185 - L1ME3 LINE L1 -65 6097 5794 27 49 0 0 chr17 31132174 31132215 -58372338 + AT_rich Low_complexity Low_complexity 1 41 0 511 300 101 9 chr17 31132741 31132968 -58371585 + L2 LINE L2 3057 3304 -9 1822 142 22 4 chr17 31132999 31133274 -58371279 - AluSx SINE Alu -32 280 1 983 188 0 0 chr17 31133965 31134130 -58370423 + AluJb SINE Alu 137 301 -11 1834 169 0 10 chr17 31134786 31135087 -58369466 - AluJo SINE Alu -14 298 1 234 116 0 0 chr17 31135376 31135419 -58369134 + (T)n Simple_repeat Simple_repeat 1 43 0 336 208 236 28 chr17 31135625 31135731 -58368822 + MER5A DNA MER1_type 61 188 -1 319 243 0 0 chr17 31135909 31135979 -58368574 + L2 LINE L2 2475 2544 -770 835 119 8 8 chr17 31135982 31136100 -58368453 - FRAM SINE Alu -18 158 41 195 269 15 60 chr17 31136182 31136249 -58368304 - MER5B DNA MER1_type -49 129 66 598 187 41 65 chr17 31136380 31136503 -58368050 - FLAM_A SINE Alu -13 120 1 1730 163 27 7 chr17 31136529 31136823 -58367730 - AluSx SINE Alu -8 304 5 1320 191 39 39 chr17 31137189 31137471 -58367082 + AluJo SINE Alu 1 282 -30 2346 93 3 3 chr17 31137828 31138129 -58366424 - AluSc SINE Alu -8 301 1 606 247 145 31 chr17 31138214 31138441 -58366112 - MIR SINE MIR -3 259 7 230 276 35 0 chr17 31138517 31138575 -58365978 - L2 LINE L2 0 3313 3254 * 254 312 128 0 chr17 31138574 31138699 -58365854 - MIR SINE MIR -120 142 2 323 345 134 39 chr17 31139148 31139432 -58365121 + L2 LINE L2 2912 3222 -50 21 36 0 0 chr17 31140947 31140975 -58363578 + AT_rich Low_complexity Low_complexity 1 28 0 1008 200 96 0 chr17 31141347 31141567 -58362986 - AluJo SINE Alu -4 308 68 231 147 0 0 chr17 31141701 31141735 -58362818 + U2 snRNA snRNA 2 35 -153 596 217 9 0 chr17 31142383 31142489 -58362064 - U6 snRNA snRNA 0 107 1 1877 128 43 0 chr17 31142666 31142947 -58361606 - AluJb SINE Alu -9 303 11 1936 148 10 7 chr17 31142993 31143297 -58361256 + AluSx SINE Alu 1 305 -7 25 0 0 0 chr17 31143417 31143442 -58361111 + AT_rich Low_complexity Low_complexity 1 25 0 260 176 44 29 chr17 31144793 31144861 -58359692 - L1ME1 LINE L1 -5 6161 6093 243 0 0 0 chr17 31146263 31146290 -58358263 + (CGG)n Simple_repeat Simple_repeat 1 27 0 307 298 70 121 chr17 31147578 31147991 -58356562 - L2 LINE L2 -13 3259 2868 280 369 15 42 chr17 31148243 31148506 -58356047 - L2 LINE L2 -835 2479 2224 680 251 25 69 chr17 31148564 31148716 -58355837 + MER91A DNA MER1_type 3 145 -51 2300 99 3 0 chr17 31148716 31149010 -58355543 - AluSg SINE Alu -15 295 1 680 251 25 69 chr17 31149010 31149060 -58355493 + MER91A DNA MER1_type 145 196 0 405 265 197 16 chr17 31149068 31149317 -58355236 - L2 LINE L2 -1194 2120 1827 1200 145 0 141 chr17 31149879 31150148 -58354405 + AluJo SINE Alu 21 251 -61 2338 99 0 3 chr17 31150351 31150654 -58353899 - AluSq SINE Alu -11 302 1 345 270 31 68 chr17 31150840 31150928 -58353625 + Charlie8 DNA MER1_type 1 82 -259 1674 161 39 4 chr17 31150928 31151207 -58353346 + AluJb SINE Alu 1 289 -23 345 270 31 68 chr17 31151207 31151281 -58353272 + Charlie8 DNA MER1_type 82 157 -184 627 141 91 0 chr17 31151294 31151393 -58353160 + AluJb SINE Alu 2 109 -203 3538 201 139 53 chr17 31151393 31152434 -58352119 + LTR28 LTR ERV1 2 1755 0 1207 173 15 0 chr17 31152434 31152636 -58351917 + AluSq SINE Alu 105 309 -4 288 289 24 12 chr17 31153227 31153310 -58351243 - L2 LINE L2 -303 2969 2886 404 263 80 7 chr17 31153917 31154054 -58350499 - L2 LINE L2 0 3313 3167 888 150 0 0 chr17 31154090 31154223 -58350330 + AluSq/x SINE Alu 1 133 -180 604 281 132 17 chr17 31154223 31154518 -58350035 - L2 LINE L2 -19 3294 2966 3753 129 45 72 chr17 31154563 31155297 -58349256 - LTR8A LTR ERV1 -13 714 1 401 282 29 0 chr17 31155365 31155468 -58349085 - MLT1L LTR MaLR -347 268 163 206 267 178 0 chr17 31155585 31155675 -58348878 - L2 LINE L2 -522 2792 2687 24 0 0 0 chr17 31155701 31155725 -58348828 + AT_rich Low_complexity Low_complexity 1 24 0 425 160 34 17 chr17 31155743 31155862 -58348691 + L1ME LINE L1 5266 5386 -973 3754 138 30 8 chr17 31155907 31156177 -58348376 - MER41B LTR ERV1 -11 624 361 2205 77 0 67 chr17 31156177 31156490 -58348063 - AluSg SINE Alu -18 292 1 3754 138 30 8 chr17 31156490 31156829 -58347724 - MER41B LTR ERV1 -274 361 2 462 320 8 0 chr17 31156892 31157020 -58347533 + L1ME LINE L1 5523 5651 -519 929 187 53 21 chr17 31157030 31157217 -58347336 - MER3 DNA MER1_type -5 204 12 227 261 75 52 chr17 31157218 31157352 -58347201 + L1ME LINE L1 5649 5785 -377 2430 97 0 0 chr17 31157501 31157810 -58346743 - AluSc SINE Alu 0 309 1 2063 134 3 0 chr17 31157945 31158243 -58346310 - AluSg SINE Alu -6 304 6 1919 105 73 0 chr17 31158413 31158699 -58345854 + AluSx SINE Alu 1 307 -5 275 278 30 95 chr17 31158699 31158808 -58345745 - L2 LINE L2 -636 2678 2582 2065 101 13 32 chr17 31158808 31159124 -58345429 + AluSx SINE Alu 1 310 -2 275 278 30 95 chr17 31159124 31159183 -58345370 - L2 LINE L2 -732 2582 2521 314 306 61 50 chr17 31159221 31159401 -58345152 - L2 LINE L2 -160 3112 2931 1986 84 30 4 chr17 31159401 31159663 -58344890 - AluSg SINE Alu -12 298 30 2378 79 3 10 chr17 31159674 31159977 -58344576 - AluY SINE Alu -10 301 1 2257 104 0 0 chr17 31160583 31160881 -58343672 - AluSx SINE Alu -14 298 1 567 43 0 0 chr17 31161156 31161226 -58343327 + (GAAA)n Simple_repeat Simple_repeat 1 70 0 214 148 66 49 chr17 31161404 31161465 -58343088 + MIR SINE MIR 100 161 -101 985 244 0 42 chr17 31161466 31161704 -58342849 - MIR SINE MIR -4 258 31 1924 127 6 41 chr17 31161722 31162036 -58342517 + AluJb SINE Alu 1 303 -9 1902 132 21 7 chr17 31162435 31162722 -58341831 + AluSx SINE Alu 1 291 -21 1258 117 6 6 chr17 31163035 31163214 -58341339 - AluSg/x SINE Alu -12 298 120 1302 160 13 4 chr17 31163250 31163475 -58341078 - AluJb SINE Alu -81 231 5 229 336 126 28 chr17 31163504 31163647 -58340906 - MIR3 SINE MIR -9 199 43 1220 188 0 26 chr17 31164292 31164446 -58340107 - AluJo SINE Alu -24 288 131 252 0 0 0 chr17 31164446 31164474 -58340079 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2155 113 0 0 chr17 31164474 31164756 -58339797 - AluSx SINE Alu -30 282 1 1220 188 0 26 chr17 31164756 31164829 -58339724 - AluJo SINE Alu -179 133 66 715 264 78 30 chr17 31164949 31165180 -58339373 + MIR SINE MIR 2 243 -19 480 267 22 30 chr17 31165443 31165578 -58338975 + MIR SINE MIR 73 206 -56 317 265 24 0 chr17 31165768 31165851 -58338702 + L1MC4 LINE L1 6608 6692 -1350 300 188 0 0 chr17 31165871 31165935 -58338618 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 188 331 62 62 chr17 31166221 31166351 -58338202 + MIR SINE MIR 97 226 -36 223 323 161 0 chr17 31166671 31166795 -58337758 + MIR SINE MIR 46 189 -73 460 217 178 7 chr17 31167030 31167102 -58337451 + Charlie8 DNA MER1_type 88 146 -184 2233 127 13 0 chr17 31167102 31167410 -58337143 + AluSx SINE Alu 1 312 0 460 217 178 7 chr17 31167410 31167489 -58337064 + Charlie8 DNA MER1_type 146 265 -65 24 71 0 0 chr17 31167890 31167918 -58336635 + AT_rich Low_complexity Low_complexity 1 28 0 2006 127 3 7 chr17 31167929 31168213 -58336340 - AluSq SINE Alu -30 283 1 2000 127 7 0 chr17 31168222 31168505 -58336048 - AluSx SINE Alu -25 287 3 30 0 0 0 chr17 31168509 31168539 -58336014 + AT_rich Low_complexity Low_complexity 1 30 0 350 231 218 48 chr17 31169135 31169282 -58335271 - MIR3 SINE MIR -7 201 30 1916 138 34 0 chr17 31170268 31170559 -58333994 - AluSx SINE Alu -10 302 2 2145 129 0 3 chr17 31171768 31172071 -58332482 + AluSx SINE Alu 1 302 -10 2094 142 7 0 chr17 31172079 31172382 -58332171 + AluJb SINE Alu 1 305 -7 424 271 31 89 chr17 31173236 31173421 -58331132 - MIR SINE MIR 0 262 91 1932 121 0 76 chr17 31173421 31173751 -58330802 + AluSx SINE Alu 1 305 -7 424 271 31 89 chr17 31173751 31173790 -58330763 - MIR SINE MIR -171 91 51 2099 129 0 3 chr17 31174339 31174633 -58329920 - AluSg SINE Alu -17 293 1 824 198 10 78 chr17 31175010 31175159 -58329394 + FAM SINE Alu 1 159 -26 2145 135 0 0 chr17 31175159 31175455 -58329098 - AluSx SINE Alu -16 296 1 823 168 0 0 chr17 31175461 31175592 -58328961 - FLAM_C SINE Alu -1 132 2 824 198 10 78 chr17 31175592 31175627 -58328926 + FAM SINE Alu 7 43 -6 482 245 63 63 chr17 31175796 31175939 -58328614 - L2 LINE L2 -7 3265 3123 1801 174 3 0 chr17 31176138 31176425 -58328128 - AluJb SINE Alu -24 288 1 2188 109 10 10 chr17 31176786 31177097 -58327456 - AluSq SINE Alu -2 311 1 1737 169 23 19 chr17 31177190 31177497 -58327056 + AluJo SINE Alu 5 312 0 186 261 0 62 chr17 31179030 31179095 -58325458 - L2 LINE L2 -2 3270 3210 235 250 0 0 chr17 31179483 31179535 -58325018 - L2 LINE L2 0 3313 3262 316 291 82 13 chr17 31179786 31179944 -58324609 + MIR SINE MIR 54 222 -40 226 157 84 60 chr17 31180666 31180749 -58323804 - L1ME4a LINE L1 -104 6017 5933 634 294 106 33 chr17 31180810 31181205 -58323348 - L1MC4a LINE L1 -280 5884 5461 306 0 0 0 chr17 31181340 31181374 -58323179 + (CA)n Simple_repeat Simple_repeat 2 35 0 1505 142 0 0 chr17 31181512 31181724 -58322829 + AluJb SINE Alu 84 295 -17 1112 159 0 70 chr17 31181839 31182073 -58322480 - AluJo SINE Alu 0 315 96 2009 148 3 3 chr17 31182332 31182630 -58321923 - AluSx SINE Alu -14 298 1 325 279 29 15 chr17 31182754 31182890 -58321663 + L1P LINE L1 5212 5349 -797 2237 102 0 40 chr17 31182968 31183347 -58321206 + AluSx SINE Alu 1 366 0 352 203 173 3 chr17 31183356 31183465 -58321088 + L1ME4a LINE L1 5458 5585 -536 366 252 26 33 chr17 31183862 31184013 -58320540 + L1ME4a LINE L1 5734 5883 -238 473 203 20 81 chr17 31184028 31184090 -58320463 - MER5B DNA MER1_type -2 176 112 1639 164 24 47 chr17 31184090 31184388 -58320165 + AluJo SINE Alu 1 291 -21 473 203 20 81 chr17 31184388 31184473 -58320080 - MER5B DNA MER1_type -66 112 38 226 180 16 49 chr17 31184602 31184663 -58319890 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 2304 91 7 7 chr17 31185206 31185503 -58319050 + AluSq SINE Alu 1 297 -16 326 154 68 60 chr17 31185566 31185683 -58318870 + L1ME4a LINE L1 6002 6119 -2 2387 73 7 13 chr17 31185878 31186180 -58318373 - AluY SINE Alu -11 300 1 459 245 192 43 chr17 31187175 31187389 -58317164 - MIR SINE MIR -25 237 2 2301 97 3 40 chr17 31187440 31187761 -58316792 + AluSx SINE Alu 1 309 -3 909 213 107 40 chr17 31188828 31189081 -58315472 - AluSp SINE Alu 0 313 44 644 266 85 11 chr17 31189264 31189452 -58315101 + MIR SINE MIR 61 262 0 791 268 140 24 chr17 31189645 31189723 -58314830 - LTR16C LTR ERVL 0 491 423 2091 131 0 13 chr17 31189723 31190029 -58314524 + AluSx SINE Alu 1 302 -10 791 268 140 24 chr17 31190029 31190279 -58314274 - LTR16C LTR ERVL -68 423 125 666 276 57 11 chr17 31190410 31190674 -58313879 + L1MC4 LINE L1 7741 8016 -26 271 265 73 0 chr17 31190704 31190772 -58313781 - L2 LINE L2 -4 3309 3237 501 227 31 16 chr17 31190780 31190908 -58313645 - MER91B DNA MER1_type -13 177 48 1850 125 26 51 chr17 31191367 31191678 -58312875 + AluJb SINE Alu 1 303 -9 2258 98 24 0 chr17 31192278 31192575 -58311978 - AluSg1 SINE Alu -5 304 1 189 0 0 0 chr17 31192615 31192636 -58311917 + (CTG)n Simple_repeat Simple_repeat 2 22 0 1809 164 14 0 chr17 31192653 31193107 -58311446 - AluSx SINE Alu 0 458 1 666 155 5 136 chr17 31193224 31193437 -58311116 + MER53 DNA DNA 1 185 -4 425 255 10 0 chr17 31193453 31193551 -58311002 - MIR SINE MIR -59 149 51 321 89 0 0 chr17 31193683 31193728 -58310825 + (TG)n Simple_repeat Simple_repeat 2 46 0 2300 84 0 7 chr17 31193899 31194213 -58310340 - AluSx SINE Alu 0 312 1 312 265 41 0 chr17 31194248 31194346 -58310207 - MIR SINE MIR -48 214 113 654 195 5 125 chr17 31194939 31195139 -58309414 + MER69A DNA AcHobo 1 176 -1 2021 118 49 0 chr17 31195511 31195799 -58308754 - AluSx SINE Alu -10 302 1 816 231 65 10 chr17 31196006 31196205 -58308348 - MER63A DNA MER1_type 0 210 1 285 98 0 0 chr17 31196222 31196263 -58308290 + (CA)n Simple_repeat Simple_repeat 2 42 0 288 274 144 7 chr17 31246473 31246626 -58257927 + Charlie7 DNA MER1_type 56 229 -2383 21 0 0 0 chr17 31246653 31246674 -58257879 + AT_rich Low_complexity Low_complexity 1 21 0 749 229 17 42 chr17 31246751 31246991 -58257562 + Charlie7 DNA MER1_type 1475 1708 -904 385 193 29 107 chr17 31247029 31247100 -58257453 + Charlie7 DNA MER1_type 1714 1770 -842 1498 137 7 121 chr17 31247100 31247406 -58257147 + AluJo SINE Alu 38 308 -4 385 193 29 107 chr17 31247406 31247474 -58257079 + Charlie7 DNA MER1_type 1770 1842 -770 1232 69 162 0 chr17 31247474 31247647 -58256906 + L1P LINE L1 4194 4394 -1752 781 216 186 29 chr17 31247657 31248219 -58256334 + Charlie7 DNA MER1_type 1861 2547 -65 187 171 66 0 chr17 31248226 31248302 -58256251 + (TA)n Simple_repeat Simple_repeat 1 81 0 244 185 38 147 chr17 31248309 31248383 -58256170 + Charlie7 DNA MER1_type 2473 2553 -59 1811 171 0 3 chr17 31248383 31248669 -58255884 + AluJb SINE Alu 1 285 -27 216 0 0 0 chr17 31248669 31248693 -58255860 + (CAATA)n Simple_repeat Simple_repeat 2 25 0 244 185 38 147 chr17 31248693 31248774 -58255779 + Charlie7 DNA MER1_type 2551 2612 0 650 154 29 0 chr17 31249156 31249260 -58255293 + U6 snRNA snRNA 1 107 0 443 300 33 24 chr17 31249521 31249731 -58254822 + MIR SINE MIR 51 262 0 1095 296 33 46 chr17 31249994 31250130 -58254423 + HAL1b LINE L1 127 263 -1085 2493 70 0 7 chr17 31250130 31250431 -58254122 + AluY SINE Alu 1 299 -12 1095 296 33 46 chr17 31250431 31250818 -58253735 + HAL1b LINE L1 263 643 -705 2307 111 3 3 chr17 31250818 31251125 -58253428 + AluSx SINE Alu 1 307 -5 1095 296 33 46 chr17 31251125 31251232 -58253321 + HAL1b LINE L1 643 750 -598 2334 89 3 0 chr17 31251954 31252247 -58252306 + AluSc SINE Alu 1 294 -15 871 185 0 62 chr17 31252261 31252439 -58252114 + FRAM SINE Alu 1 167 -9 1531 172 19 22 chr17 31253211 31253375 -58251178 - AluJb SINE Alu -14 298 134 306 0 0 0 chr17 31253375 31253409 -58251144 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 1531 172 19 22 chr17 31253409 31253511 -58251042 - AluJb SINE Alu -178 134 33 2432 97 0 3 chr17 31253514 31253825 -58250728 - AluSg SINE Alu 0 310 1 228 129 0 0 chr17 31253893 31253924 -58250629 + Alu SINE Alu 1 31 -270 366 120 0 0 chr17 31253929 31253979 -58250574 + AluS SINE Alu 17 66 -237 412 133 0 0 chr17 31253982 31254042 -58250511 - AluS SINE Alu -258 60 1 189 0 0 0 chr17 31254529 31254550 -58250003 + (TC)n Simple_repeat Simple_repeat 1 21 0 2123 118 3 7 chr17 31254552 31254849 -58249704 - AluSx SINE Alu -15 297 2 988 147 28 6 chr17 31256042 31256102 -58248451 - L1MB5 LINE L1 0 6174 6117 1462 150 4 4 chr17 31256102 31256329 -58248224 + AluJb SINE Alu 1 227 -85 988 147 28 6 chr17 31256329 31256445 -58248108 - L1MB5 LINE L1 -57 6117 5994 27 29 0 0 chr17 31256452 31256486 -58248067 + AT_rich Low_complexity Low_complexity 1 34 0 816 154 0 0 chr17 31256495 31256612 -58247941 - FLAM_C SINE Alu -26 117 1 2192 124 20 0 chr17 31256662 31256968 -58247585 + AluSx SINE Alu 1 312 0 241 217 29 29 chr17 31257496 31257565 -58246988 + MIR SINE MIR 83 151 -111 686 272 102 92 chr17 31257592 31258122 -58246431 - LTR67 LTR ERVL -19 538 4 991 288 53 55 chr17 31258405 31258901 -58245652 + MLT1K LTR MaLR 63 572 -16 1654 167 3 39 chr17 31259227 31259532 -58245021 + AluJb SINE Alu 1 294 -18 1015 244 114 52 chr17 31259673 31260095 -58244458 - LTR16A1 LTR ERVL 0 457 10 23 78 0 0 chr17 31260159 31260210 -58244343 + AT_rich Low_complexity Low_complexity 1 51 0 1963 151 10 6 chr17 31260340 31260651 -58243902 + AluSx SINE Alu 1 312 0 2180 118 7 7 chr17 31260831 31261137 -58243416 - AluSq SINE Alu -7 306 1 1803 196 21 21 chr17 31261952 31262375 -58242178 + L2 LINE L2 1285 1707 -1607 1989 141 0 21 chr17 31262375 31262488 -58242065 + AluJb SINE Alu 1 115 -197 3802 114 52 22 chr17 31262488 31263084 -58241469 - LTR18B LTR ERVL 0 614 1 1989 141 0 21 chr17 31263084 31263261 -58241292 + AluJb SINE Alu 115 285 -27 206 325 13 10 chr17 31263940 31264095 -58240458 - MIR SINE MIR -3 259 41 27 29 0 0 chr17 31264143 31264177 -58240376 + AT_rich Low_complexity Low_complexity 1 34 0 1083 49 0 0 chr17 31264177 31264300 -58240253 - AluSq/x SINE Alu -181 132 10 731 229 120 0 chr17 31264404 31264596 -58239957 + MIR SINE MIR 18 232 -30 248 211 53 0 chr17 31264922 31264979 -58239574 - L1MA4 LINE L1 -111 6189 6130 613 133 0 78 chr17 31264981 31265109 -58239444 + L1MA4 LINE L1 6183 6300 0 367 319 169 10 chr17 31265805 31266112 -58238441 + L2 LINE L2 2349 2704 -610 221 220 136 0 chr17 31266427 31266486 -58238067 + L2 LINE L2 3246 3312 -1 22 0 0 0 chr17 31267604 31267626 -58236927 + GC_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr17 31267883 31267918 -58236635 + GC_rich Low_complexity Low_complexity 1 35 0 260 258 30 0 chr17 31268690 31268756 -58235797 - MIR3 SINE MIR -12 196 129 221 262 134 39 chr17 31268783 31268974 -58235579 - MIR SINE MIR -21 241 30 214 272 21 147 chr17 31271465 31271656 -58232897 + L2 LINE L2 3147 3313 0 549 284 38 91 chr17 31271930 31272194 -58232359 - MIR SINE MIR -6 256 7 263 119 0 0 chr17 31273159 31273201 -58231352 - MER116 DNA Mariner -1 79 38 316 146 0 0 chr17 31273211 31273259 -58231294 + Alu SINE Alu 1 48 -252 533 302 24 60 chr17 31274043 31274197 -58230356 - L1MC4 LINE L1 0 8042 7884 258 56 0 0 chr17 31274197 31274233 -58230320 + (CA)n Simple_repeat Simple_repeat 1 36 0 533 302 24 60 chr17 31274233 31274498 -58230055 - L1MC4 LINE L1 -158 7884 7638 353 309 132 36 chr17 31274501 31274721 -58229832 - L1MC4 LINE L1 -479 7563 7323 1762 190 3 7 chr17 31274732 31275021 -58229532 - AluJo SINE Alu -24 288 1 3065 153 39 50 chr17 31275103 31275777 -58228776 - L1MB4 LINE L1 -1 6179 5514 2050 127 7 3 chr17 31275805 31276108 -58228445 - AluSq SINE Alu 0 305 2 3018 186 65 28 chr17 31276486 31277350 -58227203 - MER52A LTR ERV1 -1 1277 348 1989 139 14 3 chr17 31278713 31279008 -58225545 - AluSx SINE Alu -14 298 1 325 267 99 10 chr17 31279058 31279159 -58225394 - MIR3 SINE MIR -7 201 92 385 280 9 37 chr17 31279163 31279270 -58225283 - L2 LINE L2 0 3272 3169 2208 125 0 0 chr17 31279526 31279822 -58224731 - AluSp SINE Alu -17 296 1 189 0 0 0 chr17 31279825 31279846 -58224707 + (T)n Simple_repeat Simple_repeat 1 21 0 589 186 81 0 chr17 31279994 31280118 -58224435 + FLAM_A SINE Alu 8 141 -1 514 259 50 96 chr17 31280274 31280513 -58224040 + MIR SINE MIR 2 229 -33 326 312 40 24 chr17 31280527 31280652 -58223901 + L2 LINE L2 3187 3313 0 2311 103 0 0 chr17 31280701 31281002 -58223551 - AluSx SINE Alu -11 301 1 418 204 120 56 chr17 31281142 31281358 -58223195 + MER112 DNA MER1_type 29 258 -2 243 238 0 113 chr17 31282210 31282378 -58222175 + L1M4 LINE L1 2512 2660 -3486 1531 148 23 31 chr17 31282553 31282810 -58221743 + AluJo SINE Alu 3 257 -55 252 0 0 0 chr17 31282810 31282838 -58221715 + (T)n Simple_repeat Simple_repeat 1 28 0 276 30 0 0 chr17 31283586 31283619 -58220934 + (TG)n Simple_repeat Simple_repeat 2 34 0 189 0 0 0 chr17 31283889 31283910 -58220643 + (T)n Simple_repeat Simple_repeat 1 21 0 293 111 37 0 chr17 31285486 31285540 -58219013 + CT-rich Low_complexity Low_complexity 4 59 0 706 204 158 21 chr17 31285558 31285798 -58218755 + Charlie2 DNA MER1_type 89 361 -2421 1007 226 71 38 chr17 31285815 31286143 -58218410 + Charlie2 DNA MER1_type 2239 2588 -274 1830 165 6 22 chr17 31286143 31286458 -58218095 + AluJb SINE Alu 1 310 -2 1007 226 71 38 chr17 31286458 31286581 -58217972 + Charlie2 DNA MER1_type 2588 2705 -157 898 140 0 7 chr17 31286592 31286728 -58217825 + FLAM_C SINE Alu 6 140 -3 398 221 79 14 chr17 31286728 31286868 -58217685 + Charlie2 DNA MER1_type 2714 2862 0 399 43 58 14 chr17 31286897 31286966 -58217587 + (AATAG)n Simple_repeat Simple_repeat 2 73 0 216 184 0 0 chr17 31287496 31287545 -58217008 + A-rich Low_complexity Low_complexity 3 51 0 26 0 0 0 chr17 31287545 31287571 -58216982 + AT_rich Low_complexity Low_complexity 1 26 0 2026 230 42 33 chr17 31287817 31288400 -58216153 - L1MDa LINE L1 -3309 3097 2496 2130 108 3 7 chr17 31288400 31288717 -58215836 + AluSx SINE Alu 1 316 0 2026 230 42 33 chr17 31288717 31288916 -58215637 - L1MDa LINE L1 -3910 2496 2300 1367 218 75 66 chr17 31288936 31289342 -58215211 - L1MDa LINE L1 -4186 2220 1804 2317 77 3 61 chr17 31289342 31289669 -58214884 - AluY SINE Alu -3 308 1 1367 218 75 66 chr17 31289669 31289885 -58214668 - L1MDa LINE L1 -4602 1804 1592 410 138 0 11 chr17 31289904 31289991 -58214562 + (TTCTCC)n Simple_repeat Simple_repeat 6 91 0 1074 140 0 0 chr17 31289999 31290178 -58214375 + (TTC)n Simple_repeat Simple_repeat 1 179 0 1803 165 0 7 chr17 31290193 31290478 -58214075 - AluJb SINE Alu -29 283 1 1251 257 65 44 chr17 31290481 31290976 -58213577 - L1MDa LINE L1 -4815 1591 1075 2209 138 0 0 chr17 31290976 31291287 -58213266 + AluSx SINE Alu 1 311 -1 1251 257 65 44 chr17 31291287 31291495 -58213058 - L1MDa LINE L1 -5331 1075 873 2303 112 3 0 chr17 31291517 31291822 -58212731 + AluSp SINE Alu 1 306 -7 409 257 18 9 chr17 31291848 31291957 -58212596 - L1MDa LINE L1 -5525 884 775 2046 220 82 20 chr17 31292221 31292936 -58211617 + L1ME1 LINE L1 5382 6184 0 343 268 179 12 chr17 31293150 31293318 -58211235 - L1ME LINE L1 -303 5818 5623 2822 77 40 19 chr17 31293715 31294144 -58210409 - MER4C LTR ERV1 0 465 28 408 302 134 65 chr17 31294241 31294791 -58209762 - L1ME LINE L1 -1247 4899 4312 35633 86 6 16 chr17 31295507 31301714 -58202839 - L1PA6 LINE L1 0 6154 11 291 309 10 31 chr17 31302172 31302269 -58202284 + L2 LINE L2 2293 2387 -927 * 2901 219 75 68 chr17 31302266 31302986 -58201567 - L2 LINE L2 -1 3312 2592 2313 76 7 26 chr17 31302986 31303289 -58201264 + AluY SINE Alu 1 297 -14 2901 219 75 68 chr17 31303289 31303759 -58200794 - L2 LINE L2 -721 2592 2127 515 249 319 18 chr17 31303783 31304056 -58200497 + L2 LINE L2 2395 2749 -565 874 137 11 40 chr17 31304125 31304375 -58200178 + L1MB2 LINE L1 5188 5413 -743 2534 150 16 23 chr17 31304375 31304743 -58199810 + L1MB2 LINE L1 5688 6054 -117 2303 68 14 10 chr17 31304743 31305038 -58199515 + AluSp SINE Alu 1 296 -17 2534 150 16 23 chr17 31305038 31305156 -58199397 + L1MB2 LINE L1 6054 6171 0 885 268 75 99 chr17 31305159 31305513 -58199040 + L2 LINE L2 2735 3067 -246 2418 64 0 3 chr17 31305513 31305809 -58198744 + AluSc SINE Alu 1 295 -14 885 268 75 99 chr17 31305809 31306046 -58198507 + L2 LINE L2 3067 3308 -5 464 324 132 53 chr17 31306093 31306815 -58197738 + L2 LINE L2 2258 3059 -213 1628 169 19 8 chr17 31306873 31307134 -58197419 - AluJo SINE Alu -11 301 38 342 130 0 0 chr17 31307134 31307180 -58197373 - L2 LINE L2 -18 3295 3250 331 135 0 0 chr17 31307181 31307233 -58197320 - AluJo SINE Alu -250 52 1 656 153 0 0 chr17 31307240 31307358 -58197195 - L1MB3 LINE L1 0 6183 6066 2130 127 0 3 chr17 31308033 31308333 -58196220 - AluSx SINE Alu -13 299 1 199 273 218 18 chr17 31308356 31308466 -58196087 - MIR3 SINE MIR -10 198 67 681 239 32 0 chr17 31309102 31309257 -58195296 + MIR SINE MIR 103 262 0 22 0 0 0 chr17 31311967 31311989 -58192564 + AT_rich Low_complexity Low_complexity 1 22 0 1348 108 24 14 chr17 31312674 31312887 -58191666 - MER4E LTR ERV1 0 766 552 2073 103 6 40 chr17 31312887 31313236 -58191317 - MER4B LTR ERV1 -273 337 1 2195 132 0 3 chr17 31314065 31314369 -58190184 + AluSx SINE Alu 1 303 -9 2386 83 0 3 chr17 31314611 31314912 -58189641 + AluSg SINE Alu 1 300 -10 2888 167 58 71 chr17 31314920 31315591 -58188962 - LTR8A LTR ERV1 -7 720 58 2284 104 0 3 chr17 31315591 31315889 -58188664 + AluSx SINE Alu 1 297 -15 2888 167 58 71 chr17 31315889 31315947 -58188606 - LTR8A LTR ERV1 -669 58 1 316 204 19 31 chr17 31316438 31316600 -58187953 + CT-rich Low_complexity Low_complexity 2 161 0 1969 142 51 79 chr17 31317074 31317581 -58186972 + L1MB8 LINE L1 5686 6178 0 22 56 0 0 chr17 31317871 31317907 -58186646 + AT_rich Low_complexity Low_complexity 1 36 0 1000 210 81 108 chr17 31318220 31318748 -58185805 - MER34 LTR ERV1 -26 516 3 4291 159 20 44 chr17 31318864 31319359 -58185194 - L1MB5 LINE L1 -54 6120 5615 1834 162 3 17 chr17 31319359 31319649 -58184904 - AluJo SINE Alu -26 286 1 4291 159 20 44 chr17 31319649 31320196 -58184357 - L1MB5 LINE L1 -559 5615 5101 21 71 0 0 chr17 31320589 31320631 -58183922 + AT_rich Low_complexity Low_complexity 1 42 0 526 260 8 0 chr17 31320868 31320995 -58183558 + MER58A DNA MER1_type 2 129 0 332 261 11 11 chr17 31321059 31321151 -58183402 + MER58A DNA MER1_type 127 218 -6 300 179 0 0 chr17 31321212 31321268 -58183285 + L1ME4a LINE L1 6061 6116 -5 1594 179 3 42 chr17 31321317 31321624 -58182929 + AluJo SINE Alu 1 295 -17 1944 194 42 32 chr17 31323912 31324380 -58180173 + L1MB8 LINE L1 4705 5180 -966 2203 167 61 7 chr17 31324380 31324823 -58179730 - MLT1C LTR MaLR 0 467 1 1944 194 42 32 chr17 31324823 31324858 -58179695 + L1MB8 LINE L1 5180 5213 -933 948 178 0 6 chr17 31324858 31325021 -58179532 + FRAM SINE Alu 1 161 -15 4616 141 22 32 chr17 31325022 31326001 -58178552 + L1MB8 LINE L1 5200 6167 -11 1732 181 3 7 chr17 31326095 31326404 -58178149 + AluJb SINE Alu 1 308 -4 1545 200 0 24 chr17 31326525 31326820 -58177733 - AluJo SINE Alu -8 304 17 264 206 163 21 chr17 31327479 31327620 -58176933 - L1MC4a LINE L1 -1675 6133 5973 25 75 0 0 chr17 31327861 31327914 -58176639 + AT_rich Low_complexity Low_complexity 1 53 0 16607 24 0 0 chr17 31328101 31330818 -58173735 - L1PA2 LINE L1 -1 6154 3438 681 260 71 57 chr17 31331724 31332232 -58172321 - L1MC4 LINE L1 -1 8041 7527 1360 137 5 0 chr17 31333209 31333413 -58171140 - AluSg/x SINE Alu -4 306 102 2297 99 0 16 chr17 31333875 31334178 -58170375 + AluSx SINE Alu 1 298 -14 22 35 0 0 chr17 31334213 31334242 -58170311 + AT_rich Low_complexity Low_complexity 1 29 0 7475 32 0 0 chr17 31334870 31336062 -58168491 - L1PA4 LINE L1 0 6155 4960 824 220 13 0 chr17 31336909 31337068 -58167485 + FRAM SINE Alu 1 161 -5 563 238 188 50 chr17 31337152 31337514 -58167039 - MER113 DNA MER1_type? -5 516 105 1602 178 7 27 chr17 31337514 31337807 -58166746 + AluJo SINE Alu 1 287 -25 221 0 0 33 chr17 31337816 31337846 -58166707 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 2109 136 0 10 chr17 31338742 31339052 -58165501 - AluSx SINE Alu -5 307 1 1604 205 17 0 chr17 31339273 31339570 -58164983 + AluJb SINE Alu 5 306 -6 491 261 235 18 chr17 31339692 31339903 -58164650 - MIR SINE MIR 0 262 14 537 249 61 12 chr17 31340007 31340172 -58164381 - MER58A DNA MER1_type -51 173 1 21 0 0 0 chr17 31340253 31340274 -58164279 + AT_rich Low_complexity Low_complexity 1 21 0 380 229 30 70 chr17 31340904 31340966 -58163587 - L1MC4a LINE L1 -1925 5883 5820 2064 128 27 0 chr17 31340966 31341263 -58163290 - AluSx SINE Alu -7 305 1 380 229 30 70 chr17 31341263 31341401 -58163152 - L1MC4a LINE L1 -1988 5820 5691 2351 114 20 6 chr17 31341436 31341786 -58162767 - THE1A LTR MaLR 0 355 1 11859 88 7 1 chr17 31341786 31343356 -58161197 - THE1A-int LTR MaLR 0 1580 1 2605 104 3 0 chr17 31343356 31343710 -58160843 - THE1A LTR MaLR 0 355 1 274 320 165 0 chr17 31344389 31344486 -58160067 - L2 LINE L2 -1 3271 3159 183 129 0 0 chr17 31345064 31345095 -58159458 + (TTG)n Simple_repeat Simple_repeat 3 33 0 2141 129 6 16 chr17 31345254 31345565 -58158988 + AluSx SINE Alu 1 308 -4 2835 143 53 60 chr17 31345696 31346352 -58158201 - L1MB4 LINE L1 -38 6142 5491 1010 211 0 37 chr17 31346358 31346576 -58157977 - AluJb SINE Alu -18 294 85 2285 97 3 16 chr17 31346600 31346911 -58157642 + AluSq SINE Alu 1 307 -6 662 248 13 34 chr17 31346929 31347163 -58157390 - L1MB4 LINE L1 -878 5268 5040 1214 192 58 151 chr17 31347250 31347277 -58157276 - L1MB4 LINE L1 -1092 5054 5026 1970 148 7 3 chr17 31347277 31347581 -58156972 + AluSx SINE Alu 1 305 -7 1214 192 58 151 chr17 31347581 31347923 -58156630 - L1MB4 LINE L1 -1120 5026 4766 2432 46 23 0 chr17 31347923 31348229 -58156324 - L1PA4 LINE L1 -2 6153 5841 1214 192 58 151 chr17 31348229 31348493 -58156060 - L1MB4 LINE L1 -1380 4766 4479 563 286 124 53 chr17 31348973 31349385 -58155168 - L2 LINE L2 -533 2781 2341 276 282 51 51 chr17 31349571 31349688 -58154865 - L2 LINE L2 0 3272 3156 26 0 0 0 chr17 31350092 31350118 -58154435 + AT_rich Low_complexity Low_complexity 1 26 0 928 231 153 31 chr17 31351295 31351344 -58153209 + L2 LINE L2 2954 2996 -317 3697 102 4 4 chr17 31351344 31351855 -58152698 - MER9 LTR ERVK 0 511 1 928 231 153 31 chr17 31351855 31352126 -58152427 + L2 LINE L2 2996 3313 0 293 233 81 47 chr17 31352500 31352586 -58151967 + MIR SINE MIR 6 94 -168 327 282 36 9 chr17 31352691 31352801 -58151752 + L1ME4a LINE L1 5865 5977 -144 1228 144 21 10 chr17 31352801 31352995 -58151558 + AluJb SINE Alu 1 196 -116 300 195 17 102 chr17 31353031 31353149 -58151404 + L1ME4a LINE L1 6009 6116 -5 554 303 81 14 chr17 31357971 31358182 -58146371 + MIR SINE MIR 3 227 -35 246 315 0 0 chr17 31358886 31358975 -58145578 - L1MC4 LINE L1 -1340 6702 6614 429 167 0 0 chr17 31358986 31359064 -58145489 + (TA)n Simple_repeat Simple_repeat 1 78 0 2475 79 0 0 chr17 31359064 31359368 -58145185 - AluSx SINE Alu -8 304 1 24 32 0 0 chr17 31359881 31359912 -58144641 + AT_rich Low_complexity Low_complexity 1 31 0 273 93 0 0 chr17 31360060 31360103 -58144450 - L1MD3 LINE L1 -25 7970 7928 308 256 159 34 chr17 31360470 31360821 -58143732 + L1MEd LINE L1 858 1252 -4867 227 247 0 71 chr17 31360905 31360990 -58143563 + HAL1 LINE L1 1515 1593 -914 22 0 0 0 chr17 31361947 31361969 -58142584 + AT_rich Low_complexity Low_complexity 1 22 0 2463 81 3 7 chr17 31362573 31362882 -58141671 + AluSp SINE Alu 1 308 -5 2251 102 7 3 chr17 31362882 31363185 -58141368 + AluSg SINE Alu 1 305 -5 1963 155 7 0 chr17 31363238 31363529 -58141024 - AluJo SINE Alu -19 293 1 5816 200 210 24 chr17 31363563 31365516 -58139037 + L1MDa LINE L1 21 2337 -4203 2197 71 17 17 chr17 31367250 31367547 -58137006 - AluSc SINE Alu -12 297 1 353 282 203 10 chr17 31367654 31367856 -58136697 - MIR SINE MIR -15 247 7 2338 75 0 33 chr17 31368194 31368500 -58136053 - AluY SINE Alu -15 296 1 685 176 76 0 chr17 31368527 31368658 -58135895 + FLAM_C SINE Alu 1 141 -2 2273 112 0 10 chr17 31368719 31369023 -58135530 + AluSx SINE Alu 3 303 -9 2291 103 3 0 chr17 31369404 31369704 -58134849 - AluSp SINE Alu -12 301 1 875 145 0 0 chr17 31370540 31370671 -58133882 + AluJb SINE Alu 1 131 -181 21 0 0 0 chr17 31370671 31370692 -58133861 + AT_rich Low_complexity Low_complexity 1 21 0 227 246 98 0 chr17 31371274 31371335 -58133218 - MIR SINE MIR -195 67 1 183 80 0 0 chr17 31371812 31371837 -58132716 + (T)n Simple_repeat Simple_repeat 1 25 0 538 233 8 31 chr17 31372028 31372157 -58132396 - L2 LINE L2 0 3313 3188 270 0 0 0 chr17 31373228 31373258 -58131295 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1368 180 9 9 chr17 31373963 31374196 -58130357 - AluJb SINE Alu -14 298 66 251 149 0 21 chr17 31374196 31374243 -58130310 - AluJo/FLAM SINE Alu -190 112 67 548 221 9 9 chr17 31374243 31374356 -58130197 - AluJo/FLAM SINE Alu -199 113 1 2310 96 7 0 chr17 31374432 31374733 -58129820 + AluSq SINE Alu 1 303 -10 333 314 90 33 chr17 31374781 31374928 -58129625 + L1MC4a LINE L1 4023 4160 -1986 2054 104 17 23 chr17 31374928 31375227 -58129326 + AluSq SINE Alu 2 298 -15 333 314 90 33 chr17 31375227 31375567 -58128986 + L1MC4a LINE L1 4160 4538 -1608 537 315 85 48 chr17 31375635 31376095 -58128458 + L1MC4a LINE L1 4626 5102 -1044 437 281 104 28 chr17 31376169 31376457 -58128096 + L1MC4a LINE L1 5314 5623 -2185 2215 111 0 26 chr17 31376460 31376766 -58127787 - AluSg SINE Alu -12 298 1 2462 67 0 0 chr17 31376857 31377156 -58127397 - AluY SINE Alu -12 299 1 2140 122 3 16 chr17 31377226 31377530 -58127023 - AluSx SINE Alu -12 300 1 428 279 35 15 chr17 31377532 31377729 -58126824 + L1MC4a LINE L1 5705 5905 -1903 1956 152 3 3 chr17 31377794 31378091 -58126462 + AluSx SINE Alu 1 297 -15 305 256 139 17 chr17 31379484 31379656 -58124897 - Tigger8 DNA MER2_type -145 521 329 2213 123 0 0 chr17 31380069 31380371 -58124182 + AluSx SINE Alu 1 302 -10 281 302 127 42 chr17 31380445 31380634 -58123919 - MIR SINE MIR -56 206 2 467 192 0 0 chr17 31380702 31380780 -58123773 + AluSg/x SINE Alu 215 292 -17 417 308 16 16 chr17 31380799 31380984 -58123569 + Tigger8 DNA MER2_type 268 452 -214 2101 99 3 23 chr17 31381685 31381989 -58122564 - AluSc SINE Alu -11 298 1 396 276 130 25 chr17 31382386 31382709 -58121844 - L1ME4a LINE L1 -194 5927 5571 207 0 0 0 chr17 31382885 31382908 -58121645 + (CA)n Simple_repeat Simple_repeat 2 24 0 1963 164 0 0 chr17 31383299 31383598 -58120955 - AluSx SINE Alu -11 301 3 1742 80 0 0 chr17 31383687 31383900 -58120653 + AluSg/x SINE Alu 88 300 -10 324 333 130 36 chr17 31384369 31384754 -58119799 + L2 LINE L2 987 1407 -1907 293 299 135 29 chr17 31384939 31385213 -58119340 + L2 LINE L2 1791 2093 -1221 348 256 78 0 chr17 31385215 31385305 -58119248 - MER117 DNA MER1_type -97 100 4 653 202 0 0 chr17 31385828 31385947 -58118606 + FLAM_A SINE Alu 20 138 -4 362 277 114 36 chr17 31386059 31386279 -58118274 + MIR SINE MIR 3 239 -23 2073 134 3 0 chr17 31386469 31386767 -58117786 + AluSx SINE Alu 1 299 -13 395 297 27 138 chr17 31386953 31387286 -58117267 - L2 LINE L2 -9 3263 2968 2910 219 54 27 chr17 31387544 31388035 -58116518 - L1ME1 LINE L1 -5 6161 5638 2443 81 0 0 chr17 31388035 31388333 -58116220 - AluY SINE Alu -13 298 1 2910 219 54 27 chr17 31388333 31388631 -58115922 - L1ME1 LINE L1 -528 5638 5350 2235 210 47 82 chr17 31388653 31389548 -58115005 - L1ME1 LINE L1 -768 5378 4515 * 4481 163 80 24 chr17 31389543 31389574 -58114979 + L1MC2 LINE L1 5249 5277 -1067 2739 7 0 0 chr17 31389574 31389872 -58114681 - AluYa5 SINE Alu -13 298 1 4481 163 80 24 chr17 31389872 31390177 -58114376 + L1MC2 LINE L1 5277 5564 -780 2381 97 0 0 chr17 31390177 31390486 -58114067 - AluSg1 SINE Alu 0 309 1 4481 163 80 24 chr17 31390486 31391198 -58113355 + L1MC2 LINE L1 5564 6344 0 278 213 40 0 chr17 31391737 31391812 -58112741 + (TTTA)n Simple_repeat Simple_repeat 3 80 0 2331 97 0 0 chr17 31392719 31393019 -58111534 - AluSx SINE Alu -12 300 1 351 159 0 0 chr17 31393886 31393955 -58110598 - L1MD1 LINE L1 -11 6231 6163 829 173 20 7 chr17 31393955 31394105 -58110448 + FRAM SINE Alu 10 161 -15 11329 125 39 23 chr17 31394130 31394420 -58110133 + Tigger1 DNA MER2_type 1 285 -2133 1781 172 3 13 chr17 31394420 31394722 -58109831 - AluJb SINE Alu -13 299 1 11329 125 39 23 chr17 31394722 31396125 -58108428 + Tigger1 DNA MER2_type 285 1732 -686 2145 125 0 26 chr17 31396125 31396436 -58108117 + AluSx SINE Alu 1 303 -9 11329 125 39 23 chr17 31396436 31396738 -58107815 + Tigger1 DNA MER2_type 1732 2028 -390 355 281 41 41 chr17 31396740 31396886 -58107667 + MIR SINE MIR 117 262 0 595 245 153 10 chr17 31397413 31397609 -58106944 - MIR SINE MIR -2 260 37 2252 85 3 3 chr17 31397673 31397967 -58106586 - AluSg SINE Alu -16 294 1 977 107 0 8 chr17 31397970 31398101 -58106452 - AluSg SINE Alu -180 130 1 2031 130 0 10 chr17 31398774 31399066 -58105487 - AluSx SINE Alu -23 289 1 1994 159 0 0 chr17 31399124 31399420 -58105133 + AluSx SINE Alu 1 296 -16 469 260 87 109 chr17 31400206 31400225 -58104328 - MIR SINE MIR -1 261 243 2146 117 0 3 chr17 31400225 31400523 -58104030 - AluSq SINE Alu -16 297 1 469 260 87 109 chr17 31400523 31400768 -58103785 - MIR SINE MIR -19 243 3 207 333 46 52 chr17 31400782 31400956 -58103597 + MIR SINE MIR 20 192 -70 351 202 43 0 chr17 31401031 31401125 -58103428 - L1MC4 LINE L1 0 8042 7945 1235 221 39 7 chr17 31402361 31402641 -58101912 + AluJo SINE Alu 1 289 -23 1036 267 214 34 chr17 31402915 31403828 -58100725 - HAL1 LINE L1 -623 1884 808 1012 156 0 75 chr17 31403854 31404040 -58100513 - AluJb SINE Alu -46 266 95 249 299 81 17 chr17 31404192 31404366 -58100187 - HAL1 LINE L1 -2065 442 258 2586 49 0 0 chr17 31404881 31405187 -58099366 + AluY SINE Alu 1 306 -5 2114 113 3 7 chr17 31405407 31405707 -58098846 - AluSx SINE Alu -13 299 1 335 179 30 0 chr17 31406360 31406427 -58098126 - Tigger4(Zombi) DNA MER2_type 0 2731 2663 260 83 0 0 chr17 31406407 31406443 -58098110 - Tigger4(Zombi) DNA MER2_type -2695 36 1 * 22 35 0 0 chr17 31407126 31407155 -58097398 + AT_rich Low_complexity Low_complexity 1 29 0 1666 153 3 48 chr17 31407339 31407634 -58096919 + AluJo SINE Alu 1 282 -30 1770 161 26 19 chr17 31407739 31408049 -58096504 - AluJb SINE Alu 0 312 1 25 65 0 0 chr17 31408192 31408238 -58096315 + AT_rich Low_complexity Low_complexity 1 46 0 2157 133 0 13 chr17 31409860 31410175 -58094378 - AluJb SINE Alu -1 311 1 25 0 0 0 chr17 31411332 31411357 -58093196 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr17 31411552 31411574 -58092979 + (TCTCCC)n Simple_repeat Simple_repeat 1 22 0 8897 44 60 106 chr17 31411582 31412976 -58091577 + SVA Other Other 48 1377 -9 866 150 0 0 chr17 31415115 31415242 -58089311 + FLAM_C SINE Alu 1 127 -6 1792 148 32 3 chr17 31415827 31416110 -58088443 + AluJo SINE Alu 1 291 -21 248 154 96 0 chr17 31416136 31416188 -58088365 - L1MB7 LINE L1 -74 6110 6054 335 186 57 0 chr17 31416519 31416589 -58087964 + MER5A DNA MER1_type 115 188 -1 876 307 20 3 chr17 31416608 31416914 -58087639 - L1ME LINE L1 -379 5791 5481 2133 279 51 24 chr17 31416916 31417107 -58087446 - L1ME LINE L1 -744 5402 5218 1950 120 35 60 chr17 31417107 31417423 -58087130 - AluSg SINE Alu -2 308 1 1855 110 68 74 chr17 31417427 31417736 -58086817 - AluSg SINE Alu -3 307 1 2133 279 51 24 chr17 31417736 31418441 -58086112 - L1ME LINE L1 -930 5216 4485 407 261 92 7 chr17 31418795 31418948 -58085605 + MIR3 SINE MIR 26 191 -17 203 315 11 11 chr17 31419424 31419513 -58085040 + L2 LINE L2 1932 2020 -1294 291 176 81 0 chr17 31420307 31420381 -58084172 - L1MD1 LINE L1 -4 6238 6159 2114 146 85 15 chr17 31420573 31420971 -58083582 + MSTB LTR MaLR 1 426 0 194 370 0 31 chr17 31421456 31421583 -58082970 - L2 LINE L2 -907 2407 2285 245 279 58 0 chr17 31421955 31422041 -58082512 + MIR SINE MIR 101 191 -71 1534 187 13 26 chr17 31422435 31422740 -58081813 - AluJo SINE Alu -11 301 1 290 317 66 44 chr17 31423094 31423321 -58081232 - MIR SINE MIR 0 262 31 5378 40 5 8 chr17 31425191 31425838 -58078715 - SVA Other Other -9 1377 733 805 131 0 22 chr17 31425840 31425977 -58078576 - AluSg1 SINE Alu 0 312 179 746 93 0 0 chr17 31425978 31426075 -58078478 - AluSg1 SINE Alu -211 98 2 6293 90 19 2 chr17 31426303 31427535 -58077018 - L1PA13 LINE L1 0 6163 4912 189 0 0 0 chr17 31427597 31427618 -58076935 + (TTTTTA)n Simple_repeat Simple_repeat 3 23 0 309 241 28 0 chr17 31428224 31428304 -58076249 + MIR SINE MIR 70 152 -56 182 296 46 37 chr17 31428494 31428602 -58075951 + MIR3 SINE MIR 100 208 0 2256 269 71 21 chr17 31428703 31429322 -58075231 - L1ME3A LINE L1 -9 6161 5490 2014 122 0 7 chr17 31429322 31429632 -58074921 - AluSx SINE Alu 0 308 1 2256 269 71 21 chr17 31429632 31429814 -58074739 - L1ME3A LINE L1 -680 5490 5319 430 281 62 0 chr17 31429966 31430112 -58074441 - MIR SINE MIR -94 168 14 429 236 88 60 chr17 31430186 31430402 -58074151 + L2 LINE L2 3092 3313 0 343 314 102 24 chr17 31431482 31431864 -58072689 - L1ME3A LINE L1 -1168 4978 4567 206 62 31 0 chr17 31431960 31431992 -58072561 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 500 200 56 8 chr17 31432165 31432290 -58072263 - MER2 DNA MER2_type -25 320 190 11613 153 68 11 chr17 31432293 31434407 -58070146 + Tigger1 DNA MER2_type 3 2236 -182 262 155 0 17 chr17 31434408 31434466 -58070087 - L1PA16 LINE L1 -12 6154 6098 4445 160 14 59 chr17 31434467 31435599 -58068954 - L1PA16 LINE L1 -105 6061 5005 531 241 76 7 chr17 31435599 31435744 -58068809 + MLT1I LTR MaLR 57 211 -198 2055 180 13 13 chr17 31435773 31436157 -58068396 + MLT1B LTR MaLR 1 384 -6 560 164 112 0 chr17 31436166 31436282 -58068271 + MLT1B-int LTR MaLR 3 131 -1240 3873 205 95 71 chr17 31436528 31437674 -58066879 - MLT-int LTR MaLR -316 1419 246 902 187 22 11 chr17 31437705 31437887 -58066666 + MLT1C LTR MaLR 284 467 0 3243 116 8 8 chr17 31438076 31438560 -58065993 + MER1A DNA MER1_type 46 529 0 363 277 0 0 chr17 31438761 31438898 -58065655 + (CA)n Simple_repeat Simple_repeat 1 137 0 1596 149 111 32 chr17 31440046 31440388 -58064165 + THE1C LTR MaLR 7 375 0 300 143 11 143 chr17 31440899 31440990 -58063563 - SN5 Other centromeric -77 378 300 193 269 13 77 chr17 31440996 31441074 -58063479 - MIR SINE MIR -91 171 99 2168 109 0 0 chr17 31443190 31443493 -58061060 + AluY SINE Alu 1 303 -8 1141 303 40 31 chr17 31446090 31446770 -58057783 + L1MC3 LINE L1 5479 6164 -1621 7442 37 9 0 chr17 31449944 31451600 -58052953 - L1PA5 LINE L1 0 6154 4499 5049 131 8 4 chr17 31452153 31452925 -58051628 - LTR5 LTR ERVK -193 776 2 411 266 65 0 chr17 31454308 31454432 -58050121 + MIR SINE MIR 88 219 -43 263 289 111 33 chr17 31454457 31454637 -58049916 - L2 LINE L2 -12 3301 3108 256 351 36 26 chr17 31463345 31463650 -58040903 + L2 LINE L2 2498 2805 -509 2857 186 51 10 chr17 31463840 31464433 -58040120 + L1PB4 LINE L1 5540 6156 0 418 294 118 45 chr17 31465693 31466010 -58038543 - L1 LINE L1 -753 5393 4228 225 174 0 0 chr17 31466022 31466068 -58038485 + (CTTA)n Simple_repeat Simple_repeat 1 46 0 688 307 110 63 chr17 31467496 31467985 -58036568 - L1M4 LINE L1 -1653 4493 3982 950 100 0 0 chr17 31467987 31468117 -58036436 - AluSp/q SINE Alu -18 295 166 852 114 0 0 chr17 31468306 31468429 -58036124 + FRAM SINE Alu 46 168 -8 5612 132 21 5 chr17 31469309 31470424 -58034129 - L1PA16 LINE L1 -16 6150 5015 2333 57 3 17 chr17 31470426 31470726 -58033827 - AluY SINE Alu -15 296 1 343 195 85 0 chr17 31470882 31470964 -58033589 - L2 LINE L2 0 3313 3225 576 121 0 0 chr17 31471006 31471089 -58033464 + 5S rRNA rRNA 7 89 -32 3885 259 116 31 chr17 31471093 31471224 -58033329 - L2 LINE L2 -90 3223 3105 2239 107 0 16 chr17 31471224 31471534 -58033019 - AluSx SINE Alu -7 305 1 3885 259 116 31 chr17 31471534 31472275 -58032278 - L2 LINE L2 -208 3105 2428 2317 87 0 13 chr17 31472275 31472575 -58031978 + AluY SINE Alu 1 296 -15 3885 259 116 31 chr17 31472575 31472679 -58031874 - L2 LINE L2 -885 2428 2334 2156 103 7 3 chr17 31472679 31472969 -58031584 + AluSg SINE Alu 1 291 -19 3885 259 116 31 chr17 31472969 31473089 -58031464 - L2 LINE L2 -979 2334 2226 1959 145 17 0 chr17 31473089 31473385 -58031168 - AluJb SINE Alu -11 301 1 3885 259 116 31 chr17 31473385 31474187 -58030366 - L2 LINE L2 -1087 2226 1152 2314 103 0 0 chr17 31474249 31474550 -58030003 + AluSx SINE Alu 1 301 -11 1279 117 0 0 chr17 31474663 31474843 -58029710 - AluSg/x SINE Alu -12 300 121 299 106 0 0 chr17 31474846 31474893 -58029660 - Alu SINE Alu 0 300 254 1625 169 3 14 chr17 31474893 31475183 -58029370 + AluJb SINE Alu 9 295 -17 385 203 30 54 chr17 31475365 31475423 -58029130 - MLT1G LTR MaLR -5 585 527 2143 95 10 20 chr17 31475423 31475718 -58028835 + AluSx SINE Alu 1 292 -20 385 203 30 54 chr17 31475718 31475878 -58028675 - MLT1G LTR MaLR -63 527 306 1406 189 20 122 chr17 31475964 31476423 -58028130 + MLT2D LTR ERVL 1 412 -2 2386 88 0 3 chr17 31476424 31476721 -58027832 - AluSc SINE Alu -13 296 1 570 273 53 47 chr17 31476778 31477097 -58027456 - L1M4 LINE L1 -1953 4193 3873 1765 107 8 0 chr17 31477421 31477663 -58026890 - AluSp SINE Alu 0 313 70 1151 133 28 19 chr17 31477663 31477874 -58026679 - LTR7 LTR ERV1 0 450 238 385 111 0 32 chr17 31477944 31478007 -58026546 - LTR7 LTR ERV1 -389 61 1 632 190 81 81 chr17 31478222 31478356 -58026197 + MER2 DNA MER2_type 1 137 -208 1307 178 148 19 chr17 31478356 31478620 -58025933 - AluJo SINE Alu -4 298 1 632 190 81 81 chr17 31478620 31478696 -58025857 + MER2 DNA MER2_type 136 211 -134 996 187 89 9 chr17 31478940 31479154 -58025399 + AluJo SINE Alu 82 312 0 235 241 0 13 chr17 31479155 31479234 -58025319 + L1M4 LINE L1 4146 4223 -1923 230 147 0 0 chr17 31479314 31479348 -58025205 + Alu SINE Alu 252 285 -17 2356 101 0 19 chr17 31479399 31479717 -58024836 - AluSq SINE Alu -1 312 1 204 283 40 20 chr17 31479743 31479842 -58024711 - MER5A DNA MER1_type -85 104 4 225 306 38 82 chr17 31479848 31480031 -58024522 - L3 LINE CR1 -160 1417 1243 1865 130 63 7 chr17 31480050 31480335 -58024218 - AluSx SINE Alu -11 301 1 365 279 19 51 chr17 31480497 31480562 -58023991 - L1ME4a LINE L1 -14 6107 6041 1923 134 34 10 chr17 31480562 31480853 -58023700 + AluSx SINE Alu 2 299 -13 365 279 19 51 chr17 31480853 31480945 -58023608 - L1ME4a LINE L1 -80 6041 5955 460 207 60 9 chr17 31480984 31481100 -58023453 - L1ME4a LINE L1 -22 6099 5978 2269 112 6 6 chr17 31481115 31481427 -58023126 + AluSx SINE Alu 1 312 0 1258 238 72 83 chr17 31481438 31481702 -58022851 + L1M4 LINE L1 3312 3577 -2569 2141 108 0 3 chr17 31481702 31481988 -58022565 + AluSc SINE Alu 2 286 -23 1258 238 72 83 chr17 31481988 31482373 -58022180 + L1M4 LINE L1 3577 3955 -2191 2020 105 0 89 chr17 31482373 31482535 -58022018 + AluSg SINE Alu 1 121 -189 2478 71 0 43 chr17 31482535 31482859 -58021694 + AluY SINE Alu 1 310 -1 2020 105 0 89 chr17 31482859 31483020 -58021533 + AluSg SINE Alu 121 295 -15 1258 238 72 83 chr17 31483020 31483100 -58021453 + L1M4 LINE L1 3955 4034 -2112 285 125 0 0 chr17 31483100 31483140 -58021413 - Alu SINE Alu -263 40 1 351 143 32 0 chr17 31483143 31483206 -58021347 - AluJb SINE Alu 0 302 238 4263 159 25 52 chr17 31483214 31484107 -58020446 - LTR5 LTR ERVK 0 969 101 8608 60 6 19 chr17 31484109 31484961 -58019592 - MER11C LTR ERVK -2 1069 232 2560 71 0 0 chr17 31484961 31485272 -58019281 + AluY SINE Alu 1 311 0 8608 60 6 19 chr17 31485272 31485502 -58019051 - MER11C LTR ERVK -839 232 1 579 106 0 138 chr17 31485502 31485547 -58019006 - LTR5 LTR ERVK -863 106 56 185 0 40 0 chr17 31485547 31485572 -58018981 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 7734 24 0 0 chr17 31485572 31486575 -58017978 - L1PA3 LINE L1 -13 6142 5141 579 106 0 138 chr17 31486575 31486651 -58017902 - LTR5 LTR ERVK -911 58 1 1504 180 33 4 chr17 31486651 31486895 -58017658 - AluJb SINE Alu -61 251 1 1882 111 18 90 chr17 31487375 31487709 -58016844 - AluSx SINE Alu -2 310 1 1493 142 25 82 chr17 31488211 31488528 -58016025 + AluJb SINE Alu 1 299 -13 22 35 0 0 chr17 31489129 31489158 -58015395 + GC_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr17 31489598 31489633 -58014920 + GC_rich Low_complexity Low_complexity 1 35 0 420 67 0 0 chr17 31492294 31492354 -58012199 + (CA)n Simple_repeat Simple_repeat 2 61 0 2098 80 25 0 chr17 31493130 31493426 -58011127 - AluY SINE Alu 0 303 1 1251 259 93 56 chr17 31493597 31494245 -58010308 - HAL1 LINE L1 -312 2195 1524 478 140 0 105 chr17 31494255 31494369 -58010184 - Charlie5 DNA MER1_type -32 2580 2479 600 178 9 0 chr17 31494370 31494477 -58010076 + FLAM_A SINE Alu 2 109 -33 509 167 54 152 chr17 31494531 31494789 -58009764 - MER33 DNA MER1_type -249 75 1 621 192 28 22 chr17 31494841 31494995 -58009558 - L1P1 LINE L1 -637 5518 5357 474 215 31 54 chr17 31495883 31496013 -58008540 - MLT1K LTR MaLR -15 573 447 2376 41 3 31 chr17 31496535 31496850 -58007703 - AluY SINE Alu 0 307 1 21 57 0 0 chr17 31496986 31497021 -58007532 + AT_rich Low_complexity Low_complexity 1 35 0 300 53 0 0 chr17 31497372 31497410 -58007143 + (TG)n Simple_repeat Simple_repeat 1 38 0 249 211 0 0 chr17 31497411 31497463 -58007090 + L1MC4 LINE L1 6652 6703 -1339 192 174 130 0 chr17 31498554 31498600 -58005953 - MIR SINE MIR -5 257 206 197 182 91 18 chr17 31498895 31498950 -58005603 - L2 LINE L2 -8 3305 3247 205 308 162 0 chr17 31499089 31499206 -58005347 - MIR SINE MIR -79 183 48 330 233 196 31 chr17 31499284 31499447 -58005106 - MIR SINE MIR 0 262 73 2285 110 3 3 chr17 31500349 31500659 -58003894 + AluSq SINE Alu 1 310 -3 2940 103 15 8 chr17 31500859 31501347 -58003206 - MER1A DNA MER1_type 0 529 1 2296 113 7 0 chr17 31501600 31501909 -58002644 + AluSp SINE Alu 1 311 -2 203 184 0 0 chr17 31501958 31501996 -58002557 + (TA)n Simple_repeat Simple_repeat 1 38 0 23 68 0 0 chr17 31502222 31502266 -58002287 + AT_rich Low_complexity Low_complexity 1 44 0 282 87 0 0 chr17 31502351 31502397 -58002156 + (TA)n Simple_repeat Simple_repeat 1 46 0 2544 76 0 13 chr17 31502399 31502715 -58001838 - AluSp SINE Alu -1 312 1 22 0 0 0 chr17 31502761 31502783 -58001770 + AT_rich Low_complexity Low_complexity 1 22 0 326 127 6 45 chr17 31502920 31502991 -58001562 + FAM SINE Alu 29 91 -84 248 302 22 62 chr17 31503686 31503865 -58000688 - MIR3 SINE MIR 0 208 37 2062 136 3 0 chr17 31503988 31504282 -58000271 - AluSc SINE Alu -14 295 1 485 76 59 0 chr17 31504782 31504900 -57999653 + (TA)n Simple_repeat Simple_repeat 1 125 0 222 91 0 0 chr17 31505642 31505675 -57998878 + (A)n Simple_repeat Simple_repeat 1 33 0 198 0 0 0 chr17 31506015 31506037 -57998516 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 26 50 0 0 chr17 31506371 31506411 -57998142 + AT_rich Low_complexity Low_complexity 1 40 0 1681 219 148 28 chr17 31507029 31507359 -57997194 + L1MC4 LINE L1 6960 7249 -793 1685 166 13 46 chr17 31507359 31507666 -57996887 - AluJb SINE Alu -14 298 2 1681 219 148 28 chr17 31507666 31507971 -57996582 + L1MC4 LINE L1 7249 7671 -371 689 225 193 0 chr17 31508141 31508359 -57996194 + MIR SINE MIR 2 261 -1 1950 139 4 0 chr17 31508692 31508973 -57995580 - AluJb SINE Alu -17 295 14 843 273 83 16 chr17 31509068 31509431 -57995122 - L1MC4 LINE L1 -43 7999 7613 1286 98 0 0 chr17 31510648 31510821 -57993732 + AluY SINE Alu 125 297 -14 1192 160 26 120 chr17 31510821 31510858 -57993695 - L1M4 LINE L1 -866 5280 5241 1921 143 9 19 chr17 31510858 31511173 -57993380 + AluJb SINE Alu 1 312 0 1192 160 26 120 chr17 31511173 31511254 -57993299 - L1M4 LINE L1 -905 5241 5154 2085 148 0 3 chr17 31511254 31511565 -57992988 + AluSx SINE Alu 1 310 -2 1192 160 26 120 chr17 31511565 31511795 -57992758 - L1M4 LINE L1 -992 5154 4964 767 192 0 0 chr17 31511825 31511955 -57992598 - FLAM_C SINE Alu -12 131 2 223 178 0 0 chr17 31511961 31512006 -57992547 + (TA)n Simple_repeat Simple_repeat 2 46 0 965 170 0 0 chr17 31512011 31512164 -57992389 + AluJb SINE Alu 138 290 -22 853 80 0 43 chr17 31512164 31512352 -57992201 + (TA)n Simple_repeat Simple_repeat 1 180 0 843 273 83 16 chr17 31515581 31515944 -57988609 + L1MC4 LINE L1 7613 7999 -43 1950 139 4 0 chr17 31516039 31516320 -57988233 + AluJb SINE Alu 14 295 -17 689 225 193 0 chr17 31516653 31516871 -57987682 - MIR SINE MIR -1 261 2 1681 219 148 28 chr17 31517041 31517346 -57987207 - L1MC4 LINE L1 -371 7671 7404 1685 166 13 46 chr17 31517346 31517653 -57986900 + AluJb SINE Alu 2 298 -14 1681 219 148 28 chr17 31517653 31517983 -57986570 - L1MC4 LINE L1 -638 7404 6960 26 50 0 0 chr17 31518601 31518641 -57985912 + AT_rich Low_complexity Low_complexity 1 40 0 198 0 0 0 chr17 31518975 31518997 -57985556 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 213 94 0 0 chr17 31519337 31519369 -57985184 + (T)n Simple_repeat Simple_repeat 1 32 0 2148 143 0 3 chr17 31522351 31522659 -57981894 + AluJb SINE Alu 1 307 -5 225 94 0 0 chr17 31522730 31522762 -57981791 + (T)n Simple_repeat Simple_repeat 1 32 0 2202 104 17 0 chr17 31523961 31524258 -57980295 + AluY SINE Alu 1 302 -9 832 127 0 0 chr17 31524342 31524452 -57980101 + AluJb SINE Alu 178 287 -25 632 278 51 68 chr17 31524463 31524930 -57979623 - L1M4 LINE L1 -1529 4617 4159 1095 172 91 10 chr17 31524931 31525140 -57979413 - AluJo SINE Alu -5 307 82 532 248 37 51 chr17 31525366 31525442 -57979111 - MER2 DNA MER2_type -134 211 135 1174 190 145 22 chr17 31525442 31525711 -57978842 + AluJo SINE Alu 1 302 0 532 248 37 51 chr17 31525711 31525848 -57978705 - MER2 DNA MER2_type -210 135 1 1384 168 8 120 chr17 31526380 31526731 -57977822 + AluJb SINE Alu 1 312 0 806 189 0 20 chr17 31526741 31526889 -57977664 - FRAM SINE Alu -21 155 11 2091 148 3 0 chr17 31526901 31527204 -57977349 - AluJb SINE Alu -8 304 1 222 37 0 0 chr17 31527299 31527326 -57977227 + (GA)n Simple_repeat Simple_repeat 2 28 0 189 0 0 0 chr17 31527413 31527434 -57977119 + (TG)n Simple_repeat Simple_repeat 2 22 0 1139 157 73 70 chr17 31527472 31527758 -57976795 - L1MB7 LINE L1 -16 6168 5882 1892 154 14 7 chr17 31527836 31528122 -57976431 - AluJb SINE Alu -24 288 1 2536 172 44 2 chr17 31528125 31528602 -57975951 - L1MB3 LINE L1 -44 6139 5643 1966 81 0 0 chr17 31528604 31528839 -57975714 - AluSq SINE Alu -78 235 1 226 286 0 0 chr17 31528842 31528898 -57975655 - MER66B LTR ERV1 -430 56 1 403 190 9 86 chr17 31528898 31529014 -57975539 - AluJb SINE Alu -119 193 87 465 288 52 2 chr17 31529053 31529293 -57975260 + MLT1J2 LTR MaLR 125 419 -31 451 258 106 71 chr17 31529344 31529359 -57975194 - MIR SINE MIR -57 205 192 1524 157 122 16 chr17 31529359 31529614 -57974939 - AluJo SINE Alu -30 282 1 451 258 106 71 chr17 31529614 31529670 -57974883 - MIR SINE MIR -70 192 139 1667 145 0 52 chr17 31529670 31529939 -57974614 - AluSx SINE Alu -21 291 37 451 258 106 71 chr17 31529939 31530064 -57974489 - MIR SINE MIR -123 139 1 196 293 13 40 chr17 31530266 31530341 -57974212 + MIR SINE MIR 190 262 0 768 218 93 35 chr17 31530360 31530563 -57973990 + MIR SINE MIR 10 229 -33 21 0 0 0 chr17 31531072 31531093 -57973460 + AT_rich Low_complexity Low_complexity 1 21 0 778 112 0 77 chr17 31531545 31531688 -57972865 + FLAM_C SINE Alu 1 132 -1 2440 107 0 0 chr17 31531775 31532117 -57972436 + AluSx SINE Alu 1 342 0 554 291 29 8 chr17 31532254 31532498 -57972055 - L2 LINE L2 -258 3055 2807 2353 94 13 0 chr17 31532502 31532809 -57971744 + AluSx SINE Alu 2 312 0 2190 113 10 13 chr17 31533057 31533367 -57971186 + AluSx SINE Alu 1 309 -3 1066 238 151 48 chr17 31533367 31533830 -57970723 - MLT1H LTR MaLR -17 532 22 2497 51 3 0 chr17 31533949 31534241 -57970312 - AluY SINE Alu -18 293 1 312 27 0 0 chr17 31535237 31535274 -57969279 + (T)n Simple_repeat Simple_repeat 1 37 0 332 278 183 0 chr17 31536012 31536138 -57968415 + MER91A DNA MER1_type 1 149 -47 2254 99 3 0 chr17 31536138 31536458 -57968095 - AluSq SINE Alu 0 322 2 679 146 54 8 chr17 31536491 31536621 -57967932 + AluJ SINE Alu 2 137 -175 1913 149 31 0 chr17 31536635 31536924 -57967629 + AluJb SINE Alu 1 298 -14 741 268 160 26 chr17 31537091 31537434 -57967119 - L2 LINE L2 0 3313 2925 1014 192 0 12 chr17 31537523 31537690 -57966863 + AluJ SINE Alu 138 302 -10 2454 73 3 7 chr17 31537699 31538000 -57966553 + AluSg SINE Alu 1 300 -10 355 278 117 61 chr17 31538159 31538243 -57966310 - MIR SINE MIR -26 236 158 2271 112 0 0 chr17 31538243 31538537 -57966016 - AluSx SINE Alu -18 294 1 355 278 117 61 chr17 31538537 31538632 -57965921 - MIR SINE MIR -104 158 47 2194 118 0 0 chr17 31539341 31539637 -57964916 - AluSx SINE Alu -16 296 1 1242 237 219 17 chr17 31539885 31540361 -57964192 - MLT1E2 LTR MaLR 0 626 55 945 269 44 62 chr17 31540722 31540948 -57963605 + L2 LINE L2 2872 3101 -212 2027 135 3 0 chr17 31540948 31541230 -57963323 - AluSx SINE Alu -14 298 16 945 269 44 62 chr17 31541230 31541431 -57963122 + L2 LINE L2 3101 3293 -20 1873 153 14 3 chr17 31541431 31541725 -57962828 + AluSx SINE Alu 1 297 -15 945 269 44 62 chr17 31541725 31541746 -57962807 + L2 LINE L2 3293 3313 0 911 228 149 94 chr17 31542264 31542350 -57962203 + MLT1D LTR MaLR 1 81 -424 2338 97 3 0 chr17 31542350 31542648 -57961905 - AluSq SINE Alu -14 299 1 1859 173 0 13 chr17 31542651 31542952 -57961601 - AluJb SINE Alu -15 297 1 911 228 149 94 chr17 31542952 31542977 -57961576 + MLT1D LTR MaLR 82 104 -401 1837 137 29 177 chr17 31542977 31543116 -57961437 - LTR26B LTR ERV1 0 531 373 2189 126 7 16 chr17 31543116 31543426 -57961127 + AluSx SINE Alu 5 311 -1 1837 137 29 177 chr17 31543426 31543711 -57960842 - LTR26B LTR ERV1 -158 373 47 2430 97 7 0 chr17 31543711 31544021 -57960532 + AluSx SINE Alu 1 312 0 1837 137 29 177 chr17 31544021 31544073 -57960480 - LTR26B LTR ERV1 -484 47 163 2432 90 0 0 chr17 31544073 31544374 -57960179 - AluSp SINE Alu -10 303 3 1837 137 29 177 chr17 31544374 31544516 -57960037 - LTR26B LTR ERV1 -367 164 3 911 228 149 94 chr17 31544516 31544869 -57959684 + MLT1D LTR MaLR 104 496 -9 847 125 0 23 chr17 31544970 31545098 -57959455 - AluSg/x SINE Alu -4 308 184 1570 124 22 91 chr17 31545098 31545373 -57959180 + AluSx SINE Alu 44 299 -13 1157 75 0 0 chr17 31545373 31545507 -57959046 + AluSg SINE Alu 1 134 -176 2194 104 0 30 chr17 31545507 31545804 -57958749 + AluY SINE Alu 1 288 -23 2970 152 44 46 chr17 31545809 31546271 -57958282 + L1MA7 LINE L1 5635 6096 -195 2391 104 0 0 chr17 31546271 31546578 -57957975 - AluSg1 SINE Alu -2 307 1 2970 152 44 46 chr17 31546578 31546634 -57957919 + L1MA7 LINE L1 6096 6151 -140 728 178 0 8 chr17 31546634 31546763 -57957790 + FLAM_C SINE Alu 1 128 -5 2970 152 44 46 chr17 31546763 31546901 -57957652 + L1MA7 LINE L1 6151 6291 0 2117 120 11 0 chr17 31546917 31547200 -57957353 + AluSx SINE Alu 11 296 -16 2018 110 67 0 chr17 31547202 31547484 -57957069 + AluSg SINE Alu 1 301 -9 568 182 36 18 chr17 31547484 31547566 -57956987 + GA-rich Low_complexity Low_complexity 1 80 -88 2464 65 0 49 chr17 31547566 31547891 -57956662 + AluY SINE Alu 1 309 -2 568 182 36 18 chr17 31547891 31547973 -57956580 + GA-rich Low_complexity Low_complexity 80 168 0 2164 130 0 3 chr17 31548302 31548595 -57955958 + AluSx SINE Alu 1 292 -20 478 179 259 0 chr17 31548606 31548718 -57955835 + AluJo SINE Alu 3 143 -169 399 247 34 62 chr17 31548718 31548764 -57955789 - MLT1G1 LTR MaLR -451 144 98 2049 128 152 11 chr17 31548764 31549139 -57955414 + MSTA LTR MaLR 1 428 0 399 247 34 62 chr17 31549139 31549238 -57955315 - MLT1G1 LTR MaLR -497 98 3 510 221 0 33 chr17 31549238 31549360 -57955193 + LTR16C LTR ERVL 374 491 0 2163 128 28 75 chr17 31549530 31549561 -57954992 - MSTA LTR MaLR -20 408 377 2277 106 0 0 chr17 31549561 31549881 -57954672 - AluSx SINE Alu 0 320 1 2163 128 28 75 chr17 31549881 31550097 -57954456 - MSTA LTR MaLR -51 377 185 2185 134 0 7 chr17 31550097 31550403 -57954150 + AluSx SINE Alu 1 304 -8 2163 128 28 75 chr17 31550403 31550580 -57953973 - MSTA LTR MaLR -243 185 1 2443 72 0 3 chr17 31550668 31550961 -57953592 + AluY SINE Alu 1 292 -19 266 271 43 0 chr17 31551228 31551298 -57953255 + MIR SINE MIR 118 190 -72 673 144 0 32 chr17 31551301 31551426 -57953127 - FLAM_C SINE Alu 0 143 23 2179 120 23 19 chr17 31551458 31551593 -57952960 + AluSq SINE Alu 2 135 -178 2625 64 0 0 chr17 31551593 31551904 -57952649 + AluY SINE Alu 1 311 0 2179 120 23 19 chr17 31551904 31552076 -57952477 + AluSq SINE Alu 135 310 -3 401 304 24 8 chr17 31552079 31552204 -57952349 - MIR SINE MIR -13 249 123 1876 176 0 26 chr17 31552977 31553289 -57951264 - AluJo SINE Alu -7 305 2 2002 138 0 46 chr17 31553293 31553474 -57951079 - AluSx SINE Alu 0 312 151 2177 103 21 3 chr17 31553474 31553764 -57950789 - AluSg SINE Alu -15 295 1 2002 138 0 46 chr17 31553764 31553909 -57950644 - AluSx SINE Alu -161 151 1 808 154 0 22 chr17 31553912 31554048 -57950505 - FLAM_A SINE Alu 0 133 1 1463 231 117 5 chr17 31554074 31554519 -57950034 - L1ME3 LINE L1 -24 6138 5644 1290 180 124 8 chr17 31554520 31554770 -57949783 - AluJo SINE Alu -32 280 2 249 284 45 0 chr17 31554852 31554919 -57949634 - L2 LINE L2 0 3313 3244 508 147 0 0 chr17 31554942 31555017 -57949536 + AluS SINE Alu 2 76 -237 2166 113 6 26 chr17 31555126 31555437 -57949116 - AluSx SINE Alu -7 305 1 490 122 11 0 chr17 31555464 31555554 -57948999 - FLAM_A SINE Alu -10 132 42 367 185 49 12 chr17 31555567 31555648 -57948905 - MIR SINE MIR -109 153 70 247 316 7 37 chr17 31556194 31556330 -57948223 + GA-rich Low_complexity Low_complexity 4 135 0 326 243 7 57 chr17 31556931 31557071 -57947482 + GA-rich Low_complexity Low_complexity 3 135 0 281 344 0 48 chr17 31557035 31557224 -57947329 + G-rich Low_complexity Low_complexity 1 180 0 * 417 300 75 12 chr17 31558351 31558511 -57946042 + MIR SINE MIR 34 203 -59 220 319 11 11 chr17 31558550 31558641 -57945912 + L2 LINE L2 2865 2955 -317 2247 88 51 0 chr17 31558642 31558937 -57945616 - AluSx SINE Alu -2 310 1 2708 48 0 0 chr17 31558938 31559249 -57945304 - AluY SINE Alu 0 311 1 2173 116 17 3 chr17 31559249 31559541 -57945012 - AluSx SINE Alu -16 296 1 624 250 21 0 chr17 31559607 31559751 -57944802 + MIR SINE MIR 18 164 -98 698 185 0 15 chr17 31559754 31559889 -57944664 + FLAM_A SINE Alu 1 133 0 677 75 0 21 chr17 31559947 31560041 -57944512 + AluS SINE Alu 2 93 -220 1633 132 58 0 chr17 31560046 31560289 -57944264 - AluSq SINE Alu -56 257 1 993 125 13 13 chr17 31560411 31560563 -57943990 - AluSx SINE Alu -159 153 2 203 361 0 12 chr17 31560656 31560739 -57943814 + MIR SINE MIR 92 173 -89 1035 207 28 0 chr17 31561153 31561366 -57943187 - MER20 DNA MER1_type 0 219 1 2457 90 3 0 chr17 31561812 31562123 -57942430 - AluSp SINE Alu 0 313 2 1976 145 0 42 chr17 31562306 31562444 -57942109 + AluSx SINE Alu 1 143 -169 2053 91 4 8 chr17 31562444 31562708 -57941845 + AluSc SINE Alu 38 300 -9 2203 93 0 4 chr17 31562708 31562986 -57941567 + AluSp SINE Alu 1 278 -35 183 100 0 0 chr17 31562990 31563020 -57941533 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1976 145 0 42 chr17 31563020 31563185 -57941368 + AluSx SINE Alu 145 297 -15 483 323 79 16 chr17 31563190 31563379 -57941174 + MIR SINE MIR 55 255 -7 1470 196 82 11 chr17 31563434 31563546 -57941007 + AluJo SINE Alu 1 104 -208 2060 125 7 14 chr17 31563546 31563843 -57940710 + AluSx SINE Alu 1 295 -17 1470 196 82 11 chr17 31563843 31564011 -57940542 + AluJo SINE Alu 104 301 -11 422 331 12 0 chr17 31564060 31564220 -57940333 - L2 LINE L2 -687 2627 2466 1904 97 0 0 chr17 31564250 31564487 -57940066 + AluSg SINE Alu 3 239 -71 1874 174 0 0 chr17 31564489 31564782 -57939771 + AluJb SINE Alu 11 303 -9 1792 139 28 6 chr17 31564782 31565106 -57939447 + L1MA8 LINE L1 5958 6288 -3 2087 153 3 0 chr17 31565116 31565417 -57939136 + AluSx SINE Alu 7 308 -4 1061 147 0 7 chr17 31565417 31565567 -57938986 + AluJo/FRAM SINE Alu 134 282 -30 288 0 0 0 chr17 31565573 31565605 -57938948 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 874 245 166 59 chr17 31565662 31565872 -57938681 - MLT1E LTR MaLR -159 434 248 2071 125 17 0 chr17 31565872 31566159 -57938394 + AluSg SINE Alu 1 292 -18 874 245 166 59 chr17 31566159 31566340 -57938213 - MLT1E LTR MaLR -345 248 1 842 295 134 8 chr17 31566359 31566725 -57937828 + LTR16C LTR ERVL 71 482 -9 1541 189 57 79 chr17 31566726 31567074 -57937479 - MLT1C LTR MaLR 0 467 113 1721 174 3 61 chr17 31567074 31567264 -57937289 - AluJb SINE Alu -3 309 110 2058 152 3 0 chr17 31567264 31567567 -57936986 + AluSx SINE Alu 1 304 -8 2374 62 0 59 chr17 31567569 31567876 -57936677 + AluY SINE Alu 3 291 -20 1721 174 3 61 chr17 31567876 31568010 -57936543 - AluJb SINE Alu -203 109 1 1541 189 57 79 chr17 31568010 31568131 -57936422 - MLT1C LTR MaLR -354 113 8 323 246 12 18 chr17 31568173 31568344 -57936209 + G-rich Low_complexity Low_complexity 1 170 0 303 157 5 78 chr17 31568397 31568588 -57935965 + GA-rich Low_complexity Low_complexity 1 177 0 2107 76 80 0 chr17 31568739 31569027 -57935526 - AluSq SINE Alu 0 309 1 2265 110 3 0 chr17 31569041 31569351 -57935202 - AluY SINE Alu 0 311 1 457 174 0 0 chr17 31569353 31569439 -57935114 - AluS SINE Alu 0 311 226 273 290 47 0 chr17 31569449 31569556 -57934997 - L2 LINE L2 -1190 2124 2013 252 322 76 0 chr17 31569582 31569700 -57934853 - L2 LINE L2 -1430 1884 1758 696 180 16 0 chr17 31569708 31569836 -57934717 + MER2 DNA MER2_type 2 131 -214 320 174 0 14 chr17 31569836 31569905 -57934648 + (TA)n Simple_repeat Simple_repeat 1 68 0 1501 129 0 9 chr17 31569910 31570120 -57934433 - AluSx SINE Alu -56 256 49 22 0 0 0 chr17 31570120 31570142 -57934411 + AT_rich Low_complexity Low_complexity 1 22 0 37 32 0 16 chr17 31570223 31570249 -57934304 + AT_rich Low_complexity Low_complexity 1 26 -35 2416 68 3 46 chr17 31570249 31570382 -57934171 + AluY SINE Alu 1 138 -173 2244 100 23 3 chr17 31570382 31570508 -57934045 + AluSc SINE Alu 1 123 -186 189 0 0 0 chr17 31570508 31570529 -57934024 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2244 100 23 3 chr17 31570529 31570703 -57933850 + AluSc SINE Alu 123 307 -2 2416 68 3 46 chr17 31570703 31570893 -57933660 + AluY SINE Alu 138 310 -1 37 32 0 16 chr17 31570893 31570928 -57933625 + AT_rich Low_complexity Low_complexity 26 61 0 180 0 0 0 chr17 31570931 31570951 -57933602 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1503 192 4 15 chr17 31570951 31571222 -57933331 - AluJo SINE Alu -32 280 13 2052 125 0 10 chr17 31571248 31571536 -57933017 - AluSx SINE Alu -1 311 27 414 184 13 0 chr17 31571542 31571618 -57932935 + MER2 DNA MER2_type 268 344 -1 243 224 0 35 chr17 31571624 31571682 -57932871 - MLT1D LTR MaLR -8 459 404 1069 253 80 50 chr17 31571736 31571969 -57932584 - MLT1D LTR MaLR -53 452 227 1993 141 0 20 chr17 31571969 31572274 -57932279 - AluJb SINE Alu -1 311 13 1069 253 80 50 chr17 31572274 31572304 -57932249 - MLT1D LTR MaLR -278 227 199 1903 154 29 16 chr17 31572304 31572610 -57931943 - AluSx SINE Alu -2 310 1 1069 253 80 50 chr17 31572610 31572784 -57931769 - MLT1D LTR MaLR -306 199 1 695 172 50 89 chr17 31572833 31572879 -57931674 + MLT1A1 LTR MaLR 1 47 -318 1837 167 0 13 chr17 31572879 31573191 -57931362 - AluSq SINE Alu -5 308 1 695 172 50 89 chr17 31573191 31573324 -57931229 + MLT1A1 LTR MaLR 47 173 -192 2018 132 3 3 chr17 31573374 31573677 -57930876 + AluSx SINE Alu 1 303 -9 225 307 40 0 chr17 31573870 31573945 -57930608 + L2 LINE L2 2627 2704 -610 378 107 0 0 chr17 31573968 31574024 -57930529 + (TCCCC)n Simple_repeat Simple_repeat 1 56 0 1911 145 10 0 chr17 31574024 31574320 -57930233 - AluSx SINE Alu -13 299 1 1721 174 0 10 chr17 31574320 31574618 -57929935 - AluJo SINE Alu -17 295 1 311 303 34 17 chr17 31574722 31574841 -57929712 + L2 LINE L2 3176 3296 -17 2242 113 0 0 chr17 31574871 31575180 -57929373 + AluSx SINE Alu 1 309 -3 360 88 0 0 chr17 31575294 31575351 -57929202 + (CA)n Simple_repeat Simple_repeat 2 58 0 233 260 151 0 chr17 31575894 31575967 -57928586 + L2 LINE L2 3163 3246 -26 300 303 0 0 chr17 31576466 31576542 -57928011 + Charlie8 DNA MER1_type 26 101 -2316 2307 53 0 0 chr17 31576544 31576873 -57927680 - AluY SINE Alu 0 329 1 1845 105 3 21 chr17 31576904 31577211 -57927342 - AluSx SINE Alu 0 312 11 2289 101 3 0 chr17 31577281 31577587 -57926966 + AluSx SINE Alu 3 309 -3 1719 133 63 11 chr17 31577858 31578144 -57926409 + AluJo SINE Alu 3 303 -9 641 226 67 38 chr17 31578278 31578646 -57925907 - MLT1C LTR MaLR 0 467 69 508 195 220 0 chr17 31578647 31578765 -57925788 + MLT1A1 LTR MaLR 2 145 -220 3738 137 0 33 chr17 31578775 31579028 -57925525 + L1PA15 LINE L1 5576 5836 -329 2027 124 7 3 chr17 31579028 31579327 -57925226 + AluSx SINE Alu 1 300 -12 3738 137 0 33 chr17 31579327 31579479 -57925074 + L1PA15 LINE L1 5836 5991 -174 2168 124 0 0 chr17 31579479 31579785 -57924768 + AluSx SINE Alu 1 306 -6 3738 137 0 33 chr17 31579785 31579986 -57924567 + L1PA15 LINE L1 5991 6163 -2 1829 152 3 19 chr17 31579996 31580130 -57924423 + AluJb SINE Alu 1 136 -176 2195 104 0 3 chr17 31580130 31580427 -57924126 + AluSc SINE Alu 1 296 -13 1829 152 3 19 chr17 31580427 31580608 -57923945 + AluJb SINE Alu 136 311 -1 1604 115 0 0 chr17 31580615 31580833 -57923720 + AluSx SINE Alu 1 218 -94 574 123 0 0 chr17 31580833 31580914 -57923639 + MLT1A1 LTR MaLR 224 304 -61 2224 115 0 0 chr17 31580917 31581222 -57923331 + AluSx SINE Alu 1 305 -7 1912 174 13 19 chr17 31581230 31581604 -57922949 + Tigger2a DNA MER2_type 1 372 -62 1286 122 6 0 chr17 31581606 31581787 -57922766 + AluJo SINE Alu 1 182 -130 2105 98 3 3 chr17 31581793 31582088 -57922465 - AluSx SINE Alu -17 295 1 2109 121 3 0 chr17 31582125 31582432 -57922121 - AluSx SINE Alu -4 308 1 35 41 0 0 chr17 31583063 31583112 -57921441 + AT_rich Low_complexity Low_complexity 1 49 0 1658 150 10 42 chr17 31583151 31583337 -57921216 - AluJo SINE Alu -9 303 129 2350 84 0 0 chr17 31583337 31583633 -57920920 + AluSx SINE Alu 2 297 -15 1658 150 10 42 chr17 31583633 31583759 -57920794 - AluJo SINE Alu -183 129 1 2028 142 0 0 chr17 31583774 31584076 -57920477 - AluSx SINE Alu -10 302 1 1523 166 25 0 chr17 31584087 31584371 -57920182 - L1MB7 LINE L1 -54 6130 5840 387 331 20 7 chr17 31584383 31584534 -57920019 - L1ME3 LINE L1 -25 6137 5985 2188 109 0 7 chr17 31584553 31584857 -57919696 - AluSx SINE Alu -8 304 3 784 197 165 0 chr17 31584859 31585047 -57919506 + MER20 DNA MER1_type 1 219 0 1293 273 31 3 chr17 31585065 31585424 -57919129 - L1ME3 LINE L1 -205 5957 5589 490 290 24 0 chr17 31585434 31585558 -57918995 + Charlie8 DNA MER1_type 89 215 -2202 516 238 26 33 chr17 31586961 31587112 -57917441 - L2 LINE L2 -1 3312 3163 323 73 0 0 chr17 31587137 31587178 -57917375 + FLAM SINE Alu 71 111 -22 1281 122 0 0 chr17 31587258 31587439 -57917114 - AluSg/x SINE Alu -10 300 120 2515 55 0 0 chr17 31587445 31587756 -57916797 - AluY SINE Alu 0 311 1 203 361 98 30 chr17 31587832 31587965 -57916588 + L2 LINE L2 2511 2652 -662 997 87 0 0 chr17 31587980 31588107 -57916446 - FLAM_C SINE Alu -5 128 2 32 26 0 0 chr17 31588114 31588153 -57916400 + AT_rich Low_complexity Low_complexity 1 39 0 834 177 0 7 chr17 31588153 31588300 -57916253 - FRAM SINE Alu -22 154 9 207 139 0 0 chr17 31588311 31588347 -57916206 + (TTCC)n Simple_repeat Simple_repeat 1 36 0 1837 141 23 3 chr17 31588347 31588651 -57915902 - AluSx SINE Alu -2 310 1 2051 86 7 21 chr17 31588658 31588811 -57915742 - AluSg SINE Alu -16 294 145 8161 52 1 0 chr17 31588811 31589779 -57914774 - LTR5 LTR ERVK 0 969 1 2051 86 7 21 chr17 31589779 31589916 -57914637 - AluSg SINE Alu -165 145 8 2221 183 52 68 chr17 31589930 31590490 -57914063 - L1MB5 LINE L1 -2 6172 5621 1956 133 0 17 chr17 31590490 31590791 -57913762 - AluJo SINE Alu -16 296 1 2221 183 52 68 chr17 31590791 31590830 -57913723 - L1MB5 LINE L1 -553 5621 5583 2287 76 0 0 chr17 31590838 31591168 -57913385 - AluY SINE Alu 0 311 1 1133 178 111 41 chr17 31591276 31591546 -57913007 - 7SLRNA srpRNA srpRNA -31 289 1 237 313 75 15 chr17 31591550 31591684 -57912869 + L2 LINE L2 2692 2833 -481 1627 160 15 0 chr17 31591698 31591967 -57912586 + AluJb SINE Alu 1 273 -39 2063 107 7 0 chr17 31592051 31592342 -57912211 - AluSx SINE Alu -19 293 1 231 306 56 0 chr17 31592380 31592452 -57912101 + MIR SINE MIR 117 192 -70 220 180 250 40 chr17 31592584 31592684 -57911869 + L2 LINE L2 2420 2540 -774 2260 99 3 0 chr17 31592689 31593001 -57911552 + AluSp SINE Alu 1 313 0 1849 131 0 44 chr17 31593009 31593347 -57911206 + AluSx SINE Alu 1 325 0 533 160 14 3 chr17 31593491 31593715 -57910838 + AluJo SINE Alu 14 296 -16 661 86 0 2 chr17 31593721 31593942 -57910611 + AluSx SINE Alu 6 274 -35 285 51 0 0 chr17 31593945 31593984 -57910569 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 28 86 0 0 chr17 31597838 31597908 -57906645 + GC_rich Low_complexity Low_complexity 1 70 0 35 63 0 0 chr17 31598014 31598077 -57906476 + GC_rich Low_complexity Low_complexity 1 63 0 21 89 0 0 chr17 31598181 31598237 -57906316 + GC_rich Low_complexity Low_complexity 1 56 0 267 79 0 0 chr17 31598356 31598394 -57906159 + (T)n Simple_repeat Simple_repeat 1 38 0 27 0 0 0 chr17 31599017 31599044 -57905509 + GC_rich Low_complexity Low_complexity 1 27 0 351 165 0 0 chr17 31599784 31599869 -57904684 + CT-rich Low_complexity Low_complexity 2 86 0 182 111 0 0 chr17 31601865 31601892 -57902661 - L2 LINE L2 -96 3217 3191 2148 118 0 10 chr17 31601928 31602241 -57902312 + AluSx SINE Alu 1 310 -2 397 340 117 26 chr17 31602376 31602753 -57901800 + L2 LINE L2 2887 3297 -16 1597 185 10 10 chr17 31602760 31603062 -57901491 + AluJo SINE Alu 3 304 -8 649 248 33 56 chr17 31603309 31603523 -57901030 - MER20 DNA MER1_type 0 219 11 1876 130 3 19 chr17 31603556 31603863 -57900690 + AluJb SINE Alu 5 306 -6 769 202 153 0 chr17 31603869 31604052 -57900501 - MER58C DNA MER1_type -1 214 4 586 242 25 93 chr17 31604138 31604433 -57900120 + L2 LINE L2 2796 3110 -203 2297 106 0 0 chr17 31604433 31604745 -57899808 + AluSx SINE Alu 1 312 0 1721 142 51 7 chr17 31604752 31605047 -57899506 + AluJo SINE Alu 1 308 -4 586 242 25 93 chr17 31605047 31605109 -57899444 + L2 LINE L2 3116 3133 -180 243 212 61 15 chr17 31605126 31605192 -57899361 + L2 LINE L2 3237 3305 -8 217 268 0 12 chr17 31605619 31605701 -57898852 - L2 LINE L2 -216 3056 2976 691 263 127 20 chr17 31606140 31606563 -57897990 + L2 LINE L2 2648 3104 -209 265 326 30 8 chr17 31606987 31607119 -57897434 - L2 LINE L2 -556 2758 2624 1697 182 14 0 chr17 31607197 31607488 -57897065 - AluJo SINE Alu -17 295 1 416 252 113 118 chr17 31607511 31607846 -57896707 - L2 LINE L2 -5 3308 2973 1856 157 0 3 chr17 31607846 31608145 -57896408 - AluJb SINE Alu -14 298 1 416 252 113 118 chr17 31608145 31608599 -57895954 - L2 LINE L2 -340 2973 2379 212 279 81 12 chr17 31608667 31608753 -57895800 - MIR SINE MIR -91 171 80 1917 141 0 10 chr17 31609315 31609612 -57894941 + AluJb SINE Alu 19 312 0 374 306 82 6 chr17 31609824 31609994 -57894559 + MIR SINE MIR 23 205 -57 1752 177 57 73 chr17 31610186 31610258 -57894295 - MLT1C LTR MaLR 0 467 395 1828 156 0 7 chr17 31610258 31610553 -57894000 - AluJb SINE Alu -11 301 9 1752 177 57 73 chr17 31610553 31610920 -57893633 - MLT1C LTR MaLR -72 395 35 1646 174 32 0 chr17 31610920 31611201 -57893352 - AluJo SINE Alu -16 296 7 2011 119 0 32 chr17 31611663 31611973 -57892580 + AluSx SINE Alu 1 300 -12 1993 132 0 28 chr17 31611973 31612292 -57892261 + AluSx SINE Alu 1 310 -2 1227 229 71 68 chr17 31612345 31612521 -57892032 + MLT1B LTR MaLR 2 176 -214 1932 147 0 6 chr17 31612521 31612833 -57891720 + AluJb SINE Alu 1 310 -2 1227 229 71 68 chr17 31612833 31613036 -57891517 + MLT1B LTR MaLR 176 382 -8 291 329 147 0 chr17 31613077 31613220 -57891333 - MIR SINE MIR -29 233 70 1462 146 9 0 chr17 31613411 31613644 -57890909 - AluSp SINE Alu -4 309 75 2648 32 0 0 chr17 31613644 31613952 -57890601 - AluY SINE Alu -1 310 1 666 80 11 0 chr17 31613952 31614040 -57890513 - AluSp SINE Alu -223 90 2 705 99 0 13 chr17 31614046 31614166 -57890387 + L1MA9 LINE L1 5831 5942 -215 369 266 141 73 chr17 31614304 31614353 -57890200 - L1ME4a LINE L1 -38 6083 6039 2162 96 14 0 chr17 31614353 31614644 -57889909 - AluSq SINE Alu -18 295 1 369 266 141 73 chr17 31614644 31614696 -57889857 - L1ME4a LINE L1 -82 6039 5992 2271 86 0 0 chr17 31614696 31614998 -57889555 - AluSc SINE Alu -7 302 1 369 266 141 73 chr17 31614998 31615143 -57889410 - L1ME4a LINE L1 -129 5992 5819 1868 134 10 3 chr17 31615177 31615468 -57889085 - AluSx SINE Alu -19 293 1 994 155 150 0 chr17 31615632 31615819 -57888734 - Tigger3(Golem) DNA MER2_type -7 3022 2808 1131 132 0 16 chr17 31616489 31616671 -57887882 - AluSg/x SINE Alu 0 312 134 1876 148 7 0 chr17 31616671 31616968 -57887585 - AluSx SINE Alu -13 299 1 844 227 46 10 chr17 31617212 31617406 -57887147 + AluSg/x SINE Alu 112 312 0 704 192 16 0 chr17 31617427 31617552 -57887001 - FLAM_A SINE Alu -8 134 8 1693 121 4 37 chr17 31617721 31617859 -57886694 + AluSx SINE Alu 6 132 -180 2252 78 0 19 chr17 31617859 31618166 -57886387 + AluSp SINE Alu 1 301 -12 1693 121 4 37 chr17 31618166 31618299 -57886254 + AluSx SINE Alu 132 268 -44 1200 134 24 38 chr17 31618774 31618983 -57885570 + AluJo SINE Alu 1 206 -106 1218 145 21 89 chr17 31619083 31619131 -57885422 + L1MA9 LINE L1 6010 6060 -252 1688 154 14 10 chr17 31619131 31619423 -57885130 + AluJo SINE Alu 3 295 -17 1218 145 21 89 chr17 31619423 31619471 -57885082 + L1MA9 LINE L1 6060 6110 -202 1824 153 14 0 chr17 31619471 31619759 -57884794 + AluSx SINE Alu 1 292 -20 1218 145 21 89 chr17 31619759 31619986 -57884567 + L1MA9 LINE L1 6110 6312 0 1384 191 14 83 chr17 31620007 31620170 -57884383 + L1MB7 LINE L1 5735 5863 -321 1667 154 0 32 chr17 31620170 31620455 -57884098 + AluJb SINE Alu 1 276 -36 1384 191 14 83 chr17 31620455 31620642 -57883911 + L1MB7 LINE L1 5863 6061 -123 1911 105 79 0 chr17 31620642 31620919 -57883634 + AluSx SINE Alu 1 299 -13 345 293 25 38 chr17 31621035 31621192 -57883361 - L2 LINE L2 -761 2553 2399 245 186 35 47 chr17 31621449 31621535 -57883018 - MIR SINE MIR -77 131 47 981 100 0 14 chr17 31621580 31621720 -57882833 - FRAM SINE Alu -10 166 29 1289 67 0 6 chr17 31621820 31621984 -57882569 - AluY SINE Alu -148 163 1 1651 109 83 4 chr17 31621994 31622259 -57882294 - AluSc SINE Alu -23 286 1 302 216 0 0 chr17 31622505 31622556 -57881997 + L1MC4 LINE L1 6653 6703 -1339 1717 158 42 0 chr17 31622557 31622841 -57881712 - AluSx SINE Alu -16 296 1 867 189 0 0 chr17 31622841 31622989 -57881564 - AluJb SINE Alu -5 307 160 1374 186 31 41 chr17 31622861 31622998 -57881555 - AluJb SINE Alu -15 287 150 2024 138 3 35 chr17 31622998 31623182 -57881371 - AluSx SINE Alu -3 309 138 2148 115 0 7 chr17 31623182 31623478 -57881075 - AluSq SINE Alu -19 294 1 2024 138 3 35 chr17 31623478 31623612 -57880941 - AluSx SINE Alu -174 138 1 1374 186 31 41 chr17 31623612 31623630 -57880923 - AluJb SINE Alu -152 150 133 2306 73 3 10 chr17 31623630 31623930 -57880623 - AluY SINE Alu -13 298 1 1374 186 31 41 chr17 31623930 31624063 -57880490 - AluJb SINE Alu -169 133 1 2090 119 3 29 chr17 31624155 31624291 -57880262 + AluSx SINE Alu 1 139 -173 2278 100 0 0 chr17 31624291 31624595 -57879958 + AluSc SINE Alu 1 304 0 2090 119 3 29 chr17 31624595 31624768 -57879785 + AluSx SINE Alu 139 303 -9 2437 78 0 0 chr17 31625950 31626243 -57878310 - AluSg SINE Alu -17 293 1 194 0 39 0 chr17 31626308 31626334 -57878219 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1943 123 7 7 chr17 31626336 31626612 -57877941 - AluSx SINE Alu -36 276 1 1877 144 7 10 chr17 31626666 31626958 -57877595 + AluSx SINE Alu 3 293 -19 1936 131 27 0 chr17 31626999 31627296 -57877257 + AluSx SINE Alu 1 305 -7 198 214 18 0 chr17 31627347 31627403 -57877150 - MER5C DNA MER1_type -7 317 261 270 157 98 0 chr17 31627881 31627932 -57876621 - AluYb8 SINE Alu -44 264 209 1336 212 3 43 chr17 31628035 31628161 -57876392 + AluJo SINE Alu 2 131 -171 2039 118 3 3 chr17 31628161 31628448 -57876105 - AluSg SINE Alu -23 287 1 1336 212 3 43 chr17 31628448 31628623 -57875930 + AluJo SINE Alu 131 291 -11 22 0 0 0 chr17 31628624 31628646 -57875907 + AT_rich Low_complexity Low_complexity 1 22 0 872 215 0 6 chr17 31628649 31628812 -57875741 + FRAM SINE Alu 4 165 -1 503 204 0 19 chr17 31628827 31628930 -57875623 + FRAM SINE Alu 66 166 -10 371 291 43 8 chr17 31629305 31629422 -57875131 + L2 LINE L2 3134 3254 -18 2156 106 0 14 chr17 31629547 31629863 -57874690 + AluSg SINE Alu 1 310 0 2152 96 0 4 chr17 31629900 31630219 -57874334 + AluSc SINE Alu 1 318 0 1635 208 0 0 chr17 31630225 31630519 -57874034 + AluJo SINE Alu 1 294 -18 2032 127 3 20 chr17 31630522 31630821 -57873732 + AluSx SINE Alu 1 294 -18 2117 138 0 0 chr17 31631070 31631374 -57873179 + AluSx SINE Alu 1 304 -8 1663 168 31 11 chr17 31631562 31631848 -57872705 + AluJo SINE Alu 1 292 -20 2183 133 0 0 chr17 31631848 31632149 -57872404 + AluSx SINE Alu 1 301 -11 2408 65 20 0 chr17 31632149 31632442 -57872111 + AluY SINE Alu 1 299 -12 2565 59 0 3 chr17 31632844 31633149 -57871404 + AluY SINE Alu 2 305 -6 632 139 0 56 chr17 31633331 31633439 -57871114 + AluJb SINE Alu 192 293 -19 2309 105 0 13 chr17 31633509 31633822 -57870731 - AluSg SINE Alu -1 309 1 186 43 0 0 chr17 31634396 31634419 -57870134 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 249 179 0 0 chr17 31634422 31634461 -57870092 - Alu SINE Alu -178 124 86 1179 156 37 28 chr17 31634461 31634679 -57869874 - AluJo SINE Alu -92 220 1 2174 88 14 3 chr17 31634893 31635190 -57869363 - AluSq SINE Alu -13 300 1 30 0 0 0 chr17 31635299 31635329 -57869224 + AT_rich Low_complexity Low_complexity 1 30 0 1537 100 131 4 chr17 31635332 31635466 -57869087 - AluJb SINE Alu -19 293 177 333 68 0 0 chr17 31635466 31635510 -57869043 + (TAG)n Simple_repeat Simple_repeat 1 44 0 1537 100 131 4 chr17 31635510 31635635 -57868918 - AluJb SINE Alu -135 177 1 194 219 0 0 chr17 31635641 31635682 -57868871 + MIR SINE MIR 108 148 -114 215 157 20 0 chr17 31637250 31637301 -57867252 + (TA)n Simple_repeat Simple_repeat 1 52 0 2274 76 3 10 chr17 31637306 31637596 -57866957 - AluSg SINE Alu -22 288 1 22 0 0 0 chr17 31637599 31637621 -57866932 + AT_rich Low_complexity Low_complexity 1 22 0 707 153 14 62 chr17 31638590 31638734 -57865819 - FLAM_C SINE Alu 0 143 7 2982 132 73 2 chr17 31638753 31639298 -57865255 - L1MB7 LINE L1 -16 6168 5585 1814 159 40 3 chr17 31639309 31639610 -57864943 - AluJb SINE Alu 0 312 1 1712 159 3 52 chr17 31639612 31639826 -57864727 - AluJo SINE Alu -18 294 98 1899 94 8 122 chr17 31639826 31640178 -57864375 - AluSq SINE Alu -1 312 1 1712 159 3 52 chr17 31640178 31640272 -57864281 - AluJo SINE Alu -214 98 1 310 226 88 20 chr17 31640703 31640805 -57863748 - L2 LINE L2 -1 3312 3204 1611 98 0 5 chr17 31640980 31641194 -57863359 + AluSg/x SINE Alu 79 291 -19 2040 122 14 10 chr17 31641562 31641856 -57862697 + AluSx SINE Alu 1 295 -17 2005 107 0 0 chr17 31641925 31642178 -57862375 + AluSq SINE Alu 1 253 -60 1778 131 7 43 chr17 31642278 31642425 -57862128 - AluSx SINE Alu -40 272 138 2161 127 0 3 chr17 31642425 31642732 -57861821 - AluSg SINE Alu -4 306 1 1778 131 7 43 chr17 31642732 31642866 -57861687 - AluSx SINE Alu -174 138 1 2177 122 3 0 chr17 31642870 31643173 -57861380 - AluSx SINE Alu -8 304 1 764 156 8 0 chr17 31643184 31643312 -57861241 - FLAM_C SINE Alu -10 133 5 2057 114 26 19 chr17 31643324 31643632 -57860921 - AluSx SINE Alu 0 312 3 465 274 45 21 chr17 31643872 31644040 -57860513 + L1ME LINE L1 5601 5769 -386 1841 127 14 4 chr17 31644042 31644318 -57860235 + AluJb SINE Alu 11 289 -23 1345 147 18 5 chr17 31644329 31644553 -57860000 + AluJo SINE Alu 86 312 0 2144 98 9 58 chr17 31644674 31645000 -57859553 + AluSg SINE Alu 1 310 0 2139 119 17 0 chr17 31645023 31645325 -57859228 + AluSx SINE Alu 1 307 -5 2147 96 3 7 chr17 31645332 31645647 -57858906 + AluSx SINE Alu 2 312 0 286 278 22 33 chr17 31648362 31648452 -57856101 - MIR SINE MIR -149 113 25 2358 100 0 3 chr17 31648522 31648821 -57855732 - AluSx SINE Alu -14 298 1 2324 100 3 0 chr17 31651016 31651317 -57853236 - AluSx SINE Alu -10 302 1 2153 115 0 20 chr17 31651374 31651394 -57853159 - AluSx SINE Alu -12 300 281 186 71 0 0 chr17 31651394 31651422 -57853131 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 2153 115 0 20 chr17 31651422 31651706 -57852847 - AluSx SINE Alu -31 281 2 607 244 0 0 chr17 31651841 31651960 -57852593 - FLAM_A SINE Alu -10 123 5 1072 181 267 7 chr17 31652440 31652728 -57851825 - MLT1A1 LTR MaLR -2 363 1 1225 171 9 28 chr17 31652788 31653005 -57851548 - MER20 DNA MER1_type 0 219 7 189 239 30 45 chr17 31653245 31653312 -57851241 - MIR SINE MIR -75 187 122 746 140 7 60 chr17 31653822 31653972 -57850581 - FLAM_C SINE Alu 0 143 2 1304 77 71 0 chr17 31654126 31654308 -57850245 - AluY SINE Alu -12 299 105 26 30 0 0 chr17 31654706 31654739 -57849814 + AT_rich Low_complexity Low_complexity 1 33 0 1770 137 4 4 chr17 31655174 31655436 -57849117 - AluSq SINE Alu -18 295 34 289 143 0 0 chr17 31655687 31655736 -57848817 + Alu SINE Alu 252 300 -1 2254 97 3 7 chr17 31655802 31656100 -57848453 - AluSp SINE Alu -15 298 2 2246 97 0 10 chr17 31656150 31656449 -57848104 - AluSx SINE Alu -16 296 1 2086 136 0 0 chr17 31656533 31656846 -57847707 - AluSx SINE Alu 0 313 1 453 282 26 67 chr17 31656912 31657052 -57847501 + MIR SINE MIR 75 206 -56 1190 43 25 25 chr17 31657052 31657214 -57847339 + L1PA4 LINE L1 5994 6155 0 453 282 26 67 chr17 31657214 31657268 -57847285 + MIR SINE MIR 206 261 -1 241 299 197 0 chr17 31657439 31657556 -57846997 + L2 LINE L2 3171 3310 -3 458 242 83 15 chr17 31657669 31657801 -57846752 - MLT1H LTR MaLR 0 549 409 207 302 0 0 chr17 31657923 31657976 -57846577 + CT-rich Low_complexity Low_complexity 1 53 0 272 259 94 80 chr17 31657991 31658209 -57846344 - MLT1H LTR MaLR -312 243 21 284 264 239 5 chr17 31658320 31658517 -57846036 + MIR SINE MIR 7 249 -13 2453 81 0 0 chr17 31658684 31658992 -57845561 - AluY SINE Alu -3 308 1 2216 121 0 7 chr17 31658992 31659299 -57845254 - AluSg SINE Alu -5 305 1 2007 148 3 19 chr17 31659331 31659648 -57844905 - AluSx SINE Alu 0 312 1 1664 181 33 7 chr17 31659703 31660006 -57844547 - AluJb SINE Alu -1 311 1 2100 114 13 29 chr17 31660229 31660544 -57844009 - AluSg SINE Alu 0 310 1 1982 158 0 0 chr17 31660870 31661161 -57843392 + AluJo SINE Alu 1 291 -21 2246 70 21 7 chr17 31661928 31662214 -57842339 + AluSg SINE Alu 1 290 -20 2488 91 0 0 chr17 31662233 31662542 -57842011 + AluSq SINE Alu 1 309 -4 302 153 17 0 chr17 31662584 31662643 -57841910 - MER5A DNA MER1_type -83 106 47 1954 152 36 0 chr17 31662998 31663300 -57841253 + AluSq SINE Alu 1 313 0 512 165 104 17 chr17 31663739 31663854 -57840699 - FLAM_C SINE Alu -8 125 1 1576 164 85 14 chr17 31663885 31664166 -57840387 + AluJo SINE Alu 1 301 -11 225 362 17 0 chr17 31664349 31664465 -57840088 + MER5A DNA MER1_type 72 189 0 201 39 0 0 chr17 31664747 31664773 -57839780 + (TTTG)n Simple_repeat Simple_repeat 4 29 0 2036 164 0 0 chr17 31664781 31665079 -57839474 - AluJb SINE Alu -14 298 1 2234 110 3 7 chr17 31665088 31665387 -57839166 - AluSg SINE Alu -12 298 1 422 274 14 85 chr17 31665508 31665622 -57838931 - MIR SINE MIR -1 261 169 2163 121 3 0 chr17 31665622 31665919 -57838634 - AluSx SINE Alu -14 298 1 422 274 14 85 chr17 31665919 31666027 -57838526 - MIR SINE MIR -93 169 55 2686 146 65 0 chr17 31666100 31666579 -57837974 + L1MA9 LINE L1 5759 6268 -44 2054 136 47 36 chr17 31666948 31667308 -57837245 - THE1B LTR MaLR 0 364 1 852 101 0 8 chr17 31667513 31667632 -57836921 - L1MA2 LINE L1 -37 6267 6150 1921 133 7 11 chr17 31667644 31667929 -57836624 - AluJb SINE Alu -20 292 9 1859 153 28 0 chr17 31668097 31668384 -57836169 + AluJb SINE Alu 1 295 -17 2368 80 3 3 chr17 31668400 31668700 -57835853 + AluSc SINE Alu 1 300 -9 192 303 161 64 chr17 31668708 31668926 -57835627 - L2 LINE L2 -92 3180 2942 195 366 30 23 chr17 31668961 31669092 -57835461 - L2 LINE L2 -568 2746 2615 2073 131 0 0 chr17 31669102 31669385 -57835168 + AluSx SINE Alu 14 296 -16 909 114 0 0 chr17 31669395 31669518 -57835035 + FLAM_C SINE Alu 3 125 -8 1227 141 117 82 chr17 31669599 31669747 -57834806 + AluJo SINE Alu 1 142 -170 2412 87 0 0 chr17 31669747 31670046 -57834507 + AluY SINE Alu 2 300 -11 1227 141 117 82 chr17 31670046 31670188 -57834365 + AluJo SINE Alu 142 301 -11 328 318 32 32 chr17 31670441 31670661 -57833892 - L2 LINE L2 -1022 2292 2073 2108 87 90 0 chr17 31671118 31671395 -57833158 + AluSq SINE Alu 1 302 -11 1000 178 6 0 chr17 31671400 31671557 -57832996 + FRAM SINE Alu 1 158 -18 32 35 0 18 chr17 31671615 31671641 -57832912 + AT_rich Low_complexity Low_complexity 1 26 -30 2120 114 0 3 chr17 31671641 31671931 -57832622 - AluSg SINE Alu -21 289 1 32 35 0 18 chr17 31671931 31671961 -57832592 + AT_rich Low_complexity Low_complexity 26 56 0 2060 134 0 0 chr17 31672059 31672366 -57832187 - AluSx SINE Alu 0 307 1 2227 91 0 24 chr17 31672528 31672825 -57831728 - AluSg SINE Alu -20 290 1 1341 159 0 23 chr17 31672927 31673147 -57831406 + AluJo SINE Alu 85 299 -13 1906 141 37 3 chr17 31673732 31674031 -57830522 + AluSx SINE Alu 1 309 -3 1213 102 0 6 chr17 31674031 31674197 -57830356 + AluSg/x SINE Alu 134 298 -14 2027 111 3 63 chr17 31674936 31675269 -57829284 - AluSq SINE Alu 0 313 1 616 189 15 61 chr17 31675269 31675401 -57829152 - AluJo/FLAM SINE Alu -175 127 2 2288 91 3 50 chr17 31675406 31675724 -57828829 - AluSp SINE Alu -10 303 1 473 291 55 65 chr17 31675849 31676107 -57828446 - L1ME LINE L1 -464 5706 5452 1792 170 17 3 chr17 31676107 31676407 -57828146 - AluJo SINE Alu -8 304 1 473 291 55 65 chr17 31676407 31676550 -57828003 - L1ME LINE L1 -718 5452 5309 1665 177 21 3 chr17 31676791 31677079 -57827474 + AluJb SINE Alu 3 295 -17 1700 119 78 4 chr17 31677779 31678048 -57826505 - AluJo SINE Alu -23 289 1 252 316 118 31 chr17 31678520 31678699 -57825854 + MIR SINE MIR 4 212 -50 2161 104 3 7 chr17 31678775 31679062 -57825491 + AluSp SINE Alu 1 286 -27 2442 68 3 0 chr17 31679107 31679401 -57825152 + AluY SINE Alu 1 295 -16 2197 116 0 13 chr17 31679416 31679552 -57825001 + AluSx SINE Alu 1 137 -175 1868 133 42 7 chr17 31679552 31679837 -57824716 + AluSc SINE Alu 1 295 -14 2197 116 0 13 chr17 31679837 31680002 -57824551 + AluSx SINE Alu 137 298 -14 2286 94 0 7 chr17 31680007 31680316 -57824237 + AluSc SINE Alu 1 307 -2 994 243 47 25 chr17 31681239 31681474 -57823079 - MIR SINE MIR 0 262 23 790 97 9 18 chr17 31682219 31682332 -57822221 - AluSq/x SINE Alu -199 113 2 965 83 8 8 chr17 31682916 31683048 -57821505 + AluSq/x SINE Alu 1 132 -180 2324 83 3 0 chr17 31683051 31683340 -57821213 + AluSq SINE Alu 1 290 -23 698 228 27 124 chr17 31683358 31683514 -57821039 + MIR SINE MIR 29 152 -110 2252 105 0 0 chr17 31683514 31683808 -57820745 + AluSg1 SINE Alu 1 294 -15 698 228 27 124 chr17 31683808 31683910 -57820643 + MIR SINE MIR 152 262 0 1417 179 46 36 chr17 31684242 31684544 -57820009 - AluJo SINE Alu 0 312 8 2215 80 52 3 chr17 31684713 31685002 -57819551 + AluSg SINE Alu 1 303 -7 2061 114 31 7 chr17 31685040 31685329 -57819224 + AluSc SINE Alu 1 296 -13 2246 107 0 0 chr17 31686454 31686745 -57817808 - AluSq SINE Alu -14 299 9 803 145 0 30 chr17 31687576 31687707 -57816846 - FLAM_C SINE Alu -16 127 1 2038 148 0 0 chr17 31687979 31688269 -57816284 - AluSx SINE Alu -22 290 1 2259 117 0 13 chr17 31688339 31688655 -57815898 + AluSq SINE Alu 1 312 -1 2224 126 0 0 chr17 31688809 31689118 -57815435 + AluSx SINE Alu 1 309 -3 645 213 0 57 chr17 31689122 31689263 -57815290 + FLAM_A SINE Alu 1 133 0 555 227 23 16 chr17 31689597 31689725 -57814828 - MER77 LTR ERV1 0 605 477 1159 161 43 39 chr17 31689729 31689959 -57814594 + AluJo SINE Alu 1 231 -81 2241 84 3 3 chr17 31689998 31690285 -57814268 + AluY SINE Alu 1 287 -24 2383 98 0 0 chr17 31690673 31691015 -57813538 + AluSg SINE Alu 1 342 0 249 253 38 13 chr17 31691105 31691184 -57813369 - L1ME4a LINE L1 -52 6069 5989 189 0 0 0 chr17 31691195 31691216 -57813337 + (TA)n Simple_repeat Simple_repeat 2 22 0 304 302 119 45 chr17 31691282 31691461 -57813092 - L1ME4a LINE L1 -375 5746 5582 1823 157 3 13 chr17 31691461 31691761 -57812792 - AluSx SINE Alu -15 297 1 304 302 119 45 chr17 31691761 31692014 -57812539 - L1ME4a LINE L1 -539 5582 5285 715 179 232 21 chr17 31692816 31693006 -57811547 - MIR SINE MIR -3 259 30 2227 104 0 3 chr17 31693022 31693321 -57811232 + AluSg SINE Alu 1 298 -12 2094 120 3 10 chr17 31693912 31694213 -57810340 - AluSg SINE Alu -11 299 1 220 118 29 0 chr17 31694390 31694424 -57810129 + L2 LINE L2 3264 3298 -15 833 238 88 9 chr17 31694638 31694865 -57809688 - MIR SINE MIR 0 262 18 611 269 130 0 chr17 31695106 31695314 -57809239 - L1MC/D LINE L1 -2265 5543 5309 945 175 45 7 chr17 31695532 31695686 -57808867 - AluJo SINE Alu -6 296 137 2031 218 128 93 chr17 31695715 31695817 -57808736 + L1MC4 LINE L1 6761 6858 -1184 2376 91 3 0 chr17 31695817 31696125 -57808428 + AluSp SINE Alu 1 309 -4 2031 218 128 93 chr17 31696125 31696381 -57808172 + L1MC4 LINE L1 6858 7104 -938 793 197 16 0 chr17 31696381 31696508 -57808045 - AluJo SINE Alu -170 132 4 261 0 0 0 chr17 31696514 31696543 -57808010 + (TC)n Simple_repeat Simple_repeat 2 30 0 198 103 0 0 chr17 31696542 31696571 -57807982 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 2031 218 128 93 chr17 31696543 31697349 -57807204 + L1MC4 LINE L1 7108 7945 -97 945 70 0 0 chr17 31697449 31697564 -57806989 + AluSc SINE Alu 180 294 -15 838 169 0 0 chr17 31697576 31697700 -57806853 - FRAM SINE Alu -47 129 6 2190 110 7 7 chr17 31698295 31698604 -57805949 - AluSx SINE Alu -3 309 1 351 293 42 14 chr17 31699022 31699234 -57805319 - L2 LINE L2 -660 2654 2437 257 190 138 0 chr17 31699234 31699292 -57805261 - L2 LINE L2 -4 3309 3244 1728 156 7 4 chr17 31699322 31699597 -57804956 + AluJo SINE Alu 25 300 -12 208 156 16 78 chr17 31699599 31699663 -57804890 - L2 LINE L2 -62 3251 3192 375 210 174 14 chr17 31699682 31699820 -57804733 - L2 LINE L2 -286 3027 2868 2381 62 3 10 chr17 31700058 31700366 -57804187 + AluSg SINE Alu 1 306 -4 213 250 0 0 chr17 31700851 31700911 -57803642 + CT-rich Low_complexity Low_complexity 2 61 0 213 235 0 37 chr17 31701084 31701165 -57803388 + (CGG)n Simple_repeat Simple_repeat 1 78 0 206 236 10 35 chr17 31701770 31701842 -57802711 - MIR SINE MIR -38 170 97 855 161 0 0 chr17 31703031 31703161 -57801392 + FLAM_A SINE Alu 4 133 0 2312 76 3 13 chr17 31703268 31703570 -57800983 - AluSp SINE Alu -14 299 1 2185 127 10 0 chr17 31704480 31704780 -57799773 + AluSx SINE Alu 1 303 -9 5612 35 0 8 chr17 31704869 31705928 -57798625 - SVA Other Other -954 1386 5 849 80 36 0 chr17 31705932 31706044 -57798509 - AluY SINE Alu -19 292 177 2082 128 17 0 chr17 31706071 31706367 -57798186 - AluSq SINE Alu -12 301 1 2129 115 0 0 chr17 31706367 31706661 -57797892 - AluY SINE Alu -16 295 1 2272 94 7 3 chr17 31706666 31706964 -57797589 - AluSq SINE Alu -14 299 1 2144 124 3 10 chr17 31707134 31707448 -57797105 - AluSq SINE Alu -1 312 1 1624 139 24 98 chr17 31708059 31708469 -57796084 - MER58D DNA MER1_type -6 380 1 2324 97 10 0 chr17 31708522 31708820 -57795733 - AluSg SINE Alu -9 301 1 22 0 0 0 chr17 31708892 31708914 -57795639 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr17 31708942 31708964 -57795589 + AT_rich Low_complexity Low_complexity 1 22 0 2219 104 3 0 chr17 31708964 31709252 -57795301 - AluSp SINE Alu -24 289 1 367 224 0 0 chr17 31709508 31709575 -57794978 + AluJo SINE Alu 1 67 -235 1212 173 27 4 chr17 31709684 31709909 -57794644 + AluJo SINE Alu 72 301 -11 238 313 0 52 chr17 31709996 31710092 -57794461 - MARNA DNA Mariner -82 504 414 2134 119 0 3 chr17 31711078 31711399 -57793154 + AluSq SINE Alu 1 320 0 248 328 107 33 chr17 31711981 31712103 -57792450 - L2 LINE L2 -5 3267 3137 455 284 0 17 chr17 31712606 31712722 -57791831 - L3 LINE CR1 -20 1557 1444 827 145 167 0 chr17 31714354 31714492 -57790061 - AluSq SINE Alu -16 297 137 2030 133 17 0 chr17 31714493 31714795 -57789758 - AluSx SINE Alu -5 307 1 1470 101 223 8 chr17 31714797 31715059 -57789494 - AluSq SINE Alu 0 313 1 636 217 9 0 chr17 31715219 31715334 -57789219 + AluJb SINE Alu 2 117 -195 1850 104 48 4 chr17 31716605 31716873 -57787680 - AluSg SINE Alu -30 280 1 25 0 0 0 chr17 31717029 31717054 -57787499 + AT_rich Low_complexity Low_complexity 1 25 0 2127 134 0 0 chr17 31717140 31717431 -57787122 + AluSg SINE Alu 1 291 -19 2331 88 13 3 chr17 31717588 31717894 -57786659 + AluSc SINE Alu 1 309 0 1418 203 51 4 chr17 31717907 31718183 -57786370 + AluJo SINE Alu 1 289 -23 1223 195 54 64 chr17 31718195 31718493 -57786060 + AluJo SINE Alu 1 295 -17 735 209 0 59 chr17 31718691 31718844 -57785709 + FRAM SINE Alu 17 160 -16 28 0 0 0 chr17 31719040 31719068 -57785485 + AT_rich Low_complexity Low_complexity 1 28 0 1659 158 65 0 chr17 31719883 31720161 -57784392 + AluJb SINE Alu 1 296 -16 1889 84 28 4 chr17 31720191 31720440 -57784113 + AluY SINE Alu 2 256 -55 25 75 0 0 chr17 31721348 31721401 -57783152 + AT_rich Low_complexity Low_complexity 1 53 0 206 221 42 147 chr17 31721967 31722062 -57782491 - L2 LINE L2 -55 3217 3133 554 242 152 17 chr17 31722754 31722932 -57781621 - L2 LINE L2 0 3313 3112 2560 47 3 0 chr17 31923344 31923640 -57580913 - AluY SINE Alu -14 297 1 265 238 119 27 chr17 31923797 31923901 -57580652 + HAL1b LINE L1 910 1003 -345 2620 47 3 0 chr17 31923901 31924199 -57580354 + AluSp SINE Alu 1 299 -14 265 238 119 27 chr17 31924199 31924279 -57580274 + HAL1b LINE L1 1003 1111 -237 2289 73 17 0 chr17 31925737 31926024 -57578529 - AluSx SINE Alu -20 292 1 1826 134 34 14 chr17 31926237 31926529 -57578024 + AluJb SINE Alu 1 298 -14 1712 185 127 33 chr17 31926674 31926789 -57577764 + MLT1C LTR MaLR 1 104 -363 2483 65 3 3 chr17 31926789 31927099 -57577454 + AluY SINE Alu 1 310 -1 1712 185 127 33 chr17 31927099 31927410 -57577143 + MLT1C LTR MaLR 104 467 0 581 249 104 0 chr17 31927472 31927645 -57576908 + MIR SINE MIR 66 256 -6 1733 187 0 16 chr17 31928017 31928322 -57576231 + AluJb SINE Alu 1 300 -12 372 314 64 28 chr17 31928434 31928717 -57575836 - L2 LINE L2 -978 2336 2044 2397 92 3 0 chr17 31928722 31929027 -57575526 + AluSq SINE Alu 1 306 -7 706 235 36 0 chr17 31929067 31929233 -57575320 + L1ME3A LINE L1 5518 5689 -481 300 239 0 0 chr17 31929250 31929317 -57575236 + MER116 DNA Mariner 14 80 0 258 159 0 0 chr17 31929318 31929362 -57575191 + L1ME3A LINE L1 5688 5731 -439 881 204 159 29 chr17 31929387 31929480 -57575073 + L1ME3A LINE L1 5819 5899 -271 2018 114 10 23 chr17 31929480 31929779 -57574774 + AluSq SINE Alu 1 295 -18 881 204 159 29 chr17 31929779 31929993 -57574560 + L1ME3A LINE L1 5899 6166 -4 1641 170 3 66 chr17 31930015 31930157 -57574396 + AluJo SINE Alu 5 154 -158 2508 75 0 3 chr17 31930157 31930465 -57574088 + AluY SINE Alu 1 307 -4 1641 170 3 66 chr17 31930465 31930539 -57574014 + AluJo SINE Alu 154 197 -115 2568 53 0 0 chr17 31930539 31930840 -57573713 - AluY SINE Alu -10 301 1 1641 170 3 66 chr17 31930840 31930940 -57573613 + AluJo SINE Alu 197 302 -10 2143 145 3 0 chr17 31930949 31931260 -57573293 + AluSx SINE Alu 1 312 0 2300 88 0 7 chr17 31931818 31932113 -57572440 - AluSg SINE Alu -17 293 1 2346 114 0 0 chr17 31932167 31932474 -57572079 + AluSx SINE Alu 1 307 -5 828 173 0 0 chr17 31932600 31932727 -57571826 - AluJb SINE Alu -185 127 1 1291 131 14 102 chr17 31933074 31933192 -57571361 - L1MB5 LINE L1 -1 6173 6046 2276 104 10 0 chr17 31933192 31933490 -57571063 - AluSx SINE Alu -11 301 1 1291 131 14 102 chr17 31933490 31933654 -57570899 - L1MB5 LINE L1 -128 6046 5916 1969 150 11 0 chr17 31933863 31934149 -57570404 - AluSx SINE Alu -23 289 1 1157 241 79 48 chr17 31934321 31934715 -57569838 + L2 LINE L2 2906 3311 -2 466 235 163 6 chr17 31934967 31935133 -57569420 - L2 LINE L2 -1 3312 3121 1865 106 0 44 chr17 31935138 31935412 -57569141 - AluSx SINE Alu -2 310 49 2006 138 7 0 chr17 31935415 31935697 -57568856 + AluSx SINE Alu 16 299 -13 233 136 212 0 chr17 31935705 31935771 -57568782 + MER116 DNA Mariner 1 80 0 631 219 92 88 chr17 31935772 31936023 -57568530 + MIR SINE MIR 11 262 0 2321 118 0 0 chr17 31936117 31936423 -57568130 - AluSx SINE Alu -6 306 1 1338 178 0 0 chr17 31936864 31937077 -57567476 - AluJb SINE Alu -15 297 85 256 133 0 0 chr17 31937083 31937128 -57567425 + L1MB4 LINE L1 6029 6073 -107 511 179 72 0 chr17 31937137 31937299 -57567254 + L1MA9 LINE L1 6021 6290 -22 360 107 23 199 chr17 31937312 31937401 -57567152 + L1MB4 LINE L1 6067 6127 -53 1668 181 0 27 chr17 31937401 31937699 -57566854 + AluJo SINE Alu 5 294 -18 360 107 23 199 chr17 31937699 31937740 -57566813 + L1MB4 LINE L1 6127 6174 -6 261 57 0 0 chr17 31937757 31937792 -57566761 + (T)n Simple_repeat Simple_repeat 1 35 0 381 268 89 30 chr17 31937886 31938103 -57566450 + MIR SINE MIR 28 262 0 369 162 0 0 chr17 31938123 31938191 -57566362 + A-rich Low_complexity Low_complexity 1 68 0 2641 55 0 6 chr17 31938392 31938704 -57565849 - AluY SINE Alu -1 310 1 384 300 22 56 chr17 31939330 31939510 -57565043 - MIR SINE MIR -85 177 4 188 225 28 28 chr17 31940163 31940234 -57564319 - L2 LINE L2 -181 3091 3021 496 295 10 50 chr17 31940279 31940479 -57564074 - MIR SINE MIR -51 211 20 270 205 26 26 chr17 31941797 31941875 -57562678 - MIR SINE MIR -118 144 67 2203 101 3 23 chr17 31941923 31942229 -57562324 - AluSx SINE Alu -12 300 1 265 208 0 65 chr17 31942233 31942310 -57562243 + MIR SINE MIR 66 137 -125 2378 90 3 13 chr17 31942352 31942662 -57561891 - AluSq SINE Alu -6 307 1 1956 154 7 0 chr17 31942752 31943044 -57561509 + AluJb SINE Alu 4 297 -15 334 138 0 250 chr17 31943286 31943446 -57561107 - L2 LINE L2 -17 3255 3136 2358 93 3 37 chr17 31943518 31943841 -57560712 - AluSq SINE Alu 0 313 2 2355 82 0 16 chr17 31943842 31944145 -57560408 - AluSx SINE Alu -10 302 5 396 69 0 42 chr17 31944163 31944235 -57560318 + (TTC)n Simple_repeat Simple_repeat 2 70 0 1247 135 0 35 chr17 31944238 31944421 -57560132 - AluSg/x SINE Alu 0 312 135 1648 134 112 7 chr17 31944421 31944690 -57559863 - AluSx SINE Alu -15 297 1 1247 135 0 35 chr17 31944690 31944706 -57559847 - AluSg/x SINE Alu -177 135 120 188 266 31 31 chr17 31944717 31944781 -57559772 - MIR SINE MIR -168 94 31 669 221 43 0 chr17 31945093 31945233 -57559320 + MIR SINE MIR 9 154 -108 323 222 148 62 chr17 31945722 31945884 -57558669 + MIR3 SINE MIR 18 193 -15 2347 84 3 10 chr17 31945990 31946301 -57558252 + AluY SINE Alu 1 309 -2 1521 187 30 40 chr17 31946396 31946696 -57557857 + AluJo SINE Alu 1 297 -15 1133 127 18 0 chr17 31946706 31946872 -57557681 + AluSg/x SINE Alu 137 305 -7 2140 116 25 0 chr17 31946872 31947157 -57557396 + AluSx SINE Alu 1 292 -20 445 280 53 8 chr17 31947162 31947294 -57557259 - MIR SINE MIR -7 255 118 428 341 133 0 chr17 31947517 31947690 -57556863 - MER91A DNA MER1_type 0 196 1 450 373 18 14 chr17 31947736 31947953 -57556600 + MIR SINE MIR 13 230 -32 1927 146 0 70 chr17 31948345 31948675 -57555878 - AluJb SINE Alu -5 307 1 556 219 91 106 chr17 31948676 31948704 -57555849 - MLT1K LTR MaLR -11 577 550 2194 120 0 0 chr17 31948704 31949030 -57555523 - AluSx SINE Alu 0 326 1 556 219 91 106 chr17 31949030 31949397 -57555156 - MLT1K LTR MaLR -38 550 187 476 306 124 26 chr17 31949527 31949720 -57554833 - MIR SINE MIR -17 245 34 1156 174 13 65 chr17 31949899 31950129 -57554424 + MER20 DNA MER1_type 1 218 -1 1907 122 3 31 chr17 31950221 31950508 -57554045 + AluJo SINE Alu 25 303 -9 2140 118 0 65 chr17 31950889 31951212 -57553341 - AluJb SINE Alu -10 302 1 2240 106 33 0 chr17 31951224 31951525 -57553028 - AluSq SINE Alu -1 312 2 314 305 153 0 chr17 31951574 31951692 -57552861 - MER91A DNA MER1_type -36 160 25 1922 170 0 0 chr17 31951834 31952146 -57552407 - AluSx SINE Alu 0 312 1 2309 75 0 0 chr17 31952178 31952456 -57552097 - AluSg SINE Alu -32 278 1 1132 224 47 83 chr17 31953208 31953407 -57551146 - L2 LINE L2 0 3313 3108 1923 151 0 66 chr17 31953407 31953739 -57550814 + AluJb SINE Alu 1 310 -2 2424 93 0 3 chr17 31953745 31954046 -57550507 + AluSp SINE Alu 3 302 -11 1132 224 47 83 chr17 31954046 31954246 -57550307 - L2 LINE L2 -210 3103 2922 258 360 143 6 chr17 31954254 31954415 -57550138 - MER91A DNA MER1_type -13 183 1 * 407 255 137 25 chr17 31954415 31954556 -57549997 - L2 LINE L2 -383 2931 2773 973 198 72 13 chr17 31954556 31954793 -57549760 - L1MB8 LINE L1 0 6178 5928 1577 216 3 28 chr17 31954801 31955121 -57549432 - AluJo SINE Alu 0 312 1 1001 123 0 6 chr17 31955123 31955294 -57549259 - L1M4 LINE L1 -696 5488 5319 804 70 0 0 chr17 31955294 31955394 -57549159 + AluY SINE Alu 1 100 -211 547 143 9 0 chr17 31955394 31955506 -57549047 - L1M4 LINE L1 -812 5334 5222 1731 211 93 96 chr17 31955511 31955603 -57548950 - L2 LINE L2 -534 2780 2689 2217 96 7 0 chr17 31955603 31955883 -57548670 - AluSg1 SINE Alu -27 282 1 2248 128 0 0 chr17 31955885 31956181 -57548372 - AluSx SINE Alu -16 296 1 1731 211 93 96 chr17 31956181 31956733 -57547820 - L2 LINE L2 -626 2688 2135 773 231 143 26 chr17 31956733 31957215 -57547338 - MLT1H1 LTR MaLR 0 555 1 342 304 11 0 chr17 31957216 31957308 -57547245 - L2 LINE L2 -1176 2138 2046 557 183 21 5 chr17 31957391 31957640 -57546913 + L1MA4A LINE L1 5963 6283 -20 187 167 0 28 chr17 31957938 31957974 -57546579 + L3 LINE CR1 1387 1421 -156 8584 104 5 18 chr17 31958130 31958149 -57546404 - HSMAR2 DNA Mariner -7 1295 1277 2355 90 0 0 chr17 31958149 31958449 -57546104 + AluY SINE Alu 1 300 -11 8584 104 5 18 chr17 31958449 31958606 -57545947 - HSMAR2 DNA Mariner -25 1277 1119 1903 177 0 13 chr17 31958606 31958922 -57545631 - AluJb SINE Alu 0 312 1 8584 104 5 18 chr17 31958922 31958969 -57545584 - HSMAR2 DNA Mariner -183 1119 1073 2363 92 0 0 chr17 31958969 31959264 -57545289 - AluSx SINE Alu -17 295 1 8584 104 5 18 chr17 31959264 31960350 -57544203 - HSMAR2 DNA Mariner -229 1073 1 858 201 42 57 chr17 31960358 31960571 -57543982 + L1ME1 LINE L1 5902 6112 -54 2294 99 0 0 chr17 31960571 31960863 -57543690 - AluSc SINE Alu -17 292 1 858 201 42 57 chr17 31960863 31960913 -57543640 + L1ME1 LINE L1 6112 6161 -5 662 291 48 82 chr17 31960921 31961334 -57543219 + L1MC/D LINE L1 5414 5812 -1996 3885 105 30 55 chr17 31961348 31961743 -57542810 + L1PA15 LINE L1 5275 5678 -487 2412 99 3 0 chr17 31961743 31962055 -57542498 + AluSp SINE Alu 1 313 0 3885 105 30 55 chr17 31962055 31962226 -57542327 + L1PA15 LINE L1 5678 5852 -313 2104 131 0 0 chr17 31962226 31962550 -57542003 + AluSg SINE Alu 1 324 0 2298 86 30 3 chr17 31962560 31962863 -57541690 + AluSq SINE Alu 1 311 -2 3885 105 30 55 chr17 31962863 31963006 -57541547 + L1PA15 LINE L1 5861 5974 -191 1097 121 0 7 chr17 31963006 31963155 -57541398 + AluSq/x SINE Alu 1 148 -165 2006 113 0 0 chr17 31963155 31963411 -57541142 - AluSq SINE Alu -57 256 1 389 290 55 44 chr17 31964066 31964121 -57540432 + MER5A DNA MER1_type 4 57 -132 1933 145 3 29 chr17 31964121 31964454 -57540099 + AluJb SINE Alu 1 312 0 389 290 55 44 chr17 31964454 31964523 -57540030 + MER5A DNA MER1_type 57 133 -56 2516 62 0 7 chr17 31964523 31964830 -57539723 + AluY SINE Alu 1 305 -6 389 290 55 44 chr17 31964830 31964887 -57539666 + MER5A DNA MER1_type 133 188 -1 2025 113 57 7 chr17 31964888 31965170 -57539383 - AluSx SINE Alu -16 296 1 214 175 25 0 chr17 31965410 31965450 -57539103 - MIR SINE MIR -138 124 84 2341 100 3 0 chr17 31966014 31966304 -57538249 - AluSx SINE Alu -21 291 1 2019 87 54 37 chr17 31966948 31967246 -57537307 + AluY SINE Alu 1 303 -8 566 224 168 12 chr17 31967503 31967664 -57536889 + MER5A DNA MER1_type 4 189 0 2634 58 0 3 chr17 31968119 31968431 -57536122 + AluY SINE Alu 1 311 0 520 280 25 6 chr17 31969016 31969173 -57535380 + MIR3 SINE MIR 37 196 -12 265 203 18 3 chr17 31969823 31969889 -57534664 - MIR SINE MIR -71 137 84 237 356 0 0 chr17 31969884 31969957 -57534596 + MIR SINE MIR 150 222 -40 * 952 131 0 7 chr17 31970151 31970288 -57534265 - FLAM_C SINE Alu -7 136 1 2611 61 0 0 chr17 31970297 31970607 -57533946 - AluY SINE Alu -1 310 1 516 340 43 5 chr17 31970824 31971012 -57533541 - MIR3 SINE MIR -12 196 2 2204 129 0 0 chr17 31971015 31971328 -57533225 - AluSx SINE Alu 0 312 1 481 274 63 63 chr17 31971426 31971649 -57532904 + MIR SINE MIR 7 229 -33 1514 86 43 56 chr17 31972107 31972187 -57532366 - MER30 DNA MER1_type 0 230 150 2402 93 0 10 chr17 31972187 31972489 -57532064 - AluSx SINE Alu -13 299 1 1514 86 43 56 chr17 31972489 31972641 -57531912 - MER30 DNA MER1_type -80 150 1 811 289 28 32 chr17 31973509 31973764 -57530789 + MIR SINE MIR 9 262 0 * 1129 167 0 0 chr17 31973763 31973931 -57530622 - AluJo/FRAM SINE Alu -13 299 132 1634 147 3 107 chr17 31973766 31973948 -57530605 - AluJo SINE Alu -6 296 161 1704 161 0 27 chr17 31973948 31974078 -57530475 + AluJb SINE Alu 1 133 -179 2187 112 20 3 chr17 31974078 31974383 -57530170 + AluSg SINE Alu 1 310 0 1704 161 0 27 chr17 31974383 31974551 -57530002 + AluJb SINE Alu 133 291 -21 1634 147 3 107 chr17 31974551 31974694 -57529859 - AluJo SINE Alu -141 161 5 2023 127 0 16 chr17 31976067 31976383 -57528170 - AluJb SINE Alu -1 311 1 498 198 36 72 chr17 31976824 31976991 -57527562 + L1MC4 LINE L1 7427 7587 -455 451 147 0 0 chr17 31977012 31977080 -57527473 + AluS SINE Alu 231 298 -13 1592 176 21 0 chr17 31977264 31977554 -57526999 + AluJb SINE Alu 1 296 -16 262 305 49 0 chr17 31977789 31977871 -57526682 - L2 LINE L2 -46 3267 3182 375 278 104 0 chr17 31978099 31978214 -57526339 - L2 LINE L2 -220 3052 2926 1708 150 37 7 chr17 31978220 31978514 -57526039 + 7SLRNA srpRNA srpRNA 10 312 -8 691 163 207 0 chr17 31978525 31978660 -57525893 + FRAM SINE Alu 4 166 0 325 93 53 107 chr17 31978689 31978764 -57525789 - MLT2B1 LTR ERVL 0 520 450 2433 78 0 0 chr17 31978764 31979073 -57525480 + AluSc SINE Alu 1 309 0 806 196 54 0 chr17 31979074 31979222 -57525331 + AluJo/FRAM SINE Alu 136 291 -21 842 212 64 40 chr17 31979243 31979353 -57525200 - L1ME1 LINE L1 -150 6016 5910 2278 64 0 0 chr17 31979353 31979691 -57524862 - AluY SINE Alu 0 338 1 842 212 64 40 chr17 31979691 31979829 -57524724 - L1ME1 LINE L1 -256 5910 5761 330 213 0 0 chr17 31979819 31979880 -57524673 + L1ME2 LINE L1 5784 5844 -320 * 1074 175 0 6 chr17 31979910 31980093 -57524460 + LTR43 LTR ERV1 1 182 -420 2049 122 0 3 chr17 31980121 31980416 -57524137 - AluSx SINE Alu -18 294 1 3092 98 10 46 chr17 31980416 31980789 -57523764 + LTR43 LTR ERV1 150 535 -67 2010 125 0 3 chr17 31980789 31981084 -57523469 - AluSc SINE Alu -15 294 1 3092 98 10 46 chr17 31981084 31981122 -57523431 + LTR43 LTR ERV1 535 547 -55 2201 85 3 0 chr17 31981122 31981416 -57523137 - AluY SINE Alu -16 295 1 3092 98 10 46 chr17 31981416 31981471 -57523082 + LTR43 LTR ERV1 547 602 0 1249 179 60 86 chr17 31981477 31981752 -57522801 - L1ME1 LINE L1 -629 5613 5332 939 208 12 0 chr17 31981752 31981925 -57522628 - FAM SINE Alu 0 175 1 1249 179 60 86 chr17 31981925 31981953 -57522600 - L1ME1 LINE L1 -910 5332 5305 2177 66 35 7 chr17 31981953 31982239 -57522314 + AluY SINE Alu 1 294 -17 1249 179 60 86 chr17 31982239 31982355 -57522198 - L1ME1 LINE L1 -937 5305 5191 247 257 132 124 chr17 31982361 31982486 -57522067 + Charlie2 DNA MER1_type 319 442 -2420 711 158 24 31 chr17 31982486 31982613 -57521940 + FLAM_C SINE Alu 1 126 -7 247 257 132 124 chr17 31982613 31982744 -57521809 + Charlie2 DNA MER1_type 442 577 -2285 2342 84 0 6 chr17 31982758 31983069 -57521484 + AluSx SINE Alu 1 309 -3 954 165 0 0 chr17 31983110 31983274 -57521279 + AluSg/x SINE Alu 135 298 -12 2084 121 3 0 chr17 31983331 31983636 -57520917 - AluSx SINE Alu -6 306 1 1600 173 48 0 chr17 31983721 31984016 -57520537 + AluJb SINE Alu 1 309 -3 237 132 0 0 chr17 31984023 31984061 -57520492 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 957 183 25 5 chr17 31984061 31984257 -57520296 + Charlie2a DNA MER1_type 1646 1845 -1017 2266 173 82 100 chr17 31984257 31984926 -57519627 - LTR8A LTR ERV1 0 727 71 324 225 62 78 chr17 31984971 31985100 -57519453 - L1 LINE L1 -2947 3199 3073 1473 197 126 78 chr17 31985106 31985150 -57519403 + Charlie2a DNA MER1_type 1861 1901 -961 2192 62 7 36 chr17 31985150 31985457 -57519096 - AluY SINE Alu -13 298 1 1473 197 126 78 chr17 31985457 31985697 -57518856 + Charlie2a DNA MER1_type 1901 2128 -734 1787 138 28 3 chr17 31985697 31985980 -57518573 - AluSx SINE Alu -20 292 3 1473 197 126 78 chr17 31985980 31986353 -57518200 + Charlie2a DNA MER1_type 2128 2481 -381 1669 113 132 0 chr17 31986353 31986618 -57517935 - AluSg SINE Alu 0 300 1 1473 197 126 78 chr17 31986618 31986642 -57517911 + Charlie2a DNA MER1_type 2481 2502 -360 1944 82 6 75 chr17 31986642 31986960 -57517593 + AluSx SINE Alu 1 296 -16 1473 197 126 78 chr17 31986960 31986995 -57517558 + Charlie2a DNA MER1_type 2502 2615 -247 2355 70 0 10 chr17 31987028 31987341 -57517212 - AluY SINE Alu -1 310 1 235 237 17 0 chr17 31987367 31987426 -57517127 + Charlie2a DNA MER1_type 2803 2862 0 204 293 98 0 chr17 31987434 31987516 -57517037 - L2 LINE L2 -1525 1789 1700 1620 136 3 118 chr17 31987517 31987856 -57516697 - AluJb SINE Alu -2 300 1 588 252 56 22 chr17 31987996 31988338 -57516215 - MLT1I LTR MaLR -3 406 14 1739 93 28 0 chr17 31988406 31988581 -57515972 - AluSx SINE Alu 0 312 126 180 0 0 0 chr17 31988581 31988601 -57515952 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 1739 93 28 0 chr17 31988601 31988673 -57515880 - AluSx SINE Alu -186 126 58 198 103 0 0 chr17 31988830 31988859 -57515694 + (T)n Simple_repeat Simple_repeat 1 29 0 508 197 55 24 chr17 31989099 31989226 -57515327 + MER5B DNA MER1_type 9 139 -39 220 344 0 11 chr17 31989577 31989667 -57514886 + G-rich Low_complexity Low_complexity 2 90 0 23 33 0 0 chr17 31990058 31990088 -57514465 + GC_rich Low_complexity Low_complexity 1 30 0 1986 142 22 65 chr17 31990394 31990438 -57514115 - L1MB4 LINE L1 -6 7593 7549 2051 101 0 26 chr17 31990438 31990745 -57513808 - AluSx SINE Alu -13 299 1 1986 142 22 65 chr17 31990745 31990756 -57513797 - L1MB4 LINE L1 -50 7549 7539 2154 61 0 55 chr17 31990756 31991066 -57513487 - AluY SINE Alu -18 293 1 1986 142 22 65 chr17 31991066 31991426 -57513127 - L1MB4 LINE L1 -60 7539 7195 2240 100 0 0 chr17 31991426 31991727 -57512826 - AluSc SINE Alu -8 301 1 3586 197 24 35 chr17 31991727 31992126 -57512427 - L1MB4 LINE L1 -734 6859 6457 1954 122 10 0 chr17 31992126 31992414 -57512139 - AluSq SINE Alu -17 296 6 3586 197 24 35 chr17 31992414 31992613 -57511940 - L1MB4 LINE L1 -1136 6457 6257 1343 147 159 8 chr17 31992613 31992865 -57511688 + AluJb SINE Alu 1 290 -12 3586 197 24 35 chr17 31992865 31993321 -57511232 - L1MB4 LINE L1 -1336 6257 5818 2105 101 7 0 chr17 31993321 31993631 -57510922 - AluSx SINE Alu 0 312 1 780 148 25 0 chr17 31993672 31993794 -57510759 + FLAM_C SINE Alu 13 137 -6 802 201 6 29 chr17 31993814 31993988 -57510565 + AluJb SINE Alu 120 289 -23 2237 87 3 0 chr17 31994658 31994957 -57509596 - AluSg SINE Alu -10 300 1 7288 131 94 18 chr17 31994958 31996021 -57508532 - L1MB4 LINE L1 -3372 4193 3212 1948 111 0 0 chr17 31996021 31996307 -57508246 - AluSx SINE Alu 0 306 21 1708 74 0 0 chr17 31996307 31996522 -57508031 - AluSq SINE Alu -97 216 1 7288 131 94 18 chr17 31996522 31997259 -57507294 - L1MB4 LINE L1 -4352 3213 2258 6240 60 18 26 chr17 31997263 31998146 -57506407 - SVA Other Other -3 1383 508 2376 70 0 0 chr17 31998320 31998621 -57505932 - AluY SINE Alu -9 302 2 2409 70 0 0 chr17 31999471 31999772 -57504781 + AluY SINE Alu 1 301 -10 292 203 165 13 chr17 31999938 32000017 -57504536 + MIR SINE MIR 85 175 -87 183 143 0 125 chr17 31999979 32000035 -57504518 - L2 LINE L2 -1084 2230 2182 * 1698 166 3 28 chr17 32000366 32000686 -57503867 + AluJb SINE Alu 1 312 0 343 167 0 17 chr17 32000954 32001014 -57503539 - AluSq SINE Alu -114 189 131 1298 245 90 79 chr17 32001024 32001689 -57502864 + L1MC4a LINE L1 5446 6121 -1687 1832 96 44 4 chr17 32001689 32001984 -57502569 - AluSx SINE Alu 0 306 1 1298 245 90 79 chr17 32001984 32001998 -57502555 + L1MC4a LINE L1 6121 6133 -1675 1974 112 56 0 chr17 32002216 32002501 -57502052 - AluSq SINE Alu -6 307 7 467 176 88 10 chr17 32002857 32002959 -57501594 - FRAM SINE Alu -22 154 45 2199 119 0 0 chr17 32003084 32003396 -57501157 + AluSx SINE Alu 1 312 0 315 301 31 0 chr17 32003396 32003543 -57501010 + MIR SINE MIR 38 188 -74 201 295 23 93 chr17 32003730 32003859 -57500694 - MIR SINE MIR -67 195 76 708 162 24 72 chr17 32004026 32004169 -57500384 + L1MB7 LINE L1 6017 6156 -28 1694 157 25 4 chr17 32004169 32004478 -57500075 + AluSx SINE Alu 1 315 0 708 162 24 72 chr17 32004478 32004498 -57500055 + L1MB7 LINE L1 6156 6175 -9 449 249 50 39 chr17 32004627 32004808 -57499745 + L1ME3A LINE L1 5988 6170 0 2556 193 67 33 chr17 32004836 32005019 -57499534 + MLT1E LTR MaLR 1 176 -417 2146 87 7 17 chr17 32005019 32005319 -57499234 + AluSq SINE Alu 1 297 -16 2556 193 67 33 chr17 32005319 32005704 -57498849 + MLT1E LTR MaLR 176 588 -5 2033 180 49 26 chr17 32005715 32006252 -57498301 - MER77 LTR ERV1 -4 601 1 822 137 0 0 chr17 32006282 32006399 -57498154 + FLAM_C SINE Alu 2 118 -25 1745 143 7 27 chr17 32007537 32007838 -57496715 - AluSx SINE Alu -17 295 1 918 236 107 18 chr17 32008065 32008391 -57496162 - MER96B DNA MER1_type? -52 365 11 244 253 66 33 chr17 32008694 32008785 -57495768 + L2 LINE L2 1696 1789 -1525 239 291 64 9 chr17 32008834 32008944 -57495609 - L1MC5 LINE L1 -535 7426 7311 * 273 304 10 10 chr17 32008928 32009030 -57495523 - L1MC4 LINE L1 -547 7495 7394 2154 75 4 0 chr17 32009183 32009496 -57495057 - AluSc SINE Alu 0 314 1 707 98 4 225 chr17 32009634 32009722 -57494831 - L1MD3 LINE L1 -2 7993 7887 1527 159 4 4 chr17 32009722 32009979 -57494574 - AluJo SINE Alu -55 257 1 707 98 4 225 chr17 32009979 32010011 -57494542 - L1MD3 LINE L1 -108 7887 7850 2030 136 10 0 chr17 32010011 32010320 -57494233 - AluSx SINE Alu 0 312 1 2111 132 3 0 chr17 32010320 32010631 -57493922 - AluSx SINE Alu 0 312 1 707 98 4 225 chr17 32010631 32010752 -57493801 - L1MD3 LINE L1 -143 7852 7804 1147 101 6 0 chr17 32010810 32010979 -57493574 - L1MB3 LINE L1 0 6183 6014 330 128 0 0 chr17 32011041 32011088 -57493465 + Alu SINE Alu 1 47 -255 180 111 0 0 chr17 32011212 32011239 -57493314 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 434 275 188 67 chr17 32011457 32011606 -57492947 - L1ME4a LINE L1 -133 5988 5858 324 0 0 0 chr17 32011606 32011642 -57492911 + (TA)n Simple_repeat Simple_repeat 2 37 0 1773 171 0 13 chr17 32011642 32011958 -57492595 - AluSp SINE Alu -1 312 1 434 275 188 67 chr17 32011958 32012153 -57492400 - L1ME4a LINE L1 -262 5859 5601 346 141 27 28 chr17 32012165 32012257 -57492296 + FAM SINE Alu 27 91 -84 294 299 45 73 chr17 32012933 32013110 -57491443 - MIR3 SINE MIR 0 208 37 2060 112 3 0 chr17 32013235 32013529 -57491024 - AluSc SINE Alu -14 295 1 262 217 72 36 chr17 32014380 32014463 -57490090 - MIR SINE MIR -4 258 173 744 289 22 30 chr17 32014491 32014723 -57489830 + MIR SINE MIR 33 262 0 378 256 176 16 chr17 32014737 32014862 -57489691 - MIR SINE MIR -105 157 13 2134 85 16 13 chr17 32015174 32015479 -57489074 + AluSg SINE Alu 1 306 -4 1140 81 0 0 chr17 32015745 32015894 -57488659 + AluSc SINE Alu 3 151 -158 306 314 29 0 chr17 32015997 32016099 -57488454 - LTR67 LTR ERVL -51 506 402 693 288 89 8 chr17 32016479 32016715 -57487838 - MIR SINE MIR 0 262 8 207 146 0 0 chr17 32017475 32017516 -57487037 + (A)n Simple_repeat Simple_repeat 1 41 0 193 29 59 0 chr17 32017764 32017798 -57486755 + (TA)n Simple_repeat Simple_repeat 1 36 0 1603 160 25 0 chr17 32017799 32018081 -57486472 - AluJo SINE Alu -23 289 1 262 313 83 10 chr17 32018321 32018417 -57486136 + MIR SINE MIR 48 150 -58 563 232 36 7 chr17 32018866 32019004 -57485549 - MIR SINE MIR -86 176 35 2185 110 3 0 chr17 32019381 32019689 -57484864 - AluSx SINE Alu -3 309 1 324 0 0 0 chr17 32019892 32019928 -57484625 + (T)n Simple_repeat Simple_repeat 1 36 0 322 51 0 0 chr17 32019928 32019967 -57484586 - MER57B LTR ERV1 -66 368 330 490 269 139 66 chr17 32020029 32020401 -57484152 + LTR16A1 LTR ERVL 74 452 -5 436 323 0 12 chr17 32020744 32020908 -57483645 + (CA)n Simple_repeat Simple_repeat 2 163 0 1917 145 0 0 chr17 32021302 32021620 -57482933 - AluSx SINE Alu 0 318 1 322 341 61 8 chr17 32022016 32022148 -57482405 - MIR SINE MIR -29 233 95 1837 117 4 4 chr17 32022250 32022523 -57482030 + AluSp SINE Alu 37 309 -4 811 266 42 21 chr17 32022701 32022942 -57481611 - MIR SINE MIR -1 261 16 255 294 37 37 chr17 32023320 32023456 -57481097 + LTR67 LTR ERVL 410 545 -12 1991 146 0 0 chr17 32023883 32024170 -57480383 + AluSx SINE Alu 24 310 -2 1441 146 48 54 chr17 32025021 32025315 -57479238 + AluJb SINE Alu 6 297 -15 2136 149 79 28 chr17 32025343 32025771 -57478782 - L1MB8 LINE L1 -6 6172 5723 922 181 7 0 chr17 32025882 32026037 -57478516 + AluSg/x SINE Alu 140 295 -17 2142 106 0 0 chr17 32026040 32026365 -57478188 + AluSg SINE Alu 1 325 0 524 132 0 0 chr17 32026857 32026933 -57477620 - MLT1A1 LTR MaLR 0 365 290 1638 174 17 11 chr17 32026933 32027220 -57477333 + AluJb SINE Alu 1 289 -23 398 143 13 0 chr17 32027220 32027297 -57477256 + GA-rich Low_complexity Low_complexity 1 78 0 258 136 0 0 chr17 32027291 32027335 -57477218 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 * 782 126 66 56 chr17 32027339 32027446 -57477107 - MLT1A1 LTR MaLR -55 341 237 2054 106 0 24 chr17 32027446 32027738 -57476815 - AluSx SINE Alu -5 307 23 782 126 66 56 chr17 32027738 32027873 -57476680 - MLT1A1 LTR MaLR -159 237 2 2114 117 10 3 chr17 32028244 32028544 -57476009 - AluSx SINE Alu -10 302 1 29 28 0 0 chr17 32028544 32028580 -57475973 + AT_rich Low_complexity Low_complexity 1 36 0 1993 107 3 21 chr17 32028580 32028870 -57475683 - AluY SINE Alu -26 285 1 867 112 17 28 chr17 32029465 32029643 -57474910 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 2293 69 0 50 chr17 32029901 32030221 -57474332 - AluY SINE Alu -7 304 1 1342 154 222 18 chr17 32030725 32031004 -57473549 - MER44D DNA MER2_type -3 606 1 300 200 0 0 chr17 32033860 32033915 -57470638 - MER5B DNA MER1_type -123 55 1 439 230 31 123 chr17 32034746 32035007 -57469546 + LTR67 LTR ERVL 3 239 -318 2277 106 0 0 chr17 32035014 32035315 -57469238 + AluSx SINE Alu 1 301 -11 438 20 0 0 chr17 32035435 32035486 -57469067 + (TC)n Simple_repeat Simple_repeat 2 52 0 337 171 0 0 chr17 32035502 32035569 -57468984 - L1MA9 LINE L1 -166 6125 6059 248 226 48 0 chr17 32035668 32035730 -57468823 + LTR67 LTR ERVL 493 557 0 440 292 7 14 chr17 32035814 32035958 -57468595 + MIR SINE MIR 10 152 -110 731 58 0 0 chr17 32035959 32036045 -57468508 - AluS SINE Alu -225 87 2 182 250 23 0 chr17 32036252 32036296 -57468257 - L2 LINE L2 -14 3299 3255 352 326 23 125 chr17 32036658 32036803 -57467750 - L2 LINE L2 -14 3258 3100 2134 119 0 10 chr17 32036803 32037098 -57467455 + AluSc SINE Alu 1 292 -17 352 326 23 125 chr17 32037098 32037345 -57467208 - L2 LINE L2 -172 3100 2906 955 303 52 26 chr17 32037486 32037872 -57466681 - MLT1J2 LTR MaLR 0 450 55 2360 69 0 30 chr17 32038663 32038968 -57465585 + AluY SINE Alu 1 296 -15 349 233 27 0 chr17 32039243 32039316 -57465237 - MIR SINE MIR -165 97 23 2102 71 0 99 chr17 32039484 32039807 -57464746 - AluSc SINE Alu -18 291 1 2282 171 63 8 chr17 32041099 32041549 -57463004 + MLT1D LTR MaLR 41 505 0 1856 159 3 3 chr17 32041798 32042088 -57462465 + AluSx SINE Alu 1 290 -22 225 119 0 0 chr17 32042610 32042652 -57461901 + (CA)n Simple_repeat Simple_repeat 2 43 0 2348 80 10 0 chr17 32042731 32043033 -57461520 - AluSq SINE Alu -8 305 1 1993 114 24 0 chr17 32043749 32044038 -57460515 - AluY SINE Alu -15 296 1 4093 113 7 42 chr17 32044333 32045283 -57459270 - L1PB4 LINE L1 0 6156 5254 1895 151 0 27 chr17 32045314 32045613 -57458940 - AluJb SINE Alu -21 291 1 29 28 0 0 chr17 32045613 32045649 -57458904 + AT_rich Low_complexity Low_complexity 1 36 0 2304 140 9 6 chr17 32046760 32047096 -57457457 - MER1B DNA MER1_type 0 337 1 1082 197 38 50 chr17 32047230 32047469 -57457084 + MIR SINE MIR 8 243 -19 191 35 0 35 chr17 32047511 32047540 -57457013 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 1475 236 89 114 chr17 32048543 32048767 -57455786 - HAL1 LINE L1 0 2507 2279 2221 124 0 0 chr17 32048767 32049066 -57455487 - AluSx SINE Alu -13 299 1 1475 236 89 114 chr17 32049066 32049143 -57455410 - HAL1 LINE L1 -228 2279 2202 1606 174 7 44 chr17 32049143 32049436 -57455117 - AluJo SINE Alu -30 282 1 1475 236 89 114 chr17 32049436 32050142 -57454411 - HAL1 LINE L1 -305 2202 1524 501 145 0 103 chr17 32050149 32050266 -57454287 - Charlie5 DNA MER1_type 0 2622 2518 675 168 9 0 chr17 32050267 32050374 -57454179 + FLAM_A SINE Alu 2 109 -33 522 181 51 134 chr17 32050434 32050688 -57453865 - MER33 DNA MER1_type -249 75 1 604 179 26 22 chr17 32050757 32050894 -57453659 - L1M4 LINE L1 -676 5475 5357 497 246 8 31 chr17 32051778 32051908 -57452645 - MLT1K LTR MaLR -15 573 447 2314 78 0 32 chr17 32052420 32052729 -57451824 - AluY SINE Alu -12 299 1 28 79 0 0 chr17 32052865 32052928 -57451625 + AT_rich Low_complexity Low_complexity 1 63 0 264 59 0 0 chr17 32053250 32053284 -57451269 + (TG)n Simple_repeat Simple_repeat 1 34 0 234 146 0 42 chr17 32053287 32053335 -57451218 + L1MC4 LINE L1 6658 6703 -1339 222 264 138 23 chr17 32054439 32054526 -57450027 - L2 LINE L2 -8 3305 3209 199 143 184 0 chr17 32054783 32054832 -57449721 - L2 LINE L2 -8 3305 3248 240 308 162 0 chr17 32054977 32055094 -57449459 - MIR SINE MIR -79 183 48 381 250 191 18 chr17 32055172 32055340 -57449213 - MIR SINE MIR 0 262 66 2276 105 3 10 chr17 32056236 32056550 -57448003 + AluSq SINE Alu 2 313 0 3398 107 97 16 chr17 32056756 32057243 -57447310 - MER1A DNA MER1_type 0 527 2 2200 114 3 0 chr17 32057497 32057787 -57446766 + AluSp SINE Alu 1 291 -22 180 111 0 0 chr17 32057860 32057887 -57446666 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 5463 81 33 11 chr17 32057940 32058733 -57445820 - SVA Other Other -520 866 57 297 0 0 0 chr17 32058733 32058766 -57445787 + (GGGAGA)n Simple_repeat Simple_repeat 5 37 0 5384 139 43 9 chr17 32058788 32060088 -57444465 - L1M1 LINE L1 -5272 2293 11 484 164 11 8 chr17 32060130 32060224 -57444329 - L1MB3 LINE L1 -47 6136 6049 2590 150 47 7 chr17 32060252 32060699 -57443854 - L1MB2 LINE L1 -110 6061 5597 710 115 10 0 chr17 32060733 32060837 -57443716 - AluSg/x SINE Alu -7 305 201 1841 102 0 0 chr17 32060940 32061185 -57443368 - AluSq SINE Alu -14 299 55 2163 112 7 0 chr17 32062829 32063123 -57441430 - AluSx SINE Alu -16 296 1 24 0 0 0 chr17 32063174 32063198 -57441355 + AT_rich Low_complexity Low_complexity 1 24 0 335 190 0 13 chr17 32063209 32063288 -57441265 + (TA)n Simple_repeat Simple_repeat 1 78 0 1084 130 57 0 chr17 32063288 32063465 -57441088 - AluSq SINE Alu -7 306 120 28 29 0 0 chr17 32063638 32063673 -57440880 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr17 32064087 32064108 -57440445 + AT_rich Low_complexity Low_complexity 1 21 0 530 230 61 70 chr17 32064369 32064505 -57440048 + MER2 DNA MER2_type 1 136 -209 1400 185 141 22 chr17 32064505 32064775 -57439778 - AluJo SINE Alu 0 302 1 530 230 61 70 chr17 32064775 32064851 -57439702 + MER2 DNA MER2_type 136 211 -134 2131 35 4 23 chr17 32065055 32065314 -57439239 + SVA Other Other 1133 1386 0 1036 172 91 10 chr17 32065352 32065561 -57438992 + AluJo SINE Alu 82 307 -5 750 265 53 71 chr17 32065580 32066029 -57438524 + L1M4 LINE L1 4177 4617 -1529 816 164 0 0 chr17 32066040 32066156 -57438397 - AluJb SINE Alu -25 287 172 2161 120 10 0 chr17 32066234 32066543 -57438010 - AluSx SINE Alu 0 312 1 715 85 0 21 chr17 32067084 32067178 -57437375 + AluS SINE Alu 2 93 -219 1655 115 58 0 chr17 32067183 32067426 -57437127 - AluSq SINE Alu -56 257 1 971 124 13 20 chr17 32067548 32067701 -57436852 - AluSx SINE Alu -159 153 2 185 300 0 33 chr17 32067794 32067854 -57436699 + MIR SINE MIR 93 150 -58 1124 208 33 0 chr17 32068291 32068503 -57436050 - MER20 DNA MER1_type 0 219 1 556 248 23 8 chr17 32069492 32069621 -57434932 + MER5A DNA MER1_type 37 167 -22 218 333 82 34 chr17 32069976 32070123 -57434430 + L2 LINE L2 3160 3313 0 2161 102 0 0 chr17 32070127 32070451 -57434102 + AluY SINE Alu 1 324 0 809 219 59 16 chr17 32071109 32071296 -57433257 - MER58C DNA MER1_type -10 205 11 277 297 0 68 chr17 32071474 32071592 -57432961 - MIR3 SINE MIR -3 205 96 705 208 0 0 chr17 32071851 32072079 -57432474 + (CA)n Simple_repeat Simple_repeat 1 228 0 276 30 0 0 chr17 32072344 32072377 -57432176 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 718 183 9 0 chr17 32072379 32072494 -57432059 - FLAM_C SINE Alu -17 116 1 265 242 121 81 chr17 32072494 32072643 -57431910 - L1ME3 LINE L1 -47 6115 5961 2055 145 0 0 chr17 32072674 32072971 -57431582 + AluSq SINE Alu 1 297 -16 1467 119 0 0 chr17 32072971 32073165 -57431388 - AluSq SINE Alu -114 199 6 407 289 213 57 chr17 32073316 32073879 -57430674 + L1MC4a LINE L1 5284 5934 -1874 1796 177 3 13 chr17 32074066 32074376 -57430177 + AluJb SINE Alu 1 307 -5 194 91 30 0 chr17 32075284 32075317 -57429236 + A-rich Low_complexity Low_complexity 5 38 0 882 222 102 0 chr17 32075681 32075906 -57428647 - MIR SINE MIR -2 260 13 1974 87 50 43 chr17 32075963 32076263 -57428290 + AluSp SINE Alu 1 302 -11 1318 142 5 0 chr17 32080597 32080801 -57423752 - AluJo SINE Alu -107 205 1 1213 181 9 22 chr17 32080806 32081033 -57423520 + MLT1F1 LTR MaLR 344 567 0 510 277 47 0 chr17 32081054 32081202 -57423351 - L3 LINE CR1 -187 1390 1236 348 302 131 48 chr17 32081208 32081499 -57423054 - L2 LINE L2 -5 3267 2953 497 346 87 11 chr17 32081534 32081889 -57422664 - L3 LINE CR1 -354 1223 842 500 318 109 14 chr17 32082532 32082743 -57421810 - L2 LINE L2 -1 3271 3041 476 261 19 50 chr17 32082771 32082932 -57421621 - MIR SINE MIR 0 262 107 1608 178 7 3 chr17 32082942 32083234 -57421319 + AluJb SINE Alu 5 297 -15 1841 143 7 0 chr17 32083236 32083523 -57421030 + AluSx SINE Alu 1 289 -23 198 0 0 0 chr17 32083530 32083552 -57421001 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 340 198 43 58 chr17 32083641 32083735 -57420818 + MER91B DNA MER1_type 1 91 -49 585 99 12 0 chr17 32083870 32083951 -57420602 - AluS SINE Alu -229 83 2 2683 167 16 58 chr17 32083951 32084845 -57419708 - L1M3 LINE L1 -575 5608 4758 1522 293 100 72 chr17 32085256 32086514 -57418039 + L2 LINE L2 1864 3172 -100 1947 100 50 0 chr17 32086514 32086793 -57417760 - AluSg SINE Alu -17 293 1 1522 293 100 72 chr17 32086793 32086898 -57417655 + L2 LINE L2 3172 3272 0 617 212 82 38 chr17 32086935 32087119 -57417434 + MIR SINE MIR 30 221 -41 285 262 184 64 chr17 32087148 32087289 -57417264 + MIR SINE MIR 94 251 -11 1967 133 0 10 chr17 32087530 32087830 -57416723 - AluSx SINE Alu -15 297 1 337 235 29 37 chr17 32087925 32088061 -57416492 - L1ME4a LINE L1 -4 6117 5983 2307 84 3 0 chr17 32088715 32089024 -57415529 - AluY SINE Alu -1 310 1 511 127 0 0 chr17 32089073 32089152 -57415401 - AluSx SINE Alu -5 304 226 327 122 0 8 chr17 32089153 32089203 -57415350 - AluSx SINE Alu -136 164 122 276 100 0 0 chr17 32089203 32089243 -57415310 + (T)n Simple_repeat Simple_repeat 1 40 0 1098 233 5 5 chr17 32090572 32090791 -57413762 + MIR SINE MIR 2 220 -42 861 170 0 0 chr17 32090958 32091105 -57413448 - AluSx SINE Alu -166 147 1 682 179 0 64 chr17 32091153 32091293 -57413260 + FLAM_C SINE Alu 3 133 0 768 123 0 0 chr17 32091296 32091410 -57413143 - L1MA5A LINE L1 -17 6280 6167 1786 104 12 0 chr17 32091511 32091761 -57412792 - AluSq SINE Alu -60 253 1 238 289 0 8 chr17 32091809 32091937 -57412616 - L1M4 LINE L1 -832 5314 5188 1981 127 3 7 chr17 32091982 32092281 -57412272 - AluSp SINE Alu -15 298 1 787 192 0 0 chr17 32092289 32092414 -57412139 - FLAM_C SINE Alu -17 126 2 235 105 0 197 chr17 32092419 32092495 -57412058 - Alu SINE Alu -2 300 240 1496 208 7 10 chr17 32092514 32092812 -57411741 - AluJo SINE Alu -3 299 3 329 250 30 140 chr17 32092812 32093048 -57411505 - L1M4 LINE L1 -949 5197 4988 2016 105 0 38 chr17 32093073 32093418 -57411135 - AluSx SINE Alu 0 312 1 632 186 8 24 chr17 32093423 32093547 -57411006 - FLAM_C SINE Alu -16 127 6 180 0 0 0 chr17 32093850 32093870 -57410683 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1684 142 39 3 chr17 32093870 32094152 -57410401 - AluJb SINE Alu -20 292 1 361 147 0 40 chr17 32094236 32094311 -57410242 - L1MB2 LINE L1 0 6171 6100 1855 133 0 23 chr17 32094312 32094614 -57409939 + AluSx SINE Alu 4 298 -14 715 173 0 24 chr17 32094614 32094741 -57409812 - FLAM_A SINE Alu -8 125 2 1318 161 22 0 chr17 32094741 32094964 -57409589 - L1MB2 LINE L1 -119 6052 5825 2033 99 14 17 chr17 32094969 32095137 -57409416 - AluSx SINE Alu -17 295 127 207 0 0 0 chr17 32095137 32095160 -57409393 + (TG)n Simple_repeat Simple_repeat 2 24 0 2033 99 14 17 chr17 32095160 32095285 -57409268 - AluSx SINE Alu -185 127 3 2153 108 3 0 chr17 32095299 32095596 -57408957 - AluSg SINE Alu -10 300 3 2716 171 21 58 chr17 32095698 32095780 -57408773 - L1MB2 LINE L1 -743 5403 5320 2159 92 0 0 chr17 32095780 32096083 -57408470 - AluSx SINE Alu 0 303 1 1784 147 7 3 chr17 32096093 32096378 -57408175 - AluSx SINE Alu -26 286 1 2716 171 21 58 chr17 32096378 32096900 -57407653 - L1MB2 LINE L1 -835 5311 4810 1971 142 0 3 chr17 32096900 32097211 -57407342 - AluSx SINE Alu -2 310 1 2716 171 21 58 chr17 32097211 32097250 -57407303 - L1MB2 LINE L1 -1336 4810 4771 2377 82 0 0 chr17 32097258 32097564 -57406989 - AluY SINE Alu -5 306 1 545 310 7 0 chr17 32097740 32097885 -57406668 + Charlie7 DNA MER1_type 228 373 -2239 * 1291 205 91 86 chr17 32097881 32098138 -57406415 + Charlie7 DNA MER1_type 1644 1898 -714 2148 97 6 6 chr17 32098138 32098449 -57406104 + AluY SINE Alu 1 311 0 1291 205 91 86 chr17 32098449 32098682 -57405871 + Charlie7 DNA MER1_type 1898 2140 -472 2075 104 0 16 chr17 32098682 32098990 -57405563 + AluSx SINE Alu 1 303 -9 1291 205 91 86 chr17 32098990 32099083 -57405470 + Charlie7 DNA MER1_type 2140 2231 -381 905 181 0 0 chr17 32099090 32099273 -57405280 + AluSg/x SINE Alu 130 312 0 2208 100 0 3 chr17 32099330 32099629 -57404924 + AluSx SINE Alu 1 298 -14 1079 124 6 0 chr17 32099629 32099790 -57404763 + AluSg/x SINE Alu 134 295 -17 34 65 0 0 chr17 32099831 32099893 -57404660 + AT_rich Low_complexity Low_complexity 1 62 0 24 67 0 0 chr17 32099941 32099986 -57404567 + AT_rich Low_complexity Low_complexity 1 45 0 26 0 0 0 chr17 32100050 32100076 -57404477 + AT_rich Low_complexity Low_complexity 1 26 0 638 292 42 25 chr17 32100254 32100490 -57404063 + MIR SINE MIR 9 248 -14 2162 115 3 0 chr17 32100969 32101273 -57403280 + AluSq SINE Alu 1 305 -8 1716 179 17 0 chr17 32101346 32101642 -57402911 + AluSx SINE Alu 10 310 -2 550 236 36 30 chr17 32102036 32102201 -57402352 - MLT1J LTR MaLR -4 507 342 292 274 14 0 chr17 32102293 32102366 -57402187 - ERVL LTR ERVL -1490 4274 4201 614 231 13 64 chr17 32102426 32102582 -57401971 - ERVL LTR ERVL -2739 2257 2110 485 194 117 0 chr17 32102611 32102714 -57401839 - ERVL LTR ERVL -3194 1802 1688 791 293 95 11 chr17 32102743 32103026 -57401527 - ERVL LTR ERVL -3442 1554 1248 2529 288 55 39 chr17 32103064 32103367 -57401186 - ERVL LTR ERVL -3824 1172 875 2162 75 3 20 chr17 32103367 32103661 -57400892 - AluY SINE Alu -22 289 1 2529 288 55 39 chr17 32103661 32104461 -57400092 - ERVL LTR ERVL -4121 875 51 1653 176 3 0 chr17 32104497 32104786 -57399767 - AluJb SINE Alu -22 290 1 541 244 166 28 chr17 32104804 32105096 -57399457 - LTR16A LTR ERVL -72 378 34 1573 145 17 54 chr17 32105187 32105519 -57399034 - AluJb SINE Alu 0 321 1 968 262 44 0 chr17 32105727 32105952 -57398601 + Charlie8 DNA MER1_type 10 244 -2173 1813 122 7 43 chr17 32106034 32106337 -57398216 - AluSx SINE Alu -20 292 1 1766 159 3 16 chr17 32106424 32106732 -57397821 - AluJb SINE Alu -8 304 1 1504 157 17 34 chr17 32107654 32107948 -57396605 + AluJo SINE Alu 7 295 -17 2304 81 3 0 chr17 32108003 32108301 -57396252 + AluSg SINE Alu 1 299 -11 241 333 30 0 chr17 32108474 32108540 -57396013 + MIR SINE MIR 35 102 -160 287 336 0 0 chr17 32109502 32109615 -57394938 + C-rich Low_complexity Low_complexity 1 113 0 201 302 21 10 chr17 32109646 32109742 -57394811 + C-rich Low_complexity Low_complexity 5 101 0 246 62 0 0 chr17 32109922 32109954 -57394599 + (GGGAA)n Simple_repeat Simple_repeat 2 33 0 34 55 0 0 chr17 32111496 32111551 -57393002 + AT_rich Low_complexity Low_complexity 1 55 0 2390 72 0 3 chr17 32111621 32111925 -57392628 + AluSx SINE Alu 1 303 -9 2253 83 0 3 chr17 32112714 32113015 -57391538 - AluSq SINE Alu -13 300 1 21 36 0 0 chr17 32113162 32113190 -57391363 + AT_rich Low_complexity Low_complexity 1 28 0 274 122 0 0 chr17 32113623 32113664 -57390889 - U6 snRNA snRNA -66 41 1 26 30 0 0 chr17 32113688 32113721 -57390832 + AT_rich Low_complexity Low_complexity 1 33 0 2128 99 3 7 chr17 32113721 32114023 -57390530 - AluSc SINE Alu -8 301 1 281 312 65 39 chr17 32114470 32114624 -57389929 + MIR3 SINE MIR 51 208 0 215 396 51 9 chr17 32114659 32114876 -57389677 + L2 LINE L2 2810 3035 -237 283 206 55 27 chr17 32165084 32165157 -57339396 - MLT1F1 LTR MaLR -184 383 309 2502 61 0 0 chr17 32165894 32166189 -57338364 + AluY SINE Alu 1 295 -16 1856 140 3 33 chr17 32166533 32166549 -57338004 - AluJb SINE Alu -13 299 284 297 51 0 0 chr17 32166549 32166588 -57337965 + (CA)n Simple_repeat Simple_repeat 1 39 0 1856 140 3 33 chr17 32166588 32166878 -57337675 - AluJb SINE Alu -28 284 2 2475 77 0 6 chr17 32167117 32167430 -57337123 - AluY SINE Alu 0 311 1 367 257 108 77 chr17 32167477 32167699 -57336854 + L2 LINE L2 2525 2753 -561 824 272 120 38 chr17 32167710 32168258 -57336295 - MLT1H1 LTR MaLR -2 553 1 622 230 42 150 chr17 32168265 32168514 -57336039 + L2 LINE L2 2762 2963 -350 1885 113 18 15 chr17 32168514 32168788 -57335765 - AluSx SINE Alu -26 286 12 622 230 42 150 chr17 32168788 32168883 -57335670 + L2 LINE L2 2963 3067 -246 578 342 117 7 chr17 32169012 32169319 -57335234 - L2 LINE L2 -744 2570 2230 1134 171 32 0 chr17 32169319 32169536 -57335017 - MLT1E1 LTR MaLR 0 654 431 678 207 35 0 chr17 32169537 32169682 -57334871 - HERV16 LTR ERVL -4377 619 470 468 0 0 0 chr17 32169717 32169769 -57334784 + (TCCA)n Simple_repeat Simple_repeat 1 52 0 584 191 88 0 chr17 32169811 32169947 -57334606 - HERV16 LTR ERVL -4537 459 312 768 221 86 89 chr17 32169975 32170301 -57334252 - LTR16A LTR ERVL -124 326 2 1671 242 102 8 chr17 32170386 32170982 -57333571 - L1ME3A LINE L1 -5 6165 5514 857 207 28 116 chr17 32171529 32171960 -57332593 - L1MC5 LINE L1 -897 6911 6547 519 263 160 65 chr17 32172007 32172502 -57332051 - L1MC4a LINE L1 -1465 6343 5802 312 27 0 0 chr17 32172588 32172625 -57331928 + (CA)n Simple_repeat Simple_repeat 2 38 0 1399 130 19 5 chr17 32172625 32172832 -57331721 - AluSg/x SINE Alu -24 288 79 2043 229 22 39 chr17 32172906 32173390 -57331163 - MLT2E LTR ERVL -51 577 103 984 176 124 0 chr17 32173390 32173600 -57330953 - MER46A DNA MER2_type 0 236 1 2043 229 22 39 chr17 32173600 32173700 -57330853 - MLT2E LTR ERVL -525 103 3 2305 106 0 10 chr17 32174060 32174371 -57330182 + AluSx SINE Alu 1 308 -4 1348 189 110 0 chr17 32174373 32174674 -57329879 + MER7A DNA MER2_type 1 332 -14 807 312 94 83 chr17 32174728 32174822 -57329731 - L1M4c LINE L1 -727 1400 1309 1670 171 71 6 chr17 32174822 32175144 -57329409 + MER2 DNA MER2_type 2 344 0 807 312 94 83 chr17 32175144 32175192 -57329361 - L1M4c LINE L1 -818 1309 1263 1666 35 0 0 chr17 32175192 32175390 -57329163 - L1PA5 LINE L1 -2 6152 5955 807 312 94 83 chr17 32175390 32176157 -57328396 - L1M4c LINE L1 -864 1263 55 581 239 9 100 chr17 32176474 32176704 -57327849 - MER3 DNA MER1_type 0 209 1 1623 157 49 14 chr17 32176930 32177216 -57327337 - AluJo SINE Alu -10 302 7 2202 103 20 3 chr17 32177362 32177664 -57326889 - AluSx SINE Alu -5 307 1 2001 117 34 0 chr17 32178035 32178333 -57326220 - AluSc SINE Alu -1 308 1 267 31 0 0 chr17 32180282 32180314 -57324239 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 2039 118 0 7 chr17 32180314 32180594 -57323959 - AluSx SINE Alu -34 278 1 496 204 41 0 chr17 32180689 32180787 -57323766 - LTR37B LTR ERV1 -360 108 7 1924 123 62 54 chr17 32180796 32180983 -57323570 - L1MA5A LINE L1 0 6297 6113 2240 77 3 27 chr17 32180983 32181282 -57323271 + AluY SINE Alu 1 292 -19 1924 123 62 54 chr17 32181282 32181499 -57323054 - L1MA5A LINE L1 -184 6113 5890 25 0 0 0 chr17 32183067 32183092 -57321461 + AT_rich Low_complexity Low_complexity 1 25 0 1745 179 0 7 chr17 32183400 32183691 -57320862 - AluSx SINE Alu -20 292 4 2138 133 0 0 chr17 32185060 32185368 -57319185 + AluSx SINE Alu 1 308 -4 1996 85 0 0 chr17 32185502 32185750 -57318803 + AluSq SINE Alu 1 248 -65 284 222 70 35 chr17 32185789 32185960 -57318593 + L1MC5 LINE L1 7546 7722 -239 362 194 24 12 chr17 32186781 32186870 -57317683 - AluJb SINE Alu -73 229 173 212 0 36 0 chr17 32187186 32187214 -57317339 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 319 260 221 32 chr17 32187346 32187500 -57317053 - MIR SINE MIR -78 184 2 1967 138 0 10 chr17 32188995 32189300 -57315253 - AluJo SINE Alu -10 302 1 254 277 0 15 chr17 32189420 32189485 -57315068 - L1MEd LINE L1 -6050 69 6 678 274 113 81 chr17 32189594 32190250 -57314303 - L1MEd LINE L1 -5298 821 145 308 219 95 19 chr17 32191168 32191273 -57313280 - L2 LINE L2 -82 3231 3119 1270 234 86 94 chr17 32191552 32192704 -57311849 - L1MC5 LINE L1 -167 7794 6652 1886 166 3 7 chr17 32192848 32193150 -57311403 - AluJo SINE Alu -8 304 4 281 367 58 0 chr17 32195096 32195216 -57309337 - L2 LINE L2 -8 3305 3179 1508 141 91 19 chr17 32195373 32195636 -57308917 + AluJo SINE Alu 1 282 -30 345 62 0 0 chr17 32195638 32195686 -57308867 + (TC)n Simple_repeat Simple_repeat 1 48 0 237 279 0 0 chr17 32195687 32195773 -57308780 + (TA)n Simple_repeat Simple_repeat 2 87 0 504 315 87 42 chr17 32195788 32196029 -57308524 - MIR SINE MIR -10 252 1 2026 112 3 48 chr17 32196298 32196433 -57308120 + AluSq SINE Alu 1 140 -173 2343 82 20 0 chr17 32196433 32196736 -57307817 + AluY SINE Alu 1 309 -2 2026 112 3 48 chr17 32196736 32196914 -57307639 + AluSq SINE Alu 140 300 -13 618 275 59 18 chr17 32197637 32197859 -57306694 + L1ME4a LINE L1 5518 5748 -373 201 324 0 54 chr17 32197935 32198009 -57306544 + MIR SINE MIR 41 111 -97 2395 92 3 0 chr17 32198126 32198431 -57306122 + AluSg SINE Alu 1 306 -4 297 229 153 28 chr17 32198469 32198613 -57305940 + L1ME4a LINE L1 5878 6039 -82 841 224 6 0 chr17 32198645 32198810 -57305743 - FRAM SINE Alu 0 166 1 6511 69 21 0 chr17 32198829 32200467 -57304086 - L1PA7 LINE L1 -4 6150 4488 25278 92 21 15 chr17 32200469 32202893 -57301660 + L1P LINE L1 748 3203 -2943 1532 85 0 5 chr17 32202893 32203092 -57301461 + AluY SINE Alu 98 295 -16 25278 92 21 15 chr17 32203092 32204446 -57300107 + L1P LINE L1 3203 4548 -1598 188 362 59 53 chr17 32206627 32206779 -57297774 + L3 LINE CR1 1394 1546 -31 3383 63 16 2 chr17 32206883 32207311 -57297242 + MLT2A1 LTR ERVL 3 436 -8 7687 60 3 26 chr17 32207315 32207664 -57296889 + HERVL-A1 LTR ERVL 1 356 -5298 2626 29 7 3 chr17 32207664 32207974 -57296579 + AluY SINE Alu 1 311 0 7687 60 3 26 chr17 32207974 32208630 -57295923 + HERVL-A1 LTR ERVL 356 983 -4671 * 23060 63 21 8 chr17 32208625 32210494 -57294059 + HERVL-A1 LTR ERVL 2664 4590 -1064 2236 91 7 0 chr17 32210494 32210791 -57293762 - AluSc SINE Alu -10 299 1 23060 63 21 8 chr17 32210791 32211871 -57292682 + HERVL-A1 LTR ERVL 4590 5654 0 3504 70 0 0 chr17 32211871 32212315 -57292238 + MLT2A1 LTR ERVL 1 444 0 1282 166 35 35 chr17 32212670 32212954 -57291599 - L1MB7 LINE L1 -16 6168 5885 2362 82 3 3 chr17 32213055 32213358 -57291195 - AluSp SINE Alu -10 303 1 1167 132 11 5 chr17 32213393 32213582 -57290971 + AluSg/x SINE Alu 121 310 -2 587 335 52 24 chr17 32213738 32214197 -57290356 - L1MC4a LINE L1 -1902 5906 5435 911 99 7 0 chr17 32214230 32214372 -57290181 + L1MA9 LINE L1 6170 6312 0 1637 228 55 7 chr17 32214605 32215009 -57289544 + L1ME1 LINE L1 5662 6084 -82 345 261 73 24 chr17 32215116 32215298 -57289255 - L1MC4a LINE L1 -716 5450 5262 5417 71 24 12 chr17 32215470 32216227 -57288326 - MER4E LTR ERV1 0 766 1 654 215 128 29 chr17 32216409 32216581 -57287972 + MER5A DNA MER1_type 1 189 0 619 175 8 42 chr17 32216649 32216769 -57287784 - FLAM_A SINE Alu -17 116 1 6105 121 39 6 chr17 32216842 32216967 -57287586 + L1MA5A LINE L1 5173 5292 -1005 221 0 0 33 chr17 32216967 32216997 -57287556 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6105 121 39 6 chr17 32216997 32217933 -57286620 + L1MA5A LINE L1 5292 6265 -32 24 0 0 0 chr17 32217942 32217966 -57286587 + AT_rich Low_complexity Low_complexity 1 24 0 2706 136 55 103 chr17 32218674 32219306 -57285247 - L1MB3 LINE L1 -10 6173 5572 8487 216 59 35 chr17 32219680 32220335 -57284218 - L1MB3 LINE L1 -847 5299 4661 2394 73 0 7 chr17 32220335 32220636 -57283917 - AluY SINE Alu -12 299 1 8487 216 59 35 chr17 32220636 32221922 -57282631 - L1MB3 LINE L1 -1485 4661 3278 1882 150 0 14 chr17 32221922 32222208 -57282345 - AluSx SINE Alu -30 282 1 8487 216 59 35 chr17 32222208 32222845 -57281708 - L1MB3 LINE L1 -2868 3278 2658 2052 149 0 0 chr17 32223143 32223445 -57281108 + AluSx SINE Alu 1 302 -10 445 187 37 90 chr17 32225822 32225956 -57278597 - MER20B DNA MER1_type -598 185 59 21 0 0 0 chr17 32230099 32230120 -57274433 + AT_rich Low_complexity Low_complexity 1 21 0 276 273 23 11 chr17 32231741 32231829 -57272724 - L2 LINE L2 -22 3250 3162 2163 122 0 0 chr17 32231886 32232190 -57272363 + AluSq SINE Alu 3 306 -7 1226 155 9 40 chr17 32232266 32232492 -57272061 - MER20 DNA MER1_type 0 219 1 460 271 48 32 chr17 32232680 32232868 -57271685 - L3 LINE CR1 -171 1406 1216 1466 160 26 59 chr17 32232916 32233223 -57271330 - AluSx SINE Alu -15 297 1 515 305 7 13 chr17 32233382 32233533 -57271020 + L2 LINE L2 3163 3312 -1 2105 131 0 10 chr17 32233576 32233888 -57270665 + AluSx SINE Alu 1 309 -3 21 0 0 0 chr17 32233934 32233955 -57270598 + AT_rich Low_complexity Low_complexity 1 21 0 235 277 226 6 chr17 32234018 32234177 -57270376 - L3 LINE CR1 -545 1032 839 4938 124 94 85 chr17 32234743 32235702 -57268851 - Tigger3b DNA MER2_type -1798 1230 256 2131 101 3 7 chr17 32235702 32235989 -57268564 + AluSx SINE Alu 1 286 -26 4938 124 94 85 chr17 32235989 32236247 -57268306 - Tigger3b DNA MER2_type -2772 256 2 530 223 66 6 chr17 32237150 32237316 -57267237 + MER104 DNA MER2_type 2 177 -3 758 180 20 7 chr17 32238407 32238557 -57265996 - FRAM SINE Alu -26 150 1 806 234 32 5 chr17 32238704 32238892 -57265661 + MIR SINE MIR 70 262 0 408 340 105 15 chr17 32239827 32240228 -57264325 + L2 LINE L2 2622 3053 -219 1974 136 24 0 chr17 32240585 32240879 -57263674 - AluSx SINE Alu -11 301 1 2007 91 91 0 chr17 32240957 32241231 -57263322 + AluSx SINE Alu 1 299 -13 647 168 0 181 chr17 32241692 32241833 -57262720 - L1MB8 LINE L1 -12 6166 6080 2213 128 0 0 chr17 32241833 32242145 -57262408 - AluSx SINE Alu 0 312 1 647 168 0 181 chr17 32242145 32242229 -57262324 - L1MB8 LINE L1 -98 6080 5982 21 0 0 0 chr17 32242234 32242255 -57262298 + AT_rich Low_complexity Low_complexity 1 21 0 35 0 0 0 chr17 32242648 32242683 -57261870 + AT_rich Low_complexity Low_complexity 1 35 0 2961 173 93 24 chr17 32242683 32242759 -57261794 - L1MB7 LINE L1 -5 6179 6110 1200 51 0 6 chr17 32242759 32242915 -57261638 - L1PA4 LINE L1 -3 6152 5998 2961 173 93 24 chr17 32242915 32243514 -57261039 - L1MB7 LINE L1 -74 6110 5457 305 322 110 67 chr17 32243596 32243941 -57260612 + L1ME4a LINE L1 5520 5879 -242 30 69 0 0 chr17 32244472 32244530 -57260023 + AT_rich Low_complexity Low_complexity 1 58 0 23 68 0 0 chr17 32245214 32245258 -57259295 + AT_rich Low_complexity Low_complexity 1 44 0 1481 140 54 29 chr17 32245830 32246145 -57258408 - MER33 DNA MER1_type -1 323 1 1026 233 18 9 chr17 32246154 32246373 -57258180 - MER58A DNA MER1_type -1 223 3 560 235 80 19 chr17 32248627 32248789 -57255764 + MIR SINE MIR 41 212 -50 369 0 0 0 chr17 32249593 32249634 -57254919 + (CA)n Simple_repeat Simple_repeat 2 42 0 715 224 63 44 chr17 32251022 32251227 -57253326 - MER3 DNA MER1_type 0 209 1 937 198 24 51 chr17 32251724 32252066 -57252487 - L1MB8 LINE L1 -22 6161 5845 1764 178 7 3 chr17 32254779 32255083 -57249470 + MER2 DNA MER2_type 41 345 0 234 0 0 0 chr17 32255318 32255344 -57249209 + (T)n Simple_repeat Simple_repeat 1 26 0 247 204 0 19 chr17 32256512 32256566 -57247987 + L2 LINE L2 3217 3269 -3 543 266 90 17 chr17 32257160 32257337 -57247216 + L2 LINE L2 2762 2951 -363 991 128 36 8 chr17 32257338 32257528 -57247025 - L1MB1 LINE L1 -1 6167 6003 2321 75 16 10 chr17 32257666 32257974 -57246579 + AluY SINE Alu 1 310 -1 2002 118 0 37 chr17 32259729 32260025 -57244528 - AluSx SINE Alu -27 285 1 251 281 0 0 chr17 32260221 32260278 -57244275 + L2 LINE L2 3257 3313 0 1691 179 10 16 chr17 32260544 32260851 -57243702 - AluSx SINE Alu -7 305 1 3413 187 101 103 chr17 32261176 32261727 -57242826 + L1MCa LINE L1 32 582 -5844 2209 107 3 3 chr17 32261727 32262027 -57242526 + AluY SINE Alu 1 300 -11 3413 187 101 103 chr17 32262027 32262878 -57241675 + L1MCa LINE L1 582 3463 -2963 5857 94 29 25 chr17 32262906 32263037 -57241516 - L1MA3 LINE L1 0 6305 6176 2248 103 0 3 chr17 32263037 32263338 -57241215 - AluSq SINE Alu -13 300 1 5857 94 29 25 chr17 32263338 32264146 -57240407 - L1MA3 LINE L1 -129 6176 5362 2120 133 0 0 chr17 32264158 32264452 -57240101 - AluSx SINE Alu -18 294 1 21463 120 46 44 chr17 32264452 32265580 -57238973 - L1 LINE L1 -3845 3720 2596 649 109 0 0 chr17 32265580 32265681 -57238872 - AluSp/q SINE Alu -3 310 210 21463 120 46 44 chr17 32265681 32266455 -57238098 - L1 LINE L1 -4969 2596 1825 264 30 0 0 chr17 32266455 32266488 -57238065 + (TG)n Simple_repeat Simple_repeat 2 34 0 21463 120 46 44 chr17 32266488 32268176 -57236377 - L1 LINE L1 -5740 1825 16 3876 181 54 14 chr17 32268635 32269357 -57235196 - MER21B LTR ERV1 -109 754 4 256 294 15 0 chr17 32269436 32269504 -57235049 + L2 LINE L2 3237 3305 -8 392 301 138 8 chr17 32269768 32269891 -57234662 - L2 LINE L2 -12 3260 3122 419 342 25 13 chr17 32269986 32270144 -57234409 - MIR SINE MIR -89 173 14 2270 94 3 3 chr17 32270189 32270486 -57234067 + AluSc SINE Alu 1 297 -12 661 279 172 0 chr17 32270880 32271142 -57233411 + L1ME3A LINE L1 5577 5883 -287 2175 106 3 0 chr17 32271195 32271477 -57233076 + AluSp SINE Alu 1 283 -30 1980 129 42 0 chr17 32271806 32272093 -57232460 - AluSx SINE Alu -9 303 5 276 292 56 11 chr17 32275021 32275110 -57229443 + L2 LINE L2 3200 3292 -21 222 118 0 0 chr17 32275115 32275149 -57229404 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 28 0 0 0 chr17 32275250 32275278 -57229275 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 32275395 32275424 -57229129 + AT_rich Low_complexity Low_complexity 1 29 0 1899 131 25 45 chr17 32277258 32277572 -57226981 + AluJo SINE Alu 1 308 -4 24 67 0 0 chr17 32277624 32277669 -57226884 + AT_rich Low_complexity Low_complexity 1 45 0 21 36 0 0 chr17 32278021 32278049 -57226504 + AT_rich Low_complexity Low_complexity 1 28 0 417 104 15 0 chr17 32279077 32279144 -57225409 + HY3 scRNA scRNA 30 97 -4 26 30 0 0 chr17 32279299 32279332 -57225221 + AT_rich Low_complexity Low_complexity 1 33 0 2038 101 25 4 chr17 32279409 32279713 -57224840 - AluSx SINE Alu 0 310 1 28 86 0 0 chr17 32282064 32282134 -57222419 + AT_rich Low_complexity Low_complexity 1 70 0 26 0 0 0 chr17 32282574 32282600 -57221953 + AT_rich Low_complexity Low_complexity 1 26 0 232 248 114 38 chr17 32282929 32283034 -57221519 + MIR SINE MIR 100 212 -50 337 308 131 8 chr17 32283273 32283403 -57221150 + MIR3 SINE MIR 38 183 -25 2209 111 0 7 chr17 32284235 32284541 -57220012 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr17 32285275 32285296 -57219257 + AT_rich Low_complexity Low_complexity 1 21 0 203 350 0 0 chr17 32285408 32285489 -57219064 - MIR SINE MIR -69 139 71 717 203 0 0 chr17 32286175 32286293 -57218260 + FLAM_C SINE Alu 1 118 -25 743 102 0 29 chr17 32286294 32286431 -57218122 + (TAGA)n Simple_repeat Simple_repeat 1 133 0 1663 168 52 3 chr17 32286432 32286718 -57217835 + AluJo SINE Alu 5 304 -8 200 140 0 35 chr17 32286725 32286782 -57217771 + (TAAAAA)n Simple_repeat Simple_repeat 4 58 0 274 318 0 0 chr17 32286905 32286993 -57217560 + MIR SINE MIR 175 262 0 23 0 0 0 chr17 32287077 32287100 -57217453 + AT_rich Low_complexity Low_complexity 1 23 0 226 233 41 14 chr17 32287146 32287219 -57217334 - HAL1b LINE L1 -83 1265 1191 2226 93 0 39 chr17 32287386 32287696 -57216857 + AluSq SINE Alu 1 298 -15 646 263 16 43 chr17 32287710 32287965 -57216588 + L1MEd LINE L1 1010 1257 -4862 284 256 78 0 chr17 32288286 32288376 -57216177 - L1ME LINE L1 -462 5659 5563 195 329 27 14 chr17 32289353 32289426 -57215127 + MIR SINE MIR 19 92 -116 2120 122 3 3 chr17 32290205 32290501 -57214052 - AluSq SINE Alu -17 296 1 250 333 80 28 chr17 32290970 32291183 -57213370 + L2 LINE L2 2304 2527 -787 2274 91 3 3 chr17 32291616 32291912 -57212641 + AluSc SINE Alu 1 296 -13 1932 153 0 23 chr17 32291967 32292275 -57212278 - AluJo SINE Alu -11 301 1 235 287 9 26 chr17 32292631 32292746 -57211807 + L1MC/D LINE L1 5687 5799 -2009 1810 259 61 46 chr17 32292760 32293320 -57211233 - MLT1K LTR MaLR -17 571 4 1875 165 0 9 chr17 32293596 32293911 -57210642 + AluJb SINE Alu 1 312 0 312 250 73 10 chr17 32293994 32294090 -57210463 - MIR SINE MIR -1 261 160 242 327 94 38 chr17 32294120 32294279 -57210274 - MER5A DNA MER1_type -8 181 14 * 304 255 128 43 chr17 32294139 32294280 -57210273 + MER5A DNA MER1_type 37 189 0 21 0 0 0 chr17 32294718 32294739 -57209814 + AT_rich Low_complexity Low_complexity 1 21 0 2205 115 10 3 chr17 32294741 32295046 -57209507 + AluSq SINE Alu 3 309 -4 21 0 0 0 chr17 32296044 32296065 -57208488 + AT_rich Low_complexity Low_complexity 1 21 0 213 39 0 0 chr17 32296584 32296610 -57207943 + (CAA)n Simple_repeat Simple_repeat 2 27 0 274 347 139 0 chr17 32296615 32296759 -57207794 - MIR3 SINE MIR -15 193 30 621 170 47 0 chr17 32298450 32298556 -57205997 + Tigger7 DNA MER2_type 2 112 -621 1981 142 52 16 chr17 32298557 32298924 -57205629 + Tigger7 DNA MER2_type 2108 2487 0 2310 83 0 0 chr17 32299204 32299493 -57205060 + AluY SINE Alu 14 302 -9 719 237 36 48 chr17 32299718 32299967 -57204586 + MER46C DNA MER2_type 1 246 -92 517 310 43 27 chr17 32299993 32300101 -57204452 + MLT1J2 LTR MaLR 37 142 -308 2389 163 21 9 chr17 32300101 32300530 -57204023 - Tigger2a DNA MER2_type 0 434 1 517 310 43 27 chr17 32300530 32300757 -57203796 + MLT1J2 LTR MaLR 142 450 0 847 316 76 6 chr17 32300763 32301092 -57203461 + LTR33 LTR ERVL 3 354 -167 246 245 0 0 chr17 32301157 32301206 -57203347 + LTR33 LTR ERVL 473 521 0 790 192 70 6 chr17 32301234 32301390 -57203163 + FRAM SINE Alu 1 159 -17 204 226 0 0 chr17 32301635 32301688 -57202865 + T-rich Low_complexity Low_complexity 1 53 0 252 0 0 0 chr17 32301752 32301780 -57202773 + (T)n Simple_repeat Simple_repeat 1 28 0 2450 90 0 0 chr17 32301853 32302163 -57202390 - AluSq SINE Alu -3 310 1 1684 158 0 41 chr17 32302214 32302506 -57202047 + AluJo SINE Alu 10 289 -23 276 167 0 0 chr17 32302559 32302601 -57201952 + 5S rRNA rRNA 1 42 -79 551 140 70 35 chr17 32302748 32302862 -57201691 + FLAM_A SINE Alu 23 140 -2 572 217 94 90 chr17 32303380 32303495 -57201058 - MER58C DNA MER1_type -2207 213 95 2181 75 14 31 chr17 32303495 32303789 -57200764 + AluSg SINE Alu 16 304 -6 572 217 94 90 chr17 32303789 32303885 -57200668 - MER58C DNA MER1_type -2325 95 1 249 194 97 48 chr17 32304092 32304216 -57200337 + MER113 DNA MER1_type? 44 173 -348 1920 153 0 13 chr17 32305024 32305324 -57199229 + AluJb SINE Alu 3 298 -14 1876 125 29 35 chr17 32305329 32305349 -57199204 - L1MB7 LINE L1 -54 6130 6111 2410 77 0 0 chr17 32305349 32305648 -57198905 + AluY SINE Alu 1 299 -12 1876 125 29 35 chr17 32305648 32305971 -57198582 - L1MB7 LINE L1 -73 6111 5789 1126 180 19 5 chr17 32305979 32306190 -57198363 - L1MB7 LINE L1 -493 5691 5478 2566 50 0 0 chr17 32306386 32306686 -57197867 + AluY SINE Alu 3 302 -9 1635 128 15 119 chr17 32306699 32307026 -57197527 - AluJo SINE Alu -9 303 11 2011 136 0 29 chr17 32307343 32307519 -57197034 - AluSq SINE Alu -6 307 142 2153 131 0 6 chr17 32307519 32307833 -57196720 - AluSx SINE Alu 0 312 1 2011 136 0 29 chr17 32307833 32307972 -57196581 - AluSq SINE Alu -171 142 1 2100 110 7 0 chr17 32308088 32308378 -57196175 + AluSx SINE Alu 1 292 -20 1113 154 0 11 chr17 32308378 32308553 -57196000 + AluSg/x SINE Alu 135 307 -5 548 259 60 22 chr17 32308559 32308744 -57195809 - MARNA DNA Mariner -48 538 347 446 320 93 0 chr17 32308772 32308816 -57195737 - MARNA DNA Mariner -311 275 236 1311 179 132 12 chr17 32308816 32309073 -57195480 + AluJb SINE Alu 2 289 -23 446 320 93 0 chr17 32309073 32309200 -57195353 - MARNA DNA Mariner -350 236 88 2065 118 20 0 chr17 32309341 32309638 -57194915 - AluSx SINE Alu -9 303 1 210 218 181 75 chr17 32310525 32310658 -57193895 - MIR SINE MIR -50 212 66 342 0 0 0 chr17 32310792 32310830 -57193723 + (TG)n Simple_repeat Simple_repeat 1 38 0 1458 160 86 4 chr17 32310832 32311088 -57193465 - AluJb SINE Alu -33 279 3 2161 8 0 8 chr17 32311100 32311403 -57193150 + L1PA3 LINE L1 5910 6210 0 2055 123 26 23 chr17 32311770 32312080 -57192473 - AluSq SINE Alu -2 311 1 190 344 94 47 chr17 32312408 32312620 -57191933 - L2 LINE L2 -353 2961 2740 319 286 171 24 chr17 32313085 32313337 -57191216 - L1ME LINE L1 -537 5584 5296 522 222 243 0 chr17 32313678 32313872 -57190681 - MIR SINE MIR -4 258 18 2162 115 0 0 chr17 32313975 32314254 -57190299 + AluSx SINE Alu 1 279 -33 342 0 0 0 chr17 32314257 32314295 -57190258 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 180 77 0 0 chr17 32314503 32314529 -57190024 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 338 301 119 28 chr17 32314682 32314858 -57189695 - L1ME LINE L1 -1974 4172 3981 544 258 55 6 chr17 32315253 32315416 -57189137 - MIR SINE MIR -32 230 60 226 203 25 76 chr17 32315441 32315520 -57189033 + L1MC4 LINE L1 6627 6701 -1341 893 223 123 24 chr17 32315675 32315886 -57188667 + MER8 DNA MER2_type 7 238 -1 2419 100 0 0 chr17 32316149 32316459 -57188094 + AluSq SINE Alu 4 313 0 21 0 0 0 chr17 32320954 32320975 -57183578 + AT_rich Low_complexity Low_complexity 1 21 0 807 40 0 0 chr17 32322445 32322545 -57182008 + L1PA3 LINE L1 6056 6155 0 2220 260 95 41 chr17 32323452 32324744 -57179809 - L1MC4a LINE L1 -755 5391 4757 255 333 21 42 chr17 32324973 32325069 -57179484 + MIR3 SINE MIR 93 186 -22 2136 99 0 17 chr17 32325812 32326105 -57178448 + AluSg SINE Alu 1 288 -22 203 171 0 0 chr17 32329644 32329685 -57174868 + (TA)n Simple_repeat Simple_repeat 1 41 0 216 301 52 46 chr17 32329990 32330121 -57174432 - L2 LINE L2 -5 3308 3174 829 173 0 0 chr17 32330121 32330254 -57174299 + FLAM_C SINE Alu 1 133 0 216 301 52 46 chr17 32330254 32330275 -57174278 - L2 LINE L2 -139 3174 3155 1939 132 21 0 chr17 32330283 32330572 -57173981 - AluSx SINE Alu -17 295 1 330 318 8 32 chr17 32330806 32330932 -57173621 + MIR3 SINE MIR 43 165 -43 2122 123 7 10 chr17 32331393 32331694 -57172859 - AluSx SINE Alu -12 300 1 480 356 54 4 chr17 32332215 32332454 -57172099 - MIR SINE MIR -10 252 2 21 82 0 0 chr17 32334099 32334148 -57170405 + AT_rich Low_complexity Low_complexity 1 49 0 1900 152 0 19 chr17 32334189 32334504 -57170049 - AluJb SINE Alu -3 309 1 191 246 72 43 chr17 32334772 32334841 -57169712 + L3b LINE CR1 1288 1358 -225 301 347 50 0 chr17 32334931 32335052 -57169501 - MIR SINE MIR -116 146 20 2134 98 3 30 chr17 32335481 32335786 -57168767 + AluSx SINE Alu 3 299 -13 23 0 0 0 chr17 32335860 32335883 -57168670 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr17 32336339 32336374 -57168179 + AT_rich Low_complexity Low_complexity 1 35 0 2204 104 0 7 chr17 32336673 32336972 -57167581 + AluSx SINE Alu 1 297 -15 252 0 0 0 chr17 32336974 32337002 -57167551 + (TG)n Simple_repeat Simple_repeat 1 28 0 24 0 0 0 chr17 32337162 32337186 -57167367 + AT_rich Low_complexity Low_complexity 1 24 0 363 280 179 12 chr17 32337648 32337816 -57166737 + MIR SINE MIR 64 259 -3 3399 90 17 0 chr17 32337862 32338339 -57166214 - L1MA2 LINE L1 -462 5842 5358 1820 108 34 3 chr17 32338501 32338797 -57165756 + L1MA1 LINE L1 5998 6302 0 283 272 136 0 chr17 32338882 32338985 -57165568 + MIR SINE MIR 124 240 -22 888 190 155 20 chr17 32339189 32339389 -57165164 - AluJo SINE Alu -32 280 54 549 247 41 41 chr17 32340159 32340305 -57164248 + MER5B DNA MER1_type 32 177 -1 22 0 0 0 chr17 32340350 32340372 -57164181 + AT_rich Low_complexity Low_complexity 1 22 0 342 0 0 0 chr17 32340611 32340649 -57163904 + (CA)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr17 32342615 32342637 -57161916 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr17 32343578 32343602 -57160951 + AT_rich Low_complexity Low_complexity 1 24 0 192 313 0 60 chr17 32343627 32343694 -57160859 - MER5A DNA MER1_type -103 86 24 333 0 0 0 chr17 32345337 32345374 -57159179 + (CA)n Simple_repeat Simple_repeat 2 38 0 1892 137 0 69 chr17 32345441 32345776 -57158777 + AluSx SINE Alu 1 312 0 641 226 0 24 chr17 32345776 32345900 -57158653 + FLAM_A SINE Alu 2 122 -11 1721 123 0 61 chr17 32346351 32346628 -57157925 + AluJb SINE Alu 1 260 -52 414 303 15 8 chr17 32346645 32346777 -57157776 - MER5A DNA MER1_type -50 139 7 969 104 129 136 chr17 32347246 32347295 -57157258 - L1MA4 LINE L1 -5 6295 6247 2228 104 10 0 chr17 32347295 32347603 -57156950 - AluSx SINE Alu -1 311 1 969 104 129 136 chr17 32347603 32347798 -57156755 - L1MA4 LINE L1 -53 6247 6051 1964 150 13 0 chr17 32347798 32348098 -57156455 - AluSx SINE Alu -8 304 1 969 104 129 136 chr17 32348098 32348132 -57156421 - L1MA4 LINE L1 -249 6051 6018 685 294 105 47 chr17 32348290 32348739 -57155814 - MLT1K LTR MaLR -2 586 112 2222 81 7 0 chr17 32349609 32349894 -57154659 + AluSq SINE Alu 8 294 -19 394 145 17 0 chr17 32350155 32350240 -57154313 - AluS SINE Alu -18 282 228 1760 107 29 0 chr17 32350252 32350496 -57154057 - AluSq SINE Alu -62 251 1 21 0 0 0 chr17 32350527 32350548 -57154005 + AT_rich Low_complexity Low_complexity 1 21 0 418 237 105 13 chr17 32351587 32351739 -57152814 + MIR SINE MIR 3 168 -94 1003 126 0 50 chr17 32352272 32352431 -57152122 + FAM SINE Alu 22 172 -13 307 267 97 68 chr17 32354832 32355038 -57149515 + L1MB3 LINE L1 4556 4767 -1379 821 126 6 120 chr17 32355227 32355410 -57149143 + AluJb SINE Alu 140 301 -11 2243 92 0 0 chr17 32355654 32355936 -57148617 + AluSg SINE Alu 1 282 -28 294 95 0 0 chr17 32355936 32355978 -57148575 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 523 173 127 9 chr17 32356081 32356191 -57148362 + FLAM_A SINE Alu 1 123 -10 373 324 7 8 chr17 32356282 32356425 -57148128 + L1MB3 LINE L1 5527 5663 -458 772 195 97 26 chr17 32356461 32356687 -57147866 - L1ME3 LINE L1 0 6162 5921 381 171 67 9 chr17 32356688 32356793 -57147760 + L1MB3 LINE L1 5709 5819 -302 752 121 7 93 chr17 32356803 32356993 -57147560 + L1MB3 LINE L1 6025 6171 0 2311 49 3 39 chr17 32357125 32357431 -57147122 + AluY SINE Alu 1 295 -16 277 330 77 0 chr17 32358195 32358286 -57146267 - L2 LINE L2 -14 3258 3161 353 205 8 0 chr17 32358396 32358523 -57146030 + (TA)n Simple_repeat Simple_repeat 1 128 0 21 0 0 0 chr17 32358557 32358578 -57145975 + AT_rich Low_complexity Low_complexity 1 21 0 1896 138 0 48 chr17 32358909 32359220 -57145333 - AluJb SINE Alu -16 296 1 26 0 0 0 chr17 32359493 32359519 -57145034 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr17 32359825 32359849 -57144704 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr17 32361186 32361214 -57143339 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr17 32361698 32361733 -57142820 + AT_rich Low_complexity Low_complexity 1 35 0 558 233 45 74 chr17 32362307 32362509 -57142044 - L2 LINE L2 -17 3296 3101 399 278 70 9 chr17 32362834 32362949 -57141604 - MIR SINE MIR -116 146 25 183 42 0 0 chr17 32364079 32364103 -57140450 + (A)n Simple_repeat Simple_repeat 1 24 0 263 246 123 44 chr17 32364196 32364310 -57140243 - MIR SINE MIR -16 246 124 1891 149 7 0 chr17 32364474 32364763 -57139790 + AluJb SINE Alu 1 291 -21 235 161 36 0 chr17 32364768 32364824 -57139729 + (TA)n Simple_repeat Simple_repeat 1 58 0 339 25 0 0 chr17 32364826 32364866 -57139687 + (TG)n Simple_repeat Simple_repeat 2 41 0 237 132 0 0 chr17 32364934 32364972 -57139581 + (TG)n Simple_repeat Simple_repeat 2 39 0 200 214 179 0 chr17 32364977 32365033 -57139520 + MIR SINE MIR 82 147 -115 374 265 148 19 chr17 32365324 32365486 -57139067 - MIR3 SINE MIR -5 203 21 1847 145 35 0 chr17 32365561 32365843 -57138710 + AluSx SINE Alu 1 292 -20 1958 170 0 0 chr17 32366508 32366808 -57137745 + AluJb SINE Alu 1 300 -12 1970 146 3 7 chr17 32366919 32367221 -57137332 + AluJb SINE Alu 1 301 -11 807 135 0 0 chr17 32368038 32368149 -57136404 + AluSq/x SINE Alu 1 111 -201 1542 162 0 0 chr17 32368151 32368392 -57136161 + AluSx SINE Alu 64 304 -8 198 0 0 0 chr17 32370065 32370087 -57134466 + (T)n Simple_repeat Simple_repeat 1 22 0 215 222 19 0 chr17 32371610 32371664 -57132889 + CT-rich Low_complexity Low_complexity 2 56 0 239 0 32 0 chr17 32372335 32372366 -57132187 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 206 256 190 50 chr17 32373137 32373258 -57131295 + MIR SINE MIR 79 216 -46 904 86 111 94 chr17 32374487 32374650 -57129903 + L1MA8 LINE L1 6050 6209 -82 2453 77 3 6 chr17 32374650 32374963 -57129590 - AluSx SINE Alu 0 312 1 904 86 111 94 chr17 32374963 32374998 -57129555 + L1MA8 LINE L1 6209 6242 -49 1531 127 9 0 chr17 32374998 32375226 -57129327 - MER30 DNA MER1_type 0 230 1 904 86 111 94 chr17 32375226 32375260 -57129293 + L1MA8 LINE L1 6242 6287 -4 225 292 31 0 chr17 32375310 32375375 -57129178 + LTR6A LTR ERV1 178 244 -320 28 29 0 0 chr17 32375685 32375720 -57128833 + AT_rich Low_complexity Low_complexity 1 35 0 2254 117 0 3 chr17 32376147 32376456 -57128097 - AluSx SINE Alu -4 308 1 1566 172 52 0 chr17 32376597 32376885 -57127668 + AluJb SINE Alu 1 302 0 444 348 103 46 chr17 32377665 32377967 -57126586 - L2 LINE L2 -455 2859 2576 490 244 122 0 chr17 32377968 32378083 -57126470 + FLAM_A SINE Alu 1 129 -4 444 348 103 46 chr17 32378047 32378458 -57126095 - L2 LINE L2 -738 2576 2142 270 299 49 83 chr17 32378514 32378658 -57125895 + MIR3 SINE MIR 22 160 -48 1847 140 7 3 chr17 32378814 32379107 -57125446 + AluJb SINE Alu 1 294 -18 269 156 109 0 chr17 32381550 32381614 -57122939 - L1ME4a LINE L1 -23 6098 6028 183 42 0 0 chr17 32382699 32382723 -57121830 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2257 75 0 0 chr17 32382725 32383005 -57121548 - AluSc SINE Alu -29 280 1 182 310 113 7 chr17 32383054 32383196 -57121357 + L2 LINE L2 3152 3308 -5 273 119 0 0 chr17 32384329 32384371 -57120182 + (A)n Simple_repeat Simple_repeat 1 42 0 654 247 60 22 chr17 32385266 32385448 -57119105 + MER5A DNA MER1_type 1 189 0 2329 77 3 0 chr17 32386683 32386981 -57117572 - AluY SINE Alu -12 299 1 2027 128 0 0 chr17 32386981 32387286 -57117267 - AluSx SINE Alu -7 305 1 1613 159 72 3 chr17 32388262 32388552 -57116001 + AluJb SINE Alu 1 310 -2 2140 107 0 3 chr17 32389176 32389476 -57115077 - AluSg SINE Alu -11 299 1 785 187 0 8 chr17 32389850 32389984 -57114569 + FLAM_A SINE Alu 1 133 0 23 92 0 0 chr17 32390186 32390251 -57114302 + AT_rich Low_complexity Low_complexity 1 65 0 591 147 0 11 chr17 32390962 32391213 -57113340 + AluJb SINE Alu 1 303 -9 2019 108 3 10 chr17 32391381 32391669 -57112884 - AluSx SINE Alu -15 297 12 220 283 9 94 chr17 32392421 32392527 -57112026 - L2 LINE L2 -60 3212 3116 528 110 81 88 chr17 32393543 32393679 -57110874 - L1ME4a LINE L1 -28 6093 5959 198 0 0 0 chr17 32394874 32394896 -57109657 + (ATTAG)n Simple_repeat Simple_repeat 5 26 0 721 198 77 16 chr17 32395683 32395865 -57108688 - L1ME3A LINE L1 -9 6161 5969 1698 182 0 0 chr17 32395979 32396265 -57108288 + AluJo SINE Alu 5 290 -22 1944 166 45 0 chr17 32396862 32397194 -57107359 + MER7A DNA MER2_type 2 346 0 26 0 0 0 chr17 32398250 32398276 -57106277 + AT_rich Low_complexity Low_complexity 1 26 0 181 313 61 68 chr17 32401522 32401669 -57102884 + MER5B DNA MER1_type 33 178 0 1816 133 48 0 chr17 32402339 32402633 -57101920 + AluSx SINE Alu 1 308 -4 1976 57 4 0 chr17 32403489 32403736 -57100817 + AluY SINE Alu 55 302 -9 2285 82 7 0 chr17 32403891 32404194 -57100359 + AluSp SINE Alu 1 305 -8 191 250 71 0 chr17 32404668 32404724 -57099829 + L2 LINE L2 3248 3307 -6 402 304 8 0 chr17 32405139 32405264 -57099289 + L1ME4a LINE L1 4484 4609 -1537 382 233 37 132 chr17 32405494 32405683 -57098870 - MLT1I LTR MaLR -42 367 197 855 168 103 0 chr17 32405861 32406016 -57098537 + MER3 DNA MER1_type 39 209 0 390 210 156 72 chr17 32405870 32406037 -57098516 - MER3 DNA MER1_type 0 209 29 * 321 291 71 7 chr17 32406058 32406199 -57098354 - MLT1I LTR MaLR -259 150 1 1819 133 28 0 chr17 32406235 32406521 -57098032 + AluSx SINE Alu 7 300 -12 311 249 34 67 chr17 32406637 32406846 -57097707 + L1ME4a LINE L1 5269 5470 -2338 301 236 191 80 chr17 32406918 32406948 -57097605 + L1ME4a LINE L1 5586 5611 -510 2291 81 3 7 chr17 32406948 32407255 -57097298 + AluSp SINE Alu 1 306 -7 301 236 191 80 chr17 32407255 32407601 -57096952 + L1ME4a LINE L1 5611 6004 -117 1966 111 13 17 chr17 32408034 32408173 -57096380 + AluSq SINE Alu 1 139 -174 2264 93 3 3 chr17 32408173 32408484 -57096069 + AluSp SINE Alu 1 311 -2 1966 111 13 17 chr17 32408484 32408642 -57095911 + AluSq SINE Alu 139 297 -16 301 146 250 0 chr17 32408948 32409044 -57095509 - L2 LINE L2 -219 3053 2934 260 111 0 0 chr17 32409104 32409140 -57095413 + MIR SINE MIR 216 251 -11 181 111 0 0 chr17 32409921 32409948 -57094605 - L2 LINE L2 -39 3233 3207 217 348 51 34 chr17 32409992 32410110 -57094443 - MIR SINE MIR -123 139 20 1283 220 130 75 chr17 32410149 32410512 -57094041 - MLT1D LTR MaLR 0 505 163 1882 155 0 7 chr17 32410512 32410822 -57093731 - AluJb SINE Alu -4 308 1 1283 220 130 75 chr17 32410822 32410879 -57093674 - MLT1D LTR MaLR -342 163 111 1885 120 97 3 chr17 32410879 32411187 -57093366 + MER1B DNA MER1_type 1 337 0 1283 220 130 75 chr17 32411187 32411242 -57093311 - MLT1D LTR MaLR -394 111 3 258 268 61 24 chr17 32411287 32411369 -57093184 - L2 LINE L2 -35 3237 3153 217 208 65 78 chr17 32411454 32411531 -57093022 - MIR SINE MIR -21 241 166 191 234 64 0 chr17 32411826 32411873 -57092680 - L2 LINE L2 -563 2751 2702 246 286 66 0 chr17 32413071 32413162 -57091391 - MIR SINE MIR -91 171 75 213 316 52 74 chr17 32413588 32413898 -57090655 - L2 LINE L2 -61 3211 2909 359 189 81 45 chr17 32414330 32414441 -57090112 + MIR SINE MIR 16 130 -132 337 293 119 81 chr17 32416235 32416754 -57087799 - L3 LINE CR1 -175 1402 864 275 185 0 15 chr17 32416936 32417001 -57087552 - L1ME4a LINE L1 -179 5942 5879 265 291 54 14 chr17 32417052 32417200 -57087353 - L1MC4a LINE L1 -158 7650 7497 468 295 108 21 chr17 32417242 32417483 -57087070 - L3 LINE CR1 -711 866 605 21 0 0 0 chr17 32417613 32417634 -57086919 + GC_rich Low_complexity Low_complexity 1 21 0 3184 189 20 20 chr17 32417862 32418502 -57086051 + L1MC3 LINE L1 6980 7619 -166 1995 141 0 6 chr17 32418582 32418894 -57085659 + AluJb SINE Alu 1 310 -2 630 252 7 0 chr17 32419045 32419180 -57085373 + MIR SINE MIR 103 238 -24 986 169 6 0 chr17 32420552 32420724 -57083829 - FRAM SINE Alu -11 165 1 1853 106 42 7 chr17 32420734 32421017 -57083536 - AluSx SINE Alu -19 293 1 2187 100 0 7 chr17 32422108 32422408 -57082145 + AluSx SINE Alu 1 298 -14 2226 92 3 0 chr17 32422441 32422736 -57081817 + AluSx SINE Alu 1 296 -16 607 297 158 12 chr17 32422741 32423346 -57081207 - L2 LINE L2 -5 3308 2535 2190 83 0 13 chr17 32423665 32423967 -57080586 + AluY SINE Alu 1 298 -13 347 239 80 26 chr17 32424501 32424614 -57079939 - L3 LINE CR1 -130 1447 1329 207 216 0 48 chr17 32424665 32424790 -57079763 + (TCCA)n Simple_repeat Simple_repeat 4 122 0 368 71 18 0 chr17 32424854 32424910 -57079643 + (TCCA)n Simple_repeat Simple_repeat 3 59 0 2245 63 0 14 chr17 32425258 32425602 -57078951 - AluY SINE Alu 0 340 1 266 281 73 0 chr17 32425634 32425716 -57078837 + MIR SINE MIR 114 201 -61 2259 94 0 7 chr17 32425989 32426298 -57078255 - AluSc SINE Alu -2 307 1 347 219 68 3 chr17 32426342 32426442 -57078111 - MIR SINE MIR -86 122 17 706 210 21 7 chr17 32427063 32427206 -57077347 + MIR SINE MIR 13 157 -105 2080 75 0 11 chr17 32428050 32428316 -57076237 - AluSx SINE Alu -17 295 33 294 279 48 36 chr17 32429186 32429437 -57075116 - L1MC/D LINE L1 -2474 5915 5662 312 242 115 76 chr17 32429446 32429603 -57074950 - L1MC/D LINE L1 -4028 2512 2350 2055 129 23 13 chr17 32429716 32430025 -57074528 - AluJo SINE Alu 0 312 1 1578 254 98 12 chr17 32430238 32430797 -57073756 - L1MC4 LINE L1 -446 7596 6990 523 315 24 40 chr17 32431085 32431336 -57073217 - L1M4 LINE L1 -1718 4428 4182 388 321 32 83 chr17 32431811 32432088 -57072465 - L1M4 LINE L1 -2030 4116 3854 366 242 139 30 chr17 32432093 32432258 -57072295 - MLT1K LTR MaLR -399 189 7 319 378 79 4 chr17 32432607 32432848 -57071705 + MIR SINE MIR 2 260 -2 201 39 0 0 chr17 32432997 32433023 -57071530 + (ATG)n Simple_repeat Simple_repeat 3 28 0 1322 110 5 26 chr17 32433108 32433299 -57071254 + AluSx SINE Alu 1 187 -125 2320 78 0 3 chr17 32433758 32434069 -57070484 + AluY SINE Alu 1 310 0 256 304 0 0 chr17 32435185 32435254 -57069299 + MIR SINE MIR 85 153 -109 234 283 0 0 chr17 32435524 32435584 -57068969 - MIR SINE MIR -96 166 107 322 261 8 41 chr17 32436747 32436877 -57067676 - MIR SINE MIR -59 149 27 397 338 20 0 chr17 32437503 32437651 -57066902 - MLT1L LTR MaLR -22 593 443 549 270 26 0 chr17 32437744 32437896 -57066657 - MLT1L LTR MaLR -340 275 120 213 187 27 80 chr17 32438018 32438093 -57066460 - MIR SINE MIR -109 153 83 459 255 7 40 chr17 32438258 32438407 -57066146 - MIR3 SINE MIR -10 198 55 302 231 56 13 chr17 32438637 32438745 -57065808 - MIR SINE MIR -69 139 75 241 220 305 1 chr17 32438762 32438857 -57065696 + MER45 DNA AcHobo 1 125 -62 469 227 36 0 chr17 32440383 32440493 -57064060 - Charlie8 DNA MER1_type -2174 243 130 1806 157 38 3 chr17 32440494 32440781 -57063772 + AluJb SINE Alu 1 297 -15 2410 80 0 0 chr17 32440783 32441098 -57063455 + AluSq SINE Alu 1 315 0 2177 128 0 13 chr17 32441141 32441447 -57063106 - AluJb SINE Alu -10 302 1 705 238 210 25 chr17 32441489 32441916 -57062637 - L1ME1 LINE L1 -17 6543 6040 2346 221 37 83 chr17 32441923 32442221 -57062332 - L1ME1 LINE L1 -2155 4385 4075 2680 59 0 0 chr17 32442221 32442528 -57062025 - AluY SINE Alu -3 308 2 2346 221 37 83 chr17 32442528 32442914 -57061639 - L1ME1 LINE L1 -2465 4075 3673 1915 154 3 10 chr17 32442914 32443212 -57061341 - AluJo SINE Alu -16 296 1 2346 221 37 83 chr17 32443212 32443481 -57061072 - L1ME1 LINE L1 -2867 3673 3393 2248 96 3 3 chr17 32443481 32443783 -57060770 + AluSp SINE Alu 1 302 0 2346 221 37 83 chr17 32443783 32443863 -57060690 - L1ME1 LINE L1 -3147 3393 3311 1967 149 10 16 chr17 32443863 32443896 -57060657 - AluSx SINE Alu -1 311 279 186 43 0 0 chr17 32443896 32443919 -57060634 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1967 149 10 16 chr17 32443919 32444194 -57060359 - AluSx SINE Alu -33 279 5 2346 221 37 83 chr17 32444194 32444235 -57060318 - L1ME1 LINE L1 -3229 3311 3270 2346 95 0 13 chr17 32444235 32444539 -57060014 - AluSq SINE Alu -12 301 2 2346 221 37 83 chr17 32444539 32444578 -57059975 - L1ME1 LINE L1 -3270 3270 3231 1842 141 25 7 chr17 32444578 32444854 -57059699 + AluJo SINE Alu 2 282 -30 2346 221 37 83 chr17 32444854 32445303 -57059250 - L1ME1 LINE L1 -3309 3231 2757 920 243 54 59 chr17 32445297 32445597 -57058956 - L1ME1 LINE L1 -5096 1447 1148 * 2562 63 0 0 chr17 32445597 32445898 -57058655 - AluY SINE Alu -10 301 1 920 243 54 59 chr17 32445898 32446021 -57058532 - L1ME1 LINE L1 -5395 1148 1026 866 209 11 23 chr17 32446033 32446210 -57058343 - FRAM SINE Alu 0 40 1 347 258 11 21 chr17 32446235 32446328 -57058225 - L1ME1 LINE L1 -5541 1002 911 311 289 64 39 chr17 32446377 32446533 -57058020 - L1ME1 LINE L1 -5595 935 776 385 341 91 19 chr17 32446717 32447025 -57057528 - L1ME1 LINE L1 -6210 330 1 827 95 24 40 chr17 32447148 32447256 -57057297 - AluSc SINE Alu -71 238 131 2395 97 0 3 chr17 32447256 32447555 -57056998 - AluSx SINE Alu -14 298 1 827 95 24 40 chr17 32447555 32447572 -57056981 - AluSc SINE Alu -178 131 115 937 252 45 8 chr17 32447727 32447969 -57056584 + MIR SINE MIR 12 262 0 212 229 29 14 chr17 32448603 32448673 -57055880 + MIR SINE MIR 78 148 -60 22 0 0 0 chr17 32448943 32448965 -57055588 + AT_rich Low_complexity Low_complexity 1 22 0 467 215 39 15 chr17 32448984 32449114 -57055439 + MIR SINE MIR 74 206 -56 2321 99 0 16 chr17 32449266 32449579 -57054974 - AluSc SINE Alu -1 308 1 2299 112 0 6 chr17 32449628 32449940 -57054613 - AluSx SINE Alu -2 310 1 199 314 0 0 chr17 32451324 32451375 -57053178 + L2 LINE L2 3250 3300 -13 207 100 0 0 chr17 32451375 32451405 -57053148 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 990 148 13 13 chr17 32451476 32451631 -57052922 + FRAM SINE Alu 1 154 -22 180 0 0 0 chr17 32451643 32451663 -57052890 + (ATG)n Simple_repeat Simple_repeat 2 21 0 608 146 19 0 chr17 32451665 32451768 -57052785 - AluSp/q SINE Alu -21 292 188 501 226 30 15 chr17 32451798 32451931 -57052622 - L2 LINE L2 -12 3301 3167 2385 91 0 7 chr17 32452224 32452533 -57052020 + AluSx SINE Alu 1 307 -5 631 249 36 71 chr17 32452741 32453032 -57051521 - L2 LINE L2 -246 3067 2708 2583 59 0 7 chr17 32453032 32453338 -57051215 - AluY SINE Alu -7 304 1 631 249 36 71 chr17 32453338 32453464 -57051089 - L2 LINE L2 -605 2708 2579 327 267 19 9 chr17 32453763 32453868 -57050685 + L1ME LINE L1 5714 5819 -302 287 252 135 45 chr17 32453998 32454109 -57050444 - L1ME3A LINE L1 -6 6164 6044 254 241 0 76 chr17 32454898 32454977 -57049576 + MER81 DNA DNA 38 110 -4 1960 148 0 13 chr17 32455036 32455339 -57049214 - AluJb SINE Alu -13 299 1 1922 132 0 69 chr17 32455521 32455839 -57048714 + AluJb SINE Alu 1 296 -16 1032 265 168 34 chr17 32457162 32457584 -57046969 - MER21B LTR ERV1 -99 764 249 1712 171 3 17 chr17 32457584 32457876 -57046677 + AluJo SINE Alu 1 288 -24 1032 265 168 34 chr17 32457876 32458007 -57046546 - MER21B LTR ERV1 -614 249 137 251 246 55 57 chr17 32458763 32458943 -57045610 + MIR SINE MIR 12 192 -62 2231 65 0 14 chr17 32459446 32459723 -57044830 - AluY SINE Alu 0 311 39 284 342 61 56 chr17 32461317 32461503 -57043050 + L2 LINE L2 2826 3015 -257 889 118 0 0 chr17 32461503 32461630 -57042923 + FLAM_C SINE Alu 2 128 -5 284 342 61 56 chr17 32461630 32461674 -57042879 + L2 LINE L2 3015 3057 -215 636 297 73 49 chr17 32461881 32462277 -57042276 - L1ME3A LINE L1 -750 5396 5011 1807 157 20 0 chr17 32462277 32462452 -57042101 - AluSx SINE Alu -4 308 123 246 32 0 0 chr17 32462452 32462483 -57042070 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1807 157 20 0 chr17 32462483 32462601 -57041952 - AluSx SINE Alu -189 123 9 636 297 73 49 chr17 32462601 32463159 -57041394 - L1ME3A LINE L1 -1135 5011 4670 2320 125 0 0 chr17 32463159 32463471 -57041082 + AluSx SINE Alu 1 312 0 636 297 73 49 chr17 32463471 32463659 -57040894 - L1ME3A LINE L1 -1476 4670 4488 2258 111 0 13 chr17 32463682 32463998 -57040555 - AluSq SINE Alu -1 312 1 2221 117 0 0 chr17 32464191 32464500 -57040053 - AluSq SINE Alu 0 309 1 2567 54 0 3 chr17 32464676 32464971 -57039582 - AluY SINE Alu -17 294 1 1167 184 23 9 chr17 32465083 32465301 -57039252 + MER58A DNA MER1_type 1 221 -3 2504 89 0 0 chr17 32465350 32465653 -57038900 + AluSx SINE Alu 1 303 -9 343 296 201 0 chr17 32466020 32466199 -57038354 - L1M4 LINE L1 -989 5157 4943 1990 149 0 16 chr17 32466302 32466610 -57037943 + AluSx SINE Alu 2 304 -8 359 278 19 19 chr17 32467426 32467588 -57036965 + LTR37B LTR ERV1 226 387 -81 1231 204 60 110 chr17 32467878 32468207 -57036346 - L1MC4 LINE L1 0 8042 7698 333 0 0 0 chr17 32468207 32468244 -57036309 + (TA)n Simple_repeat Simple_repeat 1 37 0 2513 65 0 16 chr17 32468244 32468550 -57036003 - AluSg SINE Alu -9 301 1 1231 204 60 110 chr17 32468550 32468782 -57035771 - L1MC4 LINE L1 -342 7700 7508 24 0 0 0 chr17 32468816 32468840 -57035713 + AT_rich Low_complexity Low_complexity 1 24 0 1596 163 7 31 chr17 32469549 32469667 -57034886 + AluJb SINE Alu 21 140 -172 2421 46 0 7 chr17 32469667 32469975 -57034578 + AluY SINE Alu 4 309 0 1596 163 7 31 chr17 32469975 32470149 -57034404 + AluJb SINE Alu 140 307 -5 2193 109 3 0 chr17 32470167 32470484 -57034069 - AluSx SINE Alu 0 318 1 1892 145 32 0 chr17 32470490 32470772 -57033781 - AluJb SINE Alu -20 292 2 1587 181 50 20 chr17 32470894 32471193 -57033360 - AluJo SINE Alu -4 308 1 358 317 67 22 chr17 32471476 32471656 -57032897 + MIR SINE MIR 20 207 -55 1492 156 9 103 chr17 32472212 32472532 -57032021 - AluJo SINE Alu -22 290 1 1236 171 94 14 chr17 32472585 32472860 -57031693 - L1MA5A LINE L1 -44 6253 5957 873 295 105 47 chr17 32472926 32472983 -57031570 + L2 LINE L2 2045 2097 -1216 1777 100 4 8 chr17 32472983 32473264 -57031289 - AluSx SINE Alu 0 323 44 873 295 105 47 chr17 32473264 32473839 -57030714 + L2 LINE L2 2097 2637 -676 2531 82 0 0 chr17 32473839 32474143 -57030410 + AluSx SINE Alu 1 304 -8 873 295 105 47 chr17 32474143 32474556 -57029997 + L2 LINE L2 2637 3172 -141 1239 147 57 0 chr17 32474556 32474801 -57029752 - L1MA4 LINE L1 -3 6297 6039 873 295 105 47 chr17 32474801 32474940 -57029613 + L2 LINE L2 3172 3302 -11 2143 133 0 16 chr17 32475730 32476046 -57028507 + AluJo SINE Alu 1 311 -1 513 322 6 17 chr17 32476065 32476242 -57028311 + MIR SINE MIR 31 205 -57 1612 104 133 0 chr17 32476243 32476484 -57028069 + AluSx SINE Alu 40 312 0 2281 122 0 0 chr17 32476940 32477235 -57027318 - AluSx SINE Alu -17 295 1 2164 120 0 3 chr17 32477263 32477555 -57026998 + AluSx SINE Alu 1 291 -21 812 254 92 55 chr17 32477682 32478205 -57026348 - MER34 LTR ERV1 0 542 1 1686 138 48 0 chr17 32478890 32479159 -57025394 - AluJb SINE Alu -20 292 11 870 200 68 89 chr17 32479452 32479822 -57024731 - MER92B LTR ERV1 -4 632 271 207 250 0 0 chr17 32480212 32480260 -57024293 + G-rich Low_complexity Low_complexity 3 50 0 318 257 23 35 chr17 32480402 32480573 -57023980 + (TCTCTG)n Simple_repeat Simple_repeat 5 173 0 324 289 41 25 chr17 32480702 32480823 -57023730 - MIR SINE MIR -83 179 57 256 340 57 7 chr17 32481253 32481394 -57023159 + MER103 DNA DNA 18 165 -1 292 241 218 0 chr17 32481632 32481719 -57022834 - MER91C DNA MER1_type -34 106 1 288 223 65 115 chr17 32481913 32482052 -57022501 + MIR SINE MIR 47 178 -84 207 0 0 0 chr17 32482146 32482169 -57022384 + (TTA)n Simple_repeat Simple_repeat 2 24 0 430 243 71 30 chr17 32482991 32483160 -57021393 + MIR SINE MIR 21 196 -66 1019 167 6 0 chr17 32483405 32483573 -57020980 - AluJo SINE Alu -23 289 121 332 289 19 0 chr17 32484076 32484180 -57020373 + MER103 DNA DNA 36 141 -25 532 176 0 0 chr17 32484299 32484384 -57020169 - AluS SINE Alu -227 86 2 574 82 0 0 chr17 32484385 32484458 -57020095 - AluJ/FRAM SINE Alu -16 296 224 204 214 162 68 chr17 32484458 32484575 -57019978 + MER5A DNA MER1_type 61 188 -1 778 178 13 26 chr17 32484595 32484643 -57019910 - MER5B DNA MER1_type -12 166 119 2216 109 0 13 chr17 32484643 32484956 -57019597 + AluSx SINE Alu 1 309 -3 778 178 13 26 chr17 32484956 32485059 -57019494 - MER5B DNA MER1_type -59 119 17 276 290 9 48 chr17 32485149 32485265 -57019288 - MIR SINE MIR -86 122 11 2240 107 3 0 chr17 32485289 32485599 -57018954 - AluSx SINE Alu -1 311 1 520 308 72 21 chr17 32485847 32486084 -57018469 + MIR SINE MIR 8 256 -6 1789 69 4 4 chr17 32486233 32486465 -57018088 - AluSq SINE Alu -79 234 3 2021 135 3 3 chr17 32486471 32486783 -57017770 - AluSx SINE Alu 0 312 1 2231 109 3 0 chr17 32487109 32487420 -57017133 - AluSq SINE Alu -1 312 1 2039 139 7 0 chr17 32487421 32487731 -57016822 - AluJb SINE Alu 0 312 1 282 289 141 21 chr17 32487765 32487907 -57016646 - MIR3 SINE MIR -40 168 10 224 259 161 0 chr17 32487957 32488038 -57016515 - MER5A DNA MER1_type -46 143 50 186 43 0 0 chr17 32488184 32488207 -57016346 + (A)n Simple_repeat Simple_repeat 1 23 0 1855 145 29 10 chr17 32488218 32488529 -57016024 + 7SLRNA srpRNA srpRNA 1 317 -3 2147 81 0 42 chr17 32488529 32488837 -57015716 + AluSc SINE Alu 1 296 -13 688 278 90 4 chr17 32488924 32489158 -57015395 + MIR SINE MIR 1 254 -8 202 303 37 46 chr17 32489141 32489250 -57015303 - MIR SINE MIR -94 168 61 * 2031 94 3 24 chr17 32489776 32490105 -57014448 - AluSx SINE Alu 0 323 1 367 260 136 2 chr17 32491043 32491155 -57013398 + MIR SINE MIR 37 153 -60 513 170 114 54 chr17 32491164 32491235 -57013318 - MER69 DNA AcHobo -4 2522 2457 2239 91 0 3 chr17 32491235 32491531 -57013022 + AluSc SINE Alu 1 295 -14 513 170 114 54 chr17 32491531 32491648 -57012905 - MER69 DNA AcHobo -69 2457 8 411 226 59 10 chr17 32491659 32491761 -57012792 + MIR SINE MIR 156 262 0 223 306 56 0 chr17 32491859 32491931 -57012622 - L2 LINE L2 0 3272 3197 1773 129 33 40 chr17 32492035 32492337 -57012216 + AluJb SINE Alu 1 300 -12 237 344 53 38 chr17 32492543 32492674 -57011879 - MIR3 SINE MIR -41 167 35 395 253 62 34 chr17 32493332 32493478 -57011075 - MIR SINE MIR -19 243 94 1743 172 7 7 chr17 32493755 32494051 -57010502 - AluJb SINE Alu -16 296 1 442 257 135 0 chr17 32494150 32494298 -57010255 - MIR SINE MIR -48 214 47 2215 81 7 3 chr17 32494568 32494864 -57009689 + AluSq SINE Alu 1 297 -16 290 280 121 38 chr17 32495194 32495433 -57009120 - L2 LINE L2 -59 3254 2996 2237 105 3 0 chr17 32495437 32495742 -57008811 + AluSx SINE Alu 1 306 -6 324 301 103 0 chr17 32495879 32495944 -57008609 - L2 LINE L2 -560 2754 2697 1827 142 7 0 chr17 32495944 32496232 -57008321 + AluJo SINE Alu 1 290 -22 324 301 103 0 chr17 32496232 32496312 -57008241 - L2 LINE L2 -617 2697 2594 852 276 47 0 chr17 32496604 32496861 -57007692 + LTR16A LTR ERVL 129 397 -53 294 254 26 53 chr17 32496864 32496978 -57007575 - L2 LINE L2 -1018 2296 2186 2062 126 10 0 chr17 32497073 32497374 -57007179 + AluSx SINE Alu 1 304 -8 944 98 0 15 chr17 32497394 32497566 -57006987 + AluSg/x SINE Alu 152 321 0 318 254 206 5 chr17 32497703 32497892 -57006661 - L2 LINE L2 -1645 1669 1443 201 266 107 112 chr17 32498143 32498207 -57006346 - MIR SINE MIR -49 213 150 3540 183 42 22 chr17 32498207 32498847 -57005706 - MER82 DNA MER2_type 0 653 1 2318 103 0 0 chr17 32498850 32499162 -57005391 - AluSx SINE Alu 0 312 1 201 266 107 112 chr17 32499162 32499262 -57005291 - MIR SINE MIR -114 148 46 1122 155 82 5 chr17 32500432 32500651 -57003902 + MIR SINE MIR 6 241 -21 2270 88 14 0 chr17 32500674 32500971 -57003582 - AluSx SINE Alu -11 301 1 277 257 229 0 chr17 32501742 32501851 -57002702 + MIR SINE MIR 102 235 -27 263 304 43 17 chr17 32502329 32502444 -57002109 - L2 LINE L2 -213 3059 2942 290 248 248 0 chr17 32502494 32502607 -57001946 + MIR3 SINE MIR 67 207 -1 382 264 124 3 chr17 32502695 32502853 -57001700 - MIR SINE MIR -58 150 3 2231 79 9 22 chr17 32503186 32503502 -57001051 + AluSx SINE Alu 1 312 0 450 232 109 62 chr17 32503531 32503742 -57000811 + L2 LINE L2 3091 3311 -2 285 131 0 0 chr17 32503743 32503804 -57000749 + (TGAA)n Simple_repeat Simple_repeat 1 61 0 378 263 42 111 chr17 32503872 32504062 -57000491 - MER5B DNA MER1_type -1 177 1 208 323 50 0 chr17 32504722 32504821 -56999732 - MIR3 SINE MIR -12 196 93 1979 131 26 3 chr17 32504989 32505294 -56999259 + AluSx SINE Alu 1 312 0 2327 94 0 0 chr17 32505591 32505899 -56998654 + AluSg SINE Alu 1 308 -2 361 270 16 48 chr17 32506008 32506134 -56998419 + MIR SINE MIR 22 143 -65 900 167 0 42 chr17 32506606 32506743 -56997810 + FRAM SINE Alu 1 131 -181 2213 105 7 0 chr17 32506743 32507049 -56997504 - AluSx SINE Alu -4 308 1 900 167 0 42 chr17 32507049 32507079 -56997474 + FRAM SINE Alu 131 161 -15 749 312 57 0 chr17 32507451 32507698 -56996855 - MIR SINE MIR 0 262 2 348 317 156 27 chr17 32507725 32507949 -56996604 - MIR SINE MIR -2 260 8 357 243 147 15 chr17 32508443 32508579 -56995974 - MIR SINE MIR -84 178 25 2080 96 0 0 chr17 32508632 32508903 -56995650 + AluSg SINE Alu 1 271 -39 204 40 0 0 chr17 32508914 32508939 -56995614 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1188 132 28 38 chr17 32508939 32509151 -56995402 - AluJo SINE Alu -30 282 73 499 262 0 10 chr17 32509152 32509255 -56995298 - AluJo/FLAM SINE Alu -209 103 2 246 160 0 0 chr17 32509634 32509684 -56994869 + (TG)n Simple_repeat Simple_repeat 2 51 0 579 104 179 0 chr17 32509972 32510078 -56994475 - FLAM_C SINE Alu -17 126 2 182 37 37 0 chr17 32510631 32510658 -56993895 + (CCCCCG)n Simple_repeat Simple_repeat 3 30 0 22 0 0 0 chr17 32510759 32510781 -56993772 + GC_rich Low_complexity Low_complexity 1 22 0 25 95 0 0 chr17 32510949 32511023 -56993530 + GC_rich Low_complexity Low_complexity 1 74 0 1628 154 20 33 chr17 32513223 32513529 -56991024 - AluJb SINE Alu -10 302 1 651 270 255 27 chr17 32513958 32514362 -56990191 - L2 LINE L2 -4 3309 2814 302 289 21 31 chr17 32516341 32516438 -56988115 + MIR SINE MIR 34 129 -79 739 214 0 31 chr17 32516852 32517011 -56987542 + MIR SINE MIR 31 184 -78 329 219 0 14 chr17 32517016 32517089 -56987464 + MIR SINE MIR 153 224 -38 798 161 0 56 chr17 32517305 32517448 -56987105 - AluSq/x SINE Alu -176 136 2 1682 173 44 0 chr17 32518039 32518334 -56986219 - AluJo SINE Alu -4 308 1 343 277 88 0 chr17 32518629 32518766 -56985787 + MER104 DNA Tc2 29 177 -3 271 294 0 35 chr17 32518896 32518981 -56985572 + MIR SINE MIR 49 130 -132 228 275 184 18 chr17 32519580 32519689 -56984864 + MIR SINE MIR 34 160 -102 185 239 0 65 chr17 32519675 32519721 -56984832 + L2 LINE L2 3218 3260 -12 * 2217 99 0 0 chr17 32519754 32520057 -56984496 + AluSx SINE Alu 1 303 -9 2165 119 0 3 chr17 32522017 32522327 -56982226 - AluSc SINE Alu 0 309 1 2457 67 0 0 chr17 32523415 32523713 -56980840 + AluSc SINE Alu 1 298 -11 1965 131 28 103 chr17 32523935 32524165 -56980388 - MER47A DNA MER2_type -1957 366 120 2074 70 70 0 chr17 32524165 32524184 -56980369 - AluY SINE Alu -4 307 291 207 69 0 0 chr17 32524184 32524213 -56980340 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 2074 70 70 0 chr17 32524213 32524480 -56980073 - AluY SINE Alu -20 291 1 1965 131 28 103 chr17 32524480 32524608 -56979945 - MER47A DNA MER2_type -2203 120 38 1838 142 0 26 chr17 32524608 32524910 -56979643 + AluSx SINE Alu 3 296 -16 1965 131 28 103 chr17 32524910 32524946 -56979607 - MER47A DNA MER2_type -2285 38 1 2180 120 0 0 chr17 32524969 32525269 -56979284 + AluSx SINE Alu 1 300 -12 2252 117 29 81 chr17 32525407 32525689 -56978864 - MLT1B LTR MaLR -2 388 131 2148 99 0 0 chr17 32525689 32525992 -56978561 - AluSx SINE Alu 0 316 14 2252 117 29 81 chr17 32525992 32526117 -56978436 - MLT1B LTR MaLR -259 131 1 1098 130 5 14 chr17 32526522 32526730 -56977823 + L1M1 LINE L1 5289 5494 -811 2244 86 0 3 chr17 32526802 32527103 -56977450 - AluY SINE Alu -11 300 1 950 90 0 15 chr17 32527107 32527240 -56977313 - AluSg SINE Alu -179 131 1 246 248 86 71 chr17 32527310 32527520 -56977033 - L1MC5 LINE L1 -248 7713 7501 439 226 11 0 chr17 32527523 32527616 -56976937 + MER5A DNA MER1_type 1 94 -95 364 327 148 25 chr17 32527956 32528234 -56976319 - L1M4 LINE L1 -3465 2681 2370 * 381 325 79 32 chr17 32528143 32528395 -56976158 + L1MCa LINE L1 1906 2169 -4257 1208 142 119 51 chr17 32528409 32528662 -56975891 - AluJo SINE Alu -31 281 12 289 246 71 0 chr17 32528784 32528910 -56975643 - L1M4 LINE L1 -3891 2255 2121 5613 128 20 21 chr17 32528931 32529672 -56974881 - L1MA6 LINE L1 -5 6295 5554 2250 95 0 3 chr17 32529672 32529967 -56974586 + AluSg SINE Alu 3 296 -14 5613 128 20 21 chr17 32529967 32530267 -56974286 - L1MA6 LINE L1 -746 5554 5255 678 256 0 0 chr17 32530331 32530464 -56974089 - FLAM_A SINE Alu 0 133 1 249 33 0 0 chr17 32530483 32530513 -56974040 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 1778 138 35 7 chr17 32530518 32530800 -56973753 - AluJb SINE Alu -22 290 1 402 186 0 0 chr17 32531834 32531904 -56972649 + AluJ SINE Alu 68 137 -175 719 165 0 9 chr17 32533550 32533665 -56970888 + AluJ SINE Alu 140 253 -59 228 22 43 43 chr17 32533671 32533717 -56970836 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 492 252 157 52 chr17 32533718 32533928 -56970625 - MIR SINE MIR -14 248 17 230 397 26 9 chr17 32534040 32534156 -56970397 - MIR3 SINE MIR -87 121 4 425 267 47 33 chr17 32534958 32535108 -56969445 - MIR SINE MIR -96 166 15 225 0 0 0 chr17 32537672 32537697 -56966856 + (CCCTG)n Simple_repeat Simple_repeat 2 26 0 445 335 78 0 chr17 32537697 32537864 -56966689 + MIR SINE MIR 77 256 -6 390 313 127 0 chr17 32538729 32538879 -56965674 - MIR SINE MIR -13 249 81 4017 82 35 105 chr17 32539046 32539140 -56965413 - MER51A LTR ERV1 -2 632 533 2143 92 7 0 chr17 32539140 32539434 -56965119 - AluY SINE Alu -10 301 6 4017 82 35 105 chr17 32539434 32540018 -56964535 - MER51A LTR ERV1 -101 533 1 386 344 162 20 chr17 32540533 32540780 -56963773 + L1ME4a LINE L1 5562 5843 -278 1090 149 6 0 chr17 32540882 32541050 -56963503 + AluJ SINE Alu 135 303 -9 332 318 83 8 chr17 32541052 32541104 -56963449 + L1ME4a LINE L1 5885 5932 -189 2207 127 3 0 chr17 32541104 32541420 -56963133 + 7SLRNA srpRNA srpRNA 1 317 -3 332 318 83 8 chr17 32541420 32541499 -56963054 + L1ME4a LINE L1 5932 6026 -95 1251 109 0 0 chr17 32541501 32541675 -56962878 - AluSc SINE Alu -7 302 129 2518 71 0 0 chr17 32541675 32541986 -56962567 - AluY SINE Alu 0 311 1 345 203 27 0 chr17 32542323 32542397 -56962156 + MER116 DNA Mariner 4 79 -1 1562 126 74 4 chr17 32542524 32542793 -56961760 + AluSx SINE Alu 22 309 -3 1233 151 10 0 chr17 32542799 32543005 -56961548 - MER2 DNA MER2_type -135 210 3 308 111 79 0 chr17 32543090 32543153 -56961400 - MER41B LTR ERV1 -86 549 482 2414 62 3 0 chr17 32543168 32543475 -56961078 - AluY SINE Alu 0 311 4 325 331 45 90 chr17 32543485 32543730 -56960823 - L1ME4a LINE L1 -281 5840 5607 227 176 137 0 chr17 32547954 32548005 -56956548 - MIR SINE MIR -88 174 117 2062 75 82 0 chr17 32549336 32549615 -56954938 + AluSc SINE Alu 1 302 -7 1872 136 27 7 chr17 32549990 32550291 -56954262 + AluSx SINE Alu 1 307 -5 324 160 40 40 chr17 32550717 32550792 -56953761 + L1ME4a LINE L1 6046 6120 -1 1042 171 6 0 chr17 32551763 32551938 -56952615 - AluJo/FRAM SINE Alu -4 308 133 1607 166 20 33 chr17 32551939 32552240 -56952313 - AluJo SINE Alu -15 297 1 296 267 0 58 chr17 32554004 32554090 -56950463 + MER5B DNA MER1_type 45 125 -53 405 189 63 0 chr17 32556850 32556945 -56947608 - MER53 DNA DNA 0 189 89 1792 154 25 7 chr17 32556949 32557235 -56947318 - AluJo SINE Alu -21 291 1 422 260 39 8 chr17 32557239 32557366 -56947187 - MER5B DNA MER1_type -22 156 26 864 132 7 21 chr17 32557810 32557954 -56946599 + FLAM_C SINE Alu 1 142 -1 788 189 24 12 chr17 32557982 32558151 -56946402 - MER5B DNA MER1_type 0 178 8 917 111 0 42 chr17 32558885 32559029 -56945524 + AluSq/x SINE Alu 1 138 -175 2223 123 0 0 chr17 32561588 32561898 -56942655 - AluSx SINE Alu -2 310 1 357 150 0 0 chr17 32561943 32562003 -56942550 + MER53 DNA DNA 2 61 -128 473 137 63 40 chr17 32562008 32562146 -56942407 - MLT1C LTR MaLR -262 128 1 245 306 117 68 chr17 32562485 32562750 -56941803 - L2 LINE L2 -18 3254 2977 383 256 109 29 chr17 32562965 32563102 -56941451 + MER5B DNA MER1_type 28 175 -3 206 263 79 35 chr17 32563123 32563237 -56941316 - L2 LINE L2 -266 3047 2929 1176 232 52 7 chr17 32563385 32563695 -56940858 - MLT1B LTR MaLR -8 382 59 587 238 199 0 chr17 32564106 32564287 -56940266 - MIR SINE MIR -12 250 34 370 224 58 129 chr17 32565392 32565515 -56939038 + MLT1H1 LTR MaLR 33 163 -392 1957 104 58 4 chr17 32565515 32565793 -56938760 - AluSq SINE Alu -20 293 1 370 224 58 129 chr17 32565793 32566087 -56938466 + MLT1H1 LTR MaLR 163 555 0 2241 107 0 0 chr17 32566199 32566507 -56938046 + AluSc SINE Alu 1 308 -1 194 185 56 56 chr17 32566742 32566796 -56937757 - MIR SINE MIR -55 153 100 792 241 103 53 chr17 32566913 32567395 -56937158 - MLT1H LTR MaLR 0 549 1 2024 111 3 3 chr17 32567396 32567685 -56936868 - AluSx SINE Alu -22 290 2 2515 62 0 0 chr17 32567711 32568020 -56936533 + AluY SINE Alu 1 309 -2 2166 91 0 30 chr17 32568040 32568337 -56936216 + AluSc SINE Alu 1 288 -21 764 230 120 23 chr17 32568343 32568560 -56935993 + L2 LINE L2 3076 3313 0 1730 129 0 0 chr17 32568777 32569025 -56935528 - AluSg SINE Alu -1 309 62 2060 127 3 3 chr17 32569067 32569359 -56935194 - AluSx SINE Alu -20 292 1 2196 140 42 100 chr17 32569359 32569830 -56934723 - L1MC1 LINE L1 0 6333 5897 2023 181 70 0 chr17 32569830 32570200 -56934353 - MSTD LTR MaLR 0 396 1 2196 140 42 100 chr17 32570200 32570277 -56934276 - L1MC1 LINE L1 -436 5897 5817 605 189 105 0 chr17 32570279 32570422 -56934131 - L1MC1 LINE L1 -2 6331 6174 1417 196 53 18 chr17 32570431 32570716 -56933837 - AluJo SINE Alu -17 295 1 1350 191 86 27 chr17 32570716 32571116 -56933437 - L1 LINE L1 -816 5330 4904 494 65 0 0 chr17 32571123 32571185 -56933368 - AluSg SINE Alu -247 62 1 2141 103 14 3 chr17 32571218 32571510 -56933043 + AluSq SINE Alu 1 295 -18 236 226 0 75 chr17 32572222 32572315 -56932238 + C-rich Low_complexity Low_complexity 4 89 0 207 229 0 72 chr17 32572603 32572686 -56931867 + G-rich Low_complexity Low_complexity 4 80 0 229 286 16 0 chr17 32572751 32572814 -56931739 + tRNA-Arg-AGG tRNA tRNA 5 68 -8 23 68 0 0 chr17 32573014 32573058 -56931495 + GC_rich Low_complexity Low_complexity 1 44 0 461 327 107 21 chr17 32573388 32573669 -56930884 - L3 LINE CR1 -356 1221 917 2576 32 0 10 chr17 32573999 32574309 -56930244 - AluY SINE Alu -4 307 1 933 148 0 0 chr17 32574408 32574543 -56930010 + AluJo SINE Alu 1 135 -177 1855 139 10 7 chr17 32574543 32574831 -56929722 + AluSx SINE Alu 2 290 -22 256 376 16 0 chr17 32575124 32575249 -56929304 + MIR3 SINE MIR 76 202 -6 2404 81 7 0 chr17 32575662 32575969 -56928584 - AluSq SINE Alu -4 309 1 555 294 9 35 chr17 32576265 32576496 -56928057 - L1MC5 LINE L1 -447 7514 7290 291 333 12 0 chr17 32576680 32576761 -56927792 - L2 LINE L2 -205 3067 2986 253 236 56 11 chr17 32577010 32577099 -56927454 - MIR3 SINE MIR -40 168 76 255 212 91 0 chr17 32577516 32577582 -56926971 - LTR16A LTR ERVL -346 104 33 214 371 10 23 chr17 32578109 32578285 -56926268 - MIR3 SINE MIR -2 206 30 1673 120 93 0 chr17 32578529 32578814 -56925739 + AluSx SINE Alu 1 309 0 327 287 148 36 chr17 32578863 32579086 -56925467 - MER112 DNA MER1_type -12 248 1 1885 145 0 43 chr17 32579132 32579457 -56925096 - AluJb SINE Alu -1 311 1 364 226 0 52 chr17 32579457 32579572 -56924981 + MER113 DNA MER1_type? 4 112 -409 1515 116 104 37 chr17 32580581 32580849 -56923704 - AluJo SINE Alu -26 286 1 29 90 0 0 chr17 32581473 32581551 -56923002 + GC_rich Low_complexity Low_complexity 1 78 0 23 0 0 0 chr17 32581829 32581852 -56922701 + GC_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr17 32582242 32582271 -56922282 + GC_rich Low_complexity Low_complexity 1 29 0 424 286 171 6 chr17 32585498 32585673 -56918880 + MIR SINE MIR 27 230 -32 24 53 0 0 chr17 32585714 32585752 -56918801 + AT_rich Low_complexity Low_complexity 1 38 0 2173 128 0 0 chr17 32585752 32586064 -56918489 - AluSx SINE Alu 0 312 1 291 140 0 0 chr17 32586066 32586116 -56918437 + (T)n Simple_repeat Simple_repeat 1 50 0 1739 148 50 3 chr17 32586116 32586414 -56918139 - AluSx SINE Alu 0 312 1 28 0 0 0 chr17 32586414 32586442 -56918111 + AT_rich Low_complexity Low_complexity 1 28 0 257 287 85 11 chr17 32586611 32586705 -56917848 + MIR SINE MIR 9 109 -153 200 169 62 77 chr17 32586805 32586870 -56917683 - L2 LINE L2 -35 3237 3174 261 301 139 54 chr17 32588277 32588443 -56916110 + MIR SINE MIR 56 235 -27 954 157 0 30 chr17 32588839 32588851 -56915702 + AluJo SINE Alu 122 133 -179 1562 184 10 16 chr17 32588851 32589155 -56915398 + AluJo SINE Alu 1 302 -10 954 157 0 30 chr17 32589155 32589308 -56915245 + AluJo SINE Alu 133 282 -30 2026 143 82 6 chr17 32590143 32590734 -56913819 - MER39 LTR ERV1 0 707 4 796 144 0 8 chr17 32591809 32591927 -56912626 - FLAM_C SINE Alu -25 118 2 941 230 127 3 chr17 32592646 32592937 -56911616 + MER46C DNA MER2_type 1 327 -11 383 269 8 50 chr17 32593188 32593248 -56911305 - MER58A DNA MER1_type -226 115 61 2164 125 0 10 chr17 32593248 32593560 -56910993 + AluSx SINE Alu 1 309 -3 383 269 8 50 chr17 32593560 32593618 -56910935 - MER58A DNA MER1_type -280 61 2 409 255 98 26 chr17 32594846 32594999 -56909554 - MER46C DNA MER2_type -174 164 1 258 295 208 7 chr17 32595461 32595610 -56908943 - MER5A DNA MER1_type 0 189 11 203 222 143 16 chr17 32595696 32595759 -56908794 - L2 LINE L2 -209 3063 2993 591 257 109 0 chr17 32595762 32595945 -56908608 - MIR SINE MIR 0 262 60 323 267 69 69 chr17 32596406 32596537 -56908016 - MIR SINE MIR -71 191 61 1474 144 0 0 chr17 32598636 32598858 -56905695 + AluSg/x SINE Alu 86 307 -5 2068 164 42 6 chr17 32599069 32599404 -56905149 + MER7A DNA MER2_type 1 345 -1 2121 104 3 22 chr17 32599464 32599780 -56904773 - AluSg SINE Alu 0 310 1 1952 134 3 7 chr17 32599803 32600108 -56904445 - AluSx SINE Alu -8 304 1 1939 155 0 3 chr17 32600809 32601112 -56903441 - AluJb SINE Alu -10 302 1 2205 93 0 26 chr17 32601161 32601474 -56903079 - AluY SINE Alu -6 305 1 304 292 139 15 chr17 32601525 32601584 -56902969 - L1ME4a LINE L1 -1 6120 6070 1702 164 0 3 chr17 32601584 32601894 -56902659 + AluJb SINE Alu 1 309 0 304 292 139 15 chr17 32601894 32601970 -56902583 - L1ME4a LINE L1 -51 6070 5967 389 259 23 38 chr17 32602263 32602394 -56902159 + MER5B DNA MER1_type 1 129 -49 1268 153 90 60 chr17 32602405 32602576 -56901977 - AluJo SINE Alu -2 310 125 2175 111 0 0 chr17 32602576 32602882 -56901671 - AluSx SINE Alu -4 308 3 1268 153 90 60 chr17 32602882 32603011 -56901542 - AluJo SINE Alu -187 125 1 285 287 66 25 chr17 32603215 32603337 -56901216 - MIR SINE MIR -62 146 20 241 250 44 0 chr17 32603581 32603649 -56900904 - MIR SINE MIR -113 149 79 987 260 80 31 chr17 32605262 32605555 -56898998 + MLT1K LTR MaLR 36 427 -161 2159 96 20 3 chr17 32605555 32605856 -56898697 + AluY SINE Alu 1 306 -5 987 260 80 31 chr17 32605856 32605967 -56898586 + MLT1K LTR MaLR 427 531 -57 1989 150 0 6 chr17 32606003 32606317 -56898236 - AluJo SINE Alu 0 312 1 225 158 0 0 chr17 32606318 32606356 -56898197 + MLT1K LTR MaLR 522 559 -29 1839 206 47 49 chr17 32606414 32606925 -56897628 - L1ME1 LINE L1 -5 6161 5652 355 253 42 0 chr17 32606927 32607022 -56897531 - MIR3 SINE MIR -48 160 62 353 249 181 35 chr17 32607165 32607373 -56897180 + MLT1K LTR MaLR 3 239 -349 375 23 0 0 chr17 32607773 32607817 -56896736 + (ATG)n Simple_repeat Simple_repeat 3 46 0 256 159 125 102 chr17 32607858 32607946 -56896607 - MIR3 SINE MIR -15 193 104 190 132 0 79 chr17 32608472 32608510 -56896043 - MIR SINE MIR -207 55 21 28 0 0 26 chr17 32608575 32608591 -56895962 + AT_rich Low_complexity Low_complexity 1 16 -22 2105 126 3 0 chr17 32608591 32608901 -56895652 - AluSx SINE Alu -1 311 1 28 0 0 26 chr17 32608901 32608923 -56895630 + AT_rich Low_complexity Low_complexity 16 38 0 264 108 0 0 chr17 32608926 32608963 -56895590 - FLAM SINE Alu -15 118 82 777 142 0 0 chr17 32608986 32609099 -56895454 - FLAM_C SINE Alu -25 118 6 189 303 32 103 chr17 32609311 32609466 -56895087 + MIR SINE MIR 59 202 -60 1046 291 80 54 chr17 32609540 32610025 -56894528 + MLT1K LTR MaLR 91 588 0 287 257 143 0 chr17 32610159 32610264 -56894289 + L2 LINE L2 3194 3313 0 199 274 39 0 chr17 32610865 32610916 -56893637 - MIR SINE MIR -65 143 91 275 260 190 40 chr17 32611209 32611409 -56893144 + MLT1K LTR MaLR 10 239 -349 2079 114 17 0 chr17 32611468 32611766 -56892787 + AluSq SINE Alu 1 303 -10 1178 209 0 4 chr17 32611948 32612178 -56892375 - MER46A DNA MER2_type 0 236 8 392 242 36 68 chr17 32612184 32612432 -56892121 - HAL1 LINE L1 -46 2461 2222 2175 95 0 7 chr17 32612493 32612789 -56891764 + AluSx SINE Alu 1 294 -18 1128 101 0 6 chr17 32612914 32613072 -56891481 - AluYa5 SINE Alu -10 301 145 1011 38 15 15 chr17 32613183 32613314 -56891239 - AluY SINE Alu -180 131 1 189 0 0 0 chr17 32613375 32613396 -56891157 + (ATTG)n Simple_repeat Simple_repeat 3 23 0 1665 156 30 0 chr17 32613396 32613665 -56890888 - AluJo SINE Alu -33 279 3 1473 167 110 3 chr17 32613678 32613960 -56890593 - AluJb SINE Alu 0 312 1 231 236 56 0 chr17 32614058 32614130 -56890423 + MLT1K LTR MaLR 513 588 0 489 242 65 8 chr17 32614202 32614326 -56890227 + MER45A DNA AcHobo 4 134 -44 266 228 158 44 chr17 32614597 32614711 -56889842 - MIR SINE MIR -112 150 24 339 309 59 7 chr17 32614735 32614871 -56889682 + MIR3 SINE MIR 37 179 -29 2150 243 70 43 chr17 32614871 32615092 -56889461 + L1MC5 LINE L1 7070 7284 -677 189 0 0 0 chr17 32615092 32615113 -56889440 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 423 0 0 0 chr17 32615112 32615159 -56889394 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 2150 243 70 43 chr17 32615113 32615345 -56889208 + L1MC5 LINE L1 7284 7508 -453 2352 86 0 0 chr17 32615345 32615647 -56888906 + AluSq SINE Alu 2 303 -10 2150 243 70 43 chr17 32615647 32615918 -56888635 + L1MC5 LINE L1 7508 7770 -191 2001 112 3 7 chr17 32615918 32616204 -56888349 + AluSx SINE Alu 1 285 -27 222 37 0 0 chr17 32616204 32616231 -56888322 + (CA)n Simple_repeat Simple_repeat 2 28 0 2150 243 70 43 chr17 32616231 32616369 -56888184 + L1MC5 LINE L1 7769 7911 -50 198 242 65 0 chr17 32616925 32616987 -56887566 + MIR SINE MIR 81 146 -62 363 200 39 12 chr17 32617048 32617141 -56887412 - MER20B DNA MER1_type -90 129 32 226 288 16 124 chr17 32617264 32617521 -56887032 - L2 LINE L2 -231 3041 2813 1893 110 0 0 chr17 32617527 32617817 -56886736 - AluSx SINE Alu 0 320 31 1418 167 49 19 chr17 32618056 32618343 -56886210 - AluJo SINE Alu 0 306 12 195 208 10 115 chr17 32618510 32618606 -56885947 - L2 LINE L2 -75 3238 3153 205 318 131 9 chr17 32620031 32620138 -56884415 - MIR SINE MIR -49 213 94 248 310 43 35 chr17 32620340 32620456 -56884097 + L2 LINE L2 3136 3252 -20 438 282 77 45 chr17 32622281 32622321 -56882232 - MIR3 SINE MIR -8 200 163 1897 133 3 56 chr17 32622321 32622644 -56881909 - AluSx SINE Alu -6 306 1 438 282 77 45 chr17 32622644 32622759 -56881794 - MIR3 SINE MIR -45 163 40 2092 119 3 10 chr17 32622994 32623297 -56881256 + AluSx SINE Alu 1 301 -11 239 254 16 16 chr17 32623665 32623728 -56880825 + MIR SINE MIR 76 138 -70 1144 229 99 3 chr17 32623831 32624133 -56880420 + MLT1D LTR MaLR 169 499 -6 2516 58 0 3 chr17 32624365 32624676 -56879877 - AluY SINE Alu -1 310 1 2237 105 0 0 chr17 32624676 32624982 -56879571 - AluSx SINE Alu -6 306 1 2004 112 0 36 chr17 32624982 32625287 -56879266 - AluSc SINE Alu -15 294 1 273 151 0 0 chr17 32625379 32625432 -56879121 + (CA)n Simple_repeat Simple_repeat 1 53 0 1139 134 93 10 chr17 32625753 32625947 -56878606 + MER6B DNA MER2_type 1 210 0 722 319 86 9 chr17 32626514 32626840 -56877713 - L1ME4a LINE L1 -189 5932 5582 300 179 0 0 chr17 32627148 32627204 -56877349 + MIR SINE MIR 105 160 -102 258 333 10 10 chr17 32627843 32627942 -56876611 - MER5A DNA MER1_type -25 164 66 299 261 68 0 chr17 32628064 32628122 -56876431 + MER5B DNA MER1_type 6 73 -105 2670 10 0 3 chr17 32628122 32628423 -56876130 + AluYa5 SINE Alu 1 300 -11 299 261 68 0 chr17 32628423 32628452 -56876101 + MER5B DNA MER1_type 73 99 -79 283 270 146 66 chr17 32628474 32628611 -56875942 + MIR3 SINE MIR 11 158 -50 498 285 20 13 chr17 32628618 32628769 -56875784 + MER117 DNA MER1_type 8 159 -38 1954 119 0 44 chr17 32629085 32629404 -56875149 + AluSq SINE Alu 1 305 -8 249 258 0 0 chr17 32629617 32629710 -56874843 + (TCCA)n Simple_repeat Simple_repeat 4 96 0 2128 109 0 0 chr17 32629850 32630124 -56874429 + AluSg SINE Alu 1 274 -36 625 273 79 73 chr17 32630125 32630466 -56874087 - L2 LINE L2 -81 3232 2887 2515 69 3 0 chr17 32630466 32630769 -56873784 + AluY SINE Alu 1 304 -7 625 273 79 73 chr17 32630769 32630783 -56873770 - L2 LINE L2 -426 2887 2875 3700 143 20 15 chr17 32630783 32630958 -56873595 - MER41B LTR ERV1 0 606 433 192 111 0 0 chr17 32630958 32630994 -56873559 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 2147 101 7 0 chr17 32630996 32631283 -56873270 - AluSq SINE Alu -24 289 1 3700 143 20 15 chr17 32631283 32631724 -56872829 - MER41B LTR ERV1 -173 433 1 645 239 47 24 chr17 32631768 32631981 -56872572 - L2 LINE L2 -866 2448 2231 285 319 116 14 chr17 32631997 32632204 -56872349 + MLT1K LTR MaLR 15 242 -346 342 0 0 0 chr17 32632505 32632543 -56872010 + (CA)n Simple_repeat Simple_repeat 2 39 0 430 268 49 0 chr17 32632740 32632882 -56871671 + MIR SINE MIR 38 186 -76 306 316 11 0 chr17 32633450 32633545 -56871008 + MIR SINE MIR 45 140 -122 534 274 31 40 chr17 32633574 32633684 -56870869 + L1MC4a LINE L1 5517 5626 -2182 3906 102 28 2 chr17 32633684 32634224 -56870329 - MER41A LTR ERV1 0 554 1 534 274 31 40 chr17 32634224 32634327 -56870226 + L1MC4a LINE L1 5626 5730 -2078 2267 113 3 0 chr17 32634327 32634637 -56869916 + AluSx SINE Alu 1 311 -1 999 222 14 0 chr17 32634663 32634879 -56869674 + L1MC4a LINE L1 5719 5937 -1871 237 33 0 0 chr17 32634883 32634913 -56869640 + (CA)n Simple_repeat Simple_repeat 2 31 0 265 192 0 26 chr17 32635556 32635634 -56868919 + CT-rich Low_complexity Low_complexity 1 76 0 927 241 19 105 chr17 32635643 32635907 -56868646 + MLT1J LTR MaLR 180 414 -97 2002 156 3 0 chr17 32635907 32636214 -56868339 + AluSx SINE Alu 1 308 -4 927 241 19 105 chr17 32636214 32636264 -56868289 + MLT1J LTR MaLR 414 467 -44 474 287 77 0 chr17 32636412 32636555 -56867998 - MLT1I LTR MaLR -231 178 25 241 304 0 14 chr17 32636588 32636657 -56867896 - MIR SINE MIR -81 127 60 2421 79 0 0 chr17 32636677 32636967 -56867586 + AluSq SINE Alu 11 300 -13 206 297 0 0 chr17 32637707 32637781 -56866772 + A-rich Low_complexity Low_complexity 1 74 0 367 316 43 50 chr17 32637858 32638230 -56866323 + L1MC/D LINE L1 2243 2614 -3532 2484 94 3 0 chr17 32638277 32638586 -56865967 - AluSp SINE Alu -3 310 1 714 303 81 17 chr17 32638656 32638877 -56865676 + L1MC/D LINE L1 4524 4730 -1416 2643 36 7 0 chr17 32638877 32639186 -56865367 + AluY SINE Alu 1 311 0 714 303 81 17 chr17 32639186 32639199 -56865354 + L1MC/D LINE L1 4730 4741 -1405 1930 137 0 7 chr17 32639199 32639484 -56865069 + AluSx SINE Alu 1 283 -29 714 303 81 17 chr17 32639484 32639767 -56864786 + L1MC/D LINE L1 4741 5075 -1071 2385 93 0 19 chr17 32639953 32640266 -56864287 + AluSg SINE Alu 3 309 -1 360 284 120 34 chr17 32640268 32640416 -56864137 + L1MC/D LINE L1 5296 5430 -2378 270 0 0 0 chr17 32640416 32640446 -56864107 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 360 284 120 34 chr17 32640446 32640589 -56863964 + L1MC/D LINE L1 5430 5612 -2196 6050 212 62 52 chr17 32640802 32641770 -56862783 - L1M4c LINE L1 -3093 3551 2594 733 161 7 35 chr17 32641770 32641913 -56862640 - L1MA3 LINE L1 0 6305 6167 6050 212 62 52 chr17 32641913 32641936 -56862617 - L1M4c LINE L1 -4050 2594 2573 2340 88 0 14 chr17 32641936 32642231 -56862322 - AluSc SINE Alu -18 291 1 6050 212 62 52 chr17 32642231 32643109 -56861444 - L1M4c LINE L1 -4071 2573 1705 1951 160 0 0 chr17 32643109 32643409 -56861144 - AluSx SINE Alu -12 300 1 6050 212 62 52 chr17 32643409 32643725 -56860828 - L1M4c LINE L1 -4939 1705 1394 1136 182 186 24 chr17 32643725 32643978 -56860575 + AluSg SINE Alu 1 294 -6 6050 212 62 52 chr17 32643978 32644699 -56859854 - L1M4c LINE L1 -5250 1394 486 2173 91 0 18 chr17 32644699 32645005 -56859548 + AluSx SINE Alu 4 304 0 6050 212 62 52 chr17 32645005 32645301 -56859252 - L1M4c LINE L1 -6158 486 194 251 314 52 57 chr17 32645305 32645691 -56858862 - L1M4 LINE L1 -1195 4951 4568 2434 253 44 59 chr17 32645741 32645853 -56858700 + L1ME3A LINE L1 2901 3013 -3133 2085 122 0 7 chr17 32645853 32646174 -56858379 - AluSx SINE Alu 0 319 1 2434 253 44 59 chr17 32646174 32646203 -56858350 + L1ME3A LINE L1 3013 3041 -3105 2440 169 14 2 chr17 32646203 32646616 -56857937 - MER47B DNA MER2_type 0 418 1 2434 253 44 59 chr17 32646616 32646810 -56857743 + L1ME3A LINE L1 3041 3236 -2910 1693 180 0 7 chr17 32646810 32647120 -56857433 + AluJo SINE Alu 1 308 0 2434 253 44 59 chr17 32647120 32647317 -56857236 + L1ME3A LINE L1 3236 3434 -2712 2053 121 7 0 chr17 32647317 32647597 -56856956 + AluSp SINE Alu 11 292 -21 2434 253 44 59 chr17 32647597 32648124 -56856429 + L1ME3A LINE L1 3434 3949 -2197 703 152 0 0 chr17 32648130 32648242 -56856311 - FLAM_C SINE Alu -2 141 30 2473 227 81 86 chr17 32648258 32648571 -56855982 + L1ME3A LINE L1 3934 4247 -1923 1988 142 4 0 chr17 32648571 32648884 -56855669 - AluSq SINE Alu 0 314 1 2473 227 81 86 chr17 32648884 32649428 -56855125 + L1ME3A LINE L1 4247 4792 -1378 249 33 0 0 chr17 32649428 32649458 -56855095 + (TG)n Simple_repeat Simple_repeat 1 30 0 2473 227 81 86 chr17 32649458 32650233 -56854320 + L1ME3A LINE L1 4792 5558 -612 1848 146 22 0 chr17 32650233 32650507 -56854046 - AluSx SINE Alu -32 280 1 2473 227 81 86 chr17 32650507 32651004 -56853549 + L1ME3A LINE L1 5558 6056 -114 2254 117 0 7 chr17 32651385 32651693 -56852860 - AluSx SINE Alu -6 306 1 184 243 100 0 chr17 32651926 32651996 -56852557 + L3 LINE CR1 80 156 -1421 915 184 25 13 chr17 32652235 32652393 -56852160 - AluJb SINE Alu -16 296 137 1000 271 133 8 chr17 32652509 32652870 -56851683 - MLT1I LTR MaLR -3 406 1 2008 105 0 59 chr17 32653240 32653544 -56851009 + AluSx SINE Alu 1 286 -26 22 0 0 0 chr17 32653576 32653598 -56850955 + AT_rich Low_complexity Low_complexity 1 22 0 749 139 46 26 chr17 32653598 32653749 -56850804 - HERVH LTR ERV1 -7559 154 1 818 98 39 65 chr17 32653749 32653902 -56850651 - LTR7 LTR ERV1 0 450 302 1899 139 25 0 chr17 32654024 32654304 -56850249 - AluSx SINE Alu -25 287 1 1274 154 80 136 chr17 32654304 32654680 -56849873 - MER57A LTR ERV1 -6 397 43 1166 169 250 40 chr17 32654741 32655113 -56849440 + LTR7 LTR ERV1 1 450 0 208 355 43 7 chr17 32655116 32655254 -56849299 + L3 LINE CR1 468 610 -967 737 179 0 0 chr17 32655651 32655763 -56848790 + AluSq/x SINE Alu 1 112 -201 3358 122 18 6 chr17 32655763 32656265 -56848288 + MER9 LTR ERVK 4 511 0 4502 101 30 21 chr17 32656265 32656921 -56847632 + HERVK9 LTR ERVK 1 662 -5254 23521 86 14 1 chr17 32656921 32660801 -56843752 + HERVK9 LTR ERVK 1625 5634 -282 2185 136 11 13 chr17 32660827 32661181 -56843372 + HERVK9 LTR ERVK 5635 5916 0 3380 106 41 4 chr17 32661181 32661674 -56842879 + MER9 LTR ERVK 1 511 0 917 193 0 6 chr17 32661706 32661872 -56842681 + FRAM SINE Alu 1 165 -1 245 207 18 63 chr17 32662094 32662205 -56842348 + L2 LINE L2 3079 3184 -129 483 217 0 0 chr17 32662222 32662314 -56842239 + MER34 LTR ERV1 5 96 -446 2166 115 0 0 chr17 32662391 32662693 -56841860 - AluSx SINE Alu 0 305 4 2244 120 0 0 chr17 32662704 32663003 -56841550 - AluSx SINE Alu -13 299 1 1877 117 0 55 chr17 32663027 32663317 -56841236 - AluSx SINE Alu -15 297 24 1579 160 33 27 chr17 32663486 32663786 -56840767 - AluJo SINE Alu -2 310 9 2198 95 3 0 chr17 32663824 32664107 -56840446 - AluSq SINE Alu -29 284 1 1375 200 20 76 chr17 32664109 32664593 -56839960 + LTR9 LTR ERV1 61 475 -137 594 181 67 48 chr17 32664590 32664779 -56839774 + LTR19C LTR ERV1 351 779 0 * 2114 122 3 3 chr17 32664794 32665088 -56839465 - AluSq SINE Alu -19 294 1 3697 107 10 0 chr17 32665131 32665643 -56838910 + MER41B LTR ERV1 1 517 -118 1828 135 4 18 chr17 32665643 32665792 -56838761 - AluSp SINE Alu -2 311 166 3893 84 328 0 chr17 32665792 32666414 -56838139 + LTR12 LTR ERV1 1 826 0 1828 135 4 18 chr17 32666414 32666545 -56838008 - AluSp SINE Alu -147 166 35 936 81 0 0 chr17 32666545 32666669 -56837884 + MER41A LTR ERV1 431 554 0 342 0 0 0 chr17 32666828 32666866 -56837687 + (TTA)n Simple_repeat Simple_repeat 1 38 0 1260 184 132 29 chr17 32667128 32667400 -56837153 + AluSc SINE Alu 1 300 -9 898 214 78 6 chr17 32667634 32667852 -56836701 + MLT2B1 LTR ERVL 3 217 -236 312 70 0 0 chr17 32667868 32667911 -56836642 + (TC)n Simple_repeat Simple_repeat 2 44 0 1827 227 127 20 chr17 32668560 32669097 -56835456 + L1MC4 LINE L1 6488 7081 -961 854 260 138 16 chr17 32669102 32669261 -56835292 + L1MC4 LINE L1 7413 7551 -491 2026 172 121 5 chr17 32669261 32669674 -56834879 - LOR1b LTR ERV1 0 461 1 854 260 138 16 chr17 32669674 32669826 -56834727 + L1MC4 LINE L1 7551 7762 -280 793 206 146 10 chr17 32669827 32670026 -56834527 - MLT1G LTR MaLR -3 587 362 * 1334 147 9 0 chr17 32670017 32670228 -56834325 + LOR1b LTR ERV1 211 423 -38 * 1339 198 122 23 chr17 32670226 32670599 -56833954 - MLT1G LTR MaLR -209 386 1 270 254 94 43 chr17 32670601 32670665 -56833888 + L1MC4 LINE L1 7758 7817 -225 2290 82 20 3 chr17 32670665 32670959 -56833594 - AluSq SINE Alu -10 303 5 270 254 94 43 chr17 32670959 32671032 -56833521 + L1MC4 LINE L1 7817 7902 -140 325 358 121 4 chr17 32671076 32671308 -56833245 + L1ME LINE L1 5260 5518 -644 1912 170 0 3 chr17 32671511 32671811 -56832742 + AluJo SINE Alu 1 299 -13 207 0 0 0 chr17 32671811 32671834 -56832719 + (TA)n Simple_repeat Simple_repeat 2 24 0 2237 107 0 32 chr17 32672426 32672736 -56831817 + AluSx SINE Alu 1 300 -12 282 241 0 0 chr17 32672928 32673011 -56831542 + L1ME3A LINE L1 5225 5307 -839 1099 150 0 0 chr17 32673026 32673186 -56831367 + AluSg/x SINE Alu 135 294 -18 611 252 73 34 chr17 32673214 32673507 -56831046 + L1ME3A LINE L1 5324 5625 -537 651 241 14 7 chr17 32673509 32673650 -56830903 + MLT1H1 LTR MaLR 1 142 -413 336 228 62 62 chr17 32673845 32673990 -56830563 + MLT1H1 LTR MaLR 180 324 -271 311 167 5 5 chr17 32674076 32674146 -56830407 + MLT1G LTR MaLR 526 590 0 576 282 50 19 chr17 32674146 32674453 -56830100 + L1ME3A LINE L1 5621 5948 -214 408 200 0 0 chr17 32674723 32674808 -56829745 + GA-rich Low_complexity Low_complexity 3 87 0 2219 86 0 36 chr17 32674814 32675116 -56829437 + AluSg1 SINE Alu 1 291 -18 1229 121 0 0 chr17 32675116 32675290 -56829263 + AluSc SINE Alu 132 305 -4 834 191 165 5 chr17 32675497 32675621 -56828932 + MLT1A1 LTR MaLR 3 106 -259 2205 156 47 40 chr17 32675621 32676044 -56828509 - MSTB LTR MaLR 0 426 1 834 191 165 5 chr17 32676044 32676107 -56828446 + MLT1A1 LTR MaLR 106 220 -145 481 127 14 0 chr17 32676105 32676176 -56828377 + MLT1A1 LTR MaLR 252 323 -42 * 259 338 65 7 chr17 32676987 32677141 -56827412 - MER20B DNA MER1_type -614 169 7 2529 46 0 7 chr17 32677233 32677536 -56827017 - AluY SINE Alu -10 301 1 1739 112 8 8 chr17 32678194 32678443 -56826110 + AluSx SINE Alu 64 312 0 2320 94 0 46 chr17 32678854 32679182 -56825371 - AluSq SINE Alu 0 313 1 2979 204 34 27 chr17 32679598 32680068 -56824485 - MER82 DNA MER2_type -1 652 176 2015 147 0 10 chr17 32680068 32680382 -56824171 + AluSx SINE Alu 1 311 -1 2979 204 34 27 chr17 32680382 32680532 -56824021 - MER82 DNA MER2_type -477 176 28 565 283 178 48 chr17 32680525 32680981 -56823572 + LTR67 LTR ERVL 31 545 -12 * 914 184 79 16 chr17 32681612 32681802 -56822751 - MLT1A2 LTR MaLR 0 374 173 296 62 0 42 chr17 32681805 32681853 -56822700 + (GGGAGA)n Simple_repeat Simple_repeat 3 48 0 645 144 0 66 chr17 32681953 32682134 -56822419 + (GGGAGA)n Simple_repeat Simple_repeat 1 169 0 761 170 88 6 chr17 32682153 32682312 -56822241 - MLT1A2 LTR MaLR -218 172 1 221 307 270 0 chr17 32682344 32682481 -56822072 + MIR3 SINE MIR 24 197 -11 678 179 179 6 chr17 32683020 32683176 -56821377 + MER5A DNA MER1_type 7 189 0 387 284 116 13 chr17 32683173 32683328 -56821225 + MIR3 SINE MIR 1 171 -37 * 467 168 32 32 chr17 32683707 32683802 -56820751 - MER5A DNA MER1_type -1 188 94 664 163 76 70 chr17 32683812 32683984 -56820569 + MLT1B LTR MaLR 1 173 -217 959 178 14 33 chr17 32683986 32684200 -56820353 - AluSx SINE Alu -102 210 1 206 245 57 0 chr17 32685030 32685083 -56819470 - MIR3 SINE MIR -25 183 128 320 203 0 0 chr17 32685337 32685406 -56819147 - AluJ/monomer SINE Alu 0 302 234 241 288 245 10 chr17 32685409 32685801 -56818752 + L2 LINE L2 2447 2930 -384 216 169 261 0 chr17 32686182 32686247 -56818306 - MIR SINE MIR -87 175 94 447 264 71 21 chr17 32686247 32686387 -56818166 + L1ME LINE L1 136 282 -5923 * 1938 278 49 37 chr17 32686360 32686948 -56817605 + L1ME LINE L1 1054 1658 -4738 2261 100 0 3 chr17 32686948 32687258 -56817295 + AluY SINE Alu 1 309 -2 1938 278 49 37 chr17 32687258 32687559 -56816994 + L1ME LINE L1 1658 1954 -4442 41506 65 7 4 chr17 32687640 32693767 -56810786 - L1PA5 LINE L1 -1 6153 5 1813 151 7 3 chr17 32694300 32694605 -56809948 + AluJb SINE Alu 1 306 -6 516 231 101 111 chr17 32694793 32695356 -56809197 + LTR33A LTR ERVL 1 523 0 510 258 26 16 chr17 32695406 32695557 -56808996 + MIR SINE MIR 5 154 -55 239 272 52 12 chr17 32696011 32696115 -56808438 - MIR SINE MIR -60 148 86 953 123 0 0 chr17 32696176 32696338 -56808215 + AluSc SINE Alu 144 305 0 1400 181 3 58 chr17 32696350 32696485 -56808068 + AluJo SINE Alu 1 142 -170 1656 154 7 4 chr17 32696485 32696758 -56807795 - AluSx SINE Alu -23 289 16 1400 181 3 58 chr17 32696758 32696932 -56807621 + AluJo SINE Alu 142 293 -19 186 206 0 0 chr17 32697021 32697055 -56807498 - L2 LINE L2 -18 3254 3221 275 324 57 0 chr17 32697090 32697195 -56807358 - MIR SINE MIR -114 148 38 411 318 52 57 chr17 32697501 32697693 -56806860 + L2 LINE L2 2871 3061 -211 307 316 65 32 chr17 32697809 32697964 -56806589 - MER5B DNA MER1_type -18 160 1 599 247 0 16 chr17 32698033 32698050 -56806503 + GA-rich Low_complexity Low_complexity 1 17 -1384 5587 92 24 70 chr17 32698050 32698916 -56805637 - LTR12 LTR ERV1 0 826 1 599 247 0 16 chr17 32698916 32699074 -56805479 + GA-rich Low_complexity Low_complexity 17 176 -1225 2081 102 9 19 chr17 32699074 32699389 -56805164 + AluSx SINE Alu 1 312 0 599 247 0 16 chr17 32699389 32699458 -56805095 + GA-rich Low_complexity Low_complexity 176 1401 0 461 268 78 13 chr17 32699590 32699743 -56804810 + MIR SINE MIR 32 194 -68 284 282 225 0 chr17 32699758 32699900 -56804653 - MER5A DNA MER1_type -7 182 9 1878 180 148 9 chr17 32700121 32700559 -56803994 - MLT1D LTR MaLR -6 499 1 259 331 162 0 chr17 32701723 32701859 -56802694 + MIR SINE MIR 3 160 -102 231 114 0 0 chr17 32702057 32702092 -56802461 + (TC)n Simple_repeat Simple_repeat 2 36 0 1858 170 0 3 chr17 32702111 32702417 -56802136 - AluJb SINE Alu -7 305 1 429 281 45 34 chr17 32702532 32702710 -56801843 - MIR SINE MIR -34 228 49 273 29 0 0 chr17 32703232 32703266 -56801287 + (CA)n Simple_repeat Simple_repeat 2 35 0 431 163 23 35 chr17 32703416 32703502 -56801051 + FLAM_A SINE Alu 1 85 -57 21 0 0 0 chr17 32703580 32703601 -56800952 + AT_rich Low_complexity Low_complexity 1 21 0 511 248 86 74 chr17 32703608 32703965 -56800588 + L1ME3A LINE L1 2143 2460 -3755 2287 89 0 13 chr17 32703965 32704280 -56800273 + AluY SINE Alu 1 311 0 511 248 86 74 chr17 32704280 32704348 -56800205 + L1ME3A LINE L1 2460 2526 -3689 584 275 41 32 chr17 32704353 32704691 -56799862 + L1ME3A LINE L1 4246 4586 -1629 * 1552 174 50 30 chr17 32704687 32704804 -56799749 + L1M4 LINE L1 4963 5076 -1070 1894 71 114 4 chr17 32704804 32705085 -56799468 - AluSx SINE Alu 0 312 1 1552 174 50 30 chr17 32705085 32705363 -56799190 + L1M4 LINE L1 5076 5366 -780 695 104 0 38 chr17 32705375 32705481 -56799072 + AluSc SINE Alu 35 136 -173 656 197 0 0 chr17 32705605 32705737 -56798816 + L1MA10 LINE L1 6196 6327 -7 1475 257 124 33 chr17 32705738 32706274 -56798279 + L1ME3A LINE L1 4553 5039 -1200 1598 196 33 0 chr17 32706274 32706575 -56797978 - AluJo SINE Alu 0 312 2 1475 257 124 33 chr17 32706575 32706780 -56797773 + L1ME3A LINE L1 5039 5224 -1015 1654 177 3 3 chr17 32706780 32707063 -56797490 + AluJb SINE Alu 10 292 -20 1475 257 124 33 chr17 32707063 32707673 -56796880 + L1ME3A LINE L1 5224 6037 -202 331 214 60 68 chr17 32707702 32707819 -56796734 + L1ME3A LINE L1 6003 6118 -121 352 296 54 75 chr17 32707907 32708093 -56796460 - MLT1L LTR MaLR -418 197 16 431 322 53 20 chr17 32708496 32708648 -56795905 - MIR SINE MIR -85 177 21 275 308 131 20 chr17 32709040 32709238 -56795315 - L3 LINE CR1 -109 1468 1249 2820 197 97 31 chr17 32709367 32709932 -56794621 + Zaphod DNA AcHobo 43 672 -3359 1576 120 50 173 chr17 32709932 32710086 -56794467 - MER1B DNA MER1_type -2373 337 256 2187 101 3 0 chr17 32710086 32710384 -56794169 + AluSq SINE Alu 1 299 -14 1576 120 50 173 chr17 32710384 32710611 -56793942 - MER1B DNA MER1_type -2454 256 3 2820 197 97 31 chr17 32710611 32710809 -56793744 + Zaphod DNA AcHobo 672 856 -3175 853 243 67 0 chr17 32710809 32711019 -56793534 - MER58A DNA MER1_type 0 224 1 2101 103 3 35 chr17 32711096 32711408 -56793145 - AluSx SINE Alu -10 302 1 1176 192 20 28 chr17 32711524 32711779 -56792774 + AluJo SINE Alu 36 288 -24 686 160 71 30 chr17 32711802 32711887 -56792666 + Zaphod DNA AcHobo 3596 3676 -355 1697 189 0 0 chr17 32711887 32712194 -56792359 + AluJb SINE Alu 1 307 -5 686 160 71 30 chr17 32712194 32712277 -56792276 + Zaphod DNA AcHobo 3676 3771 -260 1954 106 11 3 chr17 32712278 32712583 -56791970 - AluSx SINE Alu 0 307 1 1976 172 26 3 chr17 32712614 32712743 -56791810 - Tigger3(Golem) DNA MER2_type -879 2149 2024 1227 146 132 79 chr17 32712743 32713023 -56791530 - AluJb SINE Alu -7 295 1 1976 172 26 3 chr17 32713023 32713236 -56791317 - Tigger3(Golem) DNA MER2_type -1004 2024 2 232 172 17 52 chr17 32713236 32713294 -56791259 + MIR SINE MIR 152 207 -55 334 267 139 92 chr17 32713394 32713427 -56791126 + L1MC4a LINE L1 5883 5913 -1895 2214 97 3 0 chr17 32713427 32713725 -56790828 - AluSp SINE Alu -14 299 1 334 267 139 92 chr17 32713725 32713972 -56790581 + L1MC4a LINE L1 5913 6176 -1632 218 286 88 68 chr17 32713988 32714135 -56790418 - L3 LINE CR1 -478 1099 950 567 224 152 18 chr17 32715501 32715666 -56788887 + MIR SINE MIR 28 214 -48 509 282 81 6 chr17 32716024 32716198 -56788355 + MIR SINE MIR 35 221 -41 466 217 0 61 chr17 32716388 32716503 -56788050 - MIR SINE MIR -84 124 17 189 390 0 0 chr17 32716679 32716761 -56787792 + MIR SINE MIR 176 257 -5 435 332 58 9 chr17 32716893 32717116 -56787437 - L2 LINE L2 -1217 2097 1864 505 302 76 6 chr17 32717187 32717398 -56787155 - MIR SINE MIR -3 259 36 1781 176 0 0 chr17 32717694 32718006 -56786547 + AluJb SINE Alu 1 312 0 291 54 0 0 chr17 32718021 32718058 -56786495 + (CA)n Simple_repeat Simple_repeat 2 38 0 219 271 47 12 chr17 32718089 32718174 -56786379 - MIR SINE MIR -65 197 110 358 293 168 6 chr17 32718307 32718474 -56786079 - L2 LINE L2 0 3272 3079 260 303 37 17 chr17 32718733 32718855 -56785698 + MIR SINE MIR 26 146 -62 737 271 89 0 chr17 32719591 32719816 -56784737 - MIR SINE MIR -12 250 6 600 290 31 52 chr17 32719857 32720147 -56784406 - L3 LINE CR1 -24 1553 1270 21 0 0 0 chr17 32720365 32720386 -56784167 + AT_rich Low_complexity Low_complexity 1 21 0 306 241 26 95 chr17 32720388 32720504 -56784049 - L1ME4a LINE L1 -1 6120 6013 4445 159 18 16 chr17 32720569 32720906 -56783647 + L1MCa LINE L1 163 498 -5928 2008 99 0 7 chr17 32720906 32721211 -56783342 + AluSg SINE Alu 1 303 0 4445 159 18 16 chr17 32721211 32721664 -56782889 + L1MCa LINE L1 498 955 -5471 1687 164 3 16 chr17 32721664 32721968 -56782585 + AluJb SINE Alu 1 300 -12 242 150 0 0 chr17 32721968 32722008 -56782545 - L1MCa LINE L1 -5345 1081 1042 1001 121 13 0 chr17 32722018 32722175 -56782378 + L1MCa LINE L1 1769 1927 -4499 535 250 125 6 chr17 32722176 32722344 -56782209 - MIR3 SINE MIR -12 196 9 191 204 23 0 chr17 32722897 32722941 -56781612 + MIR SINE MIR 98 142 -66 253 239 45 0 chr17 32722952 32723019 -56781534 - L2 LINE L2 -4 3309 3240 2089 125 0 3 chr17 32723072 32723369 -56781184 + AluSx SINE Alu 1 296 -16 677 264 6 0 chr17 32723477 32723651 -56780902 + L1MEd LINE L1 31 205 -5914 926 285 63 76 chr17 32723711 32724318 -56780235 + L1MEd LINE L1 424 1022 -5097 25 65 0 0 chr17 32724356 32724402 -56780151 + AT_rich Low_complexity Low_complexity 1 46 0 1310 143 20 89 chr17 32724402 32724562 -56779991 - L1MA7 LINE L1 -3 6288 6118 1898 129 7 13 chr17 32724562 32724865 -56779688 - AluJb SINE Alu -11 301 1 1310 143 20 89 chr17 32724865 32725129 -56779424 - L1MA7 LINE L1 -173 6118 5926 1067 164 27 41 chr17 32725131 32725307 -56779246 - Tigger1 DNA MER2_type 0 2418 2243 2149 88 0 3 chr17 32725307 32725614 -56778939 - AluSq SINE Alu 0 306 1 1067 164 27 41 chr17 32725614 32725656 -56778897 - Tigger1 DNA MER2_type -175 2243 2202 656 215 0 40 chr17 32725639 32725788 -56778765 - Tigger1 DNA MER2_type -2255 163 21 * 6575 148 13 15 chr17 32725793 32727245 -56777308 - L1MA7 LINE L1 -366 5925 4481 1663 140 44 4 chr17 32727245 32727571 -56776982 - AluSq SINE Alu 0 337 1 6575 148 13 15 chr17 32727571 32727900 -56776653 - L1MA7 LINE L1 -1810 4481 4153 579 193 57 7 chr17 32727900 32728040 -56776513 + Charlie1 DNA MER1_type 803 949 -1812 921 268 24 20 chr17 32728076 32728330 -56776223 - MER69 DNA AcHobo -673 553 299 226 304 36 89 chr17 32728400 32728512 -56776041 + MLT2E LTR ERVL 69 174 -454 268 229 0 0 chr17 32728696 32728757 -56775796 + ERVL LTR ERVL 3877 3937 -1827 1794 150 17 0 chr17 32728758 32729052 -56775501 + AluSx SINE Alu 3 301 -11 757 265 62 94 chr17 32729166 32729264 -56775289 + L1ME3 LINE L1 4745 4845 -1317 1958 178 37 6 chr17 32729264 32729618 -56774935 + MLT1A1 LTR MaLR 1 365 0 757 265 62 94 chr17 32729618 32729933 -56774620 + L1ME3 LINE L1 4845 5169 -993 821 205 12 30 chr17 32729933 32730099 -56774454 + FRAM SINE Alu 4 166 0 757 265 62 94 chr17 32730099 32730894 -56773659 + L1ME3 LINE L1 5169 5952 -210 235 0 0 0 chr17 32731088 32731114 -56773439 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1291 142 21 97 chr17 32731114 32731403 -56773150 - AluJb SINE Alu -1 307 16 289 139 125 14 chr17 32731677 32731749 -56772804 + L1MEd LINE L1 1167 1246 -4873 2403 53 0 16 chr17 32731778 32732082 -56772471 + AluY SINE Alu 1 299 -12 489 246 31 8 chr17 32732095 32732225 -56772328 + MER94 DNA DNA 1 133 -1 231 305 123 13 chr17 32732846 32733000 -56771553 - L1MC/D LINE L1 -2084 5724 5554 258 194 0 0 chr17 32733034 32733096 -56771457 + A-rich Low_complexity Low_complexity 1 62 0 1207 70 0 0 chr17 32733226 32733384 -56771169 + AluY SINE Alu 153 310 -1 228 243 158 40 chr17 32733392 32733594 -56770959 + L1ME3A LINE L1 1843 2068 -4472 23 0 0 0 chr17 32733661 32733684 -56770869 + AT_rich Low_complexity Low_complexity 1 23 0 2169 110 3 0 chr17 32733988 32734288 -56770265 + AluSq SINE Alu 1 301 -12 2020 246 79 69 chr17 32734370 32734635 -56769918 + L1ME3A LINE L1 2524 2785 -3755 1940 102 49 30 chr17 32734635 32734940 -56769613 + AluSx SINE Alu 1 311 -1 2020 246 79 69 chr17 32734940 32735949 -56768604 + L1ME3A LINE L1 2785 3820 -2720 1349 129 183 38 chr17 32735949 32736212 -56768341 + AluJb SINE Alu 1 301 -11 2020 246 79 69 chr17 32736212 32736537 -56768016 + L1ME3A LINE L1 3820 4140 -2400 583 165 0 0 chr17 32736560 32736651 -56767902 + U6 snRNA snRNA 17 107 0 4375 83 40 2 chr17 32736651 32737256 -56767297 + L1MA2 LINE L1 5445 6072 -232 1075 110 13 0 chr17 32737285 32737440 -56767113 + AluSq SINE Alu 108 264 -49 1734 48 35 4 chr17 32737440 32737667 -56766886 + L1MA1 LINE L1 6069 6302 0 397 305 35 28 chr17 32737693 32737834 -56766719 + L1ME3A LINE L1 4146 4287 -2253 1536 201 121 51 chr17 32737892 32738060 -56766493 + MSTB2 LTR MaLR 15 170 -287 1621 164 30 33 chr17 32738060 32738364 -56766189 - AluJo SINE Alu -9 303 1 1536 201 121 51 chr17 32738364 32738608 -56765945 + MSTB2 LTR MaLR 170 456 -1 25 0 0 0 chr17 32738608 32738633 -56765920 + AT_rich Low_complexity Low_complexity 1 25 0 677 297 27 20 chr17 32738633 32738926 -56765627 + L1ME3A LINE L1 4348 4642 -1898 839 188 7 0 chr17 32738931 32739080 -56765473 + FRAM SINE Alu 16 165 -11 1822 147 45 0 chr17 32739114 32739400 -56765153 + AluSx SINE Alu 3 301 -11 1202 299 31 28 chr17 32739428 32740175 -56764378 + L1ME3A LINE L1 4705 5453 -1087 2060 128 7 0 chr17 32740188 32740484 -56764069 - AluSx SINE Alu -14 298 1 2170 81 0 0 chr17 32740494 32740778 -56763775 - AluY SINE Alu -7 304 21 2180 180 69 65 chr17 32740880 32741370 -56763183 + L1ME2 LINE L1 5586 6073 -91 2061 116 7 3 chr17 32741370 32741680 -56762873 + AluSq SINE Alu 1 311 -2 2180 180 69 65 chr17 32741680 32741745 -56762808 + L1ME2 LINE L1 6073 6146 -18 2425 61 0 0 chr17 32741745 32742042 -56762511 + AluY SINE Alu 1 297 -14 410 270 127 36 chr17 32742075 32742425 -56762128 + L1ME3A LINE L1 5591 5986 -579 1993 124 0 13 chr17 32742584 32742883 -56761670 + AluSg SINE Alu 1 295 -15 900 136 34 0 chr17 32742883 32743030 -56761523 + AluSg/x SINE Alu 134 285 -27 225 0 0 0 chr17 32743030 32743055 -56761498 + (CA)n Simple_repeat Simple_repeat 2 26 0 414 211 135 58 chr17 32743091 32743299 -56761254 + L1ME3A LINE L1 6139 6362 -196 313 333 22 44 chr17 32743342 32743525 -56761028 + L1ME3A LINE L1 6359 6537 -27 2005 117 7 0 chr17 32743685 32743994 -56760559 + AluSq SINE Alu 1 311 0 220 300 86 82 chr17 32744329 32744549 -56760004 - L2 LINE L2 -224 3048 2828 1575 193 42 47 chr17 32745712 32746096 -56758457 - MLT1B LTR MaLR -8 382 1 252 0 0 0 chr17 32746199 32746227 -56758326 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 2288 86 0 0 chr17 32746489 32746780 -56757773 - AluSg SINE Alu -19 291 1 732 157 92 160 chr17 32747833 32748127 -56756426 + LTR12 LTR ERV1 1 274 -440 290 259 12 0 chr17 32748139 32748220 -56756333 + LTR30 LTR ERV1 539 620 -102 704 197 25 0 chr17 32748225 32748347 -56756206 + LTR12 LTR ERV1 360 484 -230 506 253 40 46 chr17 32748838 32749012 -56755541 + MIR SINE MIR 28 200 -62 616 225 28 62 chr17 32749047 32749225 -56755328 - MIR SINE MIR -43 219 48 2097 110 17 0 chr17 32749226 32749527 -56755026 - AluSx SINE Alu -6 306 1 2039 102 10 7 chr17 32750288 32750581 -56753972 + AluSc SINE Alu 1 294 -15 996 138 0 0 chr17 32750581 32750726 -56753827 + AluSg/x SINE Alu 135 279 -31 271 18 89 0 chr17 32750728 32750784 -56753769 + (TA)n Simple_repeat Simple_repeat 2 62 0 538 290 19 7 chr17 32750823 32750978 -56753575 + MIR SINE MIR 105 261 -1 282 272 116 27 chr17 32751077 32751224 -56753329 - MIR3 SINE MIR -8 200 41 214 203 156 31 chr17 32751716 32751780 -56752773 - L2 LINE L2 -65 3207 3136 1904 138 14 0 chr17 32752213 32752504 -56752049 + AluSx SINE Alu 1 295 -17 639 275 134 40 chr17 32752753 32753127 -56751426 - MLT1J LTR MaLR -3 508 100 266 271 59 12 chr17 32753152 32753237 -56751316 - MER5A DNA MER1_type 0 189 101 2233 87 0 3 chr17 32753302 32753600 -56750953 + AluSq SINE Alu 7 303 -10 205 360 12 0 chr17 32754037 32754123 -56750430 - MIR SINE MIR -174 88 2 2396 103 244 187 chr17 32754398 32755314 -56749239 + LTR12 LTR ERV1 57 714 0 316 331 86 29 chr17 32755909 32756084 -56748469 - MER5A DNA MER1_type 0 189 5 183 381 58 13 chr17 32756351 32756506 -56748047 + MIR SINE MIR 14 175 -87 241 100 40 0 chr17 32756724 32756774 -56747779 + (TG)n Simple_repeat Simple_repeat 2 53 0 345 263 70 105 chr17 32756874 32757159 -56747394 - L1ME4a LINE L1 -4 6117 5843 2147 109 0 6 chr17 32757292 32757603 -56746950 - AluSx SINE Alu -2 310 2 630 293 79 36 chr17 32757757 32758198 -56746355 + L1ME4a LINE L1 5414 5873 -248 1608 147 23 36 chr17 32758751 32759057 -56745496 + AluJo SINE Alu 11 312 0 236 130 22 0 chr17 32759059 32759105 -56745448 + GA-rich Low_complexity Low_complexity 1 47 0 258 328 45 52 chr17 32759112 32759179 -56745374 + L1MEd LINE L1 568 634 -5485 2015 99 46 3 chr17 32759179 32759463 -56745090 + AluSx SINE Alu 1 296 -16 258 328 45 52 chr17 32759463 32759663 -56744890 + L1MEd LINE L1 634 833 -5286 424 269 185 36 chr17 32760487 32760795 -56743758 + L1ME4a LINE L1 5731 6084 -37 186 283 196 0 chr17 32760862 32760954 -56743599 + MIR SINE MIR 3 112 -150 660 216 32 63 chr17 32760965 32761155 -56743398 - L2 LINE L2 -2 3311 3128 331 259 24 0 chr17 32761162 32761247 -56743306 + MIR SINE MIR 162 248 -14 201 278 79 29 chr17 32762213 32762366 -56742187 - MIR SINE MIR -13 249 51 557 208 0 75 chr17 32762420 32762540 -56742013 - MER81 DNA DNA -1 113 3 1866 131 31 0 chr17 32762804 32763095 -56741458 + AluSq SINE Alu 1 300 -13 389 232 176 8 chr17 32763162 32763287 -56741266 + MIR3 SINE MIR 21 166 -42 461 225 33 3 chr17 32763316 32763442 -56741111 - MIR3 SINE MIR -53 155 19 410 235 61 35 chr17 32763887 32764002 -56740551 - MIR SINE MIR -139 123 6 199 200 0 80 chr17 32764165 32764215 -56740338 - L2 LINE L2 0 3272 3227 206 250 141 0 chr17 32764288 32764352 -56740201 - L2 LINE L2 -213 3059 2987 371 279 27 0 chr17 32764658 32764769 -56739784 - MIR SINE MIR -100 162 49 288 0 0 0 chr17 32764849 32764881 -56739672 + (A)n Simple_repeat Simple_repeat 1 32 0 407 279 86 79 chr17 32765333 32765360 -56739193 - MLT1K LTR MaLR -263 325 300 1919 108 18 4 chr17 32765360 32765665 -56738888 + AluSx SINE Alu 1 309 0 407 279 86 79 chr17 32765665 32765916 -56738637 - MLT1K LTR MaLR -288 300 44 2146 123 0 0 chr17 32766239 32766547 -56738006 + AluY SINE Alu 2 309 -2 2119 104 10 0 chr17 32767876 32768165 -56736388 + AluSg SINE Alu 1 292 -18 1192 316 23 25 chr17 32768237 32768722 -56735831 + MLT1K LTR MaLR 19 502 -86 409 291 240 0 chr17 32769649 32769828 -56734725 + MLT1L LTR MaLR 317 538 -77 1570 189 37 0 chr17 32769828 32770004 -56734549 - AluJo SINE Alu -4 308 115 216 0 0 0 chr17 32770004 32770028 -56734525 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1570 189 37 0 chr17 32770028 32770148 -56734405 - AluJo SINE Alu -197 115 1 514 227 42 0 chr17 32770182 32770301 -56734252 + MER5A DNA MER1_type 1 124 -65 544 178 0 0 chr17 32770303 32770404 -56734149 + AluSg/x SINE Alu 211 311 -1 205 188 71 94 chr17 32770404 32770489 -56734064 - MER5A DNA MER1_type -105 84 2 1333 116 0 0 chr17 32770922 32771112 -56733441 - AluSg/x SINE Alu -11 301 112 1318 174 0 0 chr17 32771253 32771483 -56733070 - AluSq SINE Alu -13 300 71 1451 181 3 7 chr17 32771603 32771890 -56732663 - AluJo SINE Alu -26 286 1 2408 51 0 13 chr17 32771973 32772287 -56732266 - AluY SINE Alu 0 311 2 216 0 0 0 chr17 32773177 32773201 -56731352 + (A)n Simple_repeat Simple_repeat 1 24 0 233 129 0 0 chr17 32773219 32773250 -56731303 + Alu SINE Alu 1 31 -270 1931 146 3 10 chr17 32773252 32773386 -56731167 + AluSx SINE Alu 1 134 -178 1915 135 10 7 chr17 32773386 32773690 -56730863 + AluSq SINE Alu 1 305 -8 1931 146 3 10 chr17 32773690 32773864 -56730689 + AluSx SINE Alu 134 307 -5 826 178 0 7 chr17 32773873 32774019 -56730534 + AluJb SINE Alu 160 304 -8 1622 151 42 0 chr17 32774022 32774306 -56730247 + AluSx SINE Alu 1 296 -16 227 152 0 0 chr17 32774309 32774355 -56730198 - L1MC4 LINE L1 -1339 6703 6658 23 33 0 0 chr17 32774361 32774391 -56730162 + AT_rich Low_complexity Low_complexity 1 30 0 888 129 7 7 chr17 32774843 32774998 -56729555 - AluY SINE Alu -21 290 136 2232 93 0 0 chr17 32775145 32775436 -56729117 + AluSc SINE Alu 1 291 -18 279 225 14 0 chr17 32775572 32775643 -56728910 + L1PB4 LINE L1 6068 6139 -17 2004 115 7 3 chr17 32775646 32775942 -56728611 - AluSg SINE Alu -13 297 1 236 190 0 0 chr17 32775951 32776009 -56728544 - AluSp/q SINE Alu -1 302 245 * 315 116 0 0 chr17 32776002 32776084 -56728469 + Alu SINE Alu 241 322 0 2332 52 3 16 chr17 32776132 32776437 -56728116 + AluY SINE Alu 1 301 -10 2018 96 7 3 chr17 32776576 32776858 -56727695 + AluSx SINE Alu 1 283 -29 893 200 12 0 chr17 32777017 32777187 -56727366 - L1MC3 LINE L1 -1060 6725 6554 459 184 11 0 chr17 32777204 32777291 -56727262 - FLAM_A SINE Alu -8 134 47 207 88 0 0 chr17 32777465 32777499 -56727054 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 1856 129 7 17 chr17 32777503 32777790 -56726763 - AluSx SINE Alu -28 284 1 494 186 137 10 chr17 32777900 32778002 -56726551 + FLAM_C SINE Alu 3 117 -16 2414 77 0 0 chr17 32778009 32778320 -56726233 - AluY SINE Alu 0 311 1 2152 95 0 3 chr17 32778321 32778616 -56725937 - AluY SINE Alu -17 294 1 2201 89 10 0 chr17 32778617 32778908 -56725645 - AluSp SINE Alu -19 294 1 824 137 8 0 chr17 32779077 32779194 -56725359 - FLAM_C SINE Alu -15 118 1 511 239 99 42 chr17 32779260 32779594 -56724959 - L1MDa LINE L1 -3965 2575 2223 237 65 0 0 chr17 32779594 32779625 -56724928 + (TG)n Simple_repeat Simple_repeat 2 32 0 381 275 23 0 chr17 32779642 32779773 -56724780 + (TA)n Simple_repeat Simple_repeat 2 135 0 249 284 220 39 chr17 32779782 32780014 -56724539 + L2 LINE L2 2024 2297 -1017 959 202 90 62 chr17 32780234 32780590 -56723963 + L1MDa LINE L1 1836 2201 -4339 246 32 0 0 chr17 32780591 32780622 -56723931 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 408 233 35 35 chr17 32780623 32780739 -56723814 + MIR SINE MIR 131 246 -16 2149 114 14 0 chr17 32780739 32781029 -56723524 + AluSx SINE Alu 1 294 -18 833 148 15 0 chr17 32781212 32781349 -56723204 - FAM SINE Alu -13 172 36 417 206 122 38 chr17 32781351 32781482 -56723071 - HAL1 LINE L1 -867 1640 1499 1217 126 0 0 chr17 32781519 32781693 -56722860 - AluSg/x SINE Alu -5 307 134 465 218 59 143 chr17 32781704 32781789 -56722764 - HAL1 LINE L1 -1026 1481 1390 2281 121 0 0 chr17 32781789 32782102 -56722451 + AluSq SINE Alu 1 313 0 465 218 59 143 chr17 32782102 32782442 -56722111 - HAL1 LINE L1 -1117 1390 1092 2294 115 0 6 chr17 32782472 32782786 -56721767 + AluSp SINE Alu 1 312 -1 1926 198 27 47 chr17 32782786 32783044 -56721509 + MER63B DNA MER1_type 1 248 -814 2266 90 3 3 chr17 32783044 32783332 -56721221 + AluSq SINE Alu 1 288 -25 1926 198 27 47 chr17 32783332 32783518 -56721035 + MER63B DNA MER1_type 248 436 0 2417 72 0 0 chr17 32783562 32783853 -56720700 + AluSg SINE Alu 1 291 -19 2347 107 0 0 chr17 32784013 32784322 -56720231 - AluSx SINE Alu -3 309 1 2435 97 0 0 chr17 32784447 32784756 -56719797 - AluSg SINE Alu -1 309 1 2194 105 3 0 chr17 32784956 32785265 -56719288 - AluSp SINE Alu 0 310 1 687 122 0 0 chr17 32785415 32785513 -56719040 - AluSc SINE Alu -14 295 198 2008 73 0 8 chr17 32785586 32785833 -56718720 + AluY SINE Alu 52 296 -15 572 209 67 0 chr17 32786266 32786371 -56718182 - AluJo/FRAM SINE Alu -15 297 186 2137 125 14 0 chr17 32786371 32786667 -56717886 - AluSx SINE Alu -12 300 1 21 0 0 0 chr17 32786739 32786760 -56717793 + AT_rich Low_complexity Low_complexity 1 21 0 2630 54 0 0 chr17 32786914 32787211 -56717342 + AluSc SINE Alu 1 297 -12 2074 118 17 3 chr17 32787251 32787547 -56717006 + AluSc SINE Alu 1 300 -9 2414 76 0 3 chr17 32787547 32787848 -56716705 + AluY SINE Alu 1 300 -11 2407 71 3 3 chr17 32787868 32788164 -56716389 + AluY SINE Alu 1 296 -15 1606 101 0 0 chr17 32788323 32788521 -56716032 + AluSg SINE Alu 1 198 -112 1206 120 0 0 chr17 32788521 32788679 -56715874 + AluSg/x SINE Alu 140 297 -15 2125 138 0 0 chr17 32788863 32789168 -56715385 + AluSx SINE Alu 1 305 -7 256 316 35 26 chr17 32789698 32789812 -56714741 - MIR SINE MIR -138 124 10 2106 96 0 58 chr17 32790125 32790266 -56714287 + AluY SINE Alu 1 116 -195 2355 79 0 13 chr17 32790266 32790571 -56713982 + AluY SINE Alu 1 301 -10 2106 96 0 58 chr17 32790571 32790742 -56713811 + AluY SINE Alu 116 295 -16 2447 54 3 3 chr17 32790871 32791166 -56713387 - AluY SINE Alu -15 296 2 2453 57 20 0 chr17 32791567 32791863 -56712690 - AluY SINE Alu -9 302 1 2176 124 3 0 chr17 32791863 32792161 -56712392 - AluSx SINE Alu -13 299 1 1747 154 31 11 chr17 32792161 32792447 -56712106 - AluJo SINE Alu -20 292 1 2076 138 0 0 chr17 32792646 32792950 -56711603 - AluSx SINE Alu -8 304 1 2036 124 7 23 chr17 32793199 32793498 -56711055 - AluSx SINE Alu -18 294 1 1610 211 0 0 chr17 32793498 32793795 -56710758 - AluJo SINE Alu -14 298 1 2310 100 0 0 chr17 32793799 32794099 -56710454 - AluSc SINE Alu -9 300 1 2198 99 0 14 chr17 32794136 32794448 -56710105 - AluSg SINE Alu 0 310 1 383 276 52 9 chr17 32794571 32794687 -56709866 - L2 LINE L2 -18 3254 3134 452 234 0 19 chr17 32795065 32795172 -56709381 - FRAM SINE Alu -6 170 66 900 209 16 6 chr17 32795183 32795365 -56709188 - AluJo SINE Alu -7 305 122 1303 218 3 43 chr17 32795377 32795552 -56709001 - AluJo SINE Alu -21 291 131 2074 114 0 7 chr17 32795552 32795841 -56708712 + AluSg SINE Alu 1 287 -23 1303 218 3 43 chr17 32795841 32795968 -56708585 - AluJo SINE Alu -181 131 1 2372 65 3 7 chr17 32796004 32796298 -56708255 - AluY SINE Alu -18 293 1 1777 106 83 4 chr17 32796308 32796573 -56707980 - AluSc SINE Alu -23 286 1 183 80 0 0 chr17 32796980 32797005 -56707548 + (CGG)n Simple_repeat Simple_repeat 1 25 0 190 250 0 0 chr17 32797703 32797751 -56706802 - MIR SINE MIR -118 144 97 795 161 0 0 chr17 32798941 32799071 -56705482 + FLAM_A SINE Alu 4 133 0 2245 90 7 13 chr17 32799178 32799479 -56705074 - AluSp SINE Alu -14 299 1 2202 121 10 0 chr17 32800384 32800682 -56703871 + AluSx SINE Alu 1 301 -11 849 93 54 0 chr17 32800750 32800879 -56703674 - AluY SINE Alu 0 311 176 2202 122 3 0 chr17 32800906 32801210 -56703343 - AluSq SINE Alu -8 305 1 2121 116 0 0 chr17 32801210 32801502 -56703051 - AluY SINE Alu -19 292 1 2230 94 10 3 chr17 32801507 32801804 -56702749 - AluSq SINE Alu -14 299 1 2186 127 0 3 chr17 32801975 32802289 -56702264 - AluSq SINE Alu 0 313 1 1582 139 24 98 chr17 32802896 32803306 -56701247 - MER58D DNA MER1_type -6 380 1 2274 100 10 0 chr17 32803359 32803648 -56700905 - AluSg SINE Alu -18 292 1 22 0 0 0 chr17 32803720 32803742 -56700811 + AT_rich Low_complexity Low_complexity 1 22 0 2290 104 3 0 chr17 32803771 32804080 -56700473 - AluSq SINE Alu -3 310 1 1814 171 0 13 chr17 32804086 32804385 -56700168 - AluJb SINE Alu -17 295 1 797 187 0 0 chr17 32804410 32804544 -56700009 - LTR26B LTR ERV1 0 531 398 2129 128 7 0 chr17 32804549 32804845 -56699708 + AluSx SINE Alu 5 302 -10 22 35 0 0 chr17 32804845 32804874 -56699679 + AT_rich Low_complexity Low_complexity 1 29 0 1162 118 56 130 chr17 32804874 32805144 -56699409 - LTR26E LTR ERV1 -123 499 250 2402 97 7 0 chr17 32805144 32805454 -56699099 + AluSx SINE Alu 1 312 0 365 287 112 7 chr17 32806839 32806982 -56697571 - MER5A DNA MER1_type 0 189 32 234 271 215 0 chr17 32807022 32807129 -56697424 - MER5A DNA MER1_type -6 183 54 1655 168 44 0 chr17 32807790 32808087 -56696466 + AluJo SINE Alu 1 310 -2 1649 111 157 0 chr17 32808353 32808615 -56695938 + AluSp SINE Alu 1 303 0 1440 151 68 127 chr17 32809088 32809189 -56695364 + MER7A DNA MER2_type 1 106 -2932 2054 145 0 0 chr17 32809189 32809492 -56695061 - AluSx SINE Alu -7 305 3 1440 151 68 127 chr17 32809492 32809760 -56694793 + MER7A DNA MER2_type 106 346 0 22 35 0 0 chr17 32809952 32809981 -56694572 + AT_rich Low_complexity Low_complexity 1 29 0 2040 116 27 0 chr17 32810119 32810411 -56694142 - AluSq SINE Alu -13 300 1 198 0 0 0 chr17 32811104 32811126 -56693427 + (CACCC)n Simple_repeat Simple_repeat 3 24 0 2435 86 0 3 chr17 32813384 32813686 -56690867 - AluSp SINE Alu -12 301 1 798 213 102 0 chr17 32813743 32813968 -56690585 + MIR SINE MIR 13 260 -2 194 91 30 0 chr17 32814332 32814365 -56690188 + T-rich Low_complexity Low_complexity 5 38 0 1299 136 0 0 chr17 32815753 32815930 -56688623 - AluSq SINE Alu -136 177 1 271 282 94 54 chr17 32815961 32816110 -56688443 + L1ME2 LINE L1 5961 6115 -49 618 193 18 0 chr17 32816110 32816224 -56688329 + FLAM_C SINE Alu 1 116 -17 261 0 0 0 chr17 32816226 32816255 -56688298 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 570 228 0 0 chr17 32816517 32816767 -56687786 + (TG)n Simple_repeat Simple_repeat 1 250 0 249 305 0 48 chr17 32817039 32817144 -56687409 + MIR3 SINE MIR 106 205 -3 736 225 84 11 chr17 32817326 32817504 -56687049 + MER58C DNA MER1_type 15 205 -10 2201 98 11 0 chr17 32818161 32818483 -56686070 - AluY SINE Alu 0 325 1 522 258 23 0 chr17 32818991 32819119 -56685434 - MER5A DNA MER1_type -22 167 37 1079 203 33 0 chr17 32820108 32820320 -56684233 + MER20 DNA MER1_type 1 219 0 986 125 13 13 chr17 32820910 32821062 -56683491 + AluSx SINE Alu 2 153 -159 1701 111 58 0 chr17 32821184 32821427 -56683126 + AluSq SINE Alu 1 257 -56 676 85 0 21 chr17 32821432 32821526 -56683027 - AluS SINE Alu -219 93 2 2114 112 0 0 chr17 32822067 32822344 -56682209 + AluSx SINE Alu 1 277 -35 820 129 9 0 chr17 32822347 32822463 -56682090 - AluSq/x SINE Alu -195 117 1 426 190 25 16 chr17 32822485 32822606 -56681947 + GA-rich Low_complexity Low_complexity 3 124 0 743 191 7 0 chr17 32822664 32822805 -56681748 + MIR SINE MIR 49 190 -72 384 307 80 7 chr17 32823059 32823196 -56681357 - L2 LINE L2 0 3272 3126 2196 115 0 7 chr17 32823405 32823710 -56680843 + AluSx SINE Alu 1 303 -9 200 205 26 51 chr17 32823837 32823915 -56680638 + T-rich Low_complexity Low_complexity 2 77 0 311 234 55 28 chr17 32824885 32824900 -56679653 - L1MA10 LINE L1 0 6334 6320 2180 162 20 53 chr17 32824900 32825191 -56679362 - L1ME1 LINE L1 -5 6161 5862 1983 136 35 0 chr17 32825191 32825478 -56679075 - AluSx SINE Alu -15 297 1 2180 162 20 53 chr17 32825478 32825538 -56679015 - L1ME1 LINE L1 -304 5862 5802 949 209 169 33 chr17 32825538 32825840 -56678713 - MER2 DNA MER2_type 0 344 2 2180 162 20 53 chr17 32825840 32825943 -56678610 - L1ME1 LINE L1 -364 5802 5721 1745 97 4 0 chr17 32826048 32826274 -56678279 - AluSp SINE Alu -86 227 1 348 254 0 0 chr17 32826526 32826593 -56677960 + AluJo SINE Alu 1 67 -235 1215 173 31 9 chr17 32826705 32826931 -56677622 + AluJo SINE Alu 75 305 -7 2171 126 7 3 chr17 32828098 32828408 -56676145 + AluSq SINE Alu 1 311 -2 204 336 107 33 chr17 32829000 32829122 -56675431 - L2 LINE L2 -5 3267 3137 419 284 0 17 chr17 32829625 32829741 -56674812 - L3 LINE CR1 -20 1557 1444 22 35 0 0 chr17 32830520 32830549 -56674004 + AT_rich Low_complexity Low_complexity 1 29 0 755 153 153 13 chr17 32831358 32831508 -56673045 - AluSq SINE Alu -6 307 137 2175 131 7 0 chr17 32831526 32831832 -56672721 - AluSx SINE Alu -4 308 1 215 268 143 36 chr17 32833380 32833492 -56671061 + MIR SINE MIR 8 132 -76 237 306 0 28 chr17 32833498 32833570 -56670983 + MIR SINE MIR 2 71 -191 2131 119 10 3 chr17 32833583 32833878 -56670675 - AluSx SINE Alu -14 298 2 218 204 0 0 chr17 32834384 32834433 -56670120 + T-rich Low_complexity Low_complexity 1 49 0 395 188 0 0 chr17 32835129 32835193 -56669360 - MER2 DNA MER2_type 0 345 282 * 793 264 6 6 chr17 32835168 32835346 -56669207 - MER8 DNA MER2_type -60 179 2 3664 170 83 38 chr17 32835556 32836367 -56668186 + L1MC3 LINE L1 6939 7785 0 1771 189 48 3 chr17 32836587 32836920 -56667633 + MER7A DNA MER2_type 1 346 0 2332 83 3 13 chr17 32836945 32837257 -56667296 + AluY SINE Alu 1 309 -2 2315 95 0 10 chr17 32837887 32838191 -56666362 - AluSp SINE Alu -12 301 1 785 218 102 0 chr17 32838248 32838473 -56666080 + MIR SINE MIR 13 260 -2 210 118 0 0 chr17 32838837 32838871 -56665682 + (TTTTA)n Simple_repeat Simple_repeat 5 38 0 1873 178 3 0 chr17 32839787 32840096 -56664457 - AluJb SINE Alu -2 310 1 415 277 225 54 chr17 32840283 32840839 -56663714 - L1MC4a LINE L1 -1874 5934 5284 1330 150 0 10 chr17 32840986 32841186 -56663367 + AluSq SINE Alu 2 199 -114 2042 145 0 0 chr17 32841186 32841483 -56663070 - AluSq SINE Alu -16 297 1 292 227 56 82 chr17 32841514 32841663 -56662890 + L1ME3A LINE L1 5961 6115 -47 654 175 18 0 chr17 32841663 32841777 -56662776 + FLAM_C SINE Alu 1 116 -17 261 0 0 0 chr17 32841779 32841808 -56662745 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 693 199 0 0 chr17 32842065 32842298 -56662255 + (TG)n Simple_repeat Simple_repeat 1 233 0 248 303 0 15 chr17 32842645 32842711 -56661842 + L3 LINE CR1 1512 1576 -1 571 241 97 7 chr17 32842895 32843040 -56661513 + MER58C DNA MER1_type 15 172 -43 744 82 0 0 chr17 32843188 32843285 -56661268 + AluSg/x SINE Alu 208 304 -5 337 253 0 23 chr17 32843286 32843373 -56661180 + GA-rich Low_complexity Low_complexity 1 85 0 372 183 56 0 chr17 32843385 32843456 -56661097 + MER58B DNA MER1_type 264 338 -3 953 207 62 0 chr17 32843479 32843687 -56660866 + MER58A DNA MER1_type 4 224 0 239 286 29 9 chr17 32844070 32844175 -56660378 + L1ME4a LINE L1 6006 6112 -9 502 210 172 6 chr17 32844414 32844571 -56659982 + MER5A DNA MER1_type 4 186 -3 2183 116 7 0 chr17 32844711 32845003 -56659550 + AluSx SINE Alu 1 294 -18 249 57 0 0 chr17 32845003 32845038 -56659515 + (CA)n Simple_repeat Simple_repeat 2 36 0 1651 170 0 44 chr17 32845344 32845638 -56658915 + AluJo SINE Alu 1 281 -31 320 270 126 0 chr17 32845845 32845956 -56658597 - MIR SINE MIR -78 184 60 1560 163 50 0 chr17 32846260 32846537 -56658016 + L1MB3 LINE L1 5872 6162 -21 1677 139 82 11 chr17 32846544 32846811 -56657742 - AluJo SINE Alu -26 286 1 304 97 0 48 chr17 32846815 32846877 -56657676 + L1MB4 LINE L1 6116 6174 -6 394 258 223 6 chr17 32846949 32847128 -56657425 - MIR SINE MIR -10 252 37 280 227 142 39 chr17 32847560 32847695 -56656858 + MIR SINE MIR 10 154 -59 868 160 91 5 chr17 32847721 32847908 -56656645 + MIR SINE MIR 28 230 -32 411 145 0 0 chr17 32847935 32848004 -56656549 + (TA)n Simple_repeat Simple_repeat 2 70 0 237 256 73 0 chr17 32848511 32848593 -56655960 - MIR SINE MIR -110 152 65 1925 142 25 4 chr17 32848620 32848901 -56655652 + AluSx SINE Alu 1 287 -25 289 316 1 0 chr17 32848985 32849082 -56655471 + MIR SINE MIR 62 145 -63 266 233 346 15 chr17 32849118 32849251 -56655302 + MER69A DNA AcHobo 1 177 0 1979 163 0 0 chr17 32849329 32849623 -56654930 + AluJb SINE Alu 1 294 -18 480 239 0 52 chr17 32849690 32849824 -56654729 + L2 LINE L2 3172 3298 -15 258 250 138 0 chr17 32849827 32849943 -56654610 - MIR3 SINE MIR -35 173 42 2323 110 3 3 chr17 32850042 32850352 -56654201 + AluSx SINE Alu 1 310 -2 2082 155 0 0 chr17 32850361 32850670 -56653883 + AluJb SINE Alu 1 309 -3 2108 133 0 20 chr17 32850670 32850971 -56653582 + AluSx SINE Alu 1 295 -17 734 214 21 16 chr17 32851008 32851195 -56653358 + MER53 DNA DNA 2 189 0 408 230 68 68 chr17 32851219 32851281 -56653272 + MIR SINE MIR 52 113 -149 2371 143 25 3 chr17 32851281 32851638 -56652915 + MLT1A1 LTR MaLR 1 365 0 408 230 68 68 chr17 32851638 32851723 -56652830 + MIR SINE MIR 112 199 -63 270 212 88 77 chr17 32851919 32851957 -56652596 - MER20B DNA MER1_type -6 777 741 1829 157 3 32 chr17 32851957 32852269 -56652284 - AluSx SINE Alu -6 306 4 270 212 88 77 chr17 32852269 32852400 -56652153 - MER20B DNA MER1_type -42 741 606 370 149 81 0 chr17 32852497 32852571 -56651982 + MER116 DNA Mariner 1 80 0 860 241 61 110 chr17 32852662 32853190 -56651363 - MER20B DNA MER1_type -279 504 3 181 308 0 0 chr17 32853199 32853238 -56651315 - L3 LINE CR1 -109 1468 1430 261 0 0 0 chr17 32853567 32853596 -56650957 + (TG)n Simple_repeat Simple_repeat 1 29 0 497 278 162 32 chr17 32853618 32853834 -56650719 + MIR SINE MIR 13 256 -6 978 173 46 115 chr17 32854789 32855112 -56649441 - AluJo SINE Alu 0 302 2 2139 126 3 0 chr17 32855460 32855753 -56648800 + AluSg SINE Alu 1 294 -16 1727 148 7 38 chr17 32855935 32856273 -56648280 + AluJb SINE Alu 2 330 0 508 130 0 0 chr17 32856476 32856553 -56648000 - AluSx SINE Alu -6 305 229 6590 72 5 2 chr17 32856553 32857377 -56647176 + LTR12 LTR ERV1 1 826 0 62657 88 8 16 chr17 32857377 32865849 -56638704 + HERV9 LTR ERV1 1 8399 0 5063 52 0 133 chr17 32865849 32866643 -56637910 + LTR12 LTR ERV1 1 688 0 1850 99 0 0 chr17 32866643 32866876 -56637677 - AluSx SINE Alu -79 233 1 239 237 93 25 chr17 32867137 32867255 -56637298 + L1ME4a LINE L1 5923 6048 -73 2178 131 0 0 chr17 32867257 32867554 -56636999 - AluSx SINE Alu -15 297 1 876 254 126 47 chr17 32868084 32868261 -56636292 + L1ME4a LINE L1 5388 5550 -571 2197 107 7 0 chr17 32868261 32868552 -56636001 + AluSx SINE Alu 1 293 -19 876 254 126 47 chr17 32868552 32868986 -56635567 + L1ME4a LINE L1 5550 6050 -71 313 230 75 31 chr17 32868982 32868998 -56635555 - L1MD3 LINE L1 -1 8040 8026 * 2069 122 4 0 chr17 32868998 32869303 -56635250 + AluSg SINE Alu 1 306 0 313 230 75 31 chr17 32869303 32869850 -56634703 - L1MD3 LINE L1 -15 8026 7504 249 83 0 0 chr17 32869850 32869886 -56634667 + (CAAAA)n Simple_repeat Simple_repeat 4 39 0 313 230 75 31 chr17 32869886 32870553 -56634000 - L1MD3 LINE L1 -537 7504 6765 246 147 0 0 chr17 32870556 32870590 -56633963 + Alu SINE Alu 1 34 -267 544 206 135 0 chr17 32871395 32871521 -56633032 + MLT2B1 LTR ERVL 1 143 -377 441 68 123 0 chr17 32871650 32871723 -56632830 + L1MB4 LINE L1 6095 6176 -4 1861 139 3 21 chr17 32871993 32872311 -56632242 + AluJb SINE Alu 1 313 0 2162 118 20 0 chr17 32872361 32872666 -56631887 + AluSx SINE Alu 2 312 0 276 154 0 0 chr17 32872666 32872718 -56631835 + GA-rich Low_complexity Low_complexity 1 52 0 582 232 28 50 chr17 32872720 32872901 -56631652 + MER104 DNA MER2_type 1 177 -3 265 103 0 0 chr17 32873608 32873647 -56630906 - MER53 DNA DNA -149 40 2 1978 180 100 27 chr17 32873885 32874334 -56630219 + MLT1D LTR MaLR 1 482 -23 583 224 82 0 chr17 32874334 32874468 -56630085 + MER45A DNA AcHobo 32 176 -2 314 333 51 17 chr17 32875239 32875356 -56629197 + MLT2E LTR ERVL 39 159 -469 573 161 0 0 chr17 32875446 32875533 -56629020 + L1PA4 LINE L1 10 96 -6365 * 38112 53 6 2 chr17 32875500 32881055 -56623498 + L1PA4 LINE L1 893 6467 -3 32 0 0 0 chr17 32881068 32881100 -56623453 + AT_rich Low_complexity Low_complexity 1 32 0 477 0 0 0 chr17 32881759 32881812 -56622741 + (ATG)n Simple_repeat Simple_repeat 2 54 0 665 271 104 14 chr17 32881812 32882033 -56622520 - MIR SINE MIR -3 259 19 319 216 52 164 chr17 32882043 32882256 -56622297 + MIR SINE MIR 52 240 -22 234 162 0 0 chr17 32882544 32882581 -56621972 + MER91 DNA MER1_type 1 37 -153 189 340 0 0 chr17 32882711 32882758 -56621795 + L2 LINE L2 3267 3313 0 313 206 134 10 chr17 32883557 32883654 -56620899 + MIR SINE MIR 84 192 -70 1632 160 24 3 chr17 32883790 32884105 -56620448 + AluSx SINE Alu 1 312 0 815 128 143 0 chr17 32884105 32884261 -56620292 + AluSg/x SINE Alu 134 308 0 232 167 67 25 chr17 32885063 32885163 -56619390 + L1MC5 LINE L1 7585 7692 -269 1502 195 13 10 chr17 32885163 32885470 -56619083 - AluJo SINE Alu -4 308 1 232 167 67 25 chr17 32885470 32885489 -56619064 + L1MC5 LINE L1 7692 7709 -252 2005 137 3 3 chr17 32885874 32886181 -56618372 - AluSx SINE Alu -5 307 1 870 250 31 25 chr17 32886187 32886509 -56618044 + L1MEc LINE L1 5 394 -6002 546 291 183 27 chr17 32886517 32887144 -56617409 + L2 LINE L2 2538 3264 -8 180 0 0 0 chr17 32887308 32887328 -56617225 + (TG)n Simple_repeat Simple_repeat 1 20 0 704 188 100 6 chr17 32887366 32887526 -56617027 - MER5B DNA MER1_type -3 175 1 262 227 76 0 chr17 32887547 32887613 -56616940 + L2 LINE L2 2980 3050 -222 261 308 15 0 chr17 32887703 32887768 -56616785 + L2 LINE L2 3247 3312 -1 4202 13 2 0 chr17 32888214 32888687 -56615866 + L1PA2 LINE L1 5682 6155 0 216 0 0 0 chr17 32888699 32888723 -56615830 + (A)n Simple_repeat Simple_repeat 1 24 0 505 203 16 128 chr17 32888825 32889012 -56615541 - MER5B DNA MER1_type -12 166 1 285 284 336 8 chr17 32889103 32889237 -56615316 + MER5B DNA MER1_type 1 178 0 914 179 0 0 chr17 32889340 32889491 -56615062 - FRAM SINE Alu -16 160 10 1743 181 0 10 chr17 32889528 32889837 -56614716 - AluJb SINE Alu -5 307 2 2254 94 0 7 chr17 32889846 32890153 -56614400 - AluSp SINE Alu -8 305 1 216 322 56 35 chr17 32890205 32890348 -56614205 - MER5A DNA MER1_type 0 189 44 * 287 292 67 33 chr17 32890230 32890350 -56614203 + MER5A DNA MER1_type 36 159 -30 1855 129 4 0 chr17 32890427 32890705 -56613848 + AluSx SINE Alu 1 279 -33 285 98 0 0 chr17 32890706 32890747 -56613806 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 187 285 35 130 chr17 32891313 32891744 -56612809 - L2 LINE L2 -41 3231 2842 2018 121 0 29 chr17 32891843 32892015 -56612538 - AluSx SINE Alu -7 305 145 2411 77 0 0 chr17 32892015 32892326 -56612227 - AluSp SINE Alu -2 311 1 2018 121 0 29 chr17 32892326 32892467 -56612086 - AluSx SINE Alu -167 145 1 2126 100 0 19 chr17 32893091 32893401 -56611152 + AluSx SINE Alu 1 304 -8 1253 204 84 0 chr17 32893595 32893894 -56610659 - MER33 DNA MER1_type 0 324 1 1649 100 100 33 chr17 32894178 32894449 -56610104 + AluSg SINE Alu 1 289 -21 2540 145 5 0 chr17 32894524 32894910 -56609643 - MLT1B LTR MaLR -2 388 1 1881 139 4 4 chr17 32894947 32895252 -56609301 + AluJo SINE Alu 1 305 0 204 311 170 0 chr17 32896243 32896349 -56608204 + L2 LINE L2 3185 3308 -5 330 244 33 11 chr17 32897234 32897324 -56607229 - LTR67 LTR ERVL -368 189 98 282 130 304 0 chr17 32897392 32897461 -56607092 + L1MB3 LINE L1 6051 6140 -43 848 102 8 16 chr17 32897463 32897590 -56606963 + AluJb SINE Alu 1 126 -186 1827 122 0 48 chr17 32897592 32897738 -56606815 + AluJb SINE Alu 1 126 -186 1893 102 39 39 chr17 32897738 32898043 -56606510 + AluY SINE Alu 1 305 -6 1827 122 0 48 chr17 32898043 32898208 -56606345 + AluJb SINE Alu 126 297 -15 2008 108 3 7 chr17 32899256 32899543 -56605010 + AluSp SINE Alu 3 288 -25 32 26 0 0 chr17 32899543 32899582 -56604971 + AT_rich Low_complexity Low_complexity 1 39 0 2284 76 0 0 chr17 32899797 32900099 -56604454 - AluY SINE Alu -9 302 1 1641 162 0 72 chr17 32900478 32900812 -56603741 + AluJo SINE Alu 1 310 -2 1908 133 4 14 chr17 32900967 32901245 -56603308 + MER1A DNA MER1_type 56 330 -199 2098 98 0 33 chr17 32901250 32901556 -56602997 + AluSg SINE Alu 1 296 -14 792 151 0 0 chr17 32901556 32901675 -56602878 + MER1A DNA MER1_type 415 533 0 1663 165 17 7 chr17 32901737 32902034 -56602519 - AluJo SINE Alu -10 302 3 294 50 0 0 chr17 32902036 32902076 -56602477 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2083 97 0 0 chr17 32902076 32902354 -56602199 - AluSx SINE Alu -29 283 6 2349 74 0 0 chr17 32902723 32903045 -56601508 - AluY SINE Alu 0 311 1 371 319 21 27 chr17 32903277 32903465 -56601088 - LTR16B LTR ERVL 0 464 278 270 322 11 11 chr17 32903505 32903592 -56600961 - LTR16B LTR ERVL -247 217 131 257 132 53 0 chr17 32903636 32903674 -56600879 + Alu SINE Alu 1 40 -268 1802 145 30 3 chr17 32903692 32903858 -56600695 - AluSx SINE Alu 0 312 133 1945 94 0 57 chr17 32903858 32904155 -56600398 - AluSx SINE Alu -32 280 1 1802 145 30 3 chr17 32904155 32904292 -56600261 - AluSx SINE Alu -179 133 1 694 135 19 0 chr17 32904292 32904396 -56600157 + FLAM_C SINE Alu 26 131 -12 298 310 50 0 chr17 32904412 32904512 -56600041 - LTR16A LTR ERVL -336 114 10 2290 81 7 0 chr17 32904662 32904958 -56599595 - AluSq SINE Alu -15 298 1 27 0 0 0 chr17 32905082 32905109 -56599444 + AT_rich Low_complexity Low_complexity 1 27 0 281 294 32 48 chr17 32905192 32905318 -56599235 + MIR SINE MIR 15 138 -124 246 279 0 0 chr17 32905403 32905471 -56599082 + MARNA DNA Mariner 321 388 -198 2827 163 16 51 chr17 32905513 32906021 -56598532 + L1MB3 LINE L1 5624 6148 -35 2106 85 3 0 chr17 32906021 32906303 -56598250 + AluSc SINE Alu 9 291 -18 2827 163 16 51 chr17 32906303 32906314 -56598239 + L1MB3 LINE L1 6148 6158 -25 2033 119 0 10 chr17 32906314 32906608 -56597945 + AluSx SINE Alu 1 291 -21 2827 163 16 51 chr17 32906608 32906658 -56597895 + L1MB3 LINE L1 6158 6174 -9 21 0 0 0 chr17 32906658 32906679 -56597874 + AT_rich Low_complexity Low_complexity 1 21 0 1532 150 0 81 chr17 32906697 32907028 -56597525 - AluJb SINE Alu 0 306 1 22 35 0 0 chr17 32907124 32907153 -56597400 + AT_rich Low_complexity Low_complexity 1 29 0 2186 127 48 25 chr17 32907160 32907334 -56597219 + THE1B LTR MaLR 3 172 -192 2184 110 0 0 chr17 32907334 32907633 -56596920 + AluSx SINE Alu 1 299 -13 2186 127 48 25 chr17 32907633 32907812 -56596741 + THE1B LTR MaLR 172 364 0 21 0 0 0 chr17 32907825 32907846 -56596707 + AT_rich Low_complexity Low_complexity 1 21 0 305 329 90 7 chr17 32908440 32908595 -56595958 + MIR SINE MIR 83 250 -12 2104 121 0 0 chr17 32908724 32909031 -56595522 + AluSx SINE Alu 1 307 -5 1910 139 0 7 chr17 32909066 32909367 -56595186 + AluJb SINE Alu 5 303 -9 1950 120 0 7 chr17 32909553 32909870 -56594683 - AluSx SINE Alu 0 315 1 560 243 81 0 chr17 32909910 32910058 -56594495 - MLT1J2 LTR MaLR -38 412 253 1659 143 15 80 chr17 32910198 32910317 -56594236 + L1ME LINE L1 5211 5336 -830 2346 80 0 0 chr17 32910317 32910617 -56593936 + AluY SINE Alu 1 300 -11 1659 143 15 80 chr17 32910617 32910781 -56593772 + L1ME LINE L1 5336 5456 -710 2124 99 3 7 chr17 32910781 32911075 -56593478 + AluSg1 SINE Alu 1 293 -16 1659 143 15 80 chr17 32911075 32911204 -56593349 + L1ME LINE L1 5456 5592 -574 520 263 133 26 chr17 32911395 32911711 -56592842 + L1M4 LINE L1 4035 4410 -1736 599 230 32 0 chr17 32911711 32911837 -56592716 + FLAM_A SINE Alu 4 133 0 520 263 133 26 chr17 32911837 32911950 -56592603 + L1M4 LINE L1 4410 4510 -1636 1975 141 3 0 chr17 32912005 32912304 -56592249 + AluSq SINE Alu 1 300 -13 373 249 75 17 chr17 32912314 32912487 -56592066 + Zaphod DNA AcHobo 3677 3859 -172 1781 162 13 3 chr17 32912487 32912789 -56591764 - AluJo SINE Alu -7 305 1 2044 135 0 0 chr17 32913091 32913394 -56591159 + AluSx SINE Alu 1 303 -9 281 160 20 0 chr17 32913458 32913508 -56591045 + MER66B LTR ERV1 295 345 -141 2063 119 3 0 chr17 32913549 32913844 -56590709 + AluSx SINE Alu 1 296 -16 1593 168 63 58 chr17 32914019 32914401 -56590152 + MLT1B LTR MaLR 7 390 0 190 274 67 74 chr17 32914454 32914589 -56589964 + L2 LINE L2 2547 2680 -634 297 279 62 90 chr17 32914872 32914917 -56589636 - MLT1K LTR MaLR -199 389 344 2027 116 0 20 chr17 32914917 32915219 -56589334 + AluJb SINE Alu 1 296 -16 297 279 62 90 chr17 32915219 32915417 -56589136 - MLT1K LTR MaLR -244 344 153 453 282 100 70 chr17 32915957 32916122 -56588431 + L1ME4a LINE L1 5488 5647 -474 1964 129 7 3 chr17 32916122 32916417 -56588136 + AluSx SINE Alu 1 296 -16 1884 104 4 8 chr17 32916423 32916691 -56587862 + AluSx SINE Alu 44 310 -2 453 282 100 70 chr17 32916691 32916848 -56587705 + L1ME4a LINE L1 5651 5827 -294 * 609 262 122 66 chr17 32916835 32916899 -56587654 + L1MC4a LINE L1 5328 5387 -734 2096 90 0 48 chr17 32916899 32917064 -56587489 - AluSg SINE Alu -15 295 150 1812 102 13 70 chr17 32917064 32917378 -56587175 - AluY SINE Alu -14 297 2 2096 90 0 48 chr17 32917378 32917522 -56587031 - AluSg SINE Alu -160 150 1 609 262 122 66 chr17 32917522 32918018 -56586535 + L1MC4a LINE L1 5387 5889 -232 2157 116 0 0 chr17 32918362 32918663 -56585890 + AluSx SINE Alu 1 301 -11 1354 154 5 0 chr17 32918768 32918989 -56585564 - AluJb SINE Alu -4 308 87 29 47 0 0 chr17 32919012 32919055 -56585498 + AT_rich Low_complexity Low_complexity 1 43 0 574 236 20 14 chr17 32919335 32919483 -56585070 + L1ME4a LINE L1 5548 5696 -425 447 287 168 22 chr17 32919498 32919766 -56584787 + L1ME4a LINE L1 5803 6109 -12 349 254 296 18 chr17 32919891 32920060 -56584493 - MIR SINE MIR 0 262 47 492 294 130 17 chr17 32920073 32920304 -56584249 - MIR SINE MIR 0 262 6 754 164 0 16 chr17 32920399 32920527 -56584026 + FLAM_C SINE Alu 2 127 -16 899 253 120 29 chr17 32921121 32921496 -56583057 + L1ME3 LINE L1 5478 5886 -276 1677 157 45 0 chr17 32921861 32922147 -56582406 + AluJb SINE Alu 1 299 -13 494 240 143 10 chr17 32922296 32922497 -56582056 + MIR SINE MIR 7 236 -26 470 168 53 26 chr17 32922515 32922628 -56581925 + L1MC3 LINE L1 7365 7480 -305 * 1237 154 99 4 chr17 32922621 32922874 -56581679 + L1MB3 LINE L1 5894 6170 -13 2134 116 0 0 chr17 32922877 32923179 -56581374 - AluSx SINE Alu -10 302 1 1304 177 49 4 chr17 32923216 32923481 -56581072 + L1MC3 LINE L1 7465 7741 -44 1808 155 28 0 chr17 32923498 32923788 -56580765 - AluJb SINE Alu -14 298 1 591 137 11 0 chr17 32923811 32923906 -56580647 - L1MB3 LINE L1 -12 6171 6076 45 93 0 6 chr17 32923940 32923967 -56580586 + AT_rich Low_complexity Low_complexity 1 27 -133 1983 138 0 0 chr17 32923967 32924257 -56580296 - AluSx SINE Alu -22 290 1 45 93 0 6 chr17 32924257 32924390 -56580163 + AT_rich Low_complexity Low_complexity 27 160 0 294 182 61 0 chr17 32924390 32924489 -56580064 + (TA)n Simple_repeat Simple_repeat 2 106 0 2115 119 7 0 chr17 32924536 32924846 -56579707 + AluSx SINE Alu 1 312 0 341 247 70 12 chr17 32925253 32925399 -56579154 - MIR SINE MIR -61 147 28 365 259 141 83 chr17 32925450 32925918 -56578635 + L1MEd LINE L1 2 496 -5623 1835 238 80 124 chr17 32925956 32926253 -56578300 - L2 LINE L2 -290 3023 2714 230 125 50 0 chr17 32926253 32926293 -56578260 + L1ME LINE L1 5523 5564 -606 1835 238 80 124 chr17 32926293 32926661 -56577892 - L2 LINE L2 -599 2714 2331 3981 119 49 62 chr17 32926661 32927022 -56577531 - LTR12 LTR ERV1 0 688 339 2008 93 0 11 chr17 32927022 32927302 -56577251 - AluY SINE Alu -12 299 23 3981 119 49 62 chr17 32927302 32927636 -56576917 - LTR12 LTR ERV1 -349 339 2 1769 113 4 22 chr17 32927637 32927742 -56576811 + AluSp SINE Alu 31 136 -177 2181 84 0 23 chr17 32927742 32928051 -56576502 + AluY SINE Alu 1 302 -9 1769 113 4 22 chr17 32928051 32928220 -56576333 + AluSp SINE Alu 136 300 -13 1835 238 80 124 chr17 32928220 32928251 -56576302 - L2 LINE L2 -982 2331 2300 2069 99 3 14 chr17 32928251 32928575 -56575978 - AluSg SINE Alu 0 310 1 1835 238 80 124 chr17 32928575 32928636 -56575917 - L2 LINE L2 -1013 2300 2238 1620 184 7 16 chr17 32928636 32928941 -56575612 + AluJb SINE Alu 1 302 -10 1835 238 80 124 chr17 32928941 32929225 -56575328 - L2 LINE L2 -1075 2238 1989 1639 159 3 20 chr17 32929270 32929572 -56574981 + AluSx SINE Alu 2 298 -14 457 183 30 17 chr17 32929636 32929752 -56574801 + L1MC3 LINE L1 7364 7689 -306 233 333 0 14 chr17 32929755 32929824 -56574729 - L2 LINE L2 -1418 1896 1829 1354 229 45 64 chr17 32929853 32929918 -56574635 + L1ME3A LINE L1 5470 5535 -635 2178 114 0 0 chr17 32929918 32930216 -56574337 - AluSx SINE Alu -14 298 1 2242 96 0 0 chr17 32930223 32930516 -56574037 - AluSg SINE Alu -17 293 1 1354 229 45 64 chr17 32930516 32930865 -56573688 + L1ME3A LINE L1 5541 5884 -286 512 202 10 0 chr17 32930862 32930966 -56573587 + L1MA4A LINE L1 6017 6121 -182 * 1437 138 22 0 chr17 32930967 32931198 -56573355 - AluJb SINE Alu -10 302 67 253 88 0 0 chr17 32931226 32931260 -56573293 - L1MA4A LINE L1 -154 6149 6116 835 156 0 0 chr17 32931264 32931392 -56573161 + AluJb SINE Alu 3 130 -182 2193 146 5 61 chr17 32931392 32931467 -56573086 + L1MB5 LINE L1 5759 5837 -337 1854 125 19 29 chr17 32931467 32931780 -56572773 + AluSx SINE Alu 1 310 -2 2193 146 5 61 chr17 32931780 32932130 -56572423 + L1MB5 LINE L1 5837 6160 -14 484 138 85 0 chr17 32932042 32932136 -56572417 + L1MB4 LINE L1 6076 6177 -3 414 275 58 47 chr17 32932139 32932310 -56572243 + L1ME3A LINE L1 5940 6112 -58 880 284 101 3 chr17 32932311 32932667 -56571886 - L2 LINE L2 -1506 1808 1418 218 325 119 1 chr17 32932677 32932795 -56571758 - MIR SINE MIR -61 147 23 363 277 12 0 chr17 32932933 32933016 -56571537 - L1MC4 LINE L1 -1339 6703 6620 360 255 0 43 chr17 32932945 32933039 -56571514 + L1MC4 LINE L1 6614 6703 -1339 * 413 250 81 15 chr17 32933585 32933721 -56570832 - MLT1L LTR MaLR -49 566 422 2555 101 27 5 chr17 32933748 32934115 -56570438 + THE1C LTR MaLR 1 375 0 1401 234 142 16 chr17 32934118 32934284 -56570269 + MLT1D LTR MaLR 21 165 -340 2310 94 0 0 chr17 32934284 32934591 -56569962 + AluSg SINE Alu 1 307 -3 1401 234 142 16 chr17 32934591 32934855 -56569698 + MLT1D LTR MaLR 165 505 0 2118 94 3 24 chr17 32935251 32935549 -56569004 + AluSg SINE Alu 3 294 -16 665 314 42 24 chr17 32935573 32935910 -56568643 + L2 LINE L2 2404 2746 -568 379 306 103 55 chr17 32935934 32936098 -56568455 + L2 LINE L2 2855 3010 -262 2299 86 0 0 chr17 32936098 32936399 -56568154 + AluSx SINE Alu 6 306 -6 379 306 103 55 chr17 32936399 32936632 -56567921 + L2 LINE L2 3010 3271 -1 335 229 100 8 chr17 32936741 32936859 -56567694 + MIR SINE MIR 32 170 -63 967 118 0 0 chr17 32938459 32938594 -56565959 + AluSq/x SINE Alu 1 135 -177 2167 89 7 7 chr17 32938594 32938897 -56565656 + AluSx SINE Alu 1 303 -9 2159 108 0 22 chr17 32939334 32939649 -56564904 - AluSx SINE Alu -4 308 1 448 315 94 33 chr17 32940507 32940869 -56563684 + L2 LINE L2 1933 2316 -998 359 224 237 83 chr17 32940856 32940983 -56563570 + L3 LINE CR1 1204 1310 -267 * 2084 119 0 0 chr17 32940983 32941285 -56563268 - AluSx SINE Alu -10 302 1 359 224 237 83 chr17 32941285 32941385 -56563168 + L3 LINE CR1 1310 1466 -111 1849 138 0 39 chr17 32941631 32941942 -56562611 - AluJb SINE Alu -13 299 1 2190 91 0 7 chr17 32942117 32942415 -56562138 + AluSg1 SINE Alu 1 296 -13 268 376 81 13 chr17 32942595 32942744 -56561809 - L2 LINE L2 -17 3255 3097 2300 87 0 10 chr17 32942808 32943119 -56561434 + AluSx SINE Alu 1 308 -4 1091 47 13 27 chr17 32943146 32943295 -56561258 + L1PB1 LINE L1 6003 6149 -2 2151 114 0 0 chr17 32943621 32943920 -56560633 + AluSq SINE Alu 1 299 -14 2217 85 0 0 chr17 32943921 32944215 -56560338 + AluY SINE Alu 1 294 -17 263 209 79 106 chr17 32944956 32945037 -56559516 + MIR SINE MIR 16 100 -108 2376 88 0 0 chr17 32945037 32945343 -56559210 - AluSx SINE Alu -6 306 1 263 209 79 106 chr17 32945343 32945389 -56559164 + MIR SINE MIR 100 146 -62 2133 90 23 13 chr17 32945397 32945707 -56558846 - AluSp SINE Alu 0 313 1 1886 144 7 3 chr17 32946064 32946369 -56558184 + AluSx SINE Alu 1 306 -6 213 39 0 0 chr17 32946854 32946880 -56557673 + (GGAA)n Simple_repeat Simple_repeat 1 26 0 2298 82 0 7 chr17 32947890 32948194 -56556359 - AluSg1 SINE Alu -5 304 3 413 170 107 204 chr17 32948517 32948603 -56555950 + MIR SINE MIR 6 99 -163 1733 148 54 7 chr17 32948603 32948900 -56555653 + AluJb SINE Alu 1 311 -1 413 170 107 204 chr17 32948900 32948940 -56555613 + MIR SINE MIR 99 141 -121 3096 156 20 38 chr17 32948940 32949524 -56555029 + L1MB5 LINE L1 5600 6173 -1 413 170 107 204 chr17 32949524 32949602 -56554951 + MIR SINE MIR 141 191 -71 2281 87 0 13 chr17 32949610 32949746 -56554807 + AluSx SINE Alu 1 137 -175 1948 82 43 7 chr17 32949746 32950053 -56554500 + AluY SINE Alu 1 311 0 2281 87 0 13 chr17 32950053 32950228 -56554325 + AluSx SINE Alu 137 308 -4 2129 108 7 0 chr17 32950230 32950526 -56554027 + AluSq SINE Alu 1 298 -15 283 95 0 48 chr17 32950534 32950576 -56553977 + Alu SINE Alu 1 40 -262 1952 113 14 0 chr17 32950576 32950860 -56553693 + AluSx SINE Alu 5 292 -20 780 158 201 34 chr17 32950860 32951069 -56553484 + Tigger7 DNA MER2_type 2344 2587 0 911 215 220 35 chr17 32951426 32951965 -56552588 + LTR50 LTR ERVL 1 738 -57 395 289 29 0 chr17 32952170 32952274 -56552279 + MIR SINE MIR 42 148 -60 225 274 145 16 chr17 32952914 32953038 -56551515 - L2 LINE L2 -2 3311 3172 24 32 0 0 chr17 32953416 32953447 -56551106 + GC_rich Low_complexity Low_complexity 1 31 0 30 27 0 0 chr17 32953524 32953561 -56550992 + GC_rich Low_complexity Low_complexity 1 37 0 23 101 0 0 chr17 32953626 32953705 -56550848 + GC_rich Low_complexity Low_complexity 1 79 0 33 56 0 0 chr17 32953871 32953925 -56550628 + GC_rich Low_complexity Low_complexity 1 54 0 613 193 171 59 chr17 32954618 32954805 -56549748 + MER3 DNA MER1_type 1 208 -1 2110 107 10 7 chr17 32955066 32955376 -56549177 + AluSx SINE Alu 1 311 -1 830 139 36 7 chr17 32955625 32955762 -56548791 + AluSg/x SINE Alu 154 294 -18 1589 158 17 34 chr17 32955848 32956146 -56548407 + AluJo SINE Alu 1 293 -19 654 244 183 45 chr17 32956208 32956530 -56548023 + L1ME4a LINE L1 5378 5779 -342 1921 113 10 14 chr17 32956530 32956822 -56547731 + AluSg SINE Alu 1 291 -19 654 244 183 45 chr17 32956822 32956942 -56547611 + L1ME4a LINE L1 5779 5881 -240 2217 94 0 10 chr17 32957082 32957390 -56547163 - AluSq SINE Alu -8 305 1 665 185 0 0 chr17 32957583 32957691 -56546862 + FLAM_A SINE Alu 8 115 -27 25 0 0 0 chr17 32957695 32957720 -56546833 + AT_rich Low_complexity Low_complexity 1 25 0 1806 172 7 0 chr17 32958209 32958512 -56546041 - AluJb SINE Alu -2 310 6 2099 121 0 7 chr17 32958619 32958926 -56545627 + AluSx SINE Alu 1 305 -7 1024 203 4 30 chr17 32959139 32959376 -56545177 - AluJo SINE Alu -12 300 70 2008 108 21 0 chr17 32959527 32959829 -56544724 - AluSq SINE Alu 0 308 1 256 209 30 45 chr17 32960363 32960430 -56544123 + MIR SINE MIR 75 140 -122 1951 69 0 0 chr17 32960576 32960823 -56543730 + AluY SINE Alu 55 301 -10 2107 84 6 26 chr17 32960831 32960963 -56543590 + AluSg SINE Alu 2 135 -175 2024 90 45 17 chr17 32960963 32961252 -56543301 + AluSg SINE Alu 1 297 -13 2107 84 6 26 chr17 32961252 32961430 -56543123 + AluSg SINE Alu 135 306 -4 360 256 105 63 chr17 32961481 32961719 -56542834 - MIR SINE MIR -14 248 1 2085 114 0 0 chr17 32961743 32962040 -56542513 + AluSx SINE Alu 2 298 -14 2209 99 0 3 chr17 32962192 32962495 -56542058 + AluSc SINE Alu 1 302 -7 1882 164 0 3 chr17 32962834 32963145 -56541408 - AluJo SINE Alu 0 312 3 373 209 28 34 chr17 32963228 32963331 -56541222 + L1ME LINE L1 5624 5714 -407 2043 117 10 0 chr17 32963348 32963639 -56540914 + AluSx SINE Alu 1 294 -18 1561 169 10 41 chr17 32963681 32963995 -56540558 - AluJo SINE Alu -8 304 1 1071 165 0 0 chr17 32964001 32964165 -56540388 - FRAM SINE Alu -2 164 1 4615 148 25 10 chr17 32964179 32964520 -56540033 - L1PA16 LINE L1 0 6166 5826 1191 256 89 20 chr17 32964520 32965023 -56539530 - L1ME3A LINE L1 -344 5826 5289 2385 77 0 6 chr17 32965026 32965337 -56539216 - AluY SINE Alu 0 311 3 1260 239 0 17 chr17 32965340 32965504 -56539049 - AluJo SINE Alu -20 292 134 2416 59 0 10 chr17 32965504 32965808 -56538745 - AluY SINE Alu -10 301 1 1260 239 0 17 chr17 32965808 32965940 -56538613 - AluJo SINE Alu -178 134 1 685 241 0 7 chr17 32965983 32966128 -56538425 + AluJo SINE Alu 2 145 -167 1786 160 7 0 chr17 32966129 32966422 -56538131 + AluSx SINE Alu 2 296 -16 2110 104 0 3 chr17 32966428 32966726 -56537827 + AluSx SINE Alu 1 297 -15 1549 199 0 26 chr17 32966902 32967208 -56537345 + AluJo SINE Alu 1 298 -14 1215 148 20 0 chr17 32967235 32967431 -56537122 + AluSx SINE Alu 1 200 -112 198 118 0 0 chr17 32967436 32967470 -56537083 + (A)n Simple_repeat Simple_repeat 1 34 0 2029 120 3 13 chr17 32967485 32967785 -56536768 + AluSx SINE Alu 1 297 -15 376 71 18 0 chr17 32968305 32968361 -56536192 + L1MA4A LINE L1 6236 6292 -11 1937 141 3 0 chr17 32968786 32969077 -56535476 + AluSx SINE Alu 6 297 -15 2090 113 3 3 chr17 32969166 32969466 -56535087 + AluSx SINE Alu 1 300 -12 2104 118 7 3 chr17 32970059 32970364 -56534189 + AluSc SINE Alu 1 306 -3 2121 102 6 13 chr17 32970539 32970852 -56533701 - AluSq SINE Alu -1 312 2 2290 93 3 0 chr17 32970879 32971190 -56533363 + AluSp SINE Alu 1 312 -1 1984 141 0 13 chr17 32971246 32971559 -56532994 + AluSx SINE Alu 1 309 -3 228 349 27 23 chr17 32971573 32971834 -56532719 + L1ME LINE L1 5491 5752 -369 254 204 272 29 chr17 32971870 32971973 -56532580 - L2 LINE L2 -7 3306 3179 936 133 0 0 chr17 32972066 32972201 -56532352 + AluSq/x SINE Alu 1 135 -177 2084 120 3 0 chr17 32972202 32972501 -56532052 + AluSx SINE Alu 1 300 -12 1948 133 0 0 chr17 32973632 32973911 -56530642 + AluSx SINE Alu 9 287 -25 1578 160 0 7 chr17 32973928 32974197 -56530356 + AluJb SINE Alu 25 291 -21 2192 114 0 0 chr17 32974340 32974647 -56529906 + AluSx SINE Alu 1 307 -5 1912 126 0 29 chr17 32974648 32974958 -56529595 + AluSx SINE Alu 3 303 -9 1948 116 17 7 chr17 32975408 32975701 -56528852 + AluSx SINE Alu 1 296 -16 1835 151 10 19 chr17 32975776 32976088 -56528465 - AluSx SINE Alu -3 309 1 1390 142 95 15 chr17 32976220 32976494 -56528059 - AluJb SINE Alu -16 296 1 228 35 0 0 chr17 32976532 32976561 -56527992 + (TG)n Simple_repeat Simple_repeat 2 30 0 2101 97 0 0 chr17 32976561 32976839 -56527714 - AluSq SINE Alu -27 286 9 2092 106 3 7 chr17 32976844 32977137 -56527416 - AluSc SINE Alu -17 292 1 1255 157 5 14 chr17 32977302 32977518 -56527035 - AluJb SINE Alu -12 300 87 844 174 0 14 chr17 32977568 32977712 -56526841 + FLAM_C SINE Alu 1 142 -1 2210 97 3 0 chr17 32977833 32978131 -56526422 - AluSp SINE Alu -14 299 1 1517 187 28 3 chr17 32978202 32978486 -56526067 - AluJb SINE Alu -21 291 1 2153 102 7 0 chr17 32978519 32978814 -56525739 - AluSx SINE Alu -15 297 1 1566 183 29 0 chr17 32979293 32979572 -56524981 + AluJb SINE Alu 6 292 -20 623 88 239 2 chr17 32979576 32979682 -56524871 + L1PB1 LINE L1 6011 6134 -17 2011 93 57 0 chr17 32979682 32979961 -56524592 - AluSx SINE Alu -17 295 1 623 88 239 2 chr17 32979961 32979976 -56524577 + L1PB1 LINE L1 6134 6144 -7 2038 121 0 0 chr17 32980025 32980314 -56524239 + AluSg SINE Alu 2 290 -20 305 252 104 17 chr17 32980657 32980772 -56523781 + MIR3 SINE MIR 73 197 -11 2084 103 0 3 chr17 32980898 32981190 -56523363 + AluSq SINE Alu 1 291 -22 21 0 0 0 chr17 32981273 32981294 -56523259 + AT_rich Low_complexity Low_complexity 1 21 0 783 83 9 0 chr17 32981555 32981664 -56522889 + AluSg/x SINE Alu 196 305 -5 1461 187 14 21 chr17 32981877 32982166 -56522387 - AluJo SINE Alu -23 289 3 2165 110 3 0 chr17 32982196 32982504 -56522049 + AluSq SINE Alu 1 309 -4 1907 132 50 0 chr17 32982943 32983224 -56521329 + AluSx SINE Alu 1 295 -17 2263 86 7 3 chr17 32983306 32983597 -56520956 + AluY SINE Alu 1 292 -19 952 113 0 15 chr17 32983599 32983732 -56520821 + AluSq SINE Alu 81 211 -102 2567 53 7 7 chr17 32984012 32984314 -56520239 - AluY SINE Alu -9 302 1 1603 167 60 4 chr17 32984531 32984812 -56519741 - AluJb SINE Alu -15 297 1 2027 136 0 7 chr17 32984850 32985144 -56519409 + AluSx SINE Alu 1 292 -20 2081 143 0 7 chr17 32985220 32985527 -56519026 + AluSx SINE Alu 1 305 -7 2341 81 0 7 chr17 32986257 32986553 -56518000 + AluSg SINE Alu 1 294 -16 2046 129 0 29 chr17 32987407 32987543 -56517010 + AluSx SINE Alu 1 139 -173 1598 116 68 8 chr17 32987543 32987793 -56516760 + AluSq SINE Alu 39 303 -10 2046 129 0 29 chr17 32987793 32987966 -56516587 + AluSx SINE Alu 139 301 -11 2136 115 7 16 chr17 32987966 32988270 -56516283 + AluSx SINE Alu 1 301 -11 1929 163 0 0 chr17 32988518 32988812 -56515741 + AluSx SINE Alu 18 311 -1 250 286 0 0 chr17 32989006 32989069 -56515484 + MARNA DNA Mariner 422 484 -102 2279 114 0 0 chr17 32990048 32990347 -56514206 - AluSx SINE Alu -13 299 1 298 210 90 18 chr17 32990357 32990599 -56513954 - L1M LINE L1 -806 5340 5175 1701 132 21 0 chr17 32990615 32990858 -56513695 - AluJb SINE Alu -16 296 49 1638 152 35 21 chr17 32990974 32991264 -56513289 + AluJo SINE Alu 1 294 -18 2341 88 7 7 chr17 32991414 32991719 -56512834 - AluSq SINE Alu -8 305 1 240 211 0 0 chr17 32991759 32991811 -56512742 - L3 LINE CR1 -817 760 709 207 196 18 36 chr17 32991985 32992041 -56512512 - L3 LINE CR1 -1124 453 399 2210 81 42 0 chr17 32992226 32992511 -56512042 + AluSq SINE Alu 1 297 -16 625 93 0 56 chr17 32992562 32992669 -56511884 + AluSg/x SINE Alu 174 274 -36 183 80 0 0 chr17 32992673 32992698 -56511855 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 1797 152 30 17 chr17 32992726 32993023 -56511530 + AluSx SINE Alu 1 301 -11 1185 161 186 16 chr17 32993027 32993275 -56511278 + AluJb SINE Alu 1 290 -12 1604 162 63 36 chr17 32993296 32993598 -56510955 + AluSg SINE Alu 1 310 0 2286 103 0 0 chr17 32993835 32994125 -56510428 + AluSc SINE Alu 1 290 -19 2347 69 31 0 chr17 32994271 32994561 -56509992 - AluSg SINE Alu -11 299 1 21 0 0 0 chr17 32994601 32994622 -56509931 + AT_rich Low_complexity Low_complexity 1 21 0 240 241 72 60 chr17 32994995 32995078 -56509475 - L2 LINE L2 -22 3291 3208 2092 71 60 7 chr17 32996107 32996396 -56508157 + AluSq SINE Alu 1 303 0 316 262 28 28 chr17 32997029 32997136 -56507417 + L2 LINE L2 3189 3295 -18 2010 129 0 0 chr17 32997260 32997571 -56506982 - AluSc SINE Alu 0 311 1 180 0 0 0 chr17 32997614 32997634 -56506919 + (TTTTG)n Simple_repeat Simple_repeat 4 23 0 1026 105 7 13 chr17 32997659 32997811 -56506742 + AluSq/x SINE Alu 1 151 -162 714 94 125 23 chr17 32997811 32997939 -56506614 - AluSg/x SINE Alu -40 270 130 1250 159 0 27 chr17 32997942 32998162 -56506391 - AluJo SINE Alu -15 297 84 603 197 23 38 chr17 32998163 32998295 -56506258 - AluJo/FLAM SINE Alu -171 131 2 2454 81 0 0 chr17 32998321 32998617 -56505936 - AluSq SINE Alu -17 296 1 1929 94 29 14 chr17 32998643 32998951 -56505602 - AluSg SINE Alu 0 312 1 2396 78 0 3 chr17 32998987 32999281 -56505272 + AluSg SINE Alu 1 293 -17 1695 127 32 0 chr17 32999292 32999544 -56505009 + AluSx SINE Alu 38 297 -15 903 135 0 0 chr17 32999544 32999670 -56504883 + AluSg/x SINE Alu 169 294 -16 832 127 0 22 chr17 32999734 32999868 -56504685 + AluSg SINE Alu 1 131 -179 2398 102 0 0 chr17 32999936 33000241 -56504312 - AluSq SINE Alu -8 305 1 387 164 17 2 chr17 33000320 33000405 -56504148 + AluS SINE Alu 228 300 0 1919 130 0 46 chr17 33000479 33000786 -56503767 + AluSx SINE Alu 1 293 -19 21 0 0 0 chr17 33000999 33001020 -56503533 + AT_rich Low_complexity Low_complexity 1 21 0 258 56 0 0 chr17 33002557 33002593 -56501960 + (TG)n Simple_repeat Simple_repeat 2 37 0 234 327 82 9 chr17 33002614 33002724 -56501829 + L2 LINE L2 2866 2983 -289 25 0 0 0 chr17 33002741 33002766 -56501787 + AT_rich Low_complexity Low_complexity 1 25 0 2746 227 70 44 chr17 33002837 33002925 -56501628 + L2 LINE L2 2131 2215 -1098 1132 137 13 97 chr17 33002925 33003062 -56501491 + MER3 DNA MER1_type 1 113 -96 2325 99 0 16 chr17 33003062 33003365 -56501188 - AluSx SINE Alu -14 298 1 1132 137 13 97 chr17 33003365 33003453 -56501100 + MER3 DNA MER1_type 113 207 -2 2746 227 70 44 chr17 33003453 33004003 -56500550 + L2 LINE L2 2215 2810 -503 2178 103 20 0 chr17 33004003 33004295 -56500258 + AluSp SINE Alu 1 298 -15 2746 227 70 44 chr17 33004295 33004707 -56499846 + L2 LINE L2 2810 3210 -103 2285 83 35 0 chr17 33004715 33005003 -56499550 - AluY SINE Alu -13 298 1 2300 84 7 3 chr17 33005003 33005301 -56499252 - AluSq SINE Alu -13 300 1 1900 137 38 0 chr17 33005392 33005685 -56498868 - AluSx SINE Alu 0 312 9 1598 127 0 0 chr17 33005711 33005939 -56498614 - AluSg/x SINE Alu -1 309 82 2584 70 3 0 chr17 33006943 33007255 -56497298 - AluSp SINE Alu 0 313 1 2365 90 0 0 chr17 33007373 33007672 -56496881 + AluSg SINE Alu 1 299 -11 816 253 94 26 chr17 33007987 33008370 -56496183 + L1MC4a LINE L1 5576 5984 -137 2146 100 17 0 chr17 33008374 33008663 -56495890 + AluSq SINE Alu 1 294 -19 2101 128 0 0 chr17 33008782 33009085 -56495468 - AluSc SINE Alu 0 303 1 2278 98 3 14 chr17 33009096 33009392 -56495161 - AluSp SINE Alu -20 293 1 383 280 32 55 chr17 33009995 33010205 -56494348 - MIR SINE MIR -9 253 48 1872 132 30 0 chr17 33010242 33010538 -56494015 - AluSx SINE Alu -3 309 5 1534 202 128 73 chr17 33011793 33011901 -56492652 - HAL1 LINE L1 -258 2249 2148 2370 85 3 3 chr17 33011901 33012207 -56492346 + AluSp SINE Alu 2 307 -6 1534 202 128 73 chr17 33012207 33012247 -56492306 - HAL1 LINE L1 -359 2148 2112 2076 106 34 0 chr17 33012247 33012540 -56492013 - AluSq SINE Alu -10 303 1 1534 202 128 73 chr17 33012540 33012975 -56491578 - HAL1 LINE L1 -395 2112 1633 880 147 7 0 chr17 33012975 33013111 -56491442 - FAM SINE Alu -13 172 36 417 206 122 38 chr17 33013113 33013244 -56491309 - HAL1 LINE L1 -867 1640 1499 1217 126 0 0 chr17 33013281 33013455 -56491098 - AluSg/x SINE Alu -5 305 132 2226 119 3 0 chr17 33013551 33013854 -56490699 + AluSx SINE Alu 1 304 -8 1271 111 0 0 chr17 33013855 33014026 -56490527 + AluSg/x SINE Alu 133 303 -9 2377 86 0 0 chr17 33015205 33015496 -56489057 - AluSg SINE Alu -19 291 1 2024 117 27 7 chr17 33015561 33015861 -56488692 - AluSx SINE Alu -6 306 1 1968 128 7 10 chr17 33015915 33016211 -56488342 + AluSx SINE Alu 3 297 -15 1991 125 27 0 chr17 33016252 33016549 -56488004 + AluSx SINE Alu 1 305 -7 223 196 18 0 chr17 33016600 33016656 -56487897 - MER5C DNA MER1_type -7 317 261 885 144 0 0 chr17 33017138 33017270 -56487283 + FLAM_C SINE Alu 1 132 -1 1807 174 3 3 chr17 33017293 33017591 -56486962 + AluJb SINE Alu 1 298 -14 191 286 61 0 chr17 33017647 33017696 -56486857 - MIR SINE MIR -177 85 34 2001 90 13 57 chr17 33018143 33018443 -56486110 - AluY SINE Alu -24 287 1 2166 72 3 84 chr17 33018475 33018807 -56485746 - AluSg SINE Alu -5 305 1 521 113 125 0 chr17 33018838 33018918 -56485635 - 5S rRNA rRNA -31 90 1 2072 136 0 3 chr17 33019001 33019309 -56485244 - AluSc SINE Alu -2 307 1 2239 103 3 0 chr17 33019398 33019689 -56484864 - AluSg SINE Alu -18 292 1 1225 117 0 0 chr17 33019820 33019982 -56484571 + AluSp SINE Alu 136 297 -16 25 0 0 0 chr17 33020129 33020154 -56484399 + AT_rich Low_complexity Low_complexity 1 25 0 1765 91 53 4 chr17 33021378 33021621 -56482932 - AluSg SINE Alu -55 255 1 2053 122 3 59 chr17 33021888 33022208 -56482345 + AluSg SINE Alu 1 302 -8 1282 80 6 6 chr17 33022354 33022517 -56482036 + AluY SINE Alu 1 163 -148 388 91 0 0 chr17 33022527 33022582 -56481971 + AluSc SINE Alu 244 298 -1 1483 198 51 0 chr17 33022587 33022860 -56481693 + AluJo SINE Alu 3 289 -23 1284 185 54 64 chr17 33022872 33023170 -56481383 + AluJo SINE Alu 1 295 -17 1594 134 87 32 chr17 33023242 33023519 -56481034 - AluJo SINE Alu -20 292 1 1621 151 4 37 chr17 33023997 33024130 -56480423 - AluSx SINE Alu -44 268 147 2257 91 0 23 chr17 33024130 33024439 -56480114 - AluSp SINE Alu -11 302 1 1621 151 4 37 chr17 33024439 33024577 -56479976 - AluSx SINE Alu -165 147 6 648 227 0 0 chr17 33024741 33024873 -56479680 + FLAM_A SINE Alu 2 133 0 784 214 56 31 chr17 33024894 33025090 -56479463 - AluSg/x SINE Alu 0 312 112 1913 157 7 0 chr17 33025333 33025632 -56478921 + AluSx SINE Alu 1 301 -11 1031 149 0 44 chr17 33025632 33025813 -56478740 + AluSg/x SINE Alu 134 306 -6 2192 107 13 19 chr17 33026408 33026717 -56477836 - AluSp SINE Alu -6 307 1 726 176 15 8 chr17 33026822 33026953 -56477600 + FLAM_A SINE Alu 1 132 -1 373 287 0 43 chr17 33026978 33026989 -56477564 - L1MC4 LINE L1 -1319 6723 6713 2014 142 0 3 chr17 33026989 33027277 -56477276 + AluSx SINE Alu 1 287 -25 373 287 0 43 chr17 33027277 33027380 -56477173 - L1MC4 LINE L1 -1329 6713 6614 1721 170 10 14 chr17 33027409 33027697 -56476856 - AluJo SINE Alu -25 287 1 757 204 0 54 chr17 33027722 33027889 -56476664 + FRAM SINE Alu 2 159 -17 28 0 0 0 chr17 33028085 33028113 -56476440 + AT_rich Low_complexity Low_complexity 1 28 0 1757 144 65 0 chr17 33028927 33029205 -56475348 + AluJb SINE Alu 1 296 -16 1943 84 28 4 chr17 33029235 33029484 -56475069 + AluY SINE Alu 2 256 -55 22 35 0 0 chr17 33030421 33030450 -56474103 + AT_rich Low_complexity Low_complexity 1 29 0 590 260 242 11 chr17 33031799 33032076 -56472477 - L2 LINE L2 0 3313 2973 875 215 0 0 chr17 33032107 33032251 -56472302 + FRAM SINE Alu 1 144 -32 2064 120 3 7 chr17 33032251 33032550 -56472003 - AluY SINE Alu -8 303 6 2348 93 0 3 chr17 33032586 33032887 -56471666 + AluSg SINE Alu 1 300 -10 216 61 30 0 chr17 33033169 33033202 -56471351 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 2151 103 7 0 chr17 33033202 33033484 -56471069 - AluSx SINE Alu -28 284 1 2007 223 109 110 chr17 33033786 33033805 -56470748 - L1MC4 LINE L1 -3 8039 8021 2591 59 7 0 chr17 33033805 33034110 -56470443 + AluSc SINE Alu 3 309 0 2007 223 109 110 chr17 33034110 33034938 -56469615 - L1MC4 LINE L1 -21 8021 7194 226 132 0 0 chr17 33034938 33034976 -56469577 + HY3 scRNA scRNA 63 100 -1 2007 223 109 110 chr17 33034976 33034997 -56469556 - L1MC4 LINE L1 -848 7194 7174 261 0 0 0 chr17 33034997 33035026 -56469527 + (GA)n Simple_repeat Simple_repeat 2 30 0 810 194 0 0 chr17 33035032 33035161 -56469392 + AluJo SINE Alu 4 132 -170 2007 223 109 110 chr17 33035161 33035417 -56469136 - L1MC4 LINE L1 -873 7169 6868 2339 89 7 0 chr17 33035417 33035721 -56468832 - AluSp SINE Alu -7 306 1 2007 223 109 110 chr17 33035721 33035829 -56468724 - L1MC4 LINE L1 -1174 6868 6761 856 189 44 6 chr17 33035858 33036017 -56468536 + AluJo SINE Alu 137 301 -1 626 249 127 0 chr17 33036229 33036450 -56468103 + L1MC/D LINE L1 5295 5543 -2265 238 226 0 0 chr17 33036477 33036530 -56468023 + L1MC/D LINE L1 5779 5831 -1977 775 234 88 9 chr17 33036691 33036918 -56467635 + MIR SINE MIR 18 262 0 191 147 29 0 chr17 33037137 33037171 -56467382 - L2 LINE L2 -15 3298 3264 2154 113 3 10 chr17 33037348 33037649 -56466904 + AluSg SINE Alu 1 299 -11 2201 107 0 16 chr17 33038236 33038545 -56466008 - AluSg SINE Alu -6 304 1 640 179 232 21 chr17 33038561 33038751 -56465802 + MIR SINE MIR 30 259 -3 264 300 96 53 chr17 33039590 33039840 -56464713 + L1ME4a LINE L1 5290 5560 -561 1884 157 3 13 chr17 33039840 33040145 -56464408 + AluSx SINE Alu 1 302 -10 264 300 96 53 chr17 33040145 33040230 -56464323 + L1ME4a LINE L1 5560 5640 -481 226 266 38 13 chr17 33040422 33040501 -56464052 + L1ME4a LINE L1 5989 6069 -52 2336 113 0 0 chr17 33040610 33040920 -56463633 - AluSg SINE Alu 0 310 1 1689 141 98 4 chr17 33040926 33041202 -56463351 - AluSx SINE Alu -10 302 1 207 0 0 0 chr17 33041287 33041310 -56463243 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2140 92 7 4 chr17 33041505 33041820 -56462733 - AluSg SINE Alu 0 316 1 438 299 68 18 chr17 33042110 33042388 -56462165 - L2 LINE L2 -836 2478 2187 609 287 81 39 chr17 33042558 33042616 -56461937 + MER102a DNA MER1_type 1 55 -1362 2208 102 0 26 chr17 33042616 33042919 -56461634 + AluSq SINE Alu 1 295 -18 609 287 81 39 chr17 33042919 33043167 -56461386 + MER102a DNA MER1_type 55 320 -10 1681 133 21 107 chr17 33043558 33043757 -56460796 - AluYb8 SINE Alu -9 309 149 2157 91 17 10 chr17 33043757 33044053 -56460500 + AluY SINE Alu 1 298 -13 1681 133 21 107 chr17 33044053 33044191 -56460362 - AluYb8 SINE Alu -169 149 1 352 232 20 50 chr17 33044422 33044521 -56460032 - MER46C DNA MER2_type -218 120 25 2308 85 0 52 chr17 33044554 33044882 -56459671 - AluY SINE Alu 0 311 1 2251 90 0 47 chr17 33044927 33045248 -56459305 - AluY SINE Alu -3 308 3 922 97 0 8 chr17 33045255 33045379 -56459174 - AluY SINE Alu -179 132 10 1875 129 0 4 chr17 33045379 33045642 -56458911 - AluSx SINE Alu -50 262 1 1701 185 7 3 chr17 33045721 33046024 -56458529 - AluJb SINE Alu -8 304 1 872 126 7 15 chr17 33046207 33046342 -56458211 + AluJo SINE Alu 1 134 -178 2070 126 18 0 chr17 33046593 33046879 -56457674 - AluSx SINE Alu -21 291 1 1987 132 14 3 chr17 33046989 33047285 -56457268 + AluSq SINE Alu 1 299 -14 2397 93 0 3 chr17 33047377 33047689 -56456864 - AluY SINE Alu 0 311 1 1979 116 17 7 chr17 33047692 33047984 -56456569 - AluSq SINE Alu -18 295 1 1575 161 30 39 chr17 33048393 33048698 -56455855 - AluSx SINE Alu -4 308 7 352 103 52 0 chr17 33049017 33049075 -56455478 + L1MA2 LINE L1 6240 6300 -4 709 167 0 0 chr17 33049982 33050102 -56454451 + AluSp/q SINE Alu 190 309 -4 1881 147 20 3 chr17 33050911 33051203 -56453350 + AluSx SINE Alu 1 297 -15 1954 138 0 14 chr17 33051314 33051597 -56452956 + AluSx SINE Alu 4 282 -30 23 0 0 0 chr17 33051601 33051624 -56452929 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr17 33051868 33051894 -56452659 + AT_rich Low_complexity Low_complexity 1 26 0 22 80 0 0 chr17 33052049 33052099 -56452454 + AT_rich Low_complexity Low_complexity 1 50 0 2114 142 0 10 chr17 33052359 33052669 -56451884 + AluSx SINE Alu 1 307 -5 713 203 0 0 chr17 33052942 33053060 -56451493 + AluJb SINE Alu 6 123 -189 2298 91 0 0 chr17 33053060 33053346 -56451207 - AluY SINE Alu -9 302 17 21 36 0 0 chr17 33055615 33055643 -56448910 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 33056202 33056223 -56448330 + AT_rich Low_complexity Low_complexity 1 21 0 3389 177 105 11 chr17 33056383 33057128 -56447425 + L1MC3 LINE L1 6971 7785 0 1853 180 45 3 chr17 33057338 33057672 -56446881 + MER7A DNA MER2_type 1 346 0 2492 66 0 10 chr17 33057697 33058002 -56446551 + AluY SINE Alu 1 302 -9 1989 103 34 17 chr17 33058625 33058917 -56445636 - AluSc SINE Alu -12 297 1 1077 165 0 0 chr17 33058946 33059104 -56445449 - FRAM SINE Alu -25 151 1 357 226 68 68 chr17 33059527 33059717 -56444836 + MIR SINE MIR 73 262 0 1139 161 109 5 chr17 33059821 33060032 -56444521 + MER46A DNA MER2_type 3 235 -1 2007 136 4 0 chr17 33060207 33060486 -56444067 - AluSx SINE Alu -32 280 1 1639 157 34 0 chr17 33060854 33061116 -56443437 + AluJb SINE Alu 27 297 -15 576 269 166 30 chr17 33061288 33061626 -56442927 - L2 LINE L2 -5 3308 2925 981 198 0 12 chr17 33061715 33061882 -56442671 + AluJb SINE Alu 138 302 -10 1958 84 4 8 chr17 33061891 33062141 -56442412 + AluSg SINE Alu 1 249 -61 1766 163 3 0 chr17 33062302 33062610 -56441943 + AluY SINE Alu 1 309 0 621 245 148 9 chr17 33062629 33062845 -56441708 + MIR SINE MIR 7 252 -10 878 212 65 0 chr17 33063018 33063202 -56441351 + Charlie4 DNA MER1_type 1 196 -1765 670 98 0 0 chr17 33063204 33063296 -56441257 + AluSg/x SINE Alu 203 294 -16 194 196 0 43 chr17 33063691 33063737 -56440816 - MIR3 SINE MIR -17 191 148 1592 73 0 0 chr17 33063825 33064017 -56440536 + AluY SINE Alu 1 192 -119 28 0 0 0 chr17 33064313 33064341 -56440212 + GC_rich Low_complexity Low_complexity 1 28 0 37 52 0 0 chr17 33064475 33064533 -56440020 + GC_rich Low_complexity Low_complexity 1 58 0 1756 173 51 110 chr17 33065466 33065909 -56438644 - L1ME LINE L1 -387 5779 5311 1662 164 7 43 chr17 33065909 33066214 -56438339 - AluJo SINE Alu -18 294 1 1756 173 51 110 chr17 33066214 33066269 -56438284 - L1ME LINE L1 -855 5311 5254 1868 142 6 47 chr17 33066269 33066587 -56437966 - AluJo SINE Alu -7 305 1 1756 173 51 110 chr17 33066587 33066811 -56437742 - L1ME LINE L1 -912 5254 5073 816 163 129 43 chr17 33066819 33067028 -56437525 - MER58B DNA MER1_type -10 331 105 2619 123 30 88 chr17 33067168 33067641 -56436912 - L1MA4 LINE L1 -27 6273 5833 2368 88 0 0 chr17 33067641 33067936 -56436617 - AluSg SINE Alu -15 295 1 2619 123 30 88 chr17 33067936 33067998 -56436555 - L1MA4 LINE L1 -467 5833 5769 761 167 8 30 chr17 33068003 33068135 -56436418 - FLAM_C SINE Alu 0 133 5 2253 105 3 0 chr17 33068144 33068438 -56436115 - AluSx SINE Alu -17 295 1 1940 241 36 12 chr17 33068461 33069051 -56435502 - L1M4 LINE L1 -3170 2976 2373 2000 142 3 0 chr17 33069076 33069364 -56435189 + AluSx SINE Alu 1 289 -23 2141 125 3 0 chr17 33069376 33069681 -56434872 + AluSx SINE Alu 1 306 -6 1760 140 39 7 chr17 33069921 33070200 -56434353 - AluSx SINE Alu -24 288 1 1774 135 50 0 chr17 33070209 33070469 -56434084 - AluSx SINE Alu -23 289 17 503 164 64 108 chr17 33070488 33070744 -56433809 - L1MC/D LINE L1 -694 5472 5206 2164 98 28 0 chr17 33070744 33070866 -56433687 + AluY SINE Alu 1 118 -193 228 35 0 0 chr17 33070866 33070895 -56433658 + (CA)n Simple_repeat Simple_repeat 2 30 0 2164 98 28 0 chr17 33070895 33071059 -56433494 + AluY SINE Alu 118 295 -16 503 164 64 108 chr17 33071059 33071096 -56433457 - L1MC/D LINE L1 -960 5206 5169 1845 156 9 19 chr17 33071096 33071411 -56433142 + AluJb SINE Alu 1 312 0 503 164 64 108 chr17 33071411 33071493 -56433060 - L1MC/D LINE L1 -997 5169 5085 2154 138 0 3 chr17 33071493 33071804 -56432749 + AluSx SINE Alu 1 310 -2 503 164 64 108 chr17 33071804 33072034 -56432519 - L1MC/D LINE L1 -1081 5085 4964 778 185 0 0 chr17 33072064 33072194 -56432359 - FLAM_C SINE Alu -12 131 2 911 169 0 0 chr17 33072250 33072398 -56432155 + AluJb SINE Alu 138 285 -27 792 79 22 0 chr17 33072398 33072537 -56432016 + (TA)n Simple_repeat Simple_repeat 2 143 0 933 255 85 17 chr17 33075759 33076112 -56428441 + L1MC4 LINE L1 7623 7999 -43 1950 139 4 0 chr17 33076207 33076488 -56428065 + AluJb SINE Alu 14 295 -17 675 229 193 0 chr17 33076822 33077040 -56427513 - MIR SINE MIR -1 261 2 1582 220 155 29 chr17 33077211 33077514 -56427039 - L1MC4 LINE L1 -371 7671 7408 1658 169 13 46 chr17 33077514 33077821 -56426732 + AluJb SINE Alu 2 298 -14 1582 220 155 29 chr17 33077821 33078149 -56426404 - L1MC4 LINE L1 -634 7408 6960 26 50 0 0 chr17 33078767 33078807 -56425746 + AT_rich Low_complexity Low_complexity 1 40 0 198 0 0 0 chr17 33079141 33079163 -56425390 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 246 62 0 0 chr17 33079501 33079533 -56425020 + (T)n Simple_repeat Simple_repeat 1 32 0 2096 143 0 3 chr17 33082499 33082807 -56421746 + AluJb SINE Alu 1 307 -5 240 149 0 0 chr17 33082868 33082915 -56421638 + (T)n Simple_repeat Simple_repeat 1 47 0 2323 113 0 0 chr17 33084114 33084425 -56420128 + AluY SINE Alu 1 311 0 826 127 0 0 chr17 33084510 33084620 -56419933 + AluJb SINE Alu 178 287 -25 622 281 51 68 chr17 33084631 33085098 -56419455 - L1M4 LINE L1 -1529 4617 4159 1071 177 91 10 chr17 33085099 33085308 -56419245 - AluJo SINE Alu -5 307 82 510 225 70 80 chr17 33085534 33085610 -56418943 - MER2 DNA MER2_type -134 211 136 1277 190 145 22 chr17 33085610 33085879 -56418674 + AluJo SINE Alu 1 302 0 510 225 70 80 chr17 33085879 33086015 -56418538 - MER2 DNA MER2_type -209 136 1 1406 147 8 144 chr17 33086547 33086908 -56417645 + AluJb SINE Alu 1 312 0 817 189 0 20 chr17 33086908 33087056 -56417497 - FRAM SINE Alu -21 155 11 1998 156 3 0 chr17 33087068 33087363 -56417190 - AluJb SINE Alu -16 296 1 204 40 0 0 chr17 33087450 33087475 -56417078 + (GA)n Simple_repeat Simple_repeat 2 26 0 333 0 0 0 chr17 33087562 33087599 -56416954 + (TG)n Simple_repeat Simple_repeat 2 38 0 1235 166 41 68 chr17 33087637 33087932 -56416621 - L1MB7 LINE L1 -16 6168 5882 1874 154 14 7 chr17 33088005 33088291 -56416262 - AluJb SINE Alu -24 288 1 2528 170 44 2 chr17 33088294 33088771 -56415782 - L1MB3 LINE L1 -44 6139 5643 1903 94 0 0 chr17 33088773 33089008 -56415545 - AluSq SINE Alu -78 235 1 455 198 0 78 chr17 33089067 33089183 -56415370 - AluJb SINE Alu -119 193 87 425 275 52 2 chr17 33089222 33089462 -56415091 + MLT1J2 LTR MaLR 125 419 -31 497 258 106 71 chr17 33089513 33089528 -56415025 - MIR SINE MIR -57 205 192 1562 153 122 16 chr17 33089528 33089783 -56414770 - AluJo SINE Alu -30 282 1 497 258 106 71 chr17 33089783 33089839 -56414714 - MIR SINE MIR -70 192 139 1662 125 0 89 chr17 33089839 33090119 -56414434 - AluSx SINE Alu -21 291 37 497 258 106 71 chr17 33090119 33090244 -56414309 - MIR SINE MIR -123 139 1 225 234 16 47 chr17 33090457 33090521 -56414032 + MIR SINE MIR 201 262 0 823 211 93 35 chr17 33090540 33090743 -56413810 + MIR SINE MIR 10 229 -33 21 0 0 0 chr17 33091240 33091261 -56413292 + AT_rich Low_complexity Low_complexity 1 21 0 815 93 0 126 chr17 33091714 33091865 -56412688 + FLAM_C SINE Alu 1 132 -1 2317 118 0 6 chr17 33091957 33092271 -56412282 + AluSx SINE Alu 1 312 0 637 287 29 8 chr17 33092420 33092664 -56411889 - L2 LINE L2 -258 3055 2807 2248 100 13 7 chr17 33092667 33092977 -56411576 + AluSx SINE Alu 1 312 0 2118 124 10 13 chr17 33093213 33093520 -56411033 + AluSx SINE Alu 1 306 -6 909 229 68 16 chr17 33093727 33093976 -56410577 - MLT1H LTR MaLR -259 290 29 2523 45 3 0 chr17 33094102 33094394 -56410159 - AluY SINE Alu -18 293 1 189 0 0 0 chr17 33095391 33095412 -56409141 + (T)n Simple_repeat Simple_repeat 1 21 0 408 55 0 0 chr17 33095819 33095874 -56408679 + (GA)n Simple_repeat Simple_repeat 1 55 0 780 203 15 40 chr17 33096287 33096346 -56408207 - LTR26E LTR ERV1 -423 199 140 2345 90 3 0 chr17 33096346 33096646 -56407907 - AluSp SINE Alu -10 303 3 780 203 15 40 chr17 33096646 33096788 -56407765 - LTR26E LTR ERV1 -482 140 3 790 238 198 9 chr17 33096791 33097140 -56407413 + MLT1D LTR MaLR 82 496 -9 772 141 0 25 chr17 33097241 33097362 -56407191 - AluSg/x SINE Alu -11 299 182 1721 114 23 46 chr17 33097362 33097624 -56406929 + AluSx SINE Alu 44 299 -13 1183 67 0 0 chr17 33097624 33097758 -56406795 + AluSg SINE Alu 1 134 -176 2267 89 3 17 chr17 33097758 33098050 -56406503 + AluY SINE Alu 1 288 -23 3126 152 47 47 chr17 33098055 33098515 -56406038 + L1MA7 LINE L1 5635 6094 -197 2391 104 0 0 chr17 33098515 33098824 -56405729 - AluSg1 SINE Alu 0 309 1 3126 152 47 47 chr17 33098824 33098880 -56405673 + L1MA7 LINE L1 6094 6149 -142 725 181 16 8 chr17 33098880 33099007 -56405546 + FLAM_C SINE Alu 1 128 -5 3126 152 47 47 chr17 33099007 33099146 -56405407 + L1MA7 LINE L1 6148 6291 0 2016 133 25 0 chr17 33099155 33099441 -56405112 + AluSx SINE Alu 4 296 -16 1989 121 66 0 chr17 33099443 33099732 -56404821 + AluSg SINE Alu 1 308 -2 316 113 48 0 chr17 33099732 33099794 -56404759 + GA-rich Low_complexity Low_complexity 1 65 0 2384 61 0 51 chr17 33099794 33100107 -56404446 + AluY SINE Alu 1 297 -14 2143 133 0 3 chr17 33100558 33100851 -56403702 + AluSx SINE Alu 1 292 -20 538 170 259 0 chr17 33100862 33100974 -56403579 + AluJo SINE Alu 3 143 -169 331 260 34 62 chr17 33100974 33101020 -56403533 - MLT1G1 LTR MaLR -451 144 98 2216 125 152 11 chr17 33101020 33101395 -56403158 + MSTA LTR MaLR 1 428 0 331 260 34 62 chr17 33101395 33101494 -56403059 - MLT1G1 LTR MaLR -497 98 3 493 221 0 33 chr17 33101494 33101616 -56402937 + LTR16C LTR ERVL 374 491 0 2187 122 28 73 chr17 33101786 33101817 -56402736 - MSTA LTR MaLR -20 408 377 2225 110 0 0 chr17 33101817 33102147 -56402406 - AluSx SINE Alu 0 330 1 2187 122 28 73 chr17 33102147 33102363 -56402190 - MSTA LTR MaLR -51 377 184 2178 131 0 7 chr17 33102363 33102669 -56401884 + AluSx SINE Alu 1 304 -8 2187 122 28 73 chr17 33102669 33102846 -56401707 - MSTA LTR MaLR -244 184 1 29 28 0 0 chr17 33102853 33102889 -56401664 + AT_rich Low_complexity Low_complexity 1 36 0 2355 88 0 7 chr17 33102943 33103237 -56401316 + AluY SINE Alu 1 292 -19 275 271 43 0 chr17 33103502 33103572 -56400981 + MIR SINE MIR 118 190 -72 717 144 0 32 chr17 33103575 33103700 -56400853 - FLAM_C SINE Alu 0 143 23 2153 118 22 35 chr17 33103732 33103867 -56400686 + AluSq SINE Alu 2 137 -176 2512 67 0 10 chr17 33103867 33104180 -56400373 + AluY SINE Alu 1 310 -1 2153 118 22 35 chr17 33104180 33104357 -56400196 + AluSq SINE Alu 137 310 -3 417 304 24 8 chr17 33104360 33104485 -56400068 - MIR SINE MIR -13 249 123 1881 176 0 25 chr17 33105277 33105596 -56398957 - AluJo SINE Alu 0 312 2 1965 141 0 46 chr17 33105600 33105781 -56398772 - AluSx SINE Alu 0 312 151 2115 114 21 3 chr17 33105781 33106071 -56398482 - AluSg SINE Alu -15 295 1 1965 141 0 46 chr17 33106071 33106216 -56398337 - AluSx SINE Alu -161 151 1 781 191 0 22 chr17 33106228 33106364 -56398189 - FLAM_A SINE Alu 0 133 1 1415 234 117 5 chr17 33106390 33106835 -56397718 - L1ME3 LINE L1 -24 6138 5644 1608 175 25 7 chr17 33106836 33107110 -56397443 - AluJo SINE Alu -32 280 2 255 299 45 0 chr17 33107192 33107259 -56397294 - L2 LINE L2 0 3313 3244 556 133 0 0 chr17 33107282 33107357 -56397196 + AluS SINE Alu 2 76 -237 2183 112 6 22 chr17 33107466 33107778 -56396775 - AluSx SINE Alu -5 307 1 568 109 0 11 chr17 33107805 33107897 -56396656 - FLAM_A SINE Alu -10 132 42 368 199 56 12 chr17 33107910 33108014 -56396539 - MIR SINE MIR -69 139 45 230 301 7 37 chr17 33108536 33108672 -56395881 + GA-rich Low_complexity Low_complexity 4 135 0 200 108 0 27 chr17 33109297 33109334 -56395219 + (GGGA)n Simple_repeat Simple_repeat 4 39 0 245 288 0 54 chr17 33109337 33109448 -56395105 + G-rich Low_complexity Low_complexity 2 106 0 183 255 59 0 chr17 33110311 33110362 -56394191 - MER5C DNA MER1_type -184 140 87 2340 83 0 0 chr17 33110559 33110882 -56393671 - AluY SINE Alu 0 323 1 197 314 73 66 chr17 33110886 33111023 -56393530 - L2 LINE L2 0 3313 3176 565 258 23 0 chr17 33111390 33111518 -56393035 - MER5A DNA MER1_type -22 167 37 1086 208 33 0 chr17 33112503 33112715 -56391838 + MER20 DNA MER1_type 1 219 0 212 361 0 12 chr17 33113129 33113212 -56391341 - MIR SINE MIR -89 173 92 984 125 13 13 chr17 33113305 33113457 -56391096 + AluSx SINE Alu 2 153 -159 1704 115 58 0 chr17 33113579 33113822 -56390731 + AluSq SINE Alu 1 257 -56 717 64 0 21 chr17 33113827 33113921 -56390632 - AluS SINE Alu -219 93 2 667 212 0 29 chr17 33113978 33114115 -56390438 - FLAM_A SINE Alu 0 133 1 670 250 21 0 chr17 33114118 33114262 -56390291 - MIR SINE MIR -98 164 18 2047 128 21 3 chr17 33114328 33114618 -56389935 + AluSx SINE Alu 1 295 -17 2622 52 0 0 chr17 33114618 33114923 -56389630 + AluY SINE Alu 1 305 -6 2228 89 51 0 chr17 33114923 33115216 -56389337 + AluSx SINE Alu 1 308 -4 229 307 11 11 chr17 33115216 33115304 -56389249 - L2 LINE L2 -320 2952 2865 424 304 87 7 chr17 33115365 33115503 -56389050 - MIR SINE MIR -80 182 34 876 65 9 0 chr17 33116772 33116879 -56387674 + AluSg/x SINE Alu 193 300 -12 401 272 117 61 chr17 33117037 33117121 -56387432 - MIR SINE MIR -26 236 158 2265 115 0 0 chr17 33117121 33117416 -56387137 - AluSx SINE Alu -17 295 1 401 272 117 61 chr17 33117416 33117511 -56387042 - MIR SINE MIR -104 158 47 2184 113 0 0 chr17 33118215 33118507 -56386046 - AluSx SINE Alu -20 292 1 1182 232 221 17 chr17 33118755 33119230 -56385323 - MLT1E2 LTR MaLR 0 626 55 1005 258 53 71 chr17 33119591 33119817 -56384736 + L2 LINE L2 2872 3101 -212 2087 120 3 0 chr17 33119817 33120100 -56384453 - AluSx SINE Alu -13 299 16 1005 258 53 71 chr17 33120100 33120301 -56384252 + L2 LINE L2 3101 3293 -20 1852 150 17 3 chr17 33120301 33120594 -56383959 + AluSx SINE Alu 1 297 -15 1005 258 53 71 chr17 33120594 33120615 -56383938 + L2 LINE L2 3293 3313 0 2271 98 7 0 chr17 33121224 33121521 -56383032 - AluSq SINE Alu -14 299 1 1847 172 0 13 chr17 33121524 33121826 -56382727 - AluJb SINE Alu -14 298 1 1090 125 39 149 chr17 33121851 33121990 -56382563 - LTR26E LTR ERV1 0 549 564 2194 123 7 16 chr17 33121990 33122300 -56382253 + AluSx SINE Alu 5 311 -1 1090 125 39 149 chr17 33122300 33122585 -56381968 - LTR26E LTR ERV1 16 565 250 2319 101 7 0 chr17 33122585 33122883 -56381670 + AluSx SINE Alu 1 300 -12 939 145 7 13 chr17 33122983 33123135 -56381418 + AluSg/x SINE Alu 160 310 -2 2373 116 0 6 chr17 33123352 33123663 -56380890 - AluSc SINE Alu 0 309 1 226 302 0 69 chr17 33124639 33124755 -56379798 - MIR SINE MIR -50 212 105 571 236 82 48 chr17 33124827 33125035 -56379518 + MIR SINE MIR 37 251 -11 2367 98 0 0 chr17 33125177 33125482 -56379071 - AluSx SINE Alu -7 305 1 574 292 47 43 chr17 33125577 33125854 -56378699 + L2 LINE L2 2820 3097 -216 2111 147 0 3 chr17 33125908 33126221 -56378332 - AluSx SINE Alu 0 312 1 2109 137 7 0 chr17 33127874 33128167 -56376386 + AluSx SINE Alu 1 295 -17 388 273 59 51 chr17 33128788 33128950 -56375603 - MIR SINE MIR -66 142 17 938 199 12 6 chr17 33129162 33129328 -56375225 + FRAM SINE Alu 6 172 -4 27 49 0 0 chr17 33129409 33129450 -56375103 + AT_rich Low_complexity Low_complexity 1 41 0 1877 171 0 13 chr17 33129451 33129750 -56374803 + AluJb SINE Alu 1 295 -17 2746 19 7 3 chr17 33129973 33130281 -56374272 + AluY SINE Alu 1 309 -2 2042 136 0 0 chr17 33133013 33133293 -56371260 - AluSq SINE Alu -33 280 1 21 0 0 0 chr17 33133343 33133364 -56371189 + AT_rich Low_complexity Low_complexity 1 21 0 939 136 0 0 chr17 33133365 33133497 -56371056 - FLAM_C SINE Alu -1 132 1 1536 159 82 0 chr17 33133818 33134088 -56370465 + AluJb SINE Alu 1 292 -20 1473 137 171 23 chr17 33134493 33134756 -56369797 + AluSx SINE Alu 1 302 0 954 161 0 0 chr17 33134756 33134927 -56369626 + AluSg/x SINE Alu 132 300 0 211 348 186 0 chr17 33135158 33135411 -56369142 - L2 LINE L2 -1075 2239 1940 2011 138 0 0 chr17 33135482 33135786 -56368767 - AluSx SINE Alu 0 312 9 515 272 75 0 chr17 33135804 33135951 -56368602 - Charlie8 DNA MER1_type -2259 158 1 427 194 65 0 chr17 33136382 33136475 -56368078 - MER113 DNA MER1_type? -62 459 361 880 139 0 0 chr17 33136476 33136605 -56367948 + FLAM_C SINE Alu 1 129 -4 356 207 62 110 chr17 33136627 33136682 -56367871 - MER113 DNA MER1_type? -148 373 317 2000 92 46 0 chr17 33136682 33136963 -56367590 - AluSg SINE Alu -16 294 1 929 213 0 6 chr17 33136966 33137135 -56367418 - FAM SINE Alu -6 169 2 356 207 62 110 chr17 33137135 33137220 -56367333 - MER113 DNA MER1_type? -206 315 236 1023 145 57 0 chr17 33137433 33137626 -56366927 - L1MB3 LINE L1 -1 6182 5979 263 290 84 37 chr17 33137667 33137774 -56366779 + MIR SINE MIR 107 218 -44 460 295 93 16 chr17 33138398 33138591 -56365962 + L3 LINE CR1 885 1092 -485 380 317 72 19 chr17 33138632 33138840 -56365713 - MIR SINE MIR -24 238 20 837 228 73 10 chr17 33139236 33139442 -56365111 + MIR SINE MIR 14 232 -30 1988 116 0 3 chr17 33139473 33139790 -56364763 + AluSx SINE Alu 1 316 0 245 302 94 0 chr17 33139827 33139923 -56364630 + L2 LINE L2 3132 3236 -36 1700 258 111 15 chr17 33139932 33140474 -56364079 + MLT1G1 LTR MaLR 1 594 -1 1783 222 44 17 chr17 33141009 33141484 -56363069 + MER69 DNA AcHobo 1 518 -2008 1006 109 0 0 chr17 33141543 33141680 -56362873 + AluSq/x SINE Alu 1 137 -176 1981 127 0 13 chr17 33141680 33141979 -56362574 + AluSq SINE Alu 1 295 -18 29 0 0 0 chr17 33141979 33142008 -56362545 + AT_rich Low_complexity Low_complexity 1 29 0 436 230 11 0 chr17 33142207 33142294 -56362259 - L2 LINE L2 -1 3271 3184 312 160 0 20 chr17 33142558 33142608 -56361945 - Alu SINE Alu -250 52 4 2206 92 3 0 chr17 33142634 33142926 -56361627 + AluSq SINE Alu 1 293 -20 1195 205 40 78 chr17 33143077 33143448 -56361105 + MSTD LTR MaLR 1 357 -39 642 243 10 15 chr17 33143540 33143746 -56360807 - L1ME LINE L1 -703 5463 5259 456 196 45 9 chr17 33143792 33143904 -56360649 - L1ME LINE L1 -885 5261 5146 21 57 0 0 chr17 33143920 33143955 -56360598 + AT_rich Low_complexity Low_complexity 1 35 0 2810 156 17 125 chr17 33143977 33144151 -56360402 - LTR34 LTR ERV1 -2 697 506 2224 88 3 0 chr17 33144151 33144445 -56360108 + AluSp SINE Alu 1 295 -18 2810 156 17 125 chr17 33144445 33145052 -56359501 - LTR34 LTR ERV1 -193 506 1 383 176 0 0 chr17 33145364 33145432 -56359121 + AluJ/FLAM SINE Alu 1 68 -234 1511 147 32 29 chr17 33145464 33145763 -56358790 + AluJb SINE Alu 3 302 0 267 178 0 22 chr17 33145983 33146028 -56358525 + Alu SINE Alu 1 44 -256 653 262 41 22 chr17 33146102 33146373 -56358180 + L1M4 LINE L1 4204 4479 -1667 1901 146 3 3 chr17 33147186 33147487 -56357066 - AluJb SINE Alu -11 301 1 277 186 29 0 chr17 33147517 33147579 -56356974 - MER69 DNA AcHobo -6 2520 2454 1649 164 41 0 chr17 33147579 33147872 -56356681 - AluJb SINE Alu -7 305 1 228 234 78 13 chr17 33148066 33148143 -56356410 - L2 LINE L2 -21 3251 3170 831 232 0 0 chr17 33148245 33148409 -56356144 + MIR SINE MIR 79 242 -20 189 213 0 0 chr17 33148553 33148600 -56355953 + (TG)n Simple_repeat Simple_repeat 2 48 0 263 383 41 13 chr17 33148715 33149031 -56355522 - L2 LINE L2 -424 2890 2566 2053 117 0 3 chr17 33149243 33149542 -56355011 - AluSq SINE Alu -15 298 1 947 111 0 7 chr17 33149652 33149787 -56354766 + AluJb SINE Alu 1 134 -178 1412 182 78 4 chr17 33150254 33150617 -56353936 + AluJb SINE Alu 2 302 0 241 333 30 0 chr17 33150745 33150844 -56353709 - MER113 DNA MER1_type? -417 104 3 269 176 14 68 chr17 33150847 33150921 -56353632 - MIR3 SINE MIR -49 159 90 1174 223 56 75 chr17 33150927 33151394 -56353159 - MLT1J LTR MaLR 0 511 54 636 162 45 78 chr17 33151394 33151463 -56353090 - MER69 DNA AcHobo -3 2523 2453 2292 60 10 10 chr17 33151463 33151762 -56352791 + AluY SINE Alu 1 299 -12 636 162 45 78 chr17 33151762 33151871 -56352682 - MER69 DNA AcHobo -73 2453 2351 1652 115 108 26 chr17 33152027 33152296 -56352257 + AluSx SINE Alu 1 291 -21 2167 71 39 0 chr17 33152300 33152583 -56351970 + AluSq SINE Alu 1 294 -19 1971 134 10 3 chr17 33152584 33152891 -56351662 + AluSx SINE Alu 1 309 -3 180 0 0 0 chr17 33153314 33153334 -56351219 + (TA)n Simple_repeat Simple_repeat 2 21 0 877 212 102 33 chr17 33153378 33153394 -56351159 - MER21B LTR ERV1 -3 860 847 1922 151 0 0 chr17 33153394 33153692 -56350861 - AluJb SINE Alu -14 298 1 877 212 102 33 chr17 33153692 33153920 -56350633 - MER21B LTR ERV1 -16 847 599 * 1195 164 25 0 chr17 33153885 33154086 -56350467 - MER7A DNA MER2_type -141 205 2 785 238 29 0 chr17 33154099 33154271 -56350282 + MER8 DNA MER2_type 3 179 -60 312 232 0 0 chr17 33154254 33154310 -56350243 + MER2 DNA MER2_type 290 345 0 * 189 147 0 0 chr17 33154513 33154547 -56350006 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1468 96 51 135 chr17 33154573 33154885 -56349668 + AluJb SINE Alu 11 296 -16 8028 48 35 1 chr17 33154968 33155261 -56349292 - LTR13 LTR ERVK 0 1007 725 195 42 0 0 chr17 33155261 33155285 -56349268 + (GA)n Simple_repeat Simple_repeat 2 25 0 8028 48 35 1 chr17 33155285 33155965 -56348588 - LTR13 LTR ERVK -282 725 1 508 260 118 44 chr17 33156060 33156264 -56348289 - MIR SINE MIR -31 231 13 228 246 0 33 chr17 33157498 33157559 -56346994 - MIR SINE MIR -8 254 196 394 264 23 0 chr17 33157559 33157646 -56346907 + L1MC4 LINE L1 6614 6702 -1340 380 273 0 40 chr17 33157577 33157676 -56346877 - L1MC4 LINE L1 -1339 6703 6609 * 230 116 23 0 chr17 33157676 33157719 -56346834 + (TA)n Simple_repeat Simple_repeat 1 44 0 990 165 6 0 chr17 33157719 33157877 -56346676 - AluJb SINE Alu -21 291 133 2128 91 14 3 chr17 33157882 33158179 -56346374 - AluSq SINE Alu -13 300 1 732 251 61 0 chr17 33158187 33158350 -56346203 - MIR SINE MIR -62 200 28 1150 171 49 68 chr17 33158356 33158521 -56346032 - AluJo SINE Alu -9 303 143 2077 117 0 0 chr17 33158521 33158819 -56345734 - AluSx SINE Alu -7 305 8 1150 171 49 68 chr17 33158819 33158917 -56345636 - AluJo SINE Alu -169 143 45 2248 96 0 0 chr17 33159235 33159528 -56345025 - AluSx SINE Alu -19 293 1 1589 168 20 3 chr17 33159536 33159833 -56344720 - AluJo SINE Alu -10 302 1 333 320 78 0 chr17 33160220 33160348 -56344205 - MIR SINE MIR -61 201 64 * 374 322 103 35 chr17 33160321 33160495 -56344058 + MIR3 SINE MIR 23 208 0 2306 27 0 44 chr17 33160805 33161124 -56343429 + AluY SINE Alu 1 306 0 672 286 44 36 chr17 33161165 33161413 -56343140 - MIR SINE MIR 0 262 13 184 309 29 0 chr17 33162027 33162095 -56342458 - L2 LINE L2 -62 3251 3182 222 237 175 93 chr17 33162095 33162192 -56342361 + MIR3 SINE MIR 60 164 -44 440 62 0 15 chr17 33162342 33162407 -56342146 + (CCG)n Simple_repeat Simple_repeat 2 65 0 29 0 0 0 chr17 33162473 33162502 -56342051 + GC_rich Low_complexity Low_complexity 1 29 0 205 191 0 0 chr17 33163928 33163970 -56340583 + T-rich Low_complexity Low_complexity 2 43 0 374 130 0 14 chr17 33164103 33164172 -56340381 - Alu SINE Alu 0 301 234 1948 101 40 0 chr17 33164174 33164450 -56340103 + AluSx SINE Alu 4 290 -22 834 168 0 7 chr17 33164471 33164608 -56339945 + AluJo SINE Alu 1 136 -176 1738 161 0 20 chr17 33164610 33164908 -56339645 + AluJo SINE Alu 1 292 -20 1821 151 0 10 chr17 33164920 33165211 -56339342 + AluSx SINE Alu 1 288 -24 186 373 93 8 chr17 33165401 33165519 -56339034 + L2 LINE L2 2572 2699 -615 23 0 0 0 chr17 33165519 33165542 -56339011 + AT_rich Low_complexity Low_complexity 1 23 0 254 158 0 0 chr17 33165542 33165580 -56338973 - LTR56 LTR ERV1 -56 389 352 1726 170 0 3 chr17 33165638 33165927 -56338626 + AluJo SINE Alu 1 288 -24 296 258 97 32 chr17 33165936 33166060 -56338493 + L2 LINE L2 2739 2870 -444 546 226 62 14 chr17 33166103 33166249 -56338304 + L2 LINE L2 3161 3313 0 2160 62 3 49 chr17 33166325 33166662 -56337891 - AluY SINE Alu 0 311 1 1418 108 126 83 chr17 33166670 33166947 -56337606 - AluSx SINE Alu -23 289 1 2017 141 0 0 chr17 33166952 33167249 -56337304 - AluSx SINE Alu -15 297 1 604 161 11 0 chr17 33167274 33167367 -56337186 + FLAM_C SINE Alu 26 119 -24 2046 103 10 0 chr17 33167446 33167738 -56336815 + AluSg SINE Alu 1 295 -15 2326 80 0 3 chr17 33167892 33168194 -56336359 + AluY SINE Alu 5 305 -6 40 67 0 0 chr17 33169102 33169177 -56335376 + AT_rich Low_complexity Low_complexity 1 75 0 577 103 0 0 chr17 33169418 33169496 -56335057 + AluJ/FLAM SINE Alu 3 80 -232 189 0 0 0 chr17 33169496 33169517 -56335036 + (TA)n Simple_repeat Simple_repeat 2 22 0 243 170 0 0 chr17 33169994 33170041 -56334512 + (CATA)n Simple_repeat Simple_repeat 4 50 0 304 174 0 0 chr17 33170042 33170088 -56334465 - L1MC4 LINE L1 -1339 6703 6658 1801 129 4 11 chr17 33170098 33170376 -56334177 - AluSx SINE Alu -36 276 1 23 0 0 0 chr17 33170376 33170399 -56334154 + AT_rich Low_complexity Low_complexity 1 23 0 225 0 0 0 chr17 33171284 33171309 -56333244 + (CTG)n Simple_repeat Simple_repeat 2 26 0 776 171 0 0 chr17 33171612 33171729 -56332824 + AluJb SINE Alu 158 274 -38 2303 82 0 3 chr17 33171926 33172232 -56332321 + AluSg SINE Alu 1 305 -5 323 228 40 20 chr17 33172819 33172920 -56331633 + MER50 LTR ERV1 502 604 -130 1803 177 7 0 chr17 33173122 33173427 -56331126 - AluJb SINE Alu -5 307 1 1680 171 3 3 chr17 33173703 33173996 -56330557 + AluJo SINE Alu 1 293 -19 879 159 0 0 chr17 33174347 33174479 -56330074 + FLAM_C SINE Alu 1 132 -1 1567 152 3 122 chr17 33174486 33174625 -56329928 + AluJb SINE Alu 1 155 -147 2277 74 0 23 chr17 33174625 33174935 -56329618 + AluY SINE Alu 1 303 -8 2016 112 3 7 chr17 33174942 33175236 -56329317 + AluSx SINE Alu 5 297 -15 1567 152 3 122 chr17 33175236 33175431 -56329122 + AluJb SINE Alu 161 302 0 2239 70 0 17 chr17 33175487 33175787 -56328766 - AluY SINE Alu -16 295 1 279 133 0 0 chr17 33175795 33175840 -56328713 + (T)n Simple_repeat Simple_repeat 1 45 0 1783 164 3 0 chr17 33175882 33176169 -56328384 - AluJb SINE Alu -24 288 1 426 175 38 0 chr17 33176169 33176249 -56328304 + Tigger5 DNA MER2_type 2241 2323 0 1762 140 0 47 chr17 33176598 33176898 -56327655 - AluJb SINE Alu -26 286 1 341 228 97 26 chr17 33177029 33177143 -56327410 - MIR SINE MIR -63 145 24 537 299 108 23 chr17 33177180 33177394 -56327159 - MIR SINE MIR -11 251 20 210 316 95 21 chr17 33177601 33177696 -56326857 - L2 LINE L2 -28 3244 3143 1767 122 22 11 chr17 33177857 33178127 -56326426 + AluSg SINE Alu 1 273 -37 1287 153 63 9 chr17 33178262 33178485 -56326068 - AluJb SINE Alu -77 235 1 236 119 0 0 chr17 33178752 33178794 -56325759 - Alu SINE Alu -2 300 259 2068 93 0 17 chr17 33178795 33179085 -56325468 - AluSc SINE Alu -24 285 1 7575 162 66 63 chr17 33179764 33181311 -56323242 + MER52A LTR ERV1 204 1755 0 1304 224 138 98 chr17 33181311 33181343 -56323210 - MER21B LTR ERV1 -159 704 675 2839 187 66 61 chr17 33181343 33182066 -56322487 - LTR8A LTR ERV1 0 727 1 1304 224 138 98 chr17 33182066 33182695 -56321858 - MER21B LTR ERV1 -188 675 17 22 56 0 0 chr17 33182717 33182753 -56321800 + AT_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr17 33183103 33183134 -56321419 + AT_rich Low_complexity Low_complexity 1 31 0 2188 113 3 3 chr17 33183777 33184087 -56320466 + AluSg SINE Alu 1 310 0 1958 73 0 0 chr17 33184202 33184447 -56320106 + AluSc SINE Alu 1 245 -64 1752 153 11 11 chr17 33184550 33184831 -56319722 + AluJb SINE Alu 11 291 -21 901 123 0 0 chr17 33184833 33184958 -56319595 + AluSx SINE Alu 1 122 -190 232 82 20 20 chr17 33184959 33185008 -56319545 + (CAAAA)n Simple_repeat Simple_repeat 4 52 0 2495 67 10 0 chr17 33185019 33185318 -56319235 + AluY SINE Alu 5 306 -5 1159 149 0 0 chr17 33185324 33185492 -56319061 + AluSx SINE Alu 128 295 -17 9086 95 40 62 chr17 33185756 33185859 -56318694 - Tigger1 DNA MER2_type 0 2418 2314 1952 156 0 10 chr17 33185859 33186161 -56318392 + AluSx SINE Alu 1 299 -13 9086 95 40 62 chr17 33186161 33187285 -56317268 - Tigger1 DNA MER2_type -104 2314 1226 1544 65 5 0 chr17 33187285 33187470 -56317083 - AluY SINE Alu -14 297 112 9086 95 40 62 chr17 33187470 33187727 -56316826 - Tigger1 DNA MER2_type -1192 1226 965 1494 206 14 0 chr17 33187732 33188009 -56316544 + AluJo SINE Alu 24 304 -8 1258 90 34 17 chr17 33188009 33188187 -56316366 + Tigger1 DNA MER2_type 1232 1412 -1006 180 77 0 0 chr17 33188198 33188224 -56316329 + (CA)n Simple_repeat Simple_repeat 1 26 0 1642 178 3 24 chr17 33188232 33188525 -56316028 - AluJo SINE Alu -20 292 6 270 167 36 0 chr17 33188529 33188613 -56315940 + (TA)n Simple_repeat Simple_repeat 2 88 0 288 282 77 17 chr17 33188713 33188830 -56315723 + MIR SINE MIR 19 142 -66 193 260 20 0 chr17 33188988 33189038 -56315515 - MIR3 SINE MIR -14 194 144 459 343 98 0 chr17 33189486 33189680 -56314873 + L1ME LINE L1 5499 5733 -388 1729 166 0 27 chr17 33189680 33189981 -56314572 + AluJb SINE Alu 1 293 -19 459 343 98 0 chr17 33189981 33190083 -56314470 + L1ME LINE L1 5733 5824 -297 2221 117 0 10 chr17 33190089 33190396 -56314157 + AluSx SINE Alu 1 304 -8 709 181 84 0 chr17 33190435 33190590 -56313963 - L1MB4 LINE L1 -6 6174 6007 27 49 0 0 chr17 33191076 33191117 -56313436 + AT_rich Low_complexity Low_complexity 1 41 0 987 193 0 0 chr17 33191175 33191346 -56313207 - FRAM SINE Alu -10 166 1 235 136 9 0 chr17 33191483 33191525 -56313028 + MIR SINE MIR 110 154 -54 192 216 0 0 chr17 33191793 33191830 -56312723 + MIR SINE MIR 156 192 -70 23 0 0 0 chr17 33192445 33192468 -56312085 + AT_rich Low_complexity Low_complexity 1 23 0 2209 93 10 0 chr17 33192507 33192797 -56311756 + AluSq SINE Alu 1 293 -20 1545 124 34 21 chr17 33193184 33193405 -56311148 - MER46A DNA MER2_type -2495 236 10 2053 113 11 0 chr17 33193405 33193689 -56310864 + AluSg SINE Alu 16 302 -8 1545 124 34 21 chr17 33193689 33193700 -56310853 - MER46A DNA MER2_type -2721 10 1 1313 162 61 4 chr17 33194099 33194377 -56310176 + MER33 DNA MER1_type 31 324 0 1455 165 4 20 chr17 33195410 33195659 -56308894 - AluSx SINE Alu -14 298 54 451 219 20 62 chr17 33196191 33196337 -56308216 - L1MC4 LINE L1 0 8042 7903 1792 160 11 4 chr17 33196499 33196827 -56307726 - AluSx SINE Alu 0 330 1 1010 193 20 5 chr17 33197132 33197334 -56307219 - MER3 DNA MER1_type -4 205 1 986 53 0 0 chr17 33197430 33197543 -56307010 + AluY SINE Alu 2 114 -197 2353 96 3 3 chr17 33197648 33197951 -56306602 - AluSq SINE Alu -2 311 9 416 133 12 60 chr17 33197951 33198034 -56306519 + MLT1F LTR MaLR 401 479 -63 5939 106 61 28 chr17 33198034 33200482 -56304071 + SVA Other Other 41 1381 -5 180 0 0 0 chr17 33200532 33200552 -56304001 + (A)n Simple_repeat Simple_repeat 1 20 0 1114 175 0 11 chr17 33200633 33200810 -56303743 - AluJo SINE Alu -128 184 10 278 311 73 89 chr17 33201042 33201357 -56303196 + L2 LINE L2 2294 2603 -711 561 150 165 8 chr17 33201428 33201561 -56302992 - L1MC5 LINE L1 -97 7864 7711 740 320 78 43 chr17 33201577 33202056 -56302497 + L2 LINE L2 2719 3221 -92 1476 170 88 32 chr17 33202056 33202339 -56302214 + AluJo SINE Alu 3 301 -11 740 320 78 43 chr17 33202339 33202432 -56302121 + L2 LINE L2 3221 3309 -4 25 0 0 0 chr17 33202524 33202549 -56302004 + AT_rich Low_complexity Low_complexity 1 25 0 2193 109 0 22 chr17 33203507 33203820 -56300733 - AluSx SINE Alu -6 306 1 2759 152 9 52 chr17 33203908 33204313 -56300240 - L1MB7 LINE L1 -16 6168 5790 2036 129 0 40 chr17 33204313 33204638 -56299915 - AluJo SINE Alu 0 312 1 2759 152 9 52 chr17 33204638 33204773 -56299780 - L1MB7 LINE L1 -394 5790 5651 901 211 7 0 chr17 33204774 33204926 -56299627 - FRAM SINE Alu -31 145 1 2191 129 3 0 chr17 33204933 33205244 -56299309 - AluSp SINE Alu -1 312 1 1809 169 3 3 chr17 33205252 33205542 -56299011 - AluJb SINE Alu -22 290 1 1874 160 3 16 chr17 33205544 33205856 -56298697 - AluJo SINE Alu -4 308 1 1707 136 49 43 chr17 33205856 33206202 -56298351 - L1MB7 LINE L1 -513 5667 5320 2257 74 0 7 chr17 33206215 33206499 -56298054 - AluY SINE Alu -29 282 1 1360 188 12 16 chr17 33206503 33206753 -56297800 - AluJo SINE Alu -20 292 44 21 0 0 0 chr17 33206793 33206814 -56297739 + AT_rich Low_complexity Low_complexity 1 21 0 626 158 67 42 chr17 33206819 33206839 -56297714 - FLAM_C SINE Alu -184 128 110 2173 127 3 0 chr17 33206839 33207139 -56297414 + AluSx SINE Alu 1 301 -11 626 158 67 42 chr17 33207139 33207238 -56297315 - FLAM_C SINE Alu -202 110 6 1478 231 55 25 chr17 33207367 33207415 -56297138 + Cheshire DNA MER1_type 37 82 -2338 2004 122 56 0 chr17 33207415 33207702 -56296851 - AluSx SINE Alu -9 303 1 1478 231 55 25 chr17 33207702 33208051 -56296502 + Cheshire DNA MER1_type 82 446 -1974 3434 161 60 2 chr17 33208066 33208679 -56295874 + Cheshire DNA MER1_type 1772 2420 0 2271 92 3 13 chr17 33208851 33209165 -56295388 + AluY SINE Alu 1 311 0 1798 121 111 4 chr17 33209559 33209839 -56294714 - AluSx SINE Alu -2 310 1 2221 117 0 0 chr17 33210006 33210305 -56294248 + AluY SINE Alu 1 299 -12 2175 110 7 0 chr17 33210634 33210926 -56293627 - AluSx SINE Alu -18 294 1 189 0 0 0 chr17 33212162 33212183 -56292370 + (T)n Simple_repeat Simple_repeat 1 21 0 2315 83 17 3 chr17 33212494 33212794 -56291759 - AluSc SINE Alu -5 304 1 786 141 33 8 chr17 33213975 33214096 -56290457 - FLAM_C SINE Alu -17 126 3 987 173 147 0 chr17 33214216 33214407 -56290146 - MER20 DNA MER1_type 0 219 1 2336 92 10 0 chr17 33214648 33214954 -56289599 - AluY SINE Alu -2 309 1 1221 190 107 76 chr17 33214954 33215243 -56289310 - AluJo SINE Alu -4 298 1 339 304 74 55 chr17 33215886 33216011 -56288542 + L2 LINE L2 2642 2763 -509 1704 177 0 32 chr17 33216011 33216321 -56288232 - AluJo SINE Alu -12 300 1 339 304 74 55 chr17 33216321 33216636 -56287917 + L2 LINE L2 2763 3112 -160 1695 81 5 9 chr17 33216671 33216893 -56287660 + AluSg SINE Alu 1 221 -89 785 225 0 0 chr17 33217526 33217699 -56286854 + AluSg/x SINE Alu 127 299 -11 191 270 95 108 chr17 33217699 33217795 -56286758 + L2 LINE L2 3123 3219 -53 2031 93 3 93 chr17 33217795 33217970 -56286583 - AluSq SINE Alu -21 292 158 2458 73 0 13 chr17 33217970 33218285 -56286268 - AluY SINE Alu 0 311 1 2031 93 3 93 chr17 33218285 33218430 -56286123 - AluSq SINE Alu -155 158 1 191 270 95 108 chr17 33218430 33218443 -56286110 + L2 LINE L2 3219 3231 -41 1852 135 11 14 chr17 33218443 33218752 -56285801 - AluJb SINE Alu 0 309 2 191 270 95 108 chr17 33218752 33218788 -56285765 + L2 LINE L2 3231 3268 -4 1903 153 7 16 chr17 33218984 33219292 -56285261 + AluJb SINE Alu 1 305 -7 23 78 0 0 chr17 33219433 33219484 -56285069 + AT_rich Low_complexity Low_complexity 1 51 0 929 75 8 0 chr17 33220501 33220621 -56283932 - AluY SINE Alu -12 299 179 291 306 66 10 chr17 33220627 33220823 -56283730 - L1ME4a LINE L1 -237 5884 5678 1699 171 0 54 chr17 33221035 33221351 -56283202 + AluJo SINE Alu 1 299 -13 295 294 66 15 chr17 33222241 33222438 -56282115 - L1ME4a LINE L1 -237 5884 5678 2063 119 0 0 chr17 33222460 33222768 -56281785 - AluSc SINE Alu 0 308 1 22 0 0 0 chr17 33223305 33223327 -56281226 + AT_rich Low_complexity Low_complexity 1 22 0 257 257 27 14 chr17 33223673 33223747 -56280806 + MIR SINE MIR 178 252 -10 1778 150 80 0 chr17 33223825 33224112 -56280441 - AluJb SINE Alu -2 310 1 700 145 61 46 chr17 33224646 33224777 -56279776 - FLAM_A SINE Alu 0 133 1 2309 78 37 0 chr17 33224828 33225123 -56279430 + AluSp SINE Alu 1 306 -7 32 43 0 0 chr17 33225163 33225209 -56279344 + AT_rich Low_complexity Low_complexity 1 46 0 2170 100 20 13 chr17 33225265 33225565 -56278988 + AluSx SINE Alu 1 302 -10 2599 30 123 15 chr17 33225597 33225931 -56278622 - L1PA8 LINE L1 0 6172 5803 21 0 0 0 chr17 33225935 33225956 -56278597 + AT_rich Low_complexity Low_complexity 1 21 0 399 96 0 0 chr17 33226085 33226137 -56278416 + MER66A LTR ERV1 287 338 -140 625 104 198 0 chr17 33226217 33226313 -56278240 + AluSp SINE Alu 2 116 -197 * 686 111 0 0 chr17 33226310 33226400 -56278153 - AluJ/FLAM SINE Alu -218 94 5 339 355 57 0 chr17 33226567 33226691 -56277862 + MIR SINE MIR 20 150 -112 1202 156 0 0 chr17 33226751 33226931 -56277622 - AluSq SINE Alu 0 313 134 2440 74 0 6 chr17 33227000 33227311 -56277242 - AluY SINE Alu -2 309 1 250 337 30 46 chr17 33227655 33227825 -56276728 - MER5B DNA MER1_type -2 187 6 330 327 7 3 chr17 33228010 33228178 -56276375 + L1ME LINE L1 5661 5817 -304 21 0 0 0 chr17 33229267 33229288 -56275265 + AT_rich Low_complexity Low_complexity 1 21 0 234 322 46 23 chr17 33230614 33230701 -56273852 + 5S rRNA rRNA 4 92 -29 241 338 0 0 chr17 33232493 33232564 -56271989 + MARNA DNA Mariner 88 158 -428 565 220 75 29 chr17 33232801 33232974 -56271579 - MARNA DNA Mariner -346 240 60 2312 284 131 38 chr17 33233088 33234290 -56270263 - L3 LINE CR1 -12 1565 253 908 244 127 65 chr17 33234730 33235037 -56269516 - MER102a DNA MER1_type -2 328 3 2072 117 43 0 chr17 33235453 33235752 -56268801 - AluSx SINE Alu 0 312 1 30 59 0 0 chr17 33236580 33236631 -56267922 + AT_rich Low_complexity Low_complexity 1 51 0 1997 61 0 0 chr17 33238033 33238279 -56266274 + AluSc SINE Alu 1 246 -63 362 208 10 10 chr17 33238543 33238639 -56265914 + AluSc SINE Alu 204 299 0 1979 133 3 3 chr17 33238696 33239026 -56265527 - AluSx SINE Alu 0 312 1 1607 165 0 57 chr17 33239070 33239386 -56265167 + AluJb SINE Alu 1 298 -14 1536 195 3 22 chr17 33239389 33239707 -56264846 + AluJo SINE Alu 1 312 0 576 172 10 0 chr17 33240187 33240286 -56264267 - FLAM_C SINE Alu -39 104 5 242 302 47 40 chr17 33240839 33240961 -56263592 + L1ME LINE L1 5617 5742 -379 1589 168 62 7 chr17 33240961 33241252 -56263301 + AluJo SINE Alu 1 307 -5 242 302 47 40 chr17 33241252 33241278 -56263275 + L1ME LINE L1 5742 5766 -355 1778 107 111 4 chr17 33241416 33241687 -56262866 + AluSx SINE Alu 1 300 -12 2107 121 0 19 chr17 33241949 33242263 -56262290 + AluSc SINE Alu 1 308 -1 696 190 0 0 chr17 33242702 33242823 -56261730 + FLAM_C SINE Alu 21 141 -2 2200 110 3 0 chr17 33244267 33244577 -56259976 - AluSx SINE Alu -1 311 1 22 0 0 0 chr17 33245447 33245469 -56259084 + AT_rich Low_complexity Low_complexity 1 22 0 2119 102 3 10 chr17 33246699 33247004 -56257549 + AluSq SINE Alu 1 303 -10 980 158 18 6 chr17 33247273 33247437 -56257116 - FRAM SINE Alu 0 166 1 1444 188 10 30 chr17 33247866 33248170 -56256383 - AluJb SINE Alu -14 298 1 1461 86 131 57 chr17 33248363 33248608 -56255945 - AluSx SINE Alu -13 299 37 24 0 0 0 chr17 33248615 33248639 -56255914 + AT_rich Low_complexity Low_complexity 1 24 0 1906 127 6 52 chr17 33249410 33249734 -56254819 + AluSx SINE Alu 1 309 -3 27 29 0 0 chr17 33250060 33250094 -56254459 + AT_rich Low_complexity Low_complexity 1 34 0 832 123 158 0 chr17 33250554 33250700 -56253853 - AluSg/x SINE Alu -17 295 127 2255 73 3 13 chr17 33250924 33251224 -56253329 - AluSq SINE Alu -16 297 1 1177 164 138 36 chr17 33251305 33251530 -56253023 - MER58B DNA MER1_type -2088 332 73 2086 97 17 0 chr17 33251530 33251818 -56252735 + AluSx SINE Alu 1 293 -19 1177 164 138 36 chr17 33251818 33251867 -56252686 - MER58B DNA MER1_type -2347 73 30 437 240 25 135 chr17 33252368 33252471 -56252082 - MIR3 SINE MIR -15 193 121 1866 86 20 0 chr17 33252471 33252726 -56251827 + AluY SINE Alu 6 265 -46 437 240 25 135 chr17 33252726 33252822 -56251731 - MIR3 SINE MIR -87 121 16 2410 80 0 3 chr17 33253456 33253770 -56250783 - AluSq SINE Alu 0 313 1 439 113 99 230 chr17 33253797 33254010 -56250543 + MER5A DNA MER1_type 5 189 0 188 298 206 7 chr17 33254237 33254378 -56250175 + L2 LINE L2 2849 3017 -255 384 209 250 7 chr17 33254379 33254527 -56250026 - HAL1 LINE L1 -1870 637 454 2226 92 0 0 chr17 33254746 33255039 -56249514 - AluSc SINE Alu -16 293 1 246 286 217 6 chr17 33255187 33255330 -56249223 + MIR SINE MIR 13 179 -29 2210 126 19 40 chr17 33255541 33255914 -56248639 - MLT1A1 LTR MaLR 0 365 1 429 313 49 6 chr17 33255968 33256131 -56248422 + L2 LINE L2 2040 2209 -1105 1678 163 7 13 chr17 33256131 33256431 -56248122 - AluJb SINE Alu -14 298 1 2541 156 19 89 chr17 33256499 33257063 -56247490 - L1MB5 LINE L1 -224 5950 5426 1577 162 47 136 chr17 33257057 33257273 -56247280 - L1MC4a LINE L1 -659 7149 6915 * 2480 68 0 0 chr17 33257273 33257581 -56246972 - AluSg SINE Alu -2 308 1 1577 162 47 136 chr17 33257581 33257900 -56246653 - L1MC4a LINE L1 -893 6915 6662 230 274 48 0 chr17 33257900 33257984 -56246569 + L2 LINE L2 2193 2280 -1034 2260 109 0 3 chr17 33258008 33258320 -56246233 - AluSx SINE Alu -1 311 1 454 287 218 33 chr17 33258425 33258685 -56245868 + L2 LINE L2 2511 2722 -592 2296 67 0 0 chr17 33258685 33259003 -56245550 - AluY SINE Alu 0 318 1 454 287 218 33 chr17 33259003 33259135 -56245418 + L2 LINE L2 2722 2977 -337 2085 114 7 0 chr17 33259248 33259546 -56245007 + AluSx SINE Alu 1 300 -12 965 152 9 0 chr17 33259592 33259849 -56244704 + CT-rich Low_complexity Low_complexity 2 434 0 2270 94 7 0 chr17 33259924 33260233 -56244320 + AluSp SINE Alu 1 311 -2 466 247 0 0 chr17 33260238 33260335 -56244218 + L2 LINE L2 3176 3272 0 2244 81 3 10 chr17 33260873 33261182 -56243371 + AluSx SINE Alu 1 307 -5 1289 229 7 3 chr17 33263886 33264174 -56240379 + AluJb SINE Alu 1 289 -13 342 17 58 67 chr17 33264181 33264301 -56240252 + (TA)n Simple_repeat Simple_repeat 2 120 0 2633 184 101 6 chr17 33264303 33264808 -56239745 - MLT1F1 LTR MaLR -9 558 6 357 253 11 0 chr17 33264818 33264909 -56239644 + L1MC4a LINE L1 5804 5895 -1913 2207 84 0 7 chr17 33264957 33265253 -56239300 + AluY SINE Alu 1 294 -17 23 0 0 0 chr17 33265253 33265276 -56239277 + AT_rich Low_complexity Low_complexity 1 23 0 23 78 0 0 chr17 33265425 33265476 -56239077 + AT_rich Low_complexity Low_complexity 1 51 0 1437 197 25 7 chr17 33265516 33265800 -56238753 - AluJo SINE Alu -17 295 7 330 164 209 0 chr17 33265838 33265905 -56238648 + AluJ/FRAM SINE Alu 222 302 0 605 279 267 6 chr17 33266055 33266273 -56238280 + L2 LINE L2 1415 1575 -1739 180 0 0 0 chr17 33266273 33266293 -56238260 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 605 279 267 6 chr17 33266293 33266400 -56238153 + L2 LINE L2 1575 1825 -1489 2554 145 25 50 chr17 33266405 33266824 -56237729 - L1MB7 LINE L1 -21 6163 5756 1801 113 73 0 chr17 33266824 33267099 -56237454 + AluSx SINE Alu 1 295 -17 2554 145 25 50 chr17 33267099 33267161 -56237392 - L1MB7 LINE L1 -428 5756 5694 1314 152 6 132 chr17 33267281 33267451 -56237102 - AluJb SINE Alu -13 299 109 204 40 0 0 chr17 33267451 33267476 -56237077 + (TTTC)n Simple_repeat Simple_repeat 3 27 0 2145 82 0 11 chr17 33267478 33267757 -56236796 - AluSp SINE Alu -37 276 1 1314 152 6 132 chr17 33267757 33267925 -56236628 - AluJb SINE Alu -204 108 1 1026 223 5 9 chr17 33267927 33268151 -56236402 - L1M4 LINE L1 -1905 4241 4019 1057 139 35 70 chr17 33268152 33268325 -56236228 - AluJb SINE Alu -5 307 142 2209 114 0 0 chr17 33268325 33268631 -56235922 - AluSx SINE Alu -6 306 1 1057 139 35 70 chr17 33268631 33268687 -56235866 - AluJb SINE Alu -170 142 86 1686 174 24 83 chr17 33268687 33269013 -56235540 - L1M4 LINE L1 -2120 4026 3682 2619 29 0 0 chr17 33269013 33269322 -56235231 - AluY SINE Alu -2 309 1 1686 174 24 83 chr17 33269322 33269373 -56235180 - L1M4 LINE L1 -2464 3682 3630 2278 84 0 0 chr17 33269373 33269670 -56234883 - AluY SINE Alu -14 297 1 1686 174 24 83 chr17 33269670 33269784 -56234769 - L1M4 LINE L1 -2516 3630 3563 2453 247 27 77 chr17 33269787 33270682 -56233871 + L2 LINE L2 1839 2688 -626 737 219 11 22 chr17 33270686 33270796 -56233757 - L1M4 LINE L1 -2187 3959 3850 1303 173 43 108 chr17 33270796 33271119 -56233434 - AluJo SINE Alu 0 302 1 737 219 11 22 chr17 33271119 33271186 -56233367 - L1M4 LINE L1 -2296 3850 3784 2313 96 3 3 chr17 33271397 33271710 -56232843 + AluSp SINE Alu 1 313 0 482 272 122 22 chr17 33271730 33271910 -56232643 - MIR SINE MIR -43 219 22 1591 150 24 14 chr17 33272500 33272794 -56231759 - AluJo SINE Alu -15 297 1 718 186 91 93 chr17 33273007 33273217 -56231336 - L1MC5 LINE L1 -50 7911 7702 180 0 0 0 chr17 33273217 33273237 -56231316 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 718 186 91 93 chr17 33273237 33273273 -56231280 - L1MC5 LINE L1 -259 7702 7667 1522 181 10 20 chr17 33273273 33273565 -56230988 + AluJb SINE Alu 1 289 -23 718 186 91 93 chr17 33273565 33273944 -56230609 - L1MC5 LINE L1 -294 7667 7190 1954 130 0 0 chr17 33274373 33274680 -56229873 - AluSq SINE Alu -1 312 6 1674 175 0 14 chr17 33274714 33275011 -56229542 - AluJo SINE Alu -2 310 18 2131 124 0 0 chr17 33275111 33275417 -56229136 - AluSx SINE Alu -6 306 1 369 250 189 30 chr17 33275566 33275730 -56228823 - MIR SINE MIR -6 256 67 1821 150 17 7 chr17 33276176 33276469 -56228084 + AluSx SINE Alu 1 296 -16 2387 41 0 14 chr17 33276625 33276919 -56227634 - AluY SINE Alu -21 290 1 397 322 142 19 chr17 33278242 33278509 -56226044 + L2 LINE L2 2919 3218 -54 533 299 51 0 chr17 33278555 33278732 -56225821 - MIR3 SINE MIR -1 207 22 2224 77 3 55 chr17 33278754 33279081 -56225472 + AluSp SINE Alu 2 311 -2 746 212 18 30 chr17 33279185 33279350 -56225203 - MIR3 SINE MIR -13 195 33 258 56 0 0 chr17 33279805 33279841 -56224712 + (CTG)n Simple_repeat Simple_repeat 3 38 0 262 314 0 0 chr17 33280046 33280116 -56224437 - L2 LINE L2 -1 3312 3243 2157 93 7 0 chr17 33280136 33280426 -56224127 + AluSx SINE Alu 15 306 -6 206 222 0 123 chr17 33280938 33281019 -56223534 + MIR SINE MIR 120 190 -72 406 367 80 21 chr17 33281187 33281424 -56223129 - L2 LINE L2 -1 3271 3021 1223 136 0 51 chr17 33281456 33281534 -56223019 - AluJo SINE Alu -109 203 123 2413 65 0 0 chr17 33281534 33281840 -56222713 - AluY SINE Alu -5 306 1 1223 136 0 51 chr17 33281840 33281975 -56222578 - AluJo SINE Alu -189 123 1 236 343 50 0 chr17 33283086 33283185 -56221368 + L2 LINE L2 3162 3265 -7 227 271 191 24 chr17 33283340 33283550 -56221003 + L2 LINE L2 2862 3106 -166 422 290 172 39 chr17 33284280 33284376 -56220177 + L2 LINE L2 2589 2671 -601 2224 71 3 7 chr17 33284376 33284673 -56219880 - AluY SINE Alu -15 296 1 422 290 172 39 chr17 33284673 33285164 -56219389 + L2 LINE L2 2671 3256 -16 41 78 0 0 chr17 33286691 33286781 -56217772 + GC_rich Low_complexity Low_complexity 1 90 0 229 269 6 57 chr17 33286834 33287009 -56217544 + G-rich Low_complexity Low_complexity 3 168 0 185 65 32 0 chr17 33288296 33288327 -56216226 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1899 166 0 0 chr17 33290008 33290310 -56214243 + AluJb SINE Alu 1 302 -10 423 185 49 0 chr17 33290987 33291068 -56213485 + AluJ/FLAM SINE Alu 2 86 -226 231 36 0 0 chr17 33291075 33291103 -56213450 + (A)n Simple_repeat Simple_repeat 1 28 0 747 146 0 32 chr17 33291870 33291993 -56212560 + FLAM_C SINE Alu 15 133 -10 219 348 35 0 chr17 33292411 33292519 -56212034 - MIR SINE MIR -78 130 48 478 256 128 6 chr17 33292890 33293046 -56211507 + MIR SINE MIR 16 190 -72 294 333 108 21 chr17 33293881 33293931 -56210622 - MIR3 SINE MIR 0 208 164 2256 102 0 3 chr17 33293931 33294244 -56210309 - AluSq SINE Alu -1 312 1 294 333 108 21 chr17 33294244 33294379 -56210174 - MIR3 SINE MIR -44 164 7 550 314 94 0 chr17 33294424 33294615 -56209938 + MIR SINE MIR 45 253 -9 2081 141 0 0 chr17 33294672 33294978 -56209575 - AluSx SINE Alu -6 306 1 773 172 0 30 chr17 33295526 33295660 -56208893 + FLAM_C SINE Alu 2 131 -12 396 252 0 0 chr17 33295729 33295852 -56208701 + (TG)n Simple_repeat Simple_repeat 2 124 0 264 297 166 0 chr17 33296942 33297087 -56207466 + MIR SINE MIR 38 206 -56 352 239 11 61 chr17 33297575 33297755 -56206798 + (CCCTAG)n Simple_repeat Simple_repeat 5 175 0 405 218 11 62 chr17 33297766 33297945 -56206608 + (CCCTAG)n Simple_repeat Simple_repeat 6 175 0 502 245 47 0 chr17 33298759 33298865 -56205688 + MER103 DNA DNA 9 119 -47 2172 97 7 3 chr17 33298958 33299256 -56205297 + AluSx SINE Alu 1 299 -13 524 268 55 6 chr17 33299553 33299717 -56204836 + MIR SINE MIR 21 192 -70 295 241 18 98 chr17 33299737 33299787 -56204766 + MER94 DNA DNA 25 63 -71 1579 184 10 26 chr17 33299787 33300092 -56204461 + AluJo SINE Alu 1 300 -12 295 241 18 98 chr17 33300092 33300153 -56204400 + MER94 DNA DNA 63 127 -7 190 286 39 39 chr17 33300690 33300767 -56203786 - MIR SINE MIR -116 146 70 201 196 0 0 chr17 33301772 33301823 -56202730 + CT-rich Low_complexity Low_complexity 1 51 0 578 263 78 69 chr17 33302872 33303089 -56201464 + MIR SINE MIR 44 262 0 1711 162 3 7 chr17 33303229 33303525 -56201028 + AluJo SINE Alu 1 295 -17 2417 60 0 0 chr17 33303569 33303867 -56200686 - AluY SINE Alu -13 298 1 2486 54 0 6 chr17 33304255 33304568 -56199985 - AluY SINE Alu 0 311 1 536 283 113 30 chr17 33304648 33304984 -56199569 - L2 LINE L2 -2 3270 2907 307 186 88 69 chr17 33305349 33305451 -56199102 + MIR3 SINE MIR 105 208 0 271 283 52 104 chr17 33305890 33306063 -56198490 - MLT1K LTR MaLR -132 456 293 359 191 0 12 chr17 33306063 33306147 -56198406 + GA-rich Low_complexity Low_complexity 3 85 0 253 310 190 13 chr17 33307367 33307525 -56197028 + MIR SINE MIR 3 188 -74 677 278 64 0 chr17 33307713 33307886 -56196667 + MER91A DNA MER1_type 3 186 -10 464 315 0 8 chr17 33307883 33308013 -56196540 + MIR SINE MIR 23 151 -111 * 185 286 259 0 chr17 33308034 33308146 -56196407 + L2 LINE L2 3104 3244 -28 464 242 225 50 chr17 33309127 33309367 -56195186 + L2 LINE L2 2989 3270 -2 593 294 14 28 chr17 33309400 33309611 -56194942 + MIR SINE MIR 55 262 0 304 286 79 21 chr17 33311183 33311323 -56193230 - MIR SINE MIR -25 237 90 1818 174 7 0 chr17 33311666 33311976 -56192577 + AluJo SINE Alu 1 312 0 2437 87 0 0 chr17 33311996 33312308 -56192245 + AluSx SINE Alu 1 312 0 1987 139 3 3 chr17 33312345 33312648 -56191905 + AluSx SINE Alu 1 303 -9 2224 103 0 0 chr17 33312713 33313015 -56191538 - AluSg SINE Alu -8 302 1 1977 113 13 0 chr17 33313180 33313480 -56191073 + L1MB3 LINE L1 5495 5798 -385 2048 113 10 0 chr17 33313481 33313772 -56190781 + AluSx SINE Alu 14 307 -5 568 116 70 0 chr17 33313778 33313864 -56190689 + AluJ/FLAM SINE Alu 2 93 -219 235 213 64 0 chr17 33313864 33313911 -56190642 + Alu SINE Alu 209 258 -42 2139 140 39 23 chr17 33313911 33314245 -56190308 + L1MB3 LINE L1 5792 6134 -49 2113 109 7 10 chr17 33314245 33314547 -56190006 + AluSx SINE Alu 1 301 -11 2139 140 39 23 chr17 33314547 33314598 -56189955 + L1MB3 LINE L1 6134 6183 0 2260 84 3 3 chr17 33314794 33315091 -56189462 + AluSp SINE Alu 4 300 -13 2168 67 9 61 chr17 33316890 33317218 -56187335 + AluY SINE Alu 1 311 0 2195 114 0 0 chr17 33317273 33317579 -56186974 - AluSg SINE Alu -4 306 1 1400 128 25 122 chr17 33317721 33318096 -56186457 - AluYb8 SINE Alu 0 344 1 2082 97 22 0 chr17 33318131 33318448 -56186105 + AluSx SINE Alu 1 323 0 246 292 161 0 chr17 33318467 33318597 -56185956 + MIR3 SINE MIR 10 160 -48 898 158 0 0 chr17 33318612 33318745 -56185808 - FLAM_C SINE Alu 0 133 1 257 289 78 11 chr17 33318864 33318954 -56185599 + L2 LINE L2 3121 3216 -56 330 87 0 0 chr17 33318974 33319020 -56185533 + (TGAA)n Simple_repeat Simple_repeat 1 46 0 281 289 67 67 chr17 33319354 33319588 -56184965 + MIR SINE MIR 2 237 -25 582 262 77 0 chr17 33320976 33321144 -56183409 - MIR SINE MIR -75 187 7 1955 139 0 19 chr17 33321211 33321521 -56183032 + AluJo SINE Alu 1 304 -8 290 359 98 16 chr17 33321609 33321793 -56182760 - MIR SINE MIR -4 258 60 2190 105 0 7 chr17 33321818 33322124 -56182429 - AluSg1 SINE Alu -4 305 2 826 128 8 8 chr17 33322231 33322364 -56182189 + FLAM_C SINE Alu 1 133 -10 350 164 60 0 chr17 33322414 33322481 -56182072 + L2 LINE L2 3242 3312 -1 2128 121 0 0 chr17 33322487 33322785 -56181768 + AluSq SINE Alu 4 301 -12 1979 117 0 35 chr17 33323292 33323477 -56181076 - AluSx SINE Alu -6 306 135 189 0 0 0 chr17 33323477 33323498 -56181055 + (TA)n Simple_repeat Simple_repeat 1 21 0 1979 117 0 35 chr17 33323498 33323629 -56180924 - AluSx SINE Alu -177 135 1 324 156 13 65 chr17 33323921 33323998 -56180555 - MIR SINE MIR -62 146 74 216 0 0 0 chr17 33324588 33324612 -56179941 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 350 320 154 23 chr17 33325373 33325548 -56179005 + MIR SINE MIR 15 212 -50 1911 149 10 10 chr17 33325781 33326090 -56178463 + AluJb SINE Alu 1 309 -3 219 186 0 0 chr17 33326090 33326133 -56178420 + GA-rich Low_complexity Low_complexity 1 43 0 1727 65 0 0 chr17 33326663 33326877 -56177676 + AluY SINE Alu 82 295 -16 490 256 77 0 chr17 33326917 33327073 -56177480 - MIR3 SINE MIR -10 198 31 2308 59 0 10 chr17 33327087 33327377 -56177176 + AluSc SINE Alu 1 287 -22 486 246 156 0 chr17 33327455 33327577 -56176976 + MIR SINE MIR 3 143 -119 1742 170 0 13 chr17 33327583 33327889 -56176664 + AluJb SINE Alu 1 302 -10 203 232 29 58 chr17 33328160 33328229 -56176324 + L2 LINE L2 3246 3312 -1 240 236 18 0 chr17 33328451 33328506 -56176047 + GA-rich Low_complexity Low_complexity 4 59 0 1505 150 15 108 chr17 33329246 33329579 -56174974 + AluJb SINE Alu 1 302 0 267 206 0 130 chr17 33329700 33329731 -56174822 - MER116 DNA Mariner 0 80 47 2140 102 0 14 chr17 33329731 33330024 -56174529 + AluSg SINE Alu 1 289 -21 267 206 0 130 chr17 33330024 33330084 -56174469 - MER116 DNA Mariner -33 47 1 333 0 0 0 chr17 33330125 33330162 -56174391 + (TG)n Simple_repeat Simple_repeat 1 37 0 191 325 67 75 chr17 33330201 33330216 -56174337 + MIR SINE MIR 20 34 -228 2336 80 3 0 chr17 33330216 33330515 -56174038 + AluSp SINE Alu 1 300 -13 191 325 67 75 chr17 33330515 33330619 -56173934 + MIR SINE MIR 34 138 -124 1809 117 110 0 chr17 33330713 33330994 -56173559 - AluSx SINE Alu 0 312 1 2185 81 3 26 chr17 33331245 33331383 -56173170 + AluY SINE Alu 1 141 -170 2191 98 0 0 chr17 33331383 33331680 -56172873 + AluSg SINE Alu 6 302 -8 2185 81 3 26 chr17 33331680 33331849 -56172704 + AluY SINE Alu 141 301 -10 262 228 114 61 chr17 33332459 33332573 -56171980 + MIR3 SINE MIR 46 165 -43 283 281 0 12 chr17 33332575 33332657 -56171896 - MER102a DNA MER1_type -8 322 242 476 176 63 94 chr17 33332734 33332893 -56171660 - MIR SINE MIR -11 251 98 1864 161 3 3 chr17 33333098 33333408 -56171145 + AluJo SINE Alu 1 310 -2 234 132 0 26 chr17 33333423 33333461 -56171092 + AluJo SINE Alu 1 37 -266 1879 142 10 7 chr17 33333461 33333763 -56170790 - AluSx SINE Alu -9 303 1 1599 159 30 7 chr17 33333765 33334035 -56170518 - AluJb SINE Alu -22 290 15 1676 168 4 0 chr17 33334040 33334308 -56170245 + AluJo SINE Alu 21 289 -23 2415 116 14 43 chr17 33334325 33334697 -56169856 - L1MB3 LINE L1 -3 6180 5820 2250 74 3 10 chr17 33334697 33334996 -56169557 - AluY SINE Alu -6 305 9 2415 116 14 43 chr17 33334996 33335037 -56169516 - L1MB3 LINE L1 -363 5820 5779 485 176 84 2 chr17 33335222 33335346 -56169207 - L1MB3 LINE L1 -380 5791 5651 544 71 0 0 chr17 33335357 33335427 -56169126 - AluJ/FLAM SINE Alu -241 71 2 242 343 120 30 chr17 33335441 33335674 -56168879 + L3 LINE CR1 1312 1565 -12 966 336 105 27 chr17 33336420 33337078 -56167475 - L3 LINE CR1 -11 1566 858 25 31 0 0 chr17 33337427 33337459 -56167094 + AT_rich Low_complexity Low_complexity 1 32 0 1538 171 7 23 chr17 33337459 33337763 -56166790 - AluJo SINE Alu -13 299 1 480 0 56 14 chr17 33337763 33337834 -56166719 + (TTTTA)n Simple_repeat Simple_repeat 2 75 0 2078 102 0 3 chr17 33337834 33338118 -56166435 - AluSx SINE Alu -29 283 1 238 159 0 0 chr17 33338128 33338172 -56166381 - L1ME3A LINE L1 0 6170 6127 440 335 72 22 chr17 33338593 33338871 -56165682 - L2 LINE L2 -463 2851 2560 1459 101 132 39 chr17 33338872 33339130 -56165423 + AluJo SINE Alu 1 282 -30 808 147 236 0 chr17 33339143 33339300 -56165253 + AluJo SINE Alu 118 311 -1 796 112 0 0 chr17 33339301 33339408 -56165145 + AluSq/x SINE Alu 2 108 -204 522 282 35 12 chr17 33339454 33339624 -56164929 - MIR SINE MIR -61 201 28 2554 43 0 0 chr17 33340086 33340390 -56164163 + AluY SINE Alu 1 304 -7 246 180 66 16 chr17 33340753 33340814 -56163739 + MIR SINE MIR 116 179 -83 1390 158 62 34 chr17 33340938 33341230 -56163323 + AluJb SINE Alu 3 302 -10 2124 97 17 0 chr17 33341270 33341569 -56162984 - AluSx SINE Alu -8 304 1 546 283 102 37 chr17 33341569 33341813 -56162740 + L2 LINE L2 3023 3282 -31 237 132 0 0 chr17 33343065 33343103 -56161450 + (TG)n Simple_repeat Simple_repeat 1 38 0 186 281 0 18 chr17 33343629 33343686 -56160867 - MIR3 SINE MIR -29 179 124 2197 92 3 3 chr17 33345861 33346165 -56158388 + AluSx SINE Alu 1 304 -8 2238 104 0 0 chr17 33346168 33346477 -56158076 + AluSg SINE Alu 1 309 -1 928 121 0 0 chr17 33346681 33346813 -56157740 + AluSq/x SINE Alu 2 133 -179 1934 105 14 4 chr17 33346817 33347138 -56157415 + AluSg SINE Alu 2 325 0 2278 94 3 0 chr17 33347300 33347609 -56156944 + AluSq SINE Alu 1 310 -3 2124 112 3 0 chr17 33347609 33347904 -56156649 + AluSp SINE Alu 4 299 -14 365 263 227 21 chr17 33347912 33348106 -56156447 - MIR SINE MIR -13 249 16 2120 81 4 0 chr17 33348335 33348608 -56155945 - AluSp SINE Alu -39 274 1 1611 167 28 0 chr17 33348610 33348897 -56155656 - AluJo SINE Alu -17 295 1 21 36 0 0 chr17 33349402 33349430 -56155123 + AT_rich Low_complexity Low_complexity 1 28 0 2160 116 0 0 chr17 33349554 33349864 -56154689 + AluY SINE Alu 1 310 -1 2475 51 0 0 chr17 33350015 33350311 -56154242 - AluY SINE Alu -15 296 1 674 128 145 17 chr17 33350344 33350461 -56154092 + FLAM_C SINE Alu 1 132 -1 2178 106 0 0 chr17 33350795 33351088 -56153465 - AluSx SINE Alu -19 293 1 2383 48 3 0 chr17 33351802 33352093 -56152460 - AluY SINE Alu -19 292 1 1973 109 32 0 chr17 33353102 33353387 -56151166 - AluSp SINE Alu -19 294 1 1703 179 0 7 chr17 33353433 33353730 -56150823 + AluJo SINE Alu 7 301 -11 1906 146 0 3 chr17 33353762 33354056 -56150497 - AluSx SINE Alu -19 293 1 325 85 17 17 chr17 33354513 33354572 -56149981 - AluSp/q SINE Alu -1 302 244 948 116 0 0 chr17 33354585 33354714 -56149839 - AluSq/x SINE Alu -183 129 1 607 278 104 16 chr17 33354967 33355323 -56149230 - L1ME2 LINE L1 -258 5906 5526 223 326 78 54 chr17 33356685 33356814 -56147739 + L2 LINE L2 3133 3264 -8 2147 123 0 0 chr17 33357157 33357459 -56147094 - AluJb SINE Alu -10 302 1 1825 141 23 26 chr17 33357809 33358115 -56146438 + AluJb SINE Alu 1 305 -7 1663 155 7 14 chr17 33358124 33358421 -56146132 + AluJo SINE Alu 1 295 -17 1751 100 60 0 chr17 33358551 33358802 -56145751 - AluSg SINE Alu -44 266 1 2356 94 0 0 chr17 33359754 33360061 -56144492 + AluSx SINE Alu 1 307 -5 226 314 91 25 chr17 33360091 33360212 -56144341 + MIR SINE MIR 34 162 -100 1179 144 5 63 chr17 33360323 33360545 -56144008 + AluJb SINE Alu 87 295 -17 685 225 121 0 chr17 33361077 33361259 -56143294 + L2 LINE L2 880 1083 -2231 2262 70 0 17 chr17 33361304 33361605 -56142948 + AluY SINE Alu 1 296 -15 1826 132 20 13 chr17 33361613 33361916 -56142637 + AluJb SINE Alu 1 305 -7 225 227 23 23 chr17 33362839 33362927 -56141626 + (CGGG)n Simple_repeat Simple_repeat 2 89 0 1155 126 0 11 chr17 33363599 33363774 -56140779 + AluSx SINE Alu 1 173 -139 466 144 22 11 chr17 33363775 33363865 -56140688 - MSTD-int LTR MaLR -1643 92 2 367 140 0 0 chr17 33363867 33363924 -56140629 - MSTD LTR MaLR 0 396 340 * 543 181 0 0 chr17 33363922 33364016 -56140537 - MSTC LTR MaLR -333 95 2 * 986 257 20 8 chr17 33364016 33364232 -56140321 + MLT1C LTR MaLR 214 432 -35 829 163 0 0 chr17 33365113 33365242 -56139311 - AluJb SINE Alu -181 131 3 1987 88 92 0 chr17 33365281 33365565 -56138988 + AluY SINE Alu 1 310 -1 2213 116 0 0 chr17 33365572 33365882 -56138671 + AluSg SINE Alu 1 310 0 458 249 56 56 chr17 33365950 33366141 -56138412 - HAL1 LINE L1 -737 1770 1579 2103 121 0 0 chr17 33366141 33366438 -56138115 + AluSg SINE Alu 1 297 -13 1497 87 0 0 chr17 33366495 33366690 -56137863 + AluSc SINE Alu 1 195 -114 736 102 0 0 chr17 33366691 33366789 -56137764 - AluSg SINE Alu -210 100 3 1568 146 101 0 chr17 33366792 33367080 -56137473 - L1MC3 LINE L1 -1001 6784 6468 1412 164 22 15 chr17 33367090 33367358 -56137195 + AluJo SINE Alu 7 276 -36 703 203 0 15 chr17 33367364 33367497 -56137056 - FLAM_C SINE Alu -2 131 1 2039 69 0 8 chr17 33367518 33367780 -56136773 - AluSc SINE Alu -11 298 39 730 186 158 130 chr17 33367822 33367891 -56136662 - MLT1A1 LTR MaLR 0 365 299 1930 140 0 29 chr17 33367891 33368206 -56136347 - AluSx SINE Alu -6 306 1 2164 104 0 10 chr17 33368211 33368519 -56136034 - AluSq SINE Alu 0 313 9 730 186 158 130 chr17 33368519 33368798 -56135755 - MLT1A1 LTR MaLR -69 296 1 670 197 14 21 chr17 33368812 33368954 -56135599 - FLAM_C SINE Alu -1 142 2 2233 84 0 16 chr17 33368960 33369268 -56135285 - AluSx SINE Alu -9 303 1 384 268 113 66 chr17 33369268 33369481 -56135072 + MIR SINE MIR 40 262 0 250 243 56 47 chr17 33369544 33369651 -56134902 - MIR SINE MIR -82 126 19 2218 86 0 10 chr17 33369813 33370114 -56134439 - AluSx SINE Alu -14 298 1 2033 79 7 0 chr17 33370247 33370559 -56133994 + AluSx SINE Alu 2 315 0 2122 75 20 7 chr17 33372922 33373215 -56131338 - AluSq SINE Alu -16 297 1 669 264 0 0 chr17 33373642 33373801 -56130752 - FRAM SINE Alu -13 163 5 2050 103 4 0 chr17 33373840 33374121 -56130432 + AluSg SINE Alu 1 282 -28 1720 107 21 107 chr17 33374445 33374782 -56129771 + AluSx SINE Alu 1 308 -4 247 209 0 0 chr17 33374815 33374858 -56129695 - Charlie5 DNA MER1_type -2407 205 163 1401 180 27 24 chr17 33374931 33375225 -56129328 - AluJo SINE Alu -17 295 1 1233 248 243 51 chr17 33375225 33375281 -56129272 - L2 LINE L2 -532 2782 2738 1381 171 109 7 chr17 33375281 33375555 -56128998 - AluSx SINE Alu -10 302 1 1973 105 14 10 chr17 33375565 33375859 -56128694 - AluSg SINE Alu -15 295 1 1233 248 243 51 chr17 33375859 33376060 -56128493 - L2 LINE L2 -583 2731 2570 1648 150 29 4 chr17 33376060 33376340 -56128213 + AluJb SINE Alu 1 287 -25 1233 248 243 51 chr17 33376340 33376948 -56127605 - L2 LINE L2 -744 2570 1737 183 125 25 25 chr17 33377378 33377418 -56127135 + L3 LINE CR1 1355 1394 -183 268 220 0 0 chr17 33377603 33377653 -56126900 - MER5A DNA MER1_type -1 188 139 1599 196 3 0 chr17 33377846 33378147 -56126406 + AluJb SINE Alu 1 302 -10 2264 82 0 0 chr17 33378257 33378592 -56125961 - AluSg SINE Alu 0 335 1 825 141 122 6 chr17 33378592 33378748 -56125805 - AluSg/x SINE Alu -5 307 134 1539 126 90 4 chr17 33378748 33379025 -56125528 - AluSx SINE Alu -11 301 1 592 321 94 5 chr17 33379158 33379382 -56125171 - MIR SINE MIR -10 252 9 586 150 0 33 chr17 33379614 33379734 -56124819 - AluSg/x SINE Alu -1 309 194 1809 147 3 25 chr17 33379734 33380048 -56124505 - AluSx SINE Alu -5 307 1 2209 111 0 0 chr17 33380050 33380356 -56124197 - AluSg SINE Alu -4 306 1 853 126 0 8 chr17 33380356 33380483 -56124070 - AluSq/x SINE Alu -176 136 11 1143 157 94 35 chr17 33380577 33380832 -56123721 + AluJo SINE Alu 12 281 -31 916 236 56 11 chr17 33381045 33381312 -56123241 + AluJo SINE Alu 19 297 -15 261 83 0 0 chr17 33383077 33383113 -56121440 + (TG)n Simple_repeat Simple_repeat 2 37 0 1308 191 10 41 chr17 33383114 33383408 -56121145 - AluJo SINE Alu -27 285 1 1798 98 0 0 chr17 33384097 33384333 -56120220 - AluSq SINE Alu -77 236 1 2178 86 30 0 chr17 33384475 33384776 -56119777 - AluSx SINE Alu -2 310 1 496 210 0 0 chr17 33384971 33385071 -56119482 - AluJb SINE Alu -5 307 208 234 114 0 91 chr17 33385071 33385115 -56119438 - Alu SINE Alu -262 40 1 2143 113 0 7 chr17 33385294 33385603 -56118950 - AluSg SINE Alu -3 307 1 37 23 0 0 chr17 33386520 33386564 -56117989 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr17 33386684 33386705 -56117848 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr17 33388185 33388231 -56116322 + (TA)n Simple_repeat Simple_repeat 1 46 0 2042 123 38 0 chr17 33389365 33389657 -56114896 + AluSx SINE Alu 1 303 -9 2154 88 10 10 chr17 33389666 33389963 -56114590 + AluSp SINE Alu 1 297 -16 1537 165 70 0 chr17 33392412 33392685 -56111868 + AluJo SINE Alu 1 292 -20 2371 82 0 0 chr17 33392964 33393257 -56111296 + AluY SINE Alu 1 293 -18 24 0 0 0 chr17 33394258 33394282 -56110271 + AT_rich Low_complexity Low_complexity 1 24 0 2088 121 0 10 chr17 33394848 33395145 -56109408 - AluSq SINE Alu -19 294 1 2353 94 7 0 chr17 33395155 33395462 -56109091 - AluY SINE Alu -2 309 1 22 35 0 0 chr17 33400166 33400195 -56104358 + AT_rich Low_complexity Low_complexity 1 29 0 2058 88 0 0 chr17 33401665 33401927 -56102626 + AluSx SINE Alu 46 307 -5 231 285 265 32 chr17 33403032 33403240 -56101313 + MIR SINE MIR 3 246 -16 675 211 32 32 chr17 33403919 33404075 -56100478 + FRAM SINE Alu 1 156 -10 2181 118 3 0 chr17 33404568 33404865 -56099688 + AluSg SINE Alu 3 300 -10 2062 103 48 0 chr17 33405720 33406012 -56098541 - AluY SINE Alu -5 306 1 291 257 101 37 chr17 33406365 33406474 -56098079 + L2 LINE L2 3149 3264 -8 1063 134 13 0 chr17 33406493 33406701 -56097852 - AluSg/x SINE Alu 0 343 134 2230 112 0 7 chr17 33406701 33407006 -56097547 - AluSg SINE Alu -6 304 2 329 277 24 0 chr17 33407338 33407421 -56097132 - MER102a DNA MER1_type 0 330 246 219 196 78 20 chr17 33407998 33408049 -56096504 + L2 LINE L2 3219 3272 0 1701 129 93 11 chr17 33408317 33408596 -56095957 + AluSx SINE Alu 1 302 -10 930 157 17 45 chr17 33408668 33408822 -56095731 + MER2 DNA MER2_type 4 161 -184 1631 169 16 33 chr17 33408822 33409129 -56095424 - AluJb SINE Alu -10 302 1 2161 120 0 0 chr17 33409138 33409437 -56095116 - AluSc SINE Alu -10 299 1 1070 168 86 19 chr17 33409437 33409646 -56094907 - MER44D DNA MER2_type -116 493 1 1007 123 0 0 chr17 33409686 33409832 -56094721 - AluSg/x SINE Alu -10 300 155 919 139 36 18 chr17 33410122 33410288 -56094265 - AluJb SINE Alu -23 289 121 1553 172 0 38 chr17 33410451 33410741 -56093812 + AluJb SINE Alu 13 291 -21 1545 160 0 8 chr17 33410918 33411156 -56093397 + AluJb SINE Alu 39 274 -38 2281 85 0 22 chr17 33411217 33411533 -56093020 - AluSg1 SINE Alu 0 309 1 2233 119 0 7 chr17 33411665 33411968 -56092585 - AluSg SINE Alu -9 301 1 2244 92 0 0 chr17 33411979 33412311 -56092242 - AluY SINE Alu 0 332 1 1880 89 0 45 chr17 33412735 33413004 -56091549 + AluSx SINE Alu 19 275 -37 1951 126 3 26 chr17 33413007 33413309 -56091244 - AluSc SINE Alu -13 296 2 213 39 0 0 chr17 33413324 33413350 -56091203 + (A)n Simple_repeat Simple_repeat 1 26 0 2076 95 7 17 chr17 33413355 33413650 -56090903 + AluSq SINE Alu 3 294 -19 960 244 106 18 chr17 33413671 33414068 -56090485 - L1ME3 LINE L1 -302 5860 5429 1674 180 0 10 chr17 33414182 33414477 -56090076 + AluJb SINE Alu 1 292 -20 822 253 107 49 chr17 33414522 33414928 -56089625 - L2 LINE L2 0 3313 2883 744 194 8 0 chr17 33414928 33415052 -56089501 + FLAM_A SINE Alu 3 127 -6 2146 89 31 3 chr17 33415070 33415363 -56089190 + AluSp SINE Alu 1 301 -12 2228 105 0 10 chr17 33415410 33415716 -56088837 - AluSc SINE Alu -6 303 1 1878 145 50 7 chr17 33415754 33416051 -56088502 - AluSg SINE Alu 0 310 1 1794 96 36 16 chr17 33416447 33416697 -56087856 - AluSx SINE Alu -4 308 54 28 71 0 0 chr17 33416911 33416967 -56087586 + AT_rich Low_complexity Low_complexity 1 56 0 2179 122 26 0 chr17 33417098 33417401 -56087152 + AluSx SINE Alu 1 311 -1 2423 66 13 7 chr17 33417877 33418179 -56086374 + AluY SINE Alu 1 304 -7 1909 146 34 0 chr17 33418269 33418564 -56085989 + AluJb SINE Alu 1 305 -7 1722 139 59 31 chr17 33418763 33419051 -56085502 - AluJb SINE Alu -16 296 1 2031 153 7 0 chr17 33419059 33419353 -56085200 - AluSx SINE Alu -16 296 1 23 0 0 0 chr17 33419355 33419378 -56085175 + AT_rich Low_complexity Low_complexity 1 23 0 1071 163 59 5 chr17 33419410 33419612 -56084941 - Charlie1a DNA MER1_type -226 1229 1017 * 2838 187 59 3 chr17 33419606 33420178 -56084375 - Charlie1a DNA MER1_type -813 642 39 1111 176 21 16 chr17 33420494 33420687 -56083866 + AluJo SINE Alu 89 282 -30 1868 115 67 4 chr17 33420820 33421090 -56083463 + AluSq SINE Alu 1 287 -26 1616 166 0 80 chr17 33421149 33421475 -56083078 - AluJo SINE Alu -12 300 1 896 211 0 0 chr17 33421594 33421755 -56082798 - FRAM SINE Alu -15 161 1 2162 112 17 3 chr17 33421762 33422057 -56082496 - AluSx SINE Alu -12 300 2 447 19 0 0 chr17 33422057 33422109 -56082444 + (TCTA)n Simple_repeat Simple_repeat 4 55 0 2229 119 0 0 chr17 33422109 33422395 -56082158 - AluSx SINE Alu -26 286 1 2209 125 0 3 chr17 33422442 33422745 -56081808 - AluSq SINE Alu -11 302 1 189 0 0 0 chr17 33422745 33422766 -56081787 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1864 133 37 0 chr17 33422766 33423037 -56081516 - AluSg SINE Alu -29 281 1 207 100 0 0 chr17 33423039 33423069 -56081484 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1838 130 14 25 chr17 33423074 33423359 -56081194 - AluJo SINE Alu -30 282 1 2057 140 3 10 chr17 33423626 33423926 -56080627 - AluSq SINE Alu -15 298 1 23 33 0 0 chr17 33424351 33424381 -56080172 + AT_rich Low_complexity Low_complexity 1 30 0 322 270 54 0 chr17 33424409 33424520 -56080033 + L1M4 LINE L1 4605 4721 -1425 230 266 78 16 chr17 33424556 33424620 -56079933 + L2 LINE L2 3203 3270 -2 214 309 24 36 chr17 33425298 33425382 -56079171 - L2 LINE L2 -1 3312 3230 2033 119 14 0 chr17 33425609 33425895 -56078658 - AluSx SINE Alu -18 294 5 1988 134 17 3 chr17 33425913 33426205 -56078348 - AluSx SINE Alu -12 300 5 2211 115 0 3 chr17 33426747 33427042 -56077511 + AluSx SINE Alu 1 294 -18 2307 96 3 3 chr17 33427146 33427448 -56077105 + AluSc SINE Alu 1 302 -7 676 239 8 0 chr17 33427927 33428057 -56076496 - FLAM_A SINE Alu -1 132 2 328 260 147 80 chr17 33428117 33428194 -56076359 + MIR SINE MIR 77 147 -115 1859 159 7 0 chr17 33428194 33428483 -56076070 + AluJo SINE Alu 1 291 -21 328 260 147 80 chr17 33428483 33428555 -56075998 + MIR SINE MIR 147 236 -26 369 198 35 0 chr17 33428674 33428758 -56075795 + AluSp SINE Alu 124 191 -112 1948 131 31 3 chr17 33428816 33429106 -56075447 + AluJb SINE Alu 5 302 -10 899 150 0 8 chr17 33429454 33429587 -56074966 + FLAM_C SINE Alu 1 132 -1 2253 103 7 3 chr17 33429952 33430262 -56074291 - AluSx SINE Alu -1 311 1 241 242 0 16 chr17 33430473 33430535 -56074018 + MIR SINE MIR 152 212 -50 3480 33 0 8 chr17 33430855 33431252 -56073301 - L1PA4 LINE L1 -3 6152 5759 1692 174 7 11 chr17 33431737 33432040 -56072513 + AluJo SINE Alu 1 302 0 942 115 0 8 chr17 33432373 33432495 -56072058 + FLAM_C SINE Alu 1 121 -12 25 0 0 0 chr17 33432500 33432525 -56072028 + AT_rich Low_complexity Low_complexity 1 25 0 2323 101 0 19 chr17 33432562 33432879 -56071674 - AluSx SINE Alu -1 311 1 22 43 0 21 chr17 33432882 33432896 -56071657 + AT_rich Low_complexity Low_complexity 1 14 -32 820 178 0 0 chr17 33432896 33433014 -56071539 - FLAM_C SINE Alu -15 118 1 22 43 0 21 chr17 33433014 33433046 -56071507 + AT_rich Low_complexity Low_complexity 14 46 0 2042 100 50 30 chr17 33433051 33433297 -56071256 + AluSq SINE Alu 1 256 -57 194 81 27 0 chr17 33433297 33433334 -56071219 + (CACTT)n Simple_repeat Simple_repeat 5 42 0 2042 100 50 30 chr17 33433334 33433388 -56071165 + AluSq SINE Alu 256 307 -6 2278 112 0 0 chr17 33433388 33433682 -56070871 + AluSx SINE Alu 1 294 -18 281 95 0 0 chr17 33433682 33433724 -56070829 + L1MA4 LINE L1 6079 6120 -180 1150 127 73 54 chr17 33433724 33433929 -56070624 + AluJo SINE Alu 87 295 -17 1124 108 81 11 chr17 33433931 33434116 -56070437 + L1MA4 LINE L1 6103 6300 0 316 183 77 48 chr17 33434118 33434222 -56070331 - HAL1b LINE L1 -128 1220 1114 2138 132 0 10 chr17 33434530 33434841 -56069712 - AluSg SINE Alu -2 308 1 22 35 0 0 chr17 33434996 33435025 -56069528 + AT_rich Low_complexity Low_complexity 1 29 0 2246 93 0 50 chr17 33435787 33436108 -56068445 + AluSq SINE Alu 1 305 -8 364 239 84 59 chr17 33436173 33436412 -56068141 + L1ME3A LINE L1 895 1139 -4980 226 267 40 50 chr17 33436541 33436642 -56067911 + MLT1J LTR MaLR 110 209 -302 345 200 178 0 chr17 33436683 33436773 -56067780 + MLT1L LTR MaLR 340 445 -170 2170 108 3 46 chr17 33436793 33437118 -56067435 - AluSq SINE Alu -2 311 1 1035 90 0 8 chr17 33437122 33437255 -56067298 - AluSq/x SINE Alu -180 132 1 533 309 104 30 chr17 33437280 33437779 -56066774 - L1 LINE L1 -914 5232 4697 932 136 0 0 chr17 33437811 33437936 -56066617 - FLAM_C SINE Alu -18 125 1 1999 168 0 0 chr17 33438012 33438322 -56066231 - AluJb SINE Alu -2 310 1 1958 161 7 0 chr17 33438519 33438817 -56065736 - AluJb SINE Alu -11 301 2 1634 101 3 80 chr17 33438856 33439103 -56065450 - L1PA16 LINE L1 -110 6056 5832 2116 99 26 26 chr17 33439103 33439415 -56065138 - AluSx SINE Alu 0 312 1 1634 101 3 80 chr17 33439415 33439455 -56065098 - L1PA16 LINE L1 -334 5832 5791 317 313 112 27 chr17 33439507 33439731 -56064822 + L1ME3A LINE L1 2192 2434 -3695 465 273 88 71 chr17 33439846 33439973 -56064580 + L1ME3A LINE L1 5476 5599 -554 2384 106 0 0 chr17 33439973 33440275 -56064278 + AluSx SINE Alu 3 304 -8 465 273 88 71 chr17 33440275 33440564 -56063989 + L1ME3A LINE L1 5599 5838 -315 21 36 0 0 chr17 33440720 33440748 -56063805 + AT_rich Low_complexity Low_complexity 1 28 0 1701 128 124 0 chr17 33440755 33441020 -56063533 + AluSx SINE Alu 1 298 -4 1340 135 90 132 chr17 33441085 33441396 -56063157 - AluJo SINE Alu -10 302 5 2387 239 68 55 chr17 33441454 33442457 -56062096 - HAL1b LINE L1 -270 1078 60 2447 80 0 10 chr17 33442457 33442769 -56061784 - AluSc SINE Alu 0 309 1 2387 239 68 55 chr17 33442769 33442830 -56061723 - HAL1b LINE L1 -1288 60 1 2365 97 0 0 chr17 33442950 33443249 -56061304 + AluSx SINE Alu 1 299 -13 233 257 129 0 chr17 33443350 33443420 -56061133 - HAL1 LINE L1 -856 1651 1573 1964 153 0 25 chr17 33443425 33443745 -56060808 - AluJb SINE Alu 0 312 1 22 0 0 0 chr17 33443759 33443781 -56060772 + AT_rich Low_complexity Low_complexity 1 22 0 379 245 115 46 chr17 33443787 33444048 -56060505 - HAL1 LINE L1 -1415 1092 814 2213 118 0 0 chr17 33444295 33444583 -56059970 - AluSx SINE Alu -24 288 1 380 258 40 96 chr17 33444698 33444734 -56059819 + L1MEd LINE L1 3056 3092 -3037 1761 61 0 9 chr17 33444734 33444946 -56059607 + AluY SINE Alu 1 210 -101 380 258 40 96 chr17 33444946 33444974 -56059579 + L1MEd LINE L1 3092 3120 -3009 1407 183 30 50 chr17 33444974 33445275 -56059278 + AluJo SINE Alu 1 295 -17 380 258 40 96 chr17 33445275 33445511 -56059042 + L1MEd LINE L1 3120 3340 -2789 24 0 0 0 chr17 33445511 33445535 -56059018 + AT_rich Low_complexity Low_complexity 1 24 0 791 119 0 98 chr17 33445535 33445560 -56058993 - FLAM_C SINE Alu -173 129 103 1972 137 7 0 chr17 33445560 33445838 -56058715 + AluSx SINE Alu 1 280 -32 341 0 45 0 chr17 33445838 33445882 -56058671 + (TAAAA)n Simple_repeat Simple_repeat 5 50 0 791 119 0 98 chr17 33445882 33445998 -56058555 - FLAM_C SINE Alu -197 105 1 263 115 0 19 chr17 33446080 33446098 -56058455 + (GAA)n Simple_repeat Simple_repeat 2 19 -33 866 132 16 0 chr17 33446098 33446227 -56058326 + FLAM_C SINE Alu 3 133 0 263 115 0 19 chr17 33446227 33446260 -56058293 + (GAA)n Simple_repeat Simple_repeat 19 52 0 2177 97 7 17 chr17 33446274 33446603 -56057950 + AluSq SINE Alu 1 326 0 23 78 0 0 chr17 33446913 33446964 -56057589 + AT_rich Low_complexity Low_complexity 1 51 0 2026 138 3 3 chr17 33447080 33447378 -56057175 + AluSx SINE Alu 1 298 -14 1138 124 0 0 chr17 33447380 33447541 -56057012 + AluSg/x SINE Alu 150 310 0 22 0 0 0 chr17 33447545 33447567 -56056986 + AT_rich Low_complexity Low_complexity 1 22 0 1031 91 12 48 chr17 33447659 33447824 -56056729 - AluSp/q SINE Alu -1 312 154 43 99 0 0 chr17 33447934 33448075 -56056478 + AT_rich Low_complexity Low_complexity 1 141 0 304 191 0 0 chr17 33448079 33448142 -56056411 - FLAM_A SINE Alu 0 133 71 1444 118 10 10 chr17 33448145 33448348 -56056205 - AluSx SINE Alu -109 203 1 407 226 113 16 chr17 33448352 33448476 -56056077 + L2 LINE L2 3178 3313 0 1998 142 14 3 chr17 33448489 33448814 -56055739 + AluSx SINE Alu 1 328 0 697 199 138 69 chr17 33448826 33449032 -56055521 + AluJo SINE Alu 50 277 -35 2468 97 0 0 chr17 33449032 33449342 -56055211 + AluSg SINE Alu 1 310 0 697 199 138 69 chr17 33449342 33449381 -56055172 + AluJo SINE Alu 277 312 0 1849 140 186 14 chr17 33449444 33449809 -56054744 + MSTA LTR MaLR 1 428 0 9350 137 25 38 chr17 33449811 33451409 -56053144 + MSTA-int LTR MaLR 3 1580 0 1837 134 171 45 chr17 33451409 33451716 -56052837 + MSTA LTR MaLR 1 366 -62 2189 126 3 0 chr17 33451716 33452017 -56052536 - AluSx SINE Alu -10 302 1 1837 134 171 45 chr17 33452017 33452089 -56052464 + MSTA LTR MaLR 366 428 0 497 309 24 6 chr17 33452094 33452259 -56052294 + L1MEd LINE L1 220 387 -5732 1291 133 69 39 chr17 33452392 33452433 -56052120 - MSTA LTR MaLR 0 426 388 2201 128 0 7 chr17 33452433 33452739 -56051814 + AluSx SINE Alu 1 304 -8 1291 133 69 39 chr17 33452739 33452930 -56051623 - MSTA LTR MaLR -38 388 187 246 87 0 0 chr17 33452939 33452985 -56051568 - LTR66 LTR ERVL -171 439 394 243 146 0 0 chr17 33452985 33453026 -56051527 + (TA)n Simple_repeat Simple_repeat 1 41 0 2432 92 0 3 chr17 33453026 33453329 -56051224 - AluSc SINE Alu -7 302 1 29 0 0 0 chr17 33453334 33453363 -56051190 + AT_rich Low_complexity Low_complexity 1 29 0 1399 129 0 0 chr17 33453370 33453556 -56050997 - AluSq SINE Alu -127 186 1 1344 121 15 0 chr17 33453557 33453755 -56050798 - MSTA LTR MaLR -227 201 1 634 261 63 8 chr17 33453862 33454115 -56050438 + L1MEd LINE L1 638 904 -5215 26 74 0 0 chr17 33454143 33454197 -56050356 + AT_rich Low_complexity Low_complexity 1 54 0 2329 83 3 0 chr17 33454199 33454489 -56050064 + AluSp SINE Alu 3 293 -20 21 36 0 0 chr17 33454527 33454555 -56049998 + AT_rich Low_complexity Low_complexity 1 28 0 1277 166 64 58 chr17 33454582 33454647 -56049906 - Charlie1b DNA MER1_type -2446 315 252 2443 49 7 0 chr17 33454647 33454932 -56049621 - AluY SINE Alu -24 287 1 1277 166 64 58 chr17 33454932 33455179 -56049374 - Charlie1b DNA MER1_type -2509 252 1 257 337 0 0 chr17 33455180 33455272 -56049281 - MIR3 SINE MIR -49 159 68 48 0 0 0 chr17 33455408 33455456 -56049097 + AT_rich Low_complexity Low_complexity 1 48 0 2125 116 0 17 chr17 33456419 33456559 -56047994 + AluSx SINE Alu 1 142 -170 189 0 0 0 chr17 33456559 33456580 -56047973 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2125 116 0 17 chr17 33456580 33456741 -56047812 + AluSx SINE Alu 142 297 -15 276 276 28 21 chr17 33456748 33456893 -56047660 + L1MEd LINE L1 955 1100 -5019 1089 158 187 26 chr17 33456902 33457175 -56047378 - MER33 DNA MER1_type -7 317 1 460 241 41 28 chr17 33457175 33457320 -56047233 + L1MEd LINE L1 1110 1256 -4863 313 204 102 10 chr17 33457424 33457522 -56047031 + HAL1 LINE L1 1530 1636 -871 487 76 0 152 chr17 33457776 33457835 -56046718 + MER41D LTR ERV1 2 44 -513 2343 95 0 0 chr17 33457835 33458130 -56046423 - AluSq SINE Alu -18 295 1 487 76 0 152 chr17 33458130 33458162 -56046391 + MER41D LTR ERV1 44 79 -478 2216 101 0 3 chr17 33458166 33458454 -56046099 + AluSq SINE Alu 7 293 -20 1230 101 25 0 chr17 33458454 33458613 -56045940 + AluSp SINE Alu 134 296 -17 2783 146 15 40 chr17 33458617 33459095 -56045458 + MER41D LTR ERV1 92 557 0 2175 114 7 0 chr17 33459424 33459730 -56044823 + AluSp SINE Alu 1 308 -5 211 261 72 112 chr17 33459876 33459962 -56044591 - MIR SINE MIR -2 260 172 638 207 66 0 chr17 33459962 33460083 -56044470 + FLAM_A SINE Alu 1 129 -4 211 261 72 112 chr17 33460083 33460113 -56044440 - MIR SINE MIR -90 172 142 494 102 0 136 chr17 33460113 33460177 -56044376 - L1MB3 LINE L1 -7 6176 6134 2238 118 0 9 chr17 33460177 33460492 -56044061 + AluSx SINE Alu 1 312 0 494 102 0 136 chr17 33460492 33460545 -56044008 - L1MB3 LINE L1 -49 6134 6075 211 261 72 112 chr17 33460545 33460676 -56043877 - MIR SINE MIR -120 142 22 1836 125 6 83 chr17 33460739 33460883 -56043670 + AluJo SINE Alu 1 155 -157 2341 85 0 0 chr17 33460883 33461176 -56043377 + AluY SINE Alu 6 298 -13 1836 125 6 83 chr17 33461176 33461333 -56043220 + AluJo SINE Alu 155 276 -36 2265 106 3 0 chr17 33461333 33461625 -56042928 - AluSx SINE Alu -19 293 1 1836 125 6 83 chr17 33461625 33461658 -56042895 + AluJo SINE Alu 276 310 -2 29 28 0 0 chr17 33461659 33461695 -56042858 + AT_rich Low_complexity Low_complexity 1 36 0 217 326 41 62 chr17 33461710 33462028 -56042525 - L2 LINE L2 -168 3145 2782 267 81 0 27 chr17 33462289 33462326 -56042227 - Alu SINE Alu -254 48 13 342 232 24 0 chr17 33462330 33462412 -56042141 - MIR SINE MIR -110 152 69 2230 107 0 7 chr17 33462501 33462791 -56041762 - AluSg SINE Alu -22 288 1 2288 117 6 3 chr17 33463596 33463930 -56040623 + MER1B DNA MER1_type 3 337 0 1374 102 16 0 chr17 33463995 33464181 -56040372 - AluJo SINE Alu -118 194 6 278 339 31 16 chr17 33464185 33464312 -56040241 - L3 LINE CR1 -36 1541 1413 195 310 95 32 chr17 33464506 33464664 -56039889 - L3 LINE CR1 -157 1420 1253 240 143 0 0 chr17 33464713 33464755 -56039798 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 203 215 15 46 chr17 33465425 33465490 -56039063 + (CGG)n Simple_repeat Simple_repeat 1 63 0 24 32 0 0 chr17 33465567 33465598 -56038955 + GC_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 33465675 33465696 -56038857 + GC_rich Low_complexity Low_complexity 1 21 0 2332 113 0 0 chr17 33468813 33469123 -56035430 - AluSg SINE Alu 0 310 1 2186 107 3 28 chr17 33469300 33469617 -56034936 - AluSq SINE Alu -4 309 1 687 233 78 5 chr17 33469625 33469818 -56034735 - MIR SINE MIR -42 220 14 2006 152 0 0 chr17 33470067 33470356 -56034197 + AluJo SINE Alu 1 289 -23 1308 161 0 0 chr17 33471013 33471205 -56033348 - AluSq SINE Alu -121 192 1 2167 95 0 39 chr17 33471205 33471511 -56033042 - AluSx SINE Alu -18 294 1 671 158 0 47 chr17 33471724 33471851 -56032702 + FLAM_C SINE Alu 5 125 -18 1265 181 4 9 chr17 33471867 33472093 -56032460 + AluJb SINE Alu 86 310 -2 1794 163 33 0 chr17 33472677 33472974 -56031579 - AluJb SINE Alu 0 306 1 912 181 94 0 chr17 33473024 33473195 -56031358 + MER58A DNA MER1_type 38 224 0 1047 287 161 39 chr17 33473282 33473996 -56030557 + L3 LINE CR1 522 1322 -255 434 262 55 48 chr17 33476260 33476405 -56028148 - L2 LINE L2 -16 3297 3152 2628 53 0 3 chr17 33476808 33477110 -56027443 + AluY SINE Alu 3 303 -8 2210 116 0 10 chr17 33477317 33477483 -56027070 - AluSq SINE Alu -13 300 137 2415 62 0 7 chr17 33477483 33477775 -56026778 - AluY SINE Alu -21 290 1 2210 116 0 10 chr17 33477775 33477911 -56026642 - AluSq SINE Alu -176 137 1 1897 155 14 0 chr17 33478184 33478480 -56026073 - AluJb SINE Alu -12 300 1 2316 104 0 0 chr17 33478746 33479043 -56025510 - AluSg SINE Alu -13 297 1 272 188 29 14 chr17 33479784 33479853 -56024700 + L2 LINE L2 2996 3065 -248 1065 132 11 40 chr17 33479882 33480056 -56024497 + AluSg/x SINE Alu 126 294 -18 246 62 0 0 chr17 33480056 33480088 -56024465 + (TA)n Simple_repeat Simple_repeat 2 33 0 1557 172 20 0 chr17 33480214 33480331 -56024222 - AluJb SINE Alu -63 249 136 225 0 0 0 chr17 33480331 33480356 -56024197 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1557 172 20 0 chr17 33480356 33480482 -56024071 - AluJb SINE Alu -176 136 1 1617 124 151 0 chr17 33480613 33480871 -56023682 - AluSx SINE Alu -5 297 1 1597 197 3 10 chr17 33481009 33481303 -56023250 - AluJo SINE Alu -18 294 3 2128 75 65 0 chr17 33481437 33481715 -56022838 + AluY SINE Alu 1 296 -15 2281 98 0 3 chr17 33482026 33482321 -56022232 - AluSg SINE Alu -16 294 1 1456 118 15 0 chr17 33482339 33482543 -56022010 + AluSq SINE Alu 104 310 -3 2318 108 0 3 chr17 33483626 33483932 -56020621 - AluSp SINE Alu -8 305 1 29 0 0 0 chr17 33484291 33484320 -56020233 + AT_rich Low_complexity Low_complexity 1 29 0 714 75 47 9 chr17 33484320 33484426 -56020127 - HY1 scRNA scRNA -1 111 2 1957 144 29 0 chr17 33486059 33486357 -56018196 - AluSx SINE Alu 0 306 1 318 138 154 0 chr17 33486430 33486495 -56018058 + MER116 DNA Mariner 1 75 -5 3607 153 105 38 chr17 33486504 33486636 -56017917 - L1MB7 LINE L1 -2 6182 6060 2201 120 0 3 chr17 33486636 33486935 -56017618 + AluSx SINE Alu 1 298 -14 2174 125 0 3 chr17 33486944 33487241 -56017312 - AluSx SINE Alu -16 296 1 3607 153 105 38 chr17 33487241 33487871 -56016682 - L1MB7 LINE L1 -131 6053 5467 238 33 0 0 chr17 33487871 33487901 -56016652 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2044 108 7 0 chr17 33487901 33488187 -56016366 - AluSg SINE Alu -22 288 1 2256 89 7 0 chr17 33488187 33488490 -56016063 - AluSx SINE Alu -7 305 1 3607 153 105 38 chr17 33488490 33488548 -56016005 - L1MB7 LINE L1 -716 5468 5311 1059 154 0 21 chr17 33488551 33488739 -56015814 - AluJo SINE Alu -11 301 118 2529 121 41 0 chr17 33488751 33489164 -56015389 - L1PA13 LINE L1 0 6163 5734 1203 192 46 7 chr17 33489164 33489458 -56015095 - L1MB7 LINE L1 -872 5274 4966 395 215 127 51 chr17 33490775 33490933 -56013620 + MIR SINE MIR 24 193 -69 1913 150 26 7 chr17 33490943 33491249 -56013304 - AluJb SINE Alu 0 312 1 1693 121 85 18 chr17 33491249 33491531 -56013022 - AluSg SINE Alu -9 301 1 268 306 10 10 chr17 33492235 33492333 -56012220 + L1ME LINE L1 5729 5826 -295 190 232 72 130 chr17 33492742 33492821 -56011732 + MIR3 SINE MIR 30 99 -109 1425 169 35 24 chr17 33492821 33493111 -56011442 - AluJb SINE Alu -18 294 2 190 232 72 130 chr17 33493111 33493169 -56011384 + MIR3 SINE MIR 99 159 -49 1891 121 0 54 chr17 33493170 33493484 -56011069 - AluSx SINE Alu -15 297 1 2099 108 3 0 chr17 33493486 33493781 -56010772 - AluSx SINE Alu -16 296 1 195 42 0 0 chr17 33493781 33493805 -56010748 + (T)n Simple_repeat Simple_repeat 1 24 0 2051 97 7 10 chr17 33493818 33494116 -56010437 + AluSx SINE Alu 1 297 -15 1044 181 19 9 chr17 33494141 33494227 -56010326 - AluJo SINE Alu -91 221 137 2035 107 0 20 chr17 33494227 33494526 -56010027 - AluSp SINE Alu -19 294 2 1044 181 19 9 chr17 33494526 33494654 -56009899 - AluJo SINE Alu -175 137 5 228 184 61 0 chr17 33494661 33494710 -56009843 + MIR3 SINE MIR 156 207 -1 1361 134 117 40 chr17 33545521 33545820 -55958733 + MER33 DNA MER1_type 1 322 -2 1904 99 39 0 chr17 33546948 33547231 -55957322 - AluSx SINE Alu -18 294 1 2454 67 3 10 chr17 33547447 33547759 -55956794 - AluSq SINE Alu -3 310 1 22 56 0 0 chr17 33548883 33548919 -55955634 + GC_rich Low_complexity Low_complexity 1 36 0 25 95 0 0 chr17 33549053 33549127 -55955426 + GC_rich Low_complexity Low_complexity 1 74 0 299 216 0 52 chr17 33549296 33549393 -55955160 + G-rich Low_complexity Low_complexity 6 97 0 291 54 0 0 chr17 33549429 33549466 -55955087 + (CCG)n Simple_repeat Simple_repeat 1 37 0 35 63 0 0 chr17 33549484 33549547 -55955006 + GC_rich Low_complexity Low_complexity 1 63 0 309 205 13 73 chr17 33549714 33549865 -55954688 + G-rich Low_complexity Low_complexity 2 143 0 21 57 0 0 chr17 33550001 33550036 -55954517 + GC_rich Low_complexity Low_complexity 1 35 0 1601 151 0 75 chr17 33559577 33559896 -55944657 + AluJo SINE Alu 4 298 -14 244 237 21 43 chr17 33560789 33560882 -55943671 + MIR SINE MIR 23 113 -95 1951 112 49 0 chr17 33561346 33561632 -55942921 + AluSg SINE Alu 1 300 -10 889 138 23 0 chr17 33561644 33561774 -55942779 + FLAM_A SINE Alu 1 133 0 2295 94 0 0 chr17 33561777 33562085 -55942468 + AluSg SINE Alu 1 308 -2 1727 176 0 19 chr17 33562100 33562418 -55942135 + AluJb SINE Alu 1 312 0 2351 76 0 10 chr17 33563148 33563452 -55941101 + AluY SINE Alu 1 301 -10 858 140 100 0 chr17 33563461 33563611 -55940942 + L1MB5 LINE L1 5577 5741 -433 232 27 54 0 chr17 33563614 33563651 -55940902 + (ATG)n Simple_repeat Simple_repeat 3 41 0 4466 133 50 67 chr17 33563655 33564566 -55939987 + MER21A LTR ERV1 29 924 -7 2180 169 51 14 chr17 33564572 33564986 -55939567 + L1MB5 LINE L1 5738 6166 -8 243 360 101 55 chr17 33567119 33567594 -55936959 + L2 LINE L2 2247 2743 -571 373 282 193 3 chr17 33568158 33568360 -55936193 + L1MCa LINE L1 1445 1607 -4991 855 163 0 0 chr17 33568360 33568489 -55936064 + AluJo SINE Alu 1 129 -173 373 282 193 3 chr17 33568489 33568505 -55936048 + L1MCa LINE L1 1607 1871 -4727 541 290 74 57 chr17 33568863 33569226 -55935327 + L1MCa LINE L1 2227 2649 -3958 966 204 0 0 chr17 33569259 33569421 -55935132 + AluJo SINE Alu 138 299 -3 1727 169 0 38 chr17 33569540 33569853 -55934700 + AluJb SINE Alu 1 301 -11 416 321 103 18 chr17 33569875 33570040 -55934513 + L1MCa LINE L1 2937 3115 -3311 1274 222 46 82 chr17 33570060 33570316 -55934237 + MLT1A2 LTR MaLR 1 265 -109 2262 97 0 0 chr17 33570316 33570616 -55933937 - AluSg SINE Alu -9 301 2 1274 222 46 82 chr17 33570616 33570703 -55933850 + MLT1A2 LTR MaLR 265 331 -43 1931 139 0 3 chr17 33570703 33570998 -55933555 - AluSx SINE Alu -18 294 1 1274 222 46 82 chr17 33570998 33571041 -55933512 + MLT1A2 LTR MaLR 331 374 0 405 254 178 27 chr17 33571067 33571252 -55933301 - MIR SINE MIR -48 214 2 275 300 0 0 chr17 33571326 33571406 -55933147 + L2 LINE L2 3234 3313 0 2120 73 0 14 chr17 33571999 33572274 -55932279 - AluSc SINE Alu -3 306 36 457 303 113 10 chr17 33572393 33572588 -55931965 - MIR SINE MIR -13 249 35 203 259 19 0 chr17 33573571 33573625 -55930928 + CT-rich Low_complexity Low_complexity 3 57 0 1366 189 64 14 chr17 33573648 33573928 -55930625 - AluJo SINE Alu -18 294 1 2125 110 3 3 chr17 33574441 33574742 -55929811 + AluSq SINE Alu 1 301 -12 384 279 81 81 chr17 33575409 33575606 -55928947 + L2 LINE L2 3112 3308 -5 556 130 11 11 chr17 33576242 33576334 -55928219 - AluJo SINE Alu -4 308 217 841 136 49 49 chr17 33576335 33576382 -55928171 - AluJo SINE Alu -143 169 123 2153 131 3 0 chr17 33576382 33576688 -55927865 + AluSg1 SINE Alu 1 307 -2 841 136 49 49 chr17 33576688 33576802 -55927751 - AluJo SINE Alu -188 124 8 21 0 0 0 chr17 33576840 33576861 -55927692 + AT_rich Low_complexity Low_complexity 1 21 0 476 265 164 27 chr17 33577296 33577515 -55927038 + MIR SINE MIR 9 257 -5 1361 189 82 0 chr17 33577738 33578008 -55926545 - AluJo SINE Alu -20 292 1 424 219 103 84 chr17 33579886 33580041 -55924512 - MER5B DNA MER1_type 0 178 21 349 272 160 0 chr17 33580609 33580734 -55923819 - L2 LINE L2 -1 3271 3127 200 208 0 21 chr17 33581797 33581845 -55922708 + GA-rich Low_complexity Low_complexity 4 50 0 212 275 12 0 chr17 33581886 33581966 -55922587 + (CGG)n Simple_repeat Simple_repeat 2 82 0 23 0 0 0 chr17 33582307 33582330 -55922223 + AT_rich Low_complexity Low_complexity 1 23 0 925 134 0 0 chr17 33584085 33584219 -55920334 + AluSg SINE Alu 1 134 -176 2265 110 0 0 chr17 33584219 33584529 -55920024 + AluSg SINE Alu 1 310 0 2434 54 3 0 chr17 33585241 33585538 -55919015 - AluY SINE Alu -13 298 1 204 339 0 0 chr17 33585644 33585703 -55918850 + GA-rich Low_complexity Low_complexity 4 62 0 271 312 128 8 chr17 33585729 33585854 -55918699 - MIR3 SINE MIR -49 159 20 1212 147 88 0 chr17 33586034 33586238 -55918315 + AluJb SINE Alu 85 306 -6 593 269 16 58 chr17 33586244 33586486 -55918067 + MIR SINE MIR 30 261 -1 1825 141 3 39 chr17 33586816 33586985 -55917568 - AluJo SINE Alu -11 301 146 2218 90 10 0 chr17 33586985 33587284 -55917269 - AluSg SINE Alu -8 302 1 1825 141 3 39 chr17 33587284 33587426 -55917127 - AluJo SINE Alu -166 146 1 312 53 0 0 chr17 33587993 33588031 -55916522 - U2 snRNA snRNA -150 38 1 501 333 94 27 chr17 33588289 33588692 -55915861 + L2 LINE L2 2826 3255 -17 852 213 0 0 chr17 33589088 33589243 -55915310 - AluJb SINE Alu -24 288 134 1841 166 10 19 chr17 33589934 33590242 -55914311 + AluJo SINE Alu 1 305 -7 2337 95 0 0 chr17 33590263 33590559 -55913994 - AluSg SINE Alu -14 296 1 309 109 0 0 chr17 33590857 33590903 -55913650 + (TG)n Simple_repeat Simple_repeat 2 47 0 1697 209 61 29 chr17 33590929 33591418 -55913135 + MLT1D LTR MaLR 1 505 0 319 219 137 68 chr17 33592577 33592782 -55911771 + MIR SINE MIR 35 253 -9 1960 156 0 0 chr17 33592940 33593228 -55911325 + AluJo SINE Alu 1 288 -24 22 0 0 0 chr17 33593228 33593250 -55911303 + AT_rich Low_complexity Low_complexity 1 22 0 488 306 76 52 chr17 33593391 33593773 -55910780 + MLT1K LTR MaLR 39 429 -159 2578 47 10 0 chr17 33594867 33595166 -55909387 + AluY SINE Alu 1 302 -9 347 313 137 18 chr17 33595601 33596191 -55908362 + L2 LINE L2 2216 2953 -361 27 33 0 50 chr17 33596563 33596603 -55907950 + AT_rich Low_complexity Low_complexity 1 39 -18 1764 171 0 20 chr17 33596603 33596895 -55907658 - AluJo SINE Alu -26 286 1 27 33 0 50 chr17 33596895 33596914 -55907639 + AT_rich Low_complexity Low_complexity 39 57 0 2248 84 0 18 chr17 33597887 33598199 -55906354 + AluSg SINE Alu 1 307 0 2399 97 0 6 chr17 33598445 33598756 -55905797 - AluSx SINE Alu -3 309 1 1307 170 23 5 chr17 33599682 33599900 -55904653 + MER58A DNA MER1_type 1 222 -2 606 229 18 12 chr17 33600425 33600595 -55903958 + MER104 DNA Tc2 3 173 -7 1736 159 0 60 chr17 33600704 33601019 -55903534 - AluJo SINE Alu -16 296 1 3510 80 2 14 chr17 33601061 33601548 -55903005 + L1PA10 LINE L1 5688 6168 0 737 145 0 0 chr17 33601579 33601696 -55902857 + FLAM_C SINE Alu 1 117 -16 423 0 0 0 chr17 33601696 33601743 -55902810 + (CA)n Simple_repeat Simple_repeat 2 48 0 1639 194 167 29 chr17 33601803 33602247 -55902306 - MLT1D LTR MaLR 0 505 1 4695 168 40 18 chr17 33602381 33602481 -55902072 + L1MB8 LINE L1 5103 5199 -979 1953 120 63 0 chr17 33602481 33602765 -55901788 + AluSx SINE Alu 1 302 -10 4695 168 40 18 chr17 33602765 33603061 -55901492 + L1MB8 LINE L1 5199 5487 -691 2412 93 7 0 chr17 33603061 33603362 -55901191 + AluSx SINE Alu 1 303 -9 4695 168 40 18 chr17 33603362 33604020 -55900533 + L1MB8 LINE L1 5487 6172 -6 202 272 37 25 chr17 33604090 33604171 -55900382 + MIR SINE MIR 181 262 0 284 269 172 0 chr17 33605215 33605349 -55899204 + L3 LINE CR1 1419 1575 -2 2589 62 0 0 chr17 33605362 33605668 -55898885 + AluY SINE Alu 1 306 -5 2293 75 7 0 chr17 33605712 33606051 -55898502 + AluY SINE Alu 1 341 0 2308 99 0 0 chr17 33606218 33606510 -55898043 - AluSx SINE Alu -20 292 1 1857 137 30 47 chr17 33606519 33606818 -55897735 - AluJb SINE Alu -18 294 1 538 291 80 8 chr17 33607571 33607808 -55896745 + MIR SINE MIR 9 262 0 1641 160 31 27 chr17 33609327 33609621 -55894932 - AluJo SINE Alu -12 300 6 324 271 84 39 chr17 33609707 33609862 -55894691 - MIR SINE MIR -4 258 97 410 277 123 0 chr17 33609950 33610080 -55894473 - L3 LINE CR1 -3 1574 1429 2014 133 0 10 chr17 33610090 33610383 -55894170 + AluSx SINE Alu 7 296 -16 1681 147 13 36 chr17 33610556 33610862 -55893691 + AluJo SINE Alu 1 299 -13 2325 112 3 0 chr17 33611125 33611430 -55893123 - AluSx SINE Alu -6 306 1 22 0 0 0 chr17 33611433 33611455 -55893098 + AT_rich Low_complexity Low_complexity 1 22 0 1762 168 3 10 chr17 33611511 33611808 -55892745 - AluJo SINE Alu -13 299 5 244 249 41 23 chr17 33612126 33612241 -55892312 + MIR SINE MIR 69 180 -61 609 64 0 0 chr17 33612275 33612353 -55892200 - MLT2A2 LTR ERVL -375 78 1 2048 120 0 0 chr17 33612517 33612792 -55891761 - AluSx SINE Alu -13 299 25 1356 186 115 4 chr17 33613130 33613399 -55891154 + AluJo SINE Alu 1 299 -13 267 31 0 0 chr17 33613972 33614004 -55890549 + (CA)n Simple_repeat Simple_repeat 1 32 0 374 224 138 17 chr17 33614166 33614282 -55890271 + L2 LINE L2 3184 3313 0 1835 167 10 3 chr17 33614490 33614790 -55889763 - AluJb SINE Alu -10 302 1 522 31 0 0 chr17 33614817 33614881 -55889672 + (TCCA)n Simple_repeat Simple_repeat 2 65 0 263 354 71 0 chr17 33615017 33615130 -55889423 - L2 LINE L2 -27 3245 3125 801 179 0 8 chr17 33615358 33615524 -55889029 + FLAM_C SINE Alu 1 165 0 264 345 95 0 chr17 33615753 33615901 -55888652 - L2 LINE L2 -229 3043 2882 236 309 108 35 chr17 33616001 33616315 -55888238 + L2 LINE L2 1980 2316 -998 32 26 0 0 chr17 33616857 33616896 -55887657 + AT_rich Low_complexity Low_complexity 1 39 0 740 313 84 31 chr17 33617084 33617570 -55886983 + L1ME LINE L1 5265 5776 -345 548 275 194 22 chr17 33618184 33618555 -55885998 + L2 LINE L2 2872 3306 -7 884 144 8 0 chr17 33618956 33619088 -55885465 - FLAM_C SINE Alu 0 133 1 2156 84 38 3 chr17 33619526 33619813 -55884740 - AluSq SINE Alu -16 297 1 1133 152 19 43 chr17 33619895 33620106 -55884447 - AluJb SINE Alu -5 307 102 354 250 13 0 chr17 33620106 33620182 -55884371 - MER58B DNA MER1_type -6 335 259 603 117 32 0 chr17 33620202 33620296 -55884257 + MER58 DNA MER1_type 121 217 -2203 664 159 22 29 chr17 33620336 33620474 -55884079 - MER58 DNA MER1_type -124 217 81 729 301 26 4 chr17 33621220 33621449 -55883104 + MIR SINE MIR 29 262 0 2196 145 5 75 chr17 33621686 33622101 -55882452 + MER57A LTR ERV1 3 388 -15 2354 85 3 3 chr17 33622380 33622675 -55881878 + AluSg SINE Alu 2 296 -14 450 0 0 0 chr17 33622933 33622983 -55881570 + (TA)n Simple_repeat Simple_repeat 2 51 0 1332 125 23 28 chr17 33623709 33623925 -55880628 - AluSq SINE Alu -15 298 84 434 221 83 69 chr17 33624053 33624207 -55880346 - L1ME LINE L1 -311 5810 5651 1859 136 51 17 chr17 33624207 33624502 -55880051 - AluJb SINE Alu -5 307 3 434 221 83 69 chr17 33624502 33624551 -55880002 - L1ME LINE L1 -470 5651 5604 249 287 96 48 chr17 33624680 33624889 -55879664 - L1ME LINE L1 -535 5586 5368 2255 116 0 22 chr17 33624936 33625255 -55879298 - AluSx SINE Alu 0 312 1 288 328 32 24 chr17 33626310 33626435 -55878118 - L2 LINE L2 -49 3223 3098 2154 121 0 3 chr17 33626746 33627043 -55877510 - AluSx SINE Alu -16 296 1 2069 110 14 14 chr17 33627476 33627766 -55876787 - AluSx SINE Alu -22 290 1 282 315 70 29 chr17 33628045 33628286 -55876267 - L2 LINE L2 -218 3054 2804 2707 33 3 0 chr17 33628579 33628884 -55875669 - AluY SINE Alu -5 306 1 377 294 0 34 chr17 33629238 33629357 -55875196 + L2 LINE L2 3199 3313 0 342 335 92 5 chr17 33629412 33629630 -55874923 - MIR SINE MIR -6 256 20 180 0 0 0 chr17 33630223 33630243 -55874310 + (A)n Simple_repeat Simple_repeat 1 20 0 387 222 102 28 chr17 33630597 33630705 -55873848 + MER94 DNA DNA 16 131 -3 224 368 40 26 chr17 33630952 33631104 -55873449 + L2 LINE L2 3119 3272 0 263 347 125 8 chr17 33631941 33632189 -55872364 + L3b LINE CR1 1281 1557 -26 2282 64 43 0 chr17 33632411 33632692 -55871861 - AluY SINE Alu -18 293 1 756 276 202 14 chr17 33634331 33635122 -55869431 + L2 LINE L2 2339 3297 -16 552 273 70 55 chr17 33635416 33635557 -55868996 - HAL1b LINE L1 -714 1793 1656 1861 169 0 16 chr17 33635557 33635865 -55868688 - AluJo SINE Alu -9 303 1 552 273 70 55 chr17 33635865 33635887 -55868666 - HAL1b LINE L1 -851 1656 1636 2482 62 0 3 chr17 33635887 33636192 -55868361 - AluY SINE Alu -7 304 1 552 273 70 55 chr17 33636192 33636323 -55868230 - HAL1b LINE L1 -871 1636 418 566 269 19 53 chr17 33636846 33637054 -55867499 + MIR SINE MIR 7 207 -55 195 42 0 0 chr17 33638692 33638716 -55865837 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 1521 152 0 86 chr17 33638716 33639006 -55865547 - AluJo SINE Alu -32 280 16 2017 137 0 3 chr17 33639009 33639309 -55865244 + AluSx SINE Alu 1 299 -13 925 141 0 47 chr17 33639309 33639473 -55865080 - AluJo SINE Alu -164 148 1 2565 62 0 3 chr17 33639775 33640080 -55864473 - AluY SINE Alu -7 304 1 200 336 35 35 chr17 33640964 33641080 -55863473 + L2 LINE L2 2794 2909 -405 1944 150 10 19 chr17 33641096 33641410 -55863143 - AluJb SINE Alu -1 311 1 2163 233 65 23 chr17 33641540 33642107 -55862446 - L1ME1 LINE L1 -5 6230 5640 4333 228 48 87 chr17 33642208 33642450 -55862103 - L1ME1 LINE L1 -2071 4144 3894 2386 77 0 3 chr17 33642450 33642748 -55861805 - AluSg SINE Alu -11 299 3 4333 228 48 87 chr17 33642748 33643621 -55860932 - L1ME1 LINE L1 -2321 3894 2988 1620 168 0 40 chr17 33643621 33643783 -55860770 - AluJb SINE Alu -20 292 125 330 26 0 0 chr17 33643783 33643822 -55860731 + (TG)n Simple_repeat Simple_repeat 2 40 0 2010 112 3 37 chr17 33643822 33644117 -55860436 - AluSx SINE Alu -27 285 1 1620 168 0 40 chr17 33644117 33644257 -55860296 - AluJb SINE Alu -185 127 1 4333 228 48 87 chr17 33644257 33645769 -55858784 - L1ME1 LINE L1 -3227 2988 1014 991 197 5 0 chr17 33645769 33645962 -55858591 - AluJb SINE Alu 0 312 119 655 111 0 0 chr17 33646055 33646145 -55858408 - AluJ/FLAM SINE Alu -222 90 1 486 105 38 105 chr17 33646462 33646543 -55858010 - L1MB2 LINE L1 -36 6135 6061 1496 134 92 42 chr17 33646543 33646826 -55857727 - AluJo SINE Alu -15 297 1 486 105 38 105 chr17 33646826 33646849 -55857704 - L1MB2 LINE L1 -110 6061 6038 301 344 22 0 chr17 33646898 33646988 -55857565 - MIR SINE MIR -81 127 36 2294 93 0 26 chr17 33647489 33647801 -55856752 + AluSx SINE Alu 1 304 -8 652 221 132 10 chr17 33648415 33648619 -55855934 - L3 LINE CR1 -696 881 653 378 350 113 39 chr17 33648622 33648931 -55855622 - L3 LINE CR1 -1200 377 46 363 197 0 13 chr17 33649155 33649231 -55855322 - MLT1K LTR MaLR -3 585 511 2423 93 0 0 chr17 33649271 33649572 -55854981 + AluSq SINE Alu 1 301 -12 1888 149 30 3 chr17 33650710 33651011 -55853542 + AluSx SINE Alu 1 309 -3 230 220 0 0 chr17 33651074 33651124 -55853429 - L1MB2 LINE L1 -30 6141 6092 186 363 93 63 chr17 33652215 33652645 -55851908 + L2 LINE L2 2824 3266 -6 387 272 136 18 chr17 33653810 33653979 -55850574 - MER5A DNA MER1_type 0 189 1 346 267 8 25 chr17 33653993 33654113 -55850440 - L1MB2 LINE L1 -1985 5823 5706 1091 172 34 14 chr17 33654258 33654498 -55850055 - L1MC3 LINE L1 -111 6055 5811 688 204 164 62 chr17 33654609 33654884 -55849669 + L1MC3 LINE L1 6040 6342 -1443 391 283 21 28 chr17 33655453 33655598 -55848955 - HAL1b LINE L1 -821 527 384 2123 121 0 3 chr17 33655697 33655995 -55848558 + AluSg SINE Alu 1 297 -13 408 207 11 0 chr17 33656257 33656344 -55848209 - HsTC2 DNA Tc2 0 1898 1811 1729 113 18 101 chr17 33657178 33657515 -55847038 + L1MA5 LINE L1 5990 6298 -2 782 288 56 10 chr17 33657706 33657994 -55846559 - L2 LINE L2 -8 3305 3005 282 264 66 33 chr17 33659465 33659586 -55844967 + L1MC4a LINE L1 5862 5986 -1822 2198 94 14 3 chr17 33659651 33659938 -55844615 + AluSx SINE Alu 21 310 -2 277 309 82 27 chr17 33659949 33660059 -55844494 - L1MC4a LINE L1 -1877 5931 5816 454 194 9 37 chr17 33660070 33660133 -55844420 - MER103 DNA DNA -57 109 49 2037 156 0 0 chr17 33660133 33660435 -55844118 + AluSx SINE Alu 1 302 -10 454 194 9 37 chr17 33660435 33660479 -55844074 - MER103 DNA DNA -117 49 5 1206 132 16 11 chr17 33660629 33660819 -55843734 - Tigger1 DNA MER2_type 0 2418 2228 14657 111 9 58 chr17 33660943 33661688 -55842865 - Tigger1 DNA MER2_type -200 2218 1438 2387 105 0 0 chr17 33661688 33661994 -55842559 - AluSx SINE Alu -6 306 1 14657 111 9 58 chr17 33661994 33662982 -55841571 - Tigger1 DNA MER2_type -980 1438 624 1516 173 88 34 chr17 33662982 33663277 -55841276 - AluJo SINE Alu -1 311 1 14657 111 9 58 chr17 33663277 33663873 -55840680 - Tigger1 DNA MER2_type -1794 624 1 2453 210 55 9 chr17 33664137 33664718 -55839835 - L1MEc LINE L1 -5336 1060 453 21 36 0 0 chr17 33665166 33665194 -55839359 + AT_rich Low_complexity Low_complexity 1 28 0 2515 66 0 0 chr17 33665563 33665866 -55838687 - AluY SINE Alu -8 303 1 841 186 0 0 chr17 33667355 33667484 -55837069 + FLAM_A SINE Alu 1 129 -4 7937 218 44 33 chr17 33667563 33667840 -55836713 + L1ME1 LINE L1 3119 3391 -2775 1864 113 3 75 chr17 33667840 33668160 -55836393 + AluSx SINE Alu 1 297 -15 7937 218 44 33 chr17 33668160 33668919 -55835634 + L1ME1 LINE L1 3391 4140 -2026 2414 86 0 7 chr17 33668919 33669222 -55835331 + AluSx SINE Alu 1 301 -11 7937 218 44 33 chr17 33669222 33671158 -55833395 + L1ME1 LINE L1 4140 6116 -50 26 74 0 0 chr17 33671942 33671996 -55832557 + AT_rich Low_complexity Low_complexity 1 54 0 423 294 77 42 chr17 33672547 33672690 -55831863 + MIR SINE MIR 42 189 -73 2011 144 3 0 chr17 33673598 33673896 -55830657 + AluSq SINE Alu 1 299 -14 2235 116 0 0 chr17 33675061 33675354 -55829199 - AluSx SINE Alu -14 298 6 201 233 23 0 chr17 33675923 33675966 -55828587 + MER5B DNA MER1_type 1 44 -134 * 310 181 28 14 chr17 33675964 33676036 -55828517 - MER5B DNA MER1_type -80 98 26 21 36 0 0 chr17 33676139 33676167 -55828386 + AT_rich Low_complexity Low_complexity 1 28 0 2250 240 59 38 chr17 33676326 33677133 -55827420 - L1MDa LINE L1 -5452 1088 34 1804 139 76 38 chr17 33677335 33677679 -55826874 - MER46B DNA MER2_type -4 232 1 1756 153 81 39 chr17 33678120 33678479 -55826074 + MLT1A2 LTR MaLR 1 374 0 607 286 162 30 chr17 33678766 33679105 -55825448 - L2 LINE L2 -10 3303 2920 211 267 19 105 chr17 33679194 33679299 -55825254 - MIR SINE MIR -20 242 147 1434 174 143 6 chr17 33680099 33680420 -55824133 - MLT1A1 LTR MaLR 0 365 1 281 188 0 0 chr17 33680575 33680623 -55823930 - MER5B DNA MER1_type -1 177 130 966 135 0 0 chr17 33680643 33680776 -55823777 - FLAM_C SINE Alu 0 133 1 707 213 14 0 chr17 33680778 33680919 -55823634 - MER5B DNA MER1_type -35 143 1 2408 98 0 9 chr17 33681200 33681515 -55823038 - AluSq SINE Alu -1 312 1 1724 153 69 0 chr17 33681981 33682255 -55822298 - AluJb SINE Alu -19 293 1 268 301 14 0 chr17 33682382 33682455 -55822098 + MIR SINE MIR 61 134 -74 284 317 89 8 chr17 33682539 33682662 -55821891 + L2 LINE L2 3138 3270 -2 6719 177 35 5 chr17 33685114 33685877 -55818676 + L1MC3 LINE L1 5441 6258 -1527 2241 98 14 10 chr17 33685877 33686173 -55818380 + AluSg1 SINE Alu 1 297 -12 6719 177 35 5 chr17 33686173 33686662 -55817891 + L1MC3 LINE L1 6258 6731 -1054 815 114 0 0 chr17 33686665 33686770 -55817783 - FLAM_C SINE Alu -20 123 19 430 147 62 78 chr17 33686780 33686875 -55817678 + L1MB8 LINE L1 6051 6145 -33 2457 136 23 43 chr17 33686875 33687004 -55817549 - MLT1B LTR MaLR 0 390 260 2209 106 0 3 chr17 33687004 33687297 -55817256 - AluY SINE Alu -19 292 1 2457 136 23 43 chr17 33687297 33687565 -55816988 - MLT1B LTR MaLR -130 260 1 430 147 62 78 chr17 33687565 33687598 -55816955 + L1MB8 LINE L1 6145 6177 -1 1627 155 13 43 chr17 33687781 33688084 -55816469 + AluJo SINE Alu 1 294 -18 541 257 228 4 chr17 33688092 33688364 -55816189 + L1MC4 LINE L1 7708 8040 -2 520 269 106 29 chr17 33688681 33688889 -55815664 + Charlie8 DNA MER1_type 6 229 -2188 315 0 0 0 chr17 33688992 33689027 -55815526 + (CA)n Simple_repeat Simple_repeat 2 36 0 293 281 109 0 chr17 33689214 33689342 -55815211 + L1M4 LINE L1 4753 4894 -1252 634 304 101 19 chr17 33689362 33689780 -55814773 + L1M4 LINE L1 2825 3276 -2870 526 209 7 65 chr17 33689959 33690112 -55814441 - L1ME3 LINE L1 -2 6160 6017 884 268 92 43 chr17 33690118 33690488 -55814065 + L2 LINE L2 2919 3306 -7 1989 102 33 11 chr17 33691816 33692090 -55812463 + AluSg SINE Alu 1 280 -30 203 239 76 33 chr17 33692332 33692424 -55812129 - MIR3 SINE MIR -3 205 110 207 318 81 28 chr17 33692500 33692711 -55811842 + L2 LINE L2 2172 2393 -921 311 267 105 0 chr17 33692762 33692867 -55811686 - L1MC4 LINE L1 0 8042 7927 422 294 131 19 chr17 33692955 33693346 -55811207 - LTR16C LTR ERVL -13 478 2 1913 150 13 7 chr17 33693786 33694092 -55810461 + AluSx SINE Alu 1 308 -4 601 181 4 6 chr17 33695473 33695633 -55808920 + L1M4 LINE L1 5178 5339 -829 423 0 0 0 chr17 33695761 33695808 -55808745 + (TG)n Simple_repeat Simple_repeat 2 48 0 714 203 43 7 chr17 33695956 33696094 -55808459 - FRAM SINE Alu -35 141 1 3800 12 0 0 chr17 33696722 33697154 -55807399 - L1PA3 LINE L1 0 6155 5724 36 40 0 0 chr17 33697286 33697336 -55807217 + AT_rich Low_complexity Low_complexity 1 50 0 33497 43 8 0 chr17 33697338 33702529 -55802024 - L1PA5 LINE L1 -5 6149 922 234 247 129 0 chr17 33702529 33702614 -55801939 - MER103 DNA DNA -69 97 2 547 133 219 0 chr17 33702744 33702849 -55801704 + FRAM SINE Alu 25 152 -24 2225 120 7 0 chr17 33704329 33704637 -55799916 + AluSx SINE Alu 1 310 -2 365 204 11 43 chr17 33704697 33704790 -55799763 + MER21B LTR ERV1 1 90 -773 1471 183 16 0 chr17 33704845 33705097 -55799456 + MER21B LTR ERV1 83 338 -525 6196 226 67 35 chr17 33705128 33705580 -55798973 - L1MEc LINE L1 -4096 2300 1864 2135 180 36 21 chr17 33705580 33705957 -55798596 - L1MB3 LINE L1 -13 6170 5783 2394 109 0 0 chr17 33705957 33706269 -55798284 - AluSx SINE Alu 0 312 1 2135 180 36 21 chr17 33706269 33706369 -55798184 - L1MB3 LINE L1 -400 5783 5686 6196 226 67 35 chr17 33706369 33708041 -55796512 - L1MEc LINE L1 -4532 1864 107 2262 110 0 7 chr17 33708072 33708373 -55796180 - AluSc SINE Alu -10 299 1 375 280 127 38 chr17 33708429 33708743 -55795810 - L1MB3 LINE L1 -2051 5757 5416 36 23 0 0 chr17 33708902 33708945 -55795608 + AT_rich Low_complexity Low_complexity 1 43 0 2603 49 0 3 chr17 33709257 33709564 -55794989 + AluY SINE Alu 1 306 -5 2167 135 3 0 chr17 33709722 33710026 -55794527 + AluSq SINE Alu 1 305 -8 2138 119 23 0 chr17 33711071 33711373 -55793180 - AluSx SINE Alu -1 311 3 1478 242 130 29 chr17 33711620 33712421 -55792132 - L2 LINE L2 0 3313 2427 994 198 64 0 chr17 33713720 33713922 -55790631 + MER58C DNA MER1_type 1 215 0 218 261 0 0 chr17 33713951 33713997 -55790556 + (CGTG)n Simple_repeat Simple_repeat 2 47 0 489 273 8 53 chr17 33714035 33714167 -55790386 + L2 LINE L2 3147 3272 0 536 239 33 44 chr17 33714977 33715157 -55789396 + MER5B DNA MER1_type 1 178 0 643 280 49 109 chr17 33717611 33717768 -55786785 - HAL1 LINE L1 -29 2478 2313 1944 165 0 10 chr17 33717768 33718065 -55786488 + AluJb SINE Alu 1 294 -18 643 280 49 109 chr17 33718065 33718439 -55786114 - HAL1 LINE L1 -194 2313 1979 1080 202 48 40 chr17 33718712 33718788 -55785765 + MIR SINE MIR 8 82 -180 2164 98 7 7 chr17 33718788 33719084 -55785469 + AluSg SINE Alu 1 296 -14 1080 202 48 40 chr17 33719084 33719259 -55785294 + MIR SINE MIR 82 261 -1 2501 82 0 0 chr17 33719307 33719613 -55784940 - AluY SINE Alu -4 307 2 1320 240 41 36 chr17 33721194 33721848 -55782705 + L2 LINE L2 2670 3313 0 1090 299 126 42 chr17 33721852 33722832 -55781721 - HAL1 LINE L1 -1379 1128 67 189 0 0 0 chr17 33723099 33723120 -55781433 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 395 210 12 0 chr17 33725012 33725093 -55779460 - MER103 DNA DNA -13 153 72 2505 72 0 3 chr17 33725093 33725399 -55779154 - AluY SINE Alu -6 305 1 1181 248 34 73 chr17 33725492 33726056 -55778497 + MER34 LTR ERV1 1 542 0 1824 170 3 13 chr17 33726282 33726593 -55777960 - AluSx SINE Alu -4 308 1 786 194 17 0 chr17 33726624 33726799 -55777754 + L1MC4 LINE L1 7743 7920 -122 2613 213 48 25 chr17 33726867 33727803 -55776750 + LTR28 LTR ERV1 3 1020 0 601 120 34 17 chr17 33727805 33727922 -55776631 + L1MC4 LINE L1 7923 8041 -1 984 154 20 20 chr17 33728210 33728405 -55776148 - MER96B DNA MER1_type? -184 233 39 343 356 122 5 chr17 33728484 33728672 -55775881 - MIR SINE MIR -19 243 34 2064 130 0 0 chr17 33728876 33729161 -55775392 - AluSx SINE Alu -5 307 23 920 254 25 8 chr17 33729495 33729731 -55774822 - AluSg/x SINE Alu 0 309 70 347 281 136 51 chr17 33729856 33730091 -55774462 + L1M4 LINE L1 3601 3855 -2291 2208 102 0 49 chr17 33730091 33730415 -55774138 + AluSg SINE Alu 1 308 -2 198 0 0 0 chr17 33730669 33730691 -55773862 + (T)n Simple_repeat Simple_repeat 1 22 0 1366 231 65 5 chr17 33731362 33731734 -55772819 + MLT1G LTR MaLR 197 590 0 232 222 100 11 chr17 33731738 33731828 -55772725 + MLT1G-int LTR MaLR 4 101 -1270 410 308 16 39 chr17 33731870 33732110 -55772443 + MLT1G-int LTR MaLR 292 522 -851 1591 162 20 44 chr17 33732920 33733216 -55771337 - AluJo SINE Alu -23 289 1 1709 235 32 44 chr17 33733280 33733515 -55771038 + MLT1G LTR MaLR 11 247 -343 1760 126 84 11 chr17 33733515 33733801 -55770752 + AluSx SINE Alu 1 307 -5 1709 235 32 44 chr17 33733801 33734038 -55770515 + MLT1G LTR MaLR 247 479 -111 1998 113 0 36 chr17 33734038 33734340 -55770213 - AluSq SINE Alu -22 291 1 1709 235 32 44 chr17 33734340 33734364 -55770189 + MLT1G LTR MaLR 479 502 -88 25 0 0 0 chr17 33734600 33734625 -55769928 + AT_rich Low_complexity Low_complexity 1 25 0 2156 121 23 3 chr17 33734699 33735005 -55769548 - AluSx SINE Alu 0 312 1 514 220 40 0 chr17 33735216 33735316 -55769237 + FLAM_A SINE Alu 1 104 -38 244 306 105 16 chr17 33735803 33735927 -55768626 + MIR3 SINE MIR 64 198 -10 194 250 0 0 chr17 33736081 33736121 -55768432 - MIR SINE MIR -30 232 193 382 269 137 52 chr17 33737215 33737486 -55767067 - L1 LINE L1 -763 5383 5090 262 263 132 16 chr17 33737518 33737708 -55766845 - L1ME LINE L1 -240 5881 5670 2499 64 0 0 chr17 33738416 33738711 -55765842 - AluY SINE Alu -16 295 1 227 111 0 19 chr17 33739180 33739234 -55765319 - LTR66 LTR ERVL -169 441 389 385 335 26 7 chr17 33739697 33739849 -55764704 + L2 LINE L2 2916 3070 -243 40605 33 24 1 chr17 33739859 33745874 -55758679 - L1PA2 LINE L1 0 6155 1 338 303 185 11 chr17 33745918 33746096 -55758457 + L2 LINE L2 3103 3311 -2 984 206 63 35 chr17 33747758 33748131 -55756422 + MLT1D LTR MaLR 80 505 0 1826 150 4 7 chr17 33748197 33748471 -55756082 + AluJb SINE Alu 13 285 -27 573 147 52 35 chr17 33748471 33748566 -55755987 + AluJb SINE Alu 187 286 -26 378 0 0 0 chr17 33748566 33748608 -55755945 + (CA)n Simple_repeat Simple_repeat 2 43 0 573 147 52 35 chr17 33748608 33748628 -55755925 + AluJb SINE Alu 286 304 -8 285 190 76 13 chr17 33748652 33748731 -55755822 - MIR SINE MIR -44 218 135 1189 134 0 70 chr17 33748743 33748797 -55755756 - AluJo SINE Alu -125 187 131 2507 63 0 3 chr17 33748797 33749098 -55755455 - AluY SINE Alu -11 300 1 1189 134 0 70 chr17 33749098 33749244 -55755309 - AluJo SINE Alu -181 131 1 402 100 0 0 chr17 33750522 33750582 -55753971 + (TG)n Simple_repeat Simple_repeat 2 61 0 474 184 125 0 chr17 33750589 33750725 -55753828 + L1ME4a LINE L1 5963 6115 -6 321 222 85 46 chr17 33751215 33751317 -55753236 - L1ME4a LINE L1 -206 5915 5804 2204 116 0 23 chr17 33751317 33751627 -55752926 - AluSx SINE Alu -9 303 1 321 222 85 46 chr17 33751627 33751677 -55752876 - L1ME4a LINE L1 -317 5804 5757 * 972 188 16 78 chr17 33751670 33751781 -55752772 - L1MA4A LINE L1 -7 6296 6180 1983 122 30 3 chr17 33751781 33752076 -55752477 - AluSx SINE Alu -9 303 1 972 188 16 78 chr17 33752076 33752106 -55752447 - L1MA4A LINE L1 -123 6180 6150 2287 122 106 5 chr17 33752106 33752492 -55752061 + MSTB LTR MaLR 1 425 -1 972 188 16 78 chr17 33752492 33752596 -55751957 - L1MA4A LINE L1 -153 6150 6070 1543 187 18 11 chr17 33752596 33752880 -55751673 + AluJo SINE Alu 16 301 -11 972 188 16 78 chr17 33752880 33752940 -55751613 - L1MA4A LINE L1 -233 6070 6008 2380 92 3 0 chr17 33753003 33753307 -55751246 - AluSx SINE Alu -7 305 1 406 238 140 30 chr17 33753353 33753517 -55751036 - L1ME4a LINE L1 -462 5659 5478 223 415 0 0 chr17 33755926 33756032 -55748521 + L2 LINE L2 1896 2001 -1313 2796 10 0 0 chr17 33756035 33756336 -55748217 + AluYb8 SINE Alu 15 315 -3 682 275 98 68 chr17 33756359 33756686 -55747867 + L2 LINE L2 2276 2623 -691 2169 146 3 20 chr17 33756686 33757029 -55747524 - MER1B DNA MER1_type 0 337 1 682 275 98 68 chr17 33757029 33757170 -55747383 + L2 LINE L2 2623 2758 -556 334 221 221 0 chr17 33757176 33757289 -55747264 + L1ME LINE L1 16 153 -5966 606 294 10 5 chr17 33757292 33757486 -55747067 + L1ME2 LINE L1 5462 5656 -506 1104 212 16 20 chr17 33757487 33757732 -55746821 + Charlie1 DNA MER1_type 2 245 -2516 405 303 132 41 chr17 33757767 33758074 -55746479 + L1ME2 LINE L1 5646 5915 -249 208 239 85 136 chr17 33758630 33758806 -55745747 + L2 LINE L2 3029 3195 -77 643 319 25 34 chr17 33759573 33759808 -55744745 + MIR SINE MIR 9 241 -21 657 163 14 7 chr17 33759857 33759998 -55744555 + CT-rich Low_complexity Low_complexity 3 144 0 2066 111 13 19 chr17 33760559 33760866 -55743687 - AluSg SINE Alu -5 305 1 404 229 68 82 chr17 33761165 33761444 -55743109 + L1MC5 LINE L1 7653 7927 -34 995 316 92 50 chr17 33761448 33761741 -55742812 + L1ME LINE L1 2659 2939 -3190 2034 119 52 24 chr17 33761741 33762069 -55742484 - MER1B DNA MER1_type 0 337 1 995 316 92 50 chr17 33762069 33762263 -55742290 + L1ME LINE L1 2939 3124 -3005 2479 107 0 0 chr17 33762263 33762573 -55741980 + AluSx SINE Alu 1 310 -2 995 316 92 50 chr17 33762573 33763035 -55741518 + L1ME LINE L1 3124 3648 -2481 1783 177 0 13 chr17 33763163 33763468 -55741085 - AluJo SINE Alu -11 301 1 740 180 0 8 chr17 33765055 33765183 -55739370 - FLAM_A SINE Alu -6 127 1 498 281 73 16 chr17 33766006 33766198 -55738355 + L1ME LINE L1 5460 5662 -442 189 340 0 0 chr17 33766233 33766286 -55738267 - MIR SINE MIR 0 262 210 41 21 0 0 chr17 33766496 33766544 -55738009 + AT_rich Low_complexity Low_complexity 1 48 0 702 203 30 0 chr17 33766696 33766829 -55737724 - MER8 DNA MER2_type -2 237 101 2325 80 0 17 chr17 33766866 33767165 -55737388 - AluY SINE Alu -17 294 1 2387 90 33 36 chr17 33767308 33767673 -55736880 + THE1B LTR MaLR 1 364 0 2041 142 3 3 chr17 33767721 33768010 -55736543 - AluSx SINE Alu -23 289 1 371 362 77 10 chr17 33768067 33768274 -55736279 + L1ME LINE L1 4729 4949 -1197 2369 85 0 0 chr17 33768305 33768598 -55735955 - AluY SINE Alu -18 293 1 287 316 95 11 chr17 33768763 33769026 -55735527 + L1ME LINE L1 5266 5550 -612 2805 177 25 35 chr17 33769171 33769735 -55734818 + MER68 LTR ERV1 5 562 0 502 227 24 28 chr17 33769834 33770037 -55734516 + HAL1b LINE L1 1189 1340 -8 613 189 47 0 chr17 33770771 33770898 -55733655 + MER94 DNA DNA 1 133 -1 567 292 98 30 chr17 33771293 33772670 -55731883 + L1ME LINE L1 4178 5654 -508 2267 86 0 0 chr17 33772967 33773247 -55731306 + AluSg SINE Alu 1 280 -30 412 278 85 81 chr17 33773255 33773514 -55731039 + HAL1b LINE L1 346 605 -743 21 0 0 0 chr17 33773566 33773587 -55730966 + AT_rich Low_complexity Low_complexity 1 21 0 531 339 46 14 chr17 33773939 33774370 -55730183 + L1M4 LINE L1 3908 4352 -1794 764 224 90 59 chr17 33774373 33774639 -55729914 - MLT1E LTR MaLR -317 276 3 712 276 95 15 chr17 33774751 33775161 -55729392 - L1M4 LINE L1 -1094 5052 4610 1779 139 44 4 chr17 33775251 33775524 -55729029 - AluSx SINE Alu -26 286 3 3485 82 6 22 chr17 33775651 33776153 -55728400 - L1PA11 LINE L1 -1 6173 5680 3087 88 19 9 chr17 33776156 33776943 -55727610 + L1PA11 LINE L1 4873 5670 -498 688 338 147 17 chr17 33777012 33777660 -55726893 + L2 LINE L2 1974 2705 -609 186 194 0 0 chr17 33777950 33777986 -55726567 - L2 LINE L2 -977 2337 2302 24 0 0 0 chr17 33778200 33778224 -55726329 + AT_rich Low_complexity Low_complexity 1 24 0 2595 100 45 3 chr17 33778422 33778802 -55725751 + MER48 LTR ERV1 1 396 -2 1750 178 7 7 chr17 33779216 33779508 -55725045 - AluJb SINE Alu -20 292 1 2180 121 3 3 chr17 33779765 33780063 -55724490 - AluSc SINE Alu -11 298 1 1586 162 97 0 chr17 33780213 33780522 -55724031 + MER44D DNA MER2_type 1 609 0 4212 145 34 35 chr17 33782233 33783477 -55721076 + L1MA7 LINE L1 4896 6131 -160 1171 162 6 0 chr17 33783490 33783669 -55720884 - FRAM SINE Alu 0 176 1 917 112 50 0 chr17 33783669 33783830 -55720723 + L1MA6 LINE L1 6132 6300 0 23 0 0 0 chr17 33783946 33783969 -55720584 + AT_rich Low_complexity Low_complexity 1 23 0 1403 242 157 2 chr17 33784315 33784773 -55719780 + L1MC4 LINE L1 6463 6991 -1051 261 232 112 24 chr17 33785390 33785515 -55719038 - L1MC4 LINE L1 0 8042 7907 333 259 71 82 chr17 33785814 33785940 -55718613 - Charlie8 DNA MER1_type -46 284 159 2480 67 0 0 chr17 33785940 33786240 -55718313 - AluY SINE Alu -11 300 1 333 259 71 82 chr17 33786240 33786283 -55718270 - Charlie8 DNA MER1_type -171 159 117 1686 183 50 0 chr17 33786820 33787143 -55717410 + MER2 DNA MER2_type 1 339 -6 23 68 0 0 chr17 33787208 33787252 -55717301 + AT_rich Low_complexity Low_complexity 1 44 0 344 169 133 12 chr17 33787517 33787600 -55716953 + MER5C DNA MER1_type 32 124 -200 1516 199 20 10 chr17 33787810 33788106 -55716447 + MLT1A1 LTR MaLR 67 365 0 2235 110 3 3 chr17 33788772 33789081 -55715472 + AluY SINE Alu 1 309 -2 24 32 0 0 chr17 33789133 33789164 -55715389 + AT_rich Low_complexity Low_complexity 1 31 0 1167 198 0 55 chr17 33789234 33789472 -55715081 - AluJb SINE Alu -87 225 1 373 232 73 3 chr17 33790504 33790666 -55713887 + MLT1I LTR MaLR 270 401 -8 312 236 63 110 chr17 33790719 33790910 -55713643 - L1MC/D LINE L1 -2018 5790 5609 1627 148 31 16 chr17 33790923 33791180 -55713373 + AluJo SINE Alu 38 298 -14 1524 197 16 48 chr17 33791339 33791714 -55712839 + MLT1A1 LTR MaLR 3 365 0 279 310 0 0 chr17 33791756 33791827 -55712726 + (CATATA)n Simple_repeat Simple_repeat 1 71 0 22 70 0 0 chr17 33791905 33791948 -55712605 + AT_rich Low_complexity Low_complexity 1 43 0 1518 175 0 29 chr17 33791948 33792222 -55712331 - AluJo SINE Alu -46 266 1 2077 159 0 0 chr17 33792227 33792535 -55712018 - AluSx SINE Alu -4 308 1 2267 85 3 0 chr17 33793276 33793558 -55710995 - AluSx SINE Alu -14 298 16 513 294 162 19 chr17 33793957 33794222 -55710331 + L2 LINE L2 2238 2540 -774 265 296 11 80 chr17 33794429 33794605 -55709948 + MLT1L LTR MaLR 37 200 -415 674 214 81 38 chr17 33794693 33794903 -55709650 + MLT1L LTR MaLR 387 605 -10 723 278 66 12 chr17 33795108 33795349 -55709204 - MIR SINE MIR -3 259 6 323 258 11 43 chr17 33795639 33795732 -55708821 - MIR SINE MIR -6 256 167 356 221 0 63 chr17 33795808 33795903 -55708650 + L2 LINE L2 2483 2571 -743 547 326 58 87 chr17 33796023 33796471 -55708082 - L2 LINE L2 0 3272 2838 276 318 126 56 chr17 33796567 33796781 -55707772 - L2 LINE L2 -660 2654 2426 2273 105 0 3 chr17 33796889 33797194 -55707359 + AluSc SINE Alu 2 305 -4 875 267 116 26 chr17 33797556 33797945 -55706608 - MLT1J1 LTR MaLR -14 432 9 285 184 41 71 chr17 33798504 33798602 -55705951 - MLT1J2 LTR MaLR -287 163 69 378 295 73 123 chr17 33798909 33799251 -55705302 - L2 LINE L2 0 3272 2948 25 37 0 0 chr17 33799712 33799739 -55704814 + AT_rich Low_complexity Low_complexity 1 27 0 850 154 0 15 chr17 33799928 33800064 -55704489 - AluJo SINE Alu -178 134 1 833 220 57 68 chr17 33800518 33800681 -55703872 - MIR SINE MIR 0 262 102 2747 3 0 3 chr17 33800681 33800983 -55703570 + AluYa5 SINE Alu 1 301 -10 833 220 57 68 chr17 33800983 33801083 -55703470 - MIR SINE MIR -160 102 2 554 261 89 6 chr17 33801466 33801623 -55702930 + MIR SINE MIR 23 192 -70 770 280 100 14 chr17 33802323 33802673 -55701880 + L2 LINE L2 1775 2154 -1160 2043 115 7 7 chr17 33803376 33803671 -55700882 + AluSx SINE Alu 1 295 -17 4004 103 51 36 chr17 33804132 33804264 -55700289 - L1PB2 LINE L1 0 6151 6022 2309 85 3 3 chr17 33804264 33804557 -55699996 - AluSc SINE Alu -16 293 1 4004 103 51 36 chr17 33804557 33805091 -55699462 - L1PB2 LINE L1 -129 6022 5475 4692 186 41 23 chr17 33805091 33806260 -55698293 - L1PB2 LINE L1 -952 5194 4005 1140 269 68 25 chr17 33806381 33806820 -55697733 + MLT1C LTR MaLR 1 458 -9 195 231 328 15 chr17 33807286 33807420 -55697133 + L2 LINE L2 3077 3252 -61 905 180 205 11 chr17 33807653 33807936 -55696617 + L1MC4 LINE L1 6683 7020 -1022 2458 91 0 3 chr17 33807936 33808243 -55696310 + AluSx SINE Alu 1 306 -6 938 241 38 35 chr17 33808243 33808583 -55695970 + L1MC4 LINE L1 7697 8037 -5 650 294 65 14 chr17 33808894 33809187 -55695366 - L1ME LINE L1 -302 5819 5512 1482 188 4 11 chr17 33809493 33809765 -55694788 - AluJo SINE Alu -1 311 42 219 128 170 0 chr17 33809792 33809839 -55694714 + MIR SINE MIR 33 87 -175 198 273 18 18 chr17 33810047 33810102 -55694451 + L2 LINE L2 2243 2297 -1017 313 341 166 18 chr17 33810129 33810358 -55694195 + L2 LINE L2 2386 2648 -666 661 280 126 54 chr17 33810432 33810861 -55693692 + L2 LINE L2 2853 3312 -1 480 329 67 18 chr17 33811832 33812459 -55692094 - L1MEd LINE L1 -756 1734 988 879 199 60 45 chr17 33812483 33812749 -55691804 - L1ME2 LINE L1 -1 6163 5894 1974 124 3 17 chr17 33812770 33813069 -55691484 + AluSx SINE Alu 1 295 -17 1608 271 94 80 chr17 33813075 33813708 -55690845 + L2 LINE L2 2007 2669 -644 2412 60 0 10 chr17 33813708 33814008 -55690545 - AluY SINE Alu -14 297 1 1608 271 94 80 chr17 33814008 33814416 -55690137 + L2 LINE L2 2669 3070 -243 25 31 0 0 chr17 33814438 33814470 -55690083 + AT_rich Low_complexity Low_complexity 1 32 0 1011 232 30 21 chr17 33814653 33814890 -55689663 - MIR SINE MIR -11 251 13 647 294 113 0 chr17 33814926 33815157 -55689396 - MIR SINE MIR 0 262 6 241 228 0 18 chr17 33815272 33815329 -55689224 - L2 LINE L2 -1 3312 3257 188 292 21 0 chr17 33815988 33816036 -55688517 + MIR SINE MIR 214 262 0 1707 228 31 35 chr17 33816612 33817091 -55687462 - MLT1D LTR MaLR 0 505 29 956 259 52 65 chr17 33817140 33817522 -55687031 + MER21B LTR ERV1 26 402 -461 635 268 31 55 chr17 33817527 33817781 -55686772 + MER21B LTR ERV1 507 754 -109 567 252 101 59 chr17 33817854 33818262 -55686291 + MLT1H LTR MaLR 12 548 -1 482 280 104 43 chr17 33819298 33819614 -55684939 + L1MEc LINE L1 790 1085 -5311 2351 94 0 25 chr17 33819614 33819934 -55684619 + AluSx SINE Alu 1 312 0 482 280 104 43 chr17 33819934 33820500 -55684053 + L1MEc LINE L1 1085 1755 -4641 2158 139 0 7 chr17 33820523 33820832 -55683721 + AluSx SINE Alu 6 312 0 377 171 65 12 chr17 33820956 33821126 -55683427 + (TA)n Simple_repeat Simple_repeat 1 179 0 305 336 77 18 chr17 33821238 33821458 -55683095 + L1MEc LINE L1 1909 2141 -4255 1308 262 83 15 chr17 33822097 33822598 -55681955 + L1MEc LINE L1 2215 2785 -3430 2178 102 7 7 chr17 33822598 33822893 -55681660 - AluSg SINE Alu -15 295 1 1308 262 83 15 chr17 33822893 33823138 -55681415 + L1MEc LINE L1 2785 3012 -3203 520 329 92 45 chr17 33824308 33824776 -55679777 - L1MEd LINE L1 -4024 2286 1797 255 314 48 28 chr17 33824781 33825029 -55679524 - L1MEd LINE L1 -4572 1738 1486 1078 276 97 27 chr17 33825032 33825305 -55679248 - L1MEd LINE L1 -4869 1250 997 2158 104 10 10 chr17 33825305 33825603 -55678950 - AluSg SINE Alu -8 302 5 1078 276 97 27 chr17 33825603 33825997 -55678556 - L1MEd LINE L1 -5122 997 615 8526 168 68 38 chr17 33825997 33827699 -55676854 + MER52A LTR ERV1 4 1755 0 1078 276 97 27 chr17 33827699 33827994 -55676559 - L1MEd LINE L1 -5504 615 342 322 273 101 57 chr17 33828114 33828323 -55676230 - L1MEd LINE L1 -5891 228 11 383 291 125 66 chr17 33828335 33829205 -55675348 - L1M4 LINE L1 -2399 3747 2930 1899 140 0 38 chr17 33829205 33829497 -55675056 + AluSx SINE Alu 1 281 -31 378 0 0 0 chr17 33829499 33829541 -55675012 + (CA)n Simple_repeat Simple_repeat 2 43 0 383 291 125 66 chr17 33829541 33829606 -55674947 - L1M4 LINE L1 -3216 2930 2870 1791 137 23 23 chr17 33829606 33829906 -55674647 - AluSx SINE Alu -11 301 2 383 291 125 66 chr17 33829906 33830418 -55674135 - L1M4 LINE L1 -3276 2870 2210 279 301 15 52 chr17 33830661 33830797 -55673756 + MLT1J LTR MaLR 1 131 -380 722 252 35 22 chr17 33830862 33831092 -55673461 + MLT1J LTR MaLR 279 511 0 1534 181 60 3 chr17 33831816 33832098 -55672455 - AluJb SINE Alu -14 298 1 716 151 118 0 chr17 33832098 33832217 -55672336 - AluJo SINE Alu -177 135 3 21 0 0 0 chr17 33833057 33833078 -55671475 + AT_rich Low_complexity Low_complexity 1 21 0 3338 46 2 2 chr17 33833692 33834106 -55670447 + L1PA5 LINE L1 5737 6150 -4 1882 133 14 10 chr17 33834939 33835233 -55669320 - AluJo SINE Alu -17 295 1 198 191 0 0 chr17 33835430 33835477 -55669076 + (CA)n Simple_repeat Simple_repeat 2 48 0 904 191 12 12 chr17 33835544 33835717 -55668836 + FRAM SINE Alu 1 173 -3 1933 65 0 51 chr17 33836231 33836523 -55668030 + AluY SINE Alu 35 311 0 1385 144 19 41 chr17 33836534 33836805 -55667748 - MER2 DNA MER2_type -80 265 1 231 288 27 14 chr17 33837214 33837287 -55667266 + L2 LINE L2 633 706 -2608 2966 264 100 17 chr17 33837292 33838073 -55666480 + L2 LINE L2 1764 2479 -834 2198 80 0 14 chr17 33838073 33838399 -55666154 - AluY SINE Alu 0 322 1 2966 264 100 17 chr17 33838399 33839038 -55665515 + L2 LINE L2 2479 3299 -14 186 191 43 21 chr17 33840104 33840151 -55664402 - MIR SINE MIR -93 115 68 273 333 0 0 chr17 33841026 33841125 -55663428 + (TA)n Simple_repeat Simple_repeat 2 100 0 538 235 18 48 chr17 33841288 33841454 -55663099 + MIR3 SINE MIR 31 191 -17 1020 240 137 43 chr17 33841870 33842061 -55662492 + MLT1D LTR MaLR 1 173 -332 2339 94 0 0 chr17 33842061 33842358 -55662195 + AluSx SINE Alu 7 303 -9 1020 240 137 43 chr17 33842358 33842612 -55661941 + MLT1D LTR MaLR 173 488 -17 189 253 52 154 chr17 33842818 33843051 -55661502 + L2 LINE L2 2919 3127 -145 639 249 158 18 chr17 33843698 33843919 -55660634 + MLT1J2 LTR MaLR 55 306 -144 1834 152 14 0 chr17 33843966 33844249 -55660304 + AluJb SINE Alu 1 287 -25 347 331 60 24 chr17 33844404 33844570 -55659983 - MIR SINE MIR -70 192 21 2210 84 0 11 chr17 33844855 33845167 -55659386 + AluY SINE Alu 1 309 0 259 149 43 0 chr17 33845338 33845385 -55659168 + MIR SINE MIR 147 195 -67 34 42 0 0 chr17 33845626 33845674 -55658879 + AT_rich Low_complexity Low_complexity 1 48 0 5492 172 43 27 chr17 33845961 33847929 -55656624 + L1PB4 LINE L1 4156 6154 -2 2189 110 7 0 chr17 33848148 33848447 -55656106 + AluSx SINE Alu 1 301 -11 225 286 0 32 chr17 33848613 33848676 -55655877 - L2 LINE L2 0 3272 3212 264 338 0 0 chr17 33848804 33848884 -55655669 + L2 LINE L2 3230 3309 -4 1129 136 38 0 chr17 33851848 33852032 -55652521 + MER20 DNA MER1_type 17 207 -12 1842 179 68 97 chr17 33852568 33853278 -55651275 + L1MC5 LINE L1 7238 7926 -35 180 347 58 41 chr17 33855470 33855591 -55648962 + MIR3 SINE MIR 61 183 -25 908 304 88 34 chr17 33855824 33856390 -55648163 + L2 LINE L2 1796 2392 -922 621 276 75 114 chr17 33856430 33856912 -55647641 - L2 LINE L2 -4 3268 2806 587 298 38 72 chr17 33856929 33857164 -55647389 + L2 LINE L2 2477 2719 -595 2359 104 7 0 chr17 33857164 33857473 -55647080 + AluSx SINE Alu 2 312 0 2245 81 7 10 chr17 33857478 33857773 -55646780 + AluY SINE Alu 1 294 -17 587 298 38 72 chr17 33857773 33857850 -55646703 + L2 LINE L2 2723 2784 -530 404 305 70 18 chr17 33857916 33858204 -55646349 + L1ME LINE L1 5182 5483 -751 2266 98 7 3 chr17 33858217 33858512 -55646041 + AluSx SINE Alu 4 299 -13 388 262 67 24 chr17 33858517 33858681 -55645872 + L1ME LINE L1 5611 5781 -340 2266 134 35 32 chr17 33858711 33859145 -55645408 + L1MA7 LINE L1 5856 6290 -1 526 247 33 33 chr17 33860711 33860878 -55643675 + MIR SINE MIR 41 212 -50 1361 255 81 71 chr17 33860992 33861596 -55642957 + MLT1L LTR MaLR 1 610 -5 30 0 0 0 chr17 33861653 33861683 -55642870 + AT_rich Low_complexity Low_complexity 1 30 0 321 194 0 15 chr17 33864097 33864164 -55640389 + MARNA DNA Mariner 40 105 -481 222 37 0 0 chr17 33864741 33864768 -55639785 + (CGTG)n Simple_repeat Simple_repeat 1 27 0 561 109 209 18 chr17 33865019 33865129 -55639424 + LTR7 LTR ERV1 1 131 -319 4107 127 20 52 chr17 33865129 33866347 -55638206 + HERVH LTR ERV1 3 1492 -6221 1641 162 3 26 chr17 33867132 33867434 -55637119 + AluJo SINE Alu 1 295 -17 21 36 0 0 chr17 33867904 33867932 -55636621 + AT_rich Low_complexity Low_complexity 1 28 0 527 263 73 24 chr17 33868228 33868475 -55636078 + L1MC4a LINE L1 5666 5924 -1884 264 294 0 35 chr17 33869629 33869714 -55634839 - L2 LINE L2 0 3313 3232 2225 65 41 3 chr17 33869787 33870077 -55634476 + AluY SINE Alu 1 301 -10 428 284 36 74 chr17 33871258 33871723 -55632830 + L1MC4a LINE L1 5573 6016 -105 226 326 0 35 chr17 33871888 33871974 -55632579 + MIR SINE MIR 97 179 -83 300 228 149 26 chr17 33873311 33873425 -55631128 + HAL1 LINE L1 10 137 -2370 347 266 145 29 chr17 33873440 33873647 -55630906 - L1ME4a LINE L1 -294 5827 5597 22 35 0 0 chr17 33873945 33873974 -55630579 + AT_rich Low_complexity Low_complexity 1 29 0 473 302 0 7 chr17 33874473 33874612 -55629941 + MIR SINE MIR 17 154 -108 1922 144 3 13 chr17 33874798 33875096 -55629457 + AluSx SINE Alu 1 295 -17 26 30 0 0 chr17 33875485 33875518 -55629035 + AT_rich Low_complexity Low_complexity 1 33 0 665 234 0 0 chr17 33875557 33875681 -55628872 + FLAM_A SINE Alu 1 124 -9 197 282 39 51 chr17 33876080 33876158 -55628395 - L2 LINE L2 -17 3296 3220 3344 149 79 4 chr17 33877532 33878465 -55626088 - L1PBa LINE L1 -3324 3538 2532 2667 135 19 9 chr17 33878465 33878886 -55625667 + MER57B LTR ERV1 1 425 -9 7248 85 21 26 chr17 33878890 33879346 -55625207 - L1PBa LINE L1 -4328 2535 2078 1713 154 0 7 chr17 33879346 33879626 -55624927 - AluY SINE Alu -33 278 1 7248 85 21 26 chr17 33879626 33880263 -55624290 - L1PBa LINE L1 -4785 2078 1447 1709 255 38 65 chr17 33880533 33881638 -55622915 - L2 LINE L2 -1 3312 2237 2374 78 7 0 chr17 33882079 33882386 -55622167 + AluY SINE Alu 1 309 -2 884 159 50 39 chr17 33882393 33882575 -55621978 + AluJb SINE Alu 129 312 0 249 86 0 0 chr17 33882600 33882635 -55621918 + U2 snRNA snRNA 1 35 -153 206 287 161 23 chr17 33882657 33882744 -55621809 - MIR3 SINE MIR -99 109 11 549 261 89 6 chr17 33883829 33883986 -55620567 + MIR SINE MIR 23 192 -70 711 245 117 5 chr17 33884926 33885122 -55619431 - MIR SINE MIR 0 262 45 3040 166 93 30 chr17 33885317 33886059 -55618494 + L1MA9 LINE L1 5490 6278 -34 2613 74 8 11 chr17 33886077 33886441 -55618112 - L1PA13 LINE L1 -2 6161 5799 285 29 0 0 chr17 33886741 33886775 -55617778 + (CA)n Simple_repeat Simple_repeat 1 34 0 2849 27 0 6 chr17 33887070 33887407 -55617146 + L1P2 LINE L1 5482 5816 -339 3396 141 11 51 chr17 33888053 33888721 -55615832 - L1MB3 LINE L1 -1 6182 5542 21 36 0 0 chr17 33888767 33888795 -55615758 + AT_rich Low_complexity Low_complexity 1 28 0 264 231 39 26 chr17 33889280 33889358 -55615195 - L2 LINE L2 0 3272 3194 1805 152 3 44 chr17 33889580 33889896 -55614657 - AluJo SINE Alu -9 303 1 1845 185 0 6 chr17 33890059 33890373 -55614180 + AluJb SINE Alu 1 312 0 201 231 0 0 chr17 33890802 33890841 -55613712 + GA-rich Low_complexity Low_complexity 2 40 0 543 288 49 24 chr17 33890950 33891155 -55613398 + MIR SINE MIR 21 230 -32 2445 83 0 0 chr17 33891571 33891873 -55612680 - AluY SINE Alu -9 302 1 505 224 0 10 chr17 33892176 33892274 -55612279 + MIR SINE MIR 45 141 -121 229 167 0 0 chr17 33892537 33892579 -55611974 - MLT1J LTR MaLR -338 173 132 928 64 0 0 chr17 33892666 33892791 -55611762 - L1PA5 LINE L1 0 6154 6030 255 315 14 14 chr17 33893129 33893202 -55611351 - L2 LINE L2 -56 3216 3144 259 325 98 56 chr17 33893270 33893576 -55610977 + L2 LINE L2 2430 2756 -558 2191 121 0 0 chr17 33893576 33893881 -55610672 + AluSc SINE Alu 1 305 -4 259 325 98 56 chr17 33893881 33893950 -55610603 + L2 LINE L2 2756 2821 -493 252 388 69 47 chr17 33894033 33894353 -55610200 + L2 LINE L2 2946 3272 0 * 710 323 146 16 chr17 33894352 33894783 -55609770 - L3 LINE CR1 -175 1402 916 276 299 150 14 chr17 33895010 33895157 -55609396 - MIR SINE MIR -10 252 86 2134 208 30 132 chr17 33895194 33896173 -55608380 - L1ME3 LINE L1 -30 6132 5254 376 312 71 30 chr17 33896458 33896753 -55607800 - L1ME LINE L1 -482 5639 5333 339 316 44 71 chr17 33897264 33897652 -55606901 - L2 LINE L2 -5 3308 2620 365 367 94 0 chr17 33898953 33899133 -55605420 - L2 LINE L2 -56 3216 3020 219 227 0 45 chr17 33899453 33899519 -55605034 + CT-rich Low_complexity Low_complexity 3 65 0 318 322 46 40 chr17 33899532 33899706 -55604847 - MLT1K LTR MaLR -240 348 174 2092 144 17 6 chr17 33899708 33900054 -55604499 + MER47A DNA MER2_type 1 350 -16 1832 169 10 10 chr17 33900054 33900350 -55604203 + AluJb SINE Alu 1 296 -16 404 333 88 54 chr17 33900471 33901153 -55603400 - L2 LINE L2 -1640 1674 970 209 189 0 0 chr17 33901386 33901423 -55603130 + CT-rich Low_complexity Low_complexity 1 37 0 2454 87 0 6 chr17 33901755 33902067 -55602486 - AluSx SINE Alu -2 310 1 21 57 0 0 chr17 33902839 33902874 -55601679 + AT_rich Low_complexity Low_complexity 1 35 0 226 167 0 21 chr17 33902874 33902922 -55601631 + (CA)n Simple_repeat Simple_repeat 2 48 0 703 78 39 39 chr17 33903129 33903309 -55601244 + (TA)n Simple_repeat Simple_repeat 1 180 0 1693 162 3 21 chr17 33903328 33903612 -55600941 + AluJo SINE Alu 12 290 -22 23 33 0 0 chr17 33903624 33903654 -55600899 + AT_rich Low_complexity Low_complexity 1 30 0 334 186 29 49 chr17 33903928 33904030 -55600523 + L1ME4a LINE L1 5964 6063 -58 881 164 68 0 chr17 33904502 33904679 -55599874 - MER3 DNA MER1_type 0 209 21 1697 166 7 30 chr17 33905582 33905883 -55598670 + AluJo SINE Alu 4 297 -15 1921 154 3 3 chr17 33906413 33906699 -55597854 - AluSx SINE Alu -26 286 1 863 195 169 16 chr17 33907058 33907365 -55597188 + L1MC4 LINE L1 7688 8041 -1 6689 18 3 0 chr17 33907942 33908710 -55595843 + L1PA2 LINE L1 5382 6151 -4 22 70 0 0 chr17 33909340 33909383 -55595170 + AT_rich Low_complexity Low_complexity 1 43 0 210 37 0 0 chr17 33909888 33909915 -55594638 + (CAA)n Simple_repeat Simple_repeat 2 28 0 261 334 173 20 chr17 33909937 33910278 -55594275 + L2 LINE L2 1214 1606 -1708 1817 132 39 27 chr17 33910506 33910839 -55593714 - MER1B DNA MER1_type 0 337 1 1283 201 122 30 chr17 33912317 33912710 -55591843 - L1ME3A LINE L1 -9 6161 5733 479 326 129 29 chr17 33913352 33913941 -55590612 + L2 LINE L2 1541 2188 -1126 309 308 105 50 chr17 33914112 33914342 -55590211 + MIR SINE MIR 16 256 -6 2400 70 0 7 chr17 33914431 33914732 -55589821 + AluY SINE Alu 1 299 -12 335 351 48 12 chr17 33915220 33915385 -55589168 - L3 LINE CR1 -12 1565 1395 1994 209 62 22 chr17 33915389 33915925 -55588628 - L1MC4 LINE L1 -245 7797 7241 1369 226 185 31 chr17 33915931 33916472 -55588081 - L1MC4 LINE L1 -959 7083 6460 469 314 186 9 chr17 33916720 33916946 -55587607 - L3 LINE CR1 -219 1358 1093 771 257 158 54 chr17 33916952 33917504 -55587049 + MLT1L LTR MaLR 7 615 0 2359 89 10 3 chr17 33918210 33918514 -55586039 - AluY SINE Alu -5 306 1 1846 150 7 14 chr17 33918888 33919182 -55585371 + AluJb SINE Alu 1 292 -20 363 302 101 57 chr17 33919225 33919523 -55585030 + L2 LINE L2 2942 3252 -61 235 237 150 46 chr17 33919569 33919742 -55584811 + L1ME4a LINE L1 5839 6029 -92 185 306 222 14 chr17 33920027 33920171 -55584382 - MER5B DNA MER1_type 0 178 5 2403 85 0 0 chr17 33971324 33971630 -55532923 - AluSq SINE Alu -7 306 1 316 344 104 32 chr17 33972972 33973347 -55531206 - L2 LINE L2 -36 3236 2835 2139 118 0 0 chr17 33976816 33977120 -55527433 - AluSx SINE Alu -8 304 1 2212 103 3 6 chr17 33978353 33978664 -55525889 + AluSx SINE Alu 1 310 -2 372 222 160 28 chr17 33979731 33979875 -55524678 - MER103 DNA DNA -2 164 2 777 285 109 8 chr17 33980494 33980750 -55523803 + MER102b DNA MER1_type 50 331 -10 1788 134 36 0 chr17 33981003 33981280 -55523273 + AluJb SINE Alu 1 287 -25 22 0 0 0 chr17 33981285 33981307 -55523246 + AT_rich Low_complexity Low_complexity 1 22 0 364 219 79 18 chr17 33982818 33982932 -55521621 + MIR SINE MIR 17 137 -125 274 323 73 0 chr17 33983528 33983624 -55520929 - L2 LINE L2 -9 3263 3161 806 133 0 16 chr17 33983803 33983931 -55520622 + AluJb SINE Alu 161 286 -26 344 330 28 0 chr17 33984085 33984191 -55520362 - MIR SINE MIR -104 158 50 381 191 18 73 chr17 33984283 33984393 -55520160 + MER112 DNA MER1_type 148 251 -9 233 287 139 33 chr17 33984546 33984668 -55519885 - L2 LINE L2 -4 3309 3175 232 324 28 19 chr17 33984956 33985064 -55519489 - L2 LINE L2 -463 2851 2743 548 240 118 14 chr17 33985104 33985477 -55519076 - L1M4 LINE L1 -653 5521 5107 181 247 75 32 chr17 33985716 33985809 -55518744 - L2 LINE L2 -260 3012 2916 1137 275 116 73 chr17 33985809 33986866 -55517687 - L2 LINE L2 -43 3229 2148 267 241 13 25 chr17 33986914 33986993 -55517560 + L2 LINE L2 3220 3297 -16 662 0 0 13 chr17 33987246 33987325 -55517228 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 1758 166 0 16 chr17 33987325 33987629 -55516924 - AluJb SINE Alu -11 301 1 413 274 36 135 chr17 33988353 33988471 -55516082 - L2 LINE L2 0 3272 3195 671 216 58 23 chr17 33988471 33988642 -55515911 - MER5B DNA MER1_type 0 178 2 413 274 36 135 chr17 33988642 33988797 -55515756 - L2 LINE L2 -77 3195 3026 527 240 75 27 chr17 33988936 33989082 -55515471 + MER63A DNA MER1_type 58 210 0 232 341 79 43 chr17 33989379 33989543 -55515010 + L2 LINE L2 3113 3282 -31 23 0 0 0 chr17 33989567 33989590 -55514963 + AT_rich Low_complexity Low_complexity 1 23 0 207 116 70 0 chr17 33989609 33989652 -55514901 + T-rich Low_complexity Low_complexity 1 46 0 4714 28 0 2 chr17 33989654 33990197 -55514356 - L1PA5 LINE L1 -3 6151 5610 280 264 81 11 chr17 33990214 33990301 -55514252 + MIR SINE MIR 6 98 -164 207 69 0 0 chr17 33990305 33990334 -55514219 + (TG)n Simple_repeat Simple_repeat 1 29 0 199 357 14 0 chr17 33990335 33990405 -55514148 + MIR SINE MIR 183 253 -9 2039 130 0 0 chr17 33990413 33990705 -55513848 + AluSx SINE Alu 1 292 -20 2248 109 41 49 chr17 33991769 33992136 -55512417 + THE1B LTR MaLR 1 364 0 1406 159 41 25 chr17 33992235 33992342 -55512211 - L1MA4 LINE L1 -2 6298 6194 2787 112 40 7 chr17 33992342 33992762 -55511791 - MER57B LTR ERV1 0 434 1 1406 159 41 25 chr17 33992762 33992969 -55511584 - L1MA4 LINE L1 -106 6194 5979 205 283 61 10 chr17 33993181 33993280 -55511273 - MIR SINE MIR -77 131 28 493 287 82 49 chr17 33993539 33993745 -55510808 - MIR SINE MIR -17 245 34 817 217 42 0 chr17 33994476 33994642 -55509911 - MIR SINE MIR -58 204 32 443 252 19 65 chr17 33994682 33994783 -55509770 + MIR SINE MIR 49 142 -120 1771 137 7 23 chr17 33994783 33995082 -55509471 + AluJo SINE Alu 1 294 -18 443 252 19 65 chr17 33995082 33995135 -55509418 + MIR SINE MIR 142 196 -66 259 270 151 63 chr17 33995236 33995362 -55509191 - MIR3 SINE MIR -2 206 70 1089 248 42 17 chr17 33995362 33995816 -55508737 + MLT1J LTR MaLR 1 509 -2 312 321 28 0 chr17 33996325 33996434 -55508119 - L1MC4 LINE L1 0 8042 7931 21 0 0 0 chr17 33996632 33996653 -55507900 + AT_rich Low_complexity Low_complexity 1 21 0 383 199 25 7 chr17 33996653 33996791 -55507762 - L1MB8 LINE L1 -341 5837 5695 377 250 11 22 chr17 33996839 33996931 -55507622 + MER58B DNA MER1_type 1 91 -250 2071 116 30 0 chr17 33996978 33997280 -55507273 + AluSx SINE Alu 1 311 -1 2462 141 25 0 chr17 33997289 33997694 -55506859 - L1MB3 LINE L1 -7 6176 5762 1154 165 93 0 chr17 33997694 33997930 -55506623 + MER58B DNA MER1_type 84 341 0 244 333 11 0 chr17 33997942 33998032 -55506521 - L1MB3 LINE L1 -526 5644 5554 1543 173 19 10 chr17 33998181 33998488 -55506065 + AluJo SINE Alu 1 310 -2 496 100 11 11 chr17 33998906 33998996 -55505557 + (TTCC)n Simple_repeat Simple_repeat 4 93 0 1717 179 3 0 chr17 33999023 33999319 -55505234 - AluJb SINE Alu -15 297 1 234 191 0 0 chr17 33999319 33999366 -55505187 + CT-rich Low_complexity Low_complexity 3 49 0 998 149 45 68 chr17 33999368 33999589 -55504964 - AluJo SINE Alu -13 299 84 341 282 12 12 chr17 34000719 34000804 -55503749 - L2 LINE L2 0 3272 3188 2092 119 0 0 chr17 34001071 34001365 -55503188 - AluSx SINE Alu -16 296 3 192 77 0 0 chr17 34002348 34002374 -55502179 + (TG)n Simple_repeat Simple_repeat 1 26 0 207 268 37 37 chr17 34002642 34002724 -55501829 - MIR SINE MIR -171 91 10 292 244 99 46 chr17 34003043 34003174 -55501379 - MIR SINE MIR -7 255 118 410 281 90 6 chr17 34003928 34004095 -55500458 + HERVI LTR ERV1 187 367 -6282 527 288 35 39 chr17 34004332 34004561 -55499992 + HERVI LTR ERV1 776 1003 -6782 2693 57 0 0 chr17 34004777 34005110 -55499443 - L1PA5 LINE L1 -3875 2271 1939 25552 42 2 6 chr17 34005110 34009016 -55495537 + L1PA5 LINE L1 2263 6154 0 831 310 63 28 chr17 34009016 34009632 -55494921 + HERVI LTR ERV1 1299 1936 -5849 488 194 108 23 chr17 34009633 34009762 -55494791 + LTR18B LTR ERVL 353 492 -122 1939 320 17 28 chr17 34009783 34010721 -55493832 + HERVI LTR ERV1 4829 5756 -2029 379 236 34 34 chr17 34010946 34011065 -55493488 + HERVI LTR ERV1 3035 4857 -1792 1651 300 63 44 chr17 34011441 34012191 -55492362 + HERVI LTR ERV1 5290 6024 -1761 2088 110 0 10 chr17 34012191 34012490 -55492063 - AluSx SINE Alu -16 296 1 1651 300 63 44 chr17 34012490 34012949 -55491604 + HERVI LTR ERV1 6024 7647 -138 298 333 18 35 chr17 34013579 34013693 -55490860 - MIR3 SINE MIR -48 160 49 1006 235 28 5 chr17 34013713 34013926 -55490627 - MER20 DNA MER1_type -1 218 1 1417 136 86 76 chr17 34013951 34014253 -55490300 + AluSx SINE Alu 5 309 -3 182 312 39 26 chr17 34014473 34014550 -55490003 - MIR SINE MIR -84 178 101 1639 170 7 20 chr17 34015051 34015351 -55489202 - AluJo SINE Alu -16 296 1 253 344 76 23 chr17 34015354 34015485 -55489068 - MIR3 SINE MIR -67 141 4 234 128 0 0 chr17 34016197 34016236 -55488317 + (T)n Simple_repeat Simple_repeat 1 39 0 6991 17 0 0 chr17 34016274 34017055 -55487498 + L1PA2 LINE L1 5369 6149 -6 24 0 0 0 chr17 34017060 34017084 -55487469 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr17 34017144 34017166 -55487387 + AT_rich Low_complexity Low_complexity 1 22 0 2147 108 3 13 chr17 34017257 34017571 -55486982 - AluSx SINE Alu -1 311 1 980 229 176 49 chr17 34017571 34017761 -55486792 - L1MD2 LINE L1 -13 6346 6182 312 27 0 0 chr17 34017761 34017798 -55486755 + (TG)n Simple_repeat Simple_repeat 2 38 0 1357 112 182 8 chr17 34017798 34018040 -55486513 - AluSx SINE Alu -28 284 1 980 229 176 49 chr17 34018040 34018154 -55486399 - L1MD2 LINE L1 -176 6183 6002 223 336 196 16 chr17 34018552 34018802 -55485751 - L2 LINE L2 -466 2848 2554 577 253 112 25 chr17 34019165 34019406 -55485147 - MIR SINE MIR 0 262 1 778 37 9 9 chr17 34019573 34019680 -55484873 + (TCTA)n Simple_repeat Simple_repeat 2 108 0 307 162 0 54 chr17 34019717 34019758 -55484795 - MLT2B1 LTR ERVL 0 520 483 315 85 0 0 chr17 34019758 34019805 -55484748 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 307 162 0 54 chr17 34019805 34019837 -55484716 - MLT2B1 LTR ERVL -37 483 451 * 2240 123 3 3 chr17 34019816 34020126 -55484427 - THE1B LTR MaLR -54 310 1 10846 97 28 38 chr17 34020126 34021721 -55482832 - THE1B-int LTR MaLR 0 1580 1 180 111 0 0 chr17 34021734 34021761 -55482792 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 276 30 0 0 chr17 34021763 34021796 -55482757 + (TTCCC)n Simple_repeat Simple_repeat 2 34 0 2086 130 0 3 chr17 34021804 34022112 -55482441 - AluSp SINE Alu -6 307 1 2657 102 3 3 chr17 34022113 34022465 -55482088 - THE1B LTR MaLR -12 352 1 196 175 32 0 chr17 34022466 34022529 -55482024 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 1522 190 98 73 chr17 34022529 34022551 -55482002 - MLT2B1 LTR ERVL -40 480 460 1728 151 10 22 chr17 34022551 34022863 -55481690 - AluJo SINE Alu -4 308 1 1522 190 98 73 chr17 34022863 34023308 -55481245 - MLT2B1 LTR ERVL -60 460 1 609 250 7 9 chr17 34024082 34024227 -55480326 - MER5B DNA MER1_type -1 177 47 432 318 8 0 chr17 34024641 34024770 -55479783 - MIR SINE MIR -49 213 84 216 273 39 26 chr17 34024806 34024883 -55479670 - MIR SINE MIR -94 114 37 282 163 0 20 chr17 34024929 34024978 -55479575 - MER5B DNA MER1_type -16 162 115 2024 143 19 46 chr17 34024978 34025231 -55479322 + L1MB1 LINE L1 5338 5579 -589 1953 141 0 0 chr17 34025231 34025521 -55479032 + AluSg1 SINE Alu 3 292 -17 2024 143 19 46 chr17 34025521 34025638 -55478915 + L1MB1 LINE L1 5579 5698 -470 1708 138 39 116 chr17 34025638 34025815 -55478738 + THE1C LTR MaLR 1 131 -244 1756 121 67 11 chr17 34025815 34026097 -55478456 - AluSx SINE Alu -14 298 1 1708 138 39 116 chr17 34026097 34026325 -55478228 + THE1C LTR MaLR 131 375 0 9641 107 15 37 chr17 34026326 34027746 -55476807 - THE1C-int LTR MaLR -191 1389 1 1873 123 55 76 chr17 34027746 34028129 -55476424 - THE1C LTR MaLR 0 375 1 2181 147 25 98 chr17 34028129 34028189 -55476364 + L1MB1 LINE L1 5694 5757 -411 2651 165 7 2 chr17 34028189 34028613 -55475940 + MSTB LTR MaLR 1 426 0 2181 147 25 98 chr17 34028613 34028896 -55475657 + L1MB1 LINE L1 5757 5990 -178 2254 109 0 0 chr17 34028896 34029208 -55475345 + AluSx SINE Alu 1 312 0 2181 147 25 98 chr17 34029208 34029375 -55475178 + L1MB1 LINE L1 5990 6168 0 255 183 70 84 chr17 34029384 34029455 -55475098 - MER5B DNA MER1_type -48 130 61 403 310 146 9 chr17 34029510 34029736 -55474817 - MIR SINE MIR 0 262 6 206 330 50 10 chr17 34029869 34029969 -55474584 + L3 LINE CR1 1333 1436 -141 474 101 0 0 chr17 34030839 34030908 -55473645 + (TG)n Simple_repeat Simple_repeat 1 69 0 203 0 37 0 chr17 34031347 34031374 -55473179 + (GA)n Simple_repeat Simple_repeat 1 28 0 198 0 0 0 chr17 34031432 34031454 -55473099 + (A)n Simple_repeat Simple_repeat 1 22 0 270 267 67 9 chr17 34031483 34031588 -55472965 + MIR SINE MIR 120 230 -32 202 382 96 38 chr17 34031701 34031994 -55472559 - L2 LINE L2 -9 3263 2954 545 295 101 9 chr17 34033484 34033701 -55470852 - MIR SINE MIR -23 239 3 223 282 112 53 chr17 34034095 34034283 -55470270 - L2 LINE L2 -2782 532 334 204 125 0 0 chr17 34035003 34035035 -55469518 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 2227 96 0 3 chr17 34035451 34035753 -55468800 + AluSx SINE Alu 1 301 -11 263 244 116 0 chr17 34035769 34035855 -55468698 - L2 LINE L2 -4 3309 3214 186 382 9 27 chr17 34035841 34035951 -55468602 + MIR SINE MIR 37 144 -118 * 288 0 0 0 chr17 34036558 34036590 -55467963 + (TG)n Simple_repeat Simple_repeat 2 33 0 204 111 0 0 chr17 34036606 34036642 -55467911 + (CA)n Simple_repeat Simple_repeat 2 37 0 764 156 45 96 chr17 34037341 34037540 -55467013 + MER53 DNA DNA 1 189 0 319 263 25 34 chr17 34038451 34038569 -55465984 - MIR SINE MIR -60 202 86 26 64 0 0 chr17 34038662 34038709 -55465844 + AT_rich Low_complexity Low_complexity 1 47 0 4683 165 25 21 chr17 34038709 34038901 -55465652 - L1PB4 LINE L1 -2 6154 5964 1830 132 36 7 chr17 34038901 34039182 -55465371 - AluSg SINE Alu -21 289 1 4683 165 25 21 chr17 34039182 34039824 -55464729 - L1PB4 LINE L1 -192 5964 5326 1797 159 7 3 chr17 34039824 34040120 -55464433 - AluJb SINE Alu -15 297 1 4683 165 25 21 chr17 34040120 34040908 -55463645 - L1PB4 LINE L1 -830 5326 4523 321 335 92 42 chr17 34041376 34041713 -55462840 + L2 LINE L2 2461 2814 -500 185 345 202 0 chr17 34041830 34041949 -55462604 + L2 LINE L2 2838 2980 -333 193 324 125 17 chr17 34042160 34042336 -55462217 + L2 LINE L2 2312 2506 -808 567 74 0 53 chr17 34042420 34042515 -55462038 - L1PA5 LINE L1 0 6154 6065 615 89 0 0 chr17 34042506 34042585 -55461968 - AluJb SINE Alu -18 294 216 440 160 13 27 chr17 34042578 34042653 -55461900 - AluJb SINE Alu -128 184 111 * 505 297 121 62 chr17 34042655 34042978 -55461575 + L2 LINE L2 2970 3311 -2 333 252 44 117 chr17 34043320 34043526 -55461027 + MIR SINE MIR 66 256 -6 226 245 0 19 chr17 34043662 34043715 -55460838 + GA-rich Low_complexity Low_complexity 3 54 0 250 305 58 65 chr17 34044123 34044196 -55460357 - MER117 DNA MER1_type -44 153 81 2081 125 35 0 chr17 34044196 34044485 -55460068 - AluSx SINE Alu -13 299 1 250 305 58 65 chr17 34044485 34044565 -55459988 - MER117 DNA MER1_type -116 81 1 332 313 90 0 chr17 34044593 34044737 -55459816 - MIR SINE MIR -83 179 23 196 294 193 8 chr17 34044874 34044993 -55459560 + L2 LINE L2 2897 3037 -235 1328 87 3 9 chr17 34045075 34045305 -55459248 + (TTTC)n Simple_repeat Simple_repeat 1 231 -367 180 0 0 0 chr17 34045305 34045325 -55459228 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 1328 87 3 9 chr17 34045325 34045498 -55459055 + (TTTC)n Simple_repeat Simple_repeat 231 598 0 186 133 0 0 chr17 34045516 34045546 -55459007 + (TTTC)n Simple_repeat Simple_repeat 4 33 0 2365 99 0 0 chr17 34045551 34045855 -55458698 - AluSc SINE Alu 0 309 6 399 198 58 12 chr17 34045901 34045987 -55458566 + L2 LINE L2 3177 3266 -6 1217 137 11 6 chr17 34046926 34047101 -55457452 - AluJb SINE Alu -136 176 1 333 345 27 0 chr17 34047253 34047363 -55457190 - MIR SINE MIR -50 212 100 586 250 23 52 chr17 34047403 34047566 -55456987 - MIR3 SINE MIR -11 197 38 2373 86 3 10 chr17 34047566 34047880 -55456673 + AluSx SINE Alu 1 312 0 207 100 0 0 chr17 34049234 34049264 -55455289 + (TTAA)n Simple_repeat Simple_repeat 4 33 0 180 292 21 0 chr17 34049882 34049930 -55454623 + L2 LINE L2 2118 2166 -1148 397 323 30 15 chr17 34050086 34050219 -55454334 + MIR3 SINE MIR 30 164 -44 2086 188 12 60 chr17 34050241 34050406 -55454147 + MLT1D LTR MaLR 15 186 -319 2149 130 0 0 chr17 34050406 34050698 -55453855 + AluSx SINE Alu 1 292 -20 2086 188 12 60 chr17 34050698 34051048 -55453505 + MLT1D LTR MaLR 186 505 0 253 306 19 37 chr17 34051314 34051422 -55453131 - MIR SINE MIR -62 146 41 192 250 54 18 chr17 34051508 34051564 -55452989 - MIR SINE MIR -130 78 21 241 256 12 12 chr17 34052390 34052472 -55452081 + A-rich Low_complexity Low_complexity 3 84 0 343 290 155 25 chr17 34054070 34054270 -55450283 - MIR SINE MIR -12 250 25 237 227 227 0 chr17 34054655 34054721 -55449832 + MIR SINE MIR 63 143 -65 182 231 51 0 chr17 34054717 34054756 -55449797 + L2 LINE L2 3210 3250 -22 * 303 306 25 69 chr17 34057536 34057696 -55446857 + MER5B DNA MER1_type 25 177 -1 297 298 30 96 chr17 34057844 34058042 -55446511 + MIR3 SINE MIR 17 201 -7 375 268 6 22 chr17 34058528 34058707 -55445846 + (TG)n Simple_repeat Simple_repeat 1 176 0 207 0 0 0 chr17 34059041 34059064 -55445489 + (TC)n Simple_repeat Simple_repeat 2 24 0 215 158 0 18 chr17 34059085 34059142 -55445411 + GA-rich Low_complexity Low_complexity 1 56 0 477 244 49 0 chr17 34059506 34059629 -55444924 - MIR SINE MIR -74 188 60 305 309 24 24 chr17 34060149 34060272 -55444281 - MIR3 SINE MIR -2 206 84 535 302 24 0 chr17 34060573 34060742 -55443811 - MIR3 SINE MIR -7 201 29 258 325 60 0 chr17 34061399 34061516 -55443037 + L2 LINE L2 2583 2706 -608 626 229 19 25 chr17 34061519 34061676 -55442877 - MER3 DNA MER1_type -49 160 5 770 270 68 76 chr17 34061900 34062182 -55442371 - L2 LINE L2 0 3313 3033 851 176 0 0 chr17 34062182 34062313 -55442240 - FLAM_C SINE Alu -1 132 2 770 270 68 76 chr17 34062313 34062412 -55442141 - L2 LINE L2 -280 3033 2935 2428 88 0 10 chr17 34062451 34062759 -55441794 + AluY SINE Alu 1 305 -6 421 300 25 96 chr17 34062765 34063005 -55441548 + L2 LINE L2 3040 3262 -10 1922 159 169 12 chr17 34063826 34064229 -55440324 + MER31B LTR ERV1 1 466 0 286 318 0 24 chr17 34064892 34065018 -55439535 + CT-rich Low_complexity Low_complexity 1 123 0 385 278 76 67 chr17 34065565 34065788 -55438765 - MIR SINE MIR -33 229 5 956 174 18 96 chr17 34066214 34066495 -55438058 - MLT1D LTR MaLR -50 455 197 315 223 124 83 chr17 34066545 34066666 -55437887 + L1ME LINE L1 5698 5823 -298 330 266 83 0 chr17 34066817 34066926 -55437627 - MIR SINE MIR -122 140 23 847 156 8 0 chr17 34067799 34067927 -55436626 - FLAM_A SINE Alu -1 132 4 3593 215 27 23 chr17 34068366 34069355 -55435198 - L1ME2 LINE L1 0 6098 5109 1433 191 30 44 chr17 34069353 34069719 -55434834 - L1ME2 LINE L1 0 6164 5804 * 2750 252 52 41 chr17 34069716 34071686 -55432867 - L1ME2 LINE L1 -1947 4133 1705 2109 150 3 0 chr17 34071686 34071993 -55432560 - AluSx SINE Alu -4 308 1 2750 252 52 41 chr17 34071993 34072219 -55432334 - L1ME2 LINE L1 -4375 1705 1483 1638 149 14 32 chr17 34072233 34072341 -55432212 + AluJo SINE Alu 1 109 -203 7590 118 65 22 chr17 34072341 34073566 -55430987 + MER52C LTR ERV1 2 1278 0 1638 149 14 32 chr17 34073566 34073738 -55430815 + AluJo SINE Alu 109 276 -36 204 40 0 0 chr17 34073743 34073768 -55430785 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1288 283 51 54 chr17 34073793 34074786 -55429767 - L1ME2 LINE L1 -4744 1517 528 637 279 130 43 chr17 34074960 34075405 -55429148 - L1ME2 LINE L1 -5577 493 10 418 216 27 54 chr17 34075450 34075561 -55428992 - MIR SINE MIR -98 164 57 1372 178 114 26 chr17 34075689 34075953 -55428600 - AluJo SINE Alu -25 287 1 521 219 17 25 chr17 34076070 34076189 -55428364 + MIR3 SINE MIR 82 199 -9 1125 87 50 0 chr17 34076197 34076358 -55428195 + L1PA14 LINE L1 5992 6160 -1 207 0 0 0 chr17 34076635 34076658 -55427895 + (T)n Simple_repeat Simple_repeat 1 23 0 335 301 44 18 chr17 34076823 34076936 -55427617 + L3 LINE CR1 1204 1319 -258 622 313 27 40 chr17 34077006 34077230 -55427323 + L3 LINE CR1 1330 1550 -27 233 248 10 109 chr17 34077312 34077413 -55427140 + MIR SINE MIR 54 144 -118 423 239 166 6 chr17 34077633 34077796 -55426757 - L2 LINE L2 -991 2323 2135 359 273 70 64 chr17 34078657 34078844 -55425709 + MIR SINE MIR 18 205 -57 250 279 13 13 chr17 34079040 34079119 -55425434 + CT-rich Low_complexity Low_complexity 5 83 0 198 261 46 15 chr17 34079669 34079734 -55424819 + MIR3 SINE MIR 108 174 -34 282 305 53 11 chr17 34080190 34080285 -55424268 - L2 LINE L2 -13 3300 3202 600 253 27 7 chr17 34080396 34080546 -55424007 + MIR SINE MIR 72 224 -38 230 222 0 0 chr17 34080706 34080751 -55423802 + L2 LINE L2 3269 3313 0 578 191 0 0 chr17 34080835 34080929 -55423624 - L1M1 LINE L1 -7112 453 360 279 182 18 0 chr17 34081059 34081114 -55423439 + MIR SINE MIR 84 139 -69 274 222 0 16 chr17 34081630 34081693 -55422860 - MIR SINE MIR -50 212 151 846 267 29 5 chr17 34081733 34081943 -55422610 - MIR SINE MIR -4 258 44 397 273 147 33 chr17 34082116 34082174 -55422379 - MIR SINE MIR -58 204 154 2369 81 7 0 chr17 34082174 34082469 -55422084 - AluY SINE Alu -13 298 2 397 273 147 33 chr17 34082469 34082545 -55422008 - MIR SINE MIR -108 154 53 267 331 199 7 chr17 34082545 34082681 -55421872 + MIR3 SINE MIR 4 165 -43 236 115 0 77 chr17 34082737 34082789 -55421764 - MER117 DNA MER1_type -35 162 115 751 139 7 7 chr17 34083447 34083591 -55420962 + (TCCA)n Simple_repeat Simple_repeat 1 144 0 2051 123 41 0 chr17 34083613 34083906 -55420647 - AluSx SINE Alu -7 305 1 622 337 46 54 chr17 34083907 34084299 -55420254 - L2 LINE L2 -11 3261 2873 356 259 125 0 chr17 34085177 34085289 -55419264 + MER91C DNA MER1_type 1 126 -14 1972 152 7 3 chr17 34086588 34086885 -55417668 - AluJo SINE Alu -14 298 1 1324 202 79 66 chr17 34087169 34087550 -55417003 + MLT1B LTR MaLR 1 386 -4 301 275 156 0 chr17 34087804 34087913 -55416640 - MIR SINE MIR -110 152 27 492 297 49 46 chr17 34088565 34088627 -55415926 + MIR SINE MIR 23 83 -179 430 233 56 72 chr17 34088627 34088807 -55415746 + MER104 DNA MER2_type 1 177 -3 492 297 49 46 chr17 34088807 34089069 -55415484 + MIR SINE MIR 83 262 0 193 229 156 73 chr17 34089580 34089689 -55414864 + MIR SINE MIR 15 132 -130 535 327 51 0 chr17 34090138 34090294 -55414259 - MIR SINE MIR -94 168 5 349 344 27 6 chr17 34090444 34090581 -55413972 - MIR SINE MIR -65 143 15 532 312 91 20 chr17 34090821 34091020 -55413533 + MIR SINE MIR 34 246 -16 726 266 168 28 chr17 34092047 34092404 -55412149 + MLT1J2 LTR MaLR 44 450 0 230 316 125 37 chr17 34092790 34092926 -55411627 + L2 LINE L2 2595 2742 -572 340 251 66 109 chr17 34093543 34093726 -55410827 + MIR3 SINE MIR 33 207 -1 577 186 0 0 chr17 34094783 34094869 -55409684 - FRAM SINE Alu -38 138 53 501 266 70 13 chr17 34095086 34095128 -55409425 - MIR3 SINE MIR -1 207 169 517 233 34 45 chr17 34095128 34095304 -55409249 + MER5B DNA MER1_type 1 174 -4 501 266 70 13 chr17 34095304 34095419 -55409134 - MIR3 SINE MIR -39 169 41 213 94 0 0 chr17 34096244 34096276 -55408277 + (TG)n Simple_repeat Simple_repeat 2 33 0 382 295 54 48 chr17 34096353 34096519 -55408034 + MER5A DNA MER1_type 18 184 -5 261 247 86 0 chr17 34096602 34096683 -55407870 + MIR3 SINE MIR 98 185 -23 181 255 20 20 chr17 34097421 34097472 -55407081 - MIR SINE MIR -56 206 156 207 133 0 0 chr17 34097716 34097761 -55406792 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 714 261 49 71 chr17 34097928 34098325 -55406228 + L1ME4a LINE L1 5558 5947 -206 38733 46 1 6 chr17 34098413 34103966 -55400587 - L1PA5 LINE L1 -9 6145 623 723 68 0 0 chr17 34103964 34104052 -55400501 - L1PA5 LINE L1 -6048 98 11 * 284 313 53 15 chr17 34104195 34104326 -55400227 + MIR SINE MIR 13 148 -114 1427 217 11 3 chr17 34104434 34104720 -55399833 - AluJo SINE Alu -24 288 1 587 139 19 19 chr17 34104727 34104835 -55399718 - AluJo SINE Alu -178 134 27 241 366 84 0 chr17 34105074 34105216 -55399337 - MIR SINE MIR -63 199 46 345 264 0 22 chr17 34105835 34105926 -55398627 - MIR3 SINE MIR -47 161 73 340 350 133 11 chr17 34106024 34106384 -55398169 - L2 LINE L2 -4 3268 2865 217 207 121 0 chr17 34106537 34106595 -55397958 - L2 LINE L2 -184 3088 3024 379 256 33 0 chr17 34107427 34107517 -55397036 - MER81 DNA DNA -17 97 5 1534 103 42 19 chr17 34107560 34107813 -55396740 + AluSp SINE Alu 64 321 0 6785 230 53 56 chr17 34107863 34109549 -55395004 - L1MEc LINE L1 -2758 3457 1767 340 107 0 173 chr17 34109549 34109587 -55394966 + MADE1 DNA Mariner 2 22 -58 2321 92 3 3 chr17 34109587 34109881 -55394672 - AluSc SINE Alu -15 294 1 340 107 0 173 chr17 34109881 34109917 -55394636 + MADE1 DNA Mariner 22 63 -17 6785 230 53 56 chr17 34109917 34111627 -55392926 - L1MEc LINE L1 -4448 1767 35 441 0 0 0 chr17 34162116 34162165 -55342388 + (TTTTG)n Simple_repeat Simple_repeat 1 49 0 414 309 15 0 chr17 34162237 34162438 -55342115 - AluSc SINE Alu -105 204 1 2178 103 0 0 chr17 34162490 34162804 -55341749 + AluSg SINE Alu 1 314 0 250 287 16 90 chr17 34162818 34162940 -55341613 + MER5B DNA MER1_type 66 178 0 509 294 87 16 chr17 34163293 34163477 -55341076 - MIR SINE MIR -34 228 32 * 1081 261 194 36 chr17 34163452 34164297 -55340256 + L2 LINE L2 2333 3292 -21 276 30 0 0 chr17 34164301 34164334 -55340219 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 539 338 89 18 chr17 34164661 34164886 -55339667 + MIR SINE MIR 21 261 -1 238 288 0 38 chr17 34165471 34165551 -55339002 - MIR3 SINE MIR -28 180 104 660 249 58 23 chr17 34165791 34165964 -55338589 + MIR SINE MIR 70 248 -14 1950 151 3 0 chr17 34165965 34166276 -55338277 + AluJb SINE Alu 1 312 0 209 209 0 0 chr17 34166362 34166405 -55338148 - MIR SINE MIR -109 153 111 248 217 0 0 chr17 34167267 34167313 -55337240 - L2 LINE L2 -13 3300 3255 1051 316 55 16 chr17 34167315 34167748 -55336805 + L2 LINE L2 2852 3301 -12 261 0 0 0 chr17 34167899 34167928 -55336625 + (T)n Simple_repeat Simple_repeat 1 29 0 268 300 45 0 chr17 34168939 34169049 -55335504 + LTR67 LTR ERVL 439 553 -4 206 260 82 14 chr17 34169068 34169141 -55335412 - L2 LINE L2 -50 3222 3145 806 292 58 53 chr17 34169646 34170006 -55334547 - L2 LINE L2 0 3313 2952 267 79 0 0 chr17 34170649 34170687 -55333866 + (CA)n Simple_repeat Simple_repeat 1 38 0 226 122 0 24 chr17 34171532 34171573 -55332980 + (TG)n Simple_repeat Simple_repeat 1 40 0 201 180 20 20 chr17 34171941 34171991 -55332562 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 398 314 26 26 chr17 34172246 34172402 -55332151 + MIR SINE MIR 97 252 -10 246 381 0 0 chr17 34173093 34173177 -55331376 + MIR SINE MIR 154 237 -25 244 279 75 125 chr17 34173292 34173772 -55330781 + L2 LINE L2 2352 2807 -507 1330 211 52 36 chr17 34173985 34174350 -55330203 + MSTD LTR MaLR 1 371 -25 4322 222 20 46 chr17 34174357 34175387 -55329166 + MSTD-int LTR MaLR 2 1005 -730 305 317 16 8 chr17 34175490 34175613 -55328940 + MIR SINE MIR 136 259 -3 280 353 17 17 chr17 34175617 34175736 -55328817 - MIR SINE MIR -124 138 20 383 314 121 29 chr17 34176842 34177081 -55327472 - L3 LINE CR1 -7 1570 1310 238 208 21 21 chr17 34177264 34177312 -55327241 + MIR SINE MIR 32 79 -129 975 346 122 22 chr17 34177383 34178333 -55326220 + L2 LINE L2 2228 3272 0 818 222 68 11 chr17 34178857 34179033 -55325520 + MER5A DNA MER1_type 1 186 -3 295 320 125 30 chr17 34179057 34179257 -55325296 + MIR SINE MIR 31 249 -13 674 310 58 4 chr17 34179773 34179999 -55324554 + MIR SINE MIR 8 245 -17 1938 120 10 13 chr17 34180287 34180587 -55323966 + AluSx SINE Alu 1 299 -13 386 294 48 55 chr17 34180605 34180751 -55323802 - L2 LINE L2 0 3272 3128 688 247 237 23 chr17 34180761 34181065 -55323488 + MLT1I LTR MaLR 41 409 0 249 368 24 16 chr17 34181818 34182068 -55322485 + L2 LINE L2 2494 2745 -569 655 297 106 43 chr17 34182171 34182501 -55322052 + L2 LINE L2 2899 3254 -18 1677 145 16 36 chr17 34182501 34182805 -55321748 - AluJb SINE Alu -14 298 1 655 297 106 43 chr17 34182805 34182824 -55321729 + L2 LINE L2 3254 3270 -2 239 261 0 68 chr17 34182842 34182930 -55321623 - MIR SINE MIR -71 191 110 199 286 0 0 chr17 34183969 34184011 -55320542 - L2 LINE L2 -16 3256 3215 225 205 0 0 chr17 34184219 34184258 -55320295 - Charlie4 DNA MER1_type -1920 41 3 958 163 37 5 chr17 34184269 34184459 -55320094 + L1MA8 LINE L1 6091 6286 -5 510 258 16 8 chr17 34184604 34184728 -55319825 - L2 LINE L2 -2 3311 3187 187 221 247 13 chr17 34184735 34184812 -55319741 - L2 LINE L2 -241 3031 2937 25 0 0 0 chr17 34185499 34185524 -55319029 + AT_rich Low_complexity Low_complexity 1 25 0 474 332 79 5 chr17 34185746 34185936 -55318617 - MIR SINE MIR -6 256 53 392 306 34 27 chr17 34187323 34187470 -55317083 + MIR SINE MIR 22 169 -93 932 212 103 87 chr17 34187577 34188002 -55316551 - MLT1C LTR MaLR -23 444 13 1406 279 72 21 chr17 34188037 34188521 -55316032 - L2 LINE L2 -398 2916 2408 486 260 26 35 chr17 34189209 34189365 -55315188 - MIR SINE MIR -54 154 15 602 322 24 15 chr17 34190081 34190286 -55314267 + MIR SINE MIR 56 262 0 319 304 11 11 chr17 34190306 34190398 -55314155 - MIR SINE MIR -55 153 62 1687 229 73 42 chr17 34191623 34192173 -55312380 + L1ME1 LINE L1 114 680 -5716 308 120 0 20 chr17 34192184 34192234 -55312319 - MER58A DNA MER1_type 0 224 176 9117 88 19 23 chr17 34192234 34192336 -55312217 + HSMAR1 DNA Mariner 1 102 -1185 1881 144 0 10 chr17 34192336 34192635 -55311918 - AluSx SINE Alu -16 296 1 9117 88 19 23 chr17 34192635 34193818 -55310735 + HSMAR1 DNA Mariner 102 1280 -7 757 234 5 43 chr17 34193821 34194005 -55310548 - MER58A DNA MER1_type -47 177 1 3192 239 68 49 chr17 34194006 34195359 -55309194 + L1ME1 LINE L1 687 2065 -4331 808 200 42 36 chr17 34195379 34195544 -55309009 + MER20 DNA MER1_type 54 219 0 1438 217 91 28 chr17 34195546 34196188 -55308365 + L1ME1 LINE L1 2059 2689 -3526 * 2433 228 41 36 chr17 34196186 34196983 -55307570 + L1ME1 LINE L1 4107 4907 -1308 2857 221 18 53 chr17 34196988 34197801 -55306752 + L1ME1 LINE L1 5463 6403 0 504 158 0 0 chr17 34197815 34197910 -55306643 + GA-rich Low_complexity Low_complexity 3 97 0 357 227 23 23 chr17 34198090 34198178 -55306375 - MLT1L LTR MaLR -337 278 191 208 306 28 14 chr17 34198277 34198349 -55306204 + CT-rich Low_complexity Low_complexity 3 75 0 1430 110 0 31 chr17 34198441 34198760 -55305793 + AluSq SINE Alu 64 375 0 547 236 70 85 chr17 34199714 34199973 -55304580 + LTR16C LTR ERVL 26 280 -211 384 238 40 10 chr17 34199996 34200097 -55304456 - MER5A DNA MER1_type -77 112 9 368 283 98 15 chr17 34200100 34200305 -55304248 + LTR16C LTR ERVL 270 491 0 180 343 35 56 chr17 34200451 34200594 -55303959 + L2 LINE L2 2919 3058 -214 199 327 0 65 chr17 34200643 34200750 -55303803 + MIR SINE MIR 114 213 -49 361 287 74 0 chr17 34201628 34201736 -55302817 + MIR SINE MIR 71 186 -76 25 0 0 0 chr17 34201825 34201850 -55302703 + AT_rich Low_complexity Low_complexity 1 25 0 337 277 66 18 chr17 34201997 34202107 -55302446 - MIR SINE MIR -62 146 37 181 371 9 35 chr17 34202172 34202288 -55302265 + MIR SINE MIR 63 175 -87 271 339 161 0 chr17 34202485 34202597 -55301956 - MIR SINE MIR -113 149 20 363 44 0 0 chr17 34202619 34202664 -55301889 + (ATG)n Simple_repeat Simple_repeat 2 46 0 407 208 77 174 chr17 34203318 34203525 -55301028 + MIR3 SINE MIR 22 208 0 336 256 0 13 chr17 34203566 34203644 -55300909 + MIR SINE MIR 2 78 -184 1999 287 68 20 chr17 34203656 34204317 -55300236 + MER115 DNA AcHobo 1 693 0 245 329 0 12 chr17 34204320 34204405 -55300148 + MIR SINE MIR 90 173 -89 1814 147 3 10 chr17 34204405 34204704 -55299849 + AluJb SINE Alu 6 302 -10 372 335 43 22 chr17 34205780 34205965 -55298588 + MIR SINE MIR 50 238 -24 369 218 72 100 chr17 34206212 34206482 -55298071 + L2 LINE L2 2780 3048 -224 186 343 30 0 chr17 34206582 34206649 -55297904 + L2 LINE L2 3194 3262 -10 1997 226 148 35 chr17 34206656 34207671 -55296882 + L2 LINE L2 2170 3312 -1 2673 139 4 88 chr17 34207735 34208117 -55296436 + MER66A LTR ERV1 8 338 -140 1455 179 50 17 chr17 34208117 34208419 -55296134 + AluJb SINE Alu 1 312 0 2673 139 4 88 chr17 34208419 34208546 -55296007 + MER66A LTR ERV1 338 474 -4 767 239 62 112 chr17 34210971 34211472 -55293081 + MLT1K LTR MaLR 1 476 0 243 296 15 22 chr17 34211852 34211987 -55292566 - MER103 DNA DNA -31 135 2 189 367 166 0 chr17 34212774 34212913 -55291640 - MIR SINE MIR -54 208 47 213 282 122 38 chr17 34213344 34213475 -55291078 + MIR SINE MIR 12 153 -109 251 274 48 57 chr17 34213525 34213649 -55290904 - L2 LINE L2 -8 3305 3183 244 261 0 15 chr17 34213746 34213811 -55290742 - MIR SINE MIR -108 154 91 267 324 20 29 chr17 34213862 34213964 -55290589 - MIR SINE MIR -56 206 106 1470 248 137 20 chr17 34214049 34214488 -55290065 + LTR16C LTR ERVL 1 490 -1 871 283 138 40 chr17 34214829 34215125 -55289428 + L2 LINE L2 2844 3196 -117 231 61 0 0 chr17 34215125 34215158 -55289395 + (TTA)n Simple_repeat Simple_repeat 1 33 0 871 283 138 40 chr17 34215158 34215288 -55289265 + L2 LINE L2 3196 3312 -1 321 311 0 9 chr17 34215336 34215442 -55289111 + LTR16C LTR ERVL 311 415 -76 278 306 82 0 chr17 34215519 34215617 -55288936 - MIR SINE MIR -152 110 5 1209 173 28 5 chr17 34215881 34216095 -55288458 - MER20 DNA MER1_type 0 219 1 252 341 132 0 chr17 34216098 34216189 -55288364 + L2 LINE L2 3199 3301 -12 206 136 23 0 chr17 34216200 34216244 -55288309 + (TGAA)n Simple_repeat Simple_repeat 4 48 0 586 293 89 16 chr17 34217725 34217916 -55286637 - MER63A DNA MER1_type 0 210 6 405 330 96 14 chr17 34218386 34218595 -55285958 - MIR SINE MIR -17 245 20 2083 179 97 26 chr17 34218618 34219081 -55285472 + MLT1D LTR MaLR 2 497 -8 318 248 76 48 chr17 34219363 34219468 -55285085 + MIR3 SINE MIR 9 116 -92 562 245 194 0 chr17 34221096 34221235 -55283318 - MER5A DNA MER1_type -8 181 16 365 373 45 0 chr17 34221301 34221502 -55283051 - MIR SINE MIR -17 245 36 452 288 109 24 chr17 34221556 34222181 -55282372 + L1ME4a LINE L1 5342 6040 -81 2361 41 7 7 chr17 34222222 34222517 -55282036 - AluY SINE Alu -16 295 1 343 289 88 66 chr17 34223140 34223548 -55281005 - L2 LINE L2 -429 2885 2469 427 273 203 12 chr17 34224140 34224355 -55280198 + MIR SINE MIR 1 252 -10 183 263 0 0 chr17 34225207 34225245 -55279308 + L2 LINE L2 3217 3254 -18 181 288 51 59 chr17 34225805 34225923 -55278630 - MIR SINE MIR -6 256 140 290 324 56 0 chr17 34225975 34226083 -55278470 - MIR SINE MIR -37 225 112 553 249 220 22 chr17 34226730 34227003 -55277550 - L3 LINE CR1 -96 1481 1155 533 270 69 37 chr17 34227028 34227219 -55277334 + MIR SINE MIR 30 226 -36 1701 144 7 18 chr17 34227338 34227650 -55276903 + AluJb SINE Alu 1 309 0 293 262 12 12 chr17 34227716 34227800 -55276753 + MIR SINE MIR 53 136 -72 21 0 0 0 chr17 34227860 34227881 -55276672 + AT_rich Low_complexity Low_complexity 1 21 0 1843 164 67 15 chr17 34228747 34229150 -55275403 + L1MB8 LINE L1 5754 6177 -1 2205 100 6 3 chr17 34229731 34230042 -55274511 - AluSx SINE Alu 0 312 1 183 100 0 0 chr17 34230238 34230268 -55274285 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 599 304 145 19 chr17 34230434 34230953 -55273600 + L2 LINE L2 2712 3313 0 243 245 0 0 chr17 34231754 34231807 -55272746 + (CA)n Simple_repeat Simple_repeat 1 53 0 210 91 0 0 chr17 34232604 34232637 -55271916 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 244 242 16 0 chr17 34233252 34233314 -55271239 + L1MB5 LINE L1 5711 5773 -586 950 198 62 5 chr17 34233344 34233536 -55271017 + MIR SINE MIR 58 260 -2 273 339 91 0 chr17 34234314 34234479 -55270074 - MER115 DNA AcHobo -475 218 39 192 315 74 0 chr17 34234933 34234987 -55269566 - L2 LINE L2 -5 3267 3210 1501 202 17 38 chr17 34235046 34235392 -55269161 + MLT1A2 LTR MaLR 5 343 -31 318 26 0 0 chr17 34235401 34235440 -55269113 + (GTATG)n Simple_repeat Simple_repeat 3 41 0 250 267 0 89 chr17 34235943 34236044 -55268509 + L2 LINE L2 3222 3313 0 1105 164 44 103 chr17 34236127 34236468 -55268085 - MER33 DNA MER1_type 0 324 4 972 278 13 0 chr17 34236982 34237216 -55267337 - MIR SINE MIR -21 241 5 803 184 6 25 chr17 34237524 34237687 -55266866 + L1MB5 LINE L1 6015 6174 0 200 194 0 0 chr17 34238624 34238660 -55265893 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 299 257 55 37 chr17 34239064 34239173 -55265380 + MIR3 SINE MIR 78 188 -20 * 483 268 105 52 chr17 34239170 34239323 -55265230 + L3 LINE CR1 1414 1574 -3 294 290 51 56 chr17 34239818 34239991 -55264562 + MIR SINE MIR 3 172 -62 1191 244 56 95 chr17 34240550 34240847 -55263706 - L2 LINE L2 0 3313 3006 2026 79 4 0 chr17 34240847 34241113 -55263440 - AluSg SINE Alu -18 292 26 1541 140 0 0 chr17 34241119 34241369 -55263184 - AluSx SINE Alu 0 309 60 1191 244 56 95 chr17 34241369 34241766 -55262787 - L2 LINE L2 -312 3001 2623 248 266 137 24 chr17 34242129 34242253 -55262300 + MIR SINE MIR 123 260 -2 327 292 80 0 chr17 34242405 34242518 -55262035 - MIR SINE MIR -67 195 74 1827 95 73 4 chr17 34242518 34242792 -55261761 + AluSp SINE Alu 1 293 -20 1244 181 128 105 chr17 34243149 34243509 -55261044 - MLT1C LTR MaLR -10 457 84 1616 177 20 7 chr17 34243509 34243808 -55260745 + AluJo SINE Alu 1 303 -9 1244 181 128 105 chr17 34243808 34243894 -55260659 - MLT1C LTR MaLR -383 84 1 763 115 8 217 chr17 34243899 34244036 -55260517 - MLT1C-int LTR MaLR -5 1366 1300 2091 107 0 7 chr17 34244036 34244316 -55260237 + AluSc SINE Alu 22 299 -10 763 115 8 217 chr17 34244316 34244422 -55260131 - MLT1C-int LTR MaLR -71 1300 1174 1871 175 27 30 chr17 34245239 34245605 -55258948 + MLT1A1 LTR MaLR 1 365 0 240 130 0 0 chr17 34246324 34246370 -55258183 + (TG)n Simple_repeat Simple_repeat 2 47 0 288 0 0 0 chr17 34246591 34246623 -55257930 + (TG)n Simple_repeat Simple_repeat 1 32 0 470 279 146 31 chr17 34246965 34247219 -55257334 + Charlie2 DNA MER1_type 25 307 -2555 750 213 33 5 chr17 34247362 34247573 -55256980 + Charlie2a DNA MER1_type 1465 1681 -1181 252 319 88 11 chr17 34247709 34247800 -55256753 + MIR3 SINE MIR 75 172 -36 363 280 16 24 chr17 34248579 34248704 -55255849 + LTR67 LTR ERVL 432 555 -2 747 112 22 0 chr17 34248704 34248838 -55255715 + (TCCA)n Simple_repeat Simple_repeat 4 140 0 484 294 85 14 chr17 34249081 34249320 -55255233 - MIR SINE MIR -7 255 3 418 263 79 0 chr17 34249334 34249448 -55255105 + MIR3 SINE MIR 83 205 -3 326 331 72 50 chr17 34249532 34249713 -55254840 - L1MEd LINE L1 -5510 609 425 1067 103 0 6 chr17 34250013 34250187 -55254366 + (TTCC)n Simple_repeat Simple_repeat 3 175 0 241 319 36 72 chr17 34250739 34250905 -55253648 + L2 LINE L2 2600 2759 -555 482 358 144 5 chr17 34251243 34251458 -55253095 - MIR SINE MIR -14 248 4 2135 305 48 36 chr17 34251515 34252834 -55251719 + L2 LINE L2 1972 3311 -2 529 178 0 22 chr17 34252992 34253127 -55251426 + (CAT)n Simple_repeat Simple_repeat 3 134 0 366 275 73 39 chr17 34253135 34253313 -55251240 - MIR SINE MIR 0 262 79 535 192 96 0 chr17 34254063 34254167 -55250386 - MIR SINE MIR -66 196 83 441 293 75 42 chr17 34254293 34254505 -55250048 - MIR SINE MIR -10 252 34 316 271 47 23 chr17 34254510 34254639 -55249914 + MIR SINE MIR 75 206 -56 359 290 65 32 chr17 34254703 34254827 -55249726 - MIR SINE MIR -59 149 22 489 260 8 39 chr17 34255030 34255157 -55249396 + MER5B DNA MER1_type 50 172 -6 292 264 163 47 chr17 34255172 34255301 -55249252 - MIR3 SINE MIR -59 149 6 300 309 0 0 chr17 34255929 34256013 -55248540 + MIR SINE MIR 35 118 -90 184 244 0 0 chr17 34256215 34256260 -55248293 - L2 LINE L2 -303 2969 2925 324 259 12 12 chr17 34256529 34256610 -55247943 + L2 LINE L2 3191 3271 -1 277 253 10 30 chr17 34256630 34256729 -55247824 + (TGAA)n Simple_repeat Simple_repeat 3 99 0 382 267 200 67 chr17 34257391 34257541 -55247012 + MER5A DNA MER1_type 14 183 -6 210 333 0 0 chr17 34257633 34257687 -55246866 - L2 LINE L2 -257 3056 3003 441 222 114 30 chr17 34257723 34257886 -55246667 + MIR SINE MIR 14 184 -67 420 339 38 35 chr17 34258406 34258695 -55245858 + L2 LINE L2 2904 3193 -120 812 153 174 0 chr17 34258765 34258909 -55245644 + FRAM SINE Alu 1 162 -14 209 280 31 10 chr17 34258909 34258998 -55245555 - MER5A DNA MER1_type -60 129 26 222 37 0 0 chr17 34259125 34259152 -55245401 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 287 320 49 25 chr17 34259204 34259326 -55245227 - L2 LINE L2 -8 3264 3140 812 214 7 0 chr17 34260011 34260165 -55244388 + AluJo SINE Alu 1 155 -157 375 225 180 0 chr17 34260231 34260342 -55244211 + MIR SINE MIR 105 235 -27 245 249 21 107 chr17 34261512 34261662 -55242891 + MIR SINE MIR 55 191 -71 248 169 17 51 chr17 34262173 34262232 -55242321 + MIR3 SINE MIR 115 171 -37 * 295 336 0 48 chr17 34262207 34262332 -55242221 - MIR3 SINE MIR -75 133 15 1453 178 22 70 chr17 34262568 34262851 -55241702 - MLT1D LTR MaLR -2 503 208 375 60 0 0 chr17 34262851 34262901 -55241652 + (TG)n Simple_repeat Simple_repeat 1 50 0 1453 178 22 70 chr17 34262901 34262915 -55241638 - MLT1D LTR MaLR -297 208 195 2019 117 4 0 chr17 34262915 34263179 -55241374 - AluSq SINE Alu -48 265 1 1453 178 22 70 chr17 34263179 34263427 -55241126 - MLT1D LTR MaLR -310 195 5 624 183 32 32 chr17 34263719 34263845 -55240708 + MER5A DNA MER1_type 8 133 -56 266 283 35 71 chr17 34264027 34264140 -55240413 + MIR3 SINE MIR 5 113 -95 379 268 105 7 chr17 34264346 34264499 -55240054 + MIR SINE MIR 84 251 -11 194 209 0 0 chr17 34264465 34264508 -55240045 + L2 LINE L2 3222 3264 -8 * 368 269 120 23 chr17 34265041 34265170 -55239383 + MIR SINE MIR 2 139 -69 203 184 105 0 chr17 34265382 34265420 -55239133 + L2 LINE L2 3221 3262 -10 465 346 56 19 chr17 34266080 34266294 -55238259 + MIR SINE MIR 24 245 -17 394 235 0 0 chr17 34266348 34266429 -55238124 - MIR SINE MIR -3 259 179 681 330 80 42 chr17 34266875 34267327 -55237226 + L2 LINE L2 2804 3272 0 235 278 173 28 chr17 34267529 34267730 -55236823 - MIR SINE MIR -16 246 1 325 306 99 63 chr17 34268838 34269060 -55235493 - L2 LINE L2 -463 2851 2622 405 0 0 0 chr17 34269120 34269165 -55235388 + (CA)n Simple_repeat Simple_repeat 2 46 0 688 229 51 25 chr17 34269170 34269327 -55235226 - MIR SINE MIR -94 168 8 206 291 146 0 chr17 34270022 34270132 -55234421 + MIR SINE MIR 63 188 -74 180 0 0 0 chr17 34271366 34271386 -55233167 + (T)n Simple_repeat Simple_repeat 1 20 0 27 49 0 0 chr17 34272528 34272569 -55231984 + GC_rich Low_complexity Low_complexity 1 41 0 192 125 0 0 chr17 34272586 34272618 -55231935 + (CAG)n Simple_repeat Simple_repeat 3 34 0 34 42 0 0 chr17 34272676 34272724 -55231829 + GC_rich Low_complexity Low_complexity 1 48 0 31 26 0 0 chr17 34273687 34273725 -55230828 + GC_rich Low_complexity Low_complexity 1 38 0 270 248 31 37 chr17 34274208 34274369 -55230184 + (TG)n Simple_repeat Simple_repeat 2 161 0 398 192 11 50 chr17 34274976 34275158 -55229395 + (CATA)n Simple_repeat Simple_repeat 4 178 0 458 294 61 92 chr17 34275846 34276108 -55228445 + L2 LINE L2 2982 3235 -37 215 261 0 0 chr17 34276147 34276193 -55228360 - L2 LINE L2 -16 3297 3252 766 144 16 8 chr17 34276263 34276388 -55228165 - FLAM_C SINE Alu -6 127 2 560 242 72 87 chr17 34276509 34276773 -55227780 - MIR SINE MIR -1 261 2 207 0 0 0 chr17 34277072 34277095 -55227458 + (CCA)n Simple_repeat Simple_repeat 3 25 0 586 238 153 127 chr17 34277254 34277633 -55226920 - L3 LINE CR1 -10 1567 1179 1852 156 11 7 chr17 34277947 34278275 -55226278 + AluJb SINE Alu 1 329 0 228 343 15 15 chr17 34278338 34278472 -55226081 + CT-rich Low_complexity Low_complexity 1 134 0 5725 46 26 0 chr17 34278521 34279217 -55225336 - L1PA5 LINE L1 0 6154 5441 3554 45 2 0 chr17 34279217 34279680 -55224873 + L1P LINE L1 4363 4826 -1320 382 301 70 21 chr17 34280275 34280418 -55224135 - MIR3 SINE MIR -48 160 11 228 286 184 0 chr17 34281134 34281232 -55223321 - MIR3 SINE MIR -7 201 86 230 239 104 0 chr17 34281276 34281343 -55223210 - MIR SINE MIR -2 260 187 294 29 0 0 chr17 34281346 34281381 -55223172 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1664 164 0 42 chr17 34281398 34281684 -55222869 - AluJb SINE Alu -38 274 1 513 246 169 0 chr17 34281688 34281830 -55222723 - MIR SINE MIR -66 196 31 263 364 91 0 chr17 34281886 34282062 -55222491 - L2 LINE L2 -18 3295 3104 206 200 0 0 chr17 34283107 34283142 -55221411 + G-rich Low_complexity Low_complexity 3 37 0 284 297 148 0 chr17 34283166 34283267 -55221286 - MIR SINE MIR -30 232 117 442 213 41 57 chr17 34283381 34283503 -55221050 - MIR SINE MIR -109 153 34 249 228 21 28 chr17 34283936 34284081 -55220472 + CT-rich Low_complexity Low_complexity 2 145 0 376 237 47 89 chr17 34284276 34284466 -55220087 + L1ME LINE L1 5601 5782 -339 402 272 52 20 chr17 34286249 34286460 -55218093 - MIR SINE MIR -12 250 32 2505 44 14 0 chr17 34287341 34287634 -55216919 + AluY SINE Alu 1 297 -14 447 259 144 0 chr17 34287746 34287885 -55216668 - MIR SINE MIR -75 187 29 472 272 37 6 chr17 34288563 34288725 -55215828 - MER113 DNA MER1_type? -346 175 9 317 182 52 0 chr17 34289057 34289134 -55215419 - L1MC5 LINE L1 -36 7925 7845 519 224 8 0 chr17 34289175 34289293 -55215260 + MIR SINE MIR 32 149 -73 365 331 114 17 chr17 34290172 34290347 -55214206 + MIR3 SINE MIR 15 206 -2 458 266 209 42 chr17 34290705 34291211 -55213342 - L2 LINE L2 -1 3312 2892 769 153 22 51 chr17 34291211 34291348 -55213205 + FLAM_C SINE Alu 1 133 0 458 266 209 42 chr17 34291348 34291644 -55212909 - L2 LINE L2 -421 2892 2380 377 291 69 32 chr17 34292005 34292209 -55212344 - MIR SINE MIR -42 220 3 3139 246 51 59 chr17 34293094 34293781 -55210772 - L2 LINE L2 -2 3311 2640 1613 244 66 21 chr17 34293781 34294264 -55210289 - MLT1D LTR MaLR 0 505 1 3139 246 51 59 chr17 34294264 34294895 -55209658 - L2 LINE L2 -673 2640 2005 576 207 97 89 chr17 34295298 34295526 -55209027 + MIR SINE MIR 16 259 -3 282 278 26 70 chr17 34295817 34295932 -55208621 + MIR3 SINE MIR 51 160 -48 645 254 32 91 chr17 34296590 34296640 -55207913 - MIR SINE MIR -6 256 205 1663 174 7 0 chr17 34296640 34296927 -55207626 - AluJo SINE Alu -17 295 7 645 254 32 91 chr17 34296927 34297128 -55207425 - MIR SINE MIR -57 205 20 378 292 39 58 chr17 34297242 34297396 -55207157 - MIR SINE MIR -54 208 58 554 298 86 25 chr17 34298326 34298524 -55206029 - MIR SINE MIR -6 256 47 364 327 65 39 chr17 34299810 34299963 -55204590 + L2 LINE L2 2899 3055 -217 510 249 98 46 chr17 34300030 34300315 -55204238 + L1ME4a LINE L1 5820 6119 -2 2190 113 0 13 chr17 34300334 34300645 -55203908 - AluSx SINE Alu -5 307 1 340 212 8 91 chr17 34301150 34301282 -55203271 - L1MC4 LINE L1 0 8042 7922 404 337 149 19 chr17 34301411 34301672 -55202881 + L1MC4a LINE L1 5643 5937 -1871 1990 103 3 36 chr17 34301845 34302147 -55202406 + AluSx SINE Alu 1 292 -20 301 274 89 22 chr17 34302400 34302535 -55202018 + Charlie8 DNA MER1_type 84 227 -2190 438 331 0 7 chr17 34302754 34302890 -55201663 - MIR SINE MIR -58 150 16 682 300 17 35 chr17 34303115 34303345 -55201208 + MIR SINE MIR 33 258 -4 192 290 110 10 chr17 34303330 34303430 -55201123 - MIR SINE MIR -2 260 151 * 940 305 29 61 chr17 34303502 34304026 -55200527 - L2 LINE L2 -2 3311 2805 608 279 0 14 chr17 34304032 34304179 -55200374 - MIR SINE MIR -116 146 2 725 238 41 6 chr17 34305069 34305241 -55199312 - MER5A DNA MER1_type -3 186 9 1004 165 0 6 chr17 34305294 34305458 -55199095 + FRAM SINE Alu 1 159 -17 189 253 391 0 chr17 34306655 34306742 -55197811 - L2 LINE L2 -12 3260 3140 635 232 147 17 chr17 34306927 34307104 -55197449 - MIR SINE MIR -47 215 16 644 161 22 28 chr17 34307619 34307799 -55196754 + GA-rich Low_complexity Low_complexity 2 180 0 252 318 88 55 chr17 34307923 34308140 -55196413 - L2 LINE L2 -6 3307 3084 237 317 24 0 chr17 34308371 34308453 -55196100 + L2 LINE L2 3149 3232 -40 376 298 113 0 chr17 34309236 34309407 -55195146 + MIR SINE MIR 1 191 -68 187 222 0 0 chr17 34309518 34309554 -55194999 + L2 LINE L2 3251 3286 -27 941 275 21 12 chr17 34309613 34309853 -55194700 - MIR SINE MIR -17 245 4 250 310 35 35 chr17 34309947 34310060 -55194493 + MIR SINE MIR 29 141 -67 228 356 67 0 chr17 34310386 34310521 -55194032 + L2 LINE L2 2853 2996 -276 2438 66 16 3 chr17 34310537 34310857 -55193696 + L1PA10 LINE L1 5717 6040 -128 411 319 125 44 chr17 34312308 34312603 -55191950 + L2 LINE L2 2443 2761 -553 1821 158 6 10 chr17 34313021 34313404 -55191149 - AluSx SINE Alu 0 382 1 717 253 48 16 chr17 34313494 34313680 -55190873 + MIR SINE MIR 65 256 -6 377 324 27 0 chr17 34313803 34313914 -55190639 + L2 LINE L2 3182 3295 -18 187 268 0 84 chr17 34314341 34314412 -55190141 + L2 LINE L2 3249 3313 0 203 289 0 19 chr17 34314939 34314991 -55189562 + polypyrimidine Low_complexity Low_complexity 2 52 0 212 289 67 0 chr17 34315280 34315370 -55189183 + L2 LINE L2 2311 2406 -908 182 325 133 50 chr17 34315566 34315686 -55188867 + L2 LINE L2 3134 3263 -9 454 271 110 13 chr17 34316018 34316173 -55188380 + MIR3 SINE MIR 3 172 -36 270 250 11 0 chr17 34316606 34316694 -55187859 + (TA)n Simple_repeat Simple_repeat 1 89 0 478 320 102 31 chr17 34316928 34317153 -55187400 - MIR SINE MIR -18 244 4 411 130 0 0 chr17 34317186 34317263 -55187290 + (TG)n Simple_repeat Simple_repeat 2 78 0 461 291 40 72 chr17 34317841 34318064 -55186489 + MIR SINE MIR 47 262 0 1977 126 0 3 chr17 34318448 34318734 -55185819 + AluSp SINE Alu 1 285 -28 1535 176 0 61 chr17 34318821 34319151 -55185402 + AluJo SINE Alu 1 310 -2 190 366 23 23 chr17 34319856 34319987 -55184566 + MIR SINE MIR 2 132 -130 21 0 0 0 chr17 34320464 34320485 -55184068 + AT_rich Low_complexity Low_complexity 1 21 0 474 306 27 60 chr17 34320775 34321008 -55183545 + MIR SINE MIR 9 245 -17 692 317 33 25 chr17 34321630 34321873 -55182680 + MIR SINE MIR 10 254 -8 275 345 17 8 chr17 34321990 34322109 -55182444 + L2 LINE L2 2667 2786 -528 1101 107 0 0 chr17 34322234 34322383 -55182170 - AluSq/x SINE Alu -164 149 1 315 325 30 93 chr17 34323408 34323645 -55180908 - L2 LINE L2 -41 3231 3010 378 0 0 0 chr17 34323682 34323724 -55180829 + (TG)n Simple_repeat Simple_repeat 2 43 0 1409 143 143 0 chr17 34324792 34325036 -55179517 + AluSx SINE Alu 15 293 -19 1084 104 0 0 chr17 34325299 34325453 -55179100 - L1MA3 LINE L1 0 6305 6152 1127 155 0 0 chr17 34325455 34325629 -55178924 - AluJb SINE Alu -138 174 1 527 125 0 11 chr17 34325633 34325721 -55178832 - L1MA3 LINE L1 -165 6140 6054 299 307 35 9 chr17 34326222 34326336 -55178217 - MIR3 SINE MIR -45 163 47 873 262 61 0 chr17 34326709 34326938 -55177615 - L1ME3 LINE L1 -330 5832 5590 242 229 0 0 chr17 34326962 34327010 -55177543 + L2 LINE L2 3221 3268 -4 194 292 0 0 chr17 34327009 34327057 -55177496 - L3 LINE CR1 -715 862 815 * 449 271 83 14 chr17 34327112 34327256 -55177297 - MIR3 SINE MIR -11 197 44 21 0 0 0 chr17 34327387 34327408 -55177145 + AT_rich Low_complexity Low_complexity 1 21 0 249 33 0 0 chr17 34328353 34328383 -55176170 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 333 312 52 82 chr17 34328384 34328615 -55175938 - L2 LINE L2 -19 3253 3030 2446 224 32 76 chr17 34328856 34329230 -55175323 + L1ME3A LINE L1 5517 5849 -321 2042 97 4 4 chr17 34329230 34329509 -55175044 + AluSx SINE Alu 4 282 -30 2446 224 32 76 chr17 34329509 34329818 -55174735 + L1ME3A LINE L1 5849 6170 0 231 211 88 0 chr17 34330130 34330187 -55174366 + MIR SINE MIR 92 153 -109 639 329 85 65 chr17 34330858 34330917 -55173636 - L2 LINE L2 -6 3266 3210 234 0 0 0 chr17 34330917 34330943 -55173610 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 639 329 85 65 chr17 34330943 34331785 -55172768 - L2 LINE L2 -62 3210 2349 356 254 0 0 chr17 34331808 34331879 -55172674 - MIR SINE MIR -61 147 77 244 275 102 69 chr17 34331971 34332159 -55172394 - MIR SINE MIR -56 206 20 578 242 89 6 chr17 34332214 34332371 -55172182 + MIR SINE MIR 76 245 -17 245 310 133 9 chr17 34333314 34333427 -55171126 - L2 LINE L2 -29 3284 3158 1686 228 68 20 chr17 34333514 34333952 -55170601 + MLT1C LTR MaLR 1 459 -8 379 306 50 58 chr17 34334876 34335122 -55169431 + MIR3 SINE MIR 2 260 -2 255 297 14 0 chr17 34335255 34335329 -55169224 - MIR3 SINE MIR -47 161 87 208 285 46 106 chr17 34335455 34335606 -55168947 + MIR SINE MIR 52 193 -69 222 312 29 80 chr17 34335792 34335930 -55168623 + MIR3 SINE MIR 42 172 -36 359 279 81 50 chr17 34336267 34336428 -55168125 - MIR SINE MIR -77 185 20 281 310 110 28 chr17 34336561 34336706 -55167847 - MIR3 SINE MIR -5 203 47 * 334 260 32 84 chr17 34336700 34336753 -55167800 - MIR SINE MIR -36 226 172 2063 143 43 18 chr17 34336753 34337082 -55167471 + MER1B DNA MER1_type 1 337 0 334 260 32 84 chr17 34337082 34337182 -55167371 - MIR SINE MIR -90 172 81 606 296 101 5 chr17 34337466 34337665 -55166888 - MIR SINE MIR 0 262 45 562 314 6 23 chr17 34337685 34337860 -55166693 + MER5B DNA MER1_type 7 178 0 1375 212 5 19 chr17 34338014 34338351 -55166202 - MER33 DNA MER1_type 0 324 1 2206 116 0 0 chr17 34338397 34338707 -55165846 + AluSx SINE Alu 1 310 -2 723 282 166 15 chr17 34338973 34339448 -55165105 + L1ME4a LINE L1 5564 6110 -11 491 273 99 6 chr17 34340028 34340189 -55164364 - MIR SINE MIR -86 176 1 341 300 101 46 chr17 34341098 34341335 -55163218 - MIR SINE MIR 0 262 13 245 292 56 0 chr17 34341582 34341654 -55162899 - L2 LINE L2 -47 3225 3150 1075 215 18 4 chr17 34342059 34342287 -55162266 - MER96B DNA MER1_type? -186 231 1 398 320 61 7 chr17 34342307 34342454 -55162099 - MIR SINE MIR -19 243 89 238 296 0 10 chr17 34342971 34343053 -55161500 + MIR SINE MIR 3 80 -135 478 273 180 21 chr17 34343054 34343248 -55161305 - MIR SINE MIR -15 247 23 438 283 55 7 chr17 34343226 34343371 -55161182 + MIR SINE MIR 46 197 -65 * 248 214 36 36 chr17 34343369 34343425 -55161128 - L2 LINE L2 -4 3268 3213 * 277 240 217 8 chr17 34344207 34344336 -55160217 - L2 LINE L2 -212 3060 2905 625 175 34 160 chr17 34344371 34344564 -55159989 + MER106A DNA MER1_type 1 217 -19 1725 176 35 3 chr17 34344564 34344883 -55159670 + L1MB2 LINE L1 5840 6168 -3 761 158 13 8 chr17 34344753 34344895 -55159658 + L1MB2 LINE L1 6038 6184 0 625 175 34 160 chr17 34344883 34344957 -55159596 + MER106A DNA MER1_type 217 234 -2 * 800 202 150 0 chr17 34345088 34345281 -55159272 - MER58A DNA MER1_type -2 222 1 189 300 0 0 chr17 34346098 34346158 -55158395 + MIR SINE MIR 94 153 -109 248 269 0 0 chr17 34346228 34346280 -55158273 + L2 LINE L2 3205 3256 -16 581 224 125 0 chr17 34346611 34346763 -55157790 - MER96 DNA MER1_type -4 171 1 476 239 10 81 chr17 34346909 34347106 -55157447 - MER5A DNA MER1_type 0 189 7 303 192 0 0 chr17 34347120 34347172 -55157381 + MER94 DNA DNA 1 52 -82 1032 194 6 0 chr17 34347213 34347388 -55157165 + MER58A DNA MER1_type 47 222 -2 366 123 0 0 chr17 34348092 34348149 -55156404 + (TG)n Simple_repeat Simple_repeat 1 57 0 222 348 25 0 chr17 34348163 34348281 -55156272 + (TG)n Simple_repeat Simple_repeat 2 122 0 260 314 78 93 chr17 34349669 34350013 -55154540 + L2 LINE L2 2928 3266 -6 443 338 19 0 chr17 34350270 34350427 -55154126 + MIR SINE MIR 38 197 -65 400 324 34 14 chr17 34351046 34351194 -55153359 - L2 LINE L2 -3 3310 3160 513 236 40 29 chr17 34351552 34351726 -55152827 - L2 LINE L2 -586 2728 2553 2135 139 0 3 chr17 34351728 34352037 -55152516 + AluSx SINE Alu 1 308 -4 1211 294 253 38 chr17 34352358 34353603 -55150950 - L2 LINE L2 -948 2366 1391 1989 140 7 0 chr17 34353603 34353901 -55150652 + AluSx SINE Alu 2 301 0 1211 294 253 38 chr17 34353901 34354477 -55150076 - L2 LINE L2 -1923 1391 151 367 253 21 0 chr17 34354775 34354870 -55149683 - MER5A DNA MER1_type -84 105 9 902 264 52 8 chr17 34354876 34355126 -55149427 - Charlie8 DNA MER1_type -2156 261 1 2141 107 0 7 chr17 34356180 34356461 -55148092 + AluSx SINE Alu 1 279 -33 585 42 0 0 chr17 34356461 34356533 -55148020 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 348 291 17 8 chr17 34356911 34357028 -55147525 + MIR SINE MIR 73 190 -72 275 315 119 13 chr17 34357831 34358066 -55146487 + L2 LINE L2 2101 2360 -954 187 278 0 19 chr17 34358303 34358357 -55146196 + MIR3 SINE MIR 133 185 -23 242 214 214 27 chr17 34358830 34358942 -55145611 + L2 LINE L2 3137 3269 -3 1818 172 13 17 chr17 34359154 34359456 -55145097 - AluJb SINE Alu -11 301 1 2480 117 20 6 chr17 34359704 34360062 -55144491 - THE1B LTR MaLR -1 363 1 192 302 226 34 chr17 34360129 34360483 -55144070 + L2 LINE L2 2556 2977 -337 1664 130 13 8 chr17 34360924 34361162 -55143391 + AluSx SINE Alu 56 294 -18 607 282 79 59 chr17 34361586 34361926 -55142627 - L2 LINE L2 0 3272 2926 212 325 108 48 chr17 34362032 34362198 -55142355 - MIR SINE MIR -38 224 49 236 163 0 0 chr17 34362813 34362856 -55141697 - MER5A DNA MER1_type 0 189 147 * 276 196 0 18 chr17 34362838 34362894 -55141659 + MER5A DNA MER1_type 100 154 -35 194 265 265 0 chr17 34363128 34363211 -55141342 - MIR SINE MIR -63 145 41 521 245 48 37 chr17 34363301 34363489 -55141064 + MLT1J2 LTR MaLR 11 200 -250 278 295 107 40 chr17 34363529 34363678 -55140875 + MLT1J2 LTR MaLR 290 448 -2 555 316 23 6 chr17 34363686 34363863 -55140690 + MER5A DNA MER1_type 7 186 -3 848 208 187 4 chr17 34363878 34364162 -55140391 + MER58 DNA MER1_type 3 2416 -4 243 200 88 125 chr17 34364700 34364860 -55139693 + MLT1J LTR MaLR 100 253 -258 914 237 48 99 chr17 34365434 34365848 -55138705 + MLT1J LTR MaLR 119 511 0 303 267 0 17 chr17 34366031 34366147 -55138406 - MER113 DNA MER1_type? -397 124 11 257 232 171 0 chr17 34366173 34366255 -55138298 + L2 LINE L2 3175 3270 -2 281 314 88 0 chr17 34367462 34367564 -55136989 - MIR SINE MIR -62 146 36 268 311 78 0 chr17 34368499 34368602 -55135951 + L2 LINE L2 3145 3255 -17 237 254 0 0 chr17 34369112 34369171 -55135382 - MIR SINE MIR -109 153 95 266 289 133 0 chr17 34370069 34370152 -55134401 + MIR3 SINE MIR 72 165 -43 1017 196 14 37 chr17 34370168 34370382 -55134171 + MER2 DNA MER2_type 2 210 -135 22 35 0 0 chr17 34370393 34370422 -55134131 + AT_rich Low_complexity Low_complexity 1 29 0 224 154 19 0 chr17 34370645 34370697 -55133856 + GA-rich Low_complexity Low_complexity 2 54 0 294 29 0 0 chr17 34372173 34372208 -55132345 + (TA)n Simple_repeat Simple_repeat 1 35 0 288 0 0 0 chr17 34372213 34372245 -55132308 + (TG)n Simple_repeat Simple_repeat 2 33 0 185 91 0 30 chr17 34372676 34372709 -55131844 + (TATATG)n Simple_repeat Simple_repeat 3 34 0 333 277 18 0 chr17 34372711 34372823 -55131730 - L1MC3 LINE L1 -1929 5856 5743 354 249 47 35 chr17 34373048 34373217 -55131336 + MIR3 SINE MIR 37 207 -1 347 315 235 7 chr17 34373278 34373567 -55130986 - L2 LINE L2 -20 3252 2898 436 301 39 0 chr17 34374320 34374473 -55130080 - MIR3 SINE MIR -2 206 48 1273 233 18 21 chr17 34374645 34374984 -55129569 + L1MB7 LINE L1 4604 4941 -1205 1149 211 110 36 chr17 34375064 34375449 -55129104 - MER39 LTR ERV1 -87 620 1 3695 209 52 42 chr17 34375449 34375706 -55128847 + L1MB7 LINE L1 4938 5191 -993 1704 180 20 23 chr17 34375706 34376012 -55128541 + AluJo SINE Alu 7 311 -1 3695 209 52 42 chr17 34376012 34376978 -55127575 + L1MB7 LINE L1 5191 6184 0 1916 149 24 3 chr17 34377826 34378121 -55126432 + AluJo SINE Alu 1 301 -11 316 228 43 169 chr17 34378162 34378346 -55126207 - LTR67 LTR ERVL -368 189 29 1932 119 48 10 chr17 34379156 34379449 -55125104 - AluSx SINE Alu -7 305 2 278 258 78 24 chr17 34379549 34379674 -55124879 - MLT1I LTR MaLR -26 406 285 1965 153 0 3 chr17 34379772 34380072 -55124481 - AluSx SINE Alu -13 299 1 329 259 52 43 chr17 34380102 34380218 -55124335 - MLT1J1 LTR MaLR -294 152 36 2130 119 0 26 chr17 34380842 34381144 -55123409 + AluSx SINE Alu 1 294 -18 1174 238 125 66 chr17 34381234 34381792 -55122761 - MLT1E LTR MaLR -2 591 1 373 275 67 13 chr17 34381921 34382070 -55122483 - MIR3 SINE MIR -11 197 41 196 326 41 20 chr17 34382314 34382412 -55122141 + L2 LINE L2 2119 2218 -1096 501 292 106 4 chr17 34382576 34382802 -55121751 - MIR SINE MIR -6 256 8 660 26 0 0 chr17 34382975 34383053 -55121500 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 1794 169 7 13 chr17 34383074 34383376 -55121177 - AluSx SINE Alu -12 300 1 358 279 108 25 chr17 34384324 34384482 -55120071 + MIR SINE MIR 33 203 -59 608 304 45 12 chr17 34384661 34384919 -55119634 + MIR SINE MIR 1 261 -1 585 210 60 30 chr17 34385151 34385318 -55119235 - MER5B DNA MER1_type -5 173 2 357 150 0 14 chr17 34385430 34385541 -55119012 + MER96 DNA MER1_type? 1 164 -11 686 198 6 0 chr17 34385711 34385888 -55118665 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 606 196 6 22 chr17 34385909 34386052 -55118501 + (TCCA)n Simple_repeat Simple_repeat 1 142 -34 2061 122 82 20 chr17 34386052 34386395 -55118158 - THE1B LTR MaLR 0 364 1 606 196 6 22 chr17 34386395 34386430 -55118123 + (TCCA)n Simple_repeat Simple_repeat 142 176 0 230 246 14 29 chr17 34386449 34386518 -55118035 - L2 LINE L2 -1 3312 3245 393 273 74 0 chr17 34386905 34387026 -55117527 - MIR3 SINE MIR -1 207 78 490 304 70 43 chr17 34387171 34387415 -55117138 - MIR SINE MIR -11 251 3 230 309 0 0 chr17 34388111 34388179 -55116374 + L2 LINE L2 3200 3267 -5 634 231 14 83 chr17 34388803 34389019 -55115534 + L2 LINE L2 3113 3313 0 599 216 6 0 chr17 34389179 34389341 -55115212 + (ATG)n Simple_repeat Simple_repeat 3 165 0 263 315 41 48 chr17 34389406 34389552 -55115001 - MIR SINE MIR -74 188 45 1001 272 44 26 chr17 34391641 34391983 -55112570 - MLT1I LTR MaLR -52 357 10 4227 98 12 2 chr17 34392980 34393572 -55110981 - L1PA10 LINE L1 0 6168 5571 1128 83 0 0 chr17 34393572 34393716 -55110837 + L1PA10 LINE L1 5403 5546 -622 369 279 113 6 chr17 34394454 34394617 -55109936 - MIR3 SINE MIR -2 206 25 920 194 55 26 chr17 34394817 34395059 -55109494 + L1MB8 LINE L1 5932 6178 0 1827 193 68 68 chr17 34396043 34396159 -55108394 + MER74B LTR ERVL 56 171 -451 2333 87 0 0 chr17 34396159 34396482 -55108071 - AluSg SINE Alu 0 323 1 1827 193 68 68 chr17 34396482 34396869 -55107684 + MER74B LTR ERVL 170 572 -50 843 276 13 13 chr17 34397165 34397390 -55107163 + MIR SINE MIR 17 241 -21 297 298 122 12 chr17 34397777 34397953 -55106600 + MIR SINE MIR 2 197 -65 410 275 11 6 chr17 34398034 34398148 -55106405 - MIR SINE MIR -93 115 3 25 0 0 0 chr17 34398427 34398452 -55106101 + AT_rich Low_complexity Low_complexity 1 25 0 1724 167 0 3 chr17 34399740 34400028 -55104525 + AluSx SINE Alu 1 287 -25 236 159 48 79 chr17 34401717 34401780 -55102773 + L2 LINE L2 3253 3313 0 324 269 35 14 chr17 34401784 34401929 -55102624 + (TGAA)n Simple_repeat Simple_repeat 3 150 0 325 246 18 143 chr17 34402470 34402685 -55101868 + MIR SINE MIR 5 196 -66 292 71 36 0 chr17 34402825 34402881 -55101672 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 509 271 88 11 chr17 34403214 34403395 -55101158 - MIR SINE MIR -31 231 37 418 308 8 0 chr17 34404227 34404360 -55100193 + L2 LINE L2 2509 2642 -672 228 286 116 103 chr17 34404383 34404753 -55099800 + L2 LINE L2 2819 3193 -79 468 265 74 0 chr17 34404762 34404924 -55099629 - MER96 DNA MER1_type -1 174 1 465 278 94 37 chr17 34405722 34405913 -55098640 - L3 LINE CR1 -187 1390 1189 480 35 0 0 chr17 34406361 34406419 -55098134 + (TG)n Simple_repeat Simple_repeat 1 58 0 3136 55 5 0 chr17 34406715 34407112 -55097441 - L1P LINE L1 -999 5147 4749 2696 75 3 3 chr17 34407112 34407454 -55097099 + L1PA7 LINE L1 5805 6153 -1 654 315 69 17 chr17 34407907 34408386 -55096167 + L1MC4a LINE L1 5564 6067 -1741 247 393 52 30 chr17 34408517 34408652 -55095901 - L2 LINE L2 -6 3266 3129 538 273 67 0 chr17 34409025 34409175 -55095378 + MER63A DNA MER1_type 48 207 -3 382 247 62 79 chr17 34409673 34409851 -55094702 + MIR3 SINE MIR 34 208 0 184 291 55 129 chr17 34410175 34410595 -55093958 + L2 LINE L2 2804 3192 -80 262 351 0 0 chr17 34411036 34411130 -55093423 + LTR16A LTR ERVL 329 422 -28 586 300 69 6 chr17 34411468 34411628 -55092925 - MER5B DNA MER1_type -8 170 1 337 289 96 36 chr17 34411631 34411797 -55092756 + MIR SINE MIR 15 190 -72 359 259 0 12 chr17 34412255 34412340 -55092213 + MIR3 SINE MIR 79 162 -46 226 214 0 0 chr17 34413025 34413067 -55091486 + CT-rich Low_complexity Low_complexity 1 42 0 477 289 93 25 chr17 34413333 34413537 -55091016 - MIR SINE MIR -11 251 34 415 241 56 0 chr17 34413528 34413636 -55090917 + L2 LINE L2 3199 3312 -1 * 197 83 28 0 chr17 34414464 34414500 -55090053 + (TTG)n Simple_repeat Simple_repeat 3 39 0 749 314 155 15 chr17 34414858 34415402 -55089151 - L2 LINE L2 -3 3310 2698 968 176 16 39 chr17 34415874 34415914 -55088639 - MER5B DNA MER1_type 0 178 139 2007 232 103 12 chr17 34415914 34416410 -55088143 + MLT1F LTR MaLR 1 541 -1 968 176 16 39 chr17 34416410 34416551 -55088002 - MER5B DNA MER1_type -39 139 1 198 393 40 35 chr17 34417384 34417548 -55087005 - L2 LINE L2 -52 3220 3052 2318 60 0 0 chr17 34417548 34417866 -55086687 - AluY SINE Alu 0 318 1 198 393 40 35 chr17 34417866 34417901 -55086652 - L2 LINE L2 -220 3052 3019 590 280 6 17 chr17 34418742 34418917 -55085636 - MER102b DNA MER1_type -51 290 118 1809 117 11 4 chr17 34419502 34419768 -55084785 + AluSx SINE Alu 1 268 -44 2086 138 21 53 chr17 34420254 34420411 -55084142 + Tigger2a DNA MER2_type 1 161 -2547 1503 157 0 46 chr17 34420411 34420692 -55083861 + AluJo SINE Alu 1 268 -44 2086 138 21 53 chr17 34420692 34420912 -55083641 + Tigger2a DNA MER2_type 161 366 -68 3451 108 6 0 chr17 34420912 34421405 -55083148 + L1PA13 LINE L1 5324 5819 -344 2042 105 40 46 chr17 34421506 34421772 -55082781 + L1PA13 LINE L1 5794 6059 -104 2035 110 23 16 chr17 34421772 34422082 -55082471 + AluSx SINE Alu 1 312 0 2042 105 40 46 chr17 34422082 34422186 -55082367 + L1PA13 LINE L1 6059 6162 -1 915 279 89 58 chr17 34422264 34422314 -55082239 + HAL1b LINE L1 47 94 -1254 383 237 136 17 chr17 34422314 34422468 -55082085 + FLAM_A SINE Alu 1 133 0 915 279 89 58 chr17 34422468 34423172 -55081381 + HAL1b LINE L1 94 824 -524 2366 213 80 81 chr17 34423336 34424256 -55080297 + L1MC5 LINE L1 6480 7418 -543 477 317 0 14 chr17 34424570 34424715 -55079838 - MIR3 SINE MIR -21 187 45 240 212 45 15 chr17 34424794 34424860 -55079693 + MIR3 SINE MIR 87 154 -54 2344 116 140 8 chr17 34424983 34425361 -55079192 + MSTA LTR MaLR 1 428 0 254 303 141 43 chr17 34425439 34425624 -55078929 + L2 LINE L2 2610 2812 -502 347 333 126 67 chr17 34425681 34426038 -55078515 + L2 LINE L2 2895 3272 0 526 295 132 70 chr17 34426904 34427321 -55077232 + L2 LINE L2 2828 3270 -2 21 0 0 0 chr17 34427324 34427345 -55077208 + AT_rich Low_complexity Low_complexity 1 21 0 1450 256 115 56 chr17 34428581 34429150 -55075403 + MLT1G LTR MaLR 3 590 0 372 326 11 43 chr17 34429957 34430141 -55074412 + MIR SINE MIR 54 231 -31 * 683 328 25 4 chr17 34430117 34430352 -55074201 - MIR SINE MIR -11 251 12 3358 141 35 11 chr17 34431388 34431929 -55072624 - MER41C LTR ERV1 0 554 1 183 203 253 38 chr17 34432108 34432187 -55072366 + MIR SINE MIR 53 148 -114 2135 269 33 122 chr17 34433849 34434252 -55070301 + LTR8A LTR ERV1 34 471 -256 1971 127 3 3 chr17 34434252 34434551 -55070002 - AluSx SINE Alu -13 299 1 1450 151 0 8 chr17 34434555 34434823 -55069730 - AluSq SINE Alu 0 314 49 2135 269 33 122 chr17 34434823 34435175 -55069378 + LTR8A LTR ERV1 474 727 0 301 324 29 29 chr17 34435334 34435473 -55069080 - MIR SINE MIR -18 244 106 224 238 95 0 chr17 34435470 34435533 -55069020 - MER5A DNA MER1_type -62 127 59 * 22 0 0 0 chr17 34435578 34435600 -55068953 + AT_rich Low_complexity Low_complexity 1 22 0 2755 242 49 43 chr17 34435608 34436744 -55067809 - L2 LINE L2 -149 3164 2034 664 48 0 0 chr17 34436868 34436952 -55067601 - L1PA5 LINE L1 0 6154 6071 507 335 24 0 chr17 34437009 34437176 -55067377 - MIR SINE MIR -13 249 79 211 149 43 0 chr17 34437290 34437337 -55067216 + (CAT)n Simple_repeat Simple_repeat 3 51 0 500 320 52 21 chr17 34437344 34437538 -55067015 - MIR SINE MIR -15 247 48 1893 138 0 0 chr17 34437578 34437860 -55066693 - AluSx SINE Alu -30 282 1 210 189 0 0 chr17 34438332 34438369 -55066184 + MIR SINE MIR 89 125 -83 340 232 125 54 chr17 34438584 34438752 -55065801 + MIR SINE MIR 24 203 -59 280 149 0 0 chr17 34439423 34439470 -55065083 + MIR SINE MIR 82 128 -134 183 269 30 0 chr17 34439566 34439633 -55064920 + MIR SINE MIR 168 236 -26 565 272 31 31 chr17 34439700 34439891 -55064662 + MIR SINE MIR 47 237 -25 2056 132 0 0 chr17 34440474 34440822 -55063731 + AluSx SINE Alu 2 349 0 183 42 0 0 chr17 34440848 34440872 -55063681 + (ATG)n Simple_repeat Simple_repeat 1 24 0 312 270 161 57 chr17 34440876 34441087 -55063466 - MIR SINE MIR -10 252 20 300 347 146 24 chr17 34442019 34442232 -55062321 + MIR SINE MIR 21 259 -3 307 308 76 41 chr17 34442240 34442412 -55062141 + MIR SINE MIR 10 187 -75 422 302 121 7 chr17 34443095 34443244 -55061309 - MIR SINE MIR -25 237 72 191 374 47 19 chr17 34443238 34443345 -55061208 + L2 LINE L2 3157 3266 -6 * 284 62 0 21 chr17 34443538 34443586 -55060967 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 201 364 10 30 chr17 34443590 34443689 -55060864 + L2 LINE L2 2994 3090 -182 1678 309 136 19 chr17 34444173 34445034 -55059519 + L3 LINE CR1 614 1575 -2 684 324 40 32 chr17 34445449 34445702 -55058851 + MIR SINE MIR 6 260 -2 238 133 0 117 chr17 34446111 34446171 -55058382 - Tigger5 DNA MER2_type -354 1969 1917 225 232 71 0 chr17 34446575 34446631 -55057922 + L2 LINE L2 3186 3245 -27 507 312 135 51 chr17 34446648 34447388 -55057165 + L2 LINE L2 2152 2953 -361 255 31 0 0 chr17 34447454 34447486 -55057067 + (TG)n Simple_repeat Simple_repeat 2 33 0 1377 99 0 0 chr17 34447526 34447698 -55056855 - AluSq SINE Alu -141 172 1 420 265 8 0 chr17 34447699 34447816 -55056737 - MIR SINE MIR -56 206 89 472 176 55 0 chr17 34448120 34448211 -55056342 + MLT1D LTR MaLR 44 139 -366 505 148 0 1 chr17 34448243 34448334 -55056219 + L1MA9 LINE L1 6072 6170 -130 878 240 33 107 chr17 34448343 34448382 -55056171 + MLT1D LTR MaLR 175 215 -288 1560 116 0 18 chr17 34448382 34448653 -55055900 + AluSg/x SINE Alu 73 310 0 878 240 33 107 chr17 34448653 34448884 -55055669 + MLT1D LTR MaLR 215 461 -42 1095 242 5 0 chr17 34449442 34449661 -55054892 + MER58A DNA MER1_type 5 224 0 1872 134 33 11 chr17 34449743 34450055 -55054498 + AluSx SINE Alu 1 318 0 1954 92 4 0 chr17 34450156 34450405 -55054148 + AluSp SINE Alu 53 302 -11 367 315 31 6 chr17 34451401 34451563 -55052990 + MIR SINE MIR 47 212 -50 515 170 0 0 chr17 34452375 34452469 -55052084 + L1MA4 LINE L1 6084 6177 -123 349 61 0 0 chr17 34452469 34452518 -55052035 + Alu SINE Alu 251 299 -3 480 225 8 0 chr17 34452518 34452690 -55051863 + L1MA4 LINE L1 6165 6337 0 224 301 115 64 chr17 34452835 34452901 -55051652 + L2 LINE L2 3150 3211 -102 1633 210 94 44 chr17 34452901 34453378 -55051175 + MLT1D LTR MaLR 3 503 -2 224 301 115 64 chr17 34453378 34453467 -55051086 + L2 LINE L2 3211 3313 0 306 288 125 12 chr17 34453498 34453658 -55050895 + MIR SINE MIR 20 197 -65 2072 130 23 10 chr17 34454349 34454657 -55049896 - AluSx SINE Alu 0 312 1 375 229 28 42 chr17 34454962 34455106 -55049447 + MLT1L LTR MaLR 134 275 -340 690 134 21 49 chr17 34455128 34455270 -55049283 + L1MB3 LINE L1 6042 6179 -4 338 259 38 60 chr17 34455401 34455586 -55048967 + L2 LINE L2 2171 2351 -963 1939 128 24 24 chr17 34455649 34455945 -55048608 - AluSx SINE Alu -16 296 1 276 335 60 20 chr17 34456405 34456605 -55047948 + L2 LINE L2 3106 3313 0 351 233 33 0 chr17 34456865 34456955 -55047598 + MIR SINE MIR 103 195 -67 351 0 0 0 chr17 34457328 34457367 -55047186 + (TG)n Simple_repeat Simple_repeat 1 39 0 1345 248 60 28 chr17 34458212 34458679 -55045874 - L1ME1 LINE L1 -5 6161 5680 1642 194 11 55 chr17 34459224 34459606 -55044947 - MLT1A1 LTR MaLR 0 365 1 2593 139 12 5 chr17 34459780 34460197 -55044356 - L1PA16 LINE L1 -6 6160 5741 431 309 11 11 chr17 34460472 34460650 -55043903 - MIR3 SINE MIR -10 198 21 249 119 0 0 chr17 34461432 34461474 -55043079 + MIR SINE MIR 117 158 -104 590 271 49 22 chr17 34461553 34461778 -55042775 + MIR SINE MIR 32 262 0 189 74 0 0 chr17 34461823 34461850 -55042703 + (T)n Simple_repeat Simple_repeat 1 27 0 199 200 109 0 chr17 34462125 34462180 -55042373 - L2 LINE L2 -54 3259 3199 180 0 0 0 chr17 34462216 34462236 -55042317 + (CTG)n Simple_repeat Simple_repeat 1 20 0 612 316 48 16 chr17 34462284 34462534 -55042019 - MIR SINE MIR -2 260 3 651 232 150 24 chr17 34463070 34463277 -55041276 + MIR SINE MIR 26 258 -4 276 284 42 0 chr17 34463291 34463386 -55041167 + MIR3 SINE MIR 92 190 -18 641 219 96 11 chr17 34465248 34465435 -55039118 - MIR SINE MIR -6 256 54 462 219 84 0 chr17 34466514 34466633 -55037920 - L2 LINE L2 -3 3310 3182 652 229 84 34 chr17 34466779 34466958 -55037595 + MLT1J LTR MaLR 1 188 -323 285 257 0 0 chr17 34468466 34468536 -55036017 + L2 LINE L2 3203 3272 0 1169 57 17 11 chr17 34469041 34469217 -55035336 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 249 33 0 0 chr17 34469249 34469279 -55035274 + (TC)n Simple_repeat Simple_repeat 1 30 0 264 59 0 0 chr17 34469279 34469313 -55035240 + (TA)n Simple_repeat Simple_repeat 1 34 0 2401 102 0 3 chr17 34469952 34470265 -55034288 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 34470675 34470696 -55033857 + AT_rich Low_complexity Low_complexity 1 21 0 7711 61 2 6 chr17 34470696 34471698 -55032855 + L1P LINE L1 4256 5253 -893 930 146 0 0 chr17 34471702 34471832 -55032721 - AluSq/x SINE Alu -182 130 1 22 35 0 0 chr17 34471835 34471864 -55032689 + AT_rich Low_complexity Low_complexity 1 29 0 3045 114 57 64 chr17 34471965 34472543 -55032010 + MER4B LTR ERV1 1 574 -36 26 30 0 0 chr17 34473226 34473259 -55031294 + AT_rich Low_complexity Low_complexity 1 33 0 229 370 0 47 chr17 34473294 34473421 -55031132 - MIR SINE MIR -60 148 28 188 316 51 70 chr17 34474470 34474628 -55029925 - L2 LINE L2 -22 3250 3096 228 364 20 10 chr17 34474855 34475017 -55029536 + MER5A DNA MER1_type 12 186 -3 710 233 6 6 chr17 34475039 34475198 -55029355 - MER5A DNA MER1_type -14 175 17 684 230 95 25 chr17 34476391 34476591 -55027962 - MIR SINE MIR -2 260 47 2320 115 0 0 chr17 34476607 34476911 -55027642 - AluSq SINE Alu -9 304 1 300 292 99 25 chr17 34476985 34477146 -55027407 - MIR SINE MIR -74 188 16 319 203 40 0 chr17 34477546 34477620 -55026933 + MIR SINE MIR 119 195 -67 186 184 0 0 chr17 34478211 34478249 -55026304 + MIR SINE MIR 92 129 -133 307 216 174 79 chr17 34478644 34478677 -55025876 - LTR33 LTR ERVL -4 517 489 2048 122 3 35 chr17 34478677 34478988 -55025565 + AluSx SINE Alu 2 302 -10 307 216 174 79 chr17 34478988 34479144 -55025409 - LTR33 LTR ERVL -32 489 310 602 254 8 0 chr17 34479260 34479390 -55025163 - LTR33 LTR ERVL -372 149 19 252 230 0 58 chr17 34479803 34479890 -55024663 - L1ME4a LINE L1 -74 6047 5966 2141 114 4 0 chr17 34481122 34481427 -55023126 - AluSx SINE Alu 0 306 1 504 302 140 22 chr17 34482258 34482709 -55021844 - L2 LINE L2 -4 3309 2806 212 320 117 47 chr17 34482887 34483487 -55021066 + L2 LINE L2 743 1384 -1930 317 286 13 0 chr17 34483669 34483746 -55020807 + L2 LINE L2 3230 3307 -6 503 250 35 46 chr17 34484679 34484864 -55019689 - MIR SINE MIR -40 168 17 232 272 0 37 chr17 34485660 34485741 -55018812 + MIR SINE MIR 74 151 -111 2172 193 90 9 chr17 34485895 34486362 -55018191 + MLT1D LTR MaLR 1 505 0 998 193 74 4 chr17 34486532 34486776 -55017777 - Charlie5 DNA MER1_type 0 2624 2364 2372 159 62 19 chr17 34486780 34487246 -55017307 + MER66B LTR ERV1 1 486 0 507 310 12 6 chr17 34488375 34488546 -55016007 - MIR SINE MIR -89 173 2 218 318 0 0 chr17 34488562 34488625 -55015928 + L2 LINE L2 3205 3267 -5 240 296 63 14 chr17 34489460 34489561 -55014992 - MIR SINE MIR -60 148 37 * 560 271 26 0 chr17 34489524 34489679 -55014874 + MIR SINE MIR 17 175 -87 2088 159 48 22 chr17 34489679 34490212 -55014341 + MLT2A2 LTR ERVL 1 554 0 390 134 0 15 chr17 34490717 34490784 -55013769 - L1MB2 LINE L1 -2 6169 6104 274 348 62 49 chr17 34540815 34541220 -54963333 + L2 LINE L2 2566 2975 -339 367 245 0 43 chr17 34541325 34541419 -54963134 - L1MC4 LINE L1 -1339 6703 6614 313 277 79 0 chr17 34541334 34541435 -54963118 + L1MC3 LINE L1 6538 6646 -1139 * 257 269 15 0 chr17 34541727 34541794 -54962759 + MIR SINE MIR 62 129 -133 561 287 77 29 chr17 34542007 34542215 -54962338 + MLT1J2 LTR MaLR 74 261 -189 953 211 16 0 chr17 34542215 34542400 -54962153 - MER5A DNA MER1_type -1 188 1 561 287 77 29 chr17 34542400 34542448 -54962105 + MLT1J2 LTR MaLR 261 305 -145 200 204 0 37 chr17 34543759 34543813 -54960740 + MIR SINE MIR 20 71 -137 1311 267 58 47 chr17 34543860 34544393 -54960160 + L2 LINE L2 2781 3313 0 185 333 30 0 chr17 34544394 34544460 -54960093 + MIR3 SINE MIR 138 205 -3 418 301 10 78 chr17 34545969 34546079 -54958474 + MIR SINE MIR 48 141 -121 1883 146 3 7 chr17 34546079 34546387 -54958166 - AluSx SINE Alu -5 307 1 418 301 10 78 chr17 34546387 34546469 -54958084 + MIR SINE MIR 141 227 -35 246 356 139 0 chr17 34546597 34546799 -54957754 - L3 LINE CR1 -90 1487 1258 433 272 37 1 chr17 34547131 34547250 -54957303 - MIR SINE MIR -63 145 42 767 199 0 0 chr17 34547570 34547701 -54956852 - FLAM_A SINE Alu -2 131 1 1698 254 54 8 chr17 34548012 34548585 -54955968 + MLT2F LTR ERVL 3 650 -13 319 225 56 22 chr17 34548630 34548719 -54955834 + L2 LINE L2 2993 3084 -188 473 299 60 16 chr17 34550588 34550772 -54953781 + MIR3 SINE MIR 5 196 -12 200 94 31 0 chr17 34550984 34551016 -54953537 + (TG)n Simple_repeat Simple_repeat 1 33 0 529 276 53 18 chr17 34552028 34552198 -54952355 + MER5B DNA MER1_type 1 176 -2 533 194 200 39 chr17 34552219 34552374 -54952179 + MER5A DNA MER1_type 7 186 -3 393 307 47 13 chr17 34552424 34552574 -54951979 + MIR SINE MIR 94 248 -14 303 226 24 12 chr17 34552600 34552684 -54951869 + MIR SINE MIR 178 262 0 233 288 56 69 chr17 34553696 34553856 -54950697 - MIR SINE MIR -5 257 100 47 44 0 0 chr17 34553856 34553924 -54950629 + AT_rich Low_complexity Low_complexity 1 68 0 389 268 79 73 chr17 34555081 34555245 -54949308 - L2 LINE L2 -6 3266 3102 519 190 0 10 chr17 34555681 34555781 -54948772 - MER20 DNA MER1_type 0 219 121 1717 103 4 0 chr17 34555916 34556150 -54948403 + AluSx SINE Alu 1 235 -77 375 60 0 0 chr17 34556155 34556205 -54948348 + (GAAA)n Simple_repeat Simple_repeat 2 51 0 264 327 105 7 chr17 34556495 34556648 -54947905 - MIR3 SINE MIR -6 202 35 259 301 106 24 chr17 34556714 34556837 -54947716 + MIR3 SINE MIR 76 208 0 314 348 50 12 chr17 34557447 34557608 -54946945 - MIR SINE MIR -75 187 21 497 244 67 62 chr17 34557799 34557992 -54946561 - MIR SINE MIR -47 215 22 2262 72 3 16 chr17 34558123 34558427 -54946126 - AluY SINE Alu -11 300 1 618 266 15 54 chr17 34558626 34558829 -54945724 + MLT1J1 LTR MaLR 252 446 0 1509 271 82 51 chr17 34559012 34559179 -54945374 + L2 LINE L2 2358 2518 -795 531 279 34 24 chr17 34559179 34559387 -54945166 - MER63A DNA MER1_type 0 210 1 1509 271 82 51 chr17 34559387 34559576 -54944977 + L2 LINE L2 2518 2700 -613 1687 145 26 43 chr17 34559576 34559880 -54944673 + AluJb SINE Alu 1 299 -13 1509 271 82 51 chr17 34559880 34560440 -54944113 + L2 LINE L2 2700 3312 -1 642 265 58 5 chr17 34560784 34560973 -54943580 + MIR SINE MIR 57 255 -7 329 264 29 79 chr17 34561323 34561463 -54943090 - MIR3 SINE MIR -71 137 5 199 139 28 0 chr17 34561865 34561901 -54942652 - MIR SINE MIR -118 144 108 327 266 176 43 chr17 34562609 34562842 -54941711 - L2 LINE L2 -100 3172 2909 1754 187 83 31 chr17 34562845 34563289 -54941264 - MLT1C LTR MaLR 0 467 1 288 338 45 59 chr17 34563443 34563665 -54940888 + L2 LINE L2 3046 3264 -8 265 343 29 0 chr17 34564292 34564397 -54940156 - MIR3 SINE MIR -10 198 91 501 289 128 5 chr17 34564714 34564918 -54939635 + MIR SINE MIR 4 232 -30 4550 14 1 0 chr17 34564987 34565767 -54938786 - L1PA2 LINE L1 -390 5765 4985 3481 18 0 0 chr17 34565767 34566151 -54938402 + L1PA2 LINE L1 5764 6155 0 648 265 57 38 chr17 34566487 34566698 -54937855 - MIR SINE MIR -15 247 33 2894 208 16 30 chr17 34566724 34567389 -54937164 - L1ME1 LINE L1 -6 6160 5505 998 217 131 38 chr17 34567454 34567827 -54936726 - HsTC2 DNA Tc2 -2 1896 1313 902 226 36 44 chr17 34567849 34568123 -54936430 - HsTC2 DNA Tc2 -1155 743 472 324 279 27 27 chr17 34568104 34568215 -54936338 - HsTC2 DNA Tc2 -1697 201 91 * 268 271 246 8 chr17 34568349 34568467 -54936086 + MIR SINE MIR 5 150 -112 360 263 105 15 chr17 34568885 34569018 -54935535 - L1ME4a LINE L1 -29 6092 5948 209 346 43 37 chr17 34569054 34569242 -54935311 - L2 LINE L2 -575 2739 2551 245 272 298 31 chr17 34570282 34570473 -54934080 + MIR3 SINE MIR 4 246 -16 267 31 0 0 chr17 34571297 34571329 -54933224 + (TTA)n Simple_repeat Simple_repeat 2 33 0 704 154 0 17 chr17 34571331 34571448 -54933105 - FLAM_A SINE Alu -27 115 1 587 240 5 73 chr17 34571463 34571667 -54932886 - MIR SINE MIR 0 262 73 237 159 0 0 chr17 34572171 34572215 -54932338 + (TG)n Simple_repeat Simple_repeat 1 44 0 180 272 99 62 chr17 34572302 34572383 -54932170 - L2 LINE L2 -298 2974 2891 243 312 54 11 chr17 34575015 34575108 -54929445 - MIR SINE MIR -150 112 16 410 382 26 0 chr17 34575164 34575316 -54929237 - L2 LINE L2 0 3272 3117 408 396 4 11 chr17 34575474 34575744 -54928809 + L2 LINE L2 2387 2654 -660 259 226 65 11 chr17 34575818 34575911 -54928642 - L1MEc LINE L1 -5345 1197 1100 266 31 0 0 chr17 34575911 34575943 -54928610 - LTR13 LTR ERVK 0 1007 976 713 242 167 0 chr17 34576104 34576290 -54928263 - MER58A DNA MER1_type -4 220 4 1439 162 147 4 chr17 34576314 34576573 -54927980 - AluSx SINE Alu -5 297 2 437 415 49 14 chr17 34576793 34577138 -54927415 - L1MEc LINE L1 -6000 825 469 206 357 89 9 chr17 34577140 34577252 -54927301 + L2 LINE L2 2638 2758 -556 199 352 9 67 chr17 34577272 34577377 -54927176 + L2 LINE L2 3174 3272 0 522 308 48 31 chr17 34578224 34578451 -54926102 - MIR SINE MIR -6 256 26 311 345 65 93 chr17 34579618 34579896 -54924657 + L2 LINE L2 3002 3271 -1 361 286 158 0 chr17 34580773 34580949 -54923604 - MIR SINE MIR -43 219 18 331 281 54 42 chr17 34581196 34581363 -54923190 - MIR3 SINE MIR -1 207 39 2604 290 28 6 chr17 34582168 34582668 -54921885 + MER9 LTR ERVK 1 511 0 319 265 176 0 chr17 34582848 34582950 -54921603 - MIR SINE MIR -63 145 26 493 201 158 43 chr17 34583163 34583327 -54921226 + MLT1L LTR MaLR 163 345 -270 347 330 77 10 chr17 34584320 34584514 -54920039 + L2 LINE L2 2815 3021 -251 590 297 161 42 chr17 34584618 34585300 -54919253 - L2 LINE L2 -182 3131 2351 186 276 11 58 chr17 34585994 34586081 -54918472 + L2 LINE L2 2945 3027 -245 246 185 0 37 chr17 34586652 34586706 -54917847 - L2 LINE L2 -1 3312 3261 267 214 0 0 chr17 34587119 34587189 -54917364 + (TCCA)n Simple_repeat Simple_repeat 4 73 0 335 113 16 0 chr17 34587235 34587297 -54917256 + (TCCA)n Simple_repeat Simple_repeat 4 66 0 219 217 0 58 chr17 34587474 34587543 -54917010 + CT-rich Low_complexity Low_complexity 1 65 0 851 243 78 67 chr17 34588186 34588557 -54915996 - MLT1H LTR MaLR -104 445 71 491 305 53 21 chr17 34588810 34588997 -54915556 + L2 LINE L2 3120 3312 -1 21 57 0 0 chr17 34590810 34590845 -54913708 + AT_rich Low_complexity Low_complexity 1 35 0 2020 142 0 0 chr17 34591074 34591384 -54913169 - AluSx SINE Alu -2 310 1 453 311 83 16 chr17 34591621 34591933 -54912620 - L1ME LINE L1 -549 5613 5281 977 179 4 92 chr17 34591933 34592173 -54912380 - MER20 DNA MER1_type 0 219 1 322 268 126 24 chr17 34592394 34592521 -54912032 - MIR SINE MIR -93 169 30 * 385 294 129 6 chr17 34592514 34592677 -54911876 + MIR3 SINE MIR 12 194 -14 252 319 175 0 chr17 34592694 34592854 -54911699 + MIR SINE MIR 63 250 -12 258 259 90 15 chr17 34593773 34593877 -54910676 + MIR SINE MIR 14 127 -81 201 216 0 0 chr17 34593913 34593950 -54910603 + L2 LINE L2 3210 3246 -26 408 274 219 18 chr17 34594016 34594180 -54910373 + MIR SINE MIR 2 198 -64 801 241 0 6 chr17 34594355 34594525 -54910028 + MIR SINE MIR 84 252 -10 201 394 21 0 chr17 34595059 34595153 -54909400 + MER5A DNA MER1_type 72 167 -22 300 291 76 0 chr17 34595855 34595934 -54908619 + MIR3 SINE MIR 102 186 -22 2116 113 3 3 chr17 34596523 34596824 -54907729 + AluSq SINE Alu 1 301 -12 3113 132 175 40 chr17 34597015 34597621 -54906932 - LTR12 LTR ERV1 0 688 1 2164 177 115 65 chr17 34598544 34598960 -54905593 + MLT1E2 LTR MaLR 56 507 -119 4016 120 52 2 chr17 34598960 34599569 -54904984 - MER51C LTR ERV1 0 640 1 2164 177 115 65 chr17 34599569 34599693 -54904860 + MLT1E2 LTR MaLR 507 623 -3 240 263 182 0 chr17 34599743 34599842 -54904711 + L2 LINE L2 3156 3272 0 956 264 54 4 chr17 34599958 34600197 -54904356 + MIR SINE MIR 12 262 0 397 305 0 9 chr17 34601907 34602012 -54902541 + MER81 DNA DNA 11 114 0 200 244 98 37 chr17 34603660 34603742 -54900811 + L2 LINE L2 623 709 -2605 486 294 160 17 chr17 34603879 34604110 -54900443 + L2 LINE L2 2606 2869 -445 293 325 201 0 chr17 34604394 34604548 -54900005 - MLT1L LTR MaLR -123 492 308 241 260 0 0 chr17 34604659 34604709 -54899844 - MLT1L LTR MaLR -446 169 120 496 275 62 38 chr17 34605318 34605478 -54899075 + MIR3 SINE MIR 20 183 -25 348 328 128 57 chr17 34605557 34605908 -54898645 - L2 LINE L2 -3 3310 2935 271 315 95 25 chr17 34606138 34606379 -54898174 - L2 LINE L2 0 3272 3015 2838 186 33 16 chr17 34606399 34606979 -54897574 - L1MB4 LINE L1 -2 6178 5589 336 258 0 49 chr17 34607590 34607753 -54896800 + (CCCCAA)n Simple_repeat Simple_repeat 6 160 0 380 327 64 0 chr17 34608406 34608562 -54895991 - MER117 DNA MER1_type -3 194 29 932 280 115 31 chr17 34608570 34608988 -54895565 + LTR16A1 LTR ERVL 1 453 -4 348 287 26 17 chr17 34609114 34609229 -54895324 - L2 LINE L2 -6 3307 3192 241 321 73 37 chr17 34610379 34610488 -54894065 + MIR3 SINE MIR 93 205 -3 513 254 170 36 chr17 34610533 34610757 -54893796 + MIR SINE MIR 8 261 -1 427 266 18 109 chr17 34611526 34611599 -54892954 - MIR SINE MIR -50 212 134 2361 70 0 0 chr17 34611599 34611897 -54892656 + AluY SINE Alu 1 298 -13 427 266 18 109 chr17 34611897 34611991 -54892562 - MIR SINE MIR -128 134 69 1503 191 3 19 chr17 34611991 34612300 -54892253 + AluJo SINE Alu 1 304 -8 427 266 18 109 chr17 34612300 34612360 -54892193 - MIR SINE MIR -193 69 5 468 325 66 6 chr17 34612650 34612816 -54891737 + MIR SINE MIR 22 197 -65 240 273 0 0 chr17 34613091 34613146 -54891407 - L3b LINE CR1 -420 1163 1109 258 253 13 27 chr17 34613708 34613783 -54890770 + CT-rich Low_complexity Low_complexity 1 74 0 334 257 73 37 chr17 34613920 34614029 -54890524 - MIR SINE MIR -117 145 33 342 296 59 13 chr17 34614724 34614876 -54889677 - MIR3 SINE MIR -13 195 37 201 234 21 21 chr17 34615221 34615268 -54889285 - L3 LINE CR1 -959 618 572 194 258 0 76 chr17 34616125 34616191 -54888362 + MIR SINE MIR 126 186 -76 642 272 193 3 chr17 34616918 34617219 -54887334 + L2 LINE L2 2385 2742 -572 347 102 0 0 chr17 34617228 34617277 -54887276 + MSTD LTR MaLR 1 49 -347 * 1114 196 58 22 chr17 34617273 34617498 -54887055 + MSTD LTR MaLR 153 385 -11 6643 211 90 47 chr17 34617507 34617652 -54886901 + MSTD-int LTR MaLR 2 139 -1596 894 63 79 8 chr17 34617652 34617778 -54886775 + MER85 DNA T2_type 1 135 -4 6643 211 90 47 chr17 34617778 34619289 -54885264 + MSTD-int LTR MaLR 139 1730 -5 1992 160 81 6 chr17 34619294 34619651 -54884902 + MSTD LTR MaLR 1 384 -12 297 209 209 81 chr17 34619679 34619827 -54884726 + L2 LINE L2 2797 2963 -351 180 158 0 0 chr17 34620281 34620319 -54884234 + (TGG)n Simple_repeat Simple_repeat 2 39 0 1165 267 89 22 chr17 34620764 34621135 -54883418 - MLT1J1 LTR MaLR -2 444 49 315 324 0 27 chr17 34621923 34622034 -54882519 - MIR SINE MIR -85 123 16 234 0 0 0 chr17 34622068 34622094 -54882459 + (TC)n Simple_repeat Simple_repeat 1 26 0 237 65 0 0 chr17 34623746 34623777 -54880776 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 293 290 115 91 chr17 34624862 34625148 -54879405 + L3 LINE CR1 1084 1376 -201 199 321 77 42 chr17 34625235 34625403 -54879150 - MIR SINE MIR -54 208 35 651 298 135 30 chr17 34626146 34626767 -54877786 + L2 LINE L2 2552 3237 -76 390 256 6 45 chr17 34626811 34626967 -54877586 + GA-rich Low_complexity Low_complexity 4 153 0 333 100 0 0 chr17 34627109 34627159 -54877394 + (CA)n Simple_repeat Simple_repeat 1 50 0 2030 113 3 0 chr17 34627223 34627507 -54877046 - AluSx SINE Alu -23 289 5 1461 173 32 0 chr17 34627656 34627757 -54876796 + AluJo SINE Alu 21 117 -195 329 0 24 0 chr17 34627757 34627798 -54876755 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1461 173 32 0 chr17 34627798 34627979 -54876574 + AluJo SINE Alu 117 312 0 270 302 143 16 chr17 34628301 34628427 -54876126 + MIR3 SINE MIR 2 143 -65 315 234 50 63 chr17 34628495 34628643 -54875910 - MLT1H LTR MaLR -2 611 431 273 305 95 60 chr17 34628654 34628854 -54875699 - MLT1I LTR MaLR -123 286 80 2145 194 72 23 chr17 34628925 34629358 -54875195 - MLT2B1 LTR ERVL -66 454 1 420 262 97 46 chr17 34629617 34629869 -54874684 + MLT1J1 LTR MaLR 66 325 -84 2125 83 30 10 chr17 34630421 34630721 -54873832 - AluY SINE Alu -5 306 1 759 292 138 48 chr17 34630776 34631213 -54873340 - L1MC4a LINE L1 -223 5898 5425 189 405 0 12 chr17 34631512 34631596 -54872957 + L3 LINE CR1 1431 1513 -64 227 199 199 30 chr17 34631658 34631789 -54872764 - L1ME4a LINE L1 -2 6119 5967 844 272 5 5 chr17 34631851 34632057 -54872496 + MIR SINE MIR 3 208 -54 438 294 140 25 chr17 34632116 34632402 -54872151 - L1ME4a LINE L1 -327 5794 5476 633 90 150 0 chr17 34632653 34632753 -54871800 - L1PA10 LINE L1 -1 6167 6053 445 298 41 0 chr17 34633465 34633586 -54870967 + MIR SINE MIR 4 129 -133 227 239 109 76 chr17 34633754 34633846 -54870707 + LTR33A LTR ERVL 57 151 -372 3577 104 31 2 chr17 34634198 34634715 -54869838 + L1PA15 LINE L1 5624 6155 -10 253 325 167 8 chr17 34634768 34634894 -54869659 + MIR SINE MIR 9 154 -108 779 196 0 0 chr17 34635274 34635407 -54869146 - FLAM_A SINE Alu 0 133 1 320 297 22 114 chr17 34635733 34636053 -54868500 + L2 LINE L2 2769 3058 -214 532 202 0 75 chr17 34636091 34636279 -54868274 + Charlie7 DNA MER1_type 991 1164 -1448 3299 212 43 17 chr17 34636361 34637234 -54867319 + Charlie7 DNA MER1_type 1156 2051 -561 189 0 0 0 chr17 34637293 34637314 -54867239 + (A)n Simple_repeat Simple_repeat 1 21 0 777 310 86 48 chr17 34637934 34638411 -54866142 + L2 LINE L2 2818 3312 -1 522 222 32 8 chr17 34638942 34639068 -54865485 + MIR SINE MIR 131 259 -3 251 319 0 0 chr17 34639129 34639198 -54865355 - L2 LINE L2 -1 3312 3244 232 291 12 35 chr17 34639270 34639356 -54865197 - L2 LINE L2 -223 3049 2966 354 325 53 48 chr17 34639580 34639808 -54864745 + MIR SINE MIR 20 248 -14 394 270 101 42 chr17 34640044 34640269 -54864284 - MIR SINE MIR -11 251 10 1917 111 3 31 chr17 34640291 34640619 -54863934 - AluSc SINE Alu 0 320 1 328 330 98 17 chr17 34641643 34641816 -54862737 + MIR3 SINE MIR 19 205 -3 1508 244 77 35 chr17 34642017 34642178 -54862375 + MLT1F LTR MaLR 4 157 -385 803 26 35 0 chr17 34642178 34642292 -54862261 + (TCTA)n Simple_repeat Simple_repeat 3 120 0 1508 244 77 35 chr17 34642292 34642647 -54861906 + MLT1F LTR MaLR 157 542 0 382 319 30 7 chr17 34643063 34643198 -54861355 + MIR3 SINE MIR 30 167 -41 246 181 83 42 chr17 34643569 34643641 -54860912 + MER113 DNA MER1_type? 445 519 -2 348 324 126 32 chr17 34643702 34644106 -54860447 + L2 LINE L2 2451 2892 -422 305 339 146 37 chr17 34644181 34644476 -54860077 + L2 LINE L2 2942 3268 -4 1190 67 0 0 chr17 34644950 34645100 -54859453 + AluY SINE Alu 150 299 -12 1652 179 3 17 chr17 34645346 34645643 -54858910 - AluJo SINE Alu -14 298 6 536 244 53 84 chr17 34645707 34645969 -54858584 - MIR SINE MIR 0 262 9 180 382 24 0 chr17 34647099 34647222 -54857331 + L2 LINE L2 2634 2759 -555 782 255 34 10 chr17 34647653 34647861 -54856692 + MIR SINE MIR 50 262 0 470 291 0 0 chr17 34648551 34648678 -54855875 + MIR SINE MIR 105 231 -31 274 85 43 0 chr17 34648945 34648992 -54855561 + L3 LINE CR1 1525 1573 -4 718 250 83 0 chr17 34649072 34649288 -54855265 + MIR SINE MIR 2 235 -27 623 213 21 21 chr17 34649642 34649783 -54854770 - FLAM_C SINE Alu -1 142 2 1548 60 0 0 chr17 34651558 34651741 -54852812 - AluY SINE Alu -2 309 127 246 62 0 0 chr17 34651741 34651773 -54852780 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 1053 85 0 0 chr17 34651773 34651903 -54852650 - AluYb8 SINE Alu -186 132 3 210 198 10 125 chr17 34651921 34652017 -54852536 - L2 LINE L2 -94 3219 3135 227 214 36 0 chr17 34652244 34652300 -54852253 - MER116 DNA Mariner 0 80 23 296 322 156 6 chr17 34652301 34652481 -54852072 - MIR SINE MIR -5 257 51 382 276 119 46 chr17 34652922 34653183 -54851370 + L1MC4a LINE L1 5685 5964 -157 245 151 19 0 chr17 34653903 34653956 -54850597 + (CA)n Simple_repeat Simple_repeat 2 55 0 198 270 0 0 chr17 34654053 34654116 -54850437 + CT-rich Low_complexity Low_complexity 1 63 0 263 203 14 0 chr17 34654649 34654718 -54849835 + L1MA8 LINE L1 6221 6290 -1 2679 176 67 75 chr17 34654777 34655508 -54849045 - LTR8A LTR ERV1 -2 725 1 785 316 64 18 chr17 34655792 34656074 -54848479 + LTR16C LTR ERVL 98 392 -99 306 241 138 17 chr17 34658517 34658633 -54845920 - MIR3 SINE MIR -66 142 13 279 279 0 0 chr17 34658900 34658979 -54845574 + MIR SINE MIR 117 195 -67 226 164 36 18 chr17 34659531 34659586 -54844967 + L2 LINE L2 3258 3313 0 532 238 57 66 chr17 34660095 34660172 -54844381 + MER112 DNA MER1_type 5 81 -179 593 189 44 56 chr17 34660172 34660352 -54844201 + MER104 DNA MER2_type 3 180 0 532 238 57 66 chr17 34660352 34660501 -54844052 + MER112 DNA MER1_type 81 229 -31 338 359 51 5 chr17 34660700 34660895 -54843658 + MIR SINE MIR 58 261 -1 266 291 0 0 chr17 34661941 34662020 -54842533 + (TAGG)n Simple_repeat Simple_repeat 4 82 0 195 214 0 0 chr17 34662177 34662219 -54842334 - MIR SINE MIR -114 148 107 475 336 56 22 chr17 34662899 34663131 -54841422 - MIR SINE MIR -17 245 6 251 371 48 6 chr17 34664210 34664377 -54840176 + MIR SINE MIR 89 262 0 200 356 0 0 chr17 34664657 34664730 -54839823 + (TG)n Simple_repeat Simple_repeat 2 74 0 201 368 13 0 chr17 34665367 34665443 -54839110 + L2 LINE L2 2544 2620 -694 311 290 21 0 chr17 34665450 34665543 -54839010 + L2 LINE L2 3219 3313 0 5805 198 45 13 chr17 34665919 34668137 -54836416 + L1MD1 LINE L1 3938 6242 0 180 0 0 0 chr17 34668181 34668201 -54836352 + (CA)n Simple_repeat Simple_repeat 2 21 0 622 201 41 96 chr17 34668212 34668431 -54836122 + L1MD3 LINE L1 7789 7995 0 788 297 55 0 chr17 34669422 34669658 -54834895 - MIR SINE MIR 0 262 14 300 287 68 17 chr17 34669973 34670147 -54834406 + MIR SINE MIR 10 190 -67 235 297 94 14 chr17 34670294 34670432 -54834121 + L2 LINE L2 3006 3154 -159 265 325 60 0 chr17 34670926 34671043 -54833510 - MIR SINE MIR -30 232 109 251 279 116 23 chr17 34671103 34671232 -54833321 + MIR SINE MIR 101 241 -21 762 174 7 7 chr17 34671904 34672042 -54832511 + FLAM_C SINE Alu 6 143 0 189 312 123 14 chr17 34672227 34672365 -54832188 + MIR SINE MIR 89 241 -21 200 111 28 0 chr17 34673308 34673344 -54831209 + GA-rich Low_complexity Low_complexity 2 38 0 230 294 184 15 chr17 34673618 34673754 -54830799 + L2 LINE L2 2926 3084 -188 198 0 0 0 chr17 34674810 34674832 -54829721 + (A)n Simple_repeat Simple_repeat 1 22 0 1411 185 85 48 chr17 34675512 34675767 -54828786 - MLT1A1 LTR MaLR 0 365 92 1968 138 3 26 chr17 34675767 34676072 -54828481 + AluSx SINE Alu 1 298 -14 1411 185 85 48 chr17 34676072 34676168 -54828385 - MLT1A1 LTR MaLR -273 92 1 3524 121 27 109 chr17 34676351 34676641 -54827912 - Tigger3(Golem) DNA MER2_type 0 3029 2717 2326 60 0 7 chr17 34676641 34676925 -54827628 + AluY SINE Alu 1 282 -29 3524 121 27 109 chr17 34676925 34676983 -54827570 - Tigger3(Golem) DNA MER2_type -312 2717 2656 715 205 87 0 chr17 34676983 34677144 -54827409 + FAM SINE Alu 1 175 0 3524 121 27 109 chr17 34677144 34677547 -54827006 - Tigger3(Golem) DNA MER2_type -373 2656 2339 1915 159 74 0 chr17 34677552 34677878 -54826675 - Tigger3(Golem) DNA MER2_type -2679 350 1 210 310 0 0 chr17 34678542 34678600 -54825953 + MIR SINE MIR 78 135 -73 431 322 20 14 chr17 34679113 34679259 -54825294 - MIR SINE MIR -50 212 66 378 257 44 0 chr17 34679261 34679374 -54825179 + MIR SINE MIR 119 236 -26 2204 115 0 7 chr17 34679384 34679729 -54824824 + AluSx SINE Alu 1 312 0 309 151 0 0 chr17 34679762 34679815 -54824738 + CT-rich Low_complexity Low_complexity 2 54 0 473 304 36 6 chr17 34680161 34680329 -54824224 - MIR SINE MIR -70 192 20 235 358 63 31 chr17 34681130 34681384 -54823169 + L2 LINE L2 2831 3092 -180 1302 261 41 22 chr17 34681504 34681918 -54822635 + Charlie7 DNA MER1_type 35 456 -2156 237 345 149 6 chr17 34682219 34682387 -54822166 - MIR SINE MIR -56 206 15 535 242 34 20 chr17 34683668 34683817 -54820736 - MIR SINE MIR -2 260 110 196 121 0 0 chr17 34684119 34684152 -54820401 - L2 LINE L2 -10 3303 3271 2296 153 52 28 chr17 34684649 34684813 -54819740 + Tigger2a DNA MER2_type 1 160 -2548 2776 132 14 5 chr17 34684813 34685237 -54819316 - MSTA LTR MaLR 0 428 1 2296 153 52 28 chr17 34685237 34685496 -54819057 + Tigger2a DNA MER2_type 160 434 0 325 336 29 0 chr17 34685914 34686051 -54818502 + L1MC/D LINE L1 5585 5725 -2083 23 0 0 0 chr17 34686732 34686755 -54817798 + AT_rich Low_complexity Low_complexity 1 23 0 572 272 112 16 chr17 34686822 34687145 -54817408 - HAL1 LINE L1 -111 2396 2043 287 361 58 23 chr17 34687589 34687894 -54816659 - L2 LINE L2 -220 3052 2740 201 309 62 25 chr17 34688062 34688143 -54816410 - MIR3 SINE MIR -1 207 124 256 263 25 12 chr17 34688163 34688243 -54816310 + L1M LINE L1 5321 5401 -2407 248 232 15 0 chr17 34688983 34689057 -54815496 + L1 LINE L1 4769 4843 -1303 1777 185 25 35 chr17 34689266 34689666 -54814887 + MER7C DNA MER2_type 1 396 -206 1340 150 0 0 chr17 34690113 34690313 -54814240 + MER7C DNA MER2_type 390 589 -13 207 204 0 0 chr17 34690335 34690384 -54814169 + (CA)n Simple_repeat Simple_repeat 2 50 0 499 267 66 27 chr17 34690571 34690829 -54813724 + L1MC/D LINE L1 5261 5528 -2280 2105 71 41 34 chr17 34691920 34692214 -54812339 - AluY SINE Alu -15 296 1 3185 172 190 81 chr17 34692471 34693390 -54811163 + LTR28 LTR ERV1 1 1020 0 1229 167 122 45 chr17 34693634 34693921 -54810632 - MLT1A1 LTR MaLR -54 311 3 311 288 91 15 chr17 34694207 34694339 -54810214 + MIR SINE MIR 104 245 -17 198 91 0 0 chr17 34694345 34694378 -54810175 + (TTG)n Simple_repeat Simple_repeat 1 33 0 255 286 48 12 chr17 34695155 34695239 -54809314 - MIR SINE MIR -127 135 49 951 67 0 0 chr17 34695611 34695730 -54808823 + AluY SINE Alu 180 298 -13 2419 157 36 19 chr17 34696018 34696433 -54808120 + MSTC LTR MaLR 1 422 -6 2192 87 35 0 chr17 34696504 34696670 -54807883 - AluY SINE Alu -14 297 115 233 29 0 29 chr17 34696670 34696705 -54807848 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2192 87 35 0 chr17 34696705 34696825 -54807728 - AluY SINE Alu -196 115 1 910 250 151 19 chr17 34696989 34697301 -54807252 - MLT1I LTR MaLR 0 409 57 383 325 17 0 chr17 34697551 34697668 -54806885 - L2 LINE L2 -1 3271 3153 339 271 107 8 chr17 34697714 34697836 -54806717 + MIR3 SINE MIR 3 136 -72 475 257 53 5 chr17 34699981 34700168 -54804385 - Zaphod DNA AcHobo 0 4031 3836 198 191 0 0 chr17 34700190 34700232 -54804321 + (TA)n Simple_repeat Simple_repeat 2 43 0 280 305 0 15 chr17 34700250 34700381 -54804172 + (TA)n Simple_repeat Simple_repeat 1 129 0 1543 179 23 29 chr17 34700399 34700748 -54803805 - Zaphod DNA AcHobo -180 3851 3505 776 170 23 2 chr17 34700748 34700892 -54803661 - MSTC LTR MaLR 0 428 213 3335 221 118 47 chr17 34700892 34701902 -54802651 - MSTC-int LTR MaLR -646 1089 6 1212 208 0 0 chr17 34701920 34702127 -54802426 - MSTC LTR MaLR -1 427 221 330 304 82 15 chr17 34702319 34702454 -54802099 + L1MEd LINE L1 703 846 -5273 231 260 41 27 chr17 34702471 34702544 -54802009 + MIR SINE MIR 189 262 0 359 230 368 0 chr17 34704001 34704153 -54800400 + MIR SINE MIR 49 256 -6 934 278 193 24 chr17 34704690 34705171 -54799382 - L2 LINE L2 0 3313 2744 1842 151 0 16 chr17 34705179 34705519 -54799034 - AluJb SINE Alu 0 312 2 3759 116 61 5 chr17 34705942 34706512 -54798041 + LTR43 LTR ERV1 1 602 0 280 287 120 42 chr17 34706519 34706686 -54797867 + MIR3 SINE MIR 15 194 -14 1973 214 46 30 chr17 34707218 34707714 -54796839 + MLT1D LTR MaLR 1 504 -1 237 215 83 107 chr17 34707720 34707841 -54796712 - HAL1 LINE L1 -55 2452 2335 206 244 0 0 chr17 34707926 34707967 -54796586 + (CATATA)n Simple_repeat Simple_repeat 3 43 0 287 83 0 21 chr17 34708057 34708105 -54796448 + (TA)n Simple_repeat Simple_repeat 1 47 0 1509 181 11 14 chr17 34708105 34708392 -54796161 - AluJb SINE Alu -26 286 1 3062 277 133 48 chr17 34708414 34710381 -54794172 - HAL1 LINE L1 -365 2142 9 823 200 45 55 chr17 34711126 34711326 -54793227 + MLT1D LTR MaLR 1 198 -307 740 210 93 19 chr17 34711300 34711514 -54793039 + MLT1A1 LTR MaLR 136 365 0 * 181 200 0 29 chr17 34711747 34711782 -54792771 - L3 LINE CR1 -112 1465 1432 374 341 24 78 chr17 34712149 34712445 -54792108 - L2 LINE L2 0 3272 2993 250 301 94 28 chr17 34712501 34712659 -54791894 - MIR3 SINE MIR -8 200 35 804 189 0 24 chr17 34712807 34712976 -54791577 - FRAM SINE Alu -4 172 8 1864 147 177 11 chr17 34713373 34713740 -54790813 - MSTA LTR MaLR 0 428 1 300 303 10 40 chr17 34714090 34714189 -54790364 + L1MC4a LINE L1 5983 6078 -1730 383 186 0 47 chr17 34714212 34714298 -54790255 + MER20 DNA MER1_type 57 138 -81 695 141 8 16 chr17 34714314 34714435 -54790118 + AluJb SINE Alu 5 124 -188 614 340 53 5 chr17 34716479 34716688 -54787865 - MIR SINE MIR -17 245 27 958 147 35 56 chr17 34719681 34719878 -54784675 + MLT1C LTR MaLR 1 193 -274 1469 158 0 24 chr17 34719891 34720144 -54784409 + AluJo SINE Alu 52 298 -14 910 188 0 0 chr17 34720148 34720308 -54784245 + AluJb SINE Alu 138 297 -15 1753 94 4 0 chr17 34720317 34720552 -54784001 + AluY SINE Alu 1 236 -75 782 209 34 28 chr17 34720552 34720729 -54783824 + MLT1C LTR MaLR 290 467 0 2298 72 0 20 chr17 34721318 34721622 -54782931 + AluY SINE Alu 1 298 -13 182 295 16 0 chr17 34721683 34721744 -54782809 - MIR3 SINE MIR -41 167 106 319 233 101 78 chr17 34721751 34721880 -54782673 - L2 LINE L2 -14 3299 3168 251 152 0 22 chr17 34722150 34722196 -54782357 - MLT1L LTR MaLR -363 252 208 1139 162 35 5 chr17 34722232 34722430 -54782123 + MER20 DNA MER1_type 16 219 0 291 317 97 14 chr17 34722431 34722576 -54781977 - MLT1L LTR MaLR -417 198 42 590 185 140 13 chr17 34722724 34722881 -54781672 - MER69 DNA AcHobo 0 2526 2350 212 274 0 48 chr17 34723684 34723746 -54780807 + MIR SINE MIR 118 176 -86 696 301 42 36 chr17 34723820 34724237 -54780316 + L2 LINE L2 2852 3269 -3 465 225 0 0 chr17 34724701 34724790 -54779763 + MIR SINE MIR 61 149 -59 351 0 0 0 chr17 34725208 34725247 -54779306 + (TG)n Simple_repeat Simple_repeat 1 39 0 4125 130 15 21 chr17 34725372 34726035 -54778518 - Tigger1 DNA MER2_type -355 2063 1405 * 6641 179 41 25 chr17 34726021 34726248 -54778305 - Tigger1 DNA MER2_type -1228 1190 968 1483 180 169 21 chr17 34726248 34726621 -54777932 - MSTA LTR MaLR 0 428 1 6641 179 41 25 chr17 34726621 34727556 -54776997 - Tigger1 DNA MER2_type -1450 968 9 1883 129 7 0 chr17 34727562 34727841 -54776712 + AluJb SINE Alu 4 284 -28 22 35 0 0 chr17 34727841 34727870 -54776683 + AT_rich Low_complexity Low_complexity 1 29 0 395 203 32 98 chr17 34728260 34728383 -54776170 - MIR SINE MIR 0 262 148 337 283 19 36 chr17 34728476 34728633 -54775920 - MIR3 SINE MIR -63 145 1 466 300 69 6 chr17 34728761 34728921 -54775632 + MIR SINE MIR 72 241 -21 2119 98 0 3 chr17 34729238 34729533 -54775020 + AluSc SINE Alu 1 294 -15 210 389 8 24 chr17 34729534 34729660 -54774893 + MER5A DNA MER1_type 65 188 -1 277 256 94 34 chr17 34729774 34729891 -54774662 - L3 LINE CR1 -3 1574 1451 * 454 236 47 0 chr17 34729881 34729987 -54774566 + MIR3 SINE MIR 91 201 -7 350 393 7 0 chr17 34730434 34730579 -54773974 - MIR SINE MIR -25 237 92 205 267 0 0 chr17 34732137 34732182 -54772371 + (TG)n Simple_repeat Simple_repeat 2 46 0 213 121 0 0 chr17 34734032 34734065 -54770488 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 337 253 35 0 chr17 34734699 34734786 -54769767 - MIR SINE MIR -19 243 154 1519 197 59 51 chr17 34734803 34735178 -54769375 + MLT1D LTR MaLR 1 378 -127 249 33 0 0 chr17 34735215 34735245 -54769308 + (A)n Simple_repeat Simple_repeat 1 30 0 632 224 0 7 chr17 34735741 34735884 -54768669 + MLT1D LTR MaLR 364 505 0 254 356 0 5 chr17 34735900 34735993 -54768560 - MIR SINE MIR -116 92 2 202 182 0 0 chr17 34736186 34736219 -54768334 + polypyrimidine Low_complexity Low_complexity 1 33 0 1116 117 21 16 chr17 34736481 34736669 -54767884 + MER53 DNA DNA 1 189 0 216 264 165 58 chr17 34737267 34737388 -54767165 - L2 LINE L2 -2 3311 3178 1469 227 85 56 chr17 34737630 34737861 -54766692 - MLT1F LTR MaLR -2 540 317 2791 3 0 0 chr17 34737861 34738169 -54766384 - AluYa5 SINE Alu -3 308 1 1469 227 85 56 chr17 34738169 34738453 -54766100 - MLT1F LTR MaLR -225 317 10 1547 197 61 83 chr17 34738454 34738926 -54765627 - MLT1C LTR MaLR 0 467 6 679 262 42 23 chr17 34739481 34739788 -54764765 + L1ME3 LINE L1 5650 5956 -206 1061 140 0 29 chr17 34740035 34740206 -54764347 - FRAM SINE Alu 0 166 1 1490 213 3 14 chr17 34740210 34740526 -54764027 - AluJo SINE Alu 0 313 1 569 317 90 50 chr17 34741133 34741632 -54762921 + L2 LINE L2 2377 2895 -419 233 250 19 0 chr17 34741800 34741852 -54762701 + L2 LINE L2 3006 3058 -255 193 308 243 9 chr17 34742043 34742150 -54762403 + L2 LINE L2 3136 3267 -5 345 274 59 39 chr17 34742970 34743123 -54761430 + MIR SINE MIR 107 262 0 1146 164 35 21 chr17 34743252 34743525 -54761028 + MER2 DNA MER2_type 1 315 -30 269 313 30 10 chr17 34744638 34744737 -54759816 - MER91B DNA MER1_type 0 190 90 412 252 84 8 chr17 34744755 34744874 -54759679 - MER91B DNA MER1_type -61 129 2 1207 213 21 21 chr17 34745114 34745401 -54759152 - AluJo SINE Alu -22 290 4 275 302 0 0 chr17 34746132 34746195 -54758358 + MIR SINE MIR 84 146 -62 225 169 0 0 chr17 34746459 34746518 -54758035 + (TTCA)n Simple_repeat Simple_repeat 3 61 0 692 245 25 92 chr17 34746569 34746851 -54757702 + MLT1I LTR MaLR 93 355 -54 364 153 17 0 chr17 34746849 34746908 -54757645 - AluSp SINE Alu -106 197 138 * 819 311 42 0 chr17 34746908 34747149 -54757404 - L2 LINE L2 -230 3083 2833 1429 245 56 80 chr17 34747151 34747269 -54757284 + L1ME3 LINE L1 5173 5292 -870 2538 103 19 8 chr17 34747269 34747629 -54756924 + THE1B LTR MaLR 1 364 0 1429 245 56 80 chr17 34747629 34747707 -54756846 + L1ME3 LINE L1 5292 5370 -792 1353 178 39 45 chr17 34747707 34748016 -54756537 + AluJo SINE Alu 1 307 -5 1429 245 56 80 chr17 34748016 34748560 -54755993 + L1ME3 LINE L1 5370 5901 -261 1886 164 0 0 chr17 34748560 34748853 -54755700 - AluSx SINE Alu -19 293 1 1429 245 56 80 chr17 34748853 34749108 -54755445 + L1ME3 LINE L1 5901 6161 -1 564 295 115 42 chr17 34749148 34749179 -54755374 - L2 LINE L2 -499 2815 2788 2410 115 28 33 chr17 34749179 34749543 -54755010 + THE1B LTR MaLR 1 362 -2 564 295 115 42 chr17 34749543 34750016 -54754537 - L2 LINE L2 -526 2788 2274 258 81 0 0 chr17 34750054 34750091 -54754462 + (CA)n Simple_repeat Simple_repeat 2 38 0 312 285 91 42 chr17 34751356 34751623 -54752930 + MLT1F1 LTR MaLR 201 517 -50 2224 148 89 8 chr17 34752643 34753036 -54751517 + MSTA LTR MaLR 1 425 -3 2392 165 24 21 chr17 34754222 34754647 -54749906 - MSTB LTR MaLR 0 426 1 580 303 41 5 chr17 34754746 34754941 -54749612 + MIR SINE MIR 25 226 -36 183 346 13 0 chr17 34754984 34755062 -54749491 - MIR SINE MIR -108 154 76 24 0 0 0 chr17 34755192 34755216 -54749337 + AT_rich Low_complexity Low_complexity 1 24 0 180 179 0 0 chr17 34756244 34756283 -54748270 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 763 284 28 0 chr17 34757226 34757444 -54747109 + L1MC/D LINE L1 5574 5797 -2011 2061 125 0 4 chr17 34757548 34757829 -54746724 - AluSq SINE Alu -33 280 1 27 49 0 0 chr17 34757972 34758013 -54746540 + AT_rich Low_complexity Low_complexity 1 41 0 495 243 28 0 chr17 34758257 34758364 -54746189 - MER81 DNA DNA -3 111 2 206 267 186 0 chr17 34758481 34758567 -54745986 + MIR SINE MIR 63 164 -98 720 302 200 8 chr17 34758590 34759080 -54745473 + L2 LINE L2 975 1558 -1756 1688 179 47 47 chr17 34759449 34759830 -54744723 + MLT1B LTR MaLR 10 390 0 626 328 139 17 chr17 34759830 34760232 -54744321 + L2 LINE L2 2863 3313 0 226 318 210 9 chr17 34760521 34760754 -54743799 - L3 LINE CR1 -23 1554 1275 213 121 0 0 chr17 34760820 34760853 -54743700 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 186 156 0 0 chr17 34761000 34761032 -54743521 + L2 LINE L2 3282 3313 0 455 270 24 41 chr17 34761788 34761814 -54742739 - L1MA2 LINE L1 -302 5819 5794 370 237 11 0 chr17 34761814 34761907 -54742646 - L1MA10 LINE L1 -1 6333 6240 455 270 24 41 chr17 34761907 34762148 -54742405 - L1MA2 LINE L1 -327 5794 5589 372 281 48 14 chr17 34762444 34762590 -54741963 + MIR SINE MIR 100 250 -12 200 233 17 0 chr17 34762838 34762898 -54741655 + (TAAA)n Simple_repeat Simple_repeat 1 61 0 228 362 184 7 chr17 34763071 34763212 -54741341 - L3 LINE CR1 -37 1540 1375 694 246 58 8 chr17 34763353 34763593 -54740960 + LTR16C LTR ERVL 223 474 -17 293 275 37 22 chr17 34764206 34764311 -54740242 + MIR SINE MIR 5 111 -106 920 107 0 37 chr17 34764687 34764874 -54739679 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 296 96 39 0 chr17 34764875 34764927 -54739626 + GA-rich Low_complexity Low_complexity 3 56 0 2520 113 16 11 chr17 34765307 34765680 -54738873 - THE1C LTR MaLR 0 375 1 1618 185 47 22 chr17 34768163 34768482 -54736071 + L1M4b LINE L1 2 328 -6531 1405 204 50 62 chr17 34768486 34768907 -54735646 + MLT2C2 LTR ERVL 1 416 -48 4208 212 160 12 chr17 34768907 34770142 -54734411 + L1M4b LINE L1 430 1834 -5021 432 231 9 46 chr17 34770145 34770253 -54734300 + L1M4b LINE L1 156 259 -6600 337 197 0 56 chr17 34770253 34770324 -54734229 - MLT2D LTR ERVL -119 295 229 323 253 46 0 chr17 34770305 34770392 -54734161 - MLT2D LTR ERVL -118 296 206 * 1732 249 28 34 chr17 34770393 34771128 -54733425 + L1M4b LINE L1 1859 2723 -4415 233 281 98 0 chr17 34771312 34771394 -54733159 + L1MC4 LINE L1 6614 6703 -1339 228 227 0 82 chr17 34771403 34771513 -54733040 + L1MC4 LINE L1 6603 6703 -1339 360 189 0 0 chr17 34771518 34771592 -54732961 + (TA)n Simple_repeat Simple_repeat 1 74 0 1577 238 88 8 chr17 34771604 34772084 -54732469 + L1M4b LINE L1 3264 3781 -3176 1976 150 10 0 chr17 34772282 34772582 -54731971 - AluJb SINE Alu -9 303 1 205 272 37 56 chr17 34772728 34772853 -54731700 - MIR SINE MIR -87 121 35 465 317 47 29 chr17 34773042 34773212 -54731341 - MIR SINE MIR -65 143 6 228 226 87 70 chr17 34775264 34775379 -54729174 + MIR SINE MIR 36 152 -56 182 297 110 22 chr17 34776499 34776590 -54727963 - MIR3 SINE MIR -28 180 82 219 88 0 0 chr17 34776993 34777027 -54727526 + (TGGGGG)n Simple_repeat Simple_repeat 2 35 0 182 279 105 12 chr17 34777112 34777198 -54727355 - L2 LINE L2 -56 3216 3123 27 29 0 0 chr17 34777269 34777303 -54727250 + AT_rich Low_complexity Low_complexity 1 34 0 4022 147 7 98 chr17 34777467 34778420 -54726133 + L1MC2 LINE L1 5189 6044 -300 1250 67 0 0 chr17 34778521 34778671 -54725882 + AluY SINE Alu 157 306 -5 1588 236 63 16 chr17 34778687 34779115 -54725438 + MLT1D LTR MaLR 58 505 0 1020 222 20 20 chr17 34780492 34780740 -54723813 - MLT1D LTR MaLR 0 505 258 550 159 0 23 chr17 34781033 34781121 -54723432 + AluS SINE Alu 6 91 -222 1600 248 72 39 chr17 34781320 34781859 -54722694 + Zaphod DNA AcHobo 38 558 -3473 198 103 0 0 chr17 34781859 34781888 -54722665 + (TG)n Simple_repeat Simple_repeat 2 30 0 1600 248 72 39 chr17 34781888 34782158 -54722395 + Zaphod DNA AcHobo 558 3509 -522 499 104 0 0 chr17 34782158 34782225 -54722328 + MSTC LTR MaLR 1 67 -361 362 258 80 54 chr17 34782384 34782589 -54721964 + MIR SINE MIR 40 250 -12 1924 134 0 42 chr17 34783249 34783555 -54720998 - AluJo SINE Alu -14 298 6 340 322 4 61 chr17 34783566 34783750 -54720803 - MIR SINE MIR -62 146 13 751 217 7 0 chr17 34783867 34784019 -54720534 + MER117 DNA MER1_type 1 153 -44 545 258 55 82 chr17 34784060 34784389 -54720164 - MLT1J LTR MaLR -191 320 1 349 310 99 0 chr17 34784780 34784922 -54719631 - MIR3 SINE MIR -20 188 33 193 191 21 32 chr17 34785176 34785270 -54719283 + (TG)n Simple_repeat Simple_repeat 1 93 0 2204 132 0 0 chr17 34785443 34785746 -54718807 + AluSx SINE Alu 1 303 -9 1756 178 53 12 chr17 34785750 34786087 -54718466 + MLT1A1 LTR MaLR 10 360 -5 367 93 0 0 chr17 34786095 34786149 -54718404 - MER53 DNA DNA -1 188 135 23 0 0 0 chr17 34786443 34786466 -54718087 + AT_rich Low_complexity Low_complexity 1 23 0 314 265 0 0 chr17 34788099 34788167 -54716386 + MARNA DNA Mariner 317 384 -202 246 307 50 36 chr17 34788243 34788383 -54716170 + MIR SINE MIR 56 197 -65 279 221 12 70 chr17 34788571 34788657 -54715896 + L2 LINE L2 3187 3267 -5 691 285 39 43 chr17 34789339 34789560 -54714993 - MIR SINE MIR -6 256 35 2130 135 0 0 chr17 34789560 34789863 -54714690 - AluSx SINE Alu -9 303 1 691 285 39 43 chr17 34789863 34789897 -54714656 - MIR SINE MIR -227 35 2 382 306 0 9 chr17 34790442 34790550 -54714003 + MIR SINE MIR 46 152 -110 391 307 71 13 chr17 34791408 34791633 -54712920 + L2 LINE L2 2456 2693 -621 1192 246 45 5 chr17 34791636 34792014 -54712539 - L1M4 LINE L1 -872 5274 4882 1659 163 18 7 chr17 34792041 34792318 -54712235 + AluJb SINE Alu 1 280 -32 630 283 111 7 chr17 34792348 34792841 -54711712 + L2 LINE L2 2702 3244 -69 * 797 261 17 13 chr17 34792839 34793069 -54711484 + MIR SINE MIR 14 244 -18 250 246 184 18 chr17 34793347 34793461 -54711092 + MIR3 SINE MIR 48 180 -28 278 286 112 18 chr17 34793711 34793893 -54710660 + MIR SINE MIR 36 232 -30 217 338 0 15 chr17 34793909 34793977 -54710576 + MER5A DNA MER1_type 86 152 -37 1267 172 34 40 chr17 34794059 34794385 -54710168 - MER33 DNA MER1_type 0 324 1 444 250 61 75 chr17 34794569 34794583 -54709970 - MIR SINE MIR -51 211 198 2505 130 5 20 chr17 34794583 34794976 -54709577 + MLT1B LTR MaLR 1 387 -3 444 250 61 75 chr17 34794976 34795173 -54709380 - MIR SINE MIR -64 198 3 303 307 7 44 chr17 34795575 34795712 -54708841 - MIR SINE MIR -109 153 22 21 36 0 0 chr17 34796156 34796184 -54708369 + AT_rich Low_complexity Low_complexity 1 28 0 2540 134 51 5 chr17 34797342 34797520 -54707033 + MSTA LTR MaLR 1 169 -259 6410 75 13 8 chr17 34797520 34798638 -54705915 + L1PA8A LINE L1 5008 6130 -1 2540 134 51 5 chr17 34798638 34798868 -54705685 + MSTA LTR MaLR 169 428 0 260 308 131 8 chr17 34798895 34799025 -54705528 - MIR SINE MIR 0 262 117 351 0 0 0 chr17 34799057 34799096 -54705457 + (CA)n Simple_repeat Simple_repeat 1 39 0 3604 244 74 11 chr17 34799119 34800154 -54704399 + MER69B DNA AcHobo 43 1143 -83 252 215 89 63 chr17 34800201 34800280 -54704273 + MLT2C1 LTR ERVL 277 357 -40 282 91 0 23 chr17 34800326 34800370 -54704183 + MLT2F LTR ERVL 619 661 -2 496 307 96 9 chr17 34800415 34800633 -54703920 - MIR SINE MIR -11 251 15 232 240 40 30 chr17 34800846 34800946 -54703607 - MIR3 SINE MIR -4 204 104 211 229 0 0 chr17 34801291 34801339 -54703214 + (TAA)n Simple_repeat Simple_repeat 2 49 0 1922 156 3 7 chr17 34801394 34801701 -54702852 - AluJo SINE Alu -6 306 1 286 291 86 6 chr17 34801732 34801877 -54702676 - MIR SINE MIR -63 145 2 225 320 149 11 chr17 34802410 34802585 -54701968 + MIR SINE MIR 21 219 -43 195 276 26 26 chr17 34802875 34802951 -54701602 - MIR SINE MIR -34 228 153 238 305 59 34 chr17 34803149 34803267 -54701286 - MIR SINE MIR -110 152 32 373 295 114 20 chr17 34804429 34804578 -54699975 + MIR3 SINE MIR 3 165 -43 622 318 70 16 chr17 34804839 34805097 -54699456 + LTR16A LTR ERVL 170 441 -9 232 362 55 12 chr17 34805849 34806038 -54698515 + MIR3 SINE MIR 5 202 -60 295 350 10 0 chr17 34806393 34806493 -54698060 + MIR SINE MIR 31 131 -77 209 347 42 11 chr17 34806648 34806743 -54697810 + L2 LINE L2 3198 3295 -18 338 355 51 10 chr17 34806770 34806967 -54697586 - L2 LINE L2 -219 3053 2849 366 186 9 18 chr17 34808802 34808915 -54695638 + CT-rich Low_complexity Low_complexity 1 112 0 1368 23 11 6 chr17 34808948 34809125 -54695428 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 508 241 36 0 chr17 34809348 34809460 -54695093 + MER91C DNA MER1_type 5 120 -20 180 250 0 54 chr17 34809934 34809990 -54694563 - MIR SINE MIR -191 71 19 207 261 31 0 chr17 34810172 34810237 -54694316 + MER5A DNA MER1_type 50 116 -73 457 273 171 11 chr17 34810366 34810553 -54694000 - MIR SINE MIR -43 219 3 459 281 83 23 chr17 34811074 34811285 -54693268 + MIR SINE MIR 36 253 -9 645 190 82 92 chr17 34811316 34811500 -54693053 - MER3 DNA MER1_type -6 203 22 579 214 0 0 chr17 34811634 34811732 -54692821 + Tigger3(Golem) DNA MER2_type 2931 3028 -1 231 36 0 0 chr17 34812890 34812918 -54691635 + (T)n Simple_repeat Simple_repeat 1 28 0 1118 133 35 71 chr17 34864630 34864856 -54639697 + MER20 DNA MER1_type 1 218 -1 314 237 0 0 chr17 34865842 34865918 -54638635 + MIR SINE MIR 47 122 -140 285 310 30 0 chr17 34866185 34866285 -54638268 + MER3 DNA MER1_type 52 154 -55 286 171 13 40 chr17 34866307 34866383 -54638170 + MER3 DNA MER1_type 2237 2310 0 660 179 22 71 chr17 34867380 34867564 -54636989 + MER5B DNA MER1_type 4 178 0 313 262 35 90 chr17 34867624 34867769 -54636784 - MIR SINE MIR -68 194 58 321 118 0 0 chr17 34867929 34867980 -54636573 + (CA)n Simple_repeat Simple_repeat 1 51 0 253 263 63 11 chr17 34868605 34868700 -54635853 - MER117 DNA MER1_type -26 171 72 379 287 35 17 chr17 34868774 34868889 -54635664 - MIR SINE MIR -116 146 30 186 287 47 93 chr17 34868956 34869106 -54635447 + L2 LINE L2 2973 3115 -157 239 0 32 0 chr17 34870468 34870499 -54634054 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2545 62 3 0 chr17 34870530 34870839 -54633714 - AluY SINE Alu -1 310 1 508 168 10 10 chr17 34872857 34872958 -54631595 - MIR3 SINE MIR -7 201 101 185 287 108 32 chr17 34873161 34873318 -54631235 - L2 LINE L2 -172 3100 2932 222 91 0 0 chr17 34873443 34873476 -54631077 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 360 261 194 0 chr17 34873511 34873645 -54630908 - MIR SINE MIR -57 205 46 431 230 115 0 chr17 34874158 34874297 -54630256 - MER5B DNA MER1_type -17 161 7 1093 253 97 102 chr17 34874744 34875342 -54629211 - MLT1G1 LTR MaLR 0 595 1 425 265 108 16 chr17 34875441 34875604 -54628949 - MIR SINE MIR -49 213 30 1112 132 35 75 chr17 34875604 34875831 -54628722 + MER20 DNA MER1_type 1 218 -1 425 265 108 16 chr17 34875831 34875852 -54628701 - MIR SINE MIR -232 30 12 314 237 0 0 chr17 34876817 34876893 -54627660 + MIR SINE MIR 47 122 -140 559 244 0 8 chr17 34877160 34877283 -54627270 + MER3 DNA MER1_type 52 126 -83 1270 154 48 74 chr17 34877284 34877596 -54626957 + MER3 DNA MER1_type 2237 2540 0 26 82 0 0 chr17 34877748 34877809 -54626744 + AT_rich Low_complexity Low_complexity 1 61 0 658 218 0 16 chr17 34877820 34877944 -54626609 - FLAM_A SINE Alu -11 122 1 401 247 0 11 chr17 34877944 34878037 -54626516 + MER3 DNA MER1_type 2494 2585 0 307 279 49 16 chr17 34879109 34879231 -54625322 + MIR SINE MIR 51 176 -86 233 297 0 0 chr17 34880128 34880192 -54624361 + MIR SINE MIR 38 101 -107 253 289 9 61 chr17 34880285 34880399 -54624154 - MIR SINE MIR -152 110 3 45 55 0 0 chr17 34881494 34881567 -54622986 + AT_rich Low_complexity Low_complexity 1 73 0 469 282 24 53 chr17 34881578 34881713 -54622840 + MIR SINE MIR 4 132 -130 2227 89 120 3 chr17 34881713 34882039 -54622514 + THE1B LTR MaLR 1 364 0 469 282 24 53 chr17 34882039 34882109 -54622444 + MIR SINE MIR 132 203 -59 378 266 139 6 chr17 34883604 34883762 -54620791 - MIR3 SINE MIR -13 195 17 197 292 15 0 chr17 34884208 34884273 -54620280 + MIR SINE MIR 89 154 -108 2208 95 0 42 chr17 34884441 34884747 -54619806 - AluY SINE Alu -18 293 1 3920 75 6 0 chr17 34884813 34885323 -54619230 - L1PA8 LINE L1 -2 6170 5658 194 337 22 0 chr17 34886005 34886097 -54618456 + MIR SINE MIR 157 250 -12 1991 120 42 0 chr17 34886678 34886962 -54617591 - AluSg SINE Alu -10 300 5 23 68 0 0 chr17 34887012 34887056 -54617497 + AT_rich Low_complexity Low_complexity 1 44 0 300 266 43 106 chr17 34887066 34887254 -54617299 - L3 LINE CR1 -57 1520 1345 1814 102 0 0 chr17 34887658 34887903 -54616650 - L1PA8 LINE L1 -8 6164 5920 2210 113 10 3 chr17 34887933 34888242 -54616311 + AluSx SINE Alu 2 312 0 238 227 11 80 chr17 34889804 34889892 -54614661 + L1MB8 LINE L1 5594 5675 -489 294 261 25 56 chr17 34889990 34890151 -54614402 + L1MB8 LINE L1 5729 5884 -294 293 390 16 0 chr17 34890321 34890444 -54614109 + L2 LINE L2 3144 3268 -4 378 151 0 0 chr17 34890597 34890670 -54613883 + (TG)n Simple_repeat Simple_repeat 2 74 0 1581 193 9 25 chr17 34890880 34891196 -54613357 + AluJb SINE Alu 1 311 -1 306 303 110 18 chr17 34892087 34892196 -54612357 - L2 LINE L2 0 3313 3195 264 274 10 49 chr17 34892251 34892353 -54612200 + MIR SINE MIR 7 104 -158 292 294 34 42 chr17 34892673 34892792 -54611761 - MIR SINE MIR -143 119 2 831 151 16 0 chr17 34892925 34893051 -54611502 - AluJb SINE Alu -182 130 3 25 0 0 0 chr17 34893063 34893088 -54611465 + AT_rich Low_complexity Low_complexity 1 25 0 236 218 26 26 chr17 34893118 34893196 -54611357 + (TA)n Simple_repeat Simple_repeat 1 78 0 1553 140 33 8 chr17 34893222 34893465 -54611088 - AluSx SINE Alu -9 303 55 815 156 0 0 chr17 34893465 34893587 -54610966 - AluJb SINE Alu -190 122 1 292 200 17 0 chr17 34893587 34893647 -54610906 - MIR SINE MIR -76 186 126 325 206 0 0 chr17 34893747 34893810 -54610743 - MIR SINE MIR -99 163 101 2179 123 0 3 chr17 34893816 34894109 -54610444 + AluSg SINE Alu 1 292 -18 558 242 55 6 chr17 34895969 34896134 -54608419 + MER5B DNA MER1_type 1 173 -5 548 188 0 0 chr17 34896199 34896295 -54608258 - MER5A DNA MER1_type -84 105 10 607 165 43 0 chr17 34896696 34896810 -54607743 + LTR50 LTR ERVL 1 119 -676 325 264 23 11 chr17 34896810 34896897 -54607656 - MER81 DNA DNA 0 114 27 276 202 140 53 chr17 34896906 34897020 -54607533 + LTR50 LTR ERVL 109 232 -563 180 0 0 0 chr17 34897040 34897060 -54607493 + (CAG)n Simple_repeat Simple_repeat 1 20 0 461 267 157 13 chr17 34897143 34897379 -54607174 + LTR50 LTR ERVL 526 795 0 211 369 70 0 chr17 34897523 34897680 -54606873 - L2 LINE L2 -180 3092 2925 248 0 31 0 chr17 34898038 34898070 -54606483 + (CA)n Simple_repeat Simple_repeat 2 34 0 338 300 0 0 chr17 34898346 34898416 -54606137 + MER81 DNA DNA 1 70 -44 958 156 0 7 chr17 34899019 34899173 -54605380 - LTR32 LTR ERVL -2 469 317 254 108 0 0 chr17 34899315 34899352 -54605201 - LTR32 LTR ERVL -119 352 316 1701 185 44 47 chr17 34899354 34899695 -54604858 - LTR32 LTR ERVL -122 349 10 571 306 128 29 chr17 34899695 34900281 -54604272 + L3 LINE CR1 822 1465 -112 625 251 56 20 chr17 34900335 34900530 -54604023 + L2 LINE L2 3102 3303 -10 35 54 0 0 chr17 34901463 34901519 -54603034 + AT_rich Low_complexity Low_complexity 1 56 0 547 320 29 37 chr17 34902039 34902283 -54602270 - MIR SINE MIR -7 255 14 290 309 143 6 chr17 34902711 34902879 -54601674 + MIR SINE MIR 1 191 -71 1093 32 0 0 chr17 34903970 34904095 -54600458 - AluY SINE Alu -14 297 173 226 264 75 57 chr17 34904428 34904534 -54600019 + MIR SINE MIR 41 148 -60 245 299 117 15 chr17 34906101 34906238 -54598315 - MIR SINE MIR -49 213 63 577 302 19 15 chr17 34906566 34906771 -54597782 - MIR SINE MIR -51 211 6 401 308 89 14 chr17 34906981 34907195 -54597358 - L2 LINE L2 -482 2832 2603 186 43 0 0 chr17 34907537 34907560 -54596993 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 899 162 132 25 chr17 34908853 34909050 -54595503 - MER20 DNA MER1_type -1 218 1 191 191 71 0 chr17 34910615 34910657 -54593896 - MIR SINE MIR -32 230 186 200 392 108 0 chr17 34910943 34911045 -54593508 + L2 LINE L2 3158 3270 -2 240 320 72 10 chr17 34911075 34911172 -54593381 + MIR SINE MIR 38 140 -68 335 305 80 13 chr17 34912581 34912732 -54591821 + MIR SINE MIR 49 209 -53 345 131 0 0 chr17 34912864 34912925 -54591628 + (ATG)n Simple_repeat Simple_repeat 1 61 0 200 138 0 62 chr17 34913229 34913294 -54591259 + (GGAGAA)n Simple_repeat Simple_repeat 5 65 0 578 277 134 9 chr17 34913361 34913592 -54590961 + MIR SINE MIR 1 260 -2 574 224 6 6 chr17 34913613 34913792 -54590761 + (TAG)n Simple_repeat Simple_repeat 2 180 0 212 349 24 0 chr17 34914819 34914902 -54589651 - MIR3 SINE MIR -34 174 90 182 364 0 0 chr17 34916129 34916206 -54588347 + MIR3 SINE MIR 115 191 -17 232 358 0 0 chr17 34916259 34916326 -54588227 - L2 LINE L2 0 3272 3206 213 311 0 0 chr17 34916597 34916658 -54587895 + GA-rich Low_complexity Low_complexity 1 61 0 1511 167 44 34 chr17 34916927 34917221 -54587332 - AluJo SINE Alu -10 302 6 344 291 182 0 chr17 34917302 34917467 -54587086 + MIR SINE MIR 56 250 -12 266 290 0 0 chr17 34918106 34918168 -54586385 - L2 LINE L2 -42 3230 3169 391 289 107 53 chr17 34918215 34918589 -54585964 + L1ME4a LINE L1 5538 5931 -190 198 171 0 0 chr17 34918697 34918732 -54585821 - MIR SINE MIR -111 151 117 565 103 82 0 chr17 34919649 34919746 -54584807 - L1MA5 LINE L1 0 6300 6196 1312 247 28 32 chr17 34920896 34921135 -54583418 - MER113 DNA MER1_type? -89 432 194 2162 124 3 13 chr17 34921135 34921450 -54583103 - AluSp SINE Alu -1 312 1 1312 247 28 32 chr17 34921450 34921643 -54582910 - MER113 DNA MER1_type? -327 194 2 1235 21 0 0 chr17 34922863 34923005 -54581548 + L1HS LINE L1 6014 6155 0 1064 249 81 42 chr17 34923075 34923508 -54581045 - L1ME3A LINE L1 -95 6075 5626 477 228 84 71 chr17 34923552 34923810 -54580743 - L1ME LINE L1 -306 5860 5596 297 258 60 34 chr17 34924602 34924774 -54579779 - MIR SINE MIR -59 149 9 339 25 0 0 chr17 34925421 34925461 -54579092 + (TG)n Simple_repeat Simple_repeat 1 40 0 797 236 6 0 chr17 34925461 34925618 -54578935 - MER58A DNA MER1_type -25 199 42 4293 183 38 22 chr17 34925619 34926022 -54578531 + L1MB8 LINE L1 4918 5313 -865 1830 167 0 3 chr17 34926022 34926309 -54578244 + AluJo SINE Alu 1 286 -26 186 43 0 0 chr17 34926312 34926335 -54578218 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4293 183 38 22 chr17 34926335 34927161 -54577392 + L1MB8 LINE L1 5314 6173 -5 282 207 0 35 chr17 34927174 34927232 -54577321 - MER58A DNA MER1_type -168 56 1 183 387 54 9 chr17 34927242 34927353 -54577200 - L2 LINE L2 -40 3232 3117 234 0 0 0 chr17 34927466 34927492 -54577061 + (T)n Simple_repeat Simple_repeat 1 26 0 187 338 0 13 chr17 34927508 34927585 -54576968 - L2 LINE L2 -614 2700 2625 23 0 0 0 chr17 34927617 34927640 -54576913 + AT_rich Low_complexity Low_complexity 1 23 0 340 287 61 0 chr17 34927989 34928104 -54576449 + MIR SINE MIR 125 246 -16 248 296 17 43 chr17 34929637 34929752 -54574801 - L2 LINE L2 0 3272 3161 3193 159 7 25 chr17 34929752 34930349 -54574204 + LTR60 LTR ERV1 1 586 0 470 214 9 56 chr17 34930733 34930916 -54573637 + MIR SINE MIR 38 210 -52 1013 136 38 16 chr17 34931820 34932004 -54572549 - MER53 DNA DNA 0 189 2 219 235 20 0 chr17 34932699 34932750 -54571803 + L2 LINE L2 3261 3312 -1 25 0 0 0 chr17 34933523 34933548 -54571005 + AT_rich Low_complexity Low_complexity 1 25 0 296 298 90 56 chr17 34933567 34933745 -54570808 + MIR SINE MIR 8 191 -71 386 269 59 38 chr17 34934020 34934206 -54570347 - MIR SINE MIR -25 237 48 44174 46 6 1 chr17 34934654 34940768 -54563785 + L1PA4 LINE L1 1 6147 -8 198 0 0 0 chr17 34940787 34940809 -54563744 + (TGAA)n Simple_repeat Simple_repeat 4 25 0 516 217 47 23 chr17 34941415 34941544 -54563009 - MIR SINE MIR -126 136 5 476 254 103 63 chr17 34941609 34941977 -54562576 + LTR33 LTR ERVL 38 456 -65 387 263 17 0 chr17 34942796 34942914 -54561639 + MIR SINE MIR 132 251 -11 268 335 65 27 chr17 34943002 34943187 -54561366 - MIR SINE MIR -51 211 20 191 381 0 0 chr17 34943236 34943299 -54561254 + L2 LINE L2 3000 3062 -210 211 350 32 32 chr17 34943419 34943542 -54561011 + L2 LINE L2 3133 3255 -17 425 252 66 64 chr17 34943553 34943865 -54560688 - MLT1I LTR MaLR -2 407 59 183 80 0 0 chr17 34944025 34944050 -54560503 + (CA)n Simple_repeat Simple_repeat 2 26 0 374 294 216 0 chr17 34944281 34944434 -54560119 + MER5A DNA MER1_type 4 189 0 257 292 101 77 chr17 34944741 34945077 -54559476 - L2 LINE L2 -12 3260 2917 259 189 38 0 chr17 34945368 34945421 -54559132 + Tigger5 DNA MER2_type 1 55 -2268 454 211 0 22 chr17 34945482 34945572 -54558981 - Tigger5 DNA MER2_type -2235 88 1 516 165 0 12 chr17 34945585 34945670 -54558883 + Tigger5 DNA MER2_type 2239 2322 -1 285 267 0 50 chr17 34945709 34945810 -54558743 - L2 LINE L2 -181 3091 2996 545 216 0 16 chr17 34946690 34946815 -54557738 - MIR3 SINE MIR 0 208 86 186 298 83 24 chr17 34947318 34947402 -54557151 - L2 LINE L2 -39 3233 3145 888 209 30 0 chr17 34947562 34947763 -54556790 - MER3 DNA MER1_type -1 208 2 253 319 174 0 chr17 34947943 34948150 -54556403 - MIR SINE MIR -6 256 14 851 305 53 30 chr17 34949567 34949960 -54554593 - L2 LINE L2 -16 3297 2896 400 252 106 8 chr17 34950834 34950957 -54553596 + MIR SINE MIR 12 146 -116 469 340 16 10 chr17 34950969 34951163 -54553390 + MER117 DNA MER1_type 1 195 -2 387 105 0 0 chr17 34951846 34951903 -54552650 + (TG)n Simple_repeat Simple_repeat 2 58 0 445 271 57 29 chr17 34952047 34952187 -54552366 + MIR SINE MIR 13 156 -106 206 339 21 23 chr17 34952527 34952622 -54551931 + MIR SINE MIR 27 122 -86 1852 133 0 0 chr17 34952673 34952943 -54551610 - AluSx SINE Alu -4 308 39 690 265 14 39 chr17 34953331 34953548 -54551005 + MIR SINE MIR 3 212 -50 285 344 49 8 chr17 34954898 34955020 -54549533 + L2 LINE L2 3145 3271 -1 255 246 27 82 chr17 34955161 34955271 -54549282 - MARNA DNA Mariner -92 494 391 1429 231 53 11 chr17 34955670 34955739 -54548814 - L1MD3 LINE L1 -11 7984 7919 2153 106 0 3 chr17 34955739 34956040 -54548513 - AluY SINE Alu -11 300 1 1429 231 53 11 chr17 34956040 34956330 -54548223 - L1MD3 LINE L1 -76 7919 7610 703 47 0 0 chr17 34956565 34956650 -54547903 + AluY SINE Alu 215 299 -12 279 309 0 0 chr17 34956650 34956731 -54547822 + MARNA DNA Mariner 397 477 -109 396 175 25 12 chr17 34956867 34956947 -54547606 - L1MD3 LINE L1 -278 7717 7637 300 266 0 0 chr17 34957380 34957444 -54547109 + MER91 DNA MER1_type 77 140 0 209 323 111 10 chr17 34959012 34959111 -54545442 - L2 LINE L2 -26 3246 3138 198 395 0 0 chr17 34959148 34959224 -54545329 + MIR3 SINE MIR 133 208 0 372 270 95 0 chr17 34959698 34959835 -54544718 + LTR67 LTR ERVL 401 550 -7 541 183 98 46 chr17 34960950 34961103 -54543450 - MER103 DNA DNA -2 164 4 2425 77 3 0 chr17 34961389 34961701 -54542852 + AluSp SINE Alu 1 313 0 549 263 160 0 chr17 34961741 34961897 -54542656 + MER5A DNA MER1_type 9 189 0 480 303 67 0 chr17 34961907 34962072 -54542481 - MER5B DNA MER1_type -2 176 1 216 0 0 0 chr17 34962652 34962676 -54541877 + (T)n Simple_repeat Simple_repeat 1 24 0 250 290 0 16 chr17 34962739 34962801 -54541752 - MIR SINE MIR -182 80 20 1298 149 73 120 chr17 34963320 34963636 -54540917 - AluJb SINE Alu -1 301 1 222 279 0 39 chr17 34965906 34966010 -54538543 + GA-rich Low_complexity Low_complexity 2 101 0 189 383 21 0 chr17 34966292 34966386 -54538167 + L2 LINE L2 3208 3303 -10 1019 293 0 0 chr17 34967400 34967632 -54536921 + MIR SINE MIR 29 260 -2 399 232 320 31 chr17 34967752 34967946 -54536607 - MIR SINE MIR 0 262 13 707 344 59 11 chr17 34967960 34968230 -54536323 + L2 LINE L2 3025 3307 -6 184 234 52 13 chr17 34968326 34968403 -54536150 - L2 LINE L2 -252 3061 2982 423 295 68 14 chr17 34968754 34968961 -54535592 - MLT1J LTR MaLR -1 510 293 433 274 19 9 chr17 34969032 34969138 -54535415 - MLT1J LTR MaLR -332 179 73 2160 102 13 0 chr17 34969368 34969671 -54534882 + AluSp SINE Alu 1 307 -6 1658 132 49 3 chr17 34969721 34970030 -54534523 + AluSx SINE Alu 1 312 0 2192 73 7 0 chr17 34970207 34970494 -54534059 + AluSp SINE Alu 1 289 -24 194 0 0 37 chr17 34970504 34970531 -54534022 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 328 310 30 0 chr17 34970680 34970780 -54533773 + MIR SINE MIR 160 262 0 461 276 52 8 chr17 34971335 34971469 -54533084 - MIR SINE MIR -13 249 110 407 274 0 19 chr17 34972136 34972242 -54532311 - MIR SINE MIR -127 135 32 202 287 135 54 chr17 34972875 34973209 -54531344 + L2 LINE L2 1556 1916 -1398 685 278 128 62 chr17 34973717 34974091 -54530462 + MLT1K LTR MaLR 190 588 0 275 297 118 17 chr17 34974271 34974405 -54530148 + MIR SINE MIR 1 146 -62 319 191 0 59 chr17 34975225 34975293 -54529260 - L2 LINE L2 -8 3264 3201 384 119 0 0 chr17 34975366 34975425 -54529128 + (CA)n Simple_repeat Simple_repeat 2 60 0 231 167 0 0 chr17 34975456 34975498 -54529055 + (CA)n Simple_repeat Simple_repeat 1 42 0 208 360 22 7 chr17 34975608 34975744 -54528809 + L2 LINE L2 2918 3055 -217 180 300 0 0 chr17 34975877 34975917 -54528636 + L2 LINE L2 3186 3225 -47 5982 94 16 51 chr17 34976845 34978231 -54526322 + L1PA16 LINE L1 4809 6157 -9 328 320 0 0 chr17 34978469 34978572 -54525981 + MIR SINE MIR 155 257 -5 626 284 92 5 chr17 34978658 34978876 -54525677 + MIR SINE MIR 8 244 -18 222 284 40 0 chr17 34979560 34979634 -54524919 - MIR3 SINE MIR -53 155 79 237 344 11 11 chr17 34979694 34979787 -54524766 + MIR SINE MIR 54 146 -116 336 102 0 0 chr17 34979788 34979837 -54524716 + (TTCC)n Simple_repeat Simple_repeat 3 51 0 225 358 11 11 chr17 34979849 34979944 -54524609 - MER81 DNA DNA 0 114 20 344 270 0 0 chr17 34979972 34980046 -54524507 - L2 LINE L2 -50 3263 3190 340 319 96 31 chr17 34980090 34980319 -54524234 - MIR SINE MIR -3 259 16 293 244 232 0 chr17 34980887 34980969 -54523584 - MIR3 SINE MIR -26 182 82 313 241 58 138 chr17 34981430 34981680 -54522873 + MIR SINE MIR 2 250 -12 314 227 100 57 chr17 34982625 34982784 -54521769 + MIR3 SINE MIR 8 183 -55 336 247 37 0 chr17 34983720 34983801 -54520752 - MIR SINE MIR -26 236 153 3342 124 4 17 chr17 34983801 34984318 -54520235 - Tigger4(Zombi) DNA MER2_type 0 2731 2222 937 152 0 33 chr17 34984346 34984442 -54520111 - Tigger4(Zombi) DNA MER2_type -2585 146 55 1974 128 0 7 chr17 34984442 34984738 -54519815 - AluSx SINE Alu -18 294 1 937 152 0 33 chr17 34984738 34984792 -54519761 - Tigger4(Zombi) DNA MER2_type -2676 55 1 1528 247 8 22 chr17 34984804 34985172 -54519381 + MLT1A1 LTR MaLR 3 365 0 461 225 36 9 chr17 34985172 34985283 -54519270 - MIR SINE MIR -107 155 42 926 67 0 0 chr17 34988402 34988567 -54515986 - AluY SINE Alu 0 325 161 1936 171 90 43 chr17 34988596 34989063 -54515490 - LTR2B LTR ERV1 0 490 2 1509 161 41 32 chr17 34989719 34989931 -54514622 + MER33 DNA MER1_type 6 214 -2371 2129 109 3 31 chr17 34989931 34990251 -54514302 + AluSp SINE Alu 1 311 -2 189 0 0 0 chr17 34990251 34990272 -54514281 + (TA)n Simple_repeat Simple_repeat 2 22 0 1509 161 41 32 chr17 34990272 34990374 -54514179 + MER33 DNA MER1_type 213 324 0 673 231 230 48 chr17 34990463 34990944 -54513609 + L2 LINE L2 2714 3308 -5 389 290 24 96 chr17 34991287 34991621 -54512932 - L3 LINE CR1 -6 1571 1262 414 269 39 113 chr17 34991865 34992121 -54512432 - L2 LINE L2 -9 3263 3027 621 290 92 66 chr17 34992593 34992986 -54511567 + L2 LINE L2 2870 3272 0 465 313 60 37 chr17 34993080 34993297 -54511256 - MIR SINE MIR -33 229 8 587 247 13 13 chr17 34993466 34993616 -54510937 + MIR SINE MIR 61 210 -52 286 263 123 9 chr17 34994214 34994328 -54510225 + MIR3 SINE MIR 78 204 -4 236 285 133 35 chr17 34994323 34994468 -54510085 + MIR SINE MIR 82 249 -13 * 1954 123 11 0 chr17 34994623 34994908 -54509645 - AluSx SINE Alu -24 288 1 353 280 280 12 chr17 34994940 34995197 -54509356 - L1ME4a LINE L1 0 6121 5796 308 352 119 0 chr17 34995993 34996186 -54508367 - MIR SINE MIR 0 262 47 293 335 37 50 chr17 34996758 34996919 -54507634 - MIR3 SINE MIR -44 164 6 * 324 286 92 17 chr17 34996904 34997023 -54507530 - MIR3 SINE MIR -46 162 35 339 25 0 0 chr17 34998040 34998080 -54506473 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 338 282 129 52 chr17 34998104 34998352 -54506201 - L2 LINE L2 -46 3267 3001 260 378 22 18 chr17 34998447 34998672 -54505881 - L2 LINE L2 -499 2815 2590 554 272 69 29 chr17 34999851 35000024 -54504529 - MIR3 SINE MIR -10 198 19 415 274 89 7 chr17 35000530 35000665 -54503888 - MIR SINE MIR -70 192 47 225 228 30 89 chr17 35000978 35001079 -54503474 - MIR SINE MIR -72 190 96 180 0 0 0 chr17 35001202 35001222 -54503331 + (A)n Simple_repeat Simple_repeat 1 20 0 398 312 36 29 chr17 35001250 35001388 -54503165 - MIR SINE MIR -15 247 109 338 357 103 23 chr17 35001407 35001805 -54502748 - L1MEd LINE L1 -5368 751 322 240 303 78 64 chr17 35002597 35002815 -54501738 + MIR SINE MIR 21 241 -21 351 294 48 32 chr17 35004011 35004137 -54500416 - L2 LINE L2 0 3272 3145 342 298 30 30 chr17 35004991 35005122 -54499431 - L2 LINE L2 -220 3052 2922 286 347 58 28 chr17 35005430 35005622 -54498931 - MIR SINE MIR -44 218 25 255 170 21 0 chr17 35005936 35005983 -54498570 - L3 LINE CR1 -5 1572 1525 409 291 27 67 chr17 35006101 35006342 -54498211 + MIR SINE MIR 13 248 -14 1335 231 47 3 chr17 35006373 35006671 -54497882 - MER58B DNA MER1_type 0 341 31 514 297 18 12 chr17 35007195 35007360 -54497193 + MIR SINE MIR 97 262 0 199 348 36 27 chr17 35008155 35008267 -54496286 - MIR SINE MIR -75 133 21 276 320 118 26 chr17 35008516 35008669 -54495884 + MIR SINE MIR 32 198 -64 * 853 306 0 16 chr17 35008665 35008907 -54495646 - MIR SINE MIR 0 262 25 2087 112 0 34 chr17 35009082 35009403 -54495150 - AluSx SINE Alu -2 310 1 319 266 9 44 chr17 35009472 35009585 -54494968 + L1ME3A LINE L1 6062 6170 0 396 270 51 22 chr17 35009598 35009776 -54494777 + L1MC4 LINE L1 7860 8042 0 240 255 0 0 chr17 35010235 35010286 -54494267 + L2 LINE L2 3016 3066 -247 182 286 60 12 chr17 35010333 35010417 -54494136 + MIR SINE MIR 129 216 -46 350 296 43 0 chr17 35010741 35010856 -54493697 - MIR SINE MIR -58 204 85 344 188 43 29 chr17 35011679 35011748 -54492805 - L2 LINE L2 -3 3310 3241 316 294 169 22 chr17 35012537 35012721 -54491832 + MIR SINE MIR 33 243 -19 1527 284 9 39 chr17 35014735 35015107 -54489446 + LTR16A LTR ERVL 1 358 -92 1917 104 7 55 chr17 35015107 35015415 -54489138 - AluSc SINE Alu -16 293 1 1527 284 9 39 chr17 35015415 35015506 -54489047 + LTR16A LTR ERVL 358 450 0 461 349 35 12 chr17 35015579 35015748 -54488805 - MIR SINE MIR -70 192 20 390 229 0 0 chr17 35015769 35015865 -54488688 + GA-rich Low_complexity Low_complexity 3 98 0 821 248 58 16 chr17 35015875 35016117 -54488436 - MIR SINE MIR -5 257 6 287 380 30 0 chr17 35016793 35016893 -54487660 + L2 LINE L2 2951 3053 -219 339 265 0 0 chr17 35016938 35017006 -54487547 + MIR SINE MIR 57 124 -138 283 250 0 0 chr17 35017132 35017188 -54487365 + L2 LINE L2 3258 3313 0 21 0 0 0 chr17 35017519 35017540 -54487013 + AT_rich Low_complexity Low_complexity 1 21 0 1079 179 32 32 chr17 35017891 35018109 -54486444 + MER20 DNA MER1_type 1 218 -1 209 242 61 15 chr17 35018725 35018791 -54485762 - MIR SINE MIR -70 192 124 377 253 13 0 chr17 35019567 35019646 -54484907 - MER5A DNA MER1_type -97 92 13 311 176 162 0 chr17 35019833 35019907 -54484646 + MER103 DNA DNA 1 86 -80 943 261 65 70 chr17 35019990 35020449 -54484104 + L2 LINE L2 2849 3305 -8 371 230 50 20 chr17 35020876 35020976 -54483577 - MIR SINE MIR -65 197 95 557 240 112 66 chr17 35021153 35021349 -54483204 - MIR SINE MIR 0 262 58 342 286 71 7 chr17 35021646 35021786 -54482767 - MIR3 SINE MIR -30 178 30 333 47 0 0 chr17 35021806 35021849 -54482704 + (CCAA)n Simple_repeat Simple_repeat 4 46 0 367 289 16 33 chr17 35022148 35022269 -54482284 - L2 LINE L2 -191 3081 2963 204 261 0 0 chr17 35022401 35022447 -54482106 - L2 LINE L2 -11 3261 3216 1808 107 50 36 chr17 35022455 35022736 -54481817 + THE1B LTR MaLR 80 364 0 652 268 54 60 chr17 35022949 35023263 -54481290 + LTR16A1 LTR ERVL 146 457 0 246 348 118 14 chr17 35024010 35024297 -54480256 - L2 LINE L2 -666 2648 2332 560 191 213 20 chr17 35024314 35024519 -54480034 + MIR SINE MIR 18 252 -10 22 0 0 0 chr17 35024522 35024544 -54480009 + AT_rich Low_complexity Low_complexity 1 22 0 185 270 240 0 chr17 35024765 35024865 -54479688 - L2 LINE L2 -13 3259 3136 471 295 47 42 chr17 35025380 35025570 -54478983 - MIR3 SINE MIR -15 193 3 217 281 167 9 chr17 35026148 35026262 -54478291 + MIR3 SINE MIR 2 133 -75 359 271 65 9 chr17 35026897 35027004 -54477549 + MLT1L LTR MaLR 433 545 -70 276 279 79 14 chr17 35027097 35027237 -54477316 + L1ME4a LINE L1 5711 5859 -262 432 305 44 55 chr17 35027367 35027639 -54476914 + L1ME4a LINE L1 5852 6120 -1 316 248 26 68 chr17 35029431 35029548 -54475005 - MIR SINE MIR -110 152 41 2197 254 111 8 chr17 35029624 35030343 -54474210 + LTR50 LTR ERVL 1 793 -2 23 0 0 0 chr17 35030369 35030392 -54474161 + AT_rich Low_complexity Low_complexity 1 23 0 228 125 18 107 chr17 35030436 35030492 -54474061 + L2 LINE L2 3263 3313 0 2596 111 8 0 chr17 35031726 35032087 -54472466 - THE1B LTR MaLR 0 364 1 10390 99 36 48 chr17 35032087 35033686 -54470867 - THE1B-int LTR MaLR 0 1580 1 2095 164 45 33 chr17 35033687 35034230 -54470323 - MLT2A2 LTR ERVL -1 553 3 1196 300 96 30 chr17 35034233 35034773 -54469780 + MLT1K LTR MaLR 10 585 -3 331 328 167 20 chr17 35034858 35035134 -54469419 + L2 LINE L2 2728 3036 -236 189 217 171 85 chr17 35035192 35035321 -54469232 + L2 LINE L2 3174 3313 0 226 260 0 0 chr17 35036659 35036709 -54467844 - L2 LINE L2 -219 3053 3004 213 143 0 29 chr17 35036708 35036743 -54467810 + L2 LINE L2 3258 3291 -22 * 180 229 62 0 chr17 35037213 35037261 -54467292 + L2 LINE L2 3004 3054 -218 358 258 47 55 chr17 35037425 35037553 -54467000 - MIR SINE MIR -122 140 14 279 235 175 0 chr17 35037773 35037917 -54466636 - MIR3 SINE MIR 0 208 35 201 183 28 28 chr17 35037946 35038017 -54466536 + (TTATA)n Simple_repeat Simple_repeat 5 75 0 298 319 106 9 chr17 35038240 35038353 -54466200 + MIR SINE MIR 19 142 -66 446 292 97 0 chr17 35038404 35038548 -54466005 - MER117 DNA MER1_type -33 164 7 196 231 209 22 chr17 35039161 35039252 -54465301 + MIR SINE MIR 21 128 -80 557 299 70 6 chr17 35039523 35039680 -54464873 - MIR SINE MIR -95 167 1 629 254 0 36 chr17 35039965 35040130 -54464423 - MIR SINE MIR -96 166 8 539 261 83 24 chr17 35040607 35040802 -54463751 + MIR SINE MIR 12 213 -49 289 239 45 23 chr17 35040970 35041058 -54463495 - MIR SINE MIR -70 192 103 1456 211 3 20 chr17 35041587 35041886 -54462667 - AluJb SINE Alu -18 294 1 240 235 73 0 chr17 35042100 35042168 -54462385 - MIR SINE MIR -34 228 156 791 186 0 32 chr17 35042181 35042337 -54462216 + MER45A DNA AcHobo 28 178 0 287 200 100 14 chr17 35042337 35042407 -54462146 - MIR SINE MIR -97 165 90 328 273 70 23 chr17 35043369 35043497 -54461056 - MER5B DNA MER1_type -41 137 4 229 153 0 119 chr17 35043635 35043694 -54460859 + L2 LINE L2 3221 3272 0 1247 256 92 24 chr17 35043779 35044233 -54460320 - LTR16C LTR ERVL -2 489 5 1279 156 33 0 chr17 35044417 35044629 -54459924 - MER20 DNA MER1_type 0 219 1 248 224 0 0 chr17 35045769 35045818 -54458735 + (CA)n Simple_repeat Simple_repeat 1 49 0 180 348 174 0 chr17 35046053 35046145 -54458408 - MIR SINE MIR -74 134 27 228 341 8 48 chr17 35046325 35046451 -54458102 - MIR SINE MIR -42 220 100 188 320 50 50 chr17 35046554 35046654 -54457899 + L2 LINE L2 3208 3307 -6 226 239 56 14 chr17 35047240 35047311 -54457242 + MIR3 SINE MIR 89 162 -46 193 328 0 0 chr17 35048417 35048478 -54456075 + MIR3 SINE MIR 117 177 -31 343 410 11 6 chr17 35048519 35048697 -54455856 + MIR3 SINE MIR 16 194 -14 393 22 0 0 chr17 35048953 35048999 -54455554 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 1092 252 6 55 chr17 35049152 35049477 -54455076 + L2 LINE L2 3005 3313 0 263 361 49 8 chr17 35049690 35049812 -54454741 + L2 LINE L2 3145 3271 -1 255 246 27 82 chr17 35049955 35050065 -54454488 - MARNA DNA Mariner -92 494 391 851 270 58 14 chr17 35050465 35050537 -54454016 - L1MD3 LINE L1 -11 7984 7917 1821 159 0 10 chr17 35050537 35050851 -54453702 - AluY SINE Alu 0 311 1 851 270 58 14 chr17 35050851 35051056 -54453497 - L1MD3 LINE L1 -78 7917 7695 401 130 29 0 chr17 35251066 35251135 -54253418 - LTR56 LTR ERV1 -178 267 197 471 222 104 52 chr17 35251555 35251767 -54252786 + L1ME3 LINE L1 5937 6159 -3 308 336 32 24 chr17 35252338 35252463 -54252090 + MIR3 SINE MIR 30 155 -53 405 288 62 23 chr17 35252470 35252647 -54251906 + MER117 DNA MER1_type 3 186 -11 207 360 93 7 chr17 35253758 35253897 -54250656 - MIR3 SINE MIR -2 206 56 360 279 18 9 chr17 35254198 35254309 -54250244 - MIR3 SINE MIR -48 160 49 836 273 45 4 chr17 35255293 35255535 -54249018 - MLT1I LTR MaLR -155 254 3 841 120 0 0 chr17 35256495 35256612 -54247941 - FLAM_C SINE Alu -12 121 5 584 225 27 0 chr17 35257006 35257117 -54247436 - MER81 DNA DNA 0 114 1 204 241 0 0 chr17 35257202 35257260 -54247293 + (TA)n Simple_repeat Simple_repeat 1 58 0 316 298 51 19 chr17 35257261 35257476 -54247077 - L1ME4a LINE L1 -158 5963 5742 31 44 0 0 chr17 35257476 35257521 -54247032 + AT_rich Low_complexity Low_complexity 1 45 0 2063 114 29 0 chr17 35257666 35257946 -54246607 + AluSx SINE Alu 1 288 -24 239 170 43 0 chr17 35257953 35258000 -54246553 + MLT1E2 LTR MaLR 19 67 -559 1541 282 81 27 chr17 35258184 35258702 -54245851 + MLT1E2 LTR MaLR 81 626 0 525 225 130 10 chr17 35258754 35258954 -54245599 + L1ME3 LINE L1 5938 6161 -1 26 0 0 0 chr17 35259088 35259114 -54245439 + AT_rich Low_complexity Low_complexity 1 26 0 309 224 190 9 chr17 35259936 35260052 -54244501 + MIR SINE MIR 8 144 -118 317 293 33 40 chr17 35261174 35261324 -54243229 + MER5A DNA MER1_type 38 186 -3 224 274 23 11 chr17 35262096 35262213 -54242340 - MIR SINE MIR -62 146 33 1989 216 52 25 chr17 35263566 35264047 -54240506 + MER9 LTR ERVK 18 511 0 1650 186 7 0 chr17 35264048 35264323 -54240230 - AluJb SINE Alu -35 277 1 260 244 37 12 chr17 35266348 35266430 -54238123 + MIR SINE MIR 164 247 -15 312 297 70 8 chr17 35267584 35267712 -54236841 - MIR SINE MIR -35 227 92 244 268 32 70 chr17 35267895 35268015 -54236538 + MER5A DNA MER1_type 62 175 -3 578 247 17 56 chr17 35268268 35268446 -54236107 + LTR16A LTR ERVL 104 274 -176 951 319 67 50 chr17 35268593 35269379 -54235174 + HERVL LTR ERVL 3042 3841 -1813 43474 33 23 1 chr17 35269380 35275382 -54229171 + L1PA2 LINE L1 22 6155 0 1310 350 33 31 chr17 35275709 35276824 -54227729 + HERVL LTR ERVL 4201 5324 -161 737 293 70 29 chr17 35276980 35277294 -54227259 + LTR16A LTR ERVL 17 343 -107 489 292 0 22 chr17 35278879 35279016 -54225537 - MER94 DNA DNA 0 134 1 39 0 0 0 chr17 35279995 35280034 -54224519 + AT_rich Low_complexity Low_complexity 1 39 0 655 309 42 58 chr17 35281025 35281407 -54223146 + MLT1I LTR MaLR 1 376 -33 308 206 111 56 chr17 35283137 35283263 -54221290 + MER117 DNA MER1_type 23 155 -42 546 330 55 0 chr17 35283429 35283647 -54220906 + MIR SINE MIR 33 262 0 2061 149 0 3 chr17 35283666 35283968 -54220585 + AluSx SINE Alu 1 301 -11 30354 109 12 13 chr17 35284647 35290425 -54214128 - L1PA7 LINE L1 0 6469 680 261 163 0 0 chr17 35290427 35290476 -54214077 + A-rich Low_complexity Low_complexity 1 49 0 295 289 86 8 chr17 35290985 35291113 -54213440 - MIR SINE MIR -32 230 93 33 25 0 0 chr17 35291177 35291217 -54213336 + AT_rich Low_complexity Low_complexity 1 40 0 1659 168 21 7 chr17 35291217 35291508 -54213045 - AluJo SINE Alu -17 295 1 489 296 137 51 chr17 35291613 35291964 -54212589 - MLT1J2 LTR MaLR -3 447 67 1447 75 0 0 chr17 35292358 35292546 -54212007 + L1PA6 LINE L1 5967 6154 0 689 78 0 10 chr17 35292915 35293017 -54211536 + (TTCTCC)n Simple_repeat Simple_repeat 2 102 0 490 277 236 34 chr17 35293551 35293843 -54210710 - MLT1J2 LTR MaLR -33 417 67 182 292 50 67 chr17 35294044 35294164 -54210389 + MER5A DNA MER1_type 48 165 -24 2309 177 72 5 chr17 35294619 35295049 -54209504 + LTR24 LTR ERV1 8 466 -1 24 32 0 0 chr17 35295846 35295877 -54208676 + AT_rich Low_complexity Low_complexity 1 31 0 188 276 95 35 chr17 35297246 35297362 -54207191 + MIR SINE MIR 19 141 -67 325 181 24 60 chr17 35298140 35298223 -54206330 - MLT1G1 LTR MaLR 0 595 516 357 24 0 0 chr17 35298331 35298373 -54206180 + (TG)n Simple_repeat Simple_repeat 1 42 0 328 218 26 0 chr17 35298428 35298506 -54206047 - MLT1J2 LTR MaLR -501 89 10 200 111 67 44 chr17 35299230 35299275 -54205278 + T-rich Low_complexity Low_complexity 2 47 0 22 0 0 0 chr17 35299691 35299713 -54204840 + AT_rich Low_complexity Low_complexity 1 22 0 960 250 177 26 chr17 35299729 35300642 -54203911 - L1M4 LINE L1 -3748 2634 1560 * 1792 155 30 0 chr17 35300637 35300934 -54203619 + L1MB1 LINE L1 5688 5993 -175 236 289 74 52 chr17 35300984 35301119 -54203434 + MER117 DNA MER1_type 16 153 -44 414 283 57 28 chr17 35301334 35301511 -54203042 + MIR SINE MIR 81 262 0 249 301 14 14 chr17 35301812 35301885 -54202668 + MLT1I LTR MaLR 95 167 -242 600 198 0 0 chr17 35302025 35302131 -54202422 + L1MD3 LINE L1 7880 7985 -10 * 8844 201 35 30 chr17 35302107 35304091 -54200462 + L1MB2 LINE L1 2922 4895 -1276 2421 65 7 0 chr17 35304091 35304384 -54200169 + AluSp SINE Alu 2 296 -17 8844 201 35 30 chr17 35304384 35304513 -54200040 + L1MB2 LINE L1 4895 5022 -1149 2124 139 3 0 chr17 35304513 35304807 -54199746 - AluSq SINE Alu -18 295 1 8844 201 35 30 chr17 35304807 35305025 -54199528 + L1MB2 LINE L1 5022 5237 -934 2022 144 3 3 chr17 35305025 35305324 -54199229 + AluSq SINE Alu 1 299 -14 8844 201 35 30 chr17 35305324 35306213 -54198340 + L1MB2 LINE L1 5237 6164 -7 1914 194 63 73 chr17 35307541 35307567 -54196986 + MLT1D LTR MaLR 21 46 -459 2278 107 30 0 chr17 35307567 35307866 -54196687 + AluSx SINE Alu 1 308 -4 1914 194 63 73 chr17 35307866 35308329 -54196224 + MLT1D LTR MaLR 46 505 0 804 180 20 0 chr17 35308329 35308479 -54196074 + MLT1D-int LTR MaLR 1 153 -1218 210 238 12 88 chr17 35309684 35309764 -54194789 + L2 LINE L2 2564 2637 -677 526 245 61 0 chr17 35313164 35313311 -54191242 - MIR SINE MIR -20 242 87 303 215 103 19 chr17 35315880 35315987 -54188566 - MIR3 SINE MIR -11 197 82 357 161 37 0 chr17 35317026 35317107 -54187446 - MER5A DNA MER1_type -78 111 28 194 196 130 0 chr17 35317353 35317399 -54187154 + MER5A DNA MER1_type 52 103 -86 2287 118 0 0 chr17 35317408 35317714 -54186839 - AluSx SINE Alu -6 306 1 462 266 67 10 chr17 35317942 35318140 -54186413 + MIR SINE MIR 3 211 -51 242 282 26 0 chr17 35318562 35318640 -54185913 + L2 LINE L2 3230 3309 -4 263 221 130 13 chr17 35319297 35319374 -54185179 + L2 LINE L2 3211 3296 -17 402 85 0 0 chr17 35319522 35319581 -54184972 + (TG)n Simple_repeat Simple_repeat 2 60 0 270 307 60 37 chr17 35320714 35320907 -54183646 - MIR3 SINE MIR -58 150 7 2154 142 0 0 chr17 35322311 35322620 -54181933 - AluSq SINE Alu -4 309 1 677 280 31 59 chr17 35322651 35322937 -54181616 + Charlie8 DNA MER1_type 2 253 -2164 193 259 19 19 chr17 35323063 35323117 -54181436 + L2 LINE L2 2267 2320 -994 184 265 0 0 chr17 35324311 35324360 -54180193 - L2 LINE L2 0 3313 3265 237 289 0 79 chr17 35324777 35324891 -54179662 - MIR SINE MIR -92 116 13 355 254 27 18 chr17 35325572 35325682 -54178871 - MIR SINE MIR -62 146 36 270 0 0 0 chr17 35326755 35326785 -54177768 + (TAA)n Simple_repeat Simple_repeat 1 30 0 217 295 50 50 chr17 35326846 35326985 -54177568 - L2 LINE L2 0 3313 3175 236 329 86 7 chr17 35327077 35327217 -54177336 + L2 LINE L2 2606 2756 -558 2880 191 6 32 chr17 35327489 35327944 -54176609 + MLT2B1 LTR ERVL 10 476 -44 207 0 0 0 chr17 35327944 35327967 -54176586 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 2090 128 10 0 chr17 35327968 35328441 -54176112 - AluSx SINE Alu 0 476 1 2880 191 6 32 chr17 35328441 35328507 -54176046 + MLT2B1 LTR ERVL 475 520 0 29 0 0 0 chr17 35329335 35329364 -54175189 + AT_rich Low_complexity Low_complexity 1 29 0 2182 96 20 3 chr17 35329370 35329662 -54174891 + AluSq SINE Alu 1 297 -16 374 278 65 29 chr17 35329734 35329903 -54174650 - MIR SINE MIR -60 148 19 458 251 42 12 chr17 35330452 35330619 -54173934 + MER113 DNA MER1_type? 24 195 -326 180 97 0 0 chr17 35330709 35330740 -54173813 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 409 198 22 11 chr17 35330755 35330846 -54173707 + MER113 DNA MER1_type? 357 448 -73 260 310 35 0 chr17 35332667 35332780 -54171773 - MIR SINE MIR -12 250 134 688 260 48 26 chr17 35333177 35333404 -54171149 + MIR SINE MIR 31 262 0 303 93 0 0 chr17 35333794 35333837 -54170716 + (TG)n Simple_repeat Simple_repeat 1 43 0 3233 145 116 64 chr17 35334249 35334432 -54170121 - LTR8A LTR ERV1 -2 725 553 1198 84 6 6 chr17 35334432 35334610 -54169943 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1720 180 10 3 chr17 35334614 35334903 -54169650 - AluJb SINE Alu -20 292 2 3233 145 116 64 chr17 35334903 35335403 -54169150 - LTR8A LTR ERV1 -176 551 1 5543 101 19 23 chr17 35335540 35335757 -54168796 - L1PA15 LINE L1 -2 6163 5947 1830 155 3 56 chr17 35335757 35336079 -54168474 - AluJo SINE Alu -2 310 6 5543 101 19 23 chr17 35336079 35337424 -54167129 - L1PA15 LINE L1 -218 5947 4664 1928 146 42 0 chr17 35337424 35337711 -54166842 - AluSx SINE Alu -13 299 1 5543 101 19 23 chr17 35337711 35338119 -54166434 - L1PA15 LINE L1 -1501 4664 4256 950 112 13 26 chr17 35338153 35338305 -54166248 - LTR8A LTR ERV1 -577 150 1 5073 106 6 1 chr17 35338614 35339302 -54165251 - LTR8 LTR ERV1 0 691 1 3380 117 15 52 chr17 35339411 35340007 -54164546 - MER4B LTR ERV1 -36 574 1 1801 164 3 14 chr17 35340171 35340552 -54164001 + AluSx SINE Alu 2 379 0 471 303 66 20 chr17 35340917 35341154 -54163399 - MIR SINE MIR -6 256 6 279 133 0 0 chr17 35342554 35342599 -54161954 + (TG)n Simple_repeat Simple_repeat 2 46 0 221 222 32 16 chr17 35343214 35343277 -54161276 - MER5A DNA MER1_type -11 178 115 830 306 92 22 chr17 35343298 35343710 -54160843 - MLT1J2 LTR MaLR 0 450 10 249 184 61 0 chr17 35344105 35344154 -54160399 + MIR SINE MIR 101 152 -56 240 261 120 22 chr17 35344317 35344409 -54160144 + MER5A DNA MER1_type 9 109 -80 422 295 33 0 chr17 35345165 35345287 -54159266 - L2 LINE L2 0 3313 3188 325 247 82 88 chr17 35345306 35345476 -54159077 - MIR SINE MIR -5 257 89 423 299 162 0 chr17 35346092 35346246 -54158307 - MER5A DNA MER1_type 0 189 11 472 320 34 11 chr17 35346263 35346441 -54158112 - MIR SINE MIR 0 262 81 433 277 113 6 chr17 35347183 35347342 -54157211 + MER5A DNA MER1_type 13 188 -1 402 335 132 19 chr17 35347386 35347598 -54156955 + MIR SINE MIR 20 255 -7 315 335 125 27 chr17 35347779 35348308 -54156245 + L3 LINE CR1 738 1390 -187 293 348 81 0 chr17 35348365 35348526 -54156027 - MIR SINE MIR -81 181 8 276 302 198 0 chr17 35348533 35348639 -54155914 + L3 LINE CR1 1379 1505 -72 2198 178 35 113 chr17 35349271 35349420 -54155133 + L1MB7 LINE L1 614 773 -5769 2063 118 3 33 chr17 35349420 35349724 -54154829 - AluSx SINE Alu -17 295 1 2198 178 35 113 chr17 35349724 35350036 -54154517 + L1MB7 LINE L1 773 1020 -5522 7320 66 6 0 chr17 35350036 35351001 -54153552 + L1PA7 LINE L1 5183 6152 -2 2198 178 35 113 chr17 35351001 35351138 -54153415 + L1MB7 LINE L1 1020 1166 -5376 957 246 9 23 chr17 35351136 35351478 -54153075 + L1MB7 LINE L1 3538 3874 -2770 * 1177 174 17 131 chr17 35351472 35351731 -54152822 + L1MB7 LINE L1 4519 4729 -1915 884 140 7 37 chr17 35351731 35351867 -54152686 + AluJo SINE Alu 2 133 -169 1177 174 17 131 chr17 35351867 35351957 -54152596 + L1MB7 LINE L1 4729 4828 -1816 41781 70 7 2 chr17 35351969 35358082 -54146471 + L1PA5 LINE L1 11 6152 -2 982 192 68 4 chr17 35358103 35358337 -54146216 + L1MB7 LINE L1 4814 5062 -1582 2625 183 48 26 chr17 35358338 35358842 -54145711 + MLT2B3 LTR ERVL 1 515 -39 316 215 0 0 chr17 35358851 35358916 -54145637 + Ricksha DNA DNA 836 900 -2346 4200 190 38 16 chr17 35358917 35359065 -54145488 + L1MB7 LINE L1 5056 5199 -1483 2284 108 0 10 chr17 35359065 35359379 -54145174 + AluY SINE Alu 1 311 0 4200 190 38 16 chr17 35359379 35360801 -54143752 + L1MB7 LINE L1 5199 6663 -19 2198 118 3 3 chr17 35361669 35361973 -54142580 + AluSq SINE Alu 1 304 -9 308 284 135 7 chr17 35363556 35363697 -54140856 - MIR3 SINE MIR -30 178 20 319 326 11 0 chr17 35363738 35363827 -54140726 + MIR SINE MIR 61 150 -112 564 296 190 0 chr17 35364360 35364644 -54139909 + MLT1I LTR MaLR 72 409 0 586 345 34 8 chr17 35365766 35366001 -54138552 + MIR SINE MIR 2 242 -20 240 312 176 54 chr17 35366325 35366604 -54137949 + L2 LINE L2 2957 3269 -3 472 254 60 90 chr17 35366854 35366986 -54137567 + MIR SINE MIR 30 164 -98 894 201 13 0 chr17 35366986 35367135 -54137418 + AluJo SINE Alu 137 287 -15 284 0 0 27 chr17 35367138 35367175 -54137378 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 472 254 60 90 chr17 35367175 35367271 -54137282 + MIR SINE MIR 166 249 -13 2877 227 67 46 chr17 35367992 35369029 -54135524 - L1ME2 LINE L1 0 6164 5106 263 274 0 16 chr17 35369029 35369091 -54135462 + polypyrimidine Low_complexity Low_complexity 3 63 0 766 130 11 33 chr17 35369092 35369276 -54135277 + CT-rich Low_complexity Low_complexity 1 180 0 204 97 0 0 chr17 35369290 35369321 -54135232 + (TCTCC)n Simple_repeat Simple_repeat 4 34 0 246 229 0 0 chr17 35369362 35369410 -54135143 - L1ME2 LINE L1 -1071 5075 5028 1743 158 63 0 chr17 35369412 35369696 -54134857 - MER7A DNA MER2_type -2 344 45 3728 250 70 15 chr17 35369745 35371068 -54133485 - L1ME2 LINE L1 -1167 4979 3585 293 273 124 25 chr17 35371106 35371267 -54133286 + MIR SINE MIR 74 250 -12 233 286 40 53 chr17 35371433 35371565 -54132988 - MIR SINE MIR -57 151 70 230 356 10 29 chr17 35371751 35371855 -54132698 + MIR SINE MIR 77 178 -84 * 491 289 128 20 chr17 35371825 35372029 -54132524 - MIR SINE MIR -1 261 36 422 179 0 0 chr17 35372037 35372115 -54132438 + L1MA10 LINE L1 6250 6327 -7 262 231 0 26 chr17 35372197 35372275 -54132278 + L1ME3 LINE L1 6083 6158 -4 196 197 15 15 chr17 35372519 35372585 -54131968 + (TA)n Simple_repeat Simple_repeat 2 67 0 209 95 0 24 chr17 35372612 35372654 -54131899 + (TAAAAA)n Simple_repeat Simple_repeat 6 46 0 207 297 0 0 chr17 35372735 35372836 -54131717 + (TA)n Simple_repeat Simple_repeat 1 101 0 267 170 149 32 chr17 35373409 35373503 -54131050 - L1ME4a LINE L1 -209 5912 5808 609 300 101 22 chr17 35373869 35374315 -54130238 - L1ME4a LINE L1 -348 5773 5293 2127 119 3 0 chr17 35374350 35374652 -54129901 + AluSq SINE Alu 1 303 -10 2176 96 7 10 chr17 35374762 35375064 -54129489 - AluSx SINE Alu -11 301 1 315 259 0 0 chr17 35375224 35375309 -54129244 - L1ME4a LINE L1 -1318 4828 4744 2834 244 57 44 chr17 35375351 35376516 -54128037 - L1ME3A LINE L1 -1 6169 4987 1214 29 0 0 chr17 35376516 35376652 -54127901 - L1PA5 LINE L1 -5 6149 6014 2834 244 57 44 chr17 35376652 35376760 -54127793 - L1ME3A LINE L1 -1183 4987 4882 464 229 71 14 chr17 35376785 35376925 -54127628 + L1ME3A LINE L1 5797 5944 -226 * 740 271 22 22 chr17 35376909 35376956 -54127597 - L1ME3A LINE L1 -1282 4864 4818 1711 154 0 77 chr17 35376956 35377280 -54127273 - AluJo SINE Alu -13 299 1 740 271 22 22 chr17 35377280 35377509 -54127044 - L1ME3A LINE L1 -1327 4819 4588 39 80 0 0 chr17 35377589 35377677 -54126876 + AT_rich Low_complexity Low_complexity 1 88 0 2337 88 7 0 chr17 35378380 35378675 -54125878 - AluSc SINE Alu -12 297 1 636 98 0 0 chr17 35378756 35378838 -54125715 + AluY SINE Alu 2 83 -227 2603 91 91 21 chr17 35378840 35379259 -54125294 - LTR7 LTR ERV1 -2 448 1 2625 69 48 13 chr17 35379259 35379638 -54124915 - HERVH LTR ERV1 0 7713 7322 1325 130 33 9 chr17 35379636 35379851 -54124702 - HERVH LTR ERV1 -1894 5819 5600 * 4083 147 14 18 chr17 35379852 35380517 -54124036 - HERVH LTR ERV1 -2564 5149 4488 3377 118 6 2 chr17 35380519 35381019 -54123534 - HERVH LTR ERV1 -3720 3993 3492 * 20256 101 58 29 chr17 35381009 35384209 -54120344 - HERVH LTR ERV1 -4423 3290 1 2830 91 58 19 chr17 35384211 35384642 -54119911 - LTR7 LTR ERV1 -2 448 1 1910 45 0 0 chr17 35384642 35384862 -54119691 + AluY SINE Alu 79 298 -13 331 297 158 22 chr17 35384862 35385084 -54119469 - L2 LINE L2 -584 2730 2479 306 260 21 52 chr17 35385425 35385521 -54119032 - MIR3 SINE MIR -19 189 97 280 328 141 8 chr17 35385567 35385695 -54118858 + MIR SINE MIR 1 145 -117 337 301 82 36 chr17 35385827 35386046 -54118507 + MIR SINE MIR 20 248 -14 251 172 0 17 chr17 35386072 35386130 -54118423 + CT-rich Low_complexity Low_complexity 2 58 0 6169 164 36 27 chr17 35386141 35387781 -54116772 - L1MC1 LINE L1 0 6333 4684 189 0 0 0 chr17 35388833 35388854 -54115699 + (T)n Simple_repeat Simple_repeat 1 21 0 332 321 82 30 chr17 35389232 35389366 -54115187 + MIR SINE MIR 8 148 -114 203 61 30 0 chr17 35389666 35389699 -54114854 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 313 301 44 35 chr17 35391672 35391785 -54112768 + MIR SINE MIR 120 233 -29 320 271 39 16 chr17 35391801 35391930 -54112623 - MER94 DNA DNA -1 133 2 1159 12 47 0 chr17 35392506 35392675 -54111878 + (TCTA)n Simple_repeat Simple_repeat 2 178 0 727 269 42 14 chr17 35392720 35392936 -54111617 + MIR SINE MIR 39 260 -2 413 282 9 9 chr17 35393198 35393308 -54111245 + MIR SINE MIR 20 129 -133 3516 146 25 31 chr17 35393310 35393914 -54110639 + LTR9 LTR ERV1 1 600 -12 405 223 27 115 chr17 35394033 35394181 -54110372 + L2 LINE L2 3179 3313 0 1960 175 92 157 chr17 35394756 35395529 -54109024 + LTR8A LTR ERV1 1 723 -4 194 292 79 56 chr17 35395709 35395798 -54108755 + L2 LINE L2 3150 3240 -32 216 0 0 0 chr17 35395813 35395837 -54108716 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1150 129 110 10 chr17 35396481 35396690 -54107863 - MER30 DNA MER1_type 0 230 1 27 29 0 0 chr17 35396897 35396931 -54107622 + AT_rich Low_complexity Low_complexity 1 34 0 1784 160 3 3 chr17 35396933 35397221 -54107332 - AluJo SINE Alu -24 288 1 189 94 0 0 chr17 35397827 35397859 -54106694 + (A)n Simple_repeat Simple_repeat 1 32 0 651 301 24 10 chr17 35399455 35399661 -54104892 - MIR SINE MIR -46 216 8 227 304 122 9 chr17 35399734 35399849 -54104704 + MIR SINE MIR 76 203 -59 299 297 55 26 chr17 35400371 35400537 -54104016 + MIR SINE MIR 37 206 -56 466 266 98 81 chr17 35400625 35400805 -54103748 + MIR SINE MIR 4 177 -85 1418 155 5 14 chr17 35400805 35401024 -54103529 + MER20 DNA MER1_type 2 218 -1 466 266 98 81 chr17 35401024 35401108 -54103445 + MIR SINE MIR 177 258 -4 186 379 0 0 chr17 35401782 35401848 -54102705 + L2 LINE L2 3186 3251 -21 542 325 78 5 chr17 35402084 35402290 -54102263 - MIR SINE MIR 0 262 42 316 263 26 4 chr17 35402377 35402470 -54102083 + MIR SINE MIR 64 156 -52 349 265 138 25 chr17 35403119 35403300 -54101253 + MIR3 SINE MIR 8 212 -50 206 211 18 18 chr17 35403567 35403624 -54100929 + T-rich Low_complexity Low_complexity 5 61 0 1593 164 20 16 chr17 35404900 35405204 -54099349 + AluJo SINE Alu 1 305 -7 484 296 193 44 chr17 35405589 35405951 -54098602 - L2 LINE L2 -1 3312 2897 254 267 89 11 chr17 35406020 35406110 -54098443 + MER5A DNA MER1_type 72 168 -21 507 258 81 40 chr17 35407553 35407751 -54096802 + MIR SINE MIR 22 227 -35 482 306 13 13 chr17 35408068 35408225 -54096328 - MIR SINE MIR -26 236 80 263 362 60 47 chr17 35408585 35408734 -54095819 + L2 LINE L2 3122 3272 0 297 0 0 0 chr17 35408873 35408906 -54095647 + (TG)n Simple_repeat Simple_repeat 2 34 0 660 297 43 17 chr17 35408974 35409206 -54095347 + MIR SINE MIR 18 255 -7 324 0 0 0 chr17 35409837 35409873 -54094680 + (CA)n Simple_repeat Simple_repeat 2 37 0 432 0 0 0 chr17 35409914 35409962 -54094591 + (CA)n Simple_repeat Simple_repeat 2 49 0 234 91 0 0 chr17 35412229 35412262 -54092291 + (TG)n Simple_repeat Simple_repeat 2 34 0 222 273 53 53 chr17 35415057 35415189 -54089364 + MIR SINE MIR 51 182 -80 27 0 0 0 chr17 35415795 35415822 -54088731 + AT_rich Low_complexity Low_complexity 1 27 0 511 311 80 28 chr17 35415835 35416047 -54088506 + MIR SINE MIR 16 238 -24 2053 106 34 0 chr17 35416703 35416995 -54087558 - AluSg SINE Alu -3 307 6 212 297 78 0 chr17 35417210 35417274 -54087279 - MIR3 SINE MIR -6 202 134 5305 129 6 20 chr17 35417284 35418153 -54086400 - L1MA8 LINE L1 0 6291 5435 202 269 39 19 chr17 35418207 35418259 -54086294 + L2 LINE L2 3186 3238 -34 349 178 0 14 chr17 35418439 35418512 -54086041 - L1ME4a LINE L1 -5 6116 6045 1396 150 0 0 chr17 35418512 35418738 -54085815 + AluJb SINE Alu 87 312 0 23 0 0 0 chr17 35418783 35418806 -54085747 + AT_rich Low_complexity Low_complexity 1 23 0 408 270 14 0 chr17 35420511 35420631 -54083922 + MIR3 SINE MIR 45 171 -37 189 147 0 0 chr17 35420764 35420798 -54083755 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 1174 219 52 60 chr17 35421089 35421458 -54083095 + LTR16A1 LTR ERVL 86 451 -6 774 301 103 58 chr17 35421987 35422432 -54082121 + L3 LINE CR1 1109 1573 -4 510 275 132 21 chr17 35423077 35423266 -54081287 + MIR SINE MIR 7 216 -46 701 313 23 19 chr17 35423566 35423822 -54080731 - MIR SINE MIR 0 262 6 685 104 16 80 chr17 35423866 35424017 -54080536 - MSTB2 LTR MaLR -1 456 291 1045 218 166 3 chr17 35424233 35424522 -54080031 - MSTB2 LTR MaLR -121 336 1 359 315 0 16 chr17 35424537 35424664 -54079889 - MIR SINE MIR -66 142 18 219 367 18 9 chr17 35426086 35426195 -54078358 + L3 LINE CR1 1341 1450 -127 * 456 356 85 13 chr17 35426189 35426425 -54078128 - L2 LINE L2 -3 3269 3017 3045 256 128 57 chr17 35426433 35428424 -54076129 - L1MC4a LINE L1 0 8035 5678 394 306 6 6 chr17 35428414 35428571 -54075982 - L1MC5 LINE L1 -493 7468 7312 * 248 274 0 16 chr17 35428610 35428672 -54075881 - L1MD3 LINE L1 -509 7486 7426 508 231 82 36 chr17 35428760 35428955 -54075598 - L1MC5 LINE L1 -756 7205 7002 591 278 30 0 chr17 35429510 35429679 -54074874 - MIR SINE MIR -10 252 79 2259 159 8 6 chr17 35429857 35430215 -54074338 + MLT1A1 LTR MaLR 7 365 0 258 347 72 30 chr17 35430726 35430893 -54073660 - L2 LINE L2 -164 3108 2935 5640 123 34 8 chr17 35431010 35431889 -54072664 - MER4D LTR ERV1 0 903 2 26 0 0 0 chr17 35432034 35432060 -54072493 + AT_rich Low_complexity Low_complexity 1 26 0 848 155 93 12 chr17 35432230 35432391 -54072162 - MER5B DNA MER1_type -3 175 2 213 278 106 60 chr17 35433741 35433825 -54070728 + MIR SINE MIR 35 114 -148 646 205 114 71 chr17 35433825 35434035 -54070518 - MER20 DNA MER1_type 0 219 1 213 278 106 60 chr17 35434035 35434099 -54070454 + MIR SINE MIR 114 193 -69 273 211 0 0 chr17 35435107 35435159 -54069394 + LTR30 LTR ERV1 1 52 -670 763 84 64 249 chr17 35435159 35435456 -54069097 + LTR12 LTR ERV1 53 294 -420 231 260 14 0 chr17 35435465 35435538 -54069015 + LTR30 LTR ERV1 570 643 -79 631 140 0 0 chr17 35435542 35435635 -54068918 + LTR12 LTR ERV1 617 709 -5 284 370 9 9 chr17 35435635 35435743 -54068810 - MIR SINE MIR -126 136 29 333 284 64 50 chr17 35437015 35437156 -54067397 - L2 LINE L2 -5 3267 3125 298 253 84 12 chr17 35437282 35437365 -54067188 + L2 LINE L2 3173 3261 -11 304 286 21 50 chr17 35438101 35438241 -54066312 + MER103 DNA DNA 3 138 -28 515 297 28 0 chr17 35438561 35438706 -54065847 + MIR SINE MIR 112 260 -2 448 286 20 20 chr17 35438863 35439010 -54065543 + MER5B DNA MER1_type 24 170 -8 266 273 0 0 chr17 35439255 35439321 -54065232 - MIR SINE MIR -116 146 81 307 176 33 121 chr17 35439835 35439926 -54064627 - MIR SINE MIR -84 124 42 500 232 159 0 chr17 35440934 35441085 -54063468 + MER5A DNA MER1_type 9 183 -6 547 315 96 42 chr17 35441503 35441887 -54062666 - MLT1J2 LTR MaLR -1 449 45 238 354 0 0 chr17 35442083 35442162 -54062391 + MIR SINE MIR 72 150 -112 637 274 23 0 chr17 35442220 35442395 -54062158 + LTR67 LTR ERVL 349 527 -30 1194 222 47 47 chr17 35442897 35443275 -54061278 + MLT1A2 LTR MaLR 3 374 -16 214 122 24 0 chr17 35443587 35443628 -54060925 - MIR SINE MIR -26 236 195 384 266 12 77 chr17 35443634 35443732 -54060821 + MIR SINE MIR 99 183 -79 1805 173 7 7 chr17 35443732 35444033 -54060520 - AluSx SINE Alu -11 301 1 384 266 12 77 chr17 35444033 35444103 -54060450 + MIR SINE MIR 183 256 -6 388 285 159 7 chr17 35444107 35444258 -54060295 - MIR SINE MIR -82 180 7 312 285 35 65 chr17 35445483 35445683 -54058870 + MIR SINE MIR 34 227 -35 184 220 119 0 chr17 35445754 35445813 -54058740 - L2 LINE L2 -12 3260 3195 353 348 11 11 chr17 35446202 35446386 -54058167 - L2 LINE L2 -571 2743 2560 1896 148 79 77 chr17 35446502 35446793 -54057760 - MLT1C LTR MaLR 0 467 173 2402 102 0 3 chr17 35446793 35447106 -54057447 + AluSx SINE Alu 1 312 0 1896 148 79 77 chr17 35447106 35447280 -54057273 - MLT1C LTR MaLR -294 173 1 621 135 36 0 chr17 35447301 35447412 -54057141 - MLT1C-int LTR MaLR -14 1357 1243 511 216 0 0 chr17 35447664 35447752 -54056801 + 5S rRNA rRNA 2 89 -32 357 43 0 0 chr17 35448179 35448226 -54056327 + (TG)n Simple_repeat Simple_repeat 2 48 0 430 310 70 5 chr17 35448459 35448646 -54055907 - MIR SINE MIR -56 206 8 769 308 13 4 chr17 35449521 35449748 -54054805 - MIR SINE MIR -26 236 8 513 321 26 42 chr17 35449965 35450230 -54054323 + L2 LINE L2 2361 2621 -693 223 329 59 26 chr17 35450334 35450486 -54054067 + L2 LINE L2 2897 3053 -219 304 313 125 0 chr17 35451462 35451622 -54052931 - MIR SINE MIR -36 226 47 410 299 133 90 chr17 35452023 35452521 -54052032 + L3 LINE CR1 1047 1565 -12 200 228 35 0 chr17 35453279 35453336 -54051217 - MIR SINE MIR -150 112 54 196 297 54 0 chr17 35453850 35453924 -54050629 + MIR SINE MIR 115 192 -70 1763 177 23 0 chr17 35453932 35454237 -54050316 - AluJo SINE Alu 0 312 1 1646 203 0 3 chr17 35454248 35454538 -54050015 - AluJo SINE Alu -7 305 17 311 311 41 36 chr17 35455534 35455684 -54048869 - MIR SINE MIR -67 141 42 427 308 44 8 chr17 35455847 35456097 -54048456 - L1ME4a LINE L1 -190 5931 5673 220 336 96 0 chr17 35456118 35456222 -54048331 + MIR SINE MIR 20 133 -129 287 348 93 0 chr17 35456324 35456485 -54048068 - L1ME4a LINE L1 -2160 5648 5473 304 133 13 13 chr17 35456495 35456570 -54047983 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 2194 110 0 7 chr17 35456600 35456891 -54047662 - AluSx SINE Alu -23 289 1 225 0 0 0 chr17 35457832 35457857 -54046696 + (CATCT)n Simple_repeat Simple_repeat 2 26 0 219 114 0 0 chr17 35457876 35457911 -54046642 + (CA)n Simple_repeat Simple_repeat 1 35 0 517 294 50 68 chr17 35458225 35458623 -54045930 + L1ME3A LINE L1 5493 5883 -287 289 234 43 21 chr17 35458637 35458731 -54045822 + L1ME2 LINE L1 2290 2385 -4011 307 39 0 39 chr17 35458751 35458802 -54045751 + (TAAAA)n Simple_repeat Simple_repeat 1 49 0 1655 240 76 29 chr17 35458824 35459512 -54045041 + L1ME2 LINE L1 2325 3044 -3171 2853 248 93 93 chr17 35459527 35460301 -54044252 + L1MC4 LINE L1 5658 6431 -1611 1701 179 3 26 chr17 35460301 35460613 -54043940 - AluJb SINE Alu -7 305 1 2853 248 93 93 chr17 35460613 35461262 -54043291 + L1MC4 LINE L1 6431 7079 -963 205 71 0 48 chr17 35461262 35461304 -54043249 + (TAGA)n Simple_repeat Simple_repeat 4 43 0 180 77 0 0 chr17 35461307 35461333 -54043220 + (CATA)n Simple_repeat Simple_repeat 1 26 0 2853 248 93 93 chr17 35461333 35462172 -54042381 + L1MC4 LINE L1 7081 8008 -34 1345 230 57 54 chr17 35462215 35464379 -54040174 + L1ME2 LINE L1 3041 5375 -858 1520 191 10 31 chr17 35464379 35464667 -54039886 + AluJo SINE Alu 1 282 -30 1345 230 57 54 chr17 35464667 35465423 -54039130 + L1ME2 LINE L1 5375 6127 -106 2032 115 3 64 chr17 35465475 35465805 -54038748 - AluSx SINE Alu -2 310 1 342 237 61 30 chr17 35465902 35466033 -54038520 + L1MC5 LINE L1 7783 7917 -44 31 44 0 0 chr17 35466245 35466290 -54038263 + AT_rich Low_complexity Low_complexity 1 45 0 612 202 43 53 chr17 35466749 35466937 -54037616 - MIR SINE MIR -28 234 49 1229 60 0 22 chr17 35468027 35468211 -54036342 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 635 154 18 30 chr17 35468212 35468381 -54036172 + CT-rich Low_complexity Low_complexity 4 170 0 916 117 11 22 chr17 35468525 35468705 -54035848 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 282 325 57 0 chr17 35469104 35469227 -54035326 - L2 LINE L2 0 3313 3184 275 356 42 0 chr17 35469627 35469745 -54034808 + L2 LINE L2 3123 3245 -27 221 256 77 0 chr17 35469937 35470015 -54034538 + MIR SINE MIR 117 200 -62 271 156 13 182 chr17 35470051 35470128 -54034425 - MER2 DNA MER2_type -1 344 281 712 186 186 42 chr17 35470184 35470399 -54034154 - MLT1C LTR MaLR -221 246 1 301 334 122 30 chr17 35470837 35470920 -54033633 + L2 LINE L2 2551 2625 -647 2400 65 23 10 chr17 35470920 35471226 -54033327 - AluY SINE Alu -1 310 1 301 334 122 30 chr17 35471226 35471638 -54032915 + L2 LINE L2 2625 3084 -188 186 313 0 45 chr17 35471662 35471729 -54032824 + L2 LINE L2 3250 3313 0 471 302 88 0 chr17 35471751 35471956 -54032597 + MIR SINE MIR 34 256 -6 525 167 0 0 chr17 35472048 35472198 -54032355 + (TA)n Simple_repeat Simple_repeat 1 150 0 280 301 8 65 chr17 35472660 35472783 -54031770 - MIR3 SINE MIR -8 200 85 241 306 81 9 chr17 35472912 35473023 -54031530 + L2 LINE L2 3191 3309 -4 196 227 155 62 chr17 35473205 35473302 -54031251 + MIR SINE MIR 31 136 -126 264 309 106 24 chr17 35474193 35474316 -54030237 - L2 LINE L2 -2 3270 3138 679 229 51 62 chr17 35474634 35474909 -54029644 + L1ME3A LINE L1 5690 5961 -209 448 274 71 42 chr17 35475853 35476021 -54028532 - MIR SINE MIR -88 174 2 303 254 59 51 chr17 35478498 35478616 -54025937 + L2 LINE L2 3195 3313 0 45135 36 2 4 chr17 35478620 35484784 -54019769 + L1PA3 LINE L1 1 6155 0 490 290 86 41 chr17 35484927 35485148 -54019405 + MIR SINE MIR 20 250 -12 218 315 81 30 chr17 35485592 35485789 -54018764 - L2 LINE L2 -160 3112 2906 334 295 0 0 chr17 35485956 35486051 -54018502 - MIR SINE MIR -109 153 59 375 309 77 6 chr17 35486534 35486702 -54017851 - MER5A DNA MER1_type -3 186 7 223 320 57 41 chr17 35486999 35487121 -54017432 + MIR3 SINE MIR 66 189 -19 238 333 59 0 chr17 35487494 35487596 -54016957 - MER91C DNA MER1_type -32 108 1 352 250 68 0 chr17 35488041 35488129 -54016424 - MER96 DNA MER1_type? -80 95 2 517 342 82 46 chr17 35488132 35488770 -54015783 - L2 LINE L2 -17 3255 2600 282 353 81 41 chr17 35489484 35489804 -54014749 - L2 LINE L2 -21 3251 2919 340 276 29 22 chr17 35490653 35490814 -54013739 + MIR SINE MIR 11 162 -46 2317 91 3 7 chr17 35491501 35491808 -54012745 + AluSq SINE Alu 1 306 -7 1208 131 11 0 chr17 35491811 35491987 -54012566 + AluSg/x SINE Alu 135 312 0 344 263 183 0 chr17 35491994 35492184 -54012369 - L2 LINE L2 -297 3016 2795 265 315 0 11 chr17 35492393 35492485 -54012068 - MIR SINE MIR -70 138 48 2348 107 3 0 chr17 35492721 35493031 -54011522 + AluSx SINE Alu 1 311 -1 182 291 137 8 chr17 35493411 35493528 -54011025 + MIR SINE MIR 96 227 -35 846 197 6 11 chr17 35493569 35493747 -54010806 - MER5A DNA MER1_type 0 189 13 664 197 0 33 chr17 35494424 35494546 -54010007 + MER58A DNA MER1_type 1 118 0 481 253 0 0 chr17 35494588 35494687 -54009866 + MER58A DNA MER1_type 125 223 -1 435 299 111 11 chr17 35494936 35495287 -54009266 + L1ME4a LINE L1 5726 6111 -10 302 217 142 19 chr17 35495330 35495436 -54009117 + MIR SINE MIR 58 176 -86 2252 106 7 0 chr17 35495965 35496258 -54008295 - AluSx SINE Alu -17 295 1 274 362 26 13 chr17 35497816 35497968 -54006585 - MIR SINE MIR -89 173 20 824 176 25 18 chr17 35498364 35498622 -54005931 + GA-rich Low_complexity Low_complexity 1 259 0 648 279 18 0 chr17 35498623 35498788 -54005765 + MER63A DNA MER1_type 39 206 -4 560 287 19 0 chr17 35499171 35499328 -54005225 - MIR3 SINE MIR -16 192 33 280 240 42 52 chr17 35499416 35499512 -54005041 - MER81 DNA DNA 0 114 20 375 268 45 36 chr17 35500004 35500186 -54004367 - L1ME4a LINE L1 -225 5896 5710 351 311 106 61 chr17 35500189 35500501 -54004052 - L1ME4a LINE L1 -442 5679 5354 767 238 0 17 chr17 35501314 35501495 -54003058 - MER5B DNA MER1_type 0 178 1 453 296 33 21 chr17 35501698 35501938 -54002615 + MIR SINE MIR 14 256 -6 15562 199 32 6 chr17 35502284 35508811 -53995742 - L1PB1 LINE L1 0 6867 6 436 324 84 0 chr17 35508827 35509006 -53995547 + MIR SINE MIR 54 247 -15 228 363 52 36 chr17 35510372 35510565 -53993988 + L2 LINE L2 2861 3056 -216 210 118 0 0 chr17 35510711 35510745 -53993808 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 512 274 61 12 chr17 35511269 35511433 -53993120 - MER117 DNA MER1_type -24 173 2 497 295 98 26 chr17 35511660 35511894 -53992659 + L2 LINE L2 2430 2680 -634 1604 198 149 30 chr17 35511911 35512382 -53992171 + L1ME2 LINE L1 5628 6154 -10 330 217 36 58 chr17 35512423 35512561 -53991992 + L1MC5 LINE L1 7783 7917 -44 294 378 29 18 chr17 35512570 35512882 -53991671 + L2 LINE L2 2698 3015 -257 199 362 29 9 chr17 35512908 35513013 -53991540 + L2 LINE L2 3163 3269 -44 650 273 19 57 chr17 35514027 35514291 -53990262 + MIR SINE MIR 9 262 0 211 322 0 0 chr17 35514829 35514888 -53989665 + GA-rich Low_complexity Low_complexity 3 61 0 2299 103 0 7 chr17 35514892 35515192 -53989361 + AluSq SINE Alu 1 298 -15 299 192 13 0 chr17 35515689 35515767 -53988786 + (TGAA)n Simple_repeat Simple_repeat 1 79 0 234 81 0 0 chr17 35515908 35515945 -53988608 + (TC)n Simple_repeat Simple_repeat 1 37 0 312 27 0 0 chr17 35515945 35515982 -53988571 + (TG)n Simple_repeat Simple_repeat 2 38 0 295 263 38 53 chr17 35516355 35516488 -53988065 - MIR SINE MIR -118 144 14 1569 188 22 7 chr17 35518484 35518783 -53985770 - AluJb SINE Alu 0 305 3 347 276 57 0 chr17 35519130 35519235 -53985318 - MIR SINE MIR -123 139 29 267 366 42 10 chr17 35519469 35519807 -53984746 + L3 LINE CR1 1069 1459 -118 212 362 43 0 chr17 35519901 35519995 -53984558 + L2 LINE L2 3175 3272 -41 1051 220 33 4 chr17 35520012 35520257 -53984296 - MLT1H LTR MaLR -293 256 5 216 0 0 0 chr17 35520264 35520288 -53984265 + (T)n Simple_repeat Simple_repeat 1 24 0 282 286 124 0 chr17 35520459 35520564 -53983989 + L2 LINE L2 3155 3272 0 448 283 94 26 chr17 35520636 35520869 -53983684 + MIR SINE MIR 13 261 -1 896 302 122 21 chr17 35521487 35521961 -53982592 - MLT1H1 LTR MaLR 0 555 34 336 331 23 8 chr17 35522148 35522278 -53982275 - MIR3 SINE MIR -54 154 23 190 289 133 11 chr17 35522804 35522894 -53981659 + L2 LINE L2 3153 3253 -19 348 24 0 0 chr17 35523645 35523686 -53980867 + (TG)n Simple_repeat Simple_repeat 1 41 0 1371 305 21 14 chr17 35524481 35524963 -53979590 - L1ME3A LINE L1 -7 6163 5679 2255 249 57 27 chr17 35525096 35525898 -53978655 - L1ME1 LINE L1 -47 6119 5338 220 276 90 8 chr17 35526141 35526275 -53978278 - MIR SINE MIR -44 218 74 181 259 0 69 chr17 35526640 35526698 -53977855 + L2 LINE L2 3230 3283 -30 380 289 0 0 chr17 35526803 35526917 -53977636 + MIR SINE MIR 78 191 -71 208 336 69 8 chr17 35527166 35527297 -53977256 + MIR SINE MIR 63 201 -61 240 313 0 0 chr17 35527314 35527397 -53977156 + C-rich Low_complexity Low_complexity 1 83 0 39 22 0 0 chr17 35527641 35527687 -53976866 + GC_rich Low_complexity Low_complexity 1 46 0 30 0 0 0 chr17 35531227 35531257 -53973296 + AT_rich Low_complexity Low_complexity 1 30 0 28961 38 4 5 chr17 35531257 35535531 -53969022 - L1PA4 LINE L1 0 6155 1887 944 182 13 0 chr17 35736849 35737008 -53767545 + AluJo/FRAM SINE Alu 139 299 -13 209 226 43 11 chr17 35737072 35737165 -53767388 + (TA)n Simple_repeat Simple_repeat 2 97 0 269 221 192 17 chr17 35737178 35737350 -53767203 - L1M4 LINE L1 -3477 2669 2468 2404 71 0 19 chr17 35737350 35737661 -53766892 - AluY SINE Alu -6 305 1 2085 84 4 0 chr17 35737780 35738041 -53766512 - AluSc SINE Alu -9 300 39 573 101 0 0 chr17 35738153 35738232 -53766321 - AluSg/x SINE Alu -15 294 216 234 0 0 0 chr17 35738661 35738687 -53765866 + (CA)n Simple_repeat Simple_repeat 2 27 0 182 154 0 77 chr17 35738687 35738778 -53765775 + (TA)n Simple_repeat Simple_repeat 1 84 0 237 154 15 31 chr17 35738841 35738906 -53765647 + (TA)n Simple_repeat Simple_repeat 1 64 0 2242 101 7 0 chr17 35739377 35739675 -53764878 - AluSp SINE Alu -13 300 1 1893 132 15 0 chr17 35739686 35739959 -53764594 - AluSc SINE Alu -14 295 19 2160 135 0 0 chr17 35740115 35740411 -53764142 - AluSx SINE Alu -14 298 3 1808 168 25 0 chr17 35741098 35741383 -53763170 + AluJb SINE Alu 1 292 -20 509 271 163 35 chr17 35742021 35742224 -53762329 + MIR SINE MIR 15 243 -19 2396 97 3 0 chr17 35743122 35743431 -53761122 + AluSg SINE Alu 1 310 0 696 216 25 10 chr17 35743433 35743632 -53760921 + LOR1-int LTR ERV1 1839 2040 -6080 944 189 39 43 chr17 35743641 35743874 -53760679 - MER50 LTR ERV1 -1 733 502 2247 112 6 6 chr17 35743907 35744220 -53760333 + AluSq SINE Alu 1 313 0 435 188 58 70 chr17 35744233 35744355 -53760198 + L1ME LINE L1 5315 5437 -725 1728 96 112 0 chr17 35744355 35744660 -53759893 + AluSg SINE Alu 1 333 0 435 188 58 70 chr17 35744660 35744721 -53759832 + L1ME LINE L1 5437 5497 -665 1928 91 12 0 chr17 35745102 35745354 -53759199 + AluSx SINE Alu 1 255 -57 1265 273 75 0 chr17 35745395 35745850 -53758703 - L1ME LINE L1 -348 5816 5328 5320 168 27 8 chr17 35745861 35747843 -53756710 - L1PB3 LINE L1 -10 6144 4122 897 267 50 28 chr17 35747839 35748341 -53756212 - L1ME LINE L1 -804 5342 4830 * 1357 231 12 80 chr17 35748356 35748845 -53755708 + MLT2B1 LTR ERVL 2 457 -63 198 0 0 0 chr17 35748852 35748874 -53755679 + (TC)n Simple_repeat Simple_repeat 2 23 0 195 114 0 0 chr17 35748874 35748909 -53755644 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 649 268 20 0 chr17 35749018 35749216 -53755337 - L1ME LINE L1 -1300 4846 4645 12057 211 25 15 chr17 35749238 35751885 -53752668 + L1PA15 LINE L1 2027 4709 -1456 232 27 54 0 chr17 35751885 35751922 -53752631 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 12057 211 25 15 chr17 35751922 35753007 -53751546 + L1PA15 LINE L1 4709 5783 -382 420 111 0 0 chr17 35753010 35753082 -53751471 + L1PA8 LINE L1 3288 3359 -2787 13228 110 11 7 chr17 35753183 35753240 -53751313 + L1PA8 LINE L1 3341 3396 -2776 2084 129 3 10 chr17 35753240 35753542 -53751011 + AluSq SINE Alu 6 305 -8 13228 110 11 7 chr17 35753542 35756344 -53748209 + L1PA8 LINE L1 3396 6163 -9 2142 193 0 2 chr17 35756353 35756746 -53747807 + L1PA15 LINE L1 5769 6160 -5 1387 210 93 21 chr17 35756753 35756791 -53747762 - L1ME LINE L1 -1526 4620 4586 2051 86 15 55 chr17 35756791 35757116 -53747437 - L1PA13 LINE L1 -3 6160 5849 1387 210 93 21 chr17 35757116 35757591 -53746962 - L1ME LINE L1 -1560 4586 4070 810 273 54 13 chr17 35757730 35758118 -53746435 + L1ME LINE L1 2607 3010 -3136 2319 82 7 0 chr17 35758122 35758415 -53746138 + AluSq SINE Alu 1 295 -18 819 40 0 0 chr17 35759183 35759282 -53745271 + SVA Other Other 1286 1384 -2 222 62 0 0 chr17 35759521 35759553 -53745000 + (CA)n Simple_repeat Simple_repeat 2 33 0 3083 277 70 43 chr17 35760179 35762581 -53741972 + L1ME LINE L1 2995 5462 -702 2827 52 0 0 chr17 35762581 35762927 -53741626 - L1PA7 LINE L1 -4 6150 5805 3083 277 70 43 chr17 35762927 35762990 -53741563 + L1ME LINE L1 5462 5522 -642 213 132 0 0 chr17 35763007 35763045 -53741508 + (CA)n Simple_repeat Simple_repeat 1 38 0 3105 211 94 90 chr17 35763093 35763990 -53740563 - L1MC4 LINE L1 -140 7902 6995 2049 139 0 7 chr17 35763990 35764292 -53740261 - AluSx SINE Alu -12 300 1 3105 211 94 90 chr17 35764292 35764832 -53739721 - L1MC4 LINE L1 -1047 6995 6459 9970 121 41 19 chr17 35765148 35767639 -53736914 + L1PBa LINE L1 1321 3863 -2999 358 167 0 0 chr17 35769071 35769137 -53735416 - MLT1A1 LTR MaLR 0 365 300 27 49 0 0 chr17 35769359 35769400 -53735153 + AT_rich Low_complexity Low_complexity 1 41 0 30 69 0 0 chr17 35769685 35769743 -53734810 + AT_rich Low_complexity Low_complexity 1 58 0 1205 192 19 15 chr17 35772089 35772350 -53732203 - L1MC2 LINE L1 -266 6078 5817 1777 162 74 8 chr17 35772374 35772768 -53731785 - L1MB2 LINE L1 -3 6168 5749 * 4049 226 28 19 chr17 35772765 35773954 -53730599 - L1MB2 LINE L1 -1323 4823 3624 466 168 47 9 chr17 35773954 35774061 -53730492 - LTR56 LTR ERV1 -138 307 197 346 341 78 26 chr17 35774125 35774395 -53730158 - L1ME4a LINE L1 -266 5855 5572 400 222 104 52 chr17 35774481 35774693 -53729860 + L1ME3 LINE L1 5937 6159 -3 353 336 32 24 chr17 35775264 35775389 -53729164 + MIR3 SINE MIR 30 155 -53 361 298 54 12 chr17 35775396 35775564 -53728989 + MER117 DNA MER1_type 3 177 -20 258 360 93 7 chr17 35776684 35776823 -53727730 - MIR3 SINE MIR -2 206 56 208 283 40 105 chr17 35776971 35777123 -53727430 + MER5A DNA MER1_type 36 177 -1 407 279 18 9 chr17 35777124 35777235 -53727318 - MIR3 SINE MIR -48 160 49 728 277 45 4 chr17 35778219 35778461 -53726092 - MLT1I LTR MaLR -155 254 3 848 133 0 0 chr17 35779421 35779541 -53725012 - FLAM_C SINE Alu -12 121 2 584 225 27 0 chr17 35779932 35780043 -53724510 - MER81 DNA DNA 0 114 1 204 241 0 0 chr17 35780128 35780186 -53724367 + (TA)n Simple_repeat Simple_repeat 1 58 0 261 297 52 19 chr17 35780187 35780399 -53724154 - L1ME4a LINE L1 -158 5963 5745 34 42 0 0 chr17 35780399 35780447 -53724106 + AT_rich Low_complexity Low_complexity 1 48 0 2000 114 29 4 chr17 35780592 35780873 -53723680 + AluSx SINE Alu 1 288 -24 776 279 54 41 chr17 35781111 35781427 -53723126 + MLT1E2 LTR MaLR 81 400 -226 31 0 0 0 chr17 35781647 35781678 -53722875 + AT_rich Low_complexity Low_complexity 1 31 0 184 0 30 61 chr17 35782397 35782430 -53722123 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 471 96 14 0 chr17 35782914 35782987 -53721566 + MER66B LTR ERV1 413 486 0 614 223 40 0 chr17 35783993 35784141 -53720412 - MIR SINE MIR 0 262 109 186 280 238 21 chr17 35785871 35786014 -53718539 - MIR3 SINE MIR -2 206 33 207 202 75 106 chr17 35786179 35786273 -53718280 - MIR3 SINE MIR -28 180 90 728 305 51 27 chr17 35787302 35787558 -53716995 + MIR SINE MIR 1 262 0 249 333 111 16 chr17 35788154 35788280 -53716273 + MIR SINE MIR 49 186 -76 1821 160 0 19 chr17 35788293 35788600 -53715953 + AluJb SINE Alu 11 311 -1 208 289 10 62 chr17 35788684 35788781 -53715772 - MIR SINE MIR -67 141 56 195 375 0 0 chr17 35789423 35789503 -53715050 + MIR SINE MIR 61 140 -122 190 53 132 0 chr17 35789887 35789925 -53714628 - L2 LINE L2 -348 2966 2924 180 414 145 0 chr17 35790063 35790208 -53714345 + L2 LINE L2 3107 3272 0 21 0 0 0 chr17 35790586 35790607 -53713946 + GC_rich Low_complexity Low_complexity 1 21 0 278 268 14 0 chr17 35790818 35790889 -53713664 - MIR SINE MIR -24 238 167 219 204 0 0 chr17 35791712 35791766 -53712787 + (TG)n Simple_repeat Simple_repeat 2 55 0 318 364 16 16 chr17 35793997 35794126 -53710427 + L2 LINE L2 3138 3266 -6 258 303 151 3 chr17 35794383 35794521 -53710032 - MIR3 SINE MIR -72 136 7 1397 184 14 14 chr17 35796661 35796944 -53707609 + MLT1-int LTR MaLR 329 611 -760 908 195 21 3 chr17 35797071 35797265 -53707288 - MIR SINE MIR -56 206 14 516 265 169 0 chr17 35797266 35797402 -53707151 + MER5A DNA MER1_type 31 189 0 633 301 45 81 chr17 35797764 35798099 -53706454 + L2 LINE L2 2948 3270 -2 195 396 40 7 chr17 35801524 35801673 -53702880 + L2 LINE L2 2896 3049 -223 899 320 153 9 chr17 35802764 35803229 -53701324 - L3 LINE CR1 -65 1512 981 342 0 0 0 chr17 35803620 35803658 -53700895 + (CA)n Simple_repeat Simple_repeat 2 39 0 200 220 231 66 chr17 35803698 35803789 -53700764 + MIR3 SINE MIR 102 207 -1 284 349 9 9 chr17 35803857 35803963 -53700590 - MIR SINE MIR -113 149 44 31 58 0 0 chr17 35804290 35804342 -53700211 + GC_rich Low_complexity Low_complexity 1 52 0 277 307 40 20 chr17 35805307 35805408 -53699145 + MIR SINE MIR 112 214 -48 269 340 0 0 chr17 35805442 35805536 -53699017 - MIR SINE MIR -29 233 140 313 338 23 23 chr17 35805577 35805710 -53698843 - MIR SINE MIR -55 153 21 284 336 38 24 chr17 35806420 35806631 -53697922 + L2 LINE L2 2836 3049 -223 245 279 107 41 chr17 35807387 35807509 -53697044 + MIR SINE MIR 52 181 -81 855 273 53 43 chr17 35808009 35808426 -53696127 + L2 LINE L2 2892 3312 -1 291 278 87 0 chr17 35808406 35808521 -53696032 + L3 LINE CR1 1355 1479 -98 * 181 328 31 16 chr17 35808571 35808635 -53695918 - MIR SINE MIR -66 142 78 276 313 32 0 chr17 35808791 35808891 -53695662 + MIR SINE MIR 44 146 -77 207 0 0 0 chr17 35809286 35809309 -53695244 + (CA)n Simple_repeat Simple_repeat 2 24 0 2344 148 51 5 chr17 35809582 35809955 -53694598 + MLT1B LTR MaLR 1 390 0 182 204 68 23 chr17 35809967 35810011 -53694542 + MIR SINE MIR 103 148 -60 195 328 30 0 chr17 35811368 35811435 -53693118 + MER5B DNA MER1_type 75 143 -35 202 259 17 17 chr17 35811558 35811616 -53692937 + L2 LINE L2 3248 3305 -8 234 0 0 0 chr17 35811620 35811646 -53692907 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 212 210 48 32 chr17 35811854 35811916 -53692637 + L2 LINE L2 3243 3305 -8 216 0 0 0 chr17 35811918 35811942 -53692611 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 287 250 56 62 chr17 35812168 35812312 -53692241 + MIR3 SINE MIR 21 163 -45 1482 234 99 34 chr17 35812397 35812594 -53691959 + L1ME4a LINE L1 5486 5669 -452 1879 141 26 7 chr17 35812594 35812898 -53691655 + AluJo SINE Alu 1 310 -2 1482 234 99 34 chr17 35812898 35813297 -53691256 + L1ME4a LINE L1 5669 6121 0 680 219 101 48 chr17 35813379 35813590 -53690963 + MIR SINE MIR 20 245 -17 303 28 0 0 chr17 35813590 35813626 -53690927 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 680 219 101 48 chr17 35813626 35813642 -53690911 + MIR SINE MIR 245 259 -3 373 306 0 28 chr17 35813828 35813936 -53690617 + MIR SINE MIR 42 146 -62 495 312 98 29 chr17 35814091 35814264 -53690289 + MER91A DNA MER1_type 1 185 -11 619 275 14 55 chr17 35815049 35815267 -53689286 + MIR SINE MIR 51 259 -3 289 323 71 0 chr17 35815430 35815529 -53689024 + L2 LINE L2 3208 3313 0 315 0 0 0 chr17 35815573 35815608 -53688945 + (CA)n Simple_repeat Simple_repeat 2 36 0 272 234 64 21 chr17 35815979 35816073 -53688480 - MIR SINE MIR -86 122 25 206 376 8 8 chr17 35817442 35817575 -53686978 + GA-rich Low_complexity Low_complexity 2 134 0 309 26 0 0 chr17 35817913 35817951 -53686602 + (TG)n Simple_repeat Simple_repeat 2 39 0 198 0 0 0 chr17 35817951 35817973 -53686580 + (GA)n Simple_repeat Simple_repeat 2 23 0 205 379 118 25 chr17 35818154 35818315 -53686238 - MIR SINE MIR -8 254 79 309 301 54 25 chr17 35818472 35818663 -53685890 - MIR SINE MIR -41 221 21 373 247 215 0 chr17 35819094 35819187 -53685366 - MER81 DNA DNA 0 114 2 339 288 63 9 chr17 35819339 35819450 -53685103 + MIR SINE MIR 96 212 -50 403 223 48 10 chr17 35819642 35819745 -53684808 - MIR3 SINE MIR -21 187 81 287 238 12 0 chr17 35819926 35820006 -53684547 + L2 LINE L2 2909 2989 -283 2759 147 33 0 chr17 35820058 35820540 -53684013 + MER41E LTR ERV1 15 512 0 386 367 45 41 chr17 35820567 35820812 -53683741 + L2 LINE L2 3027 3272 0 383 307 114 18 chr17 35820797 35820963 -53683590 - L2 LINE L2 -4 3309 3128 * 2213 252 37 74 chr17 35822841 35823681 -53680872 + MER21B LTR ERV1 1 809 -54 223 311 95 74 chr17 35823737 35823927 -53680626 + L2 LINE L2 3069 3262 -10 * 593 313 78 21 chr17 35823921 35824164 -53680389 + L3 LINE CR1 1314 1570 -7 208 319 0 14 chr17 35824198 35824270 -53680283 + GA-rich Low_complexity Low_complexity 1 71 0 302 283 214 13 chr17 35824548 35824707 -53679846 + MIR3 SINE MIR 3 193 -15 2328 93 0 6 chr17 35824751 35825063 -53679490 - AluSq SINE Alu -3 310 1 303 207 54 34 chr17 35825347 35825476 -53679077 + MLT1H LTR MaLR 369 448 -2 637 300 123 18 chr17 35826107 35826334 -53678219 + MIR SINE MIR 12 262 0 257 327 87 74 chr17 35826565 35826874 -53677679 - L2 LINE L2 -448 2866 2554 443 225 243 40 chr17 35826890 35827063 -53677490 + MIR SINE MIR 30 237 -25 243 239 0 45 chr17 35827736 35827803 -53676750 + MIR3 SINE MIR 118 181 -27 275 337 0 11 chr17 35828670 35828765 -53675788 - MIR3 SINE MIR -17 191 98 192 215 224 47 chr17 35829126 35829233 -53675320 + MIR SINE MIR 20 145 -63 333 0 0 0 chr17 35830662 35830699 -53673854 + (CA)n Simple_repeat Simple_repeat 1 37 0 217 175 0 0 chr17 35830887 35830927 -53673626 - L2 LINE L2 -4 3309 3270 268 288 25 0 chr17 35831196 35831276 -53673277 - MER5A DNA MER1_type -36 153 72 314 269 192 0 chr17 35831337 35831441 -53673112 + MER5B DNA MER1_type 2 125 -53 208 93 0 47 chr17 35831441 35831484 -53673069 + (TAAAAA)n Simple_repeat Simple_repeat 2 42 0 217 97 0 0 chr17 35831488 35831519 -53673034 + MER5B DNA MER1_type 148 178 0 434 272 29 69 chr17 35833099 35833272 -53671281 - MIR3 SINE MIR -13 195 30 260 158 0 88 chr17 35833607 35833664 -53670889 + L2 LINE L2 3262 3313 0 222 118 0 0 chr17 35834238 35834272 -53670281 + (T)n Simple_repeat Simple_repeat 1 34 0 363 292 97 0 chr17 35834713 35834857 -53669696 + MIR SINE MIR 47 204 -58 213 39 0 0 chr17 35835053 35835079 -53669474 + (TG)n Simple_repeat Simple_repeat 1 26 0 308 303 191 25 chr17 35835394 35835556 -53668997 + MIR3 SINE MIR 19 207 -1 367 276 202 20 chr17 35835741 35835944 -53668609 - MIR SINE MIR -14 248 9 214 333 97 0 chr17 35836163 35836235 -53668318 + L2 LINE L2 3173 3251 -21 1377 161 77 42 chr17 35836238 35836524 -53668029 + AluJo SINE Alu 15 310 -2 930 228 5 5 chr17 35836538 35836735 -53667818 - MIR SINE MIR 0 262 66 767 244 196 36 chr17 35836871 35837426 -53667127 - L2 LINE L2 0 3313 2643 729 202 17 34 chr17 35837667 35837845 -53666708 + MER33 DNA MER1_type 1 175 -149 720 165 30 15 chr17 35837867 35838000 -53666553 - AluJb SINE Alu -176 136 2 708 192 32 0 chr17 35838002 35838158 -53666395 + MER33 DNA MER1_type 203 363 0 240 319 133 24 chr17 35838377 35838543 -53666010 - MIR SINE MIR -1 261 78 186 301 27 14 chr17 35839228 35839301 -53665252 - MIR SINE MIR -111 151 78 1554 199 3 30 chr17 35839517 35839818 -53664735 + AluJo SINE Alu 3 295 -17 186 308 192 0 chr17 35840045 35840123 -53664430 - MIR SINE MIR -122 140 48 216 281 0 62 chr17 35840872 35840936 -53663617 + L2 LINE L2 3204 3263 -9 559 218 54 172 chr17 35841802 35842092 -53662461 + L2 LINE L2 2851 3055 -258 2133 103 0 40 chr17 35842092 35842393 -53662160 + AluSx SINE Alu 21 309 -3 559 218 54 172 chr17 35842393 35842620 -53661933 + L2 LINE L2 3055 3307 -6 396 360 82 30 chr17 35842660 35843027 -53661526 - L2 LINE L2 0 3272 2887 242 272 97 9 chr17 35844127 35844241 -53660312 + L3b LINE CR1 1263 1386 -197 189 0 0 0 chr17 35844823 35844844 -53659709 + (CA)n Simple_repeat Simple_repeat 2 22 0 409 329 40 0 chr17 35845053 35845205 -53659348 - MIR3 SINE MIR -10 198 41 191 235 104 52 chr17 35845505 35845620 -53658933 + MIR3 SINE MIR 47 167 -41 193 143 0 0 chr17 35846505 35846533 -53658020 - L2 LINE L2 -24 3248 3221 352 315 100 0 chr17 35846749 35846879 -53657674 - L2 LINE L2 -213 3059 2917 228 265 15 0 chr17 35847382 35847450 -53657103 - MIR SINE MIR -111 97 29 25 31 0 0 chr17 35849346 35849378 -53655175 + GC_rich Low_complexity Low_complexity 1 32 0 26 50 0 0 chr17 35849530 35849570 -53654983 + GC_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr17 35850012 35850033 -53654520 + GC_rich Low_complexity Low_complexity 1 21 0 306 308 0 0 chr17 35853532 35853610 -53650943 - L2 LINE L2 -56 3257 3180 252 315 11 0 chr17 35854619 35854708 -53649845 - MIR3 SINE MIR -2 206 117 804 290 16 16 chr17 35854880 35855125 -53649428 - MIR SINE MIR -2 260 16 1699 211 5 19 chr17 35855641 35856015 -53648538 - MLT1B LTR MaLR 0 390 22 304 257 19 57 chr17 35856020 35856053 -53648500 + MER94 DNA DNA 34 67 -67 953 54 78 0 chr17 35856053 35856182 -53648371 + MER85 DNA T2_type 1 139 0 304 257 19 57 chr17 35856182 35856253 -53648300 + MER94 DNA DNA 67 134 0 318 372 51 20 chr17 35856255 35856451 -53648102 + MIR SINE MIR 58 259 -3 1134 299 71 47 chr17 35856461 35856984 -53647569 + L2 LINE L2 2773 3309 -4 382 248 0 28 chr17 35857723 35857832 -53646721 - MIR3 SINE MIR -52 156 51 205 353 126 0 chr17 35858196 35858315 -53646238 + L2 LINE L2 3180 3313 0 * 386 296 69 113 chr17 35858314 35858766 -53645787 - L2 LINE L2 -21 3251 2820 247 180 22 67 chr17 35859317 35859406 -53645147 + (CAGAGA)n Simple_repeat Simple_repeat 3 87 0 349 301 77 13 chr17 35859749 35859905 -53644648 - MIR3 SINE MIR -10 198 33 210 389 22 54 chr17 35860230 35860310 -53644243 + L2 LINE L2 3135 3216 -97 2261 128 59 20 chr17 35860310 35860718 -53643835 + MSTB LTR MaLR 1 424 -2 210 389 22 54 chr17 35860718 35860822 -53643731 + L2 LINE L2 3216 3313 0 430 291 34 39 chr17 35860889 35861068 -53643485 - MIR SINE MIR -70 192 15 862 242 142 5 chr17 35861361 35861580 -53642973 + MIR SINE MIR 14 262 0 349 280 177 34 chr17 35862305 35862480 -53642073 - MIR SINE MIR -32 230 31 479 244 0 17 chr17 35864425 35864605 -53639948 + (CACCAT)n Simple_repeat Simple_repeat 4 180 0 361 310 9 0 chr17 35864610 35864723 -53639830 + (CAT)n Simple_repeat Simple_repeat 3 116 0 365 276 0 6 chr17 35864739 35864913 -53639640 + (CAT)n Simple_repeat Simple_repeat 1 173 0 372 216 0 62 chr17 35865011 35865108 -53639445 - MIR SINE MIR -92 170 80 338 358 40 0 chr17 35865272 35865423 -53639130 + MIR3 SINE MIR 41 197 -11 251 239 22 56 chr17 35865430 35865610 -53638943 + (CAGAGA)n Simple_repeat Simple_repeat 6 179 0 181 360 79 0 chr17 35866425 35866539 -53638014 + L2 LINE L2 2694 2816 -498 421 344 117 40 chr17 35867005 35867432 -53637121 + L2 LINE L2 2813 3272 0 188 366 40 46 chr17 35867419 35867722 -53636831 - L2 LINE L2 -874 2440 2140 * 443 285 113 14 chr17 35868169 35868390 -53636163 - MIR SINE MIR 0 262 20 603 266 124 35 chr17 35868530 35868902 -53635651 + MLT1I LTR MaLR 1 405 -4 727 279 8 8 chr17 35869237 35869485 -53635068 + MIR SINE MIR 15 261 -1 768 200 0 0 chr17 35869498 35869678 -53634875 + (CAT)n Simple_repeat Simple_repeat 1 180 0 326 264 20 40 chr17 35869703 35869852 -53634701 + MIR SINE MIR 60 203 -59 * 335 261 24 23 chr17 35869816 35869994 -53634559 - MIR SINE MIR -1 261 5 844 103 63 11 chr17 35869997 35870171 -53634382 + Tigger3(Golem) DNA MER2_type 2429 2611 -418 19164 119 18 4 chr17 35870353 35873338 -53631215 - Tigger3(Golem) DNA MER2_type 0 3029 1 492 48 0 0 chr17 35873582 35873645 -53630908 + (TG)n Simple_repeat Simple_repeat 1 63 0 219 36 0 0 chr17 35873644 35873672 -53630881 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 276 281 9 18 chr17 35873706 35873820 -53630733 + (TG)n Simple_repeat Simple_repeat 2 114 0 221 132 0 19 chr17 35874766 35874819 -53629734 + (CAGAGA)n Simple_repeat Simple_repeat 4 55 0 622 217 51 0 chr17 35875452 35875590 -53628963 - MIR SINE MIR -80 182 38 374 308 31 1 chr17 35876285 35876423 -53628130 + MIR SINE MIR 20 159 -51 402 281 65 81 chr17 35876672 35876857 -53627696 + MIR3 SINE MIR 27 208 0 225 94 0 0 chr17 35877563 35877595 -53626958 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 209 302 0 0 chr17 35877597 35877650 -53626903 - L2 LINE L2 -7 3306 3254 330 291 55 24 chr17 35877688 35877853 -53626700 - L2 LINE L2 -166 3106 2937 212 246 35 0 chr17 35877920 35877977 -53626576 - L2 LINE L2 -15 3298 3240 * 418 238 133 0 chr17 35877975 35878080 -53626473 + MIR SINE MIR 117 235 -27 338 332 71 22 chr17 35878440 35878752 -53625801 + L2 LINE L2 2734 3059 -213 251 155 0 20 chr17 35878792 35878842 -53625711 - HsTC2 DNA Tc2 -4 1894 53 243 61 0 0 chr17 35879006 35879039 -53625514 + (CAAT)n Simple_repeat Simple_repeat 1 33 0 976 265 114 26 chr17 35879050 35879548 -53625005 - L2 LINE L2 -49 3264 2713 218 139 481 0 chr17 35879584 35879663 -53624890 + L2 LINE L2 3153 3269 -3 237 280 139 0 chr17 35880026 35880167 -53624386 - MIR SINE MIR -36 172 10 492 154 11 0 chr17 35880367 35880458 -53624095 + MIR SINE MIR 38 129 -79 638 342 25 30 chr17 35880737 35881135 -53623418 + L2 LINE L2 2580 2975 -339 380 222 101 0 chr17 35881466 35881565 -53622988 - L2 LINE L2 -5 3308 3200 209 160 0 20 chr17 35881794 35881844 -53622709 + CT-rich Low_complexity Low_complexity 2 50 0 301 259 56 70 chr17 35882168 35882231 -53622322 + MIR3 SINE MIR 24 86 -122 1563 196 0 31 chr17 35882231 35882517 -53622036 - AluJo SINE Alu -24 288 12 301 259 56 70 chr17 35882517 35882596 -53621957 + MIR3 SINE MIR 86 164 -44 496 239 18 61 chr17 35882842 35883005 -53621548 + MIR3 SINE MIR 2 157 -51 353 314 27 38 chr17 35883837 35884022 -53620531 - MIR3 SINE MIR -1 207 25 357 297 27 0 chr17 35884464 35884575 -53619978 + MIR3 SINE MIR 9 122 -86 255 209 45 60 chr17 35884785 35884852 -53619701 + MER91C DNA MER1_type 34 99 -41 478 291 19 25 chr17 35885401 35885559 -53618994 + MIR SINE MIR 53 209 -53 277 290 137 16 chr17 35885598 35885722 -53618831 - MIR3 SINE MIR -59 149 11 2430 138 7 2 chr17 35885739 35886153 -53618400 - L1MB3 LINE L1 0 6183 5768 201 279 16 16 chr17 35886370 35886431 -53618122 - MER5A DNA MER1_type 0 189 129 382 222 7 82 chr17 35887174 35887309 -53617244 + L2 LINE L2 2943 3067 -205 185 0 0 39 chr17 35887375 35887401 -53617152 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 358 185 67 0 chr17 35888307 35888396 -53616157 - L1MD3 LINE L1 -1 7994 7726 420 250 0 0 chr17 35889468 35889552 -53615001 - MIR SINE MIR -57 151 68 467 171 45 27 chr17 35890037 35890148 -53614405 - Charlie8 DNA MER1_type -2253 164 52 826 213 98 32 chr17 35890150 35890498 -53614055 + L1MC5 LINE L1 7537 7907 -54 2271 82 0 7 chr17 35890651 35890956 -53613597 + AluSc SINE Alu 1 303 0 1268 199 0 5 chr17 35890976 35891197 -53613356 + MER58A DNA MER1_type 2 221 -3 235 175 0 0 chr17 35891506 35891546 -53613007 + MIR SINE MIR 113 152 -110 358 306 58 8 chr17 35892033 35892154 -53612399 + MIR SINE MIR 130 256 -6 2157 120 0 19 chr17 35892303 35892658 -53611895 - AluSx SINE Alu 0 312 1 1570 175 3 58 chr17 35892658 35892967 -53611586 - AluJo SINE Alu -10 302 11 1195 168 53 5 chr17 35893138 35893346 -53611207 - MER20 DNA MER1_type 0 219 2 321 140 0 0 chr17 35893458 35893515 -53611038 + (ATG)n Simple_repeat Simple_repeat 3 59 0 196 373 49 29 chr17 35893702 35893804 -53610749 - MIR SINE MIR -61 147 60 670 201 191 16 chr17 35893956 35894145 -53610408 - MIR SINE MIR -39 223 2 714 244 120 26 chr17 35894590 35894824 -53609729 + MIR SINE MIR 6 258 -4 231 270 162 27 chr17 35895028 35895139 -53609414 + MLT1K LTR MaLR 209 334 -254 282 324 0 0 chr17 35895292 35895397 -53609156 + MLT1K LTR MaLR 484 588 0 3112 178 28 29 chr17 35896172 35896824 -53607729 + L1MB8 LINE L1 5526 6176 -2 227 275 44 0 chr17 35896839 35896930 -53607623 + HAL1 LINE L1 2413 2507 0 180 0 0 0 chr17 35896960 35896980 -53607573 + (A)n Simple_repeat Simple_repeat 1 20 0 435 316 59 15 chr17 35897000 35897136 -53607417 - MIR SINE MIR -108 154 13 307 243 131 19 chr17 35897596 35897703 -53606850 + MIR SINE MIR 93 211 -51 215 347 65 0 chr17 35897983 35898107 -53606446 + L2 LINE L2 3140 3271 -1 246 204 0 0 chr17 35898108 35898152 -53606401 - MIR3 SINE MIR -14 194 151 290 252 35 80 chr17 35898366 35898498 -53606055 - MIR SINE MIR -63 145 14 248 258 32 0 chr17 35898782 35898844 -53605709 + CT-rich Low_complexity Low_complexity 2 65 0 188 226 32 65 chr17 35898953 35899015 -53605538 - L2 LINE L2 -79 3234 3175 282 337 5 76 chr17 35899513 35899697 -53604856 + L2 LINE L2 3098 3268 -4 381 131 0 0 chr17 35900447 35900508 -53604045 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 552 186 10 0 chr17 35900607 35900704 -53603849 + MER5A DNA MER1_type 9 106 -83 630 264 84 0 chr17 35900921 35901088 -53603465 - MIR SINE MIR -1 261 81 303 387 50 0 chr17 35902215 35902396 -53602157 - MIR SINE MIR 0 262 73 359 215 0 0 chr17 35903028 35903093 -53601460 - MER91 DNA MER1_type -1 139 75 215 222 0 0 chr17 35903277 35903313 -53601240 + L2 LINE L2 2987 3022 -250 320 254 76 25 chr17 35903486 35903604 -53600949 + L2 LINE L2 3185 3308 -5 516 257 85 52 chr17 35904310 35904547 -53600006 + MIR SINE MIR 8 261 -1 233 224 0 0 chr17 35904821 35904870 -53599683 + MIR SINE MIR 91 139 -123 196 262 24 0 chr17 35905449 35905500 -53599053 - MIR SINE MIR -98 164 113 194 143 0 0 chr17 35906328 35906356 -53598197 + MER5C DNA MER1_type 1 28 -296 287 326 107 55 chr17 35906670 35906980 -53597573 - L2 LINE L2 0 3272 2947 480 35 0 0 chr17 35907050 35907108 -53597445 + (GGAGA)n Simple_repeat Simple_repeat 4 61 0 670 229 279 38 chr17 35907177 35907417 -53597136 - MLT1G LTR MaLR 0 590 298 305 256 244 27 chr17 35907454 35907712 -53596841 + L2 LINE L2 2951 3264 -8 848 273 108 30 chr17 35907880 35908500 -53596053 + L2 LINE L2 2643 3313 0 267 219 268 0 chr17 35909461 35909543 -53595010 - L2 LINE L2 0 3313 3210 227 354 54 14 chr17 35909572 35909719 -53594834 - MIR SINE MIR -7 255 103 357 288 93 7 chr17 35909878 35910017 -53594536 - MIR SINE MIR -13 249 99 487 345 52 0 chr17 35910717 35910891 -53593662 - MIR3 SINE MIR -6 202 20 285 283 35 44 chr17 35910906 35911019 -53593534 + MIR SINE MIR 3 114 -148 404 280 55 48 chr17 35911305 35911478 -53593075 - MIR SINE MIR -48 160 10 288 243 27 94 chr17 35912034 35912209 -53592344 - MIR3 SINE MIR -16 192 28 469 177 2 3 chr17 35912751 35912837 -53591716 + MER5A DNA MER1_type 29 102 -76 366 311 67 8 chr17 35912899 35913033 -53591520 - MIR SINE MIR -36 172 31 519 339 62 15 chr17 35913476 35913736 -53590817 - L3 LINE CR1 -344 1233 962 335 281 46 48 chr17 35913971 35914139 -53590414 - MIR SINE MIR -62 146 31 817 303 26 4 chr17 35914741 35914975 -53589578 + MIR SINE MIR 9 247 -15 414 221 12 0 chr17 35914975 35915061 -53589492 + MIR3 SINE MIR 113 199 -9 388 243 35 38 chr17 35915197 35915361 -53589192 - MIR SINE MIR -46 216 60 656 284 233 6 chr17 35915606 35915937 -53588616 + L3 LINE CR1 981 1386 -191 746 139 64 35 chr17 35917099 35917272 -53587281 + MER53 DNA DNA 9 186 -3 426 282 16 8 chr17 35917519 35917643 -53586910 - MIR3 SINE MIR -69 139 15 470 274 252 23 chr17 35918018 35918324 -53586229 + L3 LINE CR1 1003 1378 -199 281 222 167 14 chr17 35918320 35918392 -53586161 + MIR SINE MIR 42 124 -84 * 214 293 56 153 chr17 35918821 35919162 -53585391 + L2 LINE L2 2915 3222 -50 579 305 151 4 chr17 35919179 35919458 -53585095 + L2 LINE L2 2994 3313 0 1222 281 181 8 chr17 35919507 35919981 -53584572 + MLT1K LTR MaLR 33 588 0 263 220 68 0 chr17 35920019 35920078 -53584475 + L2 LINE L2 3249 3311 -2 587 228 108 42 chr17 35920669 35920910 -53583643 - L1MC5 LINE L1 -36 7925 7669 360 64 0 0 chr17 35921182 35921229 -53583324 + (GA)n Simple_repeat Simple_repeat 2 48 0 400 253 39 65 chr17 35921260 35921414 -53583139 + MLT1G1 LTR MaLR 441 590 -5 1480 208 150 83 chr17 35921431 35922310 -53582243 - L1MC5 LINE L1 -297 7664 6727 210 267 207 22 chr17 35922786 35922921 -53581632 + MIR SINE MIR 43 202 -60 978 93 0 0 chr17 35922951 35923090 -53581463 + (TTTCC)n Simple_repeat Simple_repeat 4 142 0 783 32 0 0 chr17 35923091 35923185 -53581368 + (TTTC)n Simple_repeat Simple_repeat 3 96 0 1871 119 45 4 chr17 35923185 35923454 -53581099 - AluJo SINE Alu -32 280 1 271 265 0 0 chr17 35923786 35923854 -53580699 - MIR SINE MIR 0 262 195 1406 264 40 18 chr17 35923861 35924357 -53580196 + L2 LINE L2 2583 3102 -211 285 288 0 0 chr17 35924367 35924440 -53580113 + L2 LINE L2 3241 3313 0 256 254 101 72 chr17 35924443 35924581 -53579972 - MIR SINE MIR -64 198 57 2617 194 91 52 chr17 35925145 35925922 -53578631 - L1ME1 LINE L1 -20 6146 5339 401 306 41 53 chr17 35926127 35926297 -53578256 - MIR3 SINE MIR -25 183 16 402 263 153 24 chr17 35927579 35927763 -53576790 + MIR SINE MIR 3 208 -54 281 389 42 6 chr17 35928047 35928214 -53576339 - MIR3 SINE MIR -6 202 30 192 158 0 0 chr17 35928586 35928624 -53575929 + (CAG)n Simple_repeat Simple_repeat 2 39 0 582 63 0 0 chr17 35928806 35928885 -53575668 + (TCCA)n Simple_repeat Simple_repeat 1 79 0 683 237 81 15 chr17 35928985 35929183 -53575370 + LTR33 LTR ERVL 1 211 -310 330 276 41 0 chr17 35929411 35929509 -53575044 + MIR SINE MIR 81 182 -80 207 336 45 18 chr17 35929505 35929615 -53574938 - MIR SINE MIR -141 121 9 * 423 245 50 14 chr17 35929986 35930125 -53574428 - MIR SINE MIR -45 217 74 196 325 218 19 chr17 35930262 35930570 -53573983 + L2 LINE L2 1589 1957 -1357 1363 255 72 14 chr17 35930576 35931210 -53573343 - L2 LINE L2 0 3313 2648 288 327 112 52 chr17 35931248 35932241 -53572312 + L2 LINE L2 2005 3104 -168 575 315 52 14 chr17 35932246 35932459 -53572094 - MIR SINE MIR -13 249 29 316 283 145 22 chr17 35932501 35932639 -53571914 + L2 LINE L2 3115 3269 -3 391 240 68 27 chr17 35933584 35933730 -53570823 - MIR3 SINE MIR -11 197 46 345 47 0 0 chr17 35934212 35934255 -53570298 + (TG)n Simple_repeat Simple_repeat 1 43 0 220 278 56 33 chr17 35935203 35935293 -53569260 - L2 LINE L2 -22 3250 3159 300 335 74 17 chr17 35935381 35935557 -53568996 - MIR3 SINE MIR -3 205 20 192 184 20 20 chr17 35935733 35935782 -53568771 - L2 LINE L2 0 3272 3224 777 241 42 51 chr17 35937141 35937377 -53567176 - MIR SINE MIR -1 261 28 197 195 73 0 chr17 35938020 35938061 -53566492 - L2 LINE L2 -19 3253 3210 422 231 19 81 chr17 35938429 35938589 -53565964 + MIR3 SINE MIR 5 154 -54 546 227 93 47 chr17 35938694 35938866 -53565687 + MIR SINE MIR 63 242 -20 186 103 0 0 chr17 35938899 35938928 -53565625 + (TCC)n Simple_repeat Simple_repeat 2 30 0 200 305 0 17 chr17 35939393 35939452 -53565101 + MIR3 SINE MIR 125 182 -26 486 295 22 0 chr17 35939698 35939837 -53564716 + MIR3 SINE MIR 44 185 -23 195 162 0 0 chr17 35940014 35940051 -53564502 + CT-rich Low_complexity Low_complexity 1 37 0 186 43 0 0 chr17 35940564 35940587 -53563966 + (TAA)n Simple_repeat Simple_repeat 1 23 0 744 245 77 34 chr17 35940588 35940821 -53563732 - MIR SINE MIR -8 254 12 437 326 64 0 chr17 35941739 35941926 -53562627 + MIR SINE MIR 46 244 -18 * 572 274 65 0 chr17 35941923 35942091 -53562462 - MIR SINE MIR -49 213 35 357 282 48 43 chr17 35942296 35942431 -53562122 + MIR SINE MIR 30 161 -60 * 360 241 60 35 chr17 35942428 35942544 -53562009 + MIR SINE MIR 18 136 -126 816 220 129 13 chr17 35942601 35942833 -53561720 + MIR SINE MIR 3 261 -1 541 237 45 56 chr17 35943772 35943970 -53560583 + MIR SINE MIR 47 242 -20 2839 159 30 40 chr17 35944761 35944825 -53559728 - L1MB2 LINE L1 0 6171 6108 2032 152 3 3 chr17 35944825 35945134 -53559419 - AluJb SINE Alu -3 309 1 2839 159 30 40 chr17 35945134 35945674 -53558879 - L1MB2 LINE L1 -63 6108 5573 319 272 19 19 chr17 35946851 35946954 -53557599 - MIR SINE MIR -109 153 51 255 252 35 47 chr17 35947092 35947231 -53557322 + MIR SINE MIR 31 162 -89 207 302 95 0 chr17 35947497 35947613 -53556940 - MIR3 SINE MIR -11 197 71 677 294 0 16 chr17 35948878 35949072 -53555481 + MIR SINE MIR 21 211 -51 252 385 47 7 chr17 35949100 35949248 -53555305 + L2 LINE L2 3106 3259 -13 201 74 0 0 chr17 35949248 35949275 -53555278 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 354 310 94 35 chr17 35949281 35949452 -53555101 + L3 LINE CR1 1395 1575 -2 205 308 187 0 chr17 35949606 35949713 -53554840 + L2 LINE L2 3146 3272 0 1871 169 3 0 chr17 35950449 35950839 -53553714 + AluJb SINE Alu 1 391 0 216 351 54 12 chr17 35950854 35951022 -53553531 - MIR3 SINE MIR -11 197 23 600 298 36 16 chr17 35952324 35952698 -53551855 - HAL1 LINE L1 -36 2471 2069 241 174 0 22 chr17 35952755 35952801 -53551752 + MLT1J1 LTR MaLR 66 110 -336 1437 283 115 27 chr17 35953007 35953745 -53550808 - HAL1 LINE L1 -452 2055 1253 379 293 131 74 chr17 35953798 35954081 -53550472 - MLT1H LTR MaLR -13 536 238 867 147 7 0 chr17 35954087 35954223 -53550330 + MER66B LTR ERV1 350 486 0 530 301 86 5 chr17 35954224 35954410 -53550143 + MIR SINE MIR 32 232 -30 199 233 0 0 chr17 35955029 35955072 -53549481 - MIR SINE MIR -61 147 105 510 247 66 18 chr17 35955586 35955752 -53548801 + MIR SINE MIR 89 262 0 393 250 44 106 chr17 35955824 35956004 -53548549 + MER5B DNA MER1_type 4 172 -6 311 273 59 31 chr17 35956341 35956513 -53548040 - MIR SINE MIR -50 158 5 244 314 29 39 chr17 35957896 35957998 -53546555 + MIR SINE MIR 41 141 -67 255 290 178 0 chr17 35958282 35958389 -53546164 + L2 LINE L2 3147 3272 0 819 280 133 11 chr17 35958511 35958797 -53545756 - MLT1I LTR MaLR -15 394 74 266 236 69 0 chr17 35958783 35958855 -53545698 - MLT1J2 LTR MaLR -276 174 98 * 399 312 21 7 chr17 35958844 35958985 -53545568 - MLT1I LTR MaLR -261 148 6 214 356 115 0 chr17 35959152 35959256 -53545297 - L2 LINE L2 -23 3290 3175 264 233 0 0 chr17 35959685 35959758 -53544795 + GA-rich Low_complexity Low_complexity 4 76 0 2113 116 55 19 chr17 35959826 35960187 -53544366 + THE1C LTR MaLR 1 374 -1 341 344 107 24 chr17 35960370 35960864 -53543689 + L2 LINE L2 2739 3272 0 214 306 48 0 chr17 35960872 35960934 -53543619 - L3 LINE CR1 -20 1557 1493 875 220 86 0 chr17 35960940 35961126 -53543427 + MER58A DNA MER1_type 1 202 -22 27 0 0 0 chr17 35961415 35961442 -53543111 + AT_rich Low_complexity Low_complexity 1 27 0 226 387 36 0 chr17 35961878 35961989 -53542564 + L3 LINE CR1 345 459 -1118 269 296 151 16 chr17 35962110 35962296 -53542257 - MIR SINE MIR -32 230 20 182 320 160 10 chr17 35962485 35962585 -53541968 + L3 LINE CR1 1083 1197 -380 186 306 86 73 chr17 35963464 35963778 -53540775 - L2 LINE L2 -410 2904 2587 988 215 25 5 chr17 35964798 35964998 -53539555 + MER63A DNA MER1_type 7 210 0 313 299 54 54 chr17 35965631 35965798 -53538755 + MIR3 SINE MIR 1 167 -41 546 195 86 23 chr17 35966681 35966855 -53537698 + L3 LINE CR1 1348 1532 -45 263 222 0 0 chr17 35966895 35966949 -53537604 + MIR SINE MIR 191 244 -18 237 329 0 0 chr17 35968814 35968893 -53535660 + MIR3 SINE MIR 81 159 -49 266 288 12 0 chr17 35968986 35969066 -53535487 - MER103 DNA DNA -75 91 11 219 236 73 0 chr17 35969535 35969590 -53534963 + MIR SINE MIR 9 67 -195 292 250 52 10 chr17 35970062 35970158 -53534395 + MIR SINE MIR 84 183 -79 189 364 13 0 chr17 35971392 35971469 -53533084 + MIR SINE MIR 76 153 -109 317 257 48 38 chr17 35972475 35972580 -53531973 - L2 LINE L2 0 3313 3208 259 274 21 21 chr17 35973499 35973594 -53530959 - MIR SINE MIR -77 131 37 391 351 87 11 chr17 35974281 35974466 -53530087 - MIR SINE MIR -44 218 20 429 288 89 16 chr17 35974635 35974826 -53529727 - MIR SINE MIR -47 215 11 347 339 42 5 chr17 35975751 35975940 -53528613 + L2 LINE L2 2671 2866 -448 284 323 51 71 chr17 35975986 35976280 -53528273 + L2 LINE L2 2931 3218 -54 489 208 149 0 chr17 35976285 35976435 -53528118 + MER5A DNA MER1_type 4 178 -11 187 298 183 10 chr17 35976691 35976795 -53527758 - MIR SINE MIR -89 173 52 244 285 76 62 chr17 35977268 35977412 -53527141 - MIR3 SINE MIR -15 193 48 651 272 10 63 chr17 35977491 35977753 -53526800 - MIR SINE MIR -2 260 11 300 274 25 76 chr17 35978357 35978514 -53526039 + MIR SINE MIR 68 216 -46 1911 277 47 46 chr17 35978677 35979529 -53525024 + L1ME LINE L1 6 858 -5212 357 169 124 22 chr17 35979529 35979618 -53524935 + L1ME LINE L1 798 895 -5175 247 320 20 61 chr17 35979619 35979766 -53524787 - MIR SINE MIR -111 151 11 1430 250 84 5 chr17 35980647 35981075 -53523478 + L1ME3A LINE L1 5706 6167 -3 201 299 63 5 chr17 35981235 35981349 -53523204 - MIR SINE MIR -61 147 41 272 289 52 52 chr17 35981524 35981659 -53522894 + MIR3 SINE MIR 60 194 -14 202 294 0 0 chr17 35981806 35981857 -53522696 - L2 LINE L2 0 3272 3222 285 322 21 42 chr17 35981987 35982130 -53522423 - L2 LINE L2 -216 3056 2917 356 267 185 15 chr17 35983009 35983144 -53521409 - MER5B DNA MER1_type -19 159 2 399 293 9 9 chr17 35983146 35983262 -53521291 + L2 LINE L2 3149 3264 -8 235 300 59 41 chr17 35983410 35983580 -53520973 - MIR SINE MIR -72 190 18 201 322 51 17 chr17 35983761 35983879 -53520674 + MIR3 SINE MIR 2 123 -85 26 0 0 0 chr17 35984790 35984816 -53519737 + AT_rich Low_complexity Low_complexity 1 26 0 186 306 0 0 chr17 35986506 35986555 -53517998 - MIR SINE MIR -69 139 91 481 312 44 39 chr17 35986756 35986961 -53517592 + MIR SINE MIR 50 255 -7 299 344 45 82 chr17 35986990 35987234 -53517319 + L2 LINE L2 2994 3228 -44 248 275 14 14 chr17 35988023 35988092 -53516461 + GA-rich Low_complexity Low_complexity 3 71 0 434 287 61 39 chr17 35988144 35988325 -53516228 + MIR SINE MIR 28 212 -50 278 261 23 11 chr17 35988583 35988671 -53515882 - MIR3 SINE MIR -52 156 68 370 317 46 62 chr17 35988805 35989064 -53515489 + MIR SINE MIR 8 262 0 645 101 0 0 chr17 35989646 35989745 -53514808 + (TCCA)n Simple_repeat Simple_repeat 4 102 0 198 339 92 73 chr17 35989776 35989994 -53514559 - L2 LINE L2 -50 3222 3001 264 30 0 0 chr17 35990486 35990519 -53514034 + (TG)n Simple_repeat Simple_repeat 1 33 0 239 0 32 0 chr17 35990518 35990549 -53514004 + (GA)n Simple_repeat Simple_repeat 1 32 0 * 2562 70 0 0 chr17 35991384 35991686 -53512867 + AluY SINE Alu 6 307 -4 260 325 60 20 chr17 35991902 35992053 -53512500 - MIR SINE MIR -22 240 84 286 234 142 2 chr17 35992593 35992715 -53511838 - MIR SINE MIR -65 143 45 381 274 150 16 chr17 35993156 35993396 -53511157 + L2 LINE L2 2747 3018 -254 298 284 34 11 chr17 35993597 35993685 -53510868 + MIR SINE MIR 104 193 -69 198 302 63 40 chr17 35993830 35993956 -53510597 + MIR SINE MIR 46 174 -88 428 264 32 45 chr17 35994560 35994715 -53509838 + MIR SINE MIR 63 215 -47 726 273 16 5 chr17 35994752 35994946 -53509607 + MIR SINE MIR 7 202 -60 250 287 49 25 chr17 35995378 35995500 -53509053 + LTR67 LTR ERVL 428 552 -5 504 333 52 0 chr17 35995568 35995742 -53508811 + MIR SINE MIR 65 247 -15 351 248 17 44 chr17 35995996 35996186 -53508367 + GA-rich Low_complexity Low_complexity 1 184 0 238 316 105 18 chr17 35996471 35996585 -53507968 + MIR SINE MIR 47 170 -92 373 16 95 31 chr17 35998058 35998122 -53506431 + L1PA8 LINE L1 6081 6147 -7 1443 165 34 79 chr17 35998639 35998702 -53505851 - MLT1A1 LTR MaLR 0 365 301 2006 105 3 34 chr17 35998702 35999027 -53505526 + AluSq SINE Alu 1 316 0 1443 165 34 79 chr17 35999027 35999343 -53505210 - MLT1A1 LTR MaLR -64 301 2 2186 73 0 0 chr17 35999775 36000035 -53504518 - AluY SINE Alu -51 260 1 1088 203 58 120 chr17 36000248 36000647 -53503906 - MLT1A2 LTR MaLR 0 374 1 1898 285 92 47 chr17 36000935 36002005 -53502548 + L2 LINE L2 2195 3313 0 3197 197 40 36 chr17 36002005 36002759 -53501794 + L1MB7 LINE L1 5376 6135 -49 2348 94 0 19 chr17 36002759 36003068 -53501485 + AluY SINE Alu 1 303 -8 3197 197 40 36 chr17 36003068 36003116 -53501437 + L1MB7 LINE L1 6135 6181 -3 225 0 0 0 chr17 36003392 36003417 -53501136 + (GGGA)n Simple_repeat Simple_repeat 2 26 0 502 298 42 47 chr17 36003983 36004198 -53500355 - MIR SINE MIR -18 244 31 289 200 0 125 chr17 36004966 36005046 -53499507 + MLT1I LTR MaLR 70 135 -274 244 309 144 39 chr17 36005503 36005684 -53498869 - L2 LINE L2 -177 3095 2896 23 0 0 0 chr17 36005780 36005803 -53498750 + AT_rich Low_complexity Low_complexity 1 23 0 201 260 0 41 chr17 36007305 36007378 -53497175 + CT-rich Low_complexity Low_complexity 4 73 0 1382 48 0 0 chr17 36007618 36007785 -53496768 - L1PA4 LINE L1 -5 6150 5984 2495 14 0 0 chr17 36007785 36008076 -53496477 + L1PA4 LINE L1 5683 5973 -182 886 268 71 4 chr17 36008480 36008717 -53495836 - MIR SINE MIR -1 261 9 223 342 53 18 chr17 36008717 36008831 -53495722 - MER5A DNA MER1_type 0 189 72 517 298 53 27 chr17 36009205 36009393 -53495160 + MIR SINE MIR 70 262 0 * 1012 291 4 0 chr17 36009350 36009591 -53494962 - MIR SINE MIR -5 257 16 471 257 117 40 chr17 36009781 36010003 -53494550 - L2 LINE L2 0 3313 3075 2530 224 86 40 chr17 36010015 36010857 -53493696 - L2 LINE L2 -361 2953 2074 369 277 107 124 chr17 36011044 36011179 -53493374 - L2 LINE L2 0 3272 3136 963 159 87 48 chr17 36011179 36011386 -53493167 + MER20 DNA MER1_type 1 215 -4 369 277 107 124 chr17 36011386 36011662 -53492891 - L2 LINE L2 -136 3136 2868 491 285 38 0 chr17 36012091 36012249 -53492304 + MIR3 SINE MIR 38 201 -7 303 314 29 20 chr17 36012968 36013070 -53491483 - MIR3 SINE MIR -47 161 59 449 281 38 25 chr17 36013200 36013589 -53490964 - L1ME4a LINE L1 -30 6091 5650 612 301 98 59 chr17 36013850 36014409 -53490144 - MLT1K LTR MaLR -3 585 5 723 235 37 123 chr17 36015114 36015502 -53489051 - MLT1J1 LTR MaLR -6 440 99 2315 105 0 0 chr17 36015502 36015797 -53488756 + AluSx SINE Alu 1 295 -17 723 235 37 123 chr17 36015797 36015889 -53488664 - MLT1J1 LTR MaLR -347 99 1 432 67 0 0 chr17 36017694 36017754 -53486799 + (CA)n Simple_repeat Simple_repeat 2 61 0 470 364 85 26 chr17 36018270 36018731 -53485822 - L1ME LINE L1 -355 5807 5320 272 415 0 6 chr17 36019768 36019932 -53484621 + L2 LINE L2 1045 1207 -2107 379 314 109 25 chr17 36020049 36020371 -53484182 + L2 LINE L2 1543 1891 -1423 2972 133 9 11 chr17 36020450 36021689 -53482864 - L1PA13 LINE L1 -11 6152 4842 488 198 30 10 chr17 36021856 36021957 -53482596 + MIR SINE MIR 25 127 -135 235 226 98 43 chr17 36022165 36022329 -53482224 + L2 LINE L2 2447 2619 -695 1933 153 13 7 chr17 36022399 36022700 -53481853 + AluJo SINE Alu 2 304 -8 303 296 187 60 chr17 36022760 36023108 -53481445 + L2 LINE L2 2872 3263 -9 215 312 9 55 chr17 36023352 36023461 -53481092 - L2 LINE L2 -208 3064 2961 201 74 0 0 chr17 36023853 36023880 -53480673 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2752 19 7 3 chr17 36024069 36024379 -53480174 - AluY SINE Alu 0 311 1 245 267 141 46 chr17 36024411 36024737 -53479816 + L1M4 LINE L1 2805 3161 -2985 363 284 14 68 chr17 36024768 36024916 -53479637 - MER5A DNA MER1_type 0 189 50 330 284 0 67 chr17 36024799 36024933 -53479620 + MER5A DNA MER1_type 43 167 -22 * 1948 117 81 0 chr17 36025421 36025694 -53478859 - AluSx SINE Alu -17 295 1 237 246 18 0 chr17 36025746 36025803 -53478750 + MLT1K LTR MaLR 531 588 0 2078 138 10 0 chr17 36026009 36026306 -53478247 - AluSx SINE Alu -12 300 1 301 294 49 42 chr17 36027006 36027149 -53477404 + MLT1J1 LTR MaLR 19 162 -284 372 326 44 30 chr17 36027801 36027936 -53476617 - L2 LINE L2 0 3272 3136 386 217 152 0 chr17 36028608 36028700 -53475853 + MIR SINE MIR 79 184 -78 378 270 0 17 chr17 36028700 36028815 -53475738 + (CATATA)n Simple_repeat Simple_repeat 2 114 0 238 289 67 0 chr17 36028815 36028905 -53475648 - L1MC4 LINE L1 -1333 6709 6614 219 36 0 0 chr17 36028905 36028933 -53475620 + (TA)n Simple_repeat Simple_repeat 2 29 0 274 288 19 88 chr17 36029572 36029732 -53474821 + MER5A DNA MER1_type 21 169 -20 213 318 12 12 chr17 36029918 36030003 -53474550 - MIR SINE MIR 0 262 178 207 301 106 8 chr17 36030137 36030260 -53474293 - L2 LINE L2 -585 2729 2595 436 285 95 25 chr17 36030279 36030437 -53474116 - MIR SINE MIR -81 181 13 191 318 196 6 chr17 36030517 36030690 -53473863 - L2 LINE L2 -799 2515 2310 247 250 31 16 chr17 36030720 36030784 -53473769 - L2 LINE L2 0 3313 3249 428 218 64 18 chr17 36031304 36031414 -53473139 + MIR SINE MIR 71 185 -77 444 347 60 30 chr17 36031789 36032054 -53472499 - L1ME4a LINE L1 -125 5996 5724 770 246 148 5 chr17 36032366 36032569 -53471984 - MIR SINE MIR 0 262 31 305 354 57 19 chr17 36032559 36032717 -53471836 + MIR SINE MIR 29 192 -70 * 290 246 0 0 chr17 36033877 36033938 -53470615 - L2 LINE L2 0 3313 3253 572 304 40 40 chr17 36034291 36034538 -53470015 + MIR SINE MIR 11 257 -5 188 200 17 0 chr17 36034922 36034982 -53469571 + GA-rich Low_complexity Low_complexity 1 61 0 180 323 46 15 chr17 36035475 36035540 -53469013 + MIR SINE MIR 17 83 -125 2997 237 120 46 chr17 36036003 36036413 -53468140 + L2 LINE L2 1783 2161 -1152 382 169 26 0 chr17 36036413 36036490 -53468063 - MER116 DNA Mariner -1 79 1 2997 237 120 46 chr17 36036490 36037235 -53467318 + L2 LINE L2 2161 3024 -289 2190 124 0 10 chr17 36037235 36037534 -53467019 + AluSx SINE Alu 1 296 -16 2997 237 120 46 chr17 36037534 36037602 -53466951 + L2 LINE L2 3024 3086 -227 409 264 143 50 chr17 36037923 36038181 -53466372 - L2 LINE L2 -32 3281 3000 315 295 39 32 chr17 36038215 36038371 -53466182 + MLT1K LTR MaLR 188 344 -244 336 24 0 0 chr17 36039090 36039131 -53465422 + (CA)n Simple_repeat Simple_repeat 2 42 0 363 325 49 20 chr17 36039154 36039357 -53465196 - L1MC4a LINE L1 -1889 5919 5711 1000 231 168 40 chr17 36039814 36040243 -53464310 + MLT1J LTR MaLR 28 511 0 560 285 20 20 chr17 36040365 36040516 -53464037 + MIR3 SINE MIR 37 187 -21 193 323 129 32 chr17 36040635 36040790 -53463763 + L2 LINE L2 3101 3270 -2 219 390 122 5 chr17 36040962 36041167 -53463386 + MIR SINE MIR 20 248 -14 379 319 68 18 chr17 36041741 36041904 -53462649 + MIR SINE MIR 34 204 -58 351 327 55 0 chr17 36041942 36042052 -53462501 - MIR SINE MIR -73 189 74 1776 139 17 0 chr17 36042909 36043203 -53461350 - AluSx SINE Alu 0 312 14 1367 196 8 4 chr17 36043213 36043500 -53461053 - AluJo SINE Alu 0 309 22 392 316 22 7 chr17 36043519 36043655 -53460898 - MIR3 SINE MIR -62 146 9 331 224 113 33 chr17 36043775 36043908 -53460645 - MIR SINE MIR -67 195 47 525 261 149 63 chr17 36044731 36044953 -53459600 - MIR SINE MIR -19 243 3 1308 212 51 0 chr17 36046308 36046600 -53457953 + AluJo SINE Alu 1 307 -5 297 51 0 0 chr17 36046609 36046648 -53457905 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 262 293 35 26 chr17 36047337 36047453 -53457100 + L1MC/D LINE L1 5607 5723 -2085 674 175 140 35 chr17 36048309 36048480 -53456073 - MER5A DNA MER1_type 0 189 1 357 93 0 0 chr17 36048706 36048760 -53455793 + (GA)n Simple_repeat Simple_repeat 1 54 0 444 266 141 21 chr17 36049159 36049351 -53455202 + MIR SINE MIR 14 228 -34 2008 97 38 0 chr17 36049408 36049697 -53454856 + AluSq SINE Alu 1 300 -13 391 239 87 27 chr17 36049896 36050080 -53454473 + L1 LINE L1 4881 5075 -1071 2099 58 38 45 chr17 36050090 36050437 -53454116 - L1PA8 LINE L1 0 6172 5861 198 150 0 0 chr17 36052950 36052990 -53451563 + (T)n Simple_repeat Simple_repeat 1 40 0 534 238 27 131 chr17 36053516 36053595 -53450958 + MLT1I LTR MaLR 62 148 -261 2343 64 7 0 chr17 36053595 36053891 -53450662 + AluY SINE Alu 1 298 -13 534 238 27 131 chr17 36053891 36054185 -53450368 + MLT1I LTR MaLR 148 396 -13 418 238 70 87 chr17 36055135 36055479 -53449074 + L1ME3 LINE L1 5619 5956 -214 472 312 14 14 chr17 36055712 36055850 -53448703 - MIR3 SINE MIR -6 202 65 532 308 106 62 chr17 36055932 36056212 -53448341 + L2 LINE L2 2469 2770 -544 1978 137 3 10 chr17 36056212 36056525 -53448028 - AluSx SINE Alu 0 312 2 532 308 106 62 chr17 36056525 36056601 -53447952 + L2 LINE L2 2770 2841 -473 374 302 47 0 chr17 36056602 36056731 -53447822 + LTR16C LTR ERVL 324 458 -33 369 321 236 20 chr17 36056772 36057077 -53447476 + L2 LINE L2 2943 3313 0 197 293 91 10 chr17 36057831 36057930 -53446623 + MIR SINE MIR 82 188 -74 822 280 73 5 chr17 36058918 36059136 -53445417 + MIR SINE MIR 28 260 -2 521 303 92 3 chr17 36059161 36059465 -53445088 - L2 LINE L2 -1184 2130 1800 384 252 27 27 chr17 36060362 36060473 -53444080 + MER45A DNA AcHobo 68 178 0 373 288 82 22 chr17 36060728 36060912 -53443641 - MIR SINE MIR -29 233 39 311 308 83 26 chr17 36061508 36061664 -53442889 + MIR3 SINE MIR 21 185 -23 405 273 149 0 chr17 36062381 36062502 -53442051 - MIR3 SINE MIR -48 160 22 653 222 155 26 chr17 36062845 36063039 -53441514 - MIR SINE MIR -31 231 13 252 0 0 0 chr17 36063122 36063150 -53441403 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 187 206 0 0 chr17 36063627 36063661 -53440892 - L2 LINE L2 -339 2975 2942 267 210 173 12 chr17 36064408 36064489 -53440064 + L2 LINE L2 3214 3307 -6 832 65 0 9 chr17 36064602 36064734 -53439819 - AluSg/x SINE Alu 0 309 179 228 256 156 22 chr17 36064793 36064883 -53439670 - MIR SINE MIR -69 139 38 1332 77 10 3 chr17 36065882 36066082 -53438471 + L1P3 LINE L1 5605 5799 -355 361 113 0 0 chr17 36066056 36066109 -53438444 + L1PA11 LINE L1 6121 6173 -1 * 290 272 168 24 chr17 36066306 36066431 -53438122 + MIR3 SINE MIR 18 160 -48 192 315 105 49 chr17 36066737 36066899 -53437654 - L2 LINE L2 -229 3043 2873 1645 149 40 20 chr17 36067365 36067667 -53436886 + AluJo SINE Alu 1 308 -4 750 101 84 0 chr17 36067673 36067792 -53436761 + FRAM SINE Alu 44 172 -4 256 333 97 0 chr17 36069065 36069179 -53435374 + MIR SINE MIR 60 184 -78 375 290 65 45 chr17 36069560 36069715 -53434838 - MIR3 SINE MIR -14 194 37 197 245 97 110 chr17 36070313 36070468 -53434085 + MIR SINE MIR 20 172 -90 245 294 182 21 chr17 36070501 36070644 -53433909 - MIR SINE MIR -36 226 61 245 135 19 0 chr17 36070700 36070752 -53433801 + (CA)n Simple_repeat Simple_repeat 2 54 0 326 251 147 80 chr17 36071739 36071902 -53432651 - MIR3 SINE MIR -2 206 33 257 262 83 41 chr17 36074647 36074792 -53429761 + MIR3 SINE MIR 36 186 -22 2043 121 0 0 chr17 36074815 36075105 -53429448 + AluSx SINE Alu 1 290 -22 399 258 20 24 chr17 36075708 36075833 -53428720 - MIR SINE MIR -63 145 42 1737 134 0 11 chr17 36076458 36076726 -53427827 + AluSx SINE Alu 45 309 -3 463 313 49 17 chr17 36076769 36077117 -53427436 + L1M4 LINE L1 3342 3700 -2446 1145 121 50 11 chr17 36077459 36077641 -53426912 - L1PA10 LINE L1 -3 6165 5977 3717 130 0 0 chr17 36077643 36078211 -53426342 + L1P LINE L1 4675 5242 -904 404 281 37 7 chr17 36078219 36078354 -53426199 + LTR33 LTR ERVL 381 519 -2 287 226 0 0 chr17 36078505 36078558 -53425995 + MER5A DNA MER1_type 134 186 -3 293 268 36 45 chr17 36078748 36078860 -53425693 - HERV16 LTR ERVL -3810 1186 1088 779 144 15 0 chr17 36078860 36078992 -53425561 - L1MA3 LINE L1 0 6305 6172 4171 170 15 14 chr17 36078992 36080394 -53424159 - L1 LINE L1 -3087 4478 3073 * 10896 166 41 13 chr17 36080390 36082194 -53422359 - L1 LINE L1 -5699 1866 12 462 305 90 11 chr17 36082485 36082662 -53421891 + MIR SINE MIR 33 223 -39 431 218 0 0 chr17 36082660 36082738 -53421815 - MER5A DNA MER1_type -111 78 1 * 433 273 10 0 chr17 36083009 36083108 -53421445 + HERV16 LTR ERVL 1720 1819 -3177 350 248 0 59 chr17 36083112 36083213 -53421340 - MER53 DNA DNA 0 189 95 559 257 53 39 chr17 36083241 36083447 -53421106 + HERV16 LTR ERVL 1882 2090 -3674 313 300 112 24 chr17 36084872 36085042 -53419511 - L1ME4a LINE L1 -203 5918 5734 564 195 81 16 chr17 36085097 36085220 -53419333 - L1ME3 LINE L1 -159 6003 5873 786 10 42 0 chr17 36085226 36085322 -53419231 - L1PA4 LINE L1 -3 6152 6053 556 273 29 47 chr17 36136224 36136396 -53368157 + MIR3 SINE MIR 19 187 -21 501 295 101 25 chr17 36136756 36137116 -53367437 - L2 LINE L2 -5 3308 2828 502 253 102 36 chr17 36137159 36137522 -53367031 - L1MC5 LINE L1 -46 7915 7529 4535 209 68 38 chr17 36137624 36137698 -53366855 - L1ME3 LINE L1 -764 5382 5312 1903 156 3 10 chr17 36137698 36138012 -53366541 + AluJo SINE Alu 1 312 0 4535 209 68 38 chr17 36138012 36138722 -53365831 - L1ME3 LINE L1 -834 5312 4536 1813 169 0 17 chr17 36138722 36139018 -53365535 - AluJo SINE Alu -21 291 1 4535 209 68 38 chr17 36139018 36139637 -53364916 - L1ME3 LINE L1 -1610 4536 3937 1917 134 7 4 chr17 36139640 36139917 -53364636 + AluSq SINE Alu 1 278 -35 189 0 0 0 chr17 36139940 36139961 -53364592 + (CA)n Simple_repeat Simple_repeat 2 22 0 834 137 0 8 chr17 36140342 36140473 -53364080 + FLAM_A SINE Alu 4 133 0 6267 154 36 73 chr17 36141080 36141462 -53363091 + Charlie1a DNA MER1_type 2 396 -2365 1495 175 52 15 chr17 36141462 36141730 -53362823 - AluJo SINE Alu -13 299 22 6267 154 36 73 chr17 36141730 36142856 -53361697 + Charlie1a DNA MER1_type 396 1455 0 1312 78 0 51 chr17 36143239 36143456 -53361097 + L1MA8 LINE L1 5903 6108 -183 787 133 31 61 chr17 36143494 36143690 -53360863 + L1MA8 LINE L1 6097 6286 -5 261 222 0 0 chr17 36144369 36144432 -53360121 + (TA)n Simple_repeat Simple_repeat 2 64 0 1991 139 0 3 chr17 36144432 36144719 -53359834 - AluSx SINE Alu -26 286 1 32 43 0 0 chr17 36144727 36144773 -53359780 + AT_rich Low_complexity Low_complexity 1 46 0 995 135 0 0 chr17 36144795 36144936 -53359617 - AluJb SINE Alu -171 141 1 1591 163 48 11 chr17 36144956 36145226 -53359327 - AluJo SINE Alu -22 290 11 1455 100 66 0 chr17 36145326 36145585 -53358968 - L1MB3 LINE L1 -208 5975 5700 1232 230 19 41 chr17 36145584 36146001 -53358552 - L1ME3 LINE L1 -2357 3789 3382 * 812 271 65 0 chr17 36146010 36146209 -53358344 + MER58A DNA MER1_type 13 224 0 753 227 9 22 chr17 36146217 36146394 -53358159 - L1ME3 LINE L1 -2764 3382 3204 2080 152 0 7 chr17 36146394 36146704 -53357849 - AluJb SINE Alu 0 312 5 753 227 9 22 chr17 36146704 36146847 -53357706 - L1ME3 LINE L1 -2942 3204 2946 266 261 51 51 chr17 36147003 36147141 -53357412 - L2 LINE L2 -1477 1837 1700 2106 150 0 0 chr17 36147473 36147766 -53356787 + AluSx SINE Alu 1 293 -19 21 36 0 0 chr17 36148822 36148850 -53355703 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr17 36149195 36149218 -53355335 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 32 0 0 0 chr17 36149464 36149496 -53355057 + AT_rich Low_complexity Low_complexity 1 32 0 663 253 112 49 chr17 36149752 36150275 -53354278 - L2 LINE L2 -1 3312 2707 435 101 29 29 chr17 36150278 36150347 -53354206 - AluSg/x SINE Alu -25 284 216 1490 192 88 108 chr17 36150447 36150590 -53353963 - L2 LINE L2 -933 2381 2237 2199 117 0 16 chr17 36150590 36150907 -53353646 + AluSx SINE Alu 1 312 0 1490 192 88 108 chr17 36150907 36151283 -53353270 - L2 LINE L2 -1077 2237 1872 2270 108 3 0 chr17 36151832 36152129 -53352424 + AluSq SINE Alu 1 298 -15 2017 156 10 0 chr17 36153295 36153603 -53350950 - AluSx SINE Alu -1 311 1 263 240 0 13 chr17 36153614 36153689 -53350864 - L1ME LINE L1 -288 5833 5760 1603 31 5 0 chr17 36153983 36154177 -53350376 + L1PA4 LINE L1 5954 6148 -7 32 0 0 0 chr17 36154177 36154209 -53350344 + AT_rich Low_complexity Low_complexity 1 32 0 3187 256 133 42 chr17 36154539 36155051 -53349502 + L2 LINE L2 1313 1777 -1537 2465 61 0 0 chr17 36155051 36155348 -53349205 + AluY SINE Alu 1 297 -14 3187 256 133 42 chr17 36155348 36156137 -53348416 + L2 LINE L2 1777 2733 -581 458 289 64 80 chr17 36156138 36156512 -53348041 + L1MEd LINE L1 108 475 -5730 314 311 160 20 chr17 36156513 36156819 -53347734 + L1MEd LINE L1 573 921 -5284 1317 240 84 0 chr17 36156973 36157448 -53347105 + L1ME3A LINE L1 5651 6165 -5 476 279 117 11 chr17 36157472 36158066 -53346487 + L1MEd LINE L1 1081 1702 -4513 2161 106 23 3 chr17 36158106 36158407 -53346146 + AluSx SINE Alu 1 307 -5 320 252 38 61 chr17 36158419 36158457 -53346096 + L1MEd LINE L1 2184 2221 -4175 1359 76 0 5 chr17 36158457 36158642 -53345911 - L1PB1 LINE L1 0 6151 5968 320 252 38 61 chr17 36158642 36158734 -53345819 + L1MEd LINE L1 2221 2311 -4085 306 265 41 10 chr17 36158741 36158839 -53345714 + L1MEd LINE L1 2295 2395 -3820 2232 127 3 0 chr17 36158839 36159147 -53345406 + AluSq SINE Alu 1 309 -4 1870 159 3 20 chr17 36159154 36159455 -53345098 + AluJb SINE Alu 1 296 -16 221 167 0 37 chr17 36159460 36159514 -53345039 + G-rich Low_complexity Low_complexity 2 53 0 2146 118 3 16 chr17 36159581 36159895 -53344658 + AluSp SINE Alu 1 310 -3 380 129 0 14 chr17 36159895 36159965 -53344588 + (GGAA)n Simple_repeat Simple_repeat 1 69 0 1307 244 90 39 chr17 36160017 36161046 -53343507 + L1MEd LINE L1 2405 3552 -2663 2150 110 3 3 chr17 36161056 36161365 -53343188 + AluSg SINE Alu 1 309 -1 692 171 0 16 chr17 36161480 36161603 -53342950 + AluSg/x SINE Alu 184 304 -8 21 0 0 0 chr17 36161631 36161652 -53342901 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr17 36162238 36162262 -53342291 + AT_rich Low_complexity Low_complexity 1 24 0 2046 208 106 37 chr17 36162586 36163229 -53341324 + L1MC4 LINE L1 7352 8038 -4 702 303 57 35 chr17 36163351 36163579 -53340974 - MIR SINE MIR -17 245 13 559 304 57 40 chr17 36163735 36164078 -53340475 + L2 LINE L2 2761 3102 -170 372 258 40 16 chr17 36164147 36164271 -53340282 + MLT1L LTR MaLR 33 159 -456 1865 168 7 3 chr17 36164431 36164734 -53339819 - AluJb SINE Alu -8 304 1 2417 103 3 0 chr17 36164757 36165069 -53339484 - AluSp SINE Alu 0 313 1 428 249 122 16 chr17 36165093 36165282 -53339271 + MLT1L LTR MaLR 399 607 -8 2080 123 0 0 chr17 36165787 36166071 -53338482 + AluSx SINE Alu 1 287 -25 198 0 0 0 chr17 36166071 36166093 -53338460 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1879 153 7 26 chr17 36166749 36167056 -53337497 - AluJb SINE Alu -11 301 1 209 294 252 36 chr17 36167632 36167938 -53336615 + L2 LINE L2 2476 2847 -467 221 246 43 43 chr17 36168447 36168516 -53336037 - MIR SINE MIR -192 70 2 213 39 0 0 chr17 36169675 36169701 -53334852 + (GGA)n Simple_repeat Simple_repeat 2 27 0 450 261 97 18 chr17 36170876 36171041 -53333512 + MER5B DNA MER1_type 1 178 0 364 216 0 0 chr17 36171396 36171470 -53333083 - MIR SINE MIR 0 262 189 2380 75 0 3 chr17 36171791 36172098 -53332455 - AluY SINE Alu -5 306 1 576 175 195 32 chr17 36172468 36172494 -53332059 - MER33 DNA MER1_type -2262 362 342 1753 164 17 10 chr17 36172494 36172793 -53331760 + AluJb SINE Alu 1 301 -11 576 175 195 32 chr17 36172793 36173047 -53331506 - MER33 DNA MER1_type -2282 342 1 394 298 92 0 chr17 36173946 36174087 -53330466 + MIR SINE MIR 28 181 -81 2046 110 0 57 chr17 36174323 36174640 -53329913 + AluSx SINE Alu 1 299 -13 1095 251 116 78 chr17 36174683 36175269 -53329284 + L2 LINE L2 2157 2764 -550 2052 72 62 14 chr17 36175475 36175765 -53328788 - AluY SINE Alu -7 304 1 932 274 203 5 chr17 36175873 36176278 -53328275 + L2 LINE L2 2825 3309 -4 471 293 92 0 chr17 36177016 36177180 -53327373 - MIR SINE MIR 0 262 84 24 0 0 0 chr17 36177219 36177243 -53327310 + AT_rich Low_complexity Low_complexity 1 24 0 2083 114 50 26 chr17 36177272 36177615 -53326938 + THE1B LTR MaLR 1 351 -13 238 266 106 43 chr17 36177678 36177772 -53326781 - MIR3 SINE MIR -95 113 14 547 212 111 69 chr17 36178073 36178262 -53326291 + MIR SINE MIR 66 262 0 1773 162 7 10 chr17 36178600 36178890 -53325663 - AluJo SINE Alu -23 289 1 649 171 12 26 chr17 36178892 36179052 -53325501 - MER20 DNA MER1_type -13 206 55 223 307 160 25 chr17 36179138 36179376 -53325177 - L2 LINE L2 -192 3080 2811 248 315 22 11 chr17 36180071 36180160 -53324393 - MER5A DNA MER1_type -61 128 39 296 259 185 0 chr17 36180200 36180308 -53324245 + MIR SINE MIR 120 247 -15 280 281 247 0 chr17 36180402 36180491 -53324062 + L2 LINE L2 3162 3272 0 879 134 0 8 chr17 36180565 36180692 -53323861 + AluJo/FLAM SINE Alu 1 126 -186 1505 172 83 3 chr17 36180693 36180983 -53323570 + AluSq SINE Alu 1 313 0 319 261 104 37 chr17 36181036 36181170 -53323383 + MIR3 SINE MIR 38 180 -28 1022 262 132 17 chr17 36182518 36183183 -53321370 + L2 LINE L2 2552 3299 -14 264 234 112 19 chr17 36183260 36183367 -53321186 - MIR SINE MIR -11 251 135 2242 210 21 10 chr17 36183379 36183988 -53320565 + L1MC/D LINE L1 4404 5019 -1127 320 208 121 45 chr17 36183989 36184125 -53320428 - MIR SINE MIR -62 146 3 2367 85 7 0 chr17 36184153 36184448 -53320105 - AluSg SINE Alu -13 297 1 428 164 27 0 chr17 36184709 36184782 -53319771 - L2 LINE L2 0 3313 3239 589 194 31 12 chr17 36184828 36184988 -53319565 - Charlie5 DNA MER1_type -35 2577 2415 1299 144 44 0 chr17 36184993 36185235 -53319318 - Tigger3(Golem) DNA MER2_type -1 3037 2755 450 0 0 0 chr17 36185235 36185285 -53319268 + (CA)n Simple_repeat Simple_repeat 1 50 0 1299 144 44 0 chr17 36185285 36185305 -53319248 - Tigger3(Golem) DNA MER2_type -283 2755 2737 1762 122 0 8 chr17 36185305 36185551 -53319002 + AluSp SINE Alu 47 290 -23 35 41 0 0 chr17 36185589 36185638 -53318915 + AT_rich Low_complexity Low_complexity 1 49 0 485 153 188 0 chr17 36185638 36185723 -53318830 - AluJ/FLAM SINE Alu -211 101 1 550 260 176 36 chr17 36186054 36186255 -53318298 + L1MC/D LINE L1 5296 5468 -2340 3637 81 7 68 chr17 36186255 36186845 -53317708 + MER41A LTR ERV1 1 554 0 550 260 176 36 chr17 36186845 36187001 -53317552 + L1MC/D LINE L1 5468 5703 -2105 654 228 72 12 chr17 36187035 36187202 -53317351 + MIR SINE MIR 76 252 -10 428 337 75 5 chr17 36187600 36187799 -53316754 - MIR SINE MIR 0 262 50 220 313 261 0 chr17 36188730 36188845 -53315708 - L2 LINE L2 0 3272 3128 634 263 78 26 chr17 36189094 36189326 -53315227 - MIR SINE MIR -10 252 9 1688 114 2 143 chr17 36189634 36190027 -53314526 + MER47A DNA MER2_type 29 366 0 231 204 0 0 chr17 36190029 36190078 -53314475 + (TG)n Simple_repeat Simple_repeat 2 50 0 284 304 56 43 chr17 36190122 36190283 -53314270 - MIR SINE MIR -13 249 87 32 43 0 0 chr17 36191288 36191334 -53313219 + AT_rich Low_complexity Low_complexity 1 46 0 1934 162 3 0 chr17 36191417 36191714 -53312839 - AluJo SINE Alu -14 298 1 345 270 60 0 chr17 36191875 36191975 -53312578 - MIR SINE MIR -20 242 137 259 284 0 0 chr17 36192193 36192260 -53312293 + MER5A DNA MER1_type 9 75 -114 2006 149 23 0 chr17 36192260 36192561 -53311992 + AluSx SINE Alu 2 309 -3 2195 112 44 0 chr17 36192567 36192862 -53311691 + AluSx SINE Alu 1 308 -4 220 188 21 0 chr17 36192865 36192913 -53311640 + MER5A DNA MER1_type 61 109 -80 5970 28 5 1 chr17 36193099 36193754 -53310799 + SVA Other Other 722 1378 -8 339 212 120 54 chr17 36194085 36194269 -53310284 + MIR3 SINE MIR 10 205 -3 195 42 0 0 chr17 36194308 36194332 -53310221 + (TTCC)n Simple_repeat Simple_repeat 2 25 0 292 296 91 0 chr17 36194595 36194727 -53309826 + MIR3 SINE MIR 20 163 -45 369 268 140 18 chr17 36196730 36196793 -53307760 - L2 LINE L2 -307 3006 2952 2224 116 0 7 chr17 36196793 36197096 -53307457 + AluSq SINE Alu 1 301 -12 369 268 140 18 chr17 36197096 36197232 -53307321 - L2 LINE L2 -361 2952 2785 991 206 47 5 chr17 36197571 36197785 -53306768 - MIR SINE MIR -28 234 12 2142 118 6 16 chr17 36197916 36198229 -53306324 - AluSx SINE Alu -2 310 1 395 294 124 13 chr17 36198301 36198454 -53306099 - MIR SINE MIR -73 189 20 187 273 18 0 chr17 36198453 36198508 -53306045 - L2 LINE L2 -1 3271 3216 * 634 289 75 99 chr17 36198769 36198953 -53305600 + MLT1J LTR MaLR 34 221 -290 2171 95 13 23 chr17 36198953 36199257 -53305296 + AluSx SINE Alu 1 301 -11 634 289 75 99 chr17 36199257 36199472 -53305081 + MLT1J LTR MaLR 221 423 -88 1888 134 17 7 chr17 36199472 36199764 -53304789 - AluSx SINE Alu -17 295 1 634 289 75 99 chr17 36199764 36199806 -53304747 + MLT1J LTR MaLR 423 465 -46 1855 209 76 0 chr17 36200304 36200806 -53303747 - L1M4 LINE L1 -1890 4256 3676 2014 208 117 25 chr17 36200818 36201333 -53303220 - MER68 LTR ERV1 0 562 1 556 295 83 14 chr17 36201919 36202136 -53302417 - MIR SINE MIR 0 262 31 2124 143 3 0 chr17 36202158 36202466 -53302087 - AluJo SINE Alu -3 309 1 254 222 16 151 chr17 36202731 36202857 -53301696 + MER20B DNA MER1_type 59 167 -616 2425 107 8 30 chr17 36204243 36204606 -53299947 + THE1A LTR MaLR 1 355 0 12280 83 1 2 chr17 36204606 36206187 -53298366 + THE1A-int LTR MaLR 1 1580 0 2584 114 8 0 chr17 36206187 36206539 -53298014 + THE1A LTR MaLR 1 355 0 3841 152 78 1 chr17 36206658 36207351 -53297202 + L1MB3 LINE L1 5435 6180 -3 341 269 0 0 chr17 36207801 36207879 -53296674 + L1MC/D LINE L1 5525 5602 -2206 294 241 170 7 chr17 36207892 36208039 -53296514 + L1M4c LINE L1 1558 2110 -4273 1641 94 0 0 chr17 36208177 36208378 -53296175 + AluSg/x SINE Alu 84 284 -26 1316 157 0 57 chr17 36208792 36209022 -53295531 + AluJo SINE Alu 17 233 -79 577 255 108 37 chr17 36209223 36209576 -53294977 + L1M4c LINE L1 3638 4015 -2367 1052 205 163 6 chr17 36209578 36209910 -53294643 - HsTC2 DNA Tc2 0 1898 1515 411 226 12 0 chr17 36209900 36209984 -53294569 - HsTC2 DNA Tc2 -543 1355 1271 * 709 157 0 0 chr17 36210031 36210146 -53294407 + AluJo SINE Alu 2 116 -186 504 0 0 0 chr17 36210146 36210202 -53294351 + (CATA)n Simple_repeat Simple_repeat 3 58 0 703 159 45 0 chr17 36210792 36210968 -53293585 + FLAM_C SINE Alu 6 187 0 1057 167 12 0 chr17 36210969 36211137 -53293416 + AluJo SINE Alu 121 290 -22 2103 116 27 3 chr17 36211202 36211496 -53293057 + AluSq SINE Alu 1 301 -12 324 273 78 23 chr17 36211639 36211767 -53292786 - MLT1L LTR MaLR -165 450 316 794 158 0 29 chr17 36211807 36211946 -53292607 + AluJo SINE Alu 2 136 -176 953 268 125 8 chr17 36211957 36212326 -53292227 - MER57B LTR ERV1 0 434 23 2109 102 13 26 chr17 36212330 36212633 -53291920 - AluSq SINE Alu -14 299 1 2052 114 28 0 chr17 36212650 36212940 -53291613 - AluSx SINE Alu -14 298 1 518 252 29 66 chr17 36212988 36213230 -53291323 - MLT1L LTR MaLR -366 249 17 201 288 163 25 chr17 36213290 36213450 -53291103 - MIR SINE MIR -49 213 32 2205 134 0 0 chr17 36213739 36214038 -53290515 + AluSx SINE Alu 1 299 -13 24 0 0 0 chr17 36214143 36214167 -53290386 + AT_rich Low_complexity Low_complexity 1 24 0 511 92 0 0 chr17 36214167 36214232 -53290321 - U6 snRNA snRNA -42 65 1 448 273 62 40 chr17 36214344 36214520 -53290033 - L1M4 LINE L1 -1970 4176 3997 437 278 80 17 chr17 36214822 36214998 -53289555 + MIR SINE MIR 59 245 -17 778 205 72 0 chr17 36215061 36215227 -53289326 + MER45A DNA AcHobo 1 178 0 210 293 12 24 chr17 36215655 36215737 -53288816 + MIR SINE MIR 179 259 -3 2235 102 30 3 chr17 36216369 36216672 -53287881 - AluSx SINE Alu -1 311 1 1658 130 45 41 chr17 36217039 36217331 -53287222 + AluSx SINE Alu 5 297 -15 359 273 167 0 chr17 36217384 36217534 -53287019 + MIR SINE MIR 58 232 -30 1744 101 124 4 chr17 36217555 36217812 -53286741 - AluSq SINE Alu -25 288 1 242 247 21 31 chr17 36218743 36218816 -53285737 + G-rich Low_complexity Low_complexity 5 78 -22 189 0 0 0 chr17 36218816 36218837 -53285716 + (CCGGG)n Simple_repeat Simple_repeat 4 24 0 242 247 21 31 chr17 36218837 36218860 -53285693 + G-rich Low_complexity Low_complexity 78 100 0 26 50 0 0 chr17 36219043 36219083 -53285470 + GC_rich Low_complexity Low_complexity 1 40 0 1724 178 31 0 chr17 36220777 36221063 -53283490 - AluJb SINE Alu -17 295 1 1605 169 30 17 chr17 36221643 36221938 -53282615 - AluJb SINE Alu -13 299 1 184 211 39 19 chr17 36222246 36222298 -53282255 - L3b LINE CR1 -331 1252 1200 2217 110 7 0 chr17 36222413 36222712 -53281841 + AluSq SINE Alu 1 301 -12 189 279 44 29 chr17 36223042 36223110 -53281443 - MER5A DNA MER1_type -50 139 71 25 31 0 0 chr17 36223114 36223146 -53281407 + AT_rich Low_complexity Low_complexity 1 32 0 1944 103 0 96 chr17 36223197 36223533 -53281020 - AluSx SINE Alu 0 306 1 2056 127 14 3 chr17 36223535 36223826 -53280727 - AluSx SINE Alu -17 295 2 2142 109 17 0 chr17 36223886 36224179 -53280374 - AluSx SINE Alu -9 303 6 225 222 0 0 chr17 36224189 36224234 -53280319 + MER5B DNA MER1_type 134 178 0 2281 129 0 0 chr17 36224333 36224642 -53279911 - AluSx SINE Alu -3 309 1 599 238 63 68 chr17 36225234 36225440 -53279113 + MIR SINE MIR 47 251 -11 1300 80 0 6 chr17 36228825 36228987 -53275566 + AluSx SINE Alu 9 169 -143 2020 132 0 39 chr17 36229144 36229455 -53275098 - AluSx SINE Alu -13 299 1 1804 186 7 3 chr17 36229539 36229840 -53274713 + AluJo SINE Alu 1 302 -10 198 321 28 18 chr17 36229927 36230036 -53274517 - MER5A DNA MER1_type 0 189 80 239 293 15 75 chr17 36230133 36230266 -53274287 - MIR SINE MIR -64 144 20 842 41 0 0 chr17 36230282 36230380 -53274173 + MER30 DNA MER1_type 3 100 -130 471 229 85 25 chr17 36230566 36230812 -53273741 - MER5C DNA MER1_type -2 322 1 221 175 38 12 chr17 36231010 36231090 -53273463 + (TTTAA)n Simple_repeat Simple_repeat 3 84 0 2216 96 11 0 chr17 36231414 36231741 -53272812 - AluSp SINE Alu 0 331 2 398 96 0 0 chr17 36231764 36231816 -53272737 - MER66A LTR ERV1 -140 338 287 2454 93 0 3 chr17 36231846 36232157 -53272396 + AluSx SINE Alu 1 310 -2 461 270 98 0 chr17 36233412 36233575 -53270978 - MIR SINE MIR -3 259 81 306 50 0 0 chr17 36234337 36234377 -53270176 + (TG)n Simple_repeat Simple_repeat 1 40 0 2383 92 3 0 chr17 36235085 36235379 -53269174 - AluSp SINE Alu -18 295 1 958 211 32 113 chr17 36235397 36235541 -53269012 - L1MD1 LINE L1 -16 6226 6072 255 61 0 0 chr17 36235541 36235574 -53268979 + (TG)n Simple_repeat Simple_repeat 2 34 0 958 211 32 113 chr17 36235574 36235808 -53268745 - L1MD1 LINE L1 -170 6072 5879 2096 144 0 0 chr17 36235843 36236142 -53268411 - AluJb SINE Alu -13 299 1 348 130 19 0 chr17 36236147 36236201 -53268352 - FLAM SINE Alu -4 129 75 1999 164 26 72 chr17 36236201 36236507 -53268046 - L1MD1 LINE L1 -472 5887 5569 2039 124 3 13 chr17 36236507 36236805 -53267748 - AluSx SINE Alu -17 295 1 1999 164 26 72 chr17 36236805 36236921 -53267632 - L1MD1 LINE L1 -790 5569 5485 2086 141 0 3 chr17 36236921 36237226 -53267327 - AluSx SINE Alu -8 304 1 1999 164 26 72 chr17 36237226 36237259 -53267294 - L1MD1 LINE L1 -874 5485 5452 1694 177 7 0 chr17 36237685 36237968 -53266585 + AluJb SINE Alu 15 299 -13 230 204 0 19 chr17 36238099 36238153 -53266400 + (TA)n Simple_repeat Simple_repeat 2 54 0 256 251 5 163 chr17 36240339 36240386 -53264167 + MER5A DNA MER1_type 7 60 -129 2348 81 13 7 chr17 36240386 36240684 -53263869 + AluSx SINE Alu 1 300 -12 256 251 5 163 chr17 36240684 36240723 -53263830 + MER5A DNA MER1_type 60 103 -86 2296 120 0 3 chr17 36240723 36241024 -53263529 + AluSx SINE Alu 1 300 -12 256 251 5 163 chr17 36241024 36241139 -53263414 + MER5A DNA MER1_type 103 177 -12 1085 152 11 0 chr17 36241991 36242169 -53262384 - AluSg/x SINE Alu -3 309 130 2400 92 3 9 chr17 36242552 36242867 -53261686 - AluSp SINE Alu 0 313 1 2415 99 3 0 chr17 36244655 36244967 -53259586 - AluSp SINE Alu 0 313 1 286 277 181 30 chr17 36245395 36245561 -53258992 + L2 LINE L2 2887 3077 -195 2203 102 3 3 chr17 36245724 36246018 -53258535 - AluSc SINE Alu -15 294 1 2264 100 10 0 chr17 36246161 36246452 -53258101 + AluSx SINE Alu 1 294 -18 1103 195 4 22 chr17 36246452 36246669 -53257884 + AluSg/x SINE Alu 73 287 -25 564 308 49 26 chr17 36248247 36248552 -53256001 + L3b LINE CR1 1129 1440 -143 813 246 128 79 chr17 36248556 36248822 -53255731 - MLT1H LTR MaLR 0 549 298 2394 93 7 0 chr17 36248822 36249123 -53255430 + AluSx SINE Alu 1 303 -9 813 246 128 79 chr17 36249123 36249360 -53255193 - MLT1H LTR MaLR -251 298 28 2399 83 0 0 chr17 36249360 36249650 -53254903 - AluSg SINE Alu -20 290 1 813 246 128 79 chr17 36249650 36249680 -53254873 - MLT1H LTR MaLR -521 28 1 241 245 82 20 chr17 36249747 36249845 -53254708 + MER5B DNA MER1_type 4 107 -71 307 254 0 0 chr17 36250215 36250278 -53254275 + L2 LINE L2 3210 3272 0 198 293 0 17 chr17 36250588 36250646 -53253907 - L2 LINE L2 0 3313 3257 478 340 56 46 chr17 36250670 36250922 -53253631 - L2 LINE L2 -312 3001 2741 2281 115 0 13 chr17 36250922 36251236 -53253317 + AluSq SINE Alu 1 310 -3 478 340 56 46 chr17 36251236 36251464 -53253089 - L2 LINE L2 -572 2741 2517 2455 86 7 0 chr17 36251464 36251765 -53252788 + AluSp SINE Alu 1 303 -10 2706 173 34 27 chr17 36251969 36252431 -53252122 - LTR26B LTR ERV1 0 531 62 2134 100 14 0 chr17 36252431 36252748 -53251805 - AluSq SINE Alu 0 321 1 2706 173 34 27 chr17 36252748 36252811 -53251742 - LTR26B LTR ERV1 -469 62 1 2437 71 0 3 chr17 36252923 36253220 -53251333 + AluY SINE Alu 1 296 -15 193 271 21 0 chr17 36253235 36253283 -53251270 - L2 LINE L2 -20 3252 3204 232 226 48 0 chr17 36253308 36253370 -53251183 - MIR SINE MIR -117 145 81 462 218 0 30 chr17 36253650 36253751 -53250802 + U13 snRNA snRNA 5 102 -2 366 312 148 20 chr17 36254433 36254635 -53249918 - MIR SINE MIR -34 228 1 396 296 88 19 chr17 36255315 36255474 -53249079 + L2 LINE L2 3103 3272 0 208 197 13 66 chr17 36255525 36255601 -53248952 + CT-rich Low_complexity Low_complexity 3 74 0 391 233 22 11 chr17 36256054 36256144 -53248409 - MIR3 SINE MIR -25 183 93 2048 123 40 0 chr17 36257140 36257441 -53247112 - AluSp SINE Alu 0 313 1 681 145 29 65 chr17 36257465 36257493 -53247060 - FLAM_C SINE Alu -169 133 106 1522 189 15 4 chr17 36257493 36257757 -53246796 + AluJo SINE Alu 12 278 -34 681 145 29 65 chr17 36257757 36257866 -53246687 - FLAM_C SINE Alu -196 106 1 971 147 18 12 chr17 36257877 36258040 -53246513 - AluJb SINE Alu -12 300 137 2352 104 0 0 chr17 36258043 36258341 -53246212 - AluSx SINE Alu -14 298 1 201 39 0 0 chr17 36258810 36258836 -53245717 + (TG)n Simple_repeat Simple_repeat 1 26 0 2396 81 0 0 chr17 36259702 36259713 -53244840 - AluY SINE Alu -14 297 287 198 0 0 0 chr17 36259713 36259735 -53244818 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2396 81 0 0 chr17 36259735 36260020 -53244533 - AluY SINE Alu -23 288 1 2248 123 0 0 chr17 36260089 36260389 -53244164 + AluSx SINE Alu 1 300 -12 948 181 6 0 chr17 36260389 36260555 -53243998 + AluJb SINE Alu 137 303 -9 210 37 0 0 chr17 36260587 36260614 -53243939 + (CAA)n Simple_repeat Simple_repeat 2 28 0 182 330 45 11 chr17 36260643 36260731 -53243822 - MIR SINE MIR -4 258 168 2157 113 3 7 chr17 36262099 36262399 -53242154 - AluSx SINE Alu -13 299 1 2348 112 0 3 chr17 36262607 36262911 -53241642 + AluSx SINE Alu 1 303 -9 190 211 0 39 chr17 36262963 36263015 -53241538 + L2 LINE L2 3187 3236 -77 1130 157 0 0 chr17 36263105 36263264 -53241289 + AluJb SINE Alu 137 295 -17 1316 121 16 0 chr17 36263515 36263705 -53240848 - AluSg/x SINE Alu -18 294 102 1273 166 96 33 chr17 36263764 36264035 -53240518 + AluJo SINE Alu 1 288 -24 2341 99 3 10 chr17 36265287 36265601 -53238952 - AluSx SINE Alu 0 312 1 2198 116 7 0 chr17 36266105 36266406 -53238147 - AluSx SINE Alu -9 303 1 212 258 15 15 chr17 36266870 36266936 -53237617 - L2 LINE L2 -630 2684 2619 358 274 148 15 chr17 36266943 36267078 -53237475 - L2 LINE L2 -42 3271 3119 880 144 40 64 chr17 36267098 36267246 -53237307 + FRAM SINE Alu 1 146 -166 261 0 0 0 chr17 36267246 36267275 -53237278 + (CA)n Simple_repeat Simple_repeat 1 29 0 880 144 40 64 chr17 36267275 36267299 -53237254 + FRAM SINE Alu 146 169 -7 240 306 18 36 chr17 36267299 36267410 -53237143 - L2 LINE L2 -284 3029 2921 2422 95 0 9 chr17 36267506 36267821 -53236732 - AluSx SINE Alu 0 312 1 708 243 142 24 chr17 36267847 36268166 -53236387 - L2 LINE L2 -1144 2170 1787 2212 107 10 0 chr17 36268166 36268457 -53236096 + AluSp SINE Alu 1 294 -19 708 243 142 24 chr17 36268457 36268561 -53235992 - L2 LINE L2 -1527 1787 1697 2337 97 0 0 chr17 36268623 36268923 -53235630 + AluSc SINE Alu 1 300 -9 1878 131 14 14 chr17 36268934 36269225 -53235328 + AluJb SINE Alu 1 291 -21 2055 219 133 47 chr17 36269240 36269826 -53234727 - L1ME3A LINE L1 -5 6165 5508 2345 98 7 3 chr17 36269826 36270132 -53234421 - AluSx SINE Alu -2 310 4 2055 219 133 47 chr17 36270132 36270247 -53234306 - L1ME3A LINE L1 -662 5508 5404 193 250 0 15 chr17 36270253 36270321 -53234232 - L2 LINE L2 -1612 1702 1636 591 262 76 19 chr17 36270395 36270605 -53233948 + MIR SINE MIR 21 242 -20 2155 122 7 0 chr17 36272139 36272433 -53232120 + AluSq SINE Alu 1 296 -17 286 155 12 12 chr17 36272435 36272519 -53232034 + (TA)n Simple_repeat Simple_repeat 1 84 0 2354 88 0 7 chr17 36272716 36273013 -53231540 - AluSc SINE Alu -14 295 1 2103 128 10 0 chr17 36273316 36273612 -53230941 + AluSx SINE Alu 2 300 -12 1611 177 19 32 chr17 36273782 36273954 -53230599 - AluJo SINE Alu -6 306 133 227 31 31 0 chr17 36273954 36273986 -53230567 + (TTA)n Simple_repeat Simple_repeat 2 34 0 2488 58 0 3 chr17 36273986 36274280 -53230273 - AluY SINE Alu -18 293 1 1611 177 19 32 chr17 36274280 36274416 -53230137 - AluJo SINE Alu -177 135 1 2135 116 3 7 chr17 36274575 36274894 -53229659 - AluSq SINE Alu 0 313 1 2555 58 0 0 chr17 36276019 36276327 -53228226 - AluY SINE Alu -3 308 1 203 392 0 10 chr17 36276559 36276656 -53227897 + L2 LINE L2 3107 3202 -70 2418 79 0 0 chr17 36276734 36277024 -53227529 + AluSx SINE Alu 1 290 -22 287 314 22 36 chr17 36277224 36277361 -53227192 - MIR SINE MIR -127 135 1 813 173 0 0 chr17 36277406 36277539 -53227014 + AluJo/FLAM SINE Alu 1 133 -179 2046 124 10 7 chr17 36277541 36277668 -53226885 + AluSg SINE Alu 1 126 -184 6811 27 0 0 chr17 36277668 36278442 -53226111 + L1PA3 LINE L1 5374 6147 -8 1475 75 16 0 chr17 36278442 36278630 -53225923 + AluY SINE Alu 119 309 -2 2046 124 10 7 chr17 36278630 36278800 -53225753 + AluSg SINE Alu 125 300 -10 226 291 29 29 chr17 36279338 36279441 -53225112 + MIR3 SINE MIR 81 183 -25 1911 148 3 30 chr17 36279785 36280088 -53224465 - AluJb SINE Alu -17 295 1 2238 114 0 0 chr17 36280093 36280390 -53224163 - AluSq SINE Alu -16 297 1 2365 93 3 0 chr17 36280396 36280698 -53223855 - AluSp SINE Alu -10 303 1 195 265 161 37 chr17 36280744 36280906 -53223647 - L2 LINE L2 -12 3301 3120 249 300 42 40 chr17 36280978 36281133 -53223420 + MIR SINE MIR 1 141 -67 2215 93 17 0 chr17 36281146 36281437 -53223116 + AluSq SINE Alu 7 302 -11 513 306 91 24 chr17 36281950 36282159 -53222394 + MIR SINE MIR 23 245 -17 312 228 31 47 chr17 36282582 36282709 -53221844 - MIR SINE MIR -27 235 111 359 217 14 0 chr17 36282803 36282872 -53221681 - MIR SINE MIR -165 97 28 182 271 102 51 chr17 36282989 36283107 -53221446 - L2 LINE L2 -21 3251 3128 385 333 41 7 chr17 36285547 36285694 -53218859 + MIR SINE MIR 40 191 -71 632 221 87 6 chr17 36285836 36286008 -53218545 - MIR SINE MIR -3 259 74 2297 131 12 12 chr17 36287550 36287887 -53216666 - MER1B DNA MER1_type 0 337 1 2018 136 24 3 chr17 36288467 36288762 -53215791 + AluJb SINE Alu 1 301 -11 209 320 10 21 chr17 36289955 36290052 -53214501 + L3 LINE CR1 1131 1226 -351 215 295 98 33 chr17 36290135 36290257 -53214296 + L3 LINE CR1 1343 1472 -105 261 316 75 29 chr17 36291132 36291306 -53213247 - MIR SINE MIR -73 189 8 213 315 144 0 chr17 36291906 36292017 -53212536 - MIR SINE MIR 0 262 136 319 288 59 7 chr17 36292288 36292441 -53212112 - MER103 DNA DNA -3 163 3 2014 146 3 3 chr17 36292874 36293175 -53211378 + AluSx SINE Alu 1 301 -11 1111 223 17 4 chr17 36294898 36295136 -53209417 + MIR SINE MIR 21 261 -1 183 244 44 0 chr17 36295154 36295199 -53209354 - L2 LINE L2 -5 3267 3221 2243 104 21 0 chr17 36297379 36297668 -53206885 - AluSg SINE Alu -14 296 2 1698 163 17 17 chr17 36299084 36299210 -53205343 + AluJo SINE Alu 10 135 -177 2549 53 0 10 chr17 36299210 36299543 -53205010 + AluY SINE Alu 1 311 0 1698 163 17 17 chr17 36299543 36299704 -53204849 + AluJo SINE Alu 134 297 -15 1902 148 0 30 chr17 36300100 36300404 -53204149 + AluSx SINE Alu 1 295 -17 407 244 119 18 chr17 36301603 36301771 -53202782 - MIR SINE MIR -28 234 50 688 228 116 16 chr17 36301780 36301969 -53202584 - MER3 DNA MER1_type 0 209 2 2180 100 3 51 chr17 36304526 36304837 -53199716 + AluSx SINE Alu 1 296 -16 994 121 92 0 chr17 36305490 36305631 -53198922 + FRAM SINE Alu 1 153 -23 1970 112 51 4 chr17 36306935 36307211 -53197342 + AluSx SINE Alu 1 289 -23 2334 115 7 0 chr17 36307227 36307532 -53197021 + AluSx SINE Alu 1 307 -5 2338 113 3 0 chr17 36307583 36307894 -53196659 + AluSp SINE Alu 1 312 -1 340 339 62 0 chr17 36307899 36308029 -53196524 + MIR3 SINE MIR 31 168 -40 371 293 111 21 chr17 36308902 36309092 -53195461 + MIR SINE MIR 18 216 -46 413 276 86 9 chr17 36313214 36313330 -53191223 + L2 LINE L2 3189 3313 0 486 299 82 16 chr17 36314392 36314586 -53189967 - MIR SINE MIR -51 211 5 326 265 103 8 chr17 36315167 36315284 -53189269 - MIR3 SINE MIR -78 130 3 395 285 42 7 chr17 36315893 36316037 -53188516 - MIR SINE MIR -86 176 28 1789 181 13 7 chr17 36317244 36317553 -53187000 + AluJo SINE Alu 1 311 -1 1789 193 0 7 chr17 36317561 36317867 -53186686 + AluJb SINE Alu 1 304 -8 736 180 112 12 chr17 36318267 36318428 -53186125 - MER45A DNA AcHobo -1 177 1 307 256 120 26 chr17 36318761 36318878 -53185675 - MIR SINE MIR -63 199 72 818 142 0 0 chr17 36318999 36319126 -53185427 + FLAM_C SINE Alu 1 127 -6 423 224 41 10 chr17 36319231 36319329 -53185224 - MIR3 SINE MIR -10 198 98 2632 46 10 0 chr17 36319924 36320228 -53184325 - AluY SINE Alu -4 307 1 208 232 130 14 chr17 36320252 36320321 -53184232 - MIR SINE MIR -29 233 157 194 217 67 67 chr17 36320506 36320566 -53183987 - MIR3 SINE MIR -140 68 9 233 284 0 15 chr17 36321119 36321186 -53183367 - MIR SINE MIR -195 67 2 2300 113 0 22 chr17 36321519 36321837 -53182716 + AluSx SINE Alu 1 311 -1 515 282 46 66 chr17 36322899 36323069 -53181484 + L1MC4 LINE L1 6575 6740 -1302 2055 138 24 0 chr17 36323069 36323365 -53181188 + AluSx SINE Alu 1 303 -9 515 282 46 66 chr17 36323365 36323435 -53181118 + L1MC4 LINE L1 6740 6810 -1232 338 111 95 0 chr17 36323435 36323498 -53181055 + Alu SINE Alu 234 302 0 819 273 46 28 chr17 36323501 36323783 -53180770 + L1MC4 LINE L1 6741 7027 -1015 506 153 54 45 chr17 36323822 36323933 -53180620 + L1MC4 LINE L1 7549 7660 -382 454 235 181 0 chr17 36324212 36324361 -53180192 - MIR SINE MIR 0 262 87 1668 223 16 83 chr17 36324672 36325229 -53179324 - MLT2B1 LTR ERVL 0 520 1 220 242 116 63 chr17 36325243 36325338 -53179215 - MIR3 SINE MIR -22 186 87 808 268 24 5 chr17 36326334 36326543 -53178010 - MIR SINE MIR -21 241 29 521 236 75 105 chr17 36326864 36327131 -53177422 - L2 LINE L2 0 3272 3014 381 179 74 11 chr17 36327156 36327251 -53177302 + MER5B DNA MER1_type 1 101 -77 269 311 90 40 chr17 36328061 36328238 -53176315 + MIR SINE MIR 33 218 -44 419 87 14 0 chr17 36328916 36328985 -53175568 + (TG)n Simple_repeat Simple_repeat 2 71 0 465 266 44 59 chr17 36329032 36329235 -53175318 - MIR SINE MIR -16 246 47 419 267 146 18 chr17 36330070 36330235 -53174318 - MIR SINE MIR -30 232 47 752 259 45 5 chr17 36331920 36332140 -53172413 + MIR SINE MIR 19 247 -15 1757 179 10 17 chr17 36332198 36332500 -53172053 - AluJo SINE Alu -12 300 1 235 287 17 11 chr17 36332585 36332687 -53171866 - MIR SINE MIR -59 149 83 744 224 39 0 chr17 36332729 36332885 -53171668 - FRAM SINE Alu -4 162 1 454 299 137 5 chr17 36333503 36333707 -53170846 + MIR SINE MIR 32 262 0 282 284 57 65 chr17 36333996 36334225 -53170328 - L2 LINE L2 -183 3089 2863 438 276 47 37 chr17 36334894 36335111 -53169442 + MIR SINE MIR 7 228 -34 366 188 150 45 chr17 36335238 36335371 -53169182 + MIR SINE MIR 116 262 0 1925 116 19 0 chr17 36335377 36335656 -53168897 - AluSx SINE Alu 0 304 21 198 237 17 17 chr17 36336695 36336754 -53167799 + L2 LINE L2 3251 3309 -4 723 276 19 9 chr17 36337846 36338056 -53166497 - MIR SINE MIR -8 254 43 1665 191 17 14 chr17 36338145 36338439 -53166114 - AluJo SINE Alu -17 295 1 236 288 25 0 chr17 36338439 36338513 -53166040 - MIR SINE MIR -134 128 53 359 259 170 7 chr17 36339393 36339528 -53165025 - MIR SINE MIR -86 176 20 237 250 0 0 chr17 36339708 36339764 -53164789 + MIR SINE MIR 88 143 -65 348 228 18 35 chr17 36339887 36340001 -53164552 + L2 LINE L2 2941 3052 -261 764 159 7 13 chr17 36340965 36341116 -53163437 + L1MB3 LINE L1 6032 6181 -2 243 61 0 0 chr17 36341839 36341872 -53162681 + (TG)n Simple_repeat Simple_repeat 1 33 0 198 0 0 0 chr17 36341871 36341893 -53162660 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 241 358 16 49 chr17 36342242 36342365 -53162188 + MIR SINE MIR 30 148 -60 315 313 10 10 chr17 36342531 36342630 -53161923 + MIR3 SINE MIR 109 207 -1 2265 113 0 0 chr17 36342935 36343254 -53161299 + AluSx SINE Alu 1 312 0 643 251 13 54 chr17 36343345 36343609 -53160944 - MIR SINE MIR -6 256 8 1945 238 71 18 chr17 36343670 36344322 -53160231 - L1ME LINE L1 -5375 695 10 552 286 146 19 chr17 36345430 36345643 -53158910 - MIR SINE MIR -13 249 10 369 344 120 10 chr17 36345797 36345989 -53158564 + MIR SINE MIR 43 255 -7 389 336 14 0 chr17 36346233 36346389 -53158164 - MIR3 SINE MIR -27 181 23 224 241 35 0 chr17 36346890 36346948 -53157605 + CT-rich Low_complexity Low_complexity 2 61 0 1223 281 27 27 chr17 36347708 36348152 -53156401 - LTR16A LTR ERVL -6 444 1 241 280 65 32 chr17 36348152 36348245 -53156308 + MIR3 SINE MIR 86 181 -27 * 1053 282 117 5 chr17 36348222 36348453 -53156100 - L2 LINE L2 -36 3277 3073 1160 143 84 5 chr17 36348453 36348656 -53155897 - MER20 DNA MER1_type 0 219 1 1053 282 117 5 chr17 36348656 36348942 -53155611 - L2 LINE L2 -240 3073 2683 209 291 38 13 chr17 36349153 36349232 -53155321 - MIR SINE MIR -71 137 57 280 316 61 17 chr17 36349705 36349877 -53154676 + MIR3 SINE MIR 5 180 -73 427 287 26 0 chr17 36350386 36350501 -53154052 + MIR SINE MIR 31 148 -114 4499 155 20 29 chr17 36350503 36350721 -53153832 + L1MB7 LINE L1 5112 5331 -853 2152 144 0 0 chr17 36350721 36351019 -53153534 + AluSx SINE Alu 1 298 -14 4499 155 20 29 chr17 36351019 36351865 -53152688 + L1MB7 LINE L1 5331 6174 -10 284 271 159 9 chr17 36351873 36351980 -53152573 + MIR SINE MIR 137 259 -3 216 0 0 0 chr17 36352874 36352898 -53151655 + (TG)n Simple_repeat Simple_repeat 1 24 0 255 302 104 11 chr17 36352906 36352930 -53151623 + HAL1 LINE L1 1154 1174 -1333 240 35 0 0 chr17 36352930 36352959 -53151594 + (TG)n Simple_repeat Simple_repeat 2 30 0 255 302 104 11 chr17 36352959 36353116 -53151437 + HAL1 LINE L1 1174 1352 -1155 595 275 12 83 chr17 36353117 36353368 -53151185 + L1ME3 LINE L1 4917 5141 -1005 2071 114 29 0 chr17 36353368 36353666 -53150887 - AluSx SINE Alu 0 306 1 595 275 12 83 chr17 36353666 36353751 -53150802 + L1ME3 LINE L1 5141 5230 -916 358 226 36 0 chr17 36353788 36353872 -53150681 + L1ME3 LINE L1 5975 6061 -101 297 0 0 0 chr17 36353932 36353965 -53150588 + (CA)n Simple_repeat Simple_repeat 2 34 0 2703 226 38 38 chr17 36353974 36354467 -53150086 + L1ME3 LINE L1 5236 5731 -431 1597 182 0 7 chr17 36354467 36354753 -53149800 + L1PB4 LINE L1 5855 6138 -18 2703 226 38 38 chr17 36354753 36355084 -53149469 + L1ME3 LINE L1 5731 6061 -101 730 255 189 19 chr17 36355167 36355532 -53149021 + HAL1 LINE L1 1338 1764 -743 361 253 117 57 chr17 36355551 36355851 -53148702 + HAL1 LINE L1 1835 2152 -355 258 233 8 90 chr17 36355892 36356025 -53148528 + HAL1b LINE L1 747 868 -480 645 235 132 4 chr17 36356093 36356377 -53148176 + HAL1b LINE L1 797 2506 -1 380 320 16 8 chr17 36356961 36357083 -53147470 + MIR3 SINE MIR 38 160 -48 257 262 8 12 chr17 36357882 36358020 -53146533 - MIR SINE MIR -1 261 69 1707 223 97 46 chr17 36358020 36358577 -53145976 + MLT1E LTR MaLR 1 593 0 250 322 43 9 chr17 36358827 36358942 -53145611 + MIR3 SINE MIR 65 183 -25 210 158 0 0 chr17 36359469 36359507 -53145046 + T-rich Low_complexity Low_complexity 1 38 0 974 253 37 4 chr17 36359626 36359871 -53144682 + MIR SINE MIR 9 261 -1 250 279 0 15 chr17 36360066 36360134 -53144419 + GA-rich Low_complexity Low_complexity 1 67 0 377 314 44 7 chr17 36360279 36360416 -53144137 - MIR SINE MIR -110 152 11 278 278 67 0 chr17 36360447 36360537 -53144016 + MIR3 SINE MIR 86 181 -27 272 337 59 0 chr17 36360887 36360988 -53143565 + MIR SINE MIR 39 145 -63 3673 116 11 15 chr17 36361143 36361671 -53142882 - MER1A DNA MER1_type -1 526 1 204 239 82 141 chr17 36362135 36362319 -53142234 - L2 LINE L2 -73 3199 3027 218 292 0 22 chr17 36362571 36362660 -53141893 - MIR3 SINE MIR -119 89 3 932 258 182 31 chr17 36363213 36363636 -53140917 + LTR16C LTR ERVL 5 491 0 326 299 52 82 chr17 36363636 36363830 -53140723 + MIR SINE MIR 10 197 -65 237 248 221 9 chr17 36364563 36364676 -53139877 + MIR3 SINE MIR 13 149 -59 550 278 65 29 chr17 36364862 36365337 -53139216 - LTR33 LTR ERVL 0 521 4 303 410 7 0 chr17 36365350 36365494 -53139059 - L3 LINE CR1 -104 1473 1329 501 274 95 17 chr17 36366091 36366270 -53138283 - L3 LINE CR1 -1 1576 1384 212 259 0 102 chr17 36367404 36367601 -53136952 + CT-rich Low_complexity Low_complexity 2 178 0 611 261 131 7 chr17 36367732 36368023 -53136530 - L1ME4a LINE L1 -11 6110 5784 189 0 0 0 chr17 36370133 36370154 -53134399 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 413 240 22 34 chr17 36371258 36371411 -53133142 - MLT1I LTR MaLR -206 203 58 541 263 16 54 chr17 36371535 36371721 -53132832 - MIR3 SINE MIR 0 208 30 515 206 361 6 chr17 36372179 36372359 -53132194 - MIR SINE MIR -14 248 5 1397 191 140 8 chr17 36372400 36372793 -53131760 + Charlie4a DNA MER1_type 30 474 -34 676 282 61 14 chr17 36373701 36373914 -53130639 - MIR SINE MIR -23 239 17 316 198 99 0 chr17 36374279 36374360 -53130193 + L2 LINE L2 3150 3238 -34 198 0 0 0 chr17 36374425 36374447 -53130106 + (TTG)n Simple_repeat Simple_repeat 3 24 0 414 337 62 0 chr17 36375666 36375844 -53128709 - MIR SINE MIR -6 256 68 1081 249 43 7 chr17 36375848 36376149 -53128404 + MLT1J LTR MaLR 90 401 -110 1660 249 90 49 chr17 36376192 36376883 -53127670 - MER72 LTR ERV1 0 722 4 490 295 119 21 chr17 36377098 36377291 -53127262 + MIR SINE MIR 51 262 0 344 291 101 76 chr17 36377300 36377458 -53127095 + MIR3 SINE MIR 31 192 -16 237 216 0 108 chr17 36377460 36377534 -53127019 - MIR3 SINE MIR -49 159 94 649 277 66 8 chr17 36377675 36377917 -53126636 + MLT1J1 LTR MaLR 191 446 0 185 289 67 22 chr17 36378374 36378464 -53126089 + MIR3 SINE MIR 9 102 -106 * 212 265 59 15 chr17 36378461 36378529 -53126024 - MIR SINE MIR -111 97 27 183 100 0 0 chr17 36379124 36379154 -53125399 + (ATG)n Simple_repeat Simple_repeat 2 31 0 242 233 17 0 chr17 36379155 36379215 -53125338 - MIR SINE MIR -63 145 85 412 273 106 92 chr17 36379230 36379644 -53124909 - L2 LINE L2 0 3272 2853 2254 182 117 2 chr17 36380012 36380500 -53124053 + MER74A LTR ERVL 15 558 0 2253 166 112 51 chr17 36380506 36381017 -53123536 - MLT1F LTR MaLR 0 542 1 592 243 77 18 chr17 36381654 36381823 -53122730 - MIR3 SINE MIR -15 193 15 226 224 0 20 chr17 36382763 36382812 -53121741 + L2 LINE L2 3141 3188 -84 191 296 170 52 chr17 36382912 36383047 -53121506 - MIR SINE MIR -103 159 9 569 217 22 51 chr17 36383395 36383533 -53121020 + MIR3 SINE MIR 41 174 -34 2401 71 3 3 chr17 36383978 36384273 -53120280 - AluY SINE Alu -16 295 1 352 282 94 8 chr17 36384275 36384392 -53120161 - MIR SINE MIR -114 148 22 461 247 233 7 chr17 36384492 36384642 -53119911 + MER5A DNA MER1_type 1 184 -5 215 305 136 25 chr17 36384950 36385068 -53119485 - MIR3 SINE MIR -31 177 47 554 264 145 15 chr17 36385071 36385340 -53119213 - MLT1L LTR MaLR -4 611 308 255 311 83 23 chr17 36386371 36386503 -53118050 + L2 LINE L2 2718 2857 -457 1212 153 5 0 chr17 36387410 36387613 -53116940 - L1PB1 LINE L1 -1 6150 5947 212 185 19 0 chr17 36388154 36388208 -53116345 + (TG)n Simple_repeat Simple_repeat 2 56 0 342 123 0 0 chr17 36388710 36388767 -53115786 + (GA)n Simple_repeat Simple_repeat 1 57 0 2323 113 0 0 chr17 36389277 36389578 -53114975 + AluSx SINE Alu 1 301 -11 413 263 92 13 chr17 36389657 36389809 -53114744 + MLT1L LTR MaLR 19 182 -433 244 188 0 0 chr17 36389892 36389940 -53114613 + MLT1L LTR MaLR 327 374 -241 394 248 48 0 chr17 36390012 36390117 -53114436 + MLT1L LTR MaLR 481 590 -25 423 320 28 28 chr17 36390274 36390363 -53114190 + MIR SINE MIR 20 108 -154 762 226 55 115 chr17 36390363 36390598 -53113955 - MER58A DNA MER1_type 0 224 4 423 320 28 28 chr17 36390598 36390686 -53113867 + MIR SINE MIR 107 197 -65 2584 68 0 3 chr17 36390701 36391012 -53113541 + AluY SINE Alu 1 310 -1 636 204 59 26 chr17 36391113 36391265 -53113288 + MIR SINE MIR 63 219 -43 207 114 0 0 chr17 36391280 36391315 -53113238 + (TAA)n Simple_repeat Simple_repeat 2 36 0 181 265 284 0 chr17 36391861 36391963 -53112590 + MIR3 SINE MIR 74 204 -4 625 277 71 19 chr17 36392383 36392650 -53111903 - HAL1 LINE L1 -520 1987 1707 1049 218 123 73 chr17 36392672 36393305 -53111248 - HAL1 LINE L1 -991 1516 852 1030 252 44 42 chr17 36393557 36393620 -53110933 - HAL1 LINE L1 -2109 398 337 817 140 0 22 chr17 36393620 36393756 -53110797 - FLAM_A SINE Alu 0 133 1 1030 252 44 42 chr17 36393756 36394053 -53110500 - HAL1 LINE L1 -2170 337 37 309 322 8 8 chr17 36394566 36394684 -53109869 + (TATATG)n Simple_repeat Simple_repeat 4 121 0 1798 161 42 44 chr17 36394784 36395060 -53109493 - MLT1A1 LTR MaLR -2 363 87 2204 122 0 10 chr17 36395060 36395364 -53109189 - AluSg SINE Alu -9 301 1 1798 161 42 44 chr17 36395364 36395448 -53109105 - MLT1A1 LTR MaLR -278 87 4 190 309 0 0 chr17 36395462 36395517 -53109036 + MIR SINE MIR 92 146 -62 315 226 12 48 chr17 36396045 36396129 -53108424 - L2 LINE L2 0 3313 3233 834 263 21 8 chr17 36396672 36396912 -53107641 + MIR SINE MIR 17 259 -3 309 310 101 0 chr17 36397820 36397949 -53106604 - L2 LINE L2 -9 3263 3122 505 274 4 0 chr17 36397985 36398127 -53106426 + MIR SINE MIR 21 167 -41 1454 251 91 19 chr17 36398135 36398609 -53105944 - MLT1G LTR MaLR -13 577 70 187 280 70 70 chr17 36398629 36398729 -53105824 + MIR SINE MIR 159 258 -4 417 338 111 26 chr17 36398823 36399275 -53105278 - L2 LINE L2 -218 3054 2564 210 290 0 14 chr17 36399783 36399852 -53104701 + MIR SINE MIR 23 90 -172 307 320 20 0 chr17 36399975 36400075 -53104478 - MIR SINE MIR -72 136 35 348 198 44 22 chr17 36400331 36400422 -53104131 + MIR SINE MIR 45 137 -71 209 300 146 31 chr17 36400520 36400650 -53103903 + MIR SINE MIR 3 147 -115 804 259 65 34 chr17 36400810 36401062 -53103491 + MLT1J2 LTR MaLR 1 278 -131 1186 147 59 0 chr17 36401062 36401266 -53103287 + MER20 DNA MER1_type 1 216 -3 804 259 65 34 chr17 36401266 36401403 -53103150 + MLT1J2 LTR MaLR 278 409 0 208 306 216 0 chr17 36401406 36401517 -53103036 - MIR SINE MIR -105 157 23 192 302 0 0 chr17 36402780 36402833 -53101720 + L2 LINE L2 3208 3260 -12 294 269 109 8 chr17 36403238 36403357 -53101196 - MIR3 SINE MIR -65 143 13 320 198 0 8 chr17 36403689 36403815 -53100738 + GA-rich Low_complexity Low_complexity 2 126 0 285 259 60 12 chr17 36403847 36404013 -53100540 + (CAGAGA)n Simple_repeat Simple_repeat 6 179 0 2413 90 3 0 chr17 36404094 36404393 -53100160 + AluSx SINE Alu 1 300 -12 212 344 37 55 chr17 36404528 36404691 -53099862 - MIR SINE MIR -69 193 34 2020 144 10 0 chr17 36405019 36405310 -53099243 - AluJb SINE Alu -18 294 1 220 171 0 0 chr17 36405381 36405416 -53099137 + polypyrimidine Low_complexity Low_complexity 3 37 0 954 283 85 10 chr17 36405422 36406026 -53098527 - L2 LINE L2 -19 3294 2636 267 328 116 20 chr17 36406231 36406429 -53098124 - MIR SINE MIR -6 256 40 486 311 85 64 chr17 36406513 36406644 -53097909 + L2 LINE L2 2512 2639 -633 1668 171 7 39 chr17 36406644 36406954 -53097599 - AluJo SINE Alu -7 305 6 486 311 85 64 chr17 36406954 36407354 -53097199 + L2 LINE L2 2639 3053 -219 315 287 131 0 chr17 36409214 36409336 -53095217 + MIR3 SINE MIR 20 157 -51 329 293 16 64 chr17 36409344 36409461 -53095092 + MER5A DNA MER1_type 2 125 -64 2399 82 0 3 chr17 36409461 36409753 -53094800 - AluY SINE Alu -20 291 1 329 293 16 64 chr17 36409753 36409808 -53094745 + MER5A DNA MER1_type 125 181 -8 588 279 148 30 chr17 36409922 36410287 -53094266 + L3 LINE CR1 1169 1576 -1 1197 176 0 10 chr17 36411403 36411636 -53092917 + AluJb SINE Alu 109 339 0 446 332 142 22 chr17 36411749 36412116 -53092437 - L3 LINE CR1 -1 1576 1166 928 242 90 30 chr17 36412127 36412517 -53092036 - MLT1J2 LTR MaLR 0 409 9 249 299 19 56 chr17 36412523 36412630 -53091923 - L3 LINE CR1 -425 1152 1050 657 274 0 0 chr17 36412678 36412835 -53091718 - MER63A DNA MER1_type -1 209 53 217 294 44 15 chr17 36412901 36412969 -53091584 - MIR SINE MIR -80 182 113 240 254 123 26 chr17 36413113 36413227 -53091326 + L2 LINE L2 3180 3304 -9 244 298 0 0 chr17 36414331 36414388 -53090165 + polypyrimidine Low_complexity Low_complexity 1 57 0 411 295 54 0 chr17 36414560 36414672 -53089881 + L2 LINE L2 3155 3272 0 1972 158 48 33 chr17 36414841 36415061 -53089492 - MSTA LTR MaLR 0 428 213 2488 76 0 13 chr17 36415061 36415365 -53089188 + AluY SINE Alu 1 300 -11 2279 113 0 10 chr17 36415373 36415674 -53088879 - AluSq SINE Alu -15 298 1 1972 158 48 33 chr17 36415674 36415863 -53088690 - MSTA LTR MaLR -221 207 4 235 261 207 9 chr17 36416183 36416294 -53088259 - MIR3 SINE MIR -67 141 9 237 65 0 0 chr17 36416499 36416530 -53088023 + (TG)n Simple_repeat Simple_repeat 1 31 0 239 309 163 0 chr17 36417032 36417155 -53087398 + MIR3 SINE MIR 66 208 0 955 240 36 12 chr17 36417332 36417582 -53086971 + MIR SINE MIR 7 262 0 427 296 48 39 chr17 36418486 36418716 -53085837 + L2 LINE L2 2422 2653 -661 1105 263 215 14 chr17 36418723 36419142 -53085411 - MLT1J LTR MaLR 0 511 9 271 325 6 57 chr17 36419172 36419329 -53085224 + L2 LINE L2 2717 2865 -449 875 291 31 14 chr17 36419577 36419866 -53084687 + LTR16C LTR ERVL 198 491 0 959 344 37 53 chr17 36420056 36420413 -53084140 + MERVL LTR ERVL 429 774 -4222 2325 93 0 14 chr17 36420413 36420732 -53083821 + AluSq SINE Alu 1 315 0 959 344 37 53 chr17 36420732 36420990 -53083563 + MERVL LTR ERVL 774 1035 -3961 1865 331 69 33 chr17 36421086 36422161 -53082392 + MERVL LTR ERVL 1311 2424 -3340 1169 353 62 30 chr17 36422174 36423049 -53081504 + MERVL LTR ERVL 4378 5280 -205 842 256 99 52 chr17 36423351 36423733 -53080820 + LTR16C LTR ERVL 92 491 0 234 333 0 0 chr17 36423835 36423916 -53080637 + L2 LINE L2 3188 3268 -4 268 350 104 6 chr17 36424769 36424932 -53079621 - MIR SINE MIR -11 251 73 307 354 126 20 chr17 36425809 36426247 -53078306 - L2 LINE L2 -19 3294 2811 617 267 26 119 chr17 36426701 36426977 -53077576 - MER102a DNA MER1_type -1098 319 81 1634 187 29 4 chr17 36426977 36427255 -53077298 + AluJb SINE Alu 13 297 -15 617 267 26 119 chr17 36427255 36427330 -53077223 - MER102a DNA MER1_type -1336 81 1 204 222 48 32 chr17 36427335 36427398 -53077155 - MIR SINE MIR -111 151 88 197 244 0 0 chr17 36428485 36428526 -53076027 + MIR SINE MIR 104 144 -64 550 242 170 0 chr17 36428586 36428739 -53075814 + MER5A DNA MER1_type 4 182 -7 323 333 54 6 chr17 36429352 36429520 -53075033 - L3 LINE CR1 -19 1558 1383 216 294 90 111 chr17 36429563 36429842 -53074711 - L2 LINE L2 -8 3264 2992 257 257 46 66 chr17 36430088 36430240 -53074313 + L2 LINE L2 2871 3019 -253 2375 109 0 0 chr17 36431205 36431509 -53073044 + AluSc SINE Alu 1 304 -5 1979 153 3 10 chr17 36431577 36431891 -53072662 - AluJb SINE Alu 0 312 1 1057 250 8 32 chr17 36432990 36433242 -53071311 + MIR SINE MIR 17 262 0 1450 195 0 26 chr17 36433260 36433532 -53071021 - AluJo SINE Alu -36 276 12 362 220 69 75 chr17 36433645 36433823 -53070730 + MER20B DNA MER1_type 37 217 -2 248 130 22 0 chr17 36433952 36433998 -53070555 + CT-rich Low_complexity Low_complexity 4 50 0 219 355 91 9 chr17 36434000 36434110 -53070443 - L2 LINE L2 -31 3241 3123 407 210 193 0 chr17 36435225 36435344 -53069209 + MIR SINE MIR 52 193 -69 591 330 48 23 chr17 36436326 36436677 -53067876 - L1ME4a LINE L1 -233 5888 5529 511 231 8 8 chr17 36436733 36436854 -53067699 + MIR3 SINE MIR 67 187 -21 557 291 38 26 chr17 36437175 36437387 -53067166 + MIR SINE MIR 34 246 -16 787 250 41 0 chr17 36438576 36438772 -53065781 + MER58A DNA MER1_type 1 204 -20 271 327 0 59 chr17 36439716 36439869 -53064684 + L2 LINE L2 2709 2852 -462 291 259 37 0 chr17 36440450 36440531 -53064022 + MER20B DNA MER1_type 56 139 -644 2541 74 0 3 chr17 36440651 36440961 -53063592 - AluY SINE Alu 0 311 3 1360 223 87 14 chr17 36440970 36441405 -53063148 + MER20B DNA MER1_type 287 753 -30 319 248 19 9 chr17 36443103 36443208 -53061345 - MER53 DNA DNA -83 106 1 189 268 0 0 chr17 36443548 36443589 -53060964 - MIR3 SINE MIR -49 159 119 302 347 20 20 chr17 36443848 36443998 -53060555 + L2 LINE L2 2703 2852 -462 240 189 113 0 chr17 36444362 36444415 -53060138 + L2 LINE L2 3234 3292 -21 426 39 0 0 chr17 36444423 36444475 -53060078 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 491 273 0 0 chr17 36444479 36444589 -53059964 + MIR SINE MIR 30 139 -69 240 261 117 127 chr17 36445266 36445692 -53058861 + L2 LINE L2 2822 3243 -29 985 210 34 59 chr17 36445741 36445823 -53058730 + MER33 DNA MER1_type 9 91 -2494 1915 146 0 0 chr17 36445823 36446098 -53058455 - AluJb SINE Alu -29 283 9 985 210 34 59 chr17 36446098 36446339 -53058214 + MER33 DNA MER1_type 91 324 0 693 261 148 5 chr17 36446339 36446542 -53058011 + MIR SINE MIR 31 262 0 328 213 0 0 chr17 36446649 36446710 -53057843 - L2 LINE L2 -3 3310 3250 237 271 29 0 chr17 36446738 36446808 -53057745 - L2 LINE L2 0 3313 3242 656 239 74 32 chr17 36448087 36448282 -53056271 + MIR SINE MIR 3 211 -51 186 200 156 0 chr17 36448913 36448958 -53055595 + L2 LINE L2 3139 3190 -82 735 306 17 44 chr17 36449974 36450268 -53054285 - L3 LINE CR1 -76 1501 1216 262 235 374 18 chr17 36450321 36450487 -53054066 + MIR SINE MIR 28 252 -10 497 263 159 29 chr17 36451279 36451765 -53052788 + MLT1H LTR MaLR 21 555 0 * 799 247 62 54 chr17 36451765 36452116 -53052437 - LTR16C LTR ERVL -30 461 108 3119 215 44 8 chr17 36452295 36453040 -53051513 + MER20B DNA MER1_type 7 778 -5 211 231 58 0 chr17 36453166 36453218 -53051335 - L2 LINE L2 -219 3053 2999 316 244 11 78 chr17 36453319 36453409 -53051144 - MIR SINE MIR -119 143 60 599 289 146 19 chr17 36453475 36453581 -53050972 - L2 LINE L2 -7 3306 3215 1152 160 68 5 chr17 36453581 36453787 -53050766 - MER20B DNA MER1_type 0 219 1 599 289 146 19 chr17 36453787 36453988 -53050565 - L2 LINE L2 -98 3215 2960 930 162 0 0 chr17 36453993 36454172 -53050381 + (CAT)n Simple_repeat Simple_repeat 1 179 0 526 222 79 0 chr17 36454195 36454321 -53050232 - MIR SINE MIR -15 247 112 295 259 175 42 chr17 36454317 36454406 -53050147 - L2 LINE L2 -356 2958 2882 * 2109 120 3 0 chr17 36454406 36454719 -53049834 + AluSq SINE Alu 1 314 0 295 259 175 42 chr17 36454719 36454771 -53049782 - L2 LINE L2 -432 2882 2797 1063 243 58 37 chr17 36454817 36455142 -53049411 + LTR16A LTR ERVL 81 412 -38 1679 290 145 14 chr17 36455183 36456015 -53048538 - L2 LINE L2 -534 2780 1840 413 309 56 6 chr17 36456704 36456866 -53047687 - MIR SINE MIR -61 201 32 234 271 29 14 chr17 36456876 36456946 -53047607 + MIR3 SINE MIR 116 186 -22 185 204 48 117 chr17 36457758 36457861 -53046692 - L2 LINE L2 -155 3117 3022 249 264 44 55 chr17 36458067 36458158 -53046395 - MIR3 SINE MIR 0 208 119 311 208 22 49 chr17 36458428 36458539 -53046014 - MIR SINE MIR -62 146 76 183 349 0 0 chr17 36458855 36458918 -53045635 - MIR SINE MIR -90 172 110 523 294 128 9 chr17 36458956 36459174 -53045379 + MIR SINE MIR 18 261 -1 256 286 152 0 chr17 36459371 36459483 -53045070 + MIR SINE MIR 81 209 -53 223 317 12 0 chr17 36460112 36460194 -53044359 + (TTCA)n Simple_repeat Simple_repeat 2 84 0 268 378 84 19 chr17 36460490 36460752 -53043801 + L2 LINE L2 2600 2878 -436 252 351 80 53 chr17 36460812 36461114 -53043439 + L2 LINE L2 2931 3240 -32 406 244 149 21 chr17 36461220 36461423 -53043130 + MIR SINE MIR 33 262 0 322 315 54 34 chr17 36461427 36461576 -53042977 + MIR SINE MIR 52 203 -59 192 318 63 0 chr17 36462054 36462117 -53042436 - L2 LINE L2 -35 3237 3171 473 261 48 53 chr17 36462372 36462560 -53041993 - MIR SINE MIR -56 206 20 313 312 76 13 chr17 36463120 36463277 -53041276 + MIR3 SINE MIR 34 200 -8 185 264 154 45 chr17 36463468 36463578 -53040975 + MIR SINE MIR 32 153 -109 215 310 0 23 chr17 36464349 36464436 -53040117 + G-rich Low_complexity Low_complexity 5 89 0 1628 184 74 0 chr17 36464753 36465036 -53039517 - AluJb SINE Alu -8 304 1 614 299 51 0 chr17 36465330 36465544 -53039009 + MIR SINE MIR 31 255 -7 212 296 0 0 chr17 36465552 36465596 -53038957 + C-rich Low_complexity Low_complexity 3 46 0 273 158 53 18 chr17 36466200 36466257 -53038296 - MIR3 SINE MIR -53 155 97 453 223 32 45 chr17 36466399 36466556 -53037997 + L1ME3A LINE L1 6016 6170 0 182 318 34 23 chr17 36467061 36467149 -53037404 - MIR SINE MIR -87 121 33 182 286 14 43 chr17 36467640 36467710 -53036843 - L2 LINE L2 -4 3309 3242 2214 129 7 0 chr17 36468209 36468511 -53036042 + AluSg SINE Alu 1 304 -6 537 272 171 42 chr17 36468702 36468989 -53035564 + L2 LINE L2 2990 3313 0 201 74 0 0 chr17 36469151 36469178 -53035375 + (CA)n Simple_repeat Simple_repeat 1 27 0 438 231 74 8 chr17 36469240 36469361 -53035192 + MIR SINE MIR 134 262 0 272 171 46 0 chr17 36469363 36469413 -53035140 - MIR SINE MIR -85 123 71 522 299 58 33 chr17 36470099 36470312 -53034241 + MIR SINE MIR 35 256 -6 700 335 10 0 chr17 36470891 36471085 -53033468 + MER91A DNA MER1_type 1 196 0 224 324 99 9 chr17 36471239 36471350 -53033203 + L2 LINE L2 3152 3272 0 239 270 0 72 chr17 36471361 36471472 -53033081 + GA-rich Low_complexity Low_complexity 5 107 0 1819 171 19 45 chr17 36471640 36471785 -53032768 + MLT1A1 LTR MaLR 1 148 -217 1727 165 157 9 chr17 36471785 36472130 -53032423 + MSTD LTR MaLR 1 396 0 1819 171 19 45 chr17 36472130 36472359 -53032194 + MLT1A1 LTR MaLR 148 365 0 692 217 94 42 chr17 36472743 36472955 -53031598 + MIR SINE MIR 13 235 -27 293 363 22 37 chr17 36473197 36473467 -53031086 + L1MD2 LINE L1 21 286 -6254 10447 226 59 26 chr17 36473978 36476254 -53028299 + L1MD2 LINE L1 916 3116 -3444 1819 159 21 10 chr17 36476254 36476544 -53028009 - AluJo SINE Alu -18 294 2 10447 226 59 26 chr17 36476544 36477089 -53027464 + L1MD2 LINE L1 3116 3642 -2918 1670 199 48 11 chr17 36477089 36477441 -53027112 + MLT1A1 LTR MaLR 1 365 0 10447 226 59 26 chr17 36477441 36478733 -53025820 + L1MD2 LINE L1 3642 4890 -1670 4800 23 2 9 chr17 36478733 36479302 -53025251 + L1PA4 LINE L1 5591 6155 0 10447 226 59 26 chr17 36479302 36479748 -53024805 + L1MD2 LINE L1 4890 5320 -1240 1968 155 6 25 chr17 36479748 36480065 -53024488 - AluSx SINE Alu -1 311 1 10447 226 59 26 chr17 36480065 36480317 -53024236 + L1MD2 LINE L1 5320 5829 -731 1151 159 0 0 chr17 36480319 36480489 -53024064 + FRAM SINE Alu 1 169 -7 2659 203 92 6 chr17 36480503 36481147 -53023406 + L1MD2 LINE L1 5834 6532 -221 2294 68 36 0 chr17 36481541 36481821 -53022732 - AluSg SINE Alu -14 296 7 319 248 70 57 chr17 36482242 36482399 -53022154 + L2 LINE L2 2949 3107 -165 199 231 215 0 chr17 36482491 36482556 -53021997 + L2 LINE L2 3192 3270 -2 287 311 92 0 chr17 36482756 36482875 -53021678 + MIR SINE MIR 16 145 -63 766 300 58 0 chr17 36483703 36483926 -53020627 + MIR SINE MIR 27 262 0 459 313 44 40 chr17 36484001 36484228 -53020325 + MIR SINE MIR 6 233 -29 792 281 70 42 chr17 36484402 36484761 -53019792 + MLT1H LTR MaLR 1 369 -180 1020 304 48 24 chr17 36484887 36485259 -53019294 - MLT1K LTR MaLR -206 382 2 681 82 20 0 chr17 36485934 36486032 -53018521 + MSTC LTR MaLR 1 100 -328 3306 74 21 0 chr17 36486032 36486467 -53018086 + L1PA10 LINE L1 5721 6164 -4 2001 140 14 29 chr17 36486612 36486961 -53017592 + MSTC LTR MaLR 85 428 0 775 192 33 22 chr17 36487421 36487603 -53016950 + MLT1B LTR MaLR 4 187 -187 519 128 10 87 chr17 36487616 36487811 -53016742 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 238 143 20 20 chr17 36487815 36487864 -53016689 + CT-rich Low_complexity Low_complexity 1 49 0 941 196 11 0 chr17 36487878 36488062 -53016491 + MLT1B LTR MaLR 205 390 0 214 316 74 11 chr17 36488091 36488186 -53016367 - MIR SINE MIR -43 219 119 309 297 59 10 chr17 36488363 36488464 -53016089 - MIR SINE MIR -69 193 88 1992 184 39 11 chr17 36488470 36488829 -53015724 + LTR32 LTR ERVL 14 382 -89 2456 84 0 0 chr17 36488836 36489145 -53015408 + AluY SINE Alu 1 309 -2 195 69 0 0 chr17 36489149 36489178 -53015375 + (CAAAAA)n Simple_repeat Simple_repeat 4 32 0 563 129 0 0 chr17 36489181 36489266 -53015287 + LTR32 LTR ERVL 382 466 -5 188 244 0 0 chr17 36489441 36489482 -53015071 + L2 LINE L2 3268 3308 -5 529 256 264 34 chr17 36489747 36490106 -53014447 + L2 LINE L2 2839 3294 -19 2193 119 3 0 chr17 36490106 36490399 -53014154 - AluSx SINE Alu -18 294 1 529 256 264 34 chr17 36490399 36490425 -53014128 + L2 LINE L2 3294 3313 0 203 133 0 0 chr17 36490719 36490749 -53013804 + (GGCTG)n Simple_repeat Simple_repeat 5 34 0 2132 119 0 0 chr17 36491237 36491515 -53013038 + AluSq SINE Alu 17 294 -19 467 210 25 76 chr17 36492343 36492500 -53012053 - LTR67 LTR ERVL -398 159 11 243 336 91 28 chr17 36492530 36492783 -53011770 + L2 LINE L2 2301 2569 -745 336 202 58 29 chr17 36492960 36493064 -53011489 - MLT1J LTR MaLR -9 502 396 433 216 168 0 chr17 36493259 36493384 -53011169 - MLT1J LTR MaLR -364 147 2 440 347 34 11 chr17 36493456 36493632 -53010921 - MIR SINE MIR -70 192 13 372 250 117 23 chr17 36493619 36493747 -53010806 + L2 LINE L2 3174 3313 0 * 672 163 0 0 chr17 36493892 36494021 -53010532 + (TG)n Simple_repeat Simple_repeat 1 129 0 1604 161 0 39 chr17 36494126 36494436 -53010117 - AluJo SINE Alu -14 298 1 900 220 48 0 chr17 36494531 36494737 -53009816 - MIR SINE MIR -3 259 45 270 220 0 17 chr17 36494849 36494908 -53009645 - MIR SINE MIR -63 145 88 1999 136 0 0 chr17 36495792 36496117 -53008436 + AluSx SINE Alu 1 312 0 449 270 106 61 chr17 36496195 36496562 -53007991 - MLT1H LTR MaLR -22 387 57 551 198 217 32 chr17 36496642 36496799 -53007754 + MER5A DNA MER1_type 4 189 0 384 335 47 75 chr17 36496877 36497199 -53007354 + L2 LINE L2 2944 3256 -16 216 0 0 0 chr17 36497833 36497857 -53006696 + (A)n Simple_repeat Simple_repeat 1 24 0 205 250 0 0 chr17 36499629 36499669 -53004884 - MIR SINE MIR -138 70 31 295 241 0 46 chr17 36500673 36500760 -53003793 + MIR3 SINE MIR 91 173 -35 293 243 303 6 chr17 36501030 36501177 -53003376 + MIR SINE MIR 3 190 -72 686 299 17 37 chr17 36501663 36501915 -53002638 + MIR SINE MIR 6 252 -10 312 272 49 12 chr17 36501963 36502044 -53002509 - L2 LINE L2 -47 3225 3142 241 234 121 32 chr17 36502574 36502698 -53001855 + MIR3 SINE MIR 20 154 -54 228 328 22 44 chr17 36502915 36503098 -53001455 - MARNA DNA Mariner -12 574 396 529 293 102 45 chr17 36503301 36503818 -53000735 + L2 LINE L2 2717 3268 -4 374 220 108 128 chr17 36503868 36504118 -53000435 - MIR SINE MIR -2 260 16 196 268 37 24 chr17 36504167 36504249 -53000304 - MIR3 SINE MIR -29 179 97 213 245 0 0 chr17 36504987 36505036 -52999517 + (TA)n Simple_repeat Simple_repeat 2 50 0 827 77 29 164 chr17 36505101 36505308 -52999245 - L1MA7 LINE L1 -2 6289 6111 286 257 224 26 chr17 36505538 36505690 -52998863 - MIR SINE MIR -33 229 48 269 346 10 20 chr17 36506582 36506683 -52997870 + MER81 DNA DNA 13 112 -2 406 154 33 0 chr17 36506971 36507062 -52997491 + CT-rich Low_complexity Low_complexity 1 94 0 * 711 366 12 0 chr17 36507051 36507215 -52997338 + C-rich Low_complexity Low_complexity 3 168 0 360 0 0 0 chr17 36507215 36507255 -52997298 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1971 112 27 3 chr17 36507255 36507549 -52997004 - AluSx SINE Alu -11 301 1 341 264 27 64 chr17 36507898 36508008 -52996545 + MIR3 SINE MIR 82 187 -21 * 440 224 84 28 chr17 36507979 36508122 -52996431 + MER5A DNA MER1_type 17 167 -22 517 131 81 20 chr17 36508290 36508389 -52996164 + MIR SINE MIR 85 189 -73 292 250 140 0 chr17 36509296 36509396 -52995157 + MIR SINE MIR 34 147 -115 192 385 22 11 chr17 36509900 36509991 -52994562 - MIR SINE MIR -87 121 30 222 267 0 17 chr17 36510010 36510070 -52994483 + (TAA)n Simple_repeat Simple_repeat 3 61 0 940 268 63 0 chr17 36510070 36510309 -52994244 - MIR SINE MIR 0 262 9 302 341 53 8 chr17 36510839 36510983 -52993570 - MIR3 SINE MIR -62 146 11 201 233 23 0 chr17 36511632 36511675 -52992878 + G-rich Low_complexity Low_complexity 4 47 0 1685 163 3 0 chr17 36511765 36512048 -52992505 - AluJb SINE Alu -28 284 1 604 242 110 48 chr17 36513254 36513481 -52991072 + MIR SINE MIR 2 242 -20 345 305 9 9 chr17 36513556 36513661 -52990892 + MIR SINE MIR 17 121 -87 559 244 122 6 chr17 36514406 36514562 -52989991 - MIR SINE MIR -21 241 68 588 244 88 31 chr17 36515336 36515529 -52989024 - MIR SINE MIR -52 210 7 420 283 0 0 chr17 36515595 36515687 -52988866 + MIR3 SINE MIR 108 199 -9 6350 78 24 3 chr17 36515701 36516551 -52988002 + L1PA11 LINE L1 5307 6173 -1 470 79 13 0 chr17 36517529 36517605 -52986948 + (TG)n Simple_repeat Simple_repeat 1 77 0 401 265 17 26 chr17 36517820 36517937 -52986616 + MIR3 SINE MIR 79 194 -14 400 148 10 50 chr17 36518118 36518219 -52986334 - L1MA8 LINE L1 0 6291 6195 1573 204 10 20 chr17 36518599 36518893 -52985660 - AluJb SINE Alu -11 291 1 462 318 73 34 chr17 36519090 36519176 -52985377 - MIR SINE MIR -8 254 173 1168 208 29 123 chr17 36519176 36519589 -52984964 - MLT1A2 LTR MaLR 0 374 1 462 318 73 34 chr17 36519589 36519681 -52984872 - MIR SINE MIR -89 173 69 278 284 31 71 chr17 36521516 36521643 -52982910 - L2 LINE L2 -8 3264 3143 339 244 119 9 chr17 36522672 36522784 -52981769 - MIR SINE MIR -66 142 31 313 276 142 67 chr17 36522954 36523155 -52981398 - MIR SINE MIR -3 259 36 1953 198 10 57 chr17 36523155 36523644 -52980909 + MER31B LTR ERV1 1 466 0 313 276 142 67 chr17 36523644 36523681 -52980872 - MIR SINE MIR -226 36 3 401 287 81 15 chr17 36523697 36523833 -52980720 + MIR SINE MIR 28 172 -90 189 321 149 16 chr17 36523809 36523868 -52980685 - MIR SINE MIR 0 262 212 * 2127 135 0 0 chr17 36523868 36524179 -52980374 - AluSx SINE Alu -1 311 1 189 321 149 16 chr17 36524179 36524308 -52980245 - MIR SINE MIR -50 212 45 * 193 271 133 73 chr17 36524231 36524382 -52980171 + MIR3 SINE MIR 42 201 -7 192 383 32 0 chr17 36524569 36524663 -52979890 - L3b LINE CR1 -330 1253 1157 255 125 0 0 chr17 36524963 36525003 -52979550 + (A)n Simple_repeat Simple_repeat 1 40 0 431 250 19 28 chr17 36525279 36525387 -52979166 + MIR SINE MIR 2 108 -154 * 1433 274 124 31 chr17 36525309 36525922 -52978631 + L2 LINE L2 2112 2781 -533 333 0 0 0 chr17 36526055 36526092 -52978461 + (TG)n Simple_repeat Simple_repeat 2 38 0 356 223 114 60 chr17 36526296 36526462 -52978091 - MER5A DNA MER1_type -3 186 12 486 279 42 82 chr17 36527113 36527805 -52976748 - L1MEd LINE L1 -4618 1513 962 690 214 0 0 chr17 36527828 36527954 -52976599 - FLAM_C SINE Alu -17 126 1 425 289 18 0 chr17 36528075 36528189 -52976364 - L2 LINE L2 -8 3305 3190 622 318 52 9 chr17 36528191 36528424 -52976129 - L1MEd LINE L1 -5316 803 561 4678 213 42 19 chr17 36528599 36530560 -52973993 - L1MB4 LINE L1 -29 6151 4075 275 70 0 23 chr17 36531157 36531200 -52973353 + (GA)n Simple_repeat Simple_repeat 1 42 0 209 300 0 0 chr17 36531886 36531936 -52972617 - L2 LINE L2 -83 3189 3140 180 277 0 0 chr17 36531975 36532022 -52972531 - L2 LINE L2 -87 3226 3180 454 309 28 60 chr17 36532311 36532528 -52972025 - L1MC4 LINE L1 -6 8036 7827 1521 224 120 28 chr17 36532553 36532798 -52971755 - L1ME2 LINE L1 -13 6151 5930 1512 177 56 0 chr17 36532798 36533090 -52971463 - AluJb SINE Alu 0 308 2 1521 224 120 28 chr17 36533090 36533375 -52971178 - L1ME2 LINE L1 -234 5930 5569 * 4626 243 90 34 chr17 36533361 36535235 -52969318 - L1ME2 LINE L1 -795 5351 3240 2801 10 0 0 chr17 36535395 36535707 -52968846 - AluYb8 SINE Alu -6 312 1 231 276 221 21 chr17 36536156 36536301 -52968252 + L2 LINE L2 3140 3313 0 320 331 126 11 chr17 36536688 36536894 -52967659 - MIR SINE MIR 0 262 34 194 365 40 0 chr17 36537015 36537089 -52967464 + L2 LINE L2 2893 2969 -345 189 121 0 0 chr17 36537452 36537485 -52967068 + (ATG)n Simple_repeat Simple_repeat 2 34 0 1424 231 33 17 chr17 36537488 36537847 -52966706 - MLT1A1 LTR MaLR 0 365 1 755 219 107 16 chr17 36537864 36538056 -52966497 - MIR SINE MIR -35 227 23 642 321 37 20 chr17 36538080 36538326 -52966227 - MIR SINE MIR 0 262 13 366 356 88 21 chr17 36538345 36538539 -52966014 - L3 LINE CR1 -6 1571 1365 223 357 89 0 chr17 36539102 36539214 -52965339 - MIR3 SINE MIR -21 187 66 185 222 0 0 chr17 36539221 36539257 -52965296 + L2 LINE L2 3276 3311 -2 * 572 283 114 59 chr17 36539256 36539455 -52965098 - L3 LINE CR1 -1 1576 1355 2040 140 58 0 chr17 36539455 36539784 -52964769 - MER7A DNA MER2_type 0 346 1 572 283 114 59 chr17 36539784 36539874 -52964679 - L3 LINE CR1 -222 1355 1271 2282 121 36 36 chr17 36540085 36540449 -52964104 + THE1B LTR MaLR 1 364 0 1604 189 0 10 chr17 36542594 36542900 -52961653 + AluJo SINE Alu 1 303 -9 534 230 101 40 chr17 36543135 36543283 -52961270 + MIR SINE MIR 49 205 -57 702 272 23 37 chr17 36543288 36543505 -52961048 - MER21B LTR ERV1 -77 786 573 4199 111 44 47 chr17 36543509 36544229 -52960324 - LTR8A LTR ERV1 -3 724 7 1744 221 58 103 chr17 36544245 36544830 -52959723 - MER21B LTR ERV1 -289 574 16 289 158 18 18 chr17 36544835 36544892 -52959661 + Tigger5 DNA MER2_type 23 79 -2244 883 146 0 22 chr17 36545087 36545224 -52959329 - AluJo SINE Alu -178 134 1 270 293 187 49 chr17 36545224 36545593 -52958960 - L2 LINE L2 -6 3266 2847 1920 60 4 22 chr17 36546240 36546508 -52958045 - L1PA7 LINE L1 -421 5733 5471 3310 49 5 2 chr17 36546508 36546932 -52957621 + L1PA7 LINE L1 5725 6151 -3 1019 277 55 13 chr17 36547593 36548082 -52956471 - L2 LINE L2 -38 3275 2759 660 294 77 13 chr17 36548618 36548853 -52955700 + MIR SINE MIR 12 261 -1 278 325 76 6 chr17 36549180 36549337 -52955216 + MIR3 SINE MIR 9 176 -32 204 67 0 0 chr17 36549368 36549398 -52955155 + (A)n Simple_repeat Simple_repeat 1 30 0 493 321 40 27 chr17 36551185 36551409 -52953144 + MIR SINE MIR 8 234 -28 208 395 28 18 chr17 36551476 36551585 -52952968 + L2 LINE L2 3163 3272 0 820 283 207 6 chr17 36552089 36552585 -52951968 + L2 LINE L2 2732 3313 0 782 279 66 26 chr17 36553649 36554079 -52950474 + L2 LINE L2 2755 3201 -112 458 206 47 0 chr17 36554084 36554191 -52950362 + MLT1D LTR MaLR 393 504 -1 260 339 17 9 chr17 36554971 36555086 -52949467 + MIR SINE MIR 37 152 -110 741 239 112 16 chr17 36555088 36555339 -52949214 + MER46C DNA MER2_type 1 275 -63 456 281 43 0 chr17 36555436 36555575 -52948978 - MIR SINE MIR -69 193 49 532 198 0 0 chr17 36555879 36555975 -52948578 - FRAM SINE Alu -81 95 1 227 267 17 0 chr17 36556464 36556524 -52948029 + L3 LINE CR1 715 775 -802 394 276 218 46 chr17 36556525 36556920 -52947633 + L3 LINE CR1 740 1202 -375 1745 117 84 44 chr17 36556984 36557169 -52947384 - AluJb SINE Alu -2 310 107 2327 97 0 0 chr17 36557169 36557457 -52947096 - AluSx SINE Alu -11 301 14 1745 117 84 44 chr17 36557457 36557569 -52946984 - AluJb SINE Alu -205 107 1 196 238 0 0 chr17 36557634 36557676 -52946877 + L3b LINE CR1 1345 1386 -197 1907 183 36 21 chr17 36558798 36559218 -52945335 + MSTB LTR MaLR 1 426 0 237 316 53 9 chr17 36559510 36559624 -52944929 - L3 LINE CR1 -101 1476 1358 254 262 60 54 chr17 36559740 36559889 -52944664 + MIR SINE MIR 28 177 -85 545 295 13 62 chr17 36559890 36560114 -52944439 + MIR SINE MIR 2 214 -48 759 226 24 0 chr17 36560114 36560282 -52944271 + MIR SINE MIR 90 261 -1 186 143 0 0 chr17 36560974 36561009 -52943544 + (TGGGGG)n Simple_repeat Simple_repeat 1 35 0 422 224 215 48 chr17 36561185 36561409 -52943144 - MIR SINE MIR 0 262 5 243 213 164 0 chr17 36561728 36561789 -52942764 + L2 LINE L2 3199 3269 -3 836 205 47 64 chr17 36562167 36562464 -52942089 - LTR37A LTR ERV1 -2 424 133 265 316 21 0 chr17 36562904 36562999 -52941554 + GA-rich Low_complexity Low_complexity 1 97 0 2609 25 0 0 chr17 36563094 36563408 -52941145 + L1PA2 LINE L1 5842 6155 0 296 312 70 32 chr17 36563470 36563656 -52940897 + L2 LINE L2 2890 3082 -190 341 286 30 23 chr17 36563673 36563806 -52940747 + MIR SINE MIR 1 134 -128 252 296 0 0 chr17 36564018 36564099 -52940454 + MIR SINE MIR 179 259 -3 245 303 81 0 chr17 36564160 36564259 -52940294 + L2 LINE L2 3202 3308 -5 546 206 36 134 chr17 36565747 36565994 -52938559 + L1MC4 LINE L1 7810 8032 -10 811 208 21 31 chr17 36565995 36566187 -52938366 + AluJo SINE Alu 123 312 0 2421 82 0 7 chr17 36567142 36567446 -52937107 - AluSp SINE Alu -11 302 1 747 255 118 5 chr17 36567594 36567806 -52936747 + MIR SINE MIR 27 262 0 383 299 76 0 chr17 36568152 36568296 -52936257 + MIR SINE MIR 57 211 -51 207 114 0 0 chr17 36569047 36569082 -52935471 + (CCGCG)n Simple_repeat Simple_repeat 1 35 0 583 139 106 15 chr17 36570389 36570535 -52934018 + MER33 DNA MER1_type 1 155 -88 1535 147 99 0 chr17 36570535 36570808 -52933745 + Tigger3(Golem) DNA MER2_type 6 305 -2724 1201 108 0 0 chr17 36570829 36570987 -52933566 - AluSg/x SINE Alu -22 290 133 2294 89 0 0 chr17 36570989 36571269 -52933284 - AluSq SINE Alu -12 301 22 2075 116 0 0 chr17 36571369 36571645 -52932908 + AluSx SINE Alu 32 307 -5 180 0 0 0 chr17 36571664 36571684 -52932869 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 1806 142 59 0 chr17 36571729 36572017 -52932536 - AluJb SINE Alu -2 310 6 250 286 43 0 chr17 36572120 36572190 -52932363 + MIR SINE MIR 177 249 -13 * 269 176 39 0 chr17 36572156 36572207 -52932346 + L2 LINE L2 3261 3313 0 1032 201 11 185 chr17 36572247 36572602 -52931951 - MLT1B LTR MaLR 0 390 -25 1721 188 3 31 chr17 36572602 36572921 -52931632 + AluJo SINE Alu 1 310 -2 1032 201 11 185 chr17 36572921 36572984 -52931569 - MLT1B LTR MaLR -415 4294967271 37 1443 97 65 0 chr17 36572984 36573200 -52931353 + MER30 DNA MER1_type 1 230 0 1032 201 11 185 chr17 36573200 36573233 -52931320 - MLT1B LTR MaLR -352 38 1 673 338 136 5 chr17 36573233 36573674 -52930879 - L2 LINE L2 -348 2966 2468 251 116 337 35 chr17 36573729 36573815 -52930738 + MIR SINE MIR 116 227 -35 1951 137 0 7 chr17 36573908 36574242 -52930311 - AluSx SINE Alu 0 332 1 575 327 6 0 chr17 36575181 36575346 -52929207 + MIR3 SINE MIR 14 179 -29 212 163 0 0 chr17 36575575 36575618 -52928935 + A-rich Low_complexity Low_complexity 1 43 0 980 126 34 17 chr17 36575932 36576107 -52928446 + MER96B DNA MER1_type? 2 179 -238 200 293 170 0 chr17 36576529 36576635 -52927918 - L2 LINE L2 0 3272 3149 1823 149 0 0 chr17 36577028 36577297 -52927256 - AluSx SINE Alu -4 308 40 2295 105 0 0 chr17 36577561 36577846 -52926707 - AluSg SINE Alu -25 285 1 334 213 27 40 chr17 36577847 36577922 -52926631 + L1MCa LINE L1 1995 2068 -4358 * 384 320 0 0 chr17 36577871 36577979 -52926574 - L1MC4 LINE L1 -1339 6703 6614 23 0 0 0 chr17 36578091 36578114 -52926439 + AT_rich Low_complexity Low_complexity 1 23 0 1057 155 25 0 chr17 36578669 36578830 -52925723 - AluSg/x SINE Alu -14 296 132 2393 86 10 3 chr17 36578830 36579134 -52925419 - AluSx SINE Alu -6 306 1 235 244 183 52 chr17 36579161 36579276 -52925277 + MIR3 SINE MIR 33 162 -46 1847 163 0 33 chr17 36579276 36579582 -52924971 - AluJb SINE Alu -16 296 1 504 313 7 13 chr17 36579661 36579811 -52924742 + MER117 DNA MER1_type 1 149 -48 536 286 37 6 chr17 36581833 36581994 -52922559 - MIR3 SINE MIR -40 168 3 612 165 0 0 chr17 36582032 36582135 -52922418 - AluSq/x SINE Alu -207 105 3 2091 136 19 3 chr17 36582137 36582511 -52922042 + L1MB3 LINE L1 5804 6183 0 2075 116 3 11 chr17 36582863 36583147 -52921406 - AluSx SINE Alu -30 282 1 1037 318 73 13 chr17 36583738 36583899 -52920654 - L3 LINE CR1 -3 1574 1424 2216 120 0 0 chr17 36583899 36584241 -52920312 + AluSg SINE Alu 1 342 0 1037 318 73 13 chr17 36584241 36584541 -52920012 - L3 LINE CR1 -153 1424 1084 493 323 35 25 chr17 36584784 36584982 -52919571 + MIR SINE MIR 15 214 -48 296 47 0 23 chr17 36586911 36586954 -52917599 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 186 189 0 0 chr17 36587189 36587226 -52917327 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 2278 100 0 0 chr17 36587414 36587718 -52916835 - AluSg SINE Alu 0 304 1 188 250 0 21 chr17 36587772 36587820 -52916733 + L2 LINE L2 3208 3254 -59 1007 131 0 0 chr17 36587924 36588061 -52916492 - AluJb SINE Alu -175 137 1 996 169 6 0 chr17 36588116 36588276 -52916277 + AluJb SINE Alu 149 309 -3 478 145 0 0 chr17 36588472 36588548 -52916005 + L1ME1 LINE L1 5913 5988 -178 264 223 85 11 chr17 36588551 36588645 -52915908 + L1ME1 LINE L1 6061 6161 -5 2467 91 3 0 chr17 36589417 36589726 -52914827 + AluSx SINE Alu 1 310 -2 1720 145 14 42 chr17 36590021 36590304 -52914249 - AluSx SINE Alu -37 275 1 832 158 0 0 chr17 36590456 36590589 -52913964 - FLAM_C SINE Alu 0 133 1 401 172 46 11 chr17 36590590 36590677 -52913876 + MLT1F LTR MaLR 442 531 -11 340 330 0 9 chr17 36590726 36590838 -52913715 + MIR SINE MIR 36 146 -62 871 205 0 0 chr17 36590919 36591075 -52913478 - FRAM SINE Alu -10 156 1 524 305 23 42 chr17 36591280 36591620 -52912933 + MLT1L LTR MaLR 20 421 -194 183 375 50 12 chr17 36591754 36591834 -52912719 - L2 LINE L2 -63 3209 3127 362 266 139 0 chr17 36592205 36592378 -52912175 + MER117 DNA MER1_type 1 197 0 180 0 0 0 chr17 36593384 36593404 -52911149 + (CAA)n Simple_repeat Simple_repeat 2 21 0 288 216 137 49 chr17 36593413 36593515 -52911038 - L1MD2 LINE L1 -21 6338 6228 841 128 0 24 chr17 36593524 36593649 -52910904 + FLAM_A SINE Alu 20 141 -1 4086 170 37 26 chr17 36593652 36593982 -52910571 - L1MD2 LINE L1 -122 6237 5912 2414 106 0 0 chr17 36593982 36594293 -52910260 - AluSx SINE Alu -1 311 1 4086 170 37 26 chr17 36594293 36594798 -52909755 - L1MD2 LINE L1 -447 5912 5393 2438 88 3 0 chr17 36594798 36595093 -52909460 - AluSp SINE Alu -17 296 1 1829 152 0 37 chr17 36595093 36595388 -52909165 - AluJb SINE Alu -16 296 13 1414 219 94 13 chr17 36595389 36595837 -52908716 - L1MD2 LINE L1 -814 5332 4849 840 100 0 18 chr17 36595839 36595949 -52908604 + AluJ SINE Alu 24 131 -181 2053 89 22 0 chr17 36595951 36596222 -52908331 + AluSq SINE Alu 1 277 -36 2105 84 94 7 chr17 36596223 36596509 -52908044 + AluSp SINE Alu 1 311 -2 1065 149 0 28 chr17 36596524 36596705 -52907848 + AluJ SINE Alu 120 295 -17 1643 229 25 71 chr17 36596705 36597191 -52907362 - L1MD2 LINE L1 -1291 4855 4348 2239 90 4 0 chr17 36597191 36597502 -52907051 - AluY SINE Alu 0 312 1 2123 143 7 0 chr17 36597503 36597804 -52906749 - AluSx SINE Alu -9 303 1 1643 229 25 71 chr17 36597804 36597947 -52906606 - L1MD2 LINE L1 -1797 4349 4252 325 222 78 0 chr17 36597965 36598055 -52906498 + L2 LINE L2 3201 3297 -16 2429 84 3 0 chr17 36598398 36598695 -52905858 - AluSx SINE Alu -14 298 1 813 198 0 39 chr17 36598883 36599065 -52905488 + MER5A DNA MER1_type 14 188 -1 208 140 60 60 chr17 36599072 36599117 -52905436 + MER5B DNA MER1_type 2 47 -127 2563 58 0 0 chr17 36599117 36599410 -52905143 + AluY SINE Alu 1 293 -18 468 243 110 0 chr17 36599428 36599463 -52905090 + MER5B DNA MER1_type 28 58 -120 684 175 16 74 chr17 36599463 36599528 -52905025 - MER5B DNA MER1_type 0 178 111 1948 139 9 35 chr17 36599528 36599845 -52904708 + AluJo SINE Alu 1 309 -3 684 175 16 74 chr17 36599845 36599968 -52904585 - MER5B DNA MER1_type -67 111 1 468 243 110 0 chr17 36599968 36600068 -52904485 + MER5B DNA MER1_type 58 178 0 423 240 40 0 chr17 36600549 36600649 -52903904 - MER103 DNA DNA -62 104 1 2283 88 7 7 chr17 36600714 36601008 -52903545 + AluSc SINE Alu 1 294 -15 604 35 0 24 chr17 36601114 36601199 -52903354 + (GAAA)n Simple_repeat Simple_repeat 3 85 0 210 71 0 0 chr17 36601255 36601283 -52903270 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 501 272 19 105 chr17 36601527 36601666 -52902887 + MIR SINE MIR 17 127 -135 2353 81 0 0 chr17 36601666 36601979 -52902574 - AluY SINE Alu 0 313 1 501 272 19 105 chr17 36601979 36602095 -52902458 + MIR SINE MIR 127 251 -11 189 350 120 0 chr17 36602328 36602445 -52902108 + L2 LINE L2 3175 3305 -8 1919 118 14 44 chr17 36602687 36602984 -52901569 - AluSx SINE Alu -22 290 3 202 271 198 0 chr17 36603111 36603173 -52901380 + MIR SINE MIR 138 252 -10 228 88 29 0 chr17 36603173 36603207 -52901346 + L2 LINE L2 3222 3256 -16 1304 140 0 22 chr17 36603295 36603517 -52901036 + MER20 DNA MER1_type 1 217 -2 2221 110 0 23 chr17 36603926 36604235 -52900318 - AluSx SINE Alu -10 302 1 1921 125 6 51 chr17 36605461 36605774 -52898779 - AluJb SINE Alu -13 299 1 31 0 0 0 chr17 36605776 36605807 -52898746 + AT_rich Low_complexity Low_complexity 1 31 0 610 201 101 34 chr17 36605905 36606084 -52898469 - MIR SINE MIR -55 207 17 225 306 16 0 chr17 36606562 36606624 -52897929 - MIR3 SINE MIR -10 198 136 444 118 0 0 chr17 36607105 36607173 -52897380 + (TCCC)n Simple_repeat Simple_repeat 1 68 0 1929 141 7 23 chr17 36607173 36607343 -52897210 - AluJb SINE Alu -13 299 135 459 0 0 0 chr17 36607343 36607394 -52897159 + (TA)n Simple_repeat Simple_repeat 1 51 0 1929 141 7 23 chr17 36607394 36607522 -52897031 - AluJb SINE Alu -177 135 6 542 240 34 120 chr17 36607921 36608271 -52896282 - L2 LINE L2 -5 3267 2948 770 238 18 6 chr17 36608292 36608456 -52896097 + MER45A DNA AcHobo 13 178 0 291 315 65 65 chr17 36608556 36608641 -52895912 + MIR SINE MIR 28 112 -150 2002 133 0 25 chr17 36608641 36608927 -52895626 + AluSx SINE Alu 1 279 -33 186 71 0 0 chr17 36608927 36608955 -52895598 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 291 315 65 65 chr17 36608955 36609068 -52895485 + MIR SINE MIR 110 227 -35 766 245 29 29 chr17 36609356 36609433 -52895120 - MER112 DNA MER1_type -16 244 168 2249 85 4 4 chr17 36609433 36609737 -52894816 + AluSc SINE Alu 1 304 0 766 245 29 29 chr17 36609737 36609899 -52894654 - MER112 DNA MER1_type -91 169 4 2297 122 0 0 chr17 36609951 36610263 -52894290 + AluSx SINE Alu 1 312 0 341 310 191 8 chr17 36610295 36610354 -52894199 + L1ME3A LINE L1 5683 5730 -440 1588 152 130 4 chr17 36610354 36610624 -52893929 + AluJb SINE Alu 1 304 -8 341 310 191 8 chr17 36610624 36610793 -52893760 + L1ME3A LINE L1 5730 5952 -218 362 253 0 33 chr17 36610963 36611054 -52893499 + L1MC5 LINE L1 7838 7925 -36 2187 129 0 3 chr17 36611105 36611407 -52893146 - AluSx SINE Alu -11 301 1 247 307 15 36 chr17 36611475 36611612 -52892941 - Charlie7 DNA MER1_type -2471 141 8 285 291 133 46 chr17 36611633 36611683 -52892870 + MER5A DNA MER1_type 4 48 -141 2278 119 3 0 chr17 36611683 36611985 -52892568 - AluSg SINE Alu -7 303 1 285 291 133 46 chr17 36611985 36612085 -52892468 + MER5A DNA MER1_type 48 167 -22 413 252 114 8 chr17 36613063 36613186 -52891367 - MER5A DNA MER1_type -53 136 1 711 228 16 36 chr17 36613396 36613589 -52890964 + MER5A DNA MER1_type 1 189 0 319 266 149 0 chr17 36613687 36613820 -52890733 + MIR SINE MIR 16 183 -25 184 244 0 0 chr17 36613789 36613830 -52890723 + L3 LINE CR1 1526 1566 -11 * 3610 116 8 0 chr17 36613845 36614361 -52890192 - MER1A DNA MER1_type -9 520 1 186 230 184 0 chr17 36616227 36616314 -52888239 + MIR SINE MIR 31 133 -129 250 243 54 0 chr17 36616901 36616975 -52887578 + MER3 DNA MER1_type 1 78 -131 198 296 0 0 chr17 36617991 36618035 -52886518 - MIR SINE MIR -190 72 29 350 265 109 41 chr17 36618764 36618911 -52885642 - MER5B DNA MER1_type 0 178 22 307 284 49 0 chr17 36619071 36619173 -52885380 + MIR SINE MIR 77 183 -79 627 201 151 0 chr17 36619310 36619469 -52885084 - MER5A DNA MER1_type 0 189 7 2184 136 0 0 chr17 36619590 36619885 -52884668 - AluSx SINE Alu -17 295 1 222 254 34 0 chr17 36620002 36620061 -52884492 - MIR SINE MIR -142 120 60 222 253 169 12 chr17 36620416 36620499 -52884054 + MIR3 SINE MIR 15 110 -98 227 288 0 15 chr17 36620595 36620661 -52883892 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 273 229 193 0 chr17 36622780 36622863 -52881690 + L2 LINE L2 3174 3272 0 375 307 60 104 chr17 36622946 36623153 -52881400 - MIR SINE MIR -1 261 74 949 138 0 133 chr17 36623153 36623300 -52881253 + MER5A DNA MER1_type 1 111 -78 2112 147 10 0 chr17 36623300 36623607 -52880946 - AluSx SINE Alu -2 310 1 949 138 0 133 chr17 36623607 36623677 -52880876 + MER5A DNA MER1_type 111 189 0 375 307 60 104 chr17 36623677 36623723 -52880830 - MIR SINE MIR -188 74 28 979 167 14 76 chr17 36623858 36624068 -52880485 + AluJo SINE Alu 98 294 -18 258 215 62 0 chr17 36624413 36624478 -52880075 - MIR SINE MIR -115 147 79 2252 91 0 3 chr17 36625084 36625392 -52879161 - AluSx SINE Alu 0 307 1 2259 120 3 0 chr17 36625452 36625753 -52878800 - AluSx SINE Alu -10 302 1 310 278 52 26 chr17 36625979 36626094 -52878459 - MER5A DNA MER1_type -22 167 50 2385 59 3 30 chr17 36626148 36626475 -52878078 + AluSc SINE Alu 1 319 0 268 319 133 7 chr17 36626497 36626632 -52877921 + MIR SINE MIR 49 200 -62 21 36 0 0 chr17 36627096 36627124 -52877429 + GC_rich Low_complexity Low_complexity 1 28 0 1558 154 7 48 chr17 36627423 36627716 -52876837 - AluJo SINE Alu -21 291 11 1599 106 0 5 chr17 36627816 36628024 -52876529 + AluSg/x SINE Alu 84 290 -20 255 299 162 0 chr17 36628067 36628308 -52876245 - L1ME4a LINE L1 -16 6105 5826 255 263 84 0 chr17 36628456 36628551 -52876002 - L1ME4a LINE L1 -292 5829 5727 871 86 0 0 chr17 36628607 36628751 -52875802 - AluSx SINE Alu 0 321 178 1157 80 0 0 chr17 36628752 36628890 -52875663 - AluSx SINE Alu -174 138 1 654 301 60 34 chr17 36628890 36629242 -52875311 - L1ME4a LINE L1 -449 5672 5312 1719 186 37 0 chr17 36629262 36629558 -52874995 - AluJo SINE Alu -5 307 1 242 206 46 86 chr17 36629663 36629799 -52874754 - MLT1G3 LTR MaLR -232 363 158 649 277 71 25 chr17 36629920 36630202 -52874351 - L3 LINE CR1 -140 1437 1143 305 213 250 0 chr17 36630487 36630595 -52873958 + L3 LINE CR1 1373 1507 -70 2838 79 2 83 chr17 36631321 36631817 -52872736 - MER4C LTR ERV1 0 465 10 1927 142 14 10 chr17 36631831 36632126 -52872427 - AluJo SINE Alu -16 296 1 2950 208 39 47 chr17 36633002 36633743 -52870810 + MER21B LTR ERV1 5 739 -124 690 129 45 30 chr17 36633840 36633972 -52870581 - FLAM_C SINE Alu -4 139 6 1423 113 44 10 chr17 36633984 36634188 -52870365 - AluSq SINE Alu -19 294 84 675 290 59 35 chr17 36634350 36634605 -52869948 + MIR SINE MIR 2 262 0 183 300 38 38 chr17 36634670 36634750 -52869803 + L2 LINE L2 3129 3208 -64 482 211 57 6 chr17 36634913 36635060 -52869493 - MIR SINE MIR -3 259 105 378 290 142 0 chr17 36635096 36635251 -52869302 - MIR3 SINE MIR -12 196 20 2238 210 72 11 chr17 36635589 36636113 -52868440 - MLT1F1 LTR MaLR 0 567 12 819 154 80 6 chr17 36636113 36636275 -52868278 - FAM SINE Alu -1 174 1 1648 142 95 22 chr17 36636278 36636552 -52868001 - AluJo SINE Alu -18 294 1 254 232 93 28 chr17 36636781 36636888 -52867665 - MER5A DNA MER1_type -42 147 23 434 159 1 13 chr17 36636930 36637018 -52867535 - MER58 DNA MER1_type 0 2420 128 2355 108 0 3 chr17 36637044 36637351 -52867202 + AluSx SINE Alu 1 306 -6 1741 168 0 54 chr17 36637357 36637672 -52866881 + AluJo SINE Alu 1 298 -14 272 255 31 20 chr17 36638169 36638267 -52866286 - MIR3 SINE MIR -107 101 3 897 254 181 6 chr17 36638606 36638737 -52865816 + LTR16A LTR ERVL 62 169 -281 1650 189 24 7 chr17 36638737 36639028 -52865525 + AluJo SINE Alu 11 306 -6 897 254 181 6 chr17 36639028 36639227 -52865326 + LTR16A LTR ERVL 169 450 0 563 257 69 6 chr17 36639231 36639406 -52865147 - MIR SINE MIR -64 198 13 2262 119 0 19 chr17 36640077 36640395 -52864158 - AluSx SINE Alu 0 312 1 2001 97 3 85 chr17 36640400 36640729 -52863824 - AluSx SINE Alu -9 303 2 285 421 0 7 chr17 36641017 36641162 -52863391 - L2 LINE L2 -195 3077 2934 216 0 0 0 chr17 36641918 36641942 -52862611 + (A)n Simple_repeat Simple_repeat 1 24 0 1908 168 0 3 chr17 36641942 36642245 -52862308 + AluJb SINE Alu 1 302 -10 240 245 126 66 chr17 36643380 36643531 -52861022 - L1ME4a LINE L1 -3 6118 5959 2202 137 3 0 chr17 36643631 36643937 -52860616 - AluSx SINE Alu -5 307 1 2124 168 67 45 chr17 36644444 36644505 -52860048 - MLT1D LTR MaLR 0 505 447 2354 107 3 0 chr17 36644505 36644814 -52859739 - AluSx SINE Alu -2 310 1 2124 168 67 45 chr17 36644814 36645203 -52859350 - MLT1D LTR MaLR -58 447 41 2419 78 3 0 chr17 36645203 36645499 -52859054 - AluY SINE Alu -14 297 1 2124 168 67 45 chr17 36645499 36645541 -52859012 - MLT1D LTR MaLR -464 41 1 1832 186 0 0 chr17 36645926 36646238 -52858315 + AluJo SINE Alu 1 312 0 830 171 18 15 chr17 36646252 36646569 -52857984 + GA-rich Low_complexity Low_complexity 1 318 0 403 293 70 8 chr17 36646812 36647054 -52857499 - L2 LINE L2 -212 3060 2804 400 329 105 9 chr17 36647655 36647874 -52856679 + MIR SINE MIR 21 260 -2 1462 125 0 0 chr17 36647891 36648099 -52856454 + AluSp SINE Alu 106 313 0 273 279 193 7 chr17 36648654 36648794 -52855759 + MIR SINE MIR 47 212 -50 2156 130 0 9 chr17 36649190 36649588 -52854965 - AluSx SINE Alu 0 395 1 8074 48 7 12 chr17 36649608 36650740 -52853813 - L1P2 LINE L1 -678 5476 4357 4766 53 28 13 chr17 36650686 36651304 -52853249 + L1PA6 LINE L1 5528 6154 0 * 698 239 80 32 chr17 36651371 36651622 -52852931 - MLT1K LTR MaLR -7 581 319 324 0 0 0 chr17 36651642 36651678 -52852875 + (GA)n Simple_repeat Simple_repeat 1 36 0 238 273 122 29 chr17 36651708 36651847 -52852706 - MLT1K LTR MaLR -352 236 85 1955 153 0 0 chr17 36652897 36653172 -52851381 + AluSx SINE Alu 1 275 -37 571 254 155 68 chr17 36653407 36653512 -52851041 - MLT1J2 LTR MaLR -19 431 337 2331 84 0 7 chr17 36653512 36653809 -52850744 - AluSc SINE Alu -14 295 1 571 254 155 68 chr17 36653809 36654057 -52850496 - MLT1J2 LTR MaLR -113 337 47 193 125 0 0 chr17 36654690 36654722 -52849831 - L2 LINE L2 -217 3055 3024 283 222 167 22 chr17 36655759 36655849 -52848704 - MER5A DNA MER1_type -6 183 81 770 201 72 31 chr17 36655964 36656189 -52848364 - MIR SINE MIR -22 240 1 2348 95 0 19 chr17 36656710 36657026 -52847527 - AluSg SINE Alu 0 310 1 415 273 147 4 chr17 36657073 36657262 -52847291 - MIR SINE MIR -13 249 30 1045 199 61 132 chr17 36657265 36657691 -52846862 - MSTD LTR MaLR 0 396 1 939 279 81 70 chr17 36658613 36659130 -52845423 - MLT1K LTR MaLR -43 545 23 1319 133 13 49 chr17 36659888 36660113 -52844440 - AluJo SINE Alu -11 301 85 489 182 25 119 chr17 36660997 36661156 -52843397 + L1M4 LINE L1 3427 3570 -2576 1014 108 7 0 chr17 36661165 36661304 -52843249 - AluJb SINE Alu -6 306 167 681 124 177 0 chr17 36661417 36661530 -52843023 - AluJb SINE Alu -178 134 2 1694 261 78 2 chr17 36661539 36662102 -52842451 + L1M4 LINE L1 3576 4181 -1965 29 0 0 0 chr17 36663456 36663485 -52841068 + AT_rich Low_complexity Low_complexity 1 29 0 1137 157 25 15 chr17 36663510 36663707 -52840846 - L1PB4 LINE L1 -7 6149 5951 9958 42 14 131 chr17 36665898 36667433 -52837120 - SVA Other Other 0 1386 32 225 0 0 0 chr17 36667438 36667463 -52837090 + (GGGAGA)n Simple_repeat Simple_repeat 1 25 0 952 139 377 9 chr17 36667537 36667752 -52836801 - AluJo SINE Alu -8 304 11 291 111 0 0 chr17 36667841 36667886 -52836667 - LOR1a LTR ERV1 -214 283 239 1506 114 36 293 chr17 36667903 36668608 -52835945 - L1 LINE L1 -840 5306 4795 269 31 0 0 chr17 36668608 36668640 -52835913 - U2 snRNA snRNA -156 32 1 1506 114 36 293 chr17 36668640 36668713 -52835840 - L1 LINE L1 -1351 4795 4705 189 0 0 0 chr17 36668781 36668802 -52835751 + (T)n Simple_repeat Simple_repeat 1 21 0 1009 201 126 31 chr17 36668825 36669079 -52835474 - AluJo SINE Alu -14 298 21 44350 46 1 4 chr17 36669137 36670640 -52833913 - L1PA4 LINE L1 0 6155 4650 8236 82 7 8 chr17 36670640 36671713 -52832840 + MER11C LTR ERVK 1 1071 0 44350 46 1 4 chr17 36671713 36676379 -52828174 - L1PA4 LINE L1 -1505 4650 1 1484 224 90 61 chr17 36676383 36676907 -52827646 - L1 LINE L1 -1537 4609 4057 1716 163 69 107 chr17 36676907 36677114 -52827439 + MSTB1 LTR MaLR 1 214 -218 1711 181 0 27 chr17 36677114 36677413 -52827140 - AluJo SINE Alu -17 295 5 1716 163 69 107 chr17 36677413 36677654 -52826899 + MSTB1 LTR MaLR 214 432 0 1484 224 90 61 chr17 36677654 36677838 -52826715 - L1 LINE L1 -2089 4057 3880 227 171 0 0 chr17 36677839 36677880 -52826673 + CT-rich Low_complexity Low_complexity 2 42 0 643 162 147 0 chr17 36677902 36678038 -52826515 - L1 LINE L1 -2186 3960 3805 * 3933 151 29 80 chr17 36678037 36678593 -52825960 + L1MA7 LINE L1 5341 5714 -469 1825 146 32 14 chr17 36678593 36678874 -52825679 + AluSx SINE Alu 1 286 -26 3933 151 29 80 chr17 36678874 36679320 -52825233 + L1MA7 LINE L1 5714 6181 -2 928 262 92 22 chr17 36679386 36679914 -52824639 + L1ME3A LINE L1 4142 4710 -1436 756 165 0 8 chr17 36679916 36680037 -52824516 + AluJ SINE Alu 2 121 -191 1077 220 42 132 chr17 36680059 36680681 -52823872 + L1ME3A LINE L1 4693 5258 -888 1306 182 0 4 chr17 36680682 36680907 -52823646 + AluJo SINE Alu 85 308 -4 963 208 54 82 chr17 36680907 36681355 -52823198 + L1PA11 LINE L1 5326 6012 -162 * 2334 129 2 77 chr17 36681062 36681479 -52823074 + L1PB3 LINE L1 5749 6134 -20 1793 133 0 56 chr17 36681504 36681827 -52822726 + AluJo SINE Alu 1 305 -7 1338 250 135 46 chr17 36681827 36682449 -52822104 + L1ME3A LINE L1 5475 6155 -15 194 293 0 0 chr17 36682476 36682534 -52822019 + MIR SINE MIR 151 208 -54 903 177 0 32 chr17 36683145 36683303 -52821250 + AluJ SINE Alu 128 280 -32 199 0 65 0 chr17 36683303 36683334 -52821219 + (CAAT)n Simple_repeat Simple_repeat 4 36 0 1941 159 3 7 chr17 36683866 36684167 -52820386 + AluJo SINE Alu 1 300 -12 888 262 258 17 chr17 36685109 36685705 -52818848 - HAL1 LINE L1 -14 2493 1754 215 170 0 57 chr17 36686262 36686315 -52818238 + A-rich Low_complexity Low_complexity 5 54 0 249 172 52 0 chr17 36686547 36686605 -52817948 - L1MD3 LINE L1 0 7995 7935 444 250 0 0 chr17 36686605 36686693 -52817860 - FRAM/FAM SINE Alu -97 88 1 192 277 99 99 chr17 36686735 36686988 -52817565 + L2 LINE L2 2038 2290 -1024 333 370 40 12 chr17 36687008 36687259 -52817294 + L2 LINE L2 2489 2746 -568 208 286 0 0 chr17 36687380 36687436 -52817117 + L2 LINE L2 3258 3313 0 428 292 9 0 chr17 36687580 36687693 -52816860 - L2 LINE L2 -20 3252 3139 2103 177 49 12 chr17 36688028 36688434 -52816119 + MER65C LTR ERV1 2 422 -39 301 137 20 0 chr17 36688479 36688530 -52816023 + MER65B LTR ERV1 480 531 0 323 219 0 0 chr17 36688588 36688652 -52815901 + MER5A DNA MER1_type 40 103 -86 2255 106 30 0 chr17 36688662 36689009 -52815544 - AluSx SINE Alu 0 356 1 2312 125 0 0 chr17 36689016 36689321 -52815232 - AluSx SINE Alu -7 305 1 1707 189 3 12 chr17 36689586 36689908 -52814645 - L1MC1 LINE L1 0 6333 6015 1335 148 5 31 chr17 36690466 36690689 -52813864 - AluJo SINE Alu -12 300 84 326 283 243 0 chr17 36690765 36690917 -52813636 - MIR SINE MIR -67 195 7 1852 142 3 46 chr17 36691172 36691475 -52813078 + AluSx SINE Alu 7 296 -16 1883 161 0 7 chr17 36691855 36692161 -52812392 + AluJo SINE Alu 1 304 0 263 304 201 14 chr17 36692547 36692761 -52811792 - MIR SINE MIR -3 259 6 1081 258 89 42 chr17 36692851 36693052 -52811501 + MLT1H1 LTR MaLR 24 214 -341 2030 103 0 58 chr17 36693052 36693362 -52811191 + AluSq SINE Alu 1 292 -21 1081 258 89 42 chr17 36693362 36693658 -52810895 + MLT1H1 LTR MaLR 214 542 -13 267 219 0 16 chr17 36693675 36693739 -52810814 + MLT1H1-int LTR MaLR 9 71 -1300 237 351 0 0 chr17 36693739 36693816 -52810737 - MIR SINE MIR -139 123 47 222 118 0 0 chr17 36694126 36694160 -52810393 + (CA)n Simple_repeat Simple_repeat 1 34 0 357 195 0 24 chr17 36694178 36694260 -52810293 - L1MC5 LINE L1 -50 7911 7832 358 103 0 128 chr17 36694307 36694385 -52810168 - AluSp/q SINE Alu -1 302 235 459 195 23 62 chr17 36694387 36694515 -52810038 - L1MC5 LINE L1 -177 7784 7662 1126 174 0 46 chr17 36694523 36694741 -52809812 - AluJo SINE Alu -20 292 85 1336 144 0 42 chr17 36694856 36695071 -52809482 - AluJo SINE Alu -106 206 1 796 167 0 8 chr17 36695093 36695219 -52809334 - FLAM_C SINE Alu -8 125 1 186 133 0 0 chr17 36695295 36695325 -52809228 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 619 280 41 12 chr17 36695369 36695640 -52808913 - L1MC5 LINE L1 -377 7584 7306 500 222 215 0 chr17 36695883 36696027 -52808526 - MER5B DNA MER1_type -1 177 3 863 252 26 52 chr17 36696034 36696344 -52808209 - L1MC5 LINE L1 -727 7234 6933 209 318 131 0 chr17 36696865 36696972 -52807581 - MIR SINE MIR -10 252 132 194 0 0 37 chr17 36697435 36697462 -52807091 + (CAAG)n Simple_repeat Simple_repeat 3 28 0 2396 96 0 6 chr17 36697725 36698038 -52806515 - AluSx SINE Alu -1 311 1 1523 229 46 8 chr17 36698320 36698692 -52805861 + MLT1C LTR MaLR 82 467 0 1812 169 31 0 chr17 36698951 36699241 -52805312 - AluSx SINE Alu -11 301 3 1815 167 6 22 chr17 36699717 36700029 -52804524 - AluJb SINE Alu -5 307 1 2008 169 20 31 chr17 36700273 36700664 -52803889 + MLT1B LTR MaLR 1 387 -3 2167 148 120 5 chr17 36700840 36701224 -52803329 - MSTA LTR MaLR 0 428 1 5802 57 16 51 chr17 36701294 36702113 -52802440 - L1PA13 LINE L1 -18 6145 5356 842 222 91 49 chr17 36702129 36702260 -52802293 - L1MC4 LINE L1 0 8042 7918 237 65 0 0 chr17 36702260 36702291 -52802262 + (TCTA)n Simple_repeat Simple_repeat 1 31 0 842 222 91 49 chr17 36702291 36702488 -52802065 - L1MC4 LINE L1 -124 7918 7700 1298 271 51 15 chr17 36702522 36702931 -52801622 - LTR16B LTR ERVL -40 424 1 1959 149 27 0 chr17 36702940 36703235 -52801318 - AluSx SINE Alu -9 303 1 341 339 6 33 chr17 36703355 36703703 -52800850 - MERVL LTR ERVL -153 5332 4555 2254 331 25 12 chr17 36703827 36704801 -52799752 - HERV16 LTR ERVL -826 4828 3843 7092 58 22 0 chr17 36704865 36705837 -52798716 - L1PA7 LINE L1 -8 6146 5168 198 103 0 0 chr17 36705852 36705881 -52798672 + (TTC)n Simple_repeat Simple_repeat 2 30 0 913 191 0 0 chr17 36705888 36706040 -52798513 - FRAM SINE Alu -30 146 1 3835 314 74 22 chr17 36706042 36708205 -52796348 - HERV16 LTR ERVL -1658 3827 1567 1027 283 11 34 chr17 36708252 36708602 -52795951 - HERV16 LTR ERVL -3569 1427 1086 581 276 51 12 chr17 36708611 36708905 -52795648 - LTR16B LTR ERVL -114 350 12 699 208 72 86 chr17 36708905 36709046 -52795507 - L1MC4 LINE L1 -326 7716 7575 794 159 0 15 chr17 36709046 36709178 -52795375 - FLAM_A SINE Alu 0 133 4 699 208 72 86 chr17 36709178 36709426 -52795127 - L1MC4 LINE L1 -467 7575 7259 2376 84 0 22 chr17 36710252 36710563 -52793990 + AluY SINE Alu 1 304 -7 352 0 42 0 chr17 36710655 36710703 -52793850 + (GA)n Simple_repeat Simple_repeat 1 50 0 1583 154 6 69 chr17 36711175 36711363 -52793190 - AluJo SINE Alu -14 298 135 2015 129 0 4 chr17 36711363 36711670 -52792883 + AluSg SINE Alu 1 306 0 1583 154 6 69 chr17 36711670 36711798 -52792755 - AluJo SINE Alu -177 135 1 191 36 36 0 chr17 36713498 36713526 -52791027 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 239 245 21 53 chr17 36714531 36714625 -52789928 - LTR31 LTR ERV1 -79 540 450 1407 95 9 81 chr17 36715313 36715535 -52789018 + AluSx SINE Alu 1 206 -106 2038 174 93 19 chr17 36715684 36716190 -52788363 - Tigger7 DNA MER2_type -1 2486 2 3053 211 32 38 chr17 36716237 36716954 -52787599 - L1ME1 LINE L1 -247 5919 5199 1186 98 21 36 chr17 36716954 36717148 -52787405 - L1PA11 LINE L1 0 6174 5984 3053 211 32 38 chr17 36717148 36717242 -52787311 - L1ME1 LINE L1 -967 5199 5119 2103 120 3 3 chr17 36717242 36717541 -52787012 + AluSx SINE Alu 1 299 -13 3053 211 32 38 chr17 36717541 36717635 -52786918 - L1ME1 LINE L1 -1047 5119 5026 1957 209 19 8 chr17 36717635 36718086 -52786467 + MER89 LTR ERV1 1 555 -4 7339 200 83 92 chr17 36718404 36719216 -52785337 + MER89-int LTR ERV1 290 1108 -5693 338 87 0 0 chr17 36719216 36719262 -52785291 + MADE1 DNA Mariner 1 46 -34 7339 200 83 92 chr17 36719262 36720679 -52783874 + MER89-int LTR ERV1 1108 2543 -4258 3247 242 53 62 chr17 36720698 36721088 -52783465 + MER89-int LTR ERV1 110 502 -6299 2478 34 14 14 chr17 36721088 36721384 -52783169 + AluY SINE Alu 1 296 -15 3247 242 53 62 chr17 36721384 36722097 -52782456 + MER89-int LTR ERV1 502 3358 -3443 2639 46 3 0 chr17 36722106 36722412 -52782141 - AluY SINE Alu -2 309 3 1993 105 0 0 chr17 36722414 36722671 -52781882 - AluSx SINE Alu -2 310 54 584 197 17 101 chr17 36722674 36722852 -52781701 + MER89-int LTR ERV1 4127 4289 -2512 1756 167 27 10 chr17 36722862 36723156 -52781397 + AluJo SINE Alu 5 303 -9 323 258 75 30 chr17 36723206 36723417 -52781136 - L1MCa LINE L1 -999 1788 1359 331 246 14 0 chr17 36723428 36723497 -52781056 - L1MCa LINE L1 -6292 315 246 1787 191 52 3 chr17 36723687 36724032 -52780521 - MLT1A1 LTR MaLR 0 365 4 1092 168 24 39 chr17 36724096 36724304 -52780249 - AluJo SINE Alu -26 286 82 25 0 0 0 chr17 36725195 36725220 -52779333 + AT_rich Low_complexity Low_complexity 1 25 0 742 199 11 52 chr17 36725341 36725532 -52779021 + pTR5 LTR ERV1 742 924 -1514 585 150 0 80 chr17 36725642 36725755 -52778798 + MER1B DNA MER1_type 217 320 -19 2115 126 45 34 chr17 36726789 36727146 -52777407 - THE1B LTR MaLR -3 361 1 1947 103 50 4 chr17 36729046 36729307 -52775246 + AluSx SINE Alu 3 275 -37 197 32 0 32 chr17 36729312 36729343 -52775210 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 572 258 89 4 chr17 36729740 36729988 -52774565 + L1ME3A LINE L1 4932 5200 -946 849 149 8 0 chr17 36729988 36730109 -52774444 + FLAM_C SINE Alu 1 122 -21 451 193 12 0 chr17 36730115 36730198 -52774355 - AluJo SINE Alu -157 155 72 826 140 81 0 chr17 36730298 36730434 -52774119 - MER1B DNA MER1_type -150 147 1 180 308 77 48 chr17 36730577 36730681 -52773872 + MIR SINE MIR 4 110 -152 2210 110 0 0 chr17 36730890 36731189 -52773364 - AluSq SINE Alu -14 299 1 372 212 44 9 chr17 36731189 36731315 -52773238 + L1ME3A LINE L1 5834 5963 -207 21 0 0 0 chr17 36731508 36731529 -52773024 + AT_rich Low_complexity Low_complexity 1 21 0 252 256 139 23 chr17 36731901 36732030 -52772523 - L1ME4a LINE L1 -15 6106 5963 180 0 0 0 chr17 36732219 36732239 -52772314 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2324 97 0 0 chr17 36732242 36732531 -52772022 - AluSx SINE Alu -23 289 1 933 257 102 35 chr17 36732817 36733249 -52771304 + HAL1 LINE L1 1752 2212 -295 1147 135 0 0 chr17 36733268 36733424 -52771129 + AluSx SINE Alu 1 156 -156 342 0 0 0 chr17 36735747 36735785 -52768768 + (TG)n Simple_repeat Simple_repeat 1 38 0 1830 172 33 7 chr17 36737133 36737254 -52767299 + AluJo SINE Alu 1 117 -195 267 103 0 0 chr17 36737254 36737293 -52767260 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1830 172 33 7 chr17 36737293 36737473 -52767080 + AluJo SINE Alu 117 310 -2 2122 137 0 0 chr17 36738162 36738454 -52766099 + AluSx SINE Alu 5 296 -16 827 159 0 181 chr17 36738546 36738817 -52765736 - L1MEc LINE L1 -6133 263 42 891 261 97 18 chr17 36738821 36739151 -52765402 + HAL1b LINE L1 445 800 -548 468 266 125 11 chr17 36739640 36740001 -52764552 + HAL1b LINE L1 921 1322 -26 1089 134 4 121 chr17 36740362 36740593 -52763960 - MER20 DNA MER1_type 0 219 16 319 214 51 10 chr17 36740800 36740898 -52763655 + HAL1 LINE L1 1550 1651 -856 799 294 102 50 chr17 36741179 36741471 -52763082 + L1MC4a LINE L1 4357 4632 -1514 1972 148 0 10 chr17 36741471 36741769 -52762784 + AluJb SINE Alu 1 295 -17 799 294 102 50 chr17 36741769 36742932 -52761621 + L1MC4a LINE L1 4632 5338 -808 225 0 0 0 chr17 36743482 36743507 -52761046 + (CA)n Simple_repeat Simple_repeat 2 26 0 21986 48 65 1 chr17 36744094 36747903 -52756650 + L1P LINE L1 1 3980 -2166 3313 138 54 58 chr17 36747903 36749202 -52755351 - pTR5 LTR ERV1 -2 2436 66 12295 39 8 0 chr17 36749202 36751366 -52753187 + L1PA4 LINE L1 3977 6153 -2 464 227 10 0 chr17 36751713 36751810 -52752743 + MER5A DNA MER1_type 9 106 -83 418 233 108 16 chr17 36752049 36752178 -52752375 - MER96 DNA MER1_type? -14 161 21 1822 312 121 25 chr17 36752182 36753019 -52751534 + HERVL LTR ERVL 1359 2115 -3539 1318 176 123 11 chr17 36753019 36753280 -52751273 + AluSx SINE Alu 1 290 -22 1822 312 121 25 chr17 36753280 36754440 -52750113 + HERVL LTR ERVL 2115 3598 -2056 1238 185 63 119 chr17 36754824 36755202 -52749351 - MER57A LTR ERV1 -4 399 43 740 268 84 23 chr17 36755421 36755682 -52748871 + LTR33 LTR ERVL 3 279 -242 385 218 38 45 chr17 36755757 36755869 -52748684 + LTR33 LTR ERVL 381 493 -28 1068 202 202 35 chr17 36755869 36756241 -52748312 - MER57B LTR ERV1 0 434 1 385 218 38 45 chr17 36756241 36756261 -52748292 + LTR33 LTR ERVL 493 512 -9 230 214 18 18 chr17 36756317 36756373 -52748180 - MER5A DNA MER1_type -14 175 120 365 237 93 34 chr17 36756430 36756548 -52748005 + MER5A DNA MER1_type 9 133 -56 2752 88 3 24 chr17 36756637 36757014 -52747539 - L1PB1 LINE L1 -1 6150 5782 276 149 0 0 chr17 36757014 36757061 -52747492 + (TA)n Simple_repeat Simple_repeat 2 48 0 241 174 0 0 chr17 36757061 36757107 -52747446 + LTR66 LTR ERVL 394 439 -171 197 208 0 19 chr17 36757109 36757162 -52747391 + (CATA)n Simple_repeat Simple_repeat 2 53 0 560 173 20 0 chr17 36757162 36757286 -52747267 - L1PB1 LINE L1 -361 5790 5660 339 111 0 0 chr17 36757412 36757466 -52747087 - MADE1 DNA Mariner 0 80 27 1916 110 51 0 chr17 36757567 36757821 -52746732 + AluSg SINE Alu 1 267 -43 1287 183 133 76 chr17 36758458 36758825 -52745728 + MLT1B LTR MaLR 3 390 0 9028 209 38 33 chr17 36758825 36760415 -52744138 + L1MB7 LINE L1 2885 4493 -1653 1914 166 0 7 chr17 36760415 36760710 -52743843 + AluJb SINE Alu 1 293 -19 9028 209 38 33 chr17 36760710 36761424 -52743129 + L1MB7 LINE L1 4493 5202 -944 1549 189 36 17 chr17 36761425 36761726 -52742827 + AluJo SINE Alu 1 307 -5 2779 151 52 23 chr17 36761755 36762272 -52742281 + L1MB7 LINE L1 5651 6182 -2 6929 184 49 7 chr17 36763055 36763565 -52740988 + L1P5 LINE L1 3881 4368 -1788 183 80 0 0 chr17 36763565 36763590 -52740963 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 6929 184 49 7 chr17 36763590 36764447 -52740106 + L1P5 LINE L1 4368 5329 -827 201 74 0 0 chr17 36764447 36764474 -52740079 + (CAA)n Simple_repeat Simple_repeat 1 27 0 6929 184 49 7 chr17 36764474 36764668 -52739885 + L1P5 LINE L1 5329 5513 -643 1665 167 25 2 chr17 36765818 36766311 -52738242 + L1M2 LINE L1 5065 5566 -725 2661 100 17 0 chr17 36766311 36766660 -52737893 + THE1A LTR MaLR 1 355 0 5302 94 13 0 chr17 36766660 36767361 -52737192 + THE1A-int LTR MaLR 1 710 -870 2102 109 23 4 chr17 36767361 36767799 -52736754 + LTR19A LTR ERV1 1 486 0 16920 85 18 9 chr17 36767799 36768097 -52736456 + LTR19A-int LTR ERV1 1 295 -5291 405 39 0 0 chr17 36768097 36768148 -52736405 + (TC)n Simple_repeat Simple_repeat 2 52 0 16920 85 18 9 chr17 36768148 36770123 -52734430 + LTR19A-int LTR ERV1 295 2368 -3218 2500 82 0 0 chr17 36770123 36770428 -52734125 + AluY SINE Alu 1 305 -6 16920 85 18 9 chr17 36770428 36770569 -52733984 + LTR19A-int LTR ERV1 2368 2506 -3080 16199 134 11 106 chr17 36770569 36773982 -52730571 + L1PA7 LINE L1 1 3089 -3057 10898 87 1 13 chr17 36773982 36775395 -52729158 + HERV30 LTR ERV1 1751 3146 -5111 7381 107 31 4 chr17 36775388 36776418 -52728135 + HERV30 LTR ERV1 7197 8254 -3 * 5686 69 31 0 chr17 36776421 36777121 -52727432 + LTR30 LTR ERV1 1 722 0 15918 102 11 1 chr17 36777121 36780094 -52724459 + L1PA7 LINE L1 3191 6180 0 804 212 6 6 chr17 36780097 36780262 -52724291 + L1 LINE L1 2209 2373 -3773 1686 203 0 0 chr17 36780265 36780555 -52723998 + AluJb SINE Alu 1 290 -22 4190 111 33 4 chr17 36780555 36781253 -52723300 - L1M1 LINE L1 -4328 3237 2520 * 8446 176 50 15 chr17 36781241 36782950 -52721603 - L1PBb LINE L1 -3940 2263 403 230 296 80 45 chr17 36784219 36784418 -52720135 - L1PA12 LINE L1 -5503 2078 1873 473 266 184 37 chr17 36784522 36784876 -52719677 - L1PA12 LINE L1 -7166 415 10 1671 148 0 67 chr17 36784894 36785191 -52719362 - AluJo SINE Alu -14 298 22 336 343 46 52 chr17 36785204 36785510 -52719043 - HAL1b LINE L1 -947 401 98 1370 114 24 63 chr17 36785514 36785768 -52718785 - L1MC1 LINE L1 -5 6328 6085 2380 142 6 6 chr17 36785779 36786145 -52718408 - L1PB1 LINE L1 -3 6148 5783 225 226 0 0 chr17 36786156 36786218 -52718335 - L1MC4 LINE L1 -1339 6703 6642 * 1311 81 14 48 chr17 36786210 36786420 -52718133 - L1P5 LINE L1 -640 5511 5309 269 241 23 0 chr17 36786422 36786509 -52718044 - L1MC4 LINE L1 -1339 6703 6615 5277 172 43 19 chr17 36786553 36788258 -52716295 - L1P5 LINE L1 -360 5791 4048 256 286 12 12 chr17 36788260 36788344 -52716209 - HERVFH21 LTR ERV1 -543 5986 5903 * 3228 109 47 51 chr17 36788312 36788792 -52715761 - HERVFH21 LTR ERV1 -2910 5210 4731 2260 111 7 0 chr17 36788792 36789098 -52715455 - AluSp SINE Alu -5 308 1 3228 109 47 51 chr17 36789098 36789169 -52715384 - HERVFH21 LTR ERV1 -3389 4731 4661 1216 152 0 0 chr17 36789169 36789373 -52715180 - MST-int LTR MaLR -1399 252 49 1004 129 32 7 chr17 36789378 36789533 -52715020 - MSTA LTR MaLR -269 159 1 3965 149 100 0 chr17 36789535 36790177 -52714376 - L1M1 LINE L1 -5396 2169 1464 345 150 0 167 chr17 36790180 36790264 -52714289 + L1 LINE L1 3125 3186 -2960 2325 78 0 0 chr17 36790264 36790582 -52713971 - AluY SINE Alu 0 318 1 345 150 0 167 chr17 36790582 36790616 -52713937 + L1 LINE L1 3186 3224 -2922 498 135 108 0 chr17 36790616 36790690 -52713863 + AluJ/FLAM SINE Alu 1 82 -230 1179 174 5 0 chr17 36790690 36790891 -52713662 + L1 LINE L1 3834 4035 -2111 2029 146 9 0 chr17 36790894 36791448 -52713105 - L1P5 LINE L1 -599 5552 4993 1603 161 12 0 chr17 36791448 36791696 -52712857 + MER51-int LTR ERV1 7566 7816 0 2029 150 61 22 chr17 36791732 36792159 -52712394 + MER51A LTR ERV1 193 634 0 3923 106 16 24 chr17 36792162 36792786 -52711767 + LOR1b-int LTR ERV1 4844 5462 -2658 1945 170 170 166 chr17 36792786 36793294 -52711259 - LTR28 LTR ERV1 0 1020 505 2082 110 3 23 chr17 36793294 36793595 -52710958 + AluSg SINE Alu 1 295 -15 1945 170 170 166 chr17 36793595 36794091 -52710462 - LTR28 LTR ERV1 -515 505 12 622 93 12 0 chr17 36794091 36794177 -52710376 + LOR1b-int LTR ERV1 5978 6064 -2056 * 666 121 0 0 chr17 36794176 36794267 -52710286 + LOR1b-int LTR ERV1 8030 8120 0 2657 145 57 14 chr17 36794267 36794709 -52709844 + LOR1b LTR ERV1 1 461 0 2924 102 14 9 chr17 36794709 36795129 -52709424 + L1MA2 LINE L1 5879 6300 -4 382 241 46 0 chr17 36795139 36795226 -52709327 - L1ME LINE L1 -383 5783 5693 381 204 29 68 chr17 36795210 36795313 -52709240 + L1P LINE L1 4000 4098 -2048 * 186 71 0 0 chr17 36795318 36795346 -52709207 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 8163 208 20 9 chr17 36795346 36795881 -52708672 - L1 LINE L1 -1749 4397 3870 2308 84 3 17 chr17 36795881 36796179 -52708374 - AluSp SINE Alu -19 294 1 8163 208 20 9 chr17 36796179 36797661 -52706892 - L1 LINE L1 -2276 3870 2357 * 31352 106 9 25 chr17 36797636 36804116 -52700437 - L1PA7 LINE L1 -2 6467 1 6771 141 71 15 chr17 36804122 36805452 -52699101 - L1PBa LINE L1 -3758 3104 1698 2562 205 64 7 chr17 36805472 36806047 -52698506 + L1MC4 LINE L1 7296 7903 -139 1129 198 69 16 chr17 36806155 36806402 -52698151 - AluJo SINE Alu -11 301 42 741 168 92 0 chr17 36807164 36807283 -52697270 + FLAM_A SINE Alu 1 130 -3 1395 178 147 8 chr17 36807550 36807809 -52696744 + AluJb SINE Alu 1 295 -7 5610 197 39 25 chr17 36807984 36808486 -52696067 - L1MA9 LINE L1 -4 6308 5815 288 0 0 0 chr17 36808486 36808518 -52696035 + (TG)n Simple_repeat Simple_repeat 2 33 0 5610 197 39 25 chr17 36808518 36808694 -52695859 - L1MA9 LINE L1 -497 5815 5643 1532 211 0 13 chr17 36808694 36808997 -52695556 - AluJo SINE Alu -12 300 2 5610 197 39 25 chr17 36808997 36810224 -52694329 - L1MA9 LINE L1 -669 5643 4435 2138 140 3 0 chr17 36810224 36810531 -52694022 - AluSq SINE Alu -5 308 1 5610 197 39 25 chr17 36810531 36810662 -52693891 - L1MA9 LINE L1 -1877 4435 4307 7109 81 28 0 chr17 36810662 36811535 -52693018 + MER11D LTR ERVK 1 897 0 5610 197 39 25 chr17 36811535 36811666 -52692887 - L1MA9 LINE L1 -2005 4307 4106 294 67 0 0 chr17 36811716 36811761 -52692792 - Alu SINE Alu 0 300 256 230 263 25 12 chr17 36812626 36812706 -52691847 - MLT1I-int LTR MaLR -1654 81 1 1112 291 18 24 chr17 36812706 36813065 -52691488 - MLT1I LTR MaLR 0 409 74 435 312 116 0 chr17 36813103 36813292 -52691261 - MLT1J LTR MaLR -199 312 102 463 278 0 0 chr17 36813886 36814012 -52690541 + L1MA10 LINE L1 6202 6327 -7 1038 164 0 0 chr17 36814796 36814961 -52689592 + AluJb SINE Alu 131 295 -17 295 234 0 53 chr17 36815087 36815181 -52689372 + CT-rich Low_complexity Low_complexity 5 93 0 763 188 21 14 chr17 36815576 36815720 -52688833 + AluJo SINE Alu 5 149 -163 1514 162 54 11 chr17 36815722 36816000 -52688553 + AluJo SINE Alu 18 307 -5 403 234 32 0 chr17 36816018 36816112 -52688441 + LTR43 LTR ERV1 1 97 -505 2690 126 29 79 chr17 36816137 36816655 -52687898 + L1MA9 LINE L1 5625 6116 -196 2074 141 0 10 chr17 36816732 36817036 -52687517 - AluSx SINE Alu -7 305 5 491 165 25 25 chr17 36817069 36817190 -52687363 + L1MC3 LINE L1 6919 7039 -746 285 207 0 17 chr17 36817233 36817291 -52687262 + MLT1F1 LTR MaLR 45 101 -466 2695 176 38 55 chr17 36817295 36817675 -52686878 + L1MC3 LINE L1 7194 7579 -206 2629 51 0 6 chr17 36817675 36817986 -52686567 + AluY SINE Alu 1 309 -2 2695 176 38 55 chr17 36817986 36818105 -52686448 + L1MC3 LINE L1 7579 7698 -87 1458 203 0 14 chr17 36818105 36818381 -52686172 + AluJo SINE Alu 9 280 -32 522 0 0 0 chr17 36818381 36818439 -52686114 + (TAAAA)n Simple_repeat Simple_repeat 2 59 0 2695 176 38 55 chr17 36818439 36818538 -52686015 + L1MC3 LINE L1 7696 7784 -1 987 150 0 14 chr17 36818672 36818819 -52685734 + FRAM SINE Alu 12 156 -20 26 50 0 0 chr17 36819052 36819092 -52685461 + AT_rich Low_complexity Low_complexity 1 40 0 1191 182 39 113 chr17 36819646 36820036 -52684517 - MLT1A2 LTR MaLR -13 361 1 282 130 93 0 chr17 36820214 36820268 -52684285 + L1MC5 LINE L1 6683 6741 -1220 887 273 104 28 chr17 36820544 36820899 -52683654 + L1ME LINE L1 27 408 -5662 409 245 38 19 chr17 36822467 36822573 -52681980 - HsTC2 DNA Tc2 -1787 111 4 354 251 62 78 chr17 36822649 36822761 -52681792 - MIR3 SINE MIR -42 220 110 1117 171 0 0 chr17 36822761 36822925 -52681628 + FRAM SINE Alu 1 164 -2 354 251 62 78 chr17 36822925 36823034 -52681519 - MIR3 SINE MIR -152 110 1 445 285 78 22 chr17 36824190 36824509 -52680044 - L1M4 LINE L1 -867 5279 4943 316 83 48 12 chr17 36824684 36824768 -52679785 + (TA)n Simple_repeat Simple_repeat 2 88 0 216 129 0 65 chr17 36824770 36824832 -52679721 + (TAAAAA)n Simple_repeat Simple_repeat 2 59 0 261 131 56 0 chr17 36824832 36824939 -52679614 + (TA)n Simple_repeat Simple_repeat 1 113 0 251 286 115 47 chr17 36825152 36825733 -52678820 - L1M4 LINE L1 -1718 4428 3808 1120 182 0 0 chr17 36825860 36826019 -52678534 + FRAM SINE Alu 1 159 -7 225 348 0 0 chr17 36826444 36826513 -52678040 + MIR SINE MIR 54 122 -86 232 363 23 29 chr17 36826817 36826988 -52677565 - MER5A DNA MER1_type -4 185 16 872 167 0 0 chr17 36827815 36827941 -52676612 + FRAM SINE Alu 4 129 -47 848 227 12 0 chr17 36828452 36828615 -52675938 - FRAM SINE Alu -11 165 1 2072 110 39 0 chr17 36828742 36829023 -52675530 - AluSx SINE Alu -20 292 1 1908 217 33 7 chr17 36829054 36829473 -52675080 + MER63B DNA MER1_type 7 436 0 277 336 94 66 chr17 36830849 36831135 -52673418 - L2 LINE L2 0 3272 2979 330 194 38 198 chr17 36831268 36831556 -52672997 - L2 LINE L2 -1215 2099 1858 231 293 98 30 chr17 36831609 36831742 -52672811 + MIR SINE MIR 51 192 -70 472 324 138 39 chr17 36831824 36832259 -52672294 - L2 LINE L2 -1471 1843 1366 1790 112 31 42 chr17 36832298 36832584 -52671969 - AluJo SINE Alu -29 283 1 34 24 0 0 chr17 36833428 36833469 -52671084 + AT_rich Low_complexity Low_complexity 1 41 0 1039 116 14 0 chr17 36833619 36833819 -52670734 + AluSg/x SINE Alu 139 340 0 1821 166 3 7 chr17 36834446 36834736 -52669817 + AluJb SINE Alu 1 289 -23 234 143 0 0 chr17 36834739 36834788 -52669765 + (TA)n Simple_repeat Simple_repeat 2 50 0 374 308 60 41 chr17 36834788 36835106 -52669447 + L1ME LINE L1 87 410 -5660 847 118 25 0 chr17 36835148 36835267 -52669286 + AluJb SINE Alu 1 122 -190 728 51 0 10 chr17 36835267 36835365 -52669188 + (GGAA)n Simple_repeat Simple_repeat 3 99 0 349 321 54 40 chr17 36835607 36835831 -52668722 + L1ME LINE L1 533 759 -5311 747 261 64 44 chr17 36836021 36836474 -52668079 + L1ME LINE L1 4835 5296 -784 344 265 144 50 chr17 36836572 36836753 -52667800 + L1ME LINE L1 5401 5595 -460 351 306 91 29 chr17 36839190 36839465 -52665088 - L1M4 LINE L1 -2742 3404 3113 7349 102 22 11 chr17 36839649 36840644 -52663909 + LTR13 LTR ERVK 2 1007 0 2148 114 3 19 chr17 36840679 36840995 -52663558 - AluSq SINE Alu -2 311 1 797 174 101 7 chr17 36841025 36841174 -52663379 + MLT1A1 LTR MaLR 1 163 -202 3980 165 77 58 chr17 36841175 36842261 -52662292 + MER52C LTR ERV1 23 1278 0 990 178 41 25 chr17 36842265 36842462 -52662091 + MLT1A1 LTR MaLR 166 365 0 1428 215 53 6 chr17 36843662 36844020 -52660533 - L1 LINE L1 -2593 3553 3179 4066 182 43 12 chr17 36844028 36845058 -52659495 - L1P4 LINE L1 -679 5487 4427 180 0 0 0 chr17 36845422 36845442 -52659111 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 2351 62 0 3 chr17 36846759 36847047 -52657506 + AluY SINE Alu 4 290 -21 2377 76 0 0 chr17 36847617 36847919 -52656634 + AluSx SINE Alu 1 302 -10 1335 191 11 15 chr17 36848108 36848381 -52656172 + AluJb SINE Alu 9 280 -32 355 277 66 24 chr17 36848406 36848572 -52655981 + L1M4 LINE L1 3751 3923 -2223 330 308 10 0 chr17 36848572 36848676 -52655877 - MLT1I LTR MaLR -232 177 73 21 0 0 0 chr17 36850224 36850245 -52654308 + AT_rich Low_complexity Low_complexity 1 21 0 223 281 18 0 chr17 36851713 36851770 -52652783 + L2 LINE L2 3252 3309 -4 218 140 0 20 chr17 36852709 36852759 -52651794 + (TTTTTG)n Simple_repeat Simple_repeat 5 53 0 346 286 43 49 chr17 36853206 36853391 -52651162 + L1M4 LINE L1 3968 4151 -1995 230 254 75 0 chr17 36853458 36853525 -52651028 + L1M4 LINE L1 4787 4858 -1288 460 146 104 116 chr17 36853645 36853702 -52650851 - MER96B DNA MER1_type? -238 179 123 1435 167 29 7 chr17 36853702 36854029 -52650524 - AluJb SINE Alu 0 333 1 460 146 104 116 chr17 36854029 36854134 -52650419 - MER96B DNA MER1_type? -294 123 18 409 254 16 16 chr17 36854147 36854273 -52650280 + L1MA10 LINE L1 6202 6327 -7 423 0 0 0 chr17 36854730 36854777 -52649776 + (CA)n Simple_repeat Simple_repeat 2 48 0 722 211 20 7 chr17 36855033 36855185 -52649368 + FRAM SINE Alu 2 155 -11 329 246 18 53 chr17 36855300 36855414 -52649139 + C-rich Low_complexity Low_complexity 1 110 0 775 92 100 8 chr17 36855815 36855935 -52648618 + AluJ SINE Alu 2 132 -180 2158 108 0 0 chr17 36855938 36856245 -52648308 + AluSq SINE Alu 1 307 -6 30 0 0 0 chr17 36856245 36856275 -52648278 + AT_rich Low_complexity Low_complexity 1 30 0 335 195 23 58 chr17 36856276 36856363 -52648190 + AluJ SINE Alu 119 202 -100 891 107 8 0 chr17 36856732 36856854 -52647699 + FLAM_C SINE Alu 1 123 -10 22 35 0 0 chr17 36856896 36856925 -52647628 + GC_rich Low_complexity Low_complexity 1 29 0 442 274 64 25 chr17 36858324 36858519 -52646034 - L1ME LINE L1 -461 5660 5477 1906 186 50 48 chr17 36859148 36859277 -52645276 + LTR2B LTR ERV1 32 159 -331 2177 108 0 0 chr17 36859277 36859572 -52644981 + AluY SINE Alu 1 295 -16 1906 186 50 48 chr17 36859572 36859900 -52644653 + LTR2B LTR ERV1 159 490 0 11733 111 52 16 chr17 36859900 36861752 -52642801 + Harlequin LTR ERV1 1 1920 -4976 3623 63 6 13 chr17 36861853 36862327 -52642226 + HERVL-A1 LTR ERVL 5184 5654 0 1732 86 40 7 chr17 36862327 36862674 -52641879 + MLT2A1 LTR ERVL 1 400 -44 24 32 0 0 chr17 36862689 36862720 -52641833 + AT_rich Low_complexity Low_complexity 1 31 0 10306 184 8 9 chr17 36862771 36864770 -52639783 - L1P LINE L1 -3170 2976 981 192 40 0 0 chr17 36866493 36866518 -52638035 + (CCCCCG)n Simple_repeat Simple_repeat 3 27 0 1167 229 34 12 chr17 36866734 36867057 -52637496 - L1MDa LINE L1 -3162 3378 3049 1011 213 29 0 chr17 36867093 36867300 -52637253 - AluJo SINE Alu -22 290 78 4505 215 62 20 chr17 36867304 36867585 -52636968 - L1MDa LINE L1 -3547 2993 2725 1961 140 3 10 chr17 36867585 36867893 -52636660 - AluSx SINE Alu -6 306 1 4505 215 62 20 chr17 36867893 36868923 -52635630 - L1MDa LINE L1 -3815 2725 1623 256 173 0 19 chr17 36869130 36869182 -52635371 + MER107 DNA MER1_type 68 118 -79 2279 160 46 0 chr17 36869200 36869593 -52634960 + LTR57 LTR ERVL 1 411 0 2366 145 56 12 chr17 36869637 36870051 -52634502 - MSTB1 LTR MaLR 0 432 1 3082 92 5 2 chr17 36870096 36870521 -52634032 - L1PA14 LINE L1 -1 6160 5735 7294 196 67 48 chr17 36870551 36870692 -52633861 + HERVL74 LTR ERVL 1031 1168 -4517 2067 116 0 25 chr17 36870692 36871011 -52633542 - AluSx SINE Alu -1 311 1 7294 196 67 48 chr17 36871011 36871815 -52632738 + HERVL74 LTR ERVL 1168 1955 -3730 2554 140 27 13 chr17 36871815 36872264 -52632289 - L1MC1 LINE L1 0 6333 5879 7294 196 67 48 chr17 36872264 36873500 -52631053 + HERVL74 LTR ERVL 1955 3340 -2345 667 217 53 13 chr17 36873489 36873641 -52630912 + HERVL74 LTR ERVL 3486 3643 -2042 * 198 0 0 0 chr17 36873643 36873665 -52630888 + (CAAG)n Simple_repeat Simple_repeat 2 23 0 748 171 11 102 chr17 36873665 36873729 -52630824 + HERVL74 LTR ERVL 3914 3982 -1703 1693 195 0 3 chr17 36873729 36874042 -52630511 - AluJb SINE Alu 0 312 1 748 171 11 102 chr17 36874042 36874153 -52630400 + HERVL74 LTR ERVL 3982 4073 -1612 368 309 10 0 chr17 36874144 36874241 -52630312 + HERVL74 LTR ERVL 4589 4686 -999 * 1918 224 72 46 chr17 36874249 36874569 -52629984 + HERVL74 LTR ERVL 4644 4987 -698 1660 172 14 3 chr17 36874569 36874865 -52629688 + AluJo SINE Alu 1 299 -13 1918 224 72 46 chr17 36874865 36875110 -52629443 + HERVL74 LTR ERVL 4987 5224 -461 396 45 45 0 chr17 36875121 36875188 -52629365 + (TA)n Simple_repeat Simple_repeat 2 71 0 714 274 17 26 chr17 36875191 36875421 -52629132 + HERVL74 LTR ERVL 5376 5603 -82 348 151 0 0 chr17 36875475 36875528 -52629025 + MER74B LTR ERVL 1 53 -569 1140 264 30 35 chr17 36875587 36875955 -52628598 + MER74B LTR ERVL 251 616 -6 1231 141 5 15 chr17 36876332 36876538 -52628015 + AluSg/x SINE Alu 75 278 -32 13312 95 19 68 chr17 36876538 36879045 -52625508 + L1PA10 LINE L1 3359 5696 -472 2260 95 0 0 chr17 36879045 36879340 -52625213 + AluSq SINE Alu 6 300 -13 13312 95 19 68 chr17 36879340 36879769 -52624784 + L1PA10 LINE L1 5696 6144 -24 566 182 0 0 chr17 36879869 36879957 -52624596 - AluS SINE Alu -224 89 2 435 171 0 0 chr17 36879966 36880048 -52624505 - L1MB8 LINE L1 -211 5967 5886 2144 212 29 46 chr17 36880048 36880301 -52624252 + L1M4 LINE L1 2533 2789 -3357 2096 116 10 3 chr17 36880301 36880603 -52623950 + AluSx SINE Alu 3 306 -6 2265 88 10 0 chr17 36880603 36880898 -52623655 + AluSx SINE Alu 1 299 -13 2144 212 29 46 chr17 36880898 36881257 -52623296 + L1M4 LINE L1 2787 3136 -3010 406 276 69 35 chr17 36881261 36881377 -52623176 + MIR3 SINE MIR 82 201 -7 208 337 0 10 chr17 36881378 36881479 -52623074 + (TG)n Simple_repeat Simple_repeat 2 101 0 213 254 18 0 chr17 36882440 36882455 -52622098 + GA-rich Low_complexity Low_complexity 2 15 -42 1769 149 7 16 chr17 36882455 36882764 -52621789 + AluJo SINE Alu 1 306 -6 213 254 18 0 chr17 36882764 36882803 -52621750 + GA-rich Low_complexity Low_complexity 15 57 0 1827 153 6 13 chr17 36882875 36883156 -52621397 + AluSx SINE Alu 1 281 -31 243 0 0 0 chr17 36883156 36883183 -52621370 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1827 153 6 13 chr17 36883183 36883215 -52621338 + AluSx SINE Alu 281 312 0 400 288 40 62 chr17 36883677 36883870 -52620683 + MIR SINE MIR 39 226 -36 777 165 47 0 chr17 36883950 36884077 -52620476 - FLAM_C SINE Alu 0 133 1 2288 88 0 7 chr17 36884306 36884613 -52619940 + AluSq SINE Alu 1 305 -8 417 179 71 62 chr17 36884751 36884863 -52619690 - MIR SINE MIR -92 170 58 2204 78 0 0 chr17 36884917 36885200 -52619353 + AluY SINE Alu 1 283 -28 551 222 104 7 chr17 36885209 36885344 -52619209 - MIR3 SINE MIR -51 157 10 183 276 122 73 chr17 36885910 36886033 -52618520 - MIR3 SINE MIR -78 130 2 2017 103 0 3 chr17 36886367 36886649 -52617904 - AluSq SINE Alu -16 297 17 476 268 56 86 chr17 36887376 36887538 -52617015 - MIR SINE MIR -14 248 92 2369 75 0 0 chr17 36887538 36887844 -52616709 + AluY SINE Alu 1 306 -5 476 268 56 86 chr17 36887844 36887879 -52616674 - MIR SINE MIR -170 92 57 2322 84 0 13 chr17 36888309 36888620 -52615933 + AluY SINE Alu 1 307 -4 882 160 17 40 chr17 36888632 36888869 -52615684 + FAM SINE Alu 1 101 0 384 251 310 11 chr17 36889183 36889454 -52615099 + L2 LINE L2 2157 2508 -806 596 319 91 21 chr17 36889503 36889788 -52614765 + L2 LINE L2 2828 3132 -181 2148 120 0 0 chr17 36889800 36890109 -52614444 - AluSx SINE Alu -1 311 3 2088 99 7 3 chr17 36890296 36890614 -52613939 + AluSq SINE Alu 1 319 0 654 238 149 47 chr17 36890798 36891012 -52613541 - MIR SINE MIR -1 261 26 426 270 92 13 chr17 36891061 36891213 -52613340 - MIR SINE MIR -94 168 5 1615 128 8 0 chr17 36892183 36892432 -52612121 - L1MB7 LINE L1 -9 6175 5925 1828 108 74 0 chr17 36892628 36892897 -52611656 - AluSg SINE Alu -21 289 1 322 239 174 9 chr17 36893414 36893523 -52611030 + MIR3 SINE MIR 10 136 -72 1929 128 7 13 chr17 36893761 36894059 -52610494 - AluSx SINE Alu -16 296 1 486 90 0 0 chr17 36894095 36894162 -52610391 - MER53 DNA DNA -2 187 121 2172 99 0 13 chr17 36894188 36894490 -52610063 + AluSx SINE Alu 1 298 -14 2305 70 0 3 chr17 36894492 36894790 -52609763 + AluY SINE Alu 3 299 -12 431 294 149 5 chr17 36894923 36895117 -52609436 - MIR SINE MIR -11 251 30 220 271 73 62 chr17 36897561 36897657 -52606896 + MIR SINE MIR 71 167 -95 420 104 0 0 chr17 36898907 36898974 -52605579 + (TA)n Simple_repeat Simple_repeat 2 68 0 30 0 0 0 chr17 36898989 36899019 -52605534 + AT_rich Low_complexity Low_complexity 1 30 0 302 193 110 18 chr17 36899019 36899128 -52605425 - L1ME3A LINE L1 -6 6164 6046 2469 69 3 0 chr17 36899194 36899498 -52605055 - AluY SINE Alu -6 305 1 584 265 28 62 chr17 36899502 36899554 -52604999 - MIR SINE MIR -10 252 200 1788 151 0 10 chr17 36899554 36899881 -52604672 - AluJo SINE Alu 0 312 1 584 265 28 62 chr17 36899881 36899895 -52604658 - MIR SINE MIR -62 200 187 288 77 0 0 chr17 36899895 36899934 -52604619 + (CA)n Simple_repeat Simple_repeat 2 40 0 584 265 28 62 chr17 36899934 36900077 -52604476 - MIR SINE MIR -75 187 49 363 242 77 65 chr17 36901152 36901310 -52603243 + MIR SINE MIR 21 179 -63 505 227 258 0 chr17 36901362 36901525 -52603028 - MIR SINE MIR -2 260 56 2105 128 7 0 chr17 36901821 36902119 -52602434 - AluSx SINE Alu -12 300 1 235 220 0 0 chr17 36902912 36902962 -52601591 - MIR SINE MIR -72 136 87 183 80 0 0 chr17 36903357 36903382 -52601171 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 341 310 71 0 chr17 36903387 36903500 -52601053 - L2 LINE L2 -22 3291 3171 228 226 0 0 chr17 36906542 36906595 -52597958 + CT-rich Low_complexity Low_complexity 2 54 0 2057 117 0 0 chr17 36906710 36907034 -52597519 - AluSx SINE Alu 0 324 1 1460 194 7 36 chr17 36907065 36907369 -52597184 + AluJb SINE Alu 3 297 -15 750 144 0 50 chr17 36907369 36907497 -52597056 - FLAM_C SINE Alu -178 124 2 2406 54 10 0 chr17 36907509 36907805 -52596748 - AluY SINE Alu -12 299 1 257 325 12 0 chr17 36908071 36908154 -52596399 - MER91A DNA MER1_type -110 86 3 2305 100 3 0 chr17 36908359 36908670 -52595883 + AluSp SINE Alu 1 312 -1 248 328 255 12 chr17 36908800 36909047 -52595506 - L2 LINE L2 -451 2863 2557 968 181 12 0 chr17 36909070 36909236 -52595317 + AluJb SINE Alu 136 303 -9 2199 106 0 22 chr17 36909238 36909549 -52595004 + AluSx SINE Alu 1 304 -8 373 269 43 57 chr17 36909945 36910086 -52594467 + MIR SINE MIR 21 159 -103 1741 247 108 11 chr17 36910656 36910952 -52593601 - LTR40a LTR ERVL 0 519 158 2003 108 7 0 chr17 36910952 36911229 -52593324 - AluY SINE Alu -32 279 1 1741 247 108 11 chr17 36911229 36911405 -52593148 - LTR40a LTR ERVL -361 158 1 2017 136 0 0 chr17 36911915 36912235 -52592318 - AluSx SINE Alu 0 324 5 992 192 0 6 chr17 36912698 36912865 -52591688 + FAM SINE Alu 1 166 -9 482 274 70 5 chr17 36913092 36913387 -52591166 - MLT1L LTR MaLR -112 399 131 310 91 0 0 chr17 36913456 36913541 -52591012 - AluSq SINE Alu 0 324 240 1361 116 16 0 chr17 36913544 36913733 -52590820 - AluSq SINE Alu -121 192 1 2225 110 10 0 chr17 36913881 36914190 -52590363 + AluSx SINE Alu 1 312 0 338 266 83 53 chr17 36914291 36914460 -52590093 + MLT1J LTR MaLR 336 509 -2 910 162 5 81 chr17 36914679 36914749 -52589804 + MER20 DNA MER1_type 26 100 -119 2205 110 3 3 chr17 36914749 36915057 -52589496 + AluSx SINE Alu 1 308 -4 910 162 5 81 chr17 36915057 36915196 -52589357 + MER20 DNA MER1_type 100 219 0 524 262 76 6 chr17 36915205 36915377 -52589176 + L2 LINE L2 2509 2692 -622 645 85 0 0 chr17 36915396 36915478 -52589075 - AluY SINE Alu -228 82 1 471 212 0 44 chr17 36915482 36915619 -52588934 + L2 LINE L2 2725 2855 -459 854 199 93 42 chr17 36915646 36915862 -52588691 - AluJo SINE Alu 0 312 86 941 259 81 19 chr17 36915862 36916043 -52588510 + L2 LINE L2 2950 3118 -195 2012 101 29 0 chr17 36916043 36916365 -52588188 - AluSq SINE Alu 0 330 1 941 259 81 19 chr17 36916365 36916502 -52588051 + L2 LINE L2 3118 3289 -24 1459 121 128 24 chr17 36916505 36916754 -52587799 - AluJb SINE Alu -17 295 21 465 220 53 8 chr17 36916976 36917108 -52587445 - MIR SINE MIR -44 218 81 322 299 83 123 chr17 36918397 36918518 -52586035 - L2 LINE L2 -4 3268 3144 1914 112 94 3 chr17 36918518 36918804 -52585749 + AluSx SINE Alu 1 312 0 322 299 83 123 chr17 36918804 36918966 -52585587 - L2 LINE L2 -128 3144 2977 2082 114 3 3 chr17 36918966 36919263 -52585290 - AluSx SINE Alu -15 297 1 322 299 83 123 chr17 36919263 36919459 -52585094 - L2 LINE L2 -295 2977 2807 652 273 120 5 chr17 36919649 36919865 -52584688 - MIR SINE MIR 0 262 22 186 347 56 0 chr17 36920668 36920740 -52583813 + MIR SINE MIR 48 123 -85 888 283 9 22 chr17 36920831 36921061 -52583492 + MIR SINE MIR 7 233 -29 184 339 18 0 chr17 36922263 36922319 -52582234 - MIR SINE MIR -62 146 90 374 292 30 48 chr17 36923778 36923946 -52580607 - MIR3 SINE MIR -36 172 8 211 182 0 0 chr17 36925660 36925693 -52578860 + polypurine Low_complexity Low_complexity 2 34 0 1490 167 104 19 chr17 36926147 36926314 -52578239 - AluJb SINE Alu -6 296 96 180 0 0 0 chr17 36926314 36926334 -52578219 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1490 167 104 19 chr17 36926334 36926436 -52578117 - AluJb SINE Alu -206 96 4 215 219 172 0 chr17 36927562 36927626 -52576927 - MIR SINE MIR -86 122 48 492 280 147 7 chr17 36929717 36929933 -52574620 - MIR SINE MIR -32 230 2 208 262 16 33 chr17 36930539 36930600 -52573953 - L2 LINE L2 -5 3267 3208 * 255 329 39 78 chr17 36930596 36930879 -52573674 + L2 LINE L2 2980 3251 -21 288 344 55 27 chr17 36931398 36931581 -52572972 + L3b LINE CR1 1274 1461 -122 1449 244 35 73 chr17 36932388 36932730 -52571823 + L1MC4a LINE L1 5276 5081 -1065 2020 134 7 3 chr17 36932730 36933029 -52571524 - AluJb SINE Alu -12 300 1 1449 244 35 73 chr17 36933029 36933342 -52571211 + L1MC4a LINE L1 5080 5403 -743 813 179 8 0 chr17 36933343 36933477 -52571076 + AluJo SINE Alu 2 136 -176 2291 89 3 13 chr17 36933595 36933909 -52570644 + AluSx SINE Alu 1 311 -1 388 380 33 40 chr17 36934764 36935064 -52569489 + L2 LINE L2 2970 3267 -5 224 371 0 0 chr17 36935640 36935729 -52568824 + L2 LINE L2 2890 2978 -294 251 273 83 25 chr17 36936029 36936150 -52568403 - MER20B DNA MER1_type -620 163 36 246 279 250 0 chr17 36936194 36936330 -52568223 - MIR SINE MIR -9 253 84 1788 109 36 0 chr17 36936389 36936636 -52567917 - AluSq SINE Alu -57 256 1 257 226 107 12 chr17 36936668 36936752 -52567801 + L2 LINE L2 3169 3260 -12 190 333 42 42 chr17 36936762 36936882 -52567671 + MIR SINE MIR 46 165 -97 343 296 50 11 chr17 36937191 36937369 -52567184 + MIR SINE MIR 6 262 0 305 239 5 69 chr17 36938576 36938764 -52565789 + C-rich Low_complexity Low_complexity 5 180 0 24 67 0 0 chr17 36938825 36938870 -52565683 + GC_rich Low_complexity Low_complexity 1 45 0 339 277 84 39 chr17 36939548 36939703 -52564850 - MIR SINE MIR -4 258 97 2232 100 0 7 chr17 36940155 36940465 -52564088 - AluSc SINE Alu -1 308 1 566 279 95 18 chr17 36940723 36940945 -52563608 + MIR SINE MIR 8 246 -16 1260 164 60 4 chr17 36941347 36941579 -52562974 + AluJb SINE Alu 6 250 -62 529 171 171 51 chr17 36943089 36943247 -52561306 - MER5B DNA MER1_type 0 178 2 275 335 146 0 chr17 36945901 36946059 -52558494 + MIR3 SINE MIR 27 207 -1 2161 115 0 10 chr17 36948395 36948690 -52555863 - AluSx SINE Alu -20 292 1 917 118 7 29 chr17 36949927 36950063 -52554490 + FLAM_C SINE Alu 1 133 0 264 30 0 0 chr17 36950074 36950107 -52554446 + (TA)n Simple_repeat Simple_repeat 2 34 0 804 180 0 0 chr17 36950811 36950933 -52553620 - FLAM_C SINE Alu -19 124 3 1575 234 82 57 chr17 36951006 36951605 -52552948 + L1MD2 LINE L1 5743 6356 -3 259 377 9 18 chr17 36951675 36951789 -52552764 + MIR SINE MIR 35 147 -61 180 111 0 0 chr17 36951854 36951881 -52552672 + (A)n Simple_repeat Simple_repeat 1 27 0 809 156 0 25 chr17 36951951 36952073 -52552480 - FLAM_A SINE Alu -14 128 10 414 0 0 0 chr17 36952290 36952336 -52552217 + (CA)n Simple_repeat Simple_repeat 1 46 0 189 394 95 7 chr17 36954477 36954614 -52549939 + L2 LINE L2 3096 3244 -28 203 147 0 0 chr17 36955327 36955361 -52549192 + (TC)n Simple_repeat Simple_repeat 2 35 0 211 225 0 0 chr17 36955901 36955941 -52548612 + CT-rich Low_complexity Low_complexity 1 40 0 850 177 14 7 chr17 36955941 36956088 -52548465 - AluJ SINE Alu -32 280 133 507 230 93 14 chr17 36957825 36957964 -52546589 + MER103 DNA DNA 1 150 -16 2526 71 0 3 chr17 36957993 36958302 -52546251 - AluY SINE Alu -3 308 1 2268 67 0 11 chr17 36958878 36959161 -52545392 + AluY SINE Alu 1 280 -31 864 163 23 0 chr17 36959731 36959860 -52544693 - AluJ SINE Alu -170 132 1 232 255 96 53 chr17 36960671 36960765 -52543788 + MIR SINE MIR 99 196 -66 314 343 31 1 chr17 36960950 36961091 -52543462 - MIR SINE MIR -70 138 30 350 345 27 0 chr17 36961793 36961903 -52542650 - MIR SINE MIR -98 164 52 23 0 0 0 chr17 36961966 36961989 -52542564 + AT_rich Low_complexity Low_complexity 1 23 0 2092 120 7 0 chr17 36962900 36963191 -52541362 + AluSx SINE Alu 5 297 -15 2155 83 7 4 chr17 36963198 36963514 -52541039 + AluSc SINE Alu 1 317 0 2172 89 13 40 chr17 36963697 36964000 -52540553 + AluSq SINE Alu 1 295 -18 418 245 50 29 chr17 36964117 36964256 -52540297 + MER5B DNA MER1_type 2 143 -35 429 235 30 3 chr17 36964602 36964769 -52539784 + MIR SINE MIR 11 232 -30 2020 123 0 63 chr17 36964807 36965125 -52539428 + AluSx SINE Alu 1 298 -14 214 357 34 60 chr17 36965486 36965597 -52538956 + L2 LINE L2 2831 2943 -329 2464 80 0 0 chr17 36965597 36965898 -52538655 - AluSg SINE Alu -9 301 1 214 357 34 60 chr17 36965898 36966021 -52538532 + L2 LINE L2 2943 3059 -213 401 232 26 103 chr17 36966685 36966810 -52537743 + L2 LINE L2 2232 2338 -976 5432 90 4 23 chr17 36966810 36967366 -52537187 - L1PA13 LINE L1 -11 6152 5612 2510 41 24 0 chr17 36967366 36967658 -52536895 - AluY SINE Alu -12 299 1 5432 90 4 23 chr17 36967658 36967837 -52536716 - L1PA13 LINE L1 -551 5612 5431 401 232 26 103 chr17 36967837 36967905 -52536648 + L2 LINE L2 2338 2410 -904 1232 249 67 72 chr17 36967925 36968667 -52535886 + L2 LINE L2 2587 3308 -5 1407 160 13 75 chr17 36968727 36969033 -52535520 + AluJo SINE Alu 1 287 -25 615 201 94 7 chr17 36969387 36969536 -52535017 - MER112 DNA MER1_type -96 164 3 1599 153 3 103 chr17 36970524 36970865 -52533688 - AluJo SINE Alu -3 309 3 1514 171 17 35 chr17 36972035 36972322 -52532231 + AluJb SINE Alu 1 282 -30 201 39 0 0 chr17 36972325 36972351 -52532202 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2194 92 11 0 chr17 36972685 36972967 -52531586 - AluSx SINE Alu -26 286 2 576 245 34 62 chr17 36973693 36973901 -52530652 - L2 LINE L2 0 3313 3112 1734 111 96 11 chr17 36973958 36974238 -52530315 + AluSx SINE Alu 1 304 -8 494 130 90 0 chr17 36974238 36974353 -52530200 - L1MA4 LINE L1 -235 6065 5939 466 308 75 54 chr17 36974353 36974604 -52529949 - L2 LINE L2 -292 3021 2771 2123 127 0 22 chr17 36975739 36976055 -52528498 - AluSx SINE Alu -3 309 1 1685 165 0 54 chr17 36976088 36976404 -52528149 + AluJo SINE Alu 1 299 -13 1898 129 0 21 chr17 36977332 36977611 -52526942 + AluSq SINE Alu 6 278 -35 251 298 107 60 chr17 36977688 36977856 -52526697 + L3 LINE CR1 1391 1566 -11 287 296 70 58 chr17 36979767 36979939 -52524614 + HAL1 LINE L1 1 174 -2333 673 232 167 66 chr17 36979949 36980345 -52524208 + HAL1 LINE L1 256 691 -1816 * 1152 235 47 10 chr17 36980343 36980772 -52523781 + L1M4b LINE L1 1608 2191 -4947 * 1221 165 102 78 chr17 36980764 36980796 -52523757 + L1MC5 LINE L1 7476 7506 -489 856 196 130 5 chr17 36980796 36980980 -52523573 + MER3 DNA MER1_type 3 209 0 1221 165 102 78 chr17 36980980 36981186 -52523367 + L1MC5 LINE L1 7506 7706 -289 1988 105 61 0 chr17 36981186 36981463 -52523090 + AluSx SINE Alu 1 294 -18 1221 165 102 78 chr17 36981463 36981661 -52522892 + L1MC5 LINE L1 7706 7984 -11 1906 156 0 23 chr17 36981662 36981964 -52522589 - AluSx SINE Alu -14 298 4 1701 229 255 54 chr17 36981983 36982798 -52521755 + HAL1 LINE L1 1140 1790 -717 1819 164 3 20 chr17 36982798 36983096 -52521457 + AluJo SINE Alu 1 293 -19 1701 229 255 54 chr17 36983096 36983229 -52521324 + HAL1 LINE L1 1790 1895 -612 1787 157 23 26 chr17 36983229 36983534 -52521019 + AluJo SINE Alu 1 304 -8 1701 229 255 54 chr17 36983534 36983651 -52520902 + HAL1 LINE L1 1895 1987 -520 2454 54 0 41 chr17 36983651 36983966 -52520587 - AluY SINE Alu -9 302 1 1701 229 255 54 chr17 36983966 36984030 -52520523 + HAL1 LINE L1 1987 2499 -8 2228 107 3 3 chr17 36984586 36984886 -52519667 + AluSq SINE Alu 1 300 -13 945 283 85 48 chr17 36986318 36986897 -52517656 - L1MEd LINE L1 -5269 850 251 2122 117 0 0 chr17 36987471 36987778 -52516775 + AluSx SINE Alu 1 307 0 2573 74 0 3 chr17 36988005 36988314 -52516239 + AluSq SINE Alu 1 308 -5 1573 198 0 18 chr17 36988374 36988657 -52515896 - AluSx SINE Alu -15 297 20 1281 206 29 39 chr17 36988946 36989257 -52515296 + AluJo SINE Alu 1 308 -4 2017 130 23 10 chr17 36989654 36989962 -52514591 + AluSx SINE Alu 1 312 0 1460 140 34 93 chr17 36989973 36990295 -52514258 + AluJb SINE Alu 1 303 -9 1975 69 91 22 chr17 36990446 36990721 -52513832 + AluSq SINE Alu 6 299 -14 198 0 0 0 chr17 36991667 36991689 -52512864 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3937 202 81 11 chr17 36991844 36992489 -52512064 + L1ME1 LINE L1 3685 4425 -1721 2082 134 0 3 chr17 36992489 36992788 -52511765 + AluSq SINE Alu 2 299 -14 3937 202 81 11 chr17 36992788 36993135 -52511418 + L1ME1 LINE L1 4425 4746 -1400 1300 217 115 38 chr17 36993153 36993359 -52511194 + L1ME1 LINE L1 4957 5146 -1020 1663 214 0 0 chr17 36993359 36993662 -52510891 + AluJo SINE Alu 1 303 -9 1300 217 115 38 chr17 36993662 36994322 -52510231 + L1ME1 LINE L1 5146 5960 -206 763 153 33 159 chr17 36994517 36994818 -52509735 + L1MC5 LINE L1 7403 7665 -296 301 290 75 11 chr17 36994819 36994912 -52509641 + HAL1b LINE L1 93 191 -1157 612 99 0 59 chr17 36994927 36995028 -52509525 + AluSg/x SINE Alu 213 307 -2 453 246 90 8 chr17 36995613 36995735 -52508818 + L2 LINE L2 3182 3313 0 2064 126 3 7 chr17 36995934 36996227 -52508326 - AluSx SINE Alu -20 292 1 22 0 0 0 chr17 36996697 36996719 -52507834 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr17 36997132 36997162 -52507391 + AT_rich Low_complexity Low_complexity 1 30 0 2019 75 93 11 chr17 36997162 36997441 -52507112 + AluY SINE Alu 1 302 -9 339 239 68 0 chr17 36997561 36997649 -52506904 + L1ME LINE L1 5732 5825 -296 2243 110 7 0 chr17 37001207 37001506 -52503047 + AluSq SINE Alu 1 301 -12 752 97 81 135 chr17 37002127 37002312 -52502241 - MER5B DNA MER1_type -3 175 1 2315 102 3 0 chr17 37002412 37002715 -52501838 + AluSx SINE Alu 1 304 -8 580 184 0 10 chr17 37003697 37003795 -52500758 - AluJ/FLAM SINE Alu -215 97 1 1680 191 7 3 chr17 37005223 37005522 -52499031 + AluJb SINE Alu 1 300 -12 372 242 81 60 chr17 37005863 37006012 -52498541 + L2 LINE L2 3162 3313 0 1114 161 6 0 chr17 37006228 37006396 -52498157 + FRAM SINE Alu 1 165 -11 547 200 122 9 chr17 37006589 37006704 -52497849 + FLAM_C SINE Alu 1 128 -5 374 251 274 22 chr17 37007151 37007330 -52497223 + MIR SINE MIR 6 229 -33 21 0 0 0 chr17 37008095 37008116 -52496437 + AT_rich Low_complexity Low_complexity 1 21 0 349 62 234 0 chr17 37008705 37008769 -52495784 + MADE1 DNA Mariner 2 80 0 356 248 10 30 chr17 37009281 37009382 -52495171 - MER5B DNA MER1_type -5 173 75 2323 99 3 3 chr17 37009865 37010178 -52494375 + AluSq SINE Alu 1 313 0 442 178 71 0 chr17 37010265 37010362 -52494191 + MER5A DNA MER1_type 4 100 -78 685 188 0 16 chr17 37010372 37010500 -52494053 + FLAM_C SINE Alu 7 132 -11 204 125 0 0 chr17 37012353 37012385 -52492168 + (A)n Simple_repeat Simple_repeat 1 32 0 2328 45 42 7 chr17 37013748 37014035 -52490518 - AluY SINE Alu -14 297 1 2741 214 90 12 chr17 37014300 37015414 -52489139 + L1ME3 LINE L1 4886 6106 -56 422 192 50 0 chr17 37015830 37015929 -52488624 + L1M4 LINE L1 3492 3595 -2551 533 243 80 42 chr17 37015982 37016270 -52488283 + L1MC5 LINE L1 7631 7929 -32 1974 146 0 7 chr17 37016288 37016590 -52487963 + AluSx SINE Alu 4 303 -9 1979 150 0 7 chr17 37016873 37017196 -52487357 + AluSx SINE Alu 1 321 0 242 316 105 38 chr17 37017314 37017447 -52487106 + MIR SINE MIR 50 191 -71 1646 150 0 93 chr17 37020266 37020399 -52484154 + AluJb SINE Alu 13 102 -210 2296 115 0 0 chr17 37020399 37020704 -52483849 + AluSx SINE Alu 1 305 -7 1646 150 0 93 chr17 37020704 37020883 -52483670 + AluJb SINE Alu 102 296 -16 2061 128 0 3 chr17 37021079 37021375 -52483178 + AluSq SINE Alu 1 295 -18 344 228 139 0 chr17 37021454 37021555 -52482998 - L2 LINE L2 -1 3271 3157 279 0 0 0 chr17 37021874 37021905 -52482648 + (CA)n Simple_repeat Simple_repeat 1 31 0 2117 139 3 0 chr17 37022069 37022086 -52482467 - AluSx SINE Alu -9 303 288 384 22 0 0 chr17 37022086 37022131 -52482422 + (TATG)n Simple_repeat Simple_repeat 2 46 0 2117 139 3 0 chr17 37022131 37022415 -52482138 - AluSx SINE Alu -24 288 1 1139 156 0 0 chr17 37022594 37022761 -52481792 + AluSg/x SINE Alu 136 302 -8 198 103 0 0 chr17 37023119 37023148 -52481405 + (TATATG)n Simple_repeat Simple_repeat 4 32 0 1924 148 17 10 chr17 37023765 37024062 -52480491 + AluSx SINE Alu 1 299 -13 473 320 0 47 chr17 37024525 37024697 -52479856 - MER5A DNA MER1_type 0 189 26 2232 99 3 0 chr17 37024773 37025081 -52479472 - AluSp SINE Alu 0 309 1 225 36 0 0 chr17 37025416 37025444 -52479109 + U6 snRNA snRNA 1 28 -79 2057 153 7 0 chr17 37025589 37025896 -52478657 - AluJb SINE Alu -2 310 2 2044 125 0 24 chr17 37025964 37026260 -52478293 + AluSx SINE Alu 1 289 -23 415 240 273 26 chr17 37026423 37026577 -52477976 + MIR SINE MIR 3 194 -68 244 178 0 0 chr17 37027327 37027372 -52477181 + MER97b DNA MER1_type? 535 579 -474 1124 65 59 24 chr17 37027400 37027570 -52476983 - MER30 DNA MER1_type -54 176 1 1576 176 40 18 chr17 37029051 37029358 -52475195 - AluJo SINE Alu 0 313 1 866 213 11 5 chr17 37029880 37030068 -52474485 + MER5A DNA MER1_type 1 189 0 2269 116 7 3 chr17 37030111 37030421 -52474132 + AluSq SINE Alu 1 311 -2 2281 117 0 0 chr17 37030432 37030732 -52473821 + AluSx SINE Alu 1 300 -12 1681 159 3 43 chr17 37031288 37031590 -52472963 - AluJo SINE Alu -11 301 12 2513 59 0 3 chr17 37031837 37032142 -52472411 - AluY SINE Alu -7 304 1 21 0 0 0 chr17 37032213 37032234 -52472319 + AT_rich Low_complexity Low_complexity 1 21 0 731 196 0 0 chr17 37032510 37032643 -52471910 + FLAM_A SINE Alu 1 133 0 2206 102 10 3 chr17 37032663 37032958 -52471595 + AluSx SINE Alu 1 297 -15 2139 103 25 0 chr17 37033169 37033450 -52471103 + AluSx SINE Alu 1 288 -24 1940 153 27 0 chr17 37034660 37034961 -52469592 + AluSq SINE Alu 1 309 -4 1997 122 0 21 chr17 37034961 37035282 -52469271 + AluSg1 SINE Alu 1 315 0 2040 104 0 11 chr17 37035294 37035572 -52468981 + AluSx SINE Alu 1 275 -37 732 264 101 44 chr17 37036209 37036501 -52468052 + L1MC5 LINE L1 7246 7520 -441 2270 88 0 0 chr17 37036501 37036784 -52467769 - AluSx SINE Alu -29 283 1 732 264 101 44 chr17 37036784 37037142 -52467411 + L1MC5 LINE L1 7520 7917 -44 2122 107 7 0 chr17 37037277 37037568 -52466985 - AluSc SINE Alu -16 293 1 35 54 0 0 chr17 37037683 37037739 -52466814 + AT_rich Low_complexity Low_complexity 1 56 0 197 318 0 0 chr17 37037800 37037844 -52466709 + L2 LINE L2 3210 3253 -19 2171 117 0 3 chr17 37038214 37038497 -52466056 + AluSx SINE Alu 1 282 -30 354 288 180 44 chr17 37038545 37038861 -52465692 + L1M4 LINE L1 5039 5397 -749 192 265 88 15 chr17 37040373 37040441 -52464112 - MIR SINE MIR -184 78 6 376 294 114 67 chr17 37040868 37041211 -52463342 + HAL1 LINE L1 712 1070 -1437 * 390 253 224 47 chr17 37041194 37041401 -52463152 + HAL1 LINE L1 1816 2086 -421 2104 123 16 29 chr17 37041401 37041717 -52462836 + AluSx SINE Alu 1 312 0 390 253 224 47 chr17 37041717 37041786 -52462767 + HAL1 LINE L1 2086 2141 -366 1750 168 0 55 chr17 37042020 37042329 -52462224 - AluJb SINE Alu -20 292 1 1891 146 43 9 chr17 37042357 37042686 -52461867 + MER2 DNA MER2_type 1 340 -5 335 279 91 78 chr17 37042693 37042847 -52461706 + HAL1 LINE L1 2352 2507 0 216 0 0 0 chr17 37043379 37043403 -52461150 + (A)n Simple_repeat Simple_repeat 1 24 0 903 195 34 136 chr17 37044792 37045146 -52459407 + L2 LINE L2 2996 3313 0 213 186 23 0 chr17 37045408 37045451 -52459102 + L2 LINE L2 3254 3297 -16 293 317 87 44 chr17 37046709 37046892 -52457661 + MIR SINE MIR 34 224 -38 751 188 41 0 chr17 37046922 37047092 -52457461 + MER104 DNA MER2_type 1 177 -3 1765 131 0 0 chr17 37047131 37047367 -52457186 - AluSx SINE Alu -76 236 1 2353 87 3 3 chr17 37047684 37047983 -52456570 + AluSx SINE Alu 1 299 -13 1700 173 3 24 chr17 37049821 37050116 -52454437 - AluJo SINE Alu -23 289 1 422 192 14 27 chr17 37050205 37050278 -52454275 - AluJo SINE Alu -30 282 211 985 142 25 12 chr17 37050278 37050440 -52454113 - AluJo SINE Alu -138 174 11 2048 145 0 16 chr17 37050563 37050880 -52453673 + AluSx SINE Alu 1 312 0 870 162 0 22 chr17 37051152 37051288 -52453265 - FLAM_C SINE Alu 0 133 1 501 258 31 43 chr17 37051403 37051566 -52452987 - MIR SINE MIR -75 187 27 24 53 0 0 chr17 37053174 37053212 -52451341 + AT_rich Low_complexity Low_complexity 1 38 0 2077 133 0 20 chr17 37053290 37053590 -52450963 + AluSx SINE Alu 2 295 -17 613 321 89 9 chr17 37053606 37053830 -52450723 - MIR SINE MIR -15 247 6 1335 183 52 2 chr17 37053928 37054181 -52450372 + L1MD3 LINE L1 7517 7967 0 2588 48 0 13 chr17 37054181 37054496 -52450057 + AluY SINE Alu 1 311 0 23 92 0 0 chr17 37054936 37055001 -52449552 + AT_rich Low_complexity Low_complexity 1 65 0 615 285 54 18 chr17 37055291 37055512 -52449041 - MIR SINE MIR -14 248 20 1321 165 9 14 chr17 37055521 37055739 -52448814 - MER20 DNA MER1_type 0 219 3 225 0 0 0 chr17 37055968 37055993 -52448560 + (T)n Simple_repeat Simple_repeat 1 25 0 1530 181 49 21 chr17 37056159 37056447 -52448106 + AluJo SINE Alu 1 296 -16 23 0 0 0 chr17 37056448 37056471 -52448082 + AT_rich Low_complexity Low_complexity 1 23 0 302 315 125 5 chr17 37056929 37057113 -52447440 - MIR SINE MIR 0 262 57 186 171 0 0 chr17 37057616 37057657 -52446896 + T-rich Low_complexity Low_complexity 1 41 0 252 0 0 0 chr17 37057740 37057768 -52446785 + (TG)n Simple_repeat Simple_repeat 1 28 0 522 111 0 0 chr17 37057786 37057858 -52446695 - AluS SINE Alu -240 73 2 378 325 79 31 chr17 37057890 37058118 -52446435 + MIR SINE MIR 14 252 -10 651 212 88 7 chr17 37058305 37058442 -52446111 + MER96 DNA MER1_type? 1 148 -27 1622 183 0 50 chr17 37059555 37059724 -52444829 - AluJo SINE Alu -11 301 154 2395 80 0 3 chr17 37059724 37060023 -52444530 - AluY SINE Alu -13 298 1 1622 183 0 50 chr17 37060023 37060170 -52444383 - AluJo SINE Alu -158 154 1 2174 120 3 10 chr17 37060202 37060511 -52444042 + AluSx SINE Alu 1 307 -5 1400 176 34 0 chr17 37060908 37061002 -52443551 + AluJo SINE Alu 35 124 -188 2345 91 0 3 chr17 37061002 37061300 -52443253 + AluY SINE Alu 1 297 -14 1400 176 34 0 chr17 37061300 37061444 -52443109 + AluJo SINE Alu 124 281 -31 192 77 0 0 chr17 37061449 37061475 -52443078 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr17 37061942 37061970 -52442583 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr17 37062854 37062874 -52441679 + (A)n Simple_repeat Simple_repeat 1 20 0 2304 101 3 0 chr17 37063444 37063742 -52440811 + AluSq SINE Alu 1 299 -14 558 248 59 62 chr17 37063795 37064102 -52440451 + L1MC5 LINE L1 7623 7928 -33 2143 132 0 0 chr17 37064110 37064406 -52440147 + AluSx SINE Alu 2 297 -15 2417 92 0 13 chr17 37065099 37065439 -52439114 + AluSp SINE Alu 1 336 0 1423 171 84 31 chr17 37065444 37065731 -52438822 + AluJb SINE Alu 1 302 -10 254 162 0 0 chr17 37065803 37065840 -52438713 - Alu SINE Alu -264 38 2 2112 124 0 0 chr17 37065877 37066167 -52438386 - AluSx SINE Alu -16 296 7 1837 166 0 3 chr17 37066240 37066541 -52438012 + AluJb SINE Alu 1 300 -12 28 0 0 0 chr17 37066545 37066573 -52437980 + AT_rich Low_complexity Low_complexity 1 28 0 672 191 73 59 chr17 37066884 37067088 -52437465 - L1MC5 LINE L1 -1045 6916 6710 1934 149 29 0 chr17 37067874 37068189 -52436364 + MER33 DNA MER1_type 1 324 0 1772 83 4 0 chr17 37068642 37068870 -52435683 + AluSp SINE Alu 71 299 -14 407 269 11 11 chr17 37068963 37069056 -52435497 + MER58 DNA MER1_type 1 93 -293 1019 156 0 11 chr17 37069081 37069325 -52435228 + AluSx SINE Alu 2 304 -6 1133 148 56 84 chr17 37069328 37069612 -52434941 + MER58 DNA MER1_type 2144 2419 -1 5793 153 90 74 chr17 37069784 37070267 -52434286 - Charlie1a DNA MER1_type -1307 1454 980 2205 120 0 7 chr17 37070267 37070576 -52433977 + AluSx SINE Alu 3 309 -3 5793 153 90 74 chr17 37070576 37070713 -52433840 - Charlie1a DNA MER1_type -1781 980 847 2150 127 0 19 chr17 37070713 37071027 -52433526 - AluSx SINE Alu -4 308 1 5793 153 90 74 chr17 37071027 37071813 -52432740 - Charlie1a DNA MER1_type -1914 847 24 23 54 0 0 chr17 37072520 37072557 -52431996 + AT_rich Low_complexity Low_complexity 1 37 0 246 231 92 0 chr17 37072835 37072900 -52431653 - MIR SINE MIR -101 107 37 523 314 35 6 chr17 37072907 37073079 -52431474 + MER5B DNA MER1_type 1 177 -1 737 202 27 90 chr17 37075034 37075079 -52429474 + MER5B DNA MER1_type 1 47 -131 1931 162 0 16 chr17 37075079 37075387 -52429166 - AluJb SINE Alu -9 303 1 737 202 27 90 chr17 37075387 37075529 -52429024 + MER5B DNA MER1_type 47 176 -2 1803 93 31 4 chr17 37077204 37077462 -52427091 - L1MA3 LINE L1 0 6305 6041 2088 114 7 0 chr17 37077811 37078112 -52426441 + AluSx SINE Alu 1 303 0 909 176 26 0 chr17 37078137 37078290 -52426263 + FRAM SINE Alu 3 159 -17 26 30 0 0 chr17 37078290 37078323 -52426230 + AT_rich Low_complexity Low_complexity 1 33 0 1198 129 0 0 chr17 37079179 37079350 -52425203 + AluJo SINE Alu 1 171 -141 555 210 0 0 chr17 37079352 37079452 -52425101 - AluSp SINE Alu -82 231 132 1930 138 14 0 chr17 37079455 37079744 -52424809 - AluSq SINE Alu -5 308 16 602 174 37 0 chr17 37080174 37080283 -52424270 + L1MB5 LINE L1 6062 6174 0 2508 44 24 0 chr17 37080434 37080730 -52423823 + AluY SINE Alu 1 303 -8 904 136 0 0 chr17 37082210 37082350 -52422203 + FLAM_C SINE Alu 1 140 -3 207 186 0 0 chr17 37083222 37083265 -52421288 + G-rich Low_complexity Low_complexity 1 43 0 318 283 203 0 chr17 37083774 37083912 -52420641 + MIR SINE MIR 49 214 -48 521 171 246 42 chr17 37084290 37084407 -52420146 + L1ME4a LINE L1 5819 5911 -210 2098 135 3 0 chr17 37084407 37084710 -52419843 + AluSx SINE Alu 1 304 -8 521 171 246 42 chr17 37084710 37084832 -52419721 + L1ME4a LINE L1 5911 6107 -14 254 288 0 0 chr17 37085184 37085243 -52419310 - L2 LINE L2 -673 2641 2583 280 271 250 32 chr17 37085244 37085387 -52419166 - MIR SINE MIR -3 259 148 1852 66 0 13 chr17 37085387 37085615 -52418938 + AluY SINE Alu 1 225 -86 267 79 0 0 chr17 37085615 37085653 -52418900 + (CA)n Simple_repeat Simple_repeat 1 38 0 280 271 250 32 chr17 37085653 37085696 -52418857 - MIR SINE MIR -113 149 31 298 295 214 34 chr17 37085710 37086066 -52418487 - L2 LINE L2 -864 2450 2031 333 344 119 4 chr17 37086194 37086439 -52418114 - L2 LINE L2 -1328 1986 1710 1905 151 10 0 chr17 37086439 37086731 -52417822 - AluJb SINE Alu -17 295 1 219 248 133 29 chr17 37086764 37086869 -52417684 + L2 LINE L2 2160 2275 -1039 968 187 13 7 chr17 37086942 37087091 -52417462 + FRAM SINE Alu 1 151 -10 366 23 0 0 chr17 37087091 37087134 -52417419 + (GA)n Simple_repeat Simple_repeat 2 44 0 2254 128 0 0 chr17 37087210 37087560 -52416993 + AluSx SINE Alu 1 350 0 397 228 65 41 chr17 37087662 37087785 -52416768 + MIR SINE MIR 110 235 -27 433 269 59 43 chr17 37087837 37087946 -52416607 + L2 LINE L2 2432 2547 -767 2242 85 37 0 chr17 37087946 37088240 -52416313 + AluSg1 SINE Alu 1 305 -4 433 269 59 43 chr17 37088240 37088316 -52416237 + L2 LINE L2 2547 2620 -694 231 128 13 154 chr17 37088362 37088409 -52416144 - L1ME3A LINE L1 -2 6168 6135 2146 120 3 7 chr17 37088409 37088717 -52415836 + AluSx SINE Alu 1 307 -5 231 128 13 154 chr17 37088717 37088747 -52415806 - L1ME3A LINE L1 -35 6135 6102 602 274 106 75 chr17 37088764 37088803 -52415750 + L2 LINE L2 2677 2713 -600 2256 90 17 0 chr17 37088803 37089093 -52415460 + AluSq SINE Alu 1 295 -18 426 53 0 0 chr17 37089093 37089150 -52415403 + (TA)n Simple_repeat Simple_repeat 1 57 0 602 274 106 75 chr17 37089150 37089494 -52415059 + L2 LINE L2 2712 3069 -244 2107 119 0 32 chr17 37089531 37089843 -52414710 - AluSg SINE Alu -8 302 1 2103 107 3 3 chr17 37089848 37090138 -52414415 - AluSp SINE Alu -5 308 19 432 184 20 20 chr17 37090414 37090512 -52414041 + LTR67 LTR ERVL 458 555 -2 730 231 74 44 chr17 37093550 37093779 -52410774 - MIR SINE MIR -14 248 13 2264 120 0 0 chr17 37096112 37096421 -52408132 - AluSx SINE Alu -3 309 1 2011 157 0 3 chr17 37096890 37097196 -52407357 - AluJb SINE Alu -7 305 1 1528 151 48 19 chr17 37097221 37097492 -52407061 - AluJo SINE Alu -20 292 14 1482 165 102 18 chr17 37097542 37097827 -52406726 - AluJo SINE Alu -3 309 1 1898 81 119 8 chr17 37097836 37098097 -52406456 - AluSg1 SINE Alu -19 290 1 287 300 67 25 chr17 37098226 37098346 -52406207 - MIR3 SINE MIR -76 132 8 2075 107 0 4 chr17 37098503 37098774 -52405779 - AluSg SINE Alu -40 270 1 1059 170 0 0 chr17 37098776 37098941 -52405612 - AluSg/x SINE Alu -20 292 128 2032 102 0 59 chr17 37099257 37099560 -52404993 + AluSq SINE Alu 1 317 0 219 31 0 31 chr17 37099560 37099592 -52404961 + (TAAA)n Simple_repeat Simple_repeat 2 108 0 419 283 105 27 chr17 37099996 37100215 -52404338 - L1M4 LINE L1 -2936 3210 2975 988 132 0 22 chr17 37100632 37100814 -52403739 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1757 88 0 4 chr17 37100827 37101054 -52403499 - AluSc SINE Alu -11 298 73 180 0 0 0 chr17 37101054 37101074 -52403479 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr17 37101255 37101283 -52403270 + AT_rich Low_complexity Low_complexity 1 28 0 348 115 16 0 chr17 37101283 37101344 -52403209 - L1PB1 LINE L1 0 6151 6090 32723 97 9 8 chr17 37101346 37106943 -52397610 - L1PA7 LINE L1 -11 7581 1148 292 308 0 0 chr17 37106966 37107057 -52397496 + HsTC2 DNA Tc2 36 126 -1772 1939 153 3 0 chr17 37107244 37107538 -52397015 - AluJb SINE Alu -17 295 1 260 319 88 0 chr17 37107921 37108012 -52396541 - MIR SINE MIR -62 200 102 1711 35 5 10 chr17 37109064 37109265 -52395288 - L1PA4 LINE L1 -5 6150 5951 1389 184 26 71 chr17 37109304 37109614 -52394939 - AluJb SINE Alu -16 296 1 1906 181 70 5 chr17 37109739 37110138 -52394415 - L1MC3 LINE L1 -7 7778 7354 1101 199 61 64 chr17 37110138 37110434 -52394119 - MER49 LTR ERV1 0 923 627 2115 115 3 7 chr17 37110434 37110729 -52393824 - AluSx SINE Alu -18 294 1 1101 199 61 64 chr17 37110729 37110774 -52393779 - MER49 LTR ERV1 -296 627 583 3835 158 5 2 chr17 37110775 37111384 -52393169 - MER49 LTR ERV1 -304 619 9 1667 204 89 33 chr17 37111393 37111820 -52392733 - L1MC3 LINE L1 -429 7356 6906 7843 84 10 9 chr17 37111822 37112625 -52391928 - L1PA8 LINE L1 0 6172 5371 2162 121 3 0 chr17 37112625 37112922 -52391631 - AluSx SINE Alu -14 298 1 7843 84 10 9 chr17 37112922 37113965 -52390588 - L1PA8 LINE L1 -801 5371 4316 628 119 129 0 chr17 37113965 37114066 -52390487 - L1MD3 LINE L1 -1168 6827 6714 1159 229 35 3 chr17 37114130 37114444 -52390109 + MER33 DNA MER1_type 1 324 0 1155 174 27 49 chr17 37114509 37114733 -52389820 + MER20 DNA MER1_type 1 219 0 2396 84 7 3 chr17 37115250 37115558 -52388995 + AluSq SINE Alu 1 309 -4 894 176 6 6 chr17 37115560 37115736 -52388817 + AluSg/x SINE Alu 135 310 0 208 198 12 99 chr17 37117080 37117161 -52387392 + MIR3 SINE MIR 110 183 -25 185 271 0 51 chr17 37117846 37117905 -52386648 + MIR SINE MIR 58 113 -95 2405 78 0 7 chr17 37118526 37118833 -52385720 + AluY SINE Alu 1 305 -6 1062 41 0 0 chr17 37118919 37119042 -52385511 + AluY SINE Alu 181 303 -8 192 40 0 0 chr17 37119172 37119197 -52385356 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1106 165 147 27 chr17 37119411 37119581 -52384972 - AluJo SINE Alu 0 315 106 348 24 0 0 chr17 37119581 37119622 -52384931 + (TG)n Simple_repeat Simple_repeat 2 42 0 1106 165 147 27 chr17 37119622 37119708 -52384845 - AluJo SINE Alu -209 106 32 2748 183 60 1 chr17 37120448 37120995 -52383558 - L1MB7 LINE L1 -19 6165 5581 2412 68 0 3 chr17 37121196 37121490 -52383063 + AluY SINE Alu 1 293 -18 24 53 0 0 chr17 37121497 37121535 -52383018 + AT_rich Low_complexity Low_complexity 1 38 0 2190 92 0 7 chr17 37122546 37122828 -52381725 + AluY SINE Alu 1 280 -31 2216 177 94 24 chr17 37122828 37123286 -52381267 - LTR2B LTR ERV1 0 490 1 39170 89 14 13 chr17 37123286 37129010 -52375543 - Harlequin LTR ERV1 0 6896 1169 1450 179 0 0 chr17 37129122 37129368 -52375185 + AluJb SINE Alu 66 311 -1 1300 100 12 0 chr17 37129828 37129998 -52374555 - AluSg/x SINE Alu -15 295 124 2487 72 0 0 chr17 37129998 37130304 -52374249 - AluY SINE Alu -5 306 1 288 180 250 50 chr17 37130385 37130485 -52374068 - MIR3 SINE MIR -15 193 74 206 121 0 0 chr17 37130626 37130659 -52373894 + (T)n Simple_repeat Simple_repeat 1 33 0 190 0 67 0 chr17 37130961 37130991 -52373562 + (TA)n Simple_repeat Simple_repeat 2 33 0 257 186 52 0 chr17 37131008 37131105 -52373448 + (TA)n Simple_repeat Simple_repeat 2 103 0 995 187 25 102 chr17 37131296 37131455 -52373098 - MER20 DNA MER1_type 0 219 82 2146 114 7 3 chr17 37131455 37131752 -52372801 + AluSx SINE Alu 1 298 -14 995 187 25 102 chr17 37131752 37131827 -52372726 - MER20 DNA MER1_type -137 82 3 323 311 0 0 chr17 37132699 37132789 -52371764 + L1MC4 LINE L1 6614 6703 -1339 2883 37 0 0 chr17 37132801 37133127 -52371426 - LTR17 LTR ERV1 -454 326 1 7918 42 1 32 chr17 37133130 37134107 -52370446 - HERV17 LTR ERV1 -4 8622 7676 180 77 0 0 chr17 37134820 37134846 -52369707 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2262 98 0 0 chr17 37134846 37135131 -52369422 - AluSx SINE Alu -27 285 1 269 313 72 49 chr17 37135206 37135421 -52369132 - L2 LINE L2 -274 2998 2768 265 125 0 0 chr17 37138032 37138072 -52366481 - HSMAR1 DNA Mariner -1247 40 1 322 145 24 121 chr17 37139263 37139346 -52365207 + HAL1 LINE L1 2427 2501 -6 623 251 11 38 chr17 37139450 37139591 -52364962 + MER5B DNA MER1_type 1 137 -41 1697 169 0 36 chr17 37139591 37139892 -52364661 + AluJo SINE Alu 1 290 -22 623 251 11 38 chr17 37139892 37139933 -52364620 + MER5B DNA MER1_type 137 178 0 510 264 21 36 chr17 37139971 37140111 -52364442 + L2 LINE L2 3127 3264 -8 2355 100 3 0 chr17 37140567 37140866 -52363687 + AluSp SINE Alu 1 300 -13 256 214 180 11 chr17 37141070 37141159 -52363394 + MLT1J2 LTR MaLR 41 144 -405 300 227 76 33 chr17 37141330 37141456 -52363097 + MLT1J2 LTR MaLR 339 450 0 196 286 71 20 chr17 37142341 37142439 -52362114 - MIR SINE MIR -4 258 156 668 290 11 72 chr17 37142464 37142656 -52361897 + MIR SINE MIR 17 219 -43 1590 201 0 10 chr17 37142656 37142964 -52361589 + AluJb SINE Alu 1 305 -7 668 290 11 72 chr17 37142964 37142975 -52361578 + MIR SINE MIR 219 229 -33 2151 112 0 7 chr17 37142975 37143290 -52361263 + AluSx SINE Alu 3 315 0 668 290 11 72 chr17 37143290 37143346 -52361207 + MIR SINE MIR 229 262 0 430 264 18 86 chr17 37143341 37143396 -52361157 - MIR SINE MIR -110 152 95 * 1386 209 35 39 chr17 37143396 37143679 -52360874 + AluJo SINE Alu 1 282 -30 258 105 0 0 chr17 37143682 37143720 -52360833 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 430 264 18 86 chr17 37143720 37143823 -52360730 - MIR SINE MIR -169 93 1 204 40 0 0 chr17 37144489 37144514 -52360039 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 1627 245 113 22 chr17 37144693 37144761 -52359792 + MER34 LTR ERV1 1 61 -481 1459 126 36 5 chr17 37144761 37144983 -52359570 + L1PB2 LINE L1 5918 6146 -5 1627 245 113 22 chr17 37144983 37145408 -52359145 + MER34 LTR ERV1 61 539 -3 713 229 133 30 chr17 37145713 37145984 -52358569 + MER34-int LTR ERV1 311 609 -5722 1893 148 3 3 chr17 37145984 37146349 -52358204 - AluSx SINE Alu 0 366 2 302 145 105 66 chr17 37146352 37146428 -52358125 + MER34-int LTR ERV1 1417 1495 -4836 609 189 87 32 chr17 37146570 37146755 -52357798 + MER31-int LTR ERV1 995 1189 -3747 317 267 11 11 chr17 37146772 37146862 -52357691 + MER5B DNA MER1_type 86 175 -3 1536 203 0 13 chr17 37148200 37148501 -52356052 - AluJb SINE Alu -15 297 1 1891 155 16 7 chr17 37148557 37148861 -52355692 - AluJb SINE Alu -1 311 5 1798 159 14 10 chr17 37149276 37149396 -52355157 + AluJo SINE Alu 1 119 -193 324 0 0 0 chr17 37149396 37149432 -52355121 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2086 139 0 0 chr17 37149439 37149740 -52354813 + AluSx SINE Alu 1 301 -11 1798 159 14 10 chr17 37149740 37149906 -52354647 + AluJo SINE Alu 124 296 -16 2159 98 26 20 chr17 37149906 37150211 -52354342 + AluSp SINE Alu 1 307 -6 418 255 292 16 chr17 37150227 37150419 -52354134 + MIR SINE MIR 15 259 -3 714 307 85 70 chr17 37150797 37151020 -52353533 + L2 LINE L2 2509 2727 -545 2250 88 0 7 chr17 37151020 37151315 -52353238 - AluSc SINE Alu -16 293 1 2037 121 32 0 chr17 37151315 37151596 -52352957 - AluSx SINE Alu -22 290 1 714 307 85 70 chr17 37151596 37152075 -52352478 + L2 LINE L2 2726 3270 -2 1774 168 33 3 chr17 37152482 37152785 -52351768 - AluSq SINE Alu -1 312 1 2133 102 20 7 chr17 37152938 37153231 -52351322 - AluSx SINE Alu -15 297 1 9819 66 5 2 chr17 37153347 37154563 -52349990 - HERVL-A1 LTR ERVL -317 5337 4119 8622 62 10 0 chr17 37154566 37155628 -52348925 - HERVL-A1 LTR ERVL -4581 1073 1 3358 84 18 11 chr17 37155628 37156069 -52348484 - MLT2A1 LTR ERVL 0 444 1 1315 246 134 0 chr17 37156070 37156384 -52348169 + L1ME1 LINE L1 5682 6065 -101 273 29 0 0 chr17 37156384 37156418 -52348135 + (TG)n Simple_repeat Simple_repeat 1 34 0 1315 246 134 0 chr17 37156418 37156513 -52348040 + L1ME1 LINE L1 6065 6146 -20 1959 141 0 17 chr17 37156797 37157094 -52347459 - AluJb SINE Alu -20 292 1 305 283 69 0 chr17 37157188 37157333 -52347220 - L1M4 LINE L1 -1197 4949 4795 236 250 31 10 chr17 37157418 37157514 -52347039 - L1M4 LINE L1 -1492 4654 4557 863 98 0 0 chr17 37157521 37157633 -52346920 - AluSq SINE Alu -17 296 185 519 62 0 0 chr17 37157633 37157697 -52346856 - AluSq SINE Alu -215 98 35 21 0 0 0 chr17 37157749 37157770 -52346783 + AT_rich Low_complexity Low_complexity 1 21 0 495 254 166 16 chr17 37157865 37158058 -52346495 + LTR50 LTR ERVL 574 795 0 351 278 39 53 chr17 37158137 37158418 -52346135 + L1M4 LINE L1 4101 4377 -1769 1565 236 40 69 chr17 37158445 37158836 -52345717 - L1MEc LINE L1 -4279 2117 1717 2321 67 0 3 chr17 37158836 37159119 -52345434 + AluSq SINE Alu 1 282 -31 251 28 28 0 chr17 37159122 37159158 -52345395 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1565 236 40 69 chr17 37159158 37159330 -52345223 - L1MEc LINE L1 -4681 1715 1566 320 250 83 88 chr17 37159419 37159635 -52344918 + L1ME4a LINE L1 5833 6047 -74 1345 138 46 72 chr17 37160264 37160449 -52344104 - AluJb SINE Alu -15 297 122 279 0 0 0 chr17 37160449 37160480 -52344073 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1345 138 46 72 chr17 37160480 37160599 -52343954 - AluJb SINE Alu -190 122 1 1132 178 158 0 chr17 37161341 37161460 -52343093 + AluJo SINE Alu 1 100 -212 254 50 25 0 chr17 37161460 37161500 -52343053 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1132 178 158 0 chr17 37161500 37161621 -52342932 + AluJo SINE Alu 100 279 -33 271 23 45 23 chr17 37161623 37161667 -52342886 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 316 335 93 6 chr17 37162890 37163072 -52341481 - MIR SINE MIR -14 248 51 280 313 93 70 chr17 37163151 37163365 -52341188 + L2 LINE L2 1881 2099 -1215 282 335 112 58 chr17 37163496 37163774 -52340779 + L2 LINE L2 2980 3272 0 329 344 17 28 chr17 37165901 37166081 -52338472 - MER5B DNA MER1_type 0 178 1 2322 67 0 0 chr17 37166782 37167096 -52337457 + AluY SINE Alu 1 314 0 996 249 98 30 chr17 37169015 37169384 -52335169 - L1MEc LINE L1 -5649 556 163 2220 113 10 0 chr17 37169748 37170050 -52334503 + AluSx SINE Alu 1 305 -7 1133 180 86 112 chr17 37170188 37170572 -52333981 + MLT1B LTR MaLR 1 374 -16 27 29 0 0 chr17 37171119 37171153 -52333400 + AT_rich Low_complexity Low_complexity 1 34 0 916 173 12 23 chr17 37171397 37171570 -52332983 - FRAM SINE Alu -10 166 1 388 169 102 36 chr17 37171679 37171791 -52332762 - L1MC3 LINE L1 -1 7778 6254 21 0 0 0 chr17 37172063 37172084 -52332469 + AT_rich Low_complexity Low_complexity 1 21 0 1049 206 61 16 chr17 37172087 37172334 -52332219 + AluJo SINE Alu 42 299 -13 2367 200 67 21 chr17 37172442 37173021 -52331532 - L1MC4 LINE L1 -139 7903 7298 189 0 0 0 chr17 37173022 37173043 -52331510 + (TG)n Simple_repeat Simple_repeat 1 21 0 262 288 89 14 chr17 37173110 37173256 -52331297 + L1M4 LINE L1 2750 2906 -3240 603 254 40 42 chr17 37173279 37173574 -52330979 + L1M4 LINE L1 3547 3830 -2316 799 204 17 17 chr17 37173582 37173758 -52330795 + AluJo SINE Alu 120 295 -17 681 235 16 22 chr17 37173758 37173941 -52330612 + L1M4 LINE L1 3844 4025 -2121 1301 167 23 0 chr17 37173947 37174062 -52330491 + AluJo SINE Alu 7 118 -194 204 40 0 0 chr17 37174062 37174087 -52330466 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1301 167 23 0 chr17 37174087 37174192 -52330361 + AluJo SINE Alu 118 232 -80 1227 152 116 83 chr17 37174620 37174922 -52329631 - AluJb SINE Alu 0 312 1 2069 122 0 25 chr17 37174930 37174995 -52329558 - AluSq SINE Alu 0 584 519 1017 88 6 28 chr17 37174995 37175177 -52329376 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 2069 122 0 25 chr17 37175177 37175522 -52329031 - AluSq SINE Alu -65 519 1 3398 97 95 6 chr17 37176825 37177339 -52327214 + MER51A LTR ERV1 75 634 0 1122 86 34 46 chr17 37177339 37177514 -52327039 + MER51A-int LTR ERV1 1 173 -7643 * 4452 168 9 21 chr17 37177511 37178302 -52326251 + MER51A-int LTR ERV1 334 1114 -6702 1991 91 115 3 chr17 37178301 37178597 -52325956 + MER57-int LTR ERV1 5610 5938 -1599 * 3872 117 46 5 chr17 37178595 37179160 -52325393 + MER57-int LTR ERV1 6560 7147 -390 549 114 80 0 chr17 37179163 37179251 -52325302 + LTR54B LTR ERV1 5 99 -399 605 78 22 22 chr17 37179251 37179341 -52325212 + MER57-int LTR ERV1 7265 7354 -183 248 289 41 21 chr17 37181293 37181390 -52323163 + L1ME4a LINE L1 5552 5650 -471 340 206 119 24 chr17 37181754 37181880 -52322673 + L1ME4a LINE L1 5706 5843 -278 279 318 0 0 chr17 37182174 37182237 -52322316 + L1M4 LINE L1 1 63 -6078 715 265 109 32 chr17 37182579 37183032 -52321521 + L1M4 LINE L1 55 766 -5446 * 5635 140 20 37 chr17 37183027 37184241 -52320312 + L1MA8 LINE L1 4926 6112 -179 1520 214 0 30 chr17 37184241 37184544 -52320009 - AluJo SINE Alu -18 294 1 5635 140 20 37 chr17 37184544 37184721 -52319832 + L1MA8 LINE L1 6112 6291 0 240 193 0 46 chr17 37184721 37184786 -52319767 + L1M4 LINE L1 751 805 -5303 214 124 103 69 chr17 37185025 37185170 -52319383 + (CTTAA)n Simple_repeat Simple_repeat 1 150 0 1980 188 48 11 chr17 37185496 37185848 -52318705 - MLT1A1 LTR MaLR 0 365 1 2351 72 0 10 chr17 37187710 37188015 -52316538 + AluSc SINE Alu 1 302 -7 2331 74 0 3 chr17 37188291 37188619 -52315934 - AluSx SINE Alu 0 328 2 327 321 0 37 chr17 37189469 37189631 -52314922 - MLT1K LTR MaLR -13 575 420 1114 263 45 42 chr17 37189661 37190413 -52314140 - L1ME LINE L1 -413 5691 4943 1396 167 31 0 chr17 37190433 37190661 -52313892 + AluSx SINE Alu 49 283 -29 237 108 0 0 chr17 37190667 37190704 -52313849 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 2347 134 15 50 chr17 37190859 37191262 -52313291 - Tigger2a DNA MER2_type -45 389 1 2017 280 86 35 chr17 37191331 37192012 -52312541 - L1ME LINE L1 -1389 4691 3921 695 59 0 0 chr17 37192012 37192097 -52312456 + L1PA6 LINE L1 6068 6152 -2 2017 280 86 35 chr17 37192097 37192616 -52311937 - L1ME LINE L1 -2159 3921 3430 836 262 16 0 chr17 37192618 37192801 -52311752 - AluJb SINE Alu -21 291 106 6086 163 13 3 chr17 37193038 37194961 -52309592 - L1PB2 LINE L1 -2 6149 4207 5431 165 29 14 chr17 37194951 37195772 -52308781 - L1 LINE L1 -1519 4627 3786 * 2256 113 0 3 chr17 37195772 37196081 -52308472 - AluSq SINE Alu -5 308 1 5431 165 29 14 chr17 37196081 37196298 -52308255 - L1 LINE L1 -2360 3786 3574 259 289 76 41 chr17 37196290 37196605 -52307948 - L1ME LINE L1 -5032 1229 904 * 313 289 128 34 chr17 37196671 37196937 -52307616 - L1ME LINE L1 -5251 819 529 333 320 24 24 chr17 37197450 37197575 -52306978 - L1ME LINE L1 -5940 130 6 24 0 0 0 chr17 37197585 37197609 -52306944 + AT_rich Low_complexity Low_complexity 1 24 0 737 244 69 20 chr17 37199056 37199302 -52305251 + HAL1b LINE L1 403 660 -688 255 54 0 0 chr17 37199863 37199900 -52304653 - MER74B LTR ERVL -585 37 1 839 283 9 9 chr17 37199955 37200185 -52304368 - HERVL74 LTR ERVL -80 5605 5376 793 224 127 16 chr17 37200199 37200444 -52304109 - HERVL74 LTR ERVL -452 5233 4962 1464 204 7 0 chr17 37200445 37200724 -52303829 - AluJo SINE Alu -4 308 28 831 192 34 0 chr17 37200582 37200728 -52303825 - AluJo SINE Alu -141 171 21 * 2495 202 63 30 chr17 37200724 37201115 -52303438 - HERVL74 LTR ERVL -4001 1684 1267 2279 94 0 0 chr17 37201115 37201401 -52303152 - AluSq SINE Alu -23 290 5 2495 202 63 30 chr17 37201401 37201629 -52302924 - HERVL74 LTR ERVL -4418 1267 1048 1661 167 20 36 chr17 37203866 37204171 -52300382 + AluJb SINE Alu 1 300 -12 1965 184 70 27 chr17 37205313 37205753 -52298800 + LTR2B LTR ERV1 32 490 0 180 0 0 0 chr17 37205753 37205773 -52298780 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1038 200 32 60 chr17 37205777 37206027 -52298526 - AluJo SINE Alu -30 282 40 4093 177 50 18 chr17 37206360 37207494 -52297059 + L1MC/D LINE L1 1817 2982 -3558 1295 174 5 0 chr17 37207508 37207726 -52296827 + AluJo SINE Alu 87 305 -7 2036 208 43 63 chr17 37207777 37208200 -52296353 + L1MC/D LINE L1 3029 3459 -3081 2875 171 18 37 chr17 37208200 37208715 -52295838 + MLT1D LTR MaLR 1 505 0 2036 208 43 63 chr17 37208715 37208729 -52295824 + L1MC/D LINE L1 3459 3472 -3068 2318 106 6 6 chr17 37208729 37209040 -52295513 + AluSx SINE Alu 1 311 -1 2036 208 43 63 chr17 37209040 37209298 -52295255 + L1MC/D LINE L1 3472 3711 -2829 1232 136 22 5 chr17 37209299 37209601 -52294952 + LTR46 LTR ERV1 1 360 -100 43455 35 25 1 chr17 37209603 37215603 -52288950 - L1PA3 LINE L1 -8 6147 1 790 64 36 9 chr17 37215604 37215714 -52288839 + LTR46 LTR ERV1 348 460 0 1402 236 31 45 chr17 37215805 37216067 -52288486 + L1MC/D LINE L1 3873 4128 -2412 1609 178 45 17 chr17 37216067 37216359 -52288194 - AluJb SINE Alu -12 300 1 1402 236 31 45 chr17 37216359 37216519 -52288034 + L1MC/D LINE L1 4128 4289 -2251 * 2235 183 86 43 chr17 37216500 37216855 -52287698 + L1MC/D LINE L1 5446 5784 -1159 1979 129 0 7 chr17 37216855 37217165 -52287388 - AluSq SINE Alu 0 308 1 2235 183 86 43 chr17 37217165 37217535 -52287018 + L1MC/D LINE L1 5784 6200 -743 7446 152 29 75 chr17 37217540 37219082 -52285471 - MER109 Unknown Unknown -211 2221 751 8569 187 251 23 chr17 37219133 37223933 -52280620 + L1PA14 LINE L1 833 7003 -596 2173 120 7 3 chr17 37223933 37224233 -52280320 + AluSx SINE Alu 1 301 -11 8569 187 251 23 chr17 37224233 37224792 -52279761 + L1PA14 LINE L1 7003 7433 -166 8719 164 51 5 chr17 37224793 37227483 -52277070 + L1PB1 LINE L1 1104 4069 -2793 1895 189 77 34 chr17 37227484 37227924 -52276629 - LTR2B LTR ERV1 0 490 32 2013 204 7 9 chr17 37227941 37228372 -52276181 + L1PB1 LINE L1 4065 4494 -2368 2968 207 2 5 chr17 37228373 37228996 -52275557 - L1 LINE L1 -903 5243 4623 7582 174 10 10 chr17 37228997 37229610 -52274943 + L1PB1 LINE L1 4500 5111 -1756 254 95 24 0 chr17 37229610 37229652 -52274901 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 7582 174 10 10 chr17 37229652 37231056 -52273497 + L1PB1 LINE L1 5111 6519 -348 531 82 0 0 chr17 37231056 37231129 -52273424 + (TA)n Simple_repeat Simple_repeat 1 73 0 7582 174 10 10 chr17 37231129 37231466 -52273087 + L1PB1 LINE L1 6519 6854 -13 568 256 151 4 chr17 37231562 37231800 -52272753 - L1MEc LINE L1 -4280 2116 1844 212 182 45 0 chr17 37233504 37233548 -52271005 + L2 LINE L2 3150 3195 -77 91 19 0 0 chr17 37233834 37233939 -52270614 + AT_rich Low_complexity Low_complexity 1 105 0 21 71 0 0 chr17 37234112 37234154 -52270399 + AT_rich Low_complexity Low_complexity 1 42 0 752 245 37 84 chr17 37234320 37234618 -52269935 - L1MEc LINE L1 -4547 1849 1566 215 158 0 18 chr17 37235675 37235732 -52268821 + GA-rich Low_complexity Low_complexity 4 59 0 210 175 32 32 chr17 37236123 37236186 -52268367 + (GGGTG)n Simple_repeat Simple_repeat 3 65 0 1189 88 0 6 chr17 37236767 37236926 -52267627 - L1MA2 LINE L1 0 6304 6147 216 0 0 0 chr17 37236932 37236956 -52267597 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 11659 142 29 4 chr17 37236956 37239973 -52264580 - L1MA1 LINE L1 -10 7711 4619 8103 162 38 7 chr17 37239964 37241319 -52263234 - L1MA1 LINE L1 -5981 1584 188 * 276 264 0 0 chr17 37241767 37241835 -52262718 - MIR SINE MIR -120 88 21 1783 174 10 7 chr17 37242467 37242765 -52261788 - AluJb SINE Alu -13 299 1 2250 109 0 0 chr17 37243080 37243374 -52261179 - AluSg SINE Alu -14 296 3 2282 104 0 3 chr17 37243380 37243678 -52260875 - AluSx SINE Alu -14 298 2 2432 109 0 0 chr17 37243712 37244024 -52260529 - AluSx SINE Alu 0 312 1 24 0 0 0 chr17 37244125 37244149 -52260404 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr17 37244698 37244729 -52259824 + AT_rich Low_complexity Low_complexity 1 31 0 2022 130 3 7 chr17 37244836 37245135 -52259418 + AluSx SINE Alu 1 298 -14 614 248 163 35 chr17 37245276 37245534 -52259019 + L3 LINE CR1 1286 1576 -1 1711 168 3 49 chr17 37246208 37246535 -52258018 - AluJo SINE Alu 0 312 1 1264 210 54 41 chr17 37246903 37247198 -52257355 + AluJo SINE Alu 2 300 -2 1894 138 39 0 chr17 37248678 37248960 -52255593 - AluSx SINE Alu -19 293 1 1271 190 0 0 chr17 37249154 37249365 -52255188 + AluSx SINE Alu 29 239 -73 2033 131 0 0 chr17 37249496 37249960 -52254593 + AluSq SINE Alu 1 313 0 2107 114 4 0 chr17 37250392 37250692 -52253861 - AluSx SINE Alu 0 301 1 21 57 0 0 chr17 37251147 37251182 -52253371 + AT_rich Low_complexity Low_complexity 1 35 0 2381 75 3 3 chr17 37251525 37251832 -52252721 + AluSg SINE Alu 1 307 -3 220 328 78 62 chr17 37251970 37252098 -52252455 + L2 LINE L2 3141 3270 -2 1188 119 0 6 chr17 37252936 37253113 -52251440 - AluSg/x SINE Alu -4 308 133 423 0 0 0 chr17 37253113 37253160 -52251393 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2146 85 7 0 chr17 37253163 37253444 -52251109 - AluSx SINE Alu -29 283 1 287 239 186 9 chr17 37253448 37253561 -52250992 - L2 LINE L2 -632 2682 2550 187 309 25 12 chr17 37254238 37254319 -52250234 + L2 LINE L2 3009 3090 -182 361 248 190 7 chr17 37254392 37254529 -52250024 + MIR SINE MIR 91 252 -10 1698 121 0 17 chr17 37254591 37254831 -52249722 - AluSx SINE Alu -75 237 2 349 282 92 25 chr17 37254878 37255041 -52249512 + MIR SINE MIR 16 189 -73 2282 105 0 0 chr17 37255178 37255463 -52249090 - AluSx SINE Alu -27 285 1 395 277 61 7 chr17 37255544 37255692 -52248861 - MIR SINE MIR -55 207 52 429 138 0 0 chr17 37256980 37257045 -52247508 - MLT1D LTR MaLR 0 505 441 2465 66 0 16 chr17 37257046 37257350 -52247203 - AluY SINE Alu -12 299 1 2007 113 31 0 chr17 37257375 37257667 -52246886 - L1PA13 LINE L1 -16 6147 5847 245 257 71 0 chr17 37257698 37257768 -52246785 - MLT1D LTR MaLR -62 443 369 1390 135 0 0 chr17 37257770 37257963 -52246590 + AluSx SINE Alu 1 193 -119 1648 110 0 0 chr17 37258063 37258272 -52246281 - AluSx SINE Alu -103 209 1 229 368 0 8 chr17 37258970 37259087 -52245466 + (TATATG)n Simple_repeat Simple_repeat 1 116 0 515 302 13 0 chr17 37259129 37259288 -52245265 + MIR SINE MIR 88 248 -14 282 244 23 23 chr17 37259380 37259466 -52245087 + L1MEc LINE L1 94 179 -6217 714 263 219 51 chr17 37259467 37259859 -52244694 - MLT1G1 LTR MaLR 0 595 138 928 206 0 0 chr17 37260918 37261078 -52243475 - AluJb SINE Alu -16 296 137 832 190 101 0 chr17 37261278 37261457 -52243096 + AluJo SINE Alu 104 300 -12 1603 161 87 3 chr17 37261769 37262055 -52242498 - AluJb SINE Alu -2 310 1 855 184 6 37 chr17 37262872 37263035 -52241518 - FRAM SINE Alu -8 168 11 2372 80 3 0 chr17 37263045 37263347 -52241206 - AluY SINE Alu -8 303 1 1811 155 13 36 chr17 37263480 37263783 -52240770 + AluJo SINE Alu 2 297 -15 275 320 35 2 chr17 37264040 37264170 -52240383 + MIR SINE MIR 39 181 -27 363 340 56 25 chr17 37264188 37264523 -52240030 + L2 LINE L2 2719 3059 -213 2525 53 6 9 chr17 37264803 37265124 -52239429 + L1PA14 LINE L1 5842 6161 0 227 303 76 53 chr17 37265141 37265273 -52239280 + L2 LINE L2 3138 3272 0 677 313 66 44 chr17 37265667 37266294 -52238259 + L2 LINE L2 2353 3063 -209 388 254 204 0 chr17 37266393 37266535 -52238018 + MIR SINE MIR 42 212 -50 233 220 142 134 chr17 37269935 37270020 -52234533 + L1MEc LINE L1 617 700 -5505 2201 86 48 0 chr17 37270020 37270312 -52234241 + AluSp SINE Alu 1 306 -7 233 220 142 134 chr17 37270312 37270551 -52234002 + L1MEc LINE L1 700 935 -5270 1934 133 34 0 chr17 37270551 37270845 -52233708 + AluSx SINE Alu 1 304 -8 233 220 142 134 chr17 37270845 37271060 -52233493 + L1MEc LINE L1 935 1167 -5038 1658 185 7 14 chr17 37271060 37271341 -52233212 + AluJb SINE Alu 4 282 -30 233 220 142 134 chr17 37271341 37271494 -52233059 + L1MEc LINE L1 1167 1317 -4888 216 122 0 0 chr17 37271685 37271726 -52232827 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 634 182 0 41 chr17 37271731 37271852 -52232701 - AluJo SINE Alu -137 175 60 1770 48 0 14 chr17 37271876 37272083 -52232470 - AluY SINE Alu -18 293 90 298 162 118 15 chr17 37272613 37272681 -52231872 - L2 LINE L2 0 3313 3239 2380 79 3 10 chr17 37275262 37275565 -52228988 + AluSp SINE Alu 1 301 -12 199 283 0 17 chr17 37276354 37276414 -52228139 + L2 LINE L2 3242 3300 -13 2530 58 0 22 chr17 37276620 37276931 -52227622 + AluY SINE Alu 1 304 -7 2394 71 0 26 chr17 37278869 37279180 -52225373 + AluY SINE Alu 1 303 -8 956 61 0 0 chr17 37279495 37279610 -52224943 - AluSq/x SINE Alu -197 115 1 247 206 69 59 chr17 37279777 37279879 -52224674 - MIR SINE MIR -70 192 90 526 250 64 27 chr17 37281098 37281286 -52223267 + MIR SINE MIR 53 247 -15 352 298 30 8 chr17 37281298 37281429 -52223124 + MIR SINE MIR 79 212 -50 259 306 32 16 chr17 37281526 37281650 -52222903 + MIR SINE MIR 81 206 -56 1098 198 0 6 chr17 37281829 37282011 -52222542 - AluJb SINE Alu -25 287 107 291 28 0 0 chr17 37282185 37282221 -52222332 + (CA)n Simple_repeat Simple_repeat 2 37 0 183 129 0 0 chr17 37282221 37282252 -52222301 + (TC)n Simple_repeat Simple_repeat 2 32 0 827 140 67 28 chr17 37282254 37282432 -52222121 - MER53 DNA DNA -1 188 4 515 167 135 0 chr17 37282542 37282638 -52221915 - FLAM_A SINE Alu -30 112 4 1069 153 6 11 chr17 37283011 37283188 -52221365 - AluJb SINE Alu 0 312 137 742 151 0 0 chr17 37283254 37283360 -52221193 + FLAM_C SINE Alu 3 108 -35 567 274 11 21 chr17 37284274 37284464 -52220089 - MIR SINE MIR -1 261 74 2106 132 0 7 chr17 37284474 37284770 -52219783 - AluSx SINE Alu -18 294 1 258 272 136 0 chr17 37284868 37284949 -52219604 + MER5A DNA MER1_type 12 103 -86 200 222 111 16 chr17 37285303 37285366 -52219187 + MIR SINE MIR 82 150 -112 345 284 90 8 chr17 37285793 37285927 -52218626 + MIR SINE MIR 20 164 -98 1042 104 0 0 chr17 37285985 37286120 -52218433 + AluSq/x SINE Alu 1 135 -177 2202 88 3 11 chr17 37286121 37286430 -52218123 + AluSp SINE Alu 1 307 0 201 214 0 0 chr17 37287081 37287123 -52217430 - L2 LINE L2 -2 3270 3229 2563 69 0 0 chr17 37287276 37287580 -52216973 + AluY SINE Alu 1 304 -7 3102 225 63 6 chr17 37287582 37288477 -52216076 + L1M4 LINE L1 2294 3239 -2907 2382 43 36 10 chr17 37288838 37289139 -52215414 + AluY SINE Alu 1 309 -2 2148 110 23 10 chr17 37289150 37289281 -52215272 + AluSx SINE Alu 1 129 -183 2166 91 39 3 chr17 37289281 37289567 -52214986 + AluSg1 SINE Alu 1 296 -13 2148 110 23 10 chr17 37289567 37289736 -52214817 + AluSx SINE Alu 129 305 -7 186 250 42 0 chr17 37289736 37289784 -52214769 - L2 LINE L2 -30 3283 3234 335 145 0 0 chr17 37290080 37290150 -52214403 + AluY SINE Alu 8 52 -249 1460 89 0 5 chr17 37290150 37290341 -52214212 + AluY SINE Alu 109 298 -13 2073 131 7 3 chr17 37290412 37290709 -52213844 + AluSq SINE Alu 1 298 -15 490 156 96 78 chr17 37291264 37291431 -52213122 - Charlie5 DNA MER1_type -27 2585 2416 1402 185 11 41 chr17 37291444 37291714 -52212839 + AluJo SINE Alu 5 266 -46 21 0 0 0 chr17 37291763 37291784 -52212769 + AT_rich Low_complexity Low_complexity 1 21 0 805 166 0 10 chr17 37291785 37291936 -52212617 - MER33 DNA MER1_type -259 65 1 38 0 0 0 chr17 37292294 37292332 -52212221 + AT_rich Low_complexity Low_complexity 1 38 0 2543 69 3 0 chr17 37292340 37292645 -52211908 + AluY SINE Alu 1 306 -5 2325 100 0 3 chr17 37292846 37293146 -52211407 + AluSq SINE Alu 1 299 -14 759 181 0 0 chr17 37293157 37293290 -52211263 + FLAM_A SINE Alu 1 133 0 394 253 192 7 chr17 37293734 37293880 -52210673 - MER5A DNA MER1_type -7 182 10 2536 47 0 17 chr17 37294109 37294410 -52210143 + AluY SINE Alu 1 296 -15 2433 67 13 0 chr17 37294789 37295088 -52209465 + AluY SINE Alu 1 303 -8 2085 150 0 0 chr17 37295866 37296160 -52208393 + AluSx SINE Alu 3 296 -16 219 69 0 0 chr17 37297069 37297098 -52207455 + (TA)n Simple_repeat Simple_repeat 2 30 0 21 36 0 0 chr17 37297388 37297416 -52207137 + AT_rich Low_complexity Low_complexity 1 28 0 2221 113 6 0 chr17 37297722 37298033 -52206520 - AluSq SINE Alu 0 313 1 2198 86 14 17 chr17 37299774 37300066 -52204487 - AluSc SINE Alu -18 291 1 1641 165 10 34 chr17 37300155 37300446 -52204107 - AluJo SINE Alu -28 284 1 1812 122 23 8 chr17 37300661 37300924 -52203629 + AluJo SINE Alu 26 292 -20 710 151 0 55 chr17 37301545 37301691 -52202862 - L1PB4 LINE L1 -1 6155 6018 1531 171 13 62 chr17 37301714 37302023 -52202530 + AluJb SINE Alu 1 294 -18 1074 168 53 14 chr17 37302826 37303034 -52201519 - AluJb SINE Alu -95 217 2 1511 219 0 0 chr17 37303034 37303335 -52201218 - AluJo SINE Alu -11 301 1 477 153 10 71 chr17 37303362 37303460 -52201093 - FLAM_A SINE Alu -46 96 5 2089 124 7 0 chr17 37304058 37304365 -52200188 - AluSg SINE Alu 0 310 2 2076 95 3 3 chr17 37304446 37304761 -52199792 - AluSp SINE Alu 0 315 1 1321 164 13 25 chr17 37304920 37305158 -52199395 + MER46A DNA MER2_type 2 236 0 352 390 0 0 chr17 37305870 37306047 -52198506 + (CGG)n Simple_repeat Simple_repeat 2 178 0 281 333 0 0 chr17 37306036 37306210 -52198343 + GA-rich Low_complexity Low_complexity 2 175 0 * 27 73 0 0 chr17 37306549 37306604 -52197949 + AT_rich Low_complexity Low_complexity 1 55 0 1726 171 0 4 chr17 37306610 37306890 -52197663 - AluJo SINE Alu -30 282 4 1593 63 113 0 chr17 37306902 37307124 -52197429 - AluY SINE Alu -64 247 1 842 230 126 4 chr17 37307481 37307711 -52196842 + MIR SINE MIR 3 260 -2 460 243 166 28 chr17 37307727 37307908 -52196645 - MIR SINE MIR -5 257 52 215 197 131 33 chr17 37308718 37308779 -52195774 - MER5A DNA MER1_type -1 188 122 214 254 46 115 chr17 37308773 37308903 -52195650 + MER5A DNA MER1_type 47 167 -22 * 284 318 210 43 chr17 37309288 37309864 -52194689 - L2 LINE L2 -341 2973 2302 721 275 118 17 chr17 37309937 37310224 -52194329 + L2 LINE L2 2092 2407 -907 228 129 0 113 chr17 37310233 37310253 -52194300 - MER5B DNA MER1_type -98 80 59 1931 120 27 3 chr17 37310253 37310545 -52194008 - AluSg SINE Alu -9 301 3 228 129 0 113 chr17 37310545 37310586 -52193967 - MER5B DNA MER1_type -119 59 26 369 271 119 92 chr17 37310598 37310846 -52193707 - L2 LINE L2 -1147 2167 1927 1027 154 109 20 chr17 37310846 37311047 -52193506 - MER20 DNA MER1_type 0 219 1 369 271 119 92 chr17 37311047 37311285 -52193268 - L2 LINE L2 -1387 1927 1668 813 143 22 201 chr17 37311417 37311731 -52192822 - MIR SINE MIR 0 262 5 2340 77 3 3 chr17 37311856 37312166 -52192387 - AluY SINE Alu -1 310 1 342 281 229 15 chr17 37312307 37312717 -52191836 - L2 LINE L2 -2106 1208 711 1867 146 33 0 chr17 37312845 37313146 -52191407 - AluSq SINE Alu -1 312 2 1956 131 10 10 chr17 37313150 37313462 -52191091 - AluSx SINE Alu 0 312 1 211 309 88 60 chr17 37313554 37313771 -52190782 - L2 LINE L2 -2872 442 220 1255 143 72 14 chr17 37314423 37314646 -52189907 - MER46A DNA MER2_type 0 236 1 446 228 91 121 chr17 37314880 37315055 -52189498 - MIR SINE MIR -18 244 76 2475 48 0 0 chr17 37315055 37315349 -52189204 + AluY SINE Alu 1 294 -17 446 228 91 121 chr17 37315349 37315405 -52189148 - MIR SINE MIR -186 76 20 183 208 38 57 chr17 37315868 37315921 -52188632 + MIR3 SINE MIR 9 60 -148 224 242 105 81 chr17 37317480 37317604 -52186949 - MIR SINE MIR -50 212 86 715 283 66 35 chr17 37317925 37318183 -52186370 - L2 LINE L2 -92 3180 2915 242 177 0 97 chr17 37318262 37318324 -52186229 + MER94 DNA DNA 67 122 -12 280 324 182 7 chr17 37318333 37318481 -52186072 - L2 LINE L2 -455 2859 2686 2480 50 0 0 chr17 37318496 37318795 -52185758 + AluY SINE Alu 1 299 -12 2924 239 168 18 chr17 37320146 37321117 -52183436 + L2 LINE L2 486 1602 -1712 2008 82 41 27 chr17 37321133 37321425 -52183128 + AluY SINE Alu 1 296 -15 1484 215 39 66 chr17 37321944 37322213 -52182340 + L2 LINE L2 2884 3138 -175 1755 117 28 74 chr17 37322213 37322538 -52182015 - AluSq SINE Alu -3 310 1 1484 215 39 66 chr17 37322538 37322710 -52181843 + L2 LINE L2 3138 3313 0 320 269 32 0 chr17 37322889 37322982 -52181571 - MIR SINE MIR -38 224 129 521 154 13 0 chr17 37323040 37323118 -52181435 - Tigger5 DNA MER2_type -2244 79 1 369 224 174 10 chr17 37323953 37324051 -52180502 - MIR3 SINE MIR -2 206 93 429 324 79 9 chr17 37324072 37324265 -52180288 + MIR SINE MIR 5 207 -55 296 127 18 0 chr17 37325397 37325452 -52179101 + (CCGAG)n Simple_repeat Simple_repeat 3 58 0 431 240 47 80 chr17 37325884 37326034 -52178519 + MIR SINE MIR 48 192 -70 444 167 204 19 chr17 37326199 37326307 -52178246 - L2 LINE L2 -6 3307 3180 549 159 290 7 chr17 37326634 37326772 -52177781 - MER53 DNA DNA -12 177 1 234 284 95 0 chr17 37326926 37327000 -52177553 - MIR SINE MIR -84 124 44 2008 111 19 38 chr17 37327190 37327334 -52177219 + AluSx SINE Alu 1 146 -166 2086 76 22 51 chr17 37327334 37327649 -52176904 + AluY SINE Alu 1 306 -5 2008 111 19 38 chr17 37327649 37327819 -52176734 + AluSx SINE Alu 146 309 -3 248 222 143 0 chr17 37327865 37327928 -52176625 - L2 LINE L2 0 3313 3242 422 157 0 24 chr17 37327932 37328029 -52176524 + FLAM SINE Alu 44 108 -25 578 188 0 0 chr17 37328029 37328125 -52176428 - MER5A DNA MER1_type -32 157 62 216 0 0 0 chr17 37328130 37328154 -52176399 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1310 146 0 14 chr17 37328156 37328369 -52176184 - AluSx SINE Alu -28 284 75 561 132 0 0 chr17 37378369 37378445 -52126108 - AluSx SINE Alu -235 78 3 432 90 149 0 chr17 37378446 37378513 -52126040 - MER5A DNA MER1_type -112 77 1 418 270 132 20 chr17 37378599 37378803 -52125750 - L2 LINE L2 -192 3080 2854 256 250 53 13 chr17 37379304 37379380 -52125173 + MIR SINE MIR 54 132 -76 225 94 0 0 chr17 37379558 37379590 -52124963 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2183 111 0 0 chr17 37379591 37379871 -52124682 - AluSx SINE Alu -32 280 1 954 103 13 45 chr17 37379979 37380135 -52124418 - L1PA10 LINE L1 0 6168 6018 218 320 47 23 chr17 37380145 37380273 -52124280 + L2 LINE L2 2917 3047 -225 218 275 0 0 chr17 37380395 37380435 -52124118 + L2 LINE L2 3121 3160 -112 805 207 113 43 chr17 37380435 37380735 -52123818 + L1MC4 LINE L1 7719 8039 -3 2555 65 0 3 chr17 37380826 37381136 -52123417 - AluY SINE Alu -2 309 1 628 229 50 22 chr17 37381157 37381336 -52123217 + MIR SINE MIR 79 262 0 1219 126 0 0 chr17 37382109 37382276 -52122277 - AluSg/x SINE Alu -13 299 133 2675 48 0 6 chr17 37382276 37382589 -52121964 - AluY SINE Alu 0 311 1 241 307 27 0 chr17 37383129 37383204 -52121349 - L2 LINE L2 -7 3265 3189 2357 105 0 3 chr17 37383252 37383556 -52120997 - AluSx SINE Alu -9 303 1 2457 78 7 0 chr17 37383558 37383853 -52120700 - AluY SINE Alu -14 297 1 1836 171 10 23 chr17 37384659 37384968 -52119585 - AluJb SINE Alu -7 305 1 2310 99 3 7 chr17 37384973 37385276 -52119277 - AluSq SINE Alu -9 304 3 399 94 0 0 chr17 37385614 37385678 -52118875 - L1MB3 LINE L1 0 6183 6120 242 311 0 22 chr17 37386222 37386312 -52118241 + L2 LINE L2 3226 3313 0 588 243 162 14 chr17 37386395 37386605 -52117948 - MIR SINE MIR 0 262 22 182 313 95 101 chr17 37387216 37387395 -52117158 + L2 LINE L2 3009 3186 -86 1025 174 0 23 chr17 37387595 37387767 -52116786 + AluSg/x SINE Alu 135 302 -8 338 328 109 22 chr17 37387891 37388074 -52116479 + MIR SINE MIR 63 261 -1 2599 68 3 0 chr17 37388369 37388678 -52115875 + AluY SINE Alu 1 310 -1 308 189 200 0 chr17 37389096 37389186 -52115367 - MIR SINE MIR -102 160 53 517 246 108 69 chr17 37389577 37389719 -52114834 + MIR SINE MIR 48 202 -60 2579 52 0 7 chr17 37389719 37390026 -52114527 + AluY SINE Alu 1 305 -6 517 246 108 69 chr17 37390026 37390086 -52114467 + MIR SINE MIR 202 258 -4 286 284 22 17 chr17 37391338 37391446 -52113107 + MIR SINE MIR 54 159 -49 337 211 284 9 chr17 37391499 37391608 -52112945 - MIR SINE MIR -2 260 122 743 277 11 5 chr17 37391655 37391843 -52112710 - MIR3 SINE MIR -7 201 13 1932 107 41 4 chr17 37392047 37392343 -52112210 - AluY SINE Alu 0 306 1 2769 26 0 0 chr17 37392392 37392694 -52111859 + AluY SINE Alu 1 302 -9 397 290 120 26 chr17 37392821 37392986 -52111567 - MIR SINE MIR -60 148 13 2708 39 0 0 chr17 37393029 37393334 -52111219 + AluY SINE Alu 1 305 -6 2312 98 24 0 chr17 37393366 37393663 -52110890 - AluSq SINE Alu -9 304 1 526 297 10 67 chr17 37393922 37394131 -52110422 + MIR SINE MIR 66 262 0 2391 81 0 0 chr17 37394271 37394569 -52109984 - AluY SINE Alu -13 298 1 1660 172 19 45 chr17 37395008 37395170 -52109383 - AluJo SINE Alu -12 300 148 2511 68 0 0 chr17 37395170 37395465 -52109088 - AluY SINE Alu -11 300 6 1660 172 19 45 chr17 37395465 37395610 -52108943 - AluJo SINE Alu -164 148 1 207 305 85 0 chr17 37395802 37395861 -52108692 + MIR SINE MIR 199 262 0 294 273 30 97 chr17 37396057 37396222 -52108331 - L2 LINE L2 -2 3311 3158 230 299 65 26 chr17 37396389 37396466 -52108087 + MIR SINE MIR 5 84 -178 1489 191 55 56 chr17 37396474 37396657 -52107896 - L1MA9 LINE L1 -31 6281 6099 2303 85 10 13 chr17 37396657 37396962 -52107591 + AluSx SINE Alu 1 304 -8 1489 191 55 56 chr17 37396962 37396995 -52107558 - L1MA9 LINE L1 -213 6099 6067 1435 133 94 67 chr17 37396995 37397325 -52107228 + MER44D DNA MER2_type 1 609 0 1489 191 55 56 chr17 37397325 37397532 -52107021 - L1MA9 LINE L1 -245 6067 5858 244 276 17 0 chr17 37397533 37397591 -52106962 + MIR3 SINE MIR 97 155 -53 2080 130 16 0 chr17 37397634 37397941 -52106612 + AluJo SINE Alu 1 312 0 2491 85 0 0 chr17 37397942 37398247 -52106306 + AluSx SINE Alu 1 305 -7 2183 112 0 3 chr17 37398251 37398546 -52106007 + AluSx SINE Alu 7 300 -12 620 174 0 53 chr17 37398556 37398614 -52105939 + 7SK RNA RNA 1 61 -132 3540 108 134 2 chr17 37398614 37399160 -52105393 - LTR35 LTR ERV1 0 618 1 620 174 0 53 chr17 37399160 37399233 -52105320 + 7SK RNA RNA 61 125 -68 3562 165 8 70 chr17 37399246 37399980 -52104573 - LTR8 LTR ERV1 -2 689 1 520 96 0 0 chr17 37400003 37400076 -52104477 + 7SK RNA RNA 121 193 0 22 0 0 0 chr17 37400167 37400189 -52104364 + AT_rich Low_complexity Low_complexity 1 22 0 284 136 34 0 chr17 37401066 37401125 -52103428 + C-rich Low_complexity Low_complexity 3 63 0 807 198 86 0 chr17 37401736 37401898 -52102655 - AluJo SINE Alu -8 304 129 874 181 0 0 chr17 37401939 37402072 -52102481 - AluJo SINE Alu -169 133 1 819 105 0 0 chr17 37402085 37402190 -52102363 - AluSx SINE Alu -14 298 194 1096 107 0 0 chr17 37402191 37402331 -52102222 - AluSx SINE Alu -171 141 2 417 307 59 7 chr17 37402337 37402490 -52102063 + MIR SINE MIR 81 241 -21 574 274 14 11 chr17 37403246 37403404 -52101149 + MIR3 SINE MIR 10 165 -61 1906 156 16 0 chr17 37403745 37404052 -52100501 + AluJo SINE Alu 1 312 0 4132 154 58 94 chr17 37404110 37405059 -52099494 - MER21A LTR ERV1 -7 924 10 251 202 48 60 chr17 37405096 37405180 -52099373 - LTR67 LTR ERVL -47 510 428 2742 19 0 0 chr17 37405261 37405573 -52098980 - AluYb8 SINE Alu -6 312 1 212 243 14 0 chr17 37405867 37405941 -52098612 + (TCCA)n Simple_repeat Simple_repeat 4 78 0 213 281 26 79 chr17 37405950 37406064 -52098489 - L2 LINE L2 -3 3310 3203 255 281 0 0 chr17 37406894 37406958 -52097595 + MIR SINE MIR 89 152 -56 2139 102 0 3 chr17 37407098 37407392 -52097161 + AluSx SINE Alu 1 293 -19 2005 112 0 3 chr17 37407411 37407742 -52096811 - AluSq SINE Alu 0 330 1 618 275 115 45 chr17 37407751 37408011 -52096542 + L1MC4a LINE L1 5531 5828 -1980 2209 60 17 33 chr17 37408011 37408311 -52096242 + AluSc SINE Alu 1 295 -14 618 275 115 45 chr17 37408311 37408432 -52096121 + L1MC4a LINE L1 5828 5939 -1869 228 258 41 21 chr17 37408508 37408605 -52095948 + L1MC4a LINE L1 6053 6151 -1657 463 283 133 40 chr17 37408950 37409176 -52095377 + MIR SINE MIR 4 250 -12 430 304 99 6 chr17 37409742 37409903 -52094650 + MIR SINE MIR 13 188 -74 189 147 0 0 chr17 37411492 37411526 -52093027 + (A)n Simple_repeat Simple_repeat 1 34 0 2324 81 0 0 chr17 37411841 37412139 -52092414 + AluSx SINE Alu 1 298 -14 377 317 139 0 chr17 37412276 37412456 -52092097 + MIR SINE MIR 55 259 -3 462 154 26 103 chr17 37412528 37412582 -52091971 - LTR16C LTR ERVL -2 489 447 2088 121 7 0 chr17 37412582 37412879 -52091674 - AluSx SINE Alu -13 299 1 462 154 26 103 chr17 37412879 37412941 -52091612 - LTR16C LTR ERVL -44 447 382 255 219 68 0 chr17 37413022 37413095 -52091458 + MLT1F LTR MaLR 2 79 -488 297 253 173 0 chr17 37413178 37413253 -52091300 + MLT1F LTR MaLR 187 274 -281 631 232 7 20 chr17 37413279 37413430 -52091123 + MLT1F LTR MaLR 388 536 -6 1617 200 138 29 chr17 37413442 37413945 -52090608 + MER39 LTR ERV1 1 707 0 378 0 0 0 chr17 37413993 37414035 -52090518 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1687 179 3 0 chr17 37414040 37414325 -52090228 - AluJb SINE Alu -26 286 1 958 132 38 71 chr17 37414501 37414713 -52089840 - MER39 LTR ERV1 0 707 503 2044 93 74 63 chr17 37414713 37415080 -52089473 + MER4B LTR ERV1 1 371 -239 743 250 44 5 chr17 37415104 37415361 -52089192 - L1M4c LINE L1 -4736 1646 1274 4581 128 49 14 chr17 37415377 37416110 -52088443 - MER4E LTR ERV1 0 779 21 2359 65 0 0 chr17 37416134 37416428 -52088125 - AluY SINE Alu -17 294 1 990 209 38 0 chr17 37418300 37418511 -52086042 - MIR SINE MIR -31 231 13 909 234 47 0 chr17 37422454 37422668 -52081885 - MIR SINE MIR -25 237 14 2078 128 0 0 chr17 37426962 37427259 -52077294 - AluSx SINE Alu -15 297 1 1742 146 32 111 chr17 37429691 37430069 -52074484 - Tigger3(Golem) DNA MER2_type 0 3029 1 1669 174 16 10 chr17 37430810 37431120 -52073433 - AluJo SINE Alu 0 312 1 377 293 76 19 chr17 37432084 37432241 -52072312 - MIR SINE MIR 0 262 97 2449 56 0 3 chr17 37432284 37432586 -52071967 - AluY SINE Alu -10 301 1 493 196 62 0 chr17 37433399 37433496 -52071057 + AluSg SINE Alu 2 104 -206 1662 116 4 0 chr17 37433496 37433737 -52070816 + AluSx SINE Alu 63 304 -8 1979 123 0 23 chr17 37433739 37434041 -52070512 + AluSx SINE Alu 1 295 -17 1495 188 58 0 chr17 37434297 37434413 -52070140 + AluJo SINE Alu 1 109 -203 192 40 0 0 chr17 37434413 37434438 -52070115 + (TAA)n Simple_repeat Simple_repeat 1 25 0 1495 188 58 0 chr17 37434438 37434614 -52069939 + AluJo SINE Alu 109 310 -2 2207 86 0 26 chr17 37435219 37435499 -52069054 + AluSc SINE Alu 1 274 -35 216 0 0 0 chr17 37435499 37435523 -52069030 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2207 86 0 26 chr17 37435523 37435555 -52068998 + AluSc SINE Alu 274 305 -4 2032 101 10 7 chr17 37436220 37436516 -52068037 + AluSc SINE Alu 3 299 -10 2393 50 3 3 chr17 37436771 37437068 -52067485 - AluY SINE Alu -14 297 1 243 340 38 44 chr17 37437077 37437236 -52067317 + L2 LINE L2 3155 3312 -1 237 83 0 0 chr17 37437481 37437517 -52067036 + (A)n Simple_repeat Simple_repeat 1 36 0 2194 105 3 6 chr17 37437524 37437837 -52066716 + AluSx SINE Alu 1 312 0 212 0 36 0 chr17 37438739 37438767 -52065786 + (ATG)n Simple_repeat Simple_repeat 2 30 0 2270 84 3 0 chr17 37438846 37439142 -52065411 + AluSp SINE Alu 1 297 -16 2163 110 3 0 chr17 37439159 37439458 -52065095 + AluSx SINE Alu 1 300 -12 672 158 63 16 chr17 37439467 37439594 -52064959 + FLAM_A SINE Alu 1 133 0 1092 153 14 65 chr17 37439637 37439797 -52064756 - AluJo SINE Alu -23 289 141 2064 139 0 0 chr17 37439797 37440107 -52064446 - AluSx SINE Alu -2 310 1 1092 153 14 65 chr17 37440107 37440161 -52064392 - AluJo SINE Alu -171 141 86 252 311 47 51 chr17 37440178 37440324 -52064229 + MIR3 SINE MIR 6 160 -48 216 0 0 0 chr17 37441662 37441686 -52062867 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2603 200 38 91 chr17 37441777 37442183 -52062370 - LTR8 LTR ERV1 0 691 338 4560 147 53 4 chr17 37442183 37442940 -52061613 + LTR25 LTR ERV1 1 794 0 2603 200 38 91 chr17 37442940 37443262 -52061291 - LTR8 LTR ERV1 -353 338 1 210 167 0 0 chr17 37443303 37443339 -52061214 - MIR3 SINE MIR -9 199 164 1846 162 3 10 chr17 37443607 37443739 -52060814 + AluSx SINE Alu 1 132 -180 2265 86 0 3 chr17 37443739 37444040 -52060513 + AluSx SINE Alu 1 300 -12 1846 162 3 10 chr17 37444040 37444215 -52060338 + AluSx SINE Alu 132 306 -6 943 95 0 14 chr17 37445767 37445914 -52058639 - AluSg SINE Alu 0 312 168 456 114 13 13 chr17 37445933 37446012 -52058541 + LTR25 LTR ERV1 30 108 -686 1104 115 18 6 chr17 37446012 37446177 -52058376 - AluSg SINE Alu -143 167 1 2204 98 0 3 chr17 37446183 37446480 -52058073 - AluSx SINE Alu -16 296 1 21 0 0 0 chr17 37446483 37446504 -52058049 + AT_rich Low_complexity Low_complexity 1 21 0 290 240 92 96 chr17 37446727 37446956 -52057597 + MLT1K LTR MaLR 361 588 0 368 246 154 15 chr17 37447745 37447875 -52056678 + MIR SINE MIR 109 256 -6 295 250 60 60 chr17 37448507 37448607 -52055946 - L2 LINE L2 -19 3294 3195 2396 58 3 0 chr17 37448704 37448998 -52055555 + AluY SINE Alu 2 296 -15 1239 248 124 3 chr17 37449103 37449442 -52055111 + L2 LINE L2 2930 3309 -4 330 200 70 26 chr17 37449893 37450008 -52054545 - L1MC5 LINE L1 -25 7936 7817 933 114 0 8 chr17 37450031 37450163 -52054390 - FLAM_C SINE Alu -2 131 1 216 97 0 0 chr17 37450454 37450485 -52054068 + (TG)n Simple_repeat Simple_repeat 2 32 0 624 213 147 0 chr17 37450487 37450637 -52053916 + MIR SINE MIR 20 191 -71 961 213 46 14 chr17 37450639 37450855 -52053698 + L1MC4 LINE L1 6767 6989 -1053 5159 157 37 2 chr17 37450864 37451929 -52052624 - L1MB7 LINE L1 -9 6175 5077 1928 238 53 26 chr17 37451930 37452547 -52052006 + L1MC4 LINE L1 6962 7595 -447 758 138 24 16 chr17 37452547 37452670 -52051883 + FLAM_C SINE Alu 2 125 -18 5057 115 32 7 chr17 37452866 37453625 -52050928 + LTR19C LTR ERV1 1 778 -1 345 164 0 15 chr17 37453708 37453775 -52050778 + MER53 DNA DNA 1 66 -123 341 242 68 75 chr17 37454488 37454649 -52049904 + MLT1K LTR MaLR 417 576 -12 788 201 30 6 chr17 37455428 37455592 -52048961 - Zaphod DNA AcHobo -25 4006 3839 1735 91 95 15 chr17 37455592 37455866 -52048687 - AluSx SINE Alu -16 296 1 1317 194 46 3 chr17 37455888 37456172 -52048381 - Zaphod DNA AcHobo -110 3921 3626 761 164 164 31 chr17 37456184 37456538 -52048015 - Zaphod DNA AcHobo -3048 983 583 637 129 0 0 chr17 37456549 37456634 -52047919 + MER75 DNA T2_type 1 85 -429 1021 94 0 0 chr17 37456635 37456773 -52047780 + L1MA2 LINE L1 6167 6304 0 788 190 31 67 chr17 37456782 37456945 -52047608 + L1ME2 LINE L1 5813 5946 -296 2104 127 0 0 chr17 37456945 37457253 -52047300 + AluSx SINE Alu 1 308 -4 788 190 31 67 chr17 37457253 37457393 -52047160 + L1ME2 LINE L1 5946 6090 -152 544 245 33 7 chr17 37457339 37457490 -52047063 + L1MA10 LINE L1 6177 6331 -3 * 2326 66 7 0 chr17 37457869 37458170 -52046383 - AluSp SINE Alu -9 304 2 1997 126 3 3 chr17 37458292 37458594 -52045959 + AluSq SINE Alu 1 302 -11 2160 117 3 0 chr17 37458849 37459158 -52045395 + AluSx SINE Alu 3 312 0 2263 53 4 0 chr17 37459283 37459587 -52044966 + AluY SINE Alu 1 305 0 1682 130 65 3 chr17 37459617 37459909 -52044644 + AluJo SINE Alu 3 312 0 358 238 90 25 chr17 37459959 37460081 -52044472 - MIR SINE MIR -85 177 48 294 323 110 24 chr17 37460904 37461031 -52043522 - MIR3 SINE MIR -59 149 12 598 211 60 25 chr17 37461109 37461308 -52043245 - L1MC5 LINE L1 -303 7658 7453 2202 58 3 48 chr17 37461801 37462110 -52042443 + AluY SINE Alu 1 295 -16 7918 137 41 41 chr17 37462181 37462475 -52042078 - L1P3 LINE L1 -4015 2446 2153 1932 117 59 0 chr17 37462475 37462765 -52041788 - AluSx SINE Alu -5 307 1 7918 137 41 41 chr17 37462765 37463629 -52040924 - L1P3 LINE L1 -4308 2153 1263 186 71 0 0 chr17 37463629 37463657 -52040896 + (TTG)n Simple_repeat Simple_repeat 1 28 0 7918 137 41 41 chr17 37463657 37464456 -52040097 - L1P3 LINE L1 -5198 1263 465 6228 116 16 27 chr17 37464456 37464841 -52039712 - Tigger1 DNA MER2_type -506 1912 1524 2204 89 0 29 chr17 37464841 37465157 -52039396 + AluY SINE Alu 1 307 -4 6228 116 16 27 chr17 37465157 37465732 -52038821 - Tigger1 DNA MER2_type -894 1524 963 207 69 0 0 chr17 37465960 37465989 -52038564 + (CA)n Simple_repeat Simple_repeat 2 30 0 3618 132 16 33 chr17 37466030 37466159 -52038394 - L1PA15 LINE L1 -2 6163 6033 2090 124 0 9 chr17 37466159 37466474 -52038079 - AluSx SINE Alu 0 312 1 3618 132 16 33 chr17 37466474 37466952 -52037601 - L1PA15 LINE L1 -132 6033 5566 2932 145 29 6 chr17 37466969 37467624 -52036929 - L1M2 LINE L1 -523 5768 5101 1247 159 0 44 chr17 37467708 37467935 -52036618 - AluJo SINE Alu -12 300 84 638 277 85 37 chr17 37467941 37468342 -52036211 - L1M4 LINE L1 -991 5155 4736 934 286 124 32 chr17 37468785 37469222 -52035331 - L2 LINE L2 -1 3312 2836 697 187 18 164 chr17 37469228 37469453 -52035100 + MER20 DNA MER1_type 2 193 -26 314 175 250 0 chr17 37469631 37469711 -52034842 - L2 LINE L2 -36 3236 3137 837 229 24 0 chr17 37470494 37470660 -52033893 + MIR SINE MIR 2 171 -91 427 267 80 27 chr17 37470667 37470817 -52033736 + MIR SINE MIR 48 205 -57 1521 254 85 16 chr17 37470916 37470942 -52033611 + HAL1 LINE L1 1182 1205 -1302 1559 133 4 0 chr17 37470942 37471175 -52033378 - AluSq SINE Alu -79 234 1 1521 254 85 16 chr17 37471175 37471360 -52033193 + HAL1 LINE L1 1205 1376 -1131 2453 44 0 19 chr17 37471360 37471677 -52032876 + AluY SINE Alu 1 311 0 1521 254 85 16 chr17 37471677 37472026 -52032527 + HAL1 LINE L1 1376 1782 -725 1222 94 64 44 chr17 37472111 37472314 -52032239 + AluSc SINE Alu 101 307 -2 866 239 159 25 chr17 37472348 37472871 -52031682 + HAL1 LINE L1 1912 2504 -3 1810 117 0 68 chr17 37473003 37473150 -52031403 + AluSx SINE Alu 1 118 -194 2306 63 0 10 chr17 37473150 37473451 -52031102 + AluY SINE Alu 1 298 -13 1810 117 0 68 chr17 37473451 37473610 -52030943 + AluSx SINE Alu 118 286 -26 221 318 129 0 chr17 37473620 37473705 -52030848 + MIR3 SINE MIR 107 202 -6 2811 170 16 33 chr17 37474065 37474642 -52029911 + L1MB8 LINE L1 5611 6177 -1 2367 72 0 22 chr17 37475121 37475439 -52029114 + AluY SINE Alu 1 311 0 1963 141 7 0 chr17 37476999 37477305 -52027248 - AluSg SINE Alu -2 308 1 21 36 0 0 chr17 37477305 37477333 -52027220 + AT_rich Low_complexity Low_complexity 1 28 0 765 227 49 16 chr17 37477463 37477648 -52026905 - MER58C DNA MER1_type -10 205 15 276 263 0 50 chr17 37477830 37477910 -52026643 - MIR3 SINE MIR -3 205 130 2401 55 0 0 chr17 37477920 37478211 -52026342 + AluY SINE Alu 1 291 -20 1691 136 0 144 chr17 37478444 37478739 -52025814 - AluSx SINE Alu 0 381 155 2242 91 0 16 chr17 37478739 37479046 -52025507 - AluSc SINE Alu -7 302 1 1691 136 0 144 chr17 37479046 37479182 -52025371 - AluSx SINE Alu -226 155 1 228 324 46 68 chr17 37479204 37479423 -52025130 - L1ME LINE L1 -5852 218 5 1775 104 0 41 chr17 37479459 37479727 -52024826 - AluSx SINE Alu -19 293 37 649 223 43 0 chr17 37480381 37480520 -52024033 + MER105 DNA DNA 44 188 -16 407 141 244 0 chr17 37480557 37480635 -52023918 - AluSp/q SINE Alu -1 302 206 2154 102 3 10 chr17 37480913 37481217 -52023336 - AluSp SINE Alu -11 302 1 251 303 0 0 chr17 37481478 37481544 -52023009 - MIR SINE MIR -27 235 170 2125 108 3 0 chr17 37481570 37481866 -52022687 - AluSx SINE Alu -15 297 1 315 154 167 26 chr17 37482218 37482296 -52022257 - MIR SINE MIR -82 180 92 293 308 11 0 chr17 37482548 37482639 -52021914 + MIR SINE MIR 53 144 -64 625 222 169 5 chr17 37482707 37482896 -52021657 - MIR SINE MIR -16 246 27 1086 144 0 44 chr17 37482912 37483093 -52021460 - FAM SINE Alu -2 173 1 189 0 0 0 chr17 37483802 37483823 -52020730 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2149 161 38 17 chr17 37484386 37484803 -52019750 + L1MB3 LINE L1 5739 6164 -19 348 235 0 0 chr17 37484803 37484871 -52019682 - L1MC4 LINE L1 -1339 6703 6636 1473 177 0 62 chr17 37484874 37485179 -52019374 - AluJb SINE Alu -26 286 1 270 0 0 0 chr17 37485192 37485222 -52019331 + (CA)n Simple_repeat Simple_repeat 2 31 0 1585 132 45 42 chr17 37485223 37485511 -52019042 - AluJb SINE Alu -23 289 1 1915 116 20 14 chr17 37485621 37485913 -52018640 - AluSx SINE Alu -18 294 1 2445 36 3 7 chr17 37486199 37486504 -52018049 - AluY SINE Alu -7 304 1 186 227 0 0 chr17 37487025 37487069 -52017484 + CT-rich Low_complexity Low_complexity 1 44 0 1899 126 0 49 chr17 37487434 37487759 -52016794 + AluJb SINE Alu 1 309 -3 226 289 48 12 chr17 37488364 37488447 -52016106 - MIR SINE MIR -175 87 2 402 333 47 85 chr17 37488959 37489250 -52015303 - L2 LINE L2 -14 3258 2990 2212 82 24 0 chr17 37489250 37489542 -52015011 + AluSx SINE Alu 1 299 -13 402 333 47 85 chr17 37489542 37489722 -52014831 - L2 LINE L2 -282 2990 2805 715 269 34 34 chr17 37489851 37490085 -52014468 + MIR SINE MIR 29 262 0 2231 95 7 0 chr17 37490640 37490944 -52013609 + AluSq SINE Alu 1 306 -7 180 77 0 0 chr17 37490947 37490973 -52013580 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 333 281 193 6 chr17 37492062 37492233 -52012320 - MIR SINE MIR -55 207 5 629 289 138 26 chr17 37492754 37493059 -52011494 - L2 LINE L2 -2974 340 2 687 163 0 0 chr17 37493302 37493449 -52011104 + CT-rich Low_complexity Low_complexity 2 148 0 207 0 0 0 chr17 37493468 37493491 -52011062 + (TCCA)n Simple_repeat Simple_repeat 4 26 0 237 289 13 40 chr17 37493491 37493567 -52010986 - L2 LINE L2 -21 3251 3178 211 293 132 0 chr17 37495407 37495513 -52009040 + MIR3 SINE MIR 37 156 -52 458 296 251 15 chr17 37497655 37497854 -52006699 - MIR SINE MIR -12 250 5 378 261 255 0 chr17 37498025 37498178 -52006375 + MER117 DNA MER1_type 1 192 -5 235 277 89 27 chr17 37498199 37498311 -52006242 - MIR SINE MIR -68 140 22 968 254 122 32 chr17 37498819 37499229 -52005324 - MLT1J2 LTR MaLR -3 447 1 21 0 0 0 chr17 37499426 37499447 -52005106 + AT_rich Low_complexity Low_complexity 1 21 0 452 266 0 0 chr17 37499497 37499610 -52004943 - HAL1 LINE L1 -821 1686 1574 1609 244 6 72 chr17 37499682 37499988 -52004565 - L1MC4 LINE L1 -1120 6922 6662 1851 139 23 0 chr17 37499988 37500290 -52004263 - AluSx SINE Alu -3 309 1 1609 244 6 72 chr17 37500290 37500496 -52004057 - L1MC4 LINE L1 -1380 6662 6444 1863 95 95 0 chr17 37500708 37500981 -52003572 - AluSq SINE Alu -14 299 1 1897 139 0 26 chr17 37501047 37501356 -52003197 - AluJb SINE Alu -11 301 1 810 186 13 6 chr17 37501654 37501810 -52002743 + MER5A DNA MER1_type 32 188 -1 2285 98 0 0 chr17 37502055 37502362 -52002191 - AluSx SINE Alu -5 307 1 294 258 54 32 chr17 37502395 37502488 -52002065 + L2 LINE L2 3219 3313 0 265 302 112 22 chr17 37502514 37502693 -52001860 - L2 LINE L2 -190 3082 2888 2020 123 0 0 chr17 37502816 37503109 -52001444 + AluSx SINE Alu 11 303 -9 1664 147 10 23 chr17 37503506 37503806 -52000747 + AluJb SINE Alu 2 297 -15 2226 130 0 0 chr17 37503978 37504286 -52000267 + AluSx SINE Alu 1 308 -4 5762 105 29 12 chr17 37504701 37504862 -51999691 + L1PA16 LINE L1 4234 4391 -1775 234 0 0 0 chr17 37504862 37504888 -51999665 + (CA)n Simple_repeat Simple_repeat 1 26 0 5762 105 29 12 chr17 37504888 37506625 -51997928 + L1PA16 LINE L1 4391 6166 0 433 286 55 29 chr17 37506632 37506870 -51997683 + HAL1 LINE L1 1424 1667 -840 325 223 107 18 chr17 37506877 37506989 -51997564 - LTR67 LTR ERVL -2 555 434 1509 138 9 0 chr17 37506993 37507211 -51997342 + AluSq SINE Alu 1 220 -93 261 0 0 0 chr17 37507562 37507591 -51996962 + (TTA)n Simple_repeat Simple_repeat 2 30 0 269 188 35 47 chr17 37507964 37508049 -51996504 + HAL1b LINE L1 1029 1112 -236 697 269 71 18 chr17 37509666 37509861 -51994692 + MER46C DNA MER2_type 42 258 -80 1861 151 10 10 chr17 37509861 37510160 -51994393 - AluJo SINE Alu -12 300 2 697 269 71 18 chr17 37510160 37510246 -51994307 + MER46C DNA MER2_type 258 338 0 2608 53 0 0 chr17 37510269 37510569 -51993984 + AluY SINE Alu 1 300 -11 2207 108 3 7 chr17 37510579 37510885 -51993668 + AluSx SINE Alu 1 305 -7 1685 216 54 62 chr17 37510886 37511386 -51993167 + MER74B LTR ERVL 111 606 -16 2466 143 30 2 chr17 37512335 37512941 -51991612 - MER50 LTR ERV1 -23 711 7 1900 104 8 8 chr17 37512953 37513213 -51991340 - AluSq SINE Alu -16 297 38 252 0 0 0 chr17 37513909 37513937 -51990616 + (TG)n Simple_repeat Simple_repeat 1 28 0 1474 156 100 7 chr17 37513956 37514226 -51990327 + AluJo SINE Alu 1 295 -17 282 170 0 0 chr17 37514231 37514278 -51990275 - L1MB1 LINE L1 -18 6150 6104 3199 145 78 22 chr17 37514356 37514942 -51989611 - LTR8A LTR ERV1 -108 619 1 2403 149 29 0 chr17 37515046 37515429 -51989124 - MER57A LTR ERV1 -9 394 1 1025 152 11 17 chr17 37515536 37515714 -51988839 - FRAM SINE Alu -2 174 1 22 88 0 0 chr17 37516054 37516111 -51988442 + AT_rich Low_complexity Low_complexity 1 57 0 3721 165 32 41 chr17 37516172 37516745 -51987808 + MER50 LTR ERV1 1 568 -166 2032 128 28 0 chr17 37516745 37517027 -51987526 - AluSx SINE Alu -22 290 1 3721 165 32 41 chr17 37517027 37517192 -51987361 + MER50 LTR ERV1 568 733 -1 1175 189 55 108 chr17 37517211 37517235 -51987318 + LTR37B LTR ERV1 21 45 -423 2449 90 0 0 chr17 37517235 37517536 -51987017 + AluSg SINE Alu 3 303 -7 1175 189 55 108 chr17 37517536 37517982 -51986571 + LTR37B LTR ERV1 45 466 -2 228 204 0 56 chr17 37518045 37518062 -51986491 + AluSc SINE Alu 117 133 -166 828 168 0 0 chr17 37518062 37518193 -51986360 + FLAM_C SINE Alu 1 131 -2 228 204 0 56 chr17 37518193 37518229 -51986324 + AluSc SINE Alu 133 167 -132 2736 163 98 141 chr17 37518230 37519093 -51985460 + LTR1B LTR ERV1 1 826 0 15606 164 39 16 chr17 37519094 37521832 -51982721 + HUERS-P2 LTR ERV1 2 2801 -287 2545 144 29 10 chr17 37521832 37522248 -51982305 + HUERS-P2 LTR ERV1 2665 3088 0 2442 171 125 63 chr17 37522248 37522990 -51981563 + LTR1B LTR ERV1 1 779 -6 524 261 55 20 chr17 37522990 37523317 -51981236 + LTR46 LTR ERV1 1 430 -30 649 172 55 0 chr17 37523331 37523459 -51981094 + AluJb SINE Alu 157 291 -21 531 297 81 5 chr17 37525093 37525302 -51979251 + MER46C DNA MER2_type 4 228 -110 2525 164 36 95 chr17 37525341 37525943 -51978610 - L1MB3 LINE L1 -1 6182 5616 430 214 0 0 chr17 37525944 37526028 -51978525 + MER46C DNA MER2_type 255 338 0 2268 96 0 23 chr17 37526154 37526457 -51978096 + AluSx SINE Alu 1 296 -16 56 71 0 0 chr17 37526457 37526569 -51977984 + AT_rich Low_complexity Low_complexity 1 112 0 3674 83 14 2 chr17 37526569 37527060 -51977493 - L1PA8 LINE L1 -9 6163 5667 21 0 0 0 chr17 37527075 37527096 -51977457 + AT_rich Low_complexity Low_complexity 1 21 0 274 181 60 15 chr17 37527100 37527233 -51977320 + (TATAA)n Simple_repeat Simple_repeat 3 141 0 393 262 29 0 chr17 37527483 37527586 -51976967 + MIR SINE MIR 52 157 -105 351 237 0 43 chr17 37527657 37527750 -51976803 + MIR SINE MIR 153 241 -21 427 245 0 9 chr17 37528950 37529056 -51975497 + L2 LINE L2 2453 2557 -757 2034 226 75 47 chr17 37529100 37529697 -51974856 - MER21B LTR ERV1 -152 711 98 22049 106 15 29 chr17 37530045 37534208 -51970345 - L1P3 LINE L1 -2068 4393 191 830 216 47 28 chr17 37534217 37534430 -51970123 - LTR3 LTR ERVK -5 427 211 1393 102 0 0 chr17 37534430 37534616 -51969937 - L1P3 LINE L1 -6268 193 8 458 225 28 94 chr17 37535229 37535471 -51969082 + MLT1H LTR MaLR 241 547 -2 1630 174 10 24 chr17 37535578 37535871 -51968682 - AluJb SINE Alu -23 289 1 435 299 16 57 chr17 37536210 37536404 -51968149 - MIR SINE MIR -30 232 47 629 70 0 60 chr17 37536522 37536622 -51967931 - L1MD1 LINE L1 0 6242 6149 2403 134 8 138 chr17 37536622 37536724 -51967829 + MER65C LTR ERV1 2 116 -345 2349 97 7 0 chr17 37536724 37537032 -51967521 + AluSg SINE Alu 1 310 0 2403 134 8 138 chr17 37537032 37537458 -51967095 + MER65C LTR ERV1 116 461 0 3134 152 11 9 chr17 37537458 37537983 -51966570 - L1MD1 LINE L1 -89 6153 5628 516 218 177 14 chr17 37538896 37539043 -51965510 + MER45A DNA AcHobo 1 171 -7 987 201 4 46 chr17 37539652 37539891 -51964662 - MER96B DNA MER1_type? -3 414 186 919 130 0 32 chr17 37539911 37540096 -51964457 + (TCCA)n Simple_repeat Simple_repeat 2 180 0 402 326 210 12 chr17 37540097 37540425 -51964128 - L2 LINE L2 -1 3312 2920 3162 134 18 21 chr17 37540852 37541365 -51963188 + LTR10D LTR ERV1 1 511 -2 605 299 104 0 chr17 37541942 37542173 -51962380 + L2 LINE L2 2499 2753 -561 556 275 121 54 chr17 37542209 37542580 -51961973 + L2 LINE L2 2873 3268 -45 2588 169 65 27 chr17 37544433 37544953 -51959600 + MER34 LTR ERV1 1 540 -2 180 345 92 23 chr17 37544960 37545134 -51959419 - MIR SINE MIR -49 213 28 267 254 111 24 chr17 37545158 37545284 -51959269 + MIR SINE MIR 74 210 -52 666 269 5 30 chr17 37545293 37545490 -51959063 - MIR SINE MIR -4 258 67 1984 159 0 7 chr17 37545644 37545952 -51958601 - AluJb SINE Alu -4 308 3 505 209 0 115 chr17 37546162 37546344 -51958209 - L1MD3 LINE L1 -10 7985 7825 2246 111 0 0 chr17 37546353 37546641 -51957912 - AluSx SINE Alu -24 288 1 304 231 0 0 chr17 37547008 37547060 -51957493 + Tigger3(Golem) DNA MER2_type 2 53 -2976 * 688 174 43 0 chr17 37547053 37547168 -51957385 - Tigger3(Golem) DNA MER2_type -6 3023 2904 1730 130 52 0 chr17 37547218 37547488 -51957065 + MER7A DNA MER2_type 65 346 0 209 286 99 22 chr17 37547598 37547689 -51956864 - L3 LINE CR1 -1196 381 284 2589 56 0 3 chr17 37547714 37548018 -51956535 + AluY SINE Alu 1 303 -8 209 260 164 0 chr17 37548408 37548481 -51956072 - L2 LINE L2 0 3313 3229 2454 71 3 0 chr17 37549006 37549300 -51955253 - AluSp SINE Alu -18 295 1 2263 108 3 7 chr17 37549303 37549608 -51954945 - AluSq SINE Alu -9 304 1 648 119 45 0 chr17 37549620 37549846 -51954707 + (TA)n Simple_repeat Simple_repeat 1 236 0 1817 155 3 10 chr17 37550068 37550359 -51954194 - AluJb SINE Alu -23 289 1 798 277 113 27 chr17 37550359 37550767 -51953786 - L1ME3A LINE L1 -231 5939 5497 249 197 0 0 chr17 37550830 37550891 -51953662 + GA-rich Low_complexity Low_complexity 4 64 0 411 21 0 0 chr17 37551499 37551547 -51953006 + (ATG)n Simple_repeat Simple_repeat 2 49 0 2443 35 11 7 chr17 37551554 37551839 -51952714 - AluY SINE Alu -25 286 1 3247 222 74 32 chr17 37552200 37553109 -51951444 - L1MCc LINE L1 -2907 4034 3071 2486 90 0 0 chr17 37553109 37553420 -51951133 - AluY SINE Alu 0 311 1 3247 222 74 32 chr17 37553420 37553595 -51950958 - L1MCc LINE L1 -3870 3071 2905 1130 254 4 34 chr17 37553636 37553984 -51950569 - L1ME2 LINE L1 -9 6155 5815 28 0 0 0 chr17 37554180 37554208 -51950345 + AT_rich Low_complexity Low_complexity 1 28 0 974 284 102 44 chr17 37554209 37554376 -51950177 - L1MCc LINE L1 -4555 2567 2411 1645 189 31 3 chr17 37554376 37554667 -51949886 - AluJo SINE Alu -13 299 1 974 284 102 44 chr17 37554667 37555607 -51948946 - L1MCc LINE L1 -4711 2411 1171 357 307 6 42 chr17 37556171 37556337 -51948216 - L1MCc LINE L1 -5971 452 293 369 0 0 0 chr17 37556418 37556459 -51948094 + (TG)n Simple_repeat Simple_repeat 2 42 0 1626 190 34 39 chr17 37556482 37556805 -51947748 - L1ME1 LINE L1 -5 6161 5839 2860 159 5 2 chr17 37556805 37557232 -51947321 - MSTA LTR MaLR 0 428 1 1626 190 34 39 chr17 37557232 37557293 -51947260 - L1ME1 LINE L1 -327 5839 5779 416 357 76 62 chr17 37557354 37557842 -51946711 + L1M2 LINE L1 13 507 -6342 317 301 39 32 chr17 37558032 37558188 -51946365 + L1P4 LINE L1 767 923 -5927 1387 261 71 25 chr17 37558394 37559288 -51945265 + L1P4 LINE L1 1018 2051 -4798 14572 189 31 20 chr17 37559389 37560271 -51944282 + L1P4 LINE L1 2620 3491 -3378 2163 59 17 35 chr17 37560271 37560598 -51943955 + AluY SINE Alu 1 322 0 14572 189 31 20 chr17 37560598 37563401 -51941152 + L1P4 LINE L1 3491 6337 -532 2294 208 30 30 chr17 37563506 37563821 -51940732 + L1 LINE L1 4457 4774 -1372 2406 95 0 0 chr17 37563821 37564127 -51940426 + AluSp SINE Alu 2 307 -6 2294 208 30 30 chr17 37564127 37564374 -51940179 + L1 LINE L1 4773 5019 -1127 2900 3 0 0 chr17 37564386 37564695 -51939858 + AluYa5 SINE Alu 1 309 -2 2163 99 0 3 chr17 37564707 37565022 -51939531 + AluY SINE Alu 1 314 0 2249 102 7 0 chr17 37565275 37565578 -51938975 + AluSg SINE Alu 1 305 -5 185 289 116 66 chr17 37565898 37566019 -51938534 + L2 LINE L2 2944 3070 -202 181 333 50 0 chr17 37566070 37566130 -51938423 - L2 LINE L2 -5 3267 3205 434 349 74 0 chr17 37566207 37566356 -51938197 + L2 LINE L2 3113 3272 0 2478 84 28 4 chr17 37566691 37567124 -51937429 + L1PA8 LINE L1 5156 5593 -561 4843 47 2 10 chr17 37567396 37567975 -51936578 + L1PA8 LINE L1 5598 6171 -1 2076 129 3 3 chr17 37568108 37568419 -51936134 + AluY SINE Alu 1 311 0 252 0 0 0 chr17 37569006 37569034 -51935519 + (T)n Simple_repeat Simple_repeat 1 28 0 246 154 0 0 chr17 37569135 37569174 -51935379 - Alu SINE Alu -261 39 1 2059 114 7 17 chr17 37569437 37569599 -51934954 - AluSx SINE Alu -16 296 137 2194 110 0 3 chr17 37569599 37569890 -51934663 - AluSc SINE Alu -19 290 1 2059 114 7 17 chr17 37569890 37570026 -51934527 - AluSx SINE Alu -175 137 1 2881 10 0 0 chr17 37570046 37570357 -51934196 - AluYb8 SINE Alu -7 311 1 186 43 0 0 chr17 37570378 37570401 -51934152 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 420 315 11 88 chr17 37570621 37570881 -51933672 - L2 LINE L2 -196 3076 2837 2097 107 0 4 chr17 37570917 37571230 -51933323 - AluSc SINE Alu 0 312 1 456 149 27 0 chr17 37571362 37571436 -51933117 + MER44D DNA MER2_type 11 356 -253 2971 151 45 36 chr17 37571443 37571839 -51932714 - MER7C DNA MER2_type -2427 601 197 1764 155 87 31 chr17 37571839 37572194 -51932359 + THE1C LTR MaLR 1 375 0 2971 151 45 36 chr17 37572194 37572354 -51932199 - MER7C DNA MER2_type -2831 197 40 1239 145 61 0 chr17 37572371 37572423 -51932130 + MER44D DNA MER2_type 364 411 -2076 1697 148 23 30 chr17 37572423 37572728 -51931825 - AluSx SINE Alu -9 303 1 1239 145 61 0 chr17 37572728 37572903 -51931650 + MER44D DNA MER2_type 411 605 0 415 298 132 67 chr17 37572903 37573206 -51931347 - L2 LINE L2 -680 2634 2352 1918 138 21 3 chr17 37573206 37573496 -51931057 + AluSx SINE Alu 6 300 -12 415 298 132 67 chr17 37573496 37573656 -51930897 - L2 LINE L2 -962 2352 2204 2320 88 3 0 chr17 37573656 37573951 -51930602 + AluY SINE Alu 1 296 -15 415 298 132 67 chr17 37573951 37574070 -51930483 - L2 LINE L2 -1110 2204 2013 1805 199 88 20 chr17 37574080 37574478 -51930075 - MSTB LTR MaLR -1 425 1 2384 73 0 10 chr17 37574491 37574791 -51929762 - AluSc SINE Alu -11 298 2 798 187 0 14 chr17 37574803 37574942 -51929611 - FLAM_C SINE Alu -5 138 2 241 198 9 45 chr17 37575025 37575136 -51929417 + (TATG)n Simple_repeat Simple_repeat 2 108 0 189 171 0 0 chr17 37575141 37575176 -51929377 + (CA)n Simple_repeat Simple_repeat 2 36 0 1789 164 3 22 chr17 37575176 37575493 -51929060 - AluJb SINE Alu -1 311 1 2351 89 3 0 chr17 37576031 37576334 -51928219 - AluSp SINE Alu -9 304 1 1826 147 14 7 chr17 37576881 37577173 -51927380 + AluSx SINE Alu 1 294 -18 1581 158 9 80 chr17 37577391 37577727 -51926826 + AluJb SINE Alu 1 312 0 1911 143 16 13 chr17 37578339 37578647 -51925906 - AluSx SINE Alu -2 310 2 551 255 140 36 chr17 37578747 37579076 -51925477 - L1MC/D LINE L1 -2109 5699 5337 1308 168 191 0 chr17 37579096 37579352 -51925201 - AluSx SINE Alu -7 305 1 841 209 6 18 chr17 37579599 37579762 -51924791 - FRAM SINE Alu -14 162 2 2529 47 7 3 chr17 37580007 37580306 -51924247 + AluY SINE Alu 1 300 -11 216 186 47 0 chr17 37580480 37580523 -51924030 + T-rich Low_complexity Low_complexity 5 49 0 192 125 0 0 chr17 37580525 37580557 -51923996 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 1661 164 23 39 chr17 37580559 37580869 -51923684 - AluJo SINE Alu -7 305 1 700 262 40 87 chr17 37580884 37580969 -51923584 - L1MEd LINE L1 -2712 3417 3330 1954 131 3 3 chr17 37580969 37581271 -51923282 - AluSx SINE Alu 0 302 1 700 262 40 87 chr17 37581271 37581352 -51923201 - L1MEd LINE L1 -2799 3330 3247 2151 74 0 104 chr17 37581352 37581553 -51923000 - AluSq SINE Alu -10 303 149 2404 66 0 0 chr17 37581553 37581854 -51922699 - AluY SINE Alu -10 301 1 2151 74 0 104 chr17 37581854 37581990 -51922563 - AluSq SINE Alu -164 149 1 700 262 40 87 chr17 37581990 37582317 -51922236 - L1MEd LINE L1 -2882 3247 2945 1535 145 0 24 chr17 37582319 37582574 -51921979 - AluJb SINE Alu 0 312 64 295 268 24 0 chr17 37582605 37582687 -51921866 - L1MEd LINE L1 -3166 2963 2880 21 36 0 0 chr17 37582846 37582874 -51921679 + AT_rich Low_complexity Low_complexity 1 28 0 327 281 93 87 chr17 37582913 37582999 -51921554 - L1MEd LINE L1 -4300 2010 1926 2102 138 0 0 chr17 37582999 37583297 -51921256 - AluSx SINE Alu -14 298 1 327 281 93 87 chr17 37583297 37583576 -51920977 - L1MEd LINE L1 -4384 1926 1643 443 303 119 31 chr17 37583676 37584049 -51920504 - L1MEd LINE L1 -4874 1245 906 1653 171 39 7 chr17 37584049 37584335 -51920218 - AluJo SINE Alu -17 295 1 443 303 119 31 chr17 37584335 37584593 -51919960 - L1MEd LINE L1 -5213 906 658 2112 139 3 0 chr17 37584593 37584896 -51919657 + AluSx SINE Alu 1 304 -8 443 303 119 31 chr17 37584896 37584975 -51919578 - L1MEd LINE L1 -5461 658 587 2409 88 3 0 chr17 37585207 37585514 -51919039 + AluSp SINE Alu 1 308 -5 959 69 0 0 chr17 37585664 37585780 -51918773 + AluSp/q SINE Alu 174 289 -24 1829 51 5 0 chr17 37586470 37586685 -51917868 + AluY SINE Alu 83 298 -13 1396 95 0 6 chr17 37587297 37587529 -51917024 - AluSg/x SINE Alu 0 333 103 26 0 0 0 chr17 37588059 37588085 -51916468 + AT_rich Low_complexity Low_complexity 1 26 0 3641 227 123 14 chr17 37588369 37588663 -51915890 - L1MC4 LINE L1 0 8042 7781 1917 152 3 7 chr17 37588663 37588973 -51915580 - AluSx SINE Alu -3 309 1 3641 227 123 14 chr17 37588973 37589815 -51914738 - L1MC4 LINE L1 -261 7781 6686 402 21 0 0 chr17 37589815 37589862 -51914691 + (TG)n Simple_repeat Simple_repeat 2 48 0 3641 227 123 14 chr17 37589862 37589920 -51914633 - L1MC4 LINE L1 -1356 6686 6636 1876 135 17 20 chr17 37589933 37590230 -51914323 + AluSx SINE Alu 1 296 -16 2197 114 0 3 chr17 37590232 37590530 -51914023 + AluSg SINE Alu 1 297 -13 1191 138 0 0 chr17 37590530 37590697 -51913856 + AluSg/x SINE Alu 132 298 -12 433 259 153 5 chr17 37590732 37590921 -51913632 - L1MC4a LINE L1 -1193 6615 6444 1515 188 11 11 chr17 37591236 37591507 -51913046 - AluJb SINE Alu -36 276 6 240 97 0 0 chr17 37591509 37591540 -51913013 - Alu SINE Alu -265 36 6 239 167 0 0 chr17 37591542 37591578 -51912975 - Alu SINE Alu -266 36 1 396 319 59 11 chr17 37591648 37591918 -51912635 - L1 LINE L1 -1129 5017 4735 323 211 99 56 chr17 37591997 37592139 -51912414 - L1 LINE L1 -1549 4597 4450 1625 165 9 38 chr17 37592208 37592524 -51912029 + AluJo SINE Alu 6 312 0 1884 159 0 17 chr17 37592539 37592841 -51911712 + AluJo SINE Alu 1 297 -15 277 388 0 0 chr17 37592981 37593066 -51911487 - L2 LINE L2 -3 3269 3185 23 33 0 0 chr17 37593109 37593139 -51911414 + AT_rich Low_complexity Low_complexity 1 30 0 1621 121 0 9 chr17 37593537 37593768 -51910785 - L1PB1 LINE L1 0 6151 5923 1904 147 0 32 chr17 37593788 37594100 -51910453 - AluSx SINE Alu -10 302 1 649 197 77 0 chr17 37594104 37594221 -51910332 - FLAM_C SINE Alu -16 127 2 237 65 0 0 chr17 37594501 37594532 -51910021 + (TG)n Simple_repeat Simple_repeat 2 32 0 1142 69 0 7 chr17 37594794 37594938 -51909615 - AluSg/x SINE Alu -14 296 154 722 90 0 0 chr17 37594938 37595027 -51909526 - AluY SINE Alu -221 90 2 1202 117 6 0 chr17 37595033 37595196 -51909357 - AluSg/x SINE Alu -15 297 134 1804 163 3 17 chr17 37595196 37595496 -51909057 - AluSx SINE Alu -16 296 1 510 17 0 0 chr17 37596414 37596473 -51908080 + (CA)n Simple_repeat Simple_repeat 2 60 0 1652 191 7 14 chr17 37597027 37597321 -51907232 - AluJb SINE Alu -20 292 1 1254 195 23 65 chr17 37597607 37597914 -51906639 - AluJo SINE Alu -8 294 1 1994 141 0 17 chr17 37598812 37599110 -51905443 - AluSx SINE Alu -13 299 7 2365 91 0 3 chr17 37599275 37599572 -51904981 + AluY SINE Alu 3 298 -13 2166 181 51 22 chr17 37599693 37600147 -51904406 - MLT1C LTR MaLR 0 467 1 416 301 8 45 chr17 37600149 37600282 -51904271 - MLT1C-int LTR MaLR -2 1369 1242 * 1232 219 61 52 chr17 37600281 37600379 -51904174 - MLT1C-int LTR MaLR -95 1276 1180 2204 126 0 3 chr17 37600379 37600681 -51903872 + AluSx SINE Alu 2 302 -10 1232 219 61 52 chr17 37600681 37600910 -51903643 - MLT1C-int LTR MaLR -191 1180 946 189 0 0 0 chr17 37600969 37600990 -51903563 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 834 194 0 0 chr17 37601049 37601183 -51903370 + FAM SINE Alu 1 44 -5 1025 152 0 33 chr17 37601183 37601367 -51903186 - MER47B DNA MER2_type -84 334 157 1289 180 41 34 chr17 37601367 37601514 -51903039 - AluJb SINE Alu -15 297 152 7254 112 19 24 chr17 37601514 37602589 -51901964 - MER11C LTR ERVK -2 1069 1 1289 180 41 34 chr17 37602589 37602736 -51901817 - AluJb SINE Alu -160 152 1 1803 156 121 48 chr17 37602864 37603261 -51901292 + Tigger1 DNA MER2_type 2 427 -1991 * 4683 129 34 7 chr17 37603252 37603990 -51900563 + Tigger1 DNA MER2_type 1326 2083 -335 439 186 0 0 chr17 37604023 37604093 -51900460 + FLAM SINE Alu 50 119 -24 216 0 0 0 chr17 37604095 37604119 -51900434 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 394 241 0 0 chr17 37604139 37604222 -51900331 + Tigger1 DNA MER2_type 2109 2191 -227 534 65 0 39 chr17 37604287 37604364 -51900189 + AluJ/FRAM SINE Alu 231 304 -8 2200 90 3 42 chr17 37604368 37604678 -51899875 + AluY SINE Alu 1 298 -13 204 254 48 32 chr17 37604830 37604893 -51899660 + MIR SINE MIR 14 77 -185 198 215 154 100 chr17 37604896 37605026 -51899527 + MIR SINE MIR 44 180 -82 22 0 0 0 chr17 37606049 37606071 -51898482 + AT_rich Low_complexity Low_complexity 1 22 0 2161 198 63 11 chr17 37606803 37607323 -51897230 - L1MB4 LINE L1 -7 6173 5627 1641 163 39 14 chr17 37607337 37607620 -51896933 - AluJo SINE Alu -22 290 1 277 231 207 0 chr17 37607622 37607743 -51896810 - L1MB4 LINE L1 -816 5330 5185 2000 117 10 29 chr17 37607748 37608055 -51896498 - AluSx SINE Alu -11 301 1 1796 223 136 29 chr17 37608055 37608558 -51895995 + L1M4 LINE L1 4187 4635 -1511 2287 85 3 7 chr17 37608558 37608852 -51895701 + AluY SINE Alu 1 293 -18 2301 117 7 0 chr17 37608854 37609161 -51895392 + AluSx SINE Alu 1 309 -3 1796 223 136 29 chr17 37609161 37609277 -51895276 + L1M4 LINE L1 4635 4876 -1270 1856 164 0 0 chr17 37609280 37609555 -51894998 + AluSx SINE Alu 2 276 -36 406 153 0 0 chr17 37609578 37609637 -51894916 + AluSg/x SINE Alu 213 271 -38 330 211 28 0 chr17 37609637 37609746 -51894807 + GA-rich Low_complexity Low_complexity 1 112 0 1865 187 82 33 chr17 37609747 37610065 -51894488 + L1M4 LINE L1 4868 5215 -944 1806 145 3 53 chr17 37610065 37610383 -51894170 + AluJo SINE Alu 1 302 -10 1865 187 82 33 chr17 37610383 37610596 -51893957 + L1M4 LINE L1 5215 5416 -743 1434 178 0 35 chr17 37610610 37610868 -51893685 + AluJo SINE Alu 51 299 -13 1594 103 94 0 chr17 37611312 37611536 -51893017 - AluSq SINE Alu -68 245 1 2184 131 3 0 chr17 37612194 37612506 -51892047 + AluSq SINE Alu 1 313 0 912 132 0 0 chr17 37612526 37612647 -51891906 + FLAM_C SINE Alu 1 121 -22 383 296 53 7 chr17 37612811 37612963 -51891590 - MIR SINE MIR -21 241 83 2431 82 0 10 chr17 37613030 37613335 -51891218 + AluSq SINE Alu 1 302 -11 439 260 24 16 chr17 37613370 37613497 -51891056 + MER5B DNA MER1_type 50 177 -1 2332 110 0 0 chr17 37614206 37614507 -51890046 - AluSx SINE Alu -11 301 1 383 296 53 7 chr17 37614574 37614726 -51889827 + MIR SINE MIR 83 241 -21 517 229 114 53 chr17 37614971 37615015 -51889538 - L1ME4a LINE L1 -46 6075 6035 2107 112 10 7 chr17 37615015 37615311 -51889242 + AluSc SINE Alu 1 297 -12 517 229 114 53 chr17 37615311 37615528 -51889025 - L1ME4a LINE L1 -86 6035 5798 958 183 16 5 chr17 37615537 37615723 -51888830 - MER5A DNA MER1_type 0 189 2 1689 185 0 3 chr17 37615880 37616166 -51888387 - AluJb SINE Alu -25 287 3 2817 163 20 57 chr17 37616223 37616406 -51888147 + L1MA10 LINE L1 5736 5924 -410 2517 50 0 20 chr17 37616406 37616708 -51887845 - AluY SINE Alu -15 296 1 2817 163 20 57 chr17 37616708 37617136 -51887417 + L1MA10 LINE L1 5924 6324 -10 1837 169 0 23 chr17 37617136 37617443 -51887110 - AluJo SINE Alu -12 300 1 198 352 49 14 chr17 37617642 37617784 -51886769 - L2 LINE L2 -3 3310 3164 724 234 49 90 chr17 37617895 37618241 -51886312 + MER45C DNA AcHobo 118 449 -504 513 255 99 42 chr17 37618329 37618541 -51886012 + MER45C DNA AcHobo 394 617 -336 367 113 19 0 chr17 37618542 37618595 -51885958 + MER45C DNA AcHobo 900 953 0 476 187 0 37 chr17 37619692 37619799 -51884754 + MIR SINE MIR 150 252 -10 329 265 112 68 chr17 37620972 37621221 -51883332 + MLT1K LTR MaLR 278 537 -51 385 259 65 0 chr17 37621402 37621510 -51883043 - MIR SINE MIR -61 147 33 497 167 10 0 chr17 37622200 37622302 -51882251 + CT-rich Low_complexity Low_complexity 2 104 0 4533 43 0 2 chr17 37622302 37622875 -51881678 - L1PA3 LINE L1 0 6155 5598 2464 84 28 4 chr17 37623147 37623580 -51880973 - L1PA3 LINE L1 -561 5593 5156 386 349 74 0 chr17 37623915 37624064 -51880489 - L2 LINE L2 0 3272 3113 2266 102 7 0 chr17 37624693 37624996 -51879557 - AluSg SINE Alu -5 305 1 207 300 56 0 chr17 37625752 37625842 -51878711 + L2 LINE L2 3169 3263 -9 558 275 62 10 chr17 37626036 37626229 -51878324 - MIR SINE MIR -55 207 5 2123 106 0 31 chr17 37626239 37626559 -51877994 - AluSg SINE Alu 0 310 1 1231 176 147 7 chr17 37626800 37627107 -51877446 + MER69 DNA AcHobo 1937 2286 -240 2395 57 0 3 chr17 37627112 37627437 -51877116 - AluY SINE Alu 0 326 3 1894 165 16 3 chr17 37627449 37627770 -51876783 - L1PA16 LINE L1 -20 6146 5822 314 281 21 0 chr17 37628111 37628207 -51876346 - MIR SINE MIR -87 121 24 400 269 39 8 chr17 37629447 37629577 -51874976 + MIR3 SINE MIR 60 193 -15 2112 109 6 67 chr17 37629704 37630034 -51874519 + AluSg SINE Alu 1 310 0 561 273 10 68 chr17 37630440 37630645 -51873908 + MER91A DNA MER1_type 1 193 -3 338 247 53 146 chr17 37630914 37631161 -51873392 + L2 LINE L2 3031 3254 -18 1961 100 4 0 chr17 37632145 37632396 -51872157 + AluSg SINE Alu 46 297 -13 686 272 130 0 chr17 37633470 37633709 -51870844 - L2 LINE L2 -2025 1289 1020 1907 162 0 0 chr17 37633716 37634013 -51870540 - AluJb SINE Alu -13 299 3 375 284 28 0 chr17 37634076 37634185 -51870368 + MIR3 SINE MIR 47 158 -50 2388 86 0 6 chr17 37634311 37634343 -51870210 - AluY SINE Alu 0 311 280 189 0 0 0 chr17 37634343 37634364 -51870189 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2388 86 0 6 chr17 37634364 37634644 -51869909 - AluY SINE Alu -31 280 1 414 217 0 0 chr17 37634836 37634928 -51869625 + MER5A DNA MER1_type 13 104 -85 216 195 0 0 chr17 37635558 37635599 -51868954 - L2 LINE L2 -216 3056 3016 261 238 11 17 chr17 37635642 37635823 -51868730 + (CA)n Simple_repeat Simple_repeat 1 180 0 293 258 0 0 chr17 37635843 37635909 -51868644 + (CA)n Simple_repeat Simple_repeat 1 66 0 230 306 148 9 chr17 37637694 37637802 -51866751 - MIR3 SINE MIR -2 206 84 1701 200 18 98 chr17 37638048 37638524 -51866029 + L1MC3 LINE L1 7315 7749 -36 2506 61 0 0 chr17 37638524 37638818 -51865735 - AluY SINE Alu -17 294 1 1701 200 18 98 chr17 37638818 37638851 -51865702 + L1MC3 LINE L1 7749 7783 -2 2271 99 0 0 chr17 37638851 37639133 -51865420 - AluSq SINE Alu -31 282 1 265 125 0 0 chr17 37639133 37639181 -51865372 + L1MD3 LINE L1 7947 7994 -1 227 200 0 31 chr17 37639288 37639353 -51865200 + GA-rich Low_complexity Low_complexity 4 66 0 1729 181 7 3 chr17 37639407 37639700 -51864853 + AluJb SINE Alu 1 294 -18 1865 157 36 83 chr17 37639713 37640158 -51864395 + L1MB7 LINE L1 5748 6171 -13 251 346 106 0 chr17 37640263 37640367 -51864186 + L2 LINE L2 3140 3254 -18 1368 163 117 4 chr17 37640441 37640737 -51863816 - AluJo SINE Alu 0 325 1 181 307 59 10 chr17 37641661 37641762 -51862791 + MIR SINE MIR 127 232 -30 553 139 150 139 chr17 37642475 37642516 -51862037 + MER53 DNA DNA 1 40 -149 2387 94 0 0 chr17 37642516 37642815 -51861738 + AluSg SINE Alu 1 299 -11 553 139 150 139 chr17 37642815 37642960 -51861593 + MER53 DNA DNA 40 189 0 1801 78 4 16 chr17 37644135 37644377 -51860176 + AluSq SINE Alu 1 239 -74 703 56 11 0 chr17 37644378 37644468 -51860085 + AluSg/x SINE Alu 201 291 -21 387 237 127 25 chr17 37645046 37645164 -51859389 - MIR SINE MIR -122 140 11 2256 87 10 3 chr17 37645198 37645487 -51859066 + AluSc SINE Alu 1 291 -18 309 340 84 37 chr17 37645715 37646036 -51858517 - L2 LINE L2 -338 2976 2641 570 246 54 6 chr17 37646152 37646319 -51858234 - HAL1 LINE L1 -758 1749 1575 6142 147 37 25 chr17 37646344 37648127 -51856426 + L1PB2 LINE L1 4357 6144 -7 413 121 0 30 chr17 37648137 37648203 -51856350 - HAL1 LINE L1 -917 1590 1527 518 276 107 5 chr17 37648276 37648472 -51856081 + L2 LINE L2 2865 3080 -233 22 0 0 0 chr17 37648490 37648512 -51856041 + AT_rich Low_complexity Low_complexity 1 22 0 776 141 47 8 chr17 37648532 37648660 -51855893 + FLAM_A SINE Alu 1 133 0 1110 260 55 33 chr17 37648742 37649466 -51855087 + L1ME3A LINE L1 4931 5681 -481 1755 188 47 52 chr17 37649566 37649608 -51854945 + L1ME3A LINE L1 5694 5735 -435 2500 85 3 0 chr17 37649608 37649915 -51854638 + AluSp SINE Alu 1 308 -5 1755 188 47 52 chr17 37649915 37650361 -51854192 + L1ME3A LINE L1 5735 6163 -7 2755 125 9 24 chr17 37650535 37650905 -51853648 + L1MB4 LINE L1 5454 5817 -363 2383 102 0 0 chr17 37650905 37651209 -51853344 + AluY SINE Alu 2 305 -6 2755 125 9 24 chr17 37651209 37651293 -51853260 + L1MB4 LINE L1 5817 5901 -279 739 259 94 43 chr17 37651293 37651621 -51852932 - L1M4 LINE L1 -1236 4910 4566 309 236 28 0 chr17 37651649 37651721 -51852832 - MIR SINE MIR -112 150 77 819 127 56 0 chr17 37652054 37652180 -51852373 + FLAM_C SINE Alu 1 133 0 2119 97 0 0 chr17 37652204 37652473 -51852080 - AluY SINE Alu -16 295 27 2419 79 26 3 chr17 37652524 37652827 -51851726 - AluSg SINE Alu 0 310 1 313 301 115 6 chr17 37653007 37653163 -51851390 + MLT1K LTR MaLR 23 195 -393 4296 123 13 0 chr17 37653656 37654283 -51850270 + MER41B LTR ERV1 1 635 0 180 0 0 0 chr17 37654545 37654565 -51849988 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 6354 99 30 0 chr17 37654565 37655564 -51848989 - L1PA10 LINE L1 -21 6147 5123 * 13808 121 9 3 chr17 37655561 37657670 -51846883 + L1P LINE L1 2514 4636 -1510 11295 112 18 42 chr17 37658042 37658716 -51845837 - Tigger1 DNA MER2_type -637 1781 1092 2188 97 0 10 chr17 37658716 37659014 -51845539 + AluSg1 SINE Alu 15 309 0 11295 112 18 42 chr17 37659014 37660141 -51844412 - Tigger1 DNA MER2_type -1326 1092 24 241 330 97 0 chr17 37660179 37660282 -51844271 + L2 LINE L2 3144 3256 -16 186 133 17 50 chr17 37660340 37660400 -51844153 + T-rich Low_complexity Low_complexity 2 59 0 1190 173 0 0 chr17 37660673 37660864 -51843689 + AluJo SINE Alu 3 193 -119 2379 105 0 0 chr17 37660905 37661211 -51843342 - AluSx SINE Alu -5 307 2 364 148 16 0 chr17 37661221 37661282 -51843271 - MER5A DNA MER1_type -118 71 10 267 209 171 19 chr17 37661646 37661751 -51842802 - L2 LINE L2 -2 3311 3191 549 280 0 13 chr17 37662521 37662678 -51841875 + MIR SINE MIR 108 262 0 1347 164 0 9 chr17 37662829 37663049 -51841504 - AluJo SINE Alu -8 304 87 374 216 52 35 chr17 37663191 37663307 -51841246 - MIR3 SINE MIR -14 194 77 233 303 197 11 chr17 37663451 37663639 -51840914 + MIR SINE MIR 13 235 -27 469 280 100 35 chr17 37663890 37664151 -51840402 + L2 LINE L2 3032 3309 -4 317 143 0 16 chr17 37666205 37666268 -51838285 + (TC)n Simple_repeat Simple_repeat 1 62 0 3466 114 64 9 chr17 37667697 37668231 -51836322 + L1PA16 LINE L1 5604 6166 0 733 167 7 43 chr17 37668367 37668505 -51836048 - FLAM_C SINE Alu 0 133 1 23 0 0 0 chr17 37668518 37668541 -51836012 + AT_rich Low_complexity Low_complexity 1 23 0 242 250 31 0 chr17 37668585 37668649 -51835904 - L2 LINE L2 0 3313 3248 348 333 14 14 chr17 37669241 37669379 -51835174 + MIR3 SINE MIR 49 186 -22 * 515 280 43 38 chr17 37669352 37669538 -51835015 + L2 LINE L2 2904 3090 -182 3773 147 15 16 chr17 37669586 37670191 -51834362 - Tigger1 DNA MER2_type 0 2418 1815 272 207 17 0 chr17 37670817 37670875 -51833678 + MER20 DNA MER1_type 161 219 0 230 283 35 35 chr17 37671312 37671425 -51833128 + L2 LINE L2 2251 2363 -951 990 210 14 5 chr17 37671452 37671666 -51832887 + MER20 DNA MER1_type 4 219 0 783 274 128 16 chr17 37671689 37672252 -51832301 + L2 LINE L2 2708 3313 0 779 153 0 51 chr17 37672374 37672511 -51832042 - FLAM_A SINE Alu -3 130 1 2379 206 28 59 chr17 37672522 37672640 -51831913 - L1MB7 LINE L1 -11 6173 6053 2226 131 0 3 chr17 37672640 37672953 -51831600 - AluSx SINE Alu 0 312 1 2379 206 28 59 chr17 37672953 37673315 -51831238 - L1MB7 LINE L1 -131 6053 5723 2027 121 46 26 chr17 37673315 37673621 -51830932 + AluSx SINE Alu 1 312 0 2379 206 28 59 chr17 37673621 37673846 -51830707 - L1MB7 LINE L1 -461 5723 5493 415 204 46 28 chr17 37673953 37674061 -51830492 + MER5B DNA MER1_type 55 164 -14 208 245 0 0 chr17 37675337 37675386 -51829167 + MIR3 SINE MIR 140 188 -20 2524 67 0 0 chr17 37675402 37675702 -51828851 - AluY SINE Alu -11 300 1 1607 122 45 4 chr17 37675708 37675954 -51828599 - AluSx SINE Alu -23 289 34 316 229 35 27 chr17 37676143 37676294 -51828259 + MIR3 SINE MIR 11 160 -62 2385 75 0 3 chr17 37676364 37676657 -51827896 - AluY SINE Alu -14 297 6 645 190 16 0 chr17 37676692 37676813 -51827740 + AluSg/x SINE Alu 187 309 -1 384 97 0 0 chr17 37676813 37676875 -51827678 + (GGAA)n Simple_repeat Simple_repeat 1 62 0 609 222 96 0 chr17 37676878 37677013 -51827540 - LTR16C LTR ERVL -51 440 293 204 241 130 28 chr17 37677442 37677550 -51827003 + MIR SINE MIR 128 246 -16 864 115 0 0 chr17 37678269 37678391 -51826162 - L1MB1 LINE L1 -296 5893 5772 304 240 171 0 chr17 37678391 37678520 -51826033 + L1ME4a LINE L1 5754 5904 -217 188 259 86 12 chr17 37678737 37678818 -51825735 - MIR SINE MIR -79 129 43 265 289 134 7 chr17 37679159 37679301 -51825252 - MIR SINE MIR -56 206 47 217 310 163 8 chr17 37679746 37679875 -51824678 - MIR3 SINE MIR -17 191 43 978 102 5 133 chr17 37680737 37680933 -51823620 + AluJb SINE Alu 1 171 -141 705 191 67 52 chr17 37680965 37681159 -51823394 + AluJb SINE Alu 97 293 -19 434 250 83 8 chr17 37681228 37681360 -51823193 - MIR SINE MIR -75 187 46 317 269 245 18 chr17 37681507 37681793 -51822760 - L2 LINE L2 -159 3154 2804 1388 158 90 43 chr17 37681797 37682075 -51822478 - AluJo SINE Alu -16 296 6 239 216 0 0 chr17 37682082 37682133 -51822420 - L2 LINE L2 -515 2799 2749 2404 90 0 0 chr17 37682556 37682855 -51821698 - AluSx SINE Alu -13 299 1 260 136 0 0 chr17 37682991 37683035 -51821518 - L2 LINE L2 -3 3310 3267 2119 40 0 0 chr17 37683206 37683453 -51821100 + L1PA3 LINE L1 5906 6152 -3 32 57 0 0 chr17 37683453 37683506 -51821047 + AT_rich Low_complexity Low_complexity 1 53 0 2176 129 0 0 chr17 37683652 37683946 -51820607 - AluSg SINE Alu -16 294 1 1101 120 13 0 chr17 37684536 37684694 -51819859 + AluSc SINE Alu 140 299 -10 825 166 79 79 chr17 37684694 37684917 -51819636 + L1ME LINE L1 5280 5505 -659 1591 187 53 0 chr17 37684917 37685200 -51819353 + AluJb SINE Alu 1 298 -14 825 166 79 79 chr17 37685200 37685241 -51819312 + L1ME LINE L1 5504 5544 -620 337 288 214 41 chr17 37685242 37685357 -51819196 + L2 LINE L2 2886 2980 -333 2062 140 0 0 chr17 37685357 37685649 -51818904 - AluJb SINE Alu -14 298 7 337 288 214 41 chr17 37685649 37685665 -51818888 + L2 LINE L2 2980 2992 -321 2324 83 10 3 chr17 37685665 37685955 -51818598 - AluSc SINE Alu -17 292 1 337 288 214 41 chr17 37685955 37686187 -51818366 + L2 LINE L2 2992 3313 0 32 75 0 0 chr17 37686480 37686547 -51818006 + AT_rich Low_complexity Low_complexity 1 67 0 709 164 0 86 chr17 37686795 37686935 -51817618 - FLAM_A SINE Alu -5 128 1 2159 95 42 0 chr17 37686960 37687244 -51817309 + AluSx SINE Alu 1 296 -16 2376 84 0 0 chr17 37687312 37687608 -51816945 + AluY SINE Alu 1 296 -15 2411 92 0 13 chr17 37687852 37688168 -51816385 + AluSx SINE Alu 1 312 0 243 125 0 0 chr17 37688541 37688581 -51815972 + (CA)n Simple_repeat Simple_repeat 2 41 0 3383 158 42 54 chr17 37688691 37689622 -51814931 - MER21A LTR ERV1 -18 913 73 380 219 2 0 chr17 37689722 37689804 -51814749 - MER21A LTR ERV1 -780 83 1 833 165 0 0 chr17 37689830 37689963 -51814590 - FLAM_C SINE Alu 0 133 1 487 183 10 67 chr17 37691310 37691414 -51813139 + FLAM_C SINE Alu 21 118 -25 207 0 0 0 chr17 37691421 37691444 -51813109 + (CAAGA)n Simple_repeat Simple_repeat 3 25 0 216 171 0 43 chr17 37691729 37691799 -51812754 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 1804 161 18 11 chr17 37691846 37692125 -51812428 + AluJo SINE Alu 1 281 -31 1855 91 0 24 chr17 37692125 37692377 -51812176 - AluSc SINE Alu -8 301 55 1733 92 4 0 chr17 37692478 37692705 -51811848 + AluSg/x SINE Alu 65 292 -20 2163 120 3 3 chr17 37692715 37693015 -51811538 + AluSx SINE Alu 1 300 -12 930 159 29 12 chr17 37693033 37693203 -51811350 + AluSg/x SINE Alu 118 290 -20 295 287 152 24 chr17 37693215 37693379 -51811174 + L1ME1 LINE L1 5962 6146 -20 23 33 0 0 chr17 37693529 37693559 -51810994 + AT_rich Low_complexity Low_complexity 1 30 0 690 120 0 0 chr17 37693629 37693729 -51810824 - HY3 scRNA scRNA -1 100 1 2170 118 3 20 chr17 37693758 37694064 -51810489 + AluSx SINE Alu 1 301 -11 1967 104 83 0 chr17 37694203 37694481 -51810072 + AluSg SINE Alu 1 301 -9 2301 103 3 0 chr17 37694810 37695111 -51809442 + AluSp SINE Alu 1 302 -11 2316 164 5 16 chr17 37695392 37695763 -51808790 + Tigger7 DNA MER2_type 9 375 -2112 1675 161 27 14 chr17 37695796 37696088 -51808465 + AluJo SINE Alu 1 296 -16 2087 103 4 0 chr17 37696118 37696390 -51808163 + AluSp SINE Alu 1 273 -40 1065 130 16 22 chr17 37696491 37696676 -51807877 + AluSg/x SINE Alu 120 303 -7 2023 155 0 0 chr17 37696716 37697019 -51807534 + AluJo SINE Alu 1 303 -9 2069 145 0 3 chr17 37697019 37697329 -51807224 + AluSg SINE Alu 1 309 -1 1021 288 40 21 chr17 37697330 37697799 -51806754 + L1M4 LINE L1 2205 2682 -3464 1399 108 10 21 chr17 37697799 37697993 -51806560 - AluSg/x SINE Alu -13 297 106 402 181 45 75 chr17 37698011 37698057 -51806496 + L1MD1 LINE L1 5317 5363 -996 687 160 0 0 chr17 37698057 37698163 -51806390 + U6 snRNA snRNA 2 107 0 402 181 45 75 chr17 37698163 37698249 -51806304 + L1MD1 LINE L1 5363 5445 -914 977 189 136 45 chr17 37698257 37698525 -51806028 + AluJo SINE Alu 21 310 0 1026 196 129 81 chr17 37698527 37698787 -51805766 + L1MD1 LINE L1 5433 5679 -563 1864 129 39 4 chr17 37698787 37699067 -51805486 - AluSx SINE Alu -22 290 1 1026 196 129 81 chr17 37699067 37699212 -51805341 + L1MD1 LINE L1 5679 6045 -197 284 95 0 0 chr17 37699211 37699253 -51805300 + L1M4c LINE L1 17 58 -6326 * 1914 83 4 0 chr17 37699253 37699493 -51805060 + AluSp SINE Alu 63 303 -10 2320 212 29 31 chr17 37699517 37699858 -51804695 + L1 LINE L1 4432 4773 -1373 2425 95 0 0 chr17 37699858 37700164 -51804389 + AluSp SINE Alu 2 307 -6 2320 212 29 31 chr17 37700164 37700411 -51804142 + L1 LINE L1 4773 5019 -1127 2376 79 7 0 chr17 37700423 37700726 -51803827 + AluSg SINE Alu 1 305 -5 386 349 74 0 chr17 37701355 37701504 -51803049 + L2 LINE L2 3113 3272 0 2463 84 27 7 chr17 37701828 37702272 -51802281 + L1PA8 LINE L1 5148 5593 -561 4635 45 2 10 chr17 37702544 37703123 -51801430 + L1PA8 LINE L1 5598 6171 -1 2415 69 3 0 chr17 37703256 37703559 -51800994 + AluY SINE Alu 1 304 -7 1383 74 11 11 chr17 37704146 37704336 -51800217 - AluSg/x SINE Alu -3 309 120 424 231 143 88 chr17 37704445 37704530 -51800023 + MER102a DNA MER1_type 74 153 -1264 2546 57 3 0 chr17 37704530 37704830 -51799723 + AluSp SINE Alu 1 301 -12 424 231 143 88 chr17 37704830 37704982 -51799571 + MER102a DNA MER1_type 153 324 -6 2363 109 0 0 chr17 37705115 37705419 -51799134 + AluSg SINE Alu 1 304 -6 2384 80 20 3 chr17 37705603 37705903 -51798650 - AluSx SINE Alu -7 305 1 1144 92 0 0 chr17 37706002 37706155 -51798398 - L1PA13 LINE L1 -14 6149 5997 312 289 11 0 chr17 37706242 37706332 -51798221 - L2 LINE L2 0 3272 3182 674 295 31 9 chr17 37706846 37707070 -51797483 + MIR SINE MIR 33 261 -1 241 222 56 0 chr17 37709440 37709512 -51795041 + MIR SINE MIR 117 192 -70 247 113 38 0 chr17 37709540 37709593 -51794960 - L1MB4 LINE L1 0 6180 6126 727 168 35 46 chr17 37709626 37709823 -51794730 - L1MB2 LINE L1 -49 6122 5928 2273 114 3 0 chr17 37710030 37710338 -51794215 - AluSx SINE Alu -3 309 1 909 248 23 5 chr17 37710652 37710870 -51793683 - MER58A DNA MER1_type 0 224 3 2068 132 0 0 chr17 37711063 37711386 -51793167 + AluSx SINE Alu 1 323 0 1909 120 0 0 chr17 37711389 37711647 -51792906 + AluSg SINE Alu 40 297 -13 205 328 0 0 chr17 37711686 37711750 -51792803 + MER5A DNA MER1_type 35 98 -91 385 343 0 0 chr17 37711793 37711930 -51792623 + MIR SINE MIR 49 185 -77 595 259 79 46 chr17 37714635 37714940 -51789613 + L1ME4a LINE L1 5582 5896 -225 522 214 107 25 chr17 37716216 37716375 -51788178 - MER5A DNA MER1_type -7 182 11 2505 68 0 16 chr17 37716502 37716809 -51787744 + AluY SINE Alu 1 302 -9 2325 109 0 3 chr17 37717182 37717493 -51787060 + AluSg SINE Alu 1 310 0 405 0 0 0 chr17 37718078 37718123 -51786430 + (TG)n Simple_repeat Simple_repeat 1 45 0 312 266 55 85 chr17 37718358 37718557 -51785996 - L1ME4a LINE L1 -40 6081 5889 360 264 63 75 chr17 37718654 37718893 -51785660 - L1ME4a LINE L1 -1989 5819 5584 273 237 41 31 chr17 37719297 37719394 -51785159 - MER5B DNA MER1_type 0 178 81 433 301 7 14 chr17 37719591 37719737 -51784816 + MIR SINE MIR 70 214 -48 33 43 0 0 chr17 37720267 37720314 -51784239 + AT_rich Low_complexity Low_complexity 1 47 0 2151 110 17 3 chr17 37722248 37722548 -51782005 + AluSp SINE Alu 1 304 -9 338 239 90 75 chr17 37723046 37723301 -51781252 + L1ME4a LINE L1 5841 6099 -22 1311 142 21 29 chr17 37723409 37723648 -51780905 + Tigger7 DNA MER2_type 2255 2491 0 181 271 61 83 chr17 37723686 37723777 -51780776 - L2 LINE L2 -5 3308 3221 2216 92 13 23 chr17 37723777 37724080 -51780473 - AluSq SINE Alu -13 300 1 181 271 61 83 chr17 37724080 37724169 -51780384 - L2 LINE L2 -92 3221 3132 407 237 53 18 chr17 37724175 37724289 -51780264 + MIR SINE MIR 13 130 -132 1793 176 27 0 chr17 37724898 37725199 -51779354 + AluJo SINE Alu 1 309 -3 1763 143 40 4 chr17 37725400 37725673 -51778880 + AluSg SINE Alu 1 283 -27 25 0 0 0 chr17 37725673 37725698 -51778855 + AT_rich Low_complexity Low_complexity 1 25 0 22 56 0 0 chr17 37725765 37725801 -51778752 + AT_rich Low_complexity Low_complexity 1 36 0 2324 83 20 7 chr17 37726230 37726531 -51778022 + AluSx SINE Alu 1 305 -7 527 146 16 16 chr17 37726639 37726762 -51777791 + GA-rich Low_complexity Low_complexity 2 124 0 368 350 40 48 chr17 37727457 37727728 -51776825 + L2 LINE L2 2379 2648 -666 1988 133 3 17 chr17 37727728 37728030 -51776523 - AluSx SINE Alu -14 298 1 368 350 40 48 chr17 37728030 37728129 -51776424 + L2 LINE L2 2648 2746 -568 1941 122 16 50 chr17 37728457 37728777 -51775776 - AluSx SINE Alu -2 310 2 790 266 19 0 chr17 37728954 37729161 -51775392 + MIR SINE MIR 31 241 -21 181 109 43 0 chr17 37729638 37729684 -51774869 + (TA)n Simple_repeat Simple_repeat 1 48 0 1860 152 3 3 chr17 37729684 37730001 -51774552 - AluSx SINE Alu 0 317 1 210 303 15 0 chr17 37730086 37730152 -51774401 + L2 LINE L2 3239 3305 -8 2469 104 155 21 chr17 37730458 37730946 -51773607 + LTR61 LTR ERV1 2 595 0 252 228 0 0 chr17 37731424 37731481 -51773072 + MIR SINE MIR 82 138 -70 256 309 17 101 chr17 37732053 37732231 -51772322 - L2 LINE L2 -88 3184 3022 1068 57 0 7 chr17 37733272 37733412 -51771141 - L1PA15 LINE L1 -3 6162 6024 3309 158 4 13 chr17 37733517 37734388 -51770165 - L1P4 LINE L1 -578 5587 4728 1579 179 0 44 chr17 37734723 37735078 -51769475 - AluJb SINE Alu 0 342 1 464 261 56 81 chr17 37735362 37735596 -51768957 + MIR SINE MIR 20 247 -15 340 301 121 12 chr17 37736509 37736675 -51767878 + MIR3 SINE MIR 16 199 -9 187 339 18 9 chr17 37737355 37737464 -51767089 + L3 LINE CR1 1292 1401 -176 353 175 38 12 chr17 37738148 37738228 -51766325 - MIR SINE MIR -86 176 95 247 349 28 0 chr17 37738375 37738481 -51766072 + MIR SINE MIR 74 182 -80 222 256 154 0 chr17 37738534 37738612 -51765941 + MIR SINE MIR 108 197 -65 408 264 82 33 chr17 37738822 37739004 -51765549 - MIR3 SINE MIR -4 204 14 881 123 38 85 chr17 37739344 37739555 -51764998 - MER3 DNA MER1_type -4 205 5 1906 173 102 48 chr17 37739722 37740201 -51764352 + MLT1D LTR MaLR 1 505 0 336 269 0 0 chr17 37741489 37741567 -51762986 - MER2 DNA MER2_type 0 345 268 1711 152 3 14 chr17 37741692 37741988 -51762565 + L1PB4 LINE L1 5861 6153 -3 2119 121 0 0 chr17 37742136 37742417 -51762136 + AluSg SINE Alu 1 281 -29 187 104 42 0 chr17 37742418 37742466 -51762087 + (CA)n Simple_repeat Simple_repeat 1 50 0 376 192 8 108 chr17 37742486 37742606 -51761947 - L1MC/D LINE L1 -446 5865 5758 427 163 0 25 chr17 37743312 37743392 -51761161 + AluJb SINE Alu 160 237 -75 412 267 111 6 chr17 37743828 37744008 -51760545 + MIR SINE MIR 15 213 -49 1569 203 33 3 chr17 37744040 37744341 -51760212 - AluJb SINE Alu -2 310 1 2513 85 0 0 chr17 37746739 37747045 -51757508 + AluSc SINE Alu 1 306 -3 913 277 127 3 chr17 37747358 37747665 -51756888 - MLT1H1 LTR MaLR -201 354 10 1519 204 152 18 chr17 37747703 37748145 -51756408 - MLT1D LTR MaLR -4 501 1 1040 229 33 33 chr17 37748205 37748537 -51756016 - L1MC/D LINE L1 -765 5450 5119 559 209 0 0 chr17 37748540 37748650 -51755903 - AluSg/x SINE Alu -3 307 198 426 235 25 0 chr17 37748749 37748868 -51755685 - L1MC/D LINE L1 -1137 5078 4957 225 316 44 37 chr17 37748869 37749005 -51755548 - L1MC/D LINE L1 -2572 3643 3507 1769 288 37 61 chr17 37749037 37749787 -51754766 + HERV16 LTR ERVL 821 1552 -3444 * 1830 278 55 48 chr17 37749785 37750360 -51754193 + HERV16 LTR ERVL 2202 2784 -2212 2444 97 3 0 chr17 37750360 37750671 -51753882 + AluSp SINE Alu 1 312 -1 1830 278 55 48 chr17 37750671 37750808 -51753745 + HERV16 LTR ERVL 2784 2919 -2077 230 270 40 0 chr17 37750809 37750883 -51753670 + L1ME LINE L1 4758 4834 -1312 1211 206 97 77 chr17 37750890 37751293 -51753260 + MLT2B1 LTR ERVL 110 520 0 633 260 43 25 chr17 37751322 37751557 -51752996 + L1ME LINE L1 4925 5163 -983 411 316 51 0 chr17 37752866 37753062 -51751491 - L1MC/D LINE L1 -4594 1802 1597 377 303 43 19 chr17 37754902 37755044 -51749509 + L1ME LINE L1 5583 5731 -390 2199 135 0 0 chr17 37755044 37755341 -51749212 + AluSx SINE Alu 1 297 -15 377 303 43 19 chr17 37755341 37755360 -51749193 + L1ME LINE L1 5731 5748 -373 1951 184 17 14 chr17 37755461 37755808 -51748745 + MER7A DNA MER2_type 1 346 0 374 307 27 27 chr17 37756317 37756467 -51748086 + MLT1L LTR MaLR 342 491 -124 1502 166 63 46 chr17 37756510 37756794 -51747759 - AluJo SINE Alu -23 289 1 1016 74 27 20 chr17 37757092 37757241 -51747312 + L1PA13 LINE L1 6014 6163 0 611 154 231 19 chr17 37759630 37759786 -51744767 + MER53 DNA DNA 1 189 0 848 198 12 12 chr17 37759917 37760089 -51744464 - MER5B DNA MER1_type -6 172 1 2290 131 39 152 chr17 37760443 37761029 -51743524 + MLT2B1 LTR ERVL 1 520 0 491 281 79 101 chr17 37761547 37761926 -51742627 - MLT1K LTR MaLR 0 588 217 1267 189 30 107 chr17 37761926 37762291 -51742262 + MER58B DNA MER1_type 1 337 -4 491 281 79 101 chr17 37762291 37762327 -51742226 - MLT1K LTR MaLR -371 217 182 2101 101 3 0 chr17 37762727 37763037 -51741516 - AluSq SINE Alu 0 311 1 410 250 0 10 chr17 37763574 37763670 -51740883 - MER94 DNA DNA 0 134 40 355 365 54 0 chr17 37763759 37763907 -51740646 + MER91A DNA MER1_type 39 194 -2 1673 164 3 14 chr17 37764170 37764462 -51740091 - AluJo SINE Alu -22 290 2 825 245 27 0 chr17 37764889 37765073 -51739480 - MER5A DNA MER1_type 0 189 1 361 254 84 15 chr17 37765079 37765290 -51739263 - MLT1J2 LTR MaLR -120 330 63 309 26 0 0 chr17 37765735 37765773 -51738780 + (TG)n Simple_repeat Simple_repeat 2 39 0 463 278 78 120 chr17 37766005 37766473 -51738080 - L1MC4a LINE L1 -5 6116 5677 1913 141 3 0 chr17 37766473 37766771 -51737782 - AluSx SINE Alu -13 299 1 463 278 78 120 chr17 37766771 37766893 -51737660 - L1MC4a LINE L1 -444 5677 5551 764 296 9 0 chr17 37767070 37767290 -51737263 - MER58A DNA MER1_type 0 224 3 1935 129 3 0 chr17 37767483 37767799 -51736754 + AluSx SINE Alu 1 317 0 440 343 0 0 chr17 37767950 37768087 -51736466 + MIR SINE MIR 49 185 -77 577 291 65 36 chr17 37770797 37771103 -51733450 + L1ME4a LINE L1 5582 5896 -225 182 222 37 37 chr17 37771306 37771360 -51733193 + L2 LINE L2 1581 1634 -1680 668 194 103 24 chr17 37772379 37772544 -51732009 - MER5A DNA MER1_type -1 188 11 2179 101 3 3 chr17 37773029 37773337 -51731216 + AluSg SINE Alu 1 308 -2 462 36 0 0 chr17 37773913 37773969 -51730584 + (TG)n Simple_repeat Simple_repeat 1 56 0 198 0 0 0 chr17 37773968 37773990 -51730563 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 394 263 82 120 chr17 37774209 37774701 -51729852 - L1ME4a LINE L1 -40 6081 5606 276 253 50 30 chr17 37775138 37775237 -51729316 - MER5B DNA MER1_type 0 178 78 517 337 20 25 chr17 37775374 37775576 -51728977 + MIR SINE MIR 13 213 -49 25 65 0 0 chr17 37776118 37776164 -51728389 + AT_rich Low_complexity Low_complexity 1 46 0 532 301 48 99 chr17 37778365 37778930 -51725623 + L1ME4a LINE L1 5578 6113 -8 697 302 40 9 chr17 37780410 37780632 -51723921 - MIR SINE MIR -1 261 33 188 150 75 25 chr17 37780664 37780704 -51723849 - MIR SINE MIR -64 198 157 311 322 11 0 chr17 37781145 37781235 -51723318 + L2 LINE L2 3182 3272 0 1083 112 0 0 chr17 37781322 37781474 -51723079 + L1PA13 LINE L1 5997 6148 -15 261 57 0 0 chr17 37781474 37781509 -51723044 + (CA)n Simple_repeat Simple_repeat 2 36 0 1995 108 27 3 chr17 37781588 37781885 -51722668 + AluSx SINE Alu 5 308 -4 828 71 47 24 chr17 37781987 37782156 -51722397 + GA-rich Low_complexity Low_complexity 2 174 0 364 355 82 57 chr17 37782820 37783121 -51721432 + L2 LINE L2 2352 2644 -670 1028 52 32 7 chr17 37783121 37783276 -51721277 + (TTTC)n Simple_repeat Simple_repeat 3 161 0 1783 135 0 21 chr17 37783278 37783566 -51720987 - AluSx SINE Alu -30 282 1 364 355 82 57 chr17 37783566 37783749 -51720804 + L2 LINE L2 2644 2851 -463 2081 98 3 46 chr17 37783983 37784309 -51720244 - AluSx SINE Alu 0 312 1 830 297 18 4 chr17 37784484 37784713 -51719840 + MIR SINE MIR 31 262 0 278 261 31 46 chr17 37784845 37784975 -51719578 + L1ME4a LINE L1 5715 5842 -279 343 228 59 20 chr17 37785065 37785166 -51719387 + L1ME4a LINE L1 6013 6117 -4 2135 114 0 3 chr17 37785180 37785477 -51719076 - AluSx SINE Alu -16 296 1 231 306 0 0 chr17 37785563 37785625 -51718928 + L2 LINE L2 3244 3305 -8 254 284 147 0 chr17 37786326 37786421 -51718132 + MIR SINE MIR 30 138 -70 288 320 22 90 chr17 37786984 37787162 -51717391 - L2 LINE L2 -79 3193 3028 217 238 238 10 chr17 37787732 37787833 -51716720 + L2 LINE L2 3144 3267 -5 6767 78 3 22 chr17 37788213 37789673 -51714880 - L1PA15 LINE L1 -3 6162 4728 1451 196 11 4 chr17 37790008 37790323 -51714230 - AluJb SINE Alu 0 317 1 588 272 86 39 chr17 37790596 37790828 -51713725 + MIR SINE MIR 5 247 -15 408 301 121 12 chr17 37791740 37791906 -51712647 + MIR3 SINE MIR 16 199 -9 282 293 24 24 chr17 37792576 37792699 -51711854 + L3 LINE CR1 1292 1414 -163 375 292 39 67 chr17 37793262 37793440 -51711113 - MIR SINE MIR 0 262 90 340 335 105 7 chr17 37793570 37793722 -51710831 + MIR SINE MIR 63 229 -33 245 269 154 0 chr17 37793741 37793819 -51710734 + MIR SINE MIR 108 197 -65 450 269 77 28 chr17 37794025 37794207 -51710346 - MIR3 SINE MIR -4 204 14 1054 138 24 48 chr17 37794543 37794753 -51709800 - MER3 DNA MER1_type 0 209 5 1896 177 97 40 chr17 37794923 37795398 -51709155 + MLT1D LTR MaLR 4 505 0 1188 188 140 45 chr17 37796685 37796770 -51707783 - MER2 DNA MER2_type 0 345 270 1606 186 13 3 chr17 37796770 37797076 -51707477 + AluJo SINE Alu 1 309 -3 1188 188 140 45 chr17 37797076 37797304 -51707249 - MER2 DNA MER2_type -75 270 2 191 275 50 50 chr17 37797624 37797704 -51706849 - MIR SINE MIR -8 254 175 1928 167 3 0 chr17 37797709 37798026 -51706527 + 7SLRNA srpRNA srpRNA 3 320 0 332 149 75 0 chr17 37798050 37798117 -51706436 - MIR SINE MIR -84 178 107 495 240 68 36 chr17 37798699 37798943 -51705610 + MER41B LTR ERV1 53 430 -205 1700 95 32 17 chr17 37799051 37799397 -51705156 + MLT2A1 LTR ERVL 1 444 0 6980 119 17 35 chr17 37799397 37800771 -51703782 + HERVL-A1-A1 LTR ERVL 1 1352 -4412 * 17793 58 17 0 chr17 37800769 37802906 -51701647 + HERVL-A1-A1 LTR ERVL 2491 4663 -991 3913 60 6 23 chr17 37802903 37803422 -51701131 + HERVL-A1-A1 LTR ERVL 5145 5654 0 * 3029 80 57 7 chr17 37803422 37803804 -51700749 + MLT2A1 LTR ERVL 1 407 -37 355 52 35 0 chr17 37803804 37803862 -51700691 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 3029 80 57 7 chr17 37803862 37803902 -51700651 + MLT2A1 LTR ERVL 407 444 0 189 0 0 0 chr17 37805201 37805222 -51699331 + (A)n Simple_repeat Simple_repeat 1 21 0 3699 118 8 2 chr17 37806548 37807072 -51697481 + MER1A DNA MER1_type 1 527 0 2723 145 7 0 chr17 37807093 37807534 -51697019 - L1PB3 LINE L1 0 6154 5711 6998 66 7 9 chr17 37808102 37809203 -51695350 + L1PA8 LINE L1 5074 6172 0 202 248 191 19 chr17 37809410 37809515 -51695038 - MIR SINE MIR -127 135 13 3613 65 2 0 chr17 37809636 37810079 -51694474 - MLT2A1 LTR ERVL 0 444 1 265 317 61 20 chr17 37811044 37811197 -51693356 + MIR SINE MIR 103 261 -1 618 293 60 57 chr17 37811511 37811831 -51692722 + L1ME4a LINE L1 5480 5804 -317 1520 170 21 21 chr17 37811831 37812114 -51692439 - AluJb SINE Alu -23 289 7 618 293 60 57 chr17 37812114 37812322 -51692231 + L1ME4a LINE L1 5804 6010 -111 394 254 14 72 chr17 37812713 37812851 -51691702 - LTR28 LTR ERV1 -29 1726 1597 2324 181 33 41 chr17 37812851 37813669 -51690884 - LTR28 LTR ERV1 -141 495 1 2224 117 0 0 chr17 37813930 37814238 -51690315 - AluSg SINE Alu -2 308 1 14927 124 32 28 chr17 37816382 37818452 -51686101 + Tigger1 DNA MER2_type 1 2083 -335 1957 149 0 0 chr17 37818452 37818760 -51685793 + AluSx SINE Alu 5 312 0 14927 124 32 28 chr17 37818760 37819098 -51685455 + Tigger1 DNA MER2_type 2083 2418 0 724 319 44 34 chr17 37819496 37819906 -51684647 + ERVL LTR ERVL 2481 2894 -2870 1001 330 87 18 chr17 37819947 37820453 -51684100 + ERVL LTR ERVL 3081 3621 -2143 686 295 38 53 chr17 37821132 37821560 -51682993 - ERVL LTR ERVL -324 5330 4966 21 0 0 0 chr17 37821867 37821888 -51682665 + AT_rich Low_complexity Low_complexity 1 21 0 2132 113 0 7 chr17 37822069 37822371 -51682182 + AluSx SINE Alu 3 302 -10 1062 223 40 80 chr17 37823404 37823731 -51680822 - LTR53 LTR ERVL -14 505 192 241 330 119 32 chr17 37824732 37824950 -51679603 - L2 LINE L2 -93 3179 2943 2171 121 45 22 chr17 37825639 37825995 -51678558 - THE1B LTR MaLR 0 364 1 1940 109 0 0 chr17 37826082 37826348 -51678205 + AluSx SINE Alu 1 266 -46 1448 219 33 12 chr17 37826400 37826733 -51677820 + MER58B DNA MER1_type 1 340 -1 30 0 0 0 chr17 37826857 37826887 -51677666 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr17 37827095 37827115 -51677438 + (TAGA)n Simple_repeat Simple_repeat 3 22 0 1871 159 0 6 chr17 37827237 37827551 -51677002 - AluJb SINE Alu 0 312 1 8232 41 1 4 chr17 37827602 37828574 -51675979 + LTR5 LTR ERVK 1 969 0 1210 218 17 3 chr17 37829626 37829924 -51674629 + L1M4 LINE L1 4485 4786 -1360 2142 93 0 13 chr17 37830206 37830508 -51674045 - AluY SINE Alu -13 298 1 259 294 49 68 chr17 37831265 37831428 -51673125 + ERVL LTR ERVL 876 1035 -4729 268 215 11 11 chr17 37831512 37831605 -51672948 + GA-rich Low_complexity Low_complexity 1 93 0 1459 323 27 13 chr17 37831606 37832203 -51672350 + ERVL LTR ERVL 1709 2313 -3451 2132 191 0 3 chr17 37832252 37832618 -51671935 - MLT1A1 LTR MaLR 0 365 1 2789 207 11 26 chr17 37832681 37833252 -51671301 + MER68 LTR ERV1 1 562 0 1560 218 30 22 chr17 37833763 37834125 -51670428 - MLT1A1 LTR MaLR 0 365 1 752 190 112 34 chr17 37834126 37834305 -51670248 + L1PB4 LINE L1 5964 6156 0 356 109 0 0 chr17 37834333 37834388 -51670165 + AluSp/q SINE Alu 249 303 0 1756 244 108 15 chr17 37834406 37835062 -51669491 - L1M4 LINE L1 -1053 5093 4377 364 342 21 58 chr17 37835623 37835813 -51668740 - L1MC4a LINE L1 -1890 5918 5736 634 141 26 128 chr17 37835907 37836063 -51668490 - FLAM_A SINE Alu -2 140 1 255 270 102 0 chr17 37836354 37836492 -51668061 - MIR SINE MIR -10 252 98 392 287 74 16 chr17 37836776 37836898 -51667655 - MIR SINE MIR -72 190 62 636 246 88 29 chr17 37837344 37837584 -51666969 + MIR SINE MIR 2 255 -7 296 282 16 48 chr17 37837643 37837767 -51666786 + MIR SINE MIR 3 122 -140 1919 159 0 0 chr17 37838176 37838485 -51666068 + AluSx SINE Alu 1 309 -3 457 293 38 8 chr17 37838505 37838638 -51665915 - MIR SINE MIR -86 176 40 406 294 85 45 chr17 37838711 37839039 -51665514 - L1MC4a LINE L1 -224 5897 5575 446 323 175 0 chr17 37839082 37839299 -51665254 - MIR SINE MIR -5 257 3 22 80 0 0 chr17 37839391 37839441 -51665112 + AT_rich Low_complexity Low_complexity 1 50 0 324 250 69 0 chr17 37841346 37841418 -51663135 - MER91A DNA MER1_type -1 195 119 425 366 41 0 chr17 37841427 37841599 -51662954 - MER91A DNA MER1_type -17 179 1 245 261 64 34 chr17 37841665 37841775 -51662778 - MIR SINE MIR -63 145 46 231 271 233 15 chr17 37842285 37842418 -51662135 + MIR SINE MIR 31 192 -70 1750 117 0 29 chr17 37842645 37842919 -51661634 + AluSx SINE Alu 30 295 -17 467 299 104 0 chr17 37843055 37843219 -51661334 - MIR SINE MIR -19 243 63 293 261 107 52 chr17 37843335 37843645 -51660908 - L1ME4a LINE L1 -237 5884 5558 739 248 104 18 chr17 37843703 37843925 -51660628 - MIR SINE MIR -11 251 11 358 260 113 100 chr17 37844819 37845192 -51659361 - L1ME4a LINE L1 -23 6098 5715 1016 209 41 23 chr17 37845192 37845412 -51659141 - MER58A DNA MER1_type 0 224 1 358 260 113 100 chr17 37845412 37845558 -51658995 - L1ME4a LINE L1 -406 5715 5572 4121 167 58 24 chr17 37845847 37847132 -51657421 - L1MA9 LINE L1 -1 6311 4873 339 49 39 0 chr17 37847138 37847195 -51657358 - MER41A LTR ERV1 -76 478 418 300 242 0 0 chr17 37847195 37847261 -51657292 - L1ME4a LINE L1 -1261 4885 4820 451 303 21 14 chr17 37847261 37847406 -51657147 - MIR SINE MIR -97 165 20 551 217 17 0 chr17 37847416 37847536 -51657017 - MER20 DNA MER1_type 0 219 98 481 280 35 14 chr17 37847564 37847707 -51656846 - MIR SINE MIR -70 192 47 190 118 0 0 chr17 37848297 37848331 -51656222 + MIR SINE MIR 123 156 -106 1707 169 3 7 chr17 37848631 37848938 -51655615 + AluJo SINE Alu 1 306 -6 301 256 25 16 chr17 37851086 37851207 -51653346 - MER113 DNA MER1_type? -380 141 20 349 287 0 41 chr17 37851631 37851753 -51652800 + L2 LINE L2 2458 2574 -740 548 241 29 105 chr17 37852641 37852813 -51651740 + L1MD3 LINE L1 7705 7844 -151 1538 164 0 33 chr17 37852813 37853112 -51651441 - AluJo SINE Alu -23 289 1 548 241 29 105 chr17 37853112 37853254 -51651299 + L1MD3 LINE L1 7844 7995 0 200 229 115 0 chr17 37853560 37853621 -51650932 - L2 LINE L2 -343 2970 2903 1057 326 35 18 chr17 37858367 37859029 -51645524 - L1MC3 LINE L1 -1629 6156 5484 182 272 48 96 chr17 37863649 37863774 -51640779 - MIR SINE MIR -72 136 18 * 246 313 82 61 chr17 37863754 37863901 -51640652 + MIR SINE MIR 94 243 -19 1860 193 24 3 chr17 37864936 37865273 -51639280 - MER2 DNA MER2_type 0 344 1 330 26 0 0 chr17 37865592 37865631 -51638922 + (CTGGGG)n Simple_repeat Simple_repeat 3 41 0 1503 162 109 26 chr17 37865736 37866076 -51638477 - THE1C LTR MaLR -1 374 7 210 216 0 59 chr17 37866779 37866830 -51637723 + G-rich Low_complexity Low_complexity 1 48 0 258 116 0 0 chr17 37866889 37866932 -51637621 + (CCCCCA)n Simple_repeat Simple_repeat 4 46 0 272 231 20 7 chr17 37867258 37867405 -51637148 + GA-rich Low_complexity Low_complexity 2 150 0 600 244 0 0 chr17 37867921 37868101 -51636452 + (TG)n Simple_repeat Simple_repeat 1 180 0 2905 148 15 8 chr17 37868314 37868795 -51635758 - MER1A DNA MER1_type 0 529 46 627 198 25 0 chr17 37868989 37869110 -51635443 - MLT1C LTR MaLR 0 467 344 282 363 116 35 chr17 37869760 37870190 -51634363 + L2 LINE L2 944 1408 -1906 229 332 145 23 chr17 37870378 37870640 -51633913 + L2 LINE L2 1791 2084 -1230 355 267 78 0 chr17 37870655 37870745 -51633808 - MER117 DNA MER1_type -97 100 4 2209 103 0 0 chr17 37871123 37871425 -51633128 + AluSg SINE Alu 1 302 -8 641 205 0 0 chr17 37871585 37871697 -51632856 + FLAM_A SINE Alu 19 130 -12 1579 126 4 16 chr17 37871909 37872156 -51632397 - AluSx SINE Alu -5 307 64 2382 74 0 0 chr17 37872674 37872971 -51631582 + AluSc SINE Alu 1 297 -12 1401 170 76 24 chr17 37873003 37873292 -51631261 + AluJb SINE Alu 1 304 -8 2064 121 0 3 chr17 37874047 37874352 -51630201 + AluSg SINE Alu 1 304 -6 381 244 64 45 chr17 37874832 37874988 -51629565 + L1MC4 LINE L1 6811 6969 -1073 1549 199 6 10 chr17 37875046 37875358 -51629195 + AluJb SINE Alu 2 312 0 824 177 61 88 chr17 37875359 37875653 -51628900 + L1MC5 LINE L1 6906 7191 -770 627 205 139 12 chr17 37875668 37875834 -51628719 - MER20 DNA MER1_type 0 219 33 566 243 43 16 chr17 37875947 37876132 -51628421 + L1MC5 LINE L1 7311 7500 -461 918 198 86 0 chr17 37876233 37876430 -51628123 + AluJb SINE Alu 92 305 -7 2908 141 13 27 chr17 37876722 37877196 -51627357 + MLT1C LTR MaLR 1 467 0 2171 114 0 0 chr17 37877347 37877655 -51626898 + AluSg1 SINE Alu 1 308 -1 1339 132 0 10 chr17 37877697 37877901 -51626652 + AluSq SINE Alu 33 234 -79 593 160 20 0 chr17 37877903 37878003 -51626550 + AluJb SINE Alu 203 304 -8 2103 130 0 10 chr17 37878004 37878311 -51626242 + AluSg SINE Alu 1 304 -6 2087 124 0 16 chr17 37878321 37878635 -51625918 + AluSc SINE Alu 1 309 0 404 246 97 26 chr17 37878638 37878833 -51625720 + L1MC4a LINE L1 7034 7242 -566 2016 116 0 0 chr17 37878847 37879132 -51625421 + AluSx SINE Alu 16 300 -12 318 258 22 0 chr17 37879132 37879221 -51625332 + L1MC4 LINE L1 7811 7901 -141 1717 166 3 0 chr17 37879679 37879962 -51624591 + AluSx SINE Alu 12 295 -17 2343 80 0 0 chr17 37879964 37880265 -51624288 + AluY SINE Alu 1 301 -10 203 350 17 0 chr17 37880417 37880477 -51624076 + MIR SINE MIR 17 77 -185 227 267 122 76 chr17 37880480 37880611 -51623942 + MIR SINE MIR 44 180 -82 26 0 0 0 chr17 37880909 37880935 -51623618 + AT_rich Low_complexity Low_complexity 1 26 0 187 278 42 0 chr17 37881696 37881768 -51622785 + MIR SINE MIR 132 206 -56 1744 124 0 29 chr17 37881978 37882252 -51622301 + AluSx SINE Alu 30 295 -17 430 317 94 0 chr17 37882373 37882553 -51622000 - MIR SINE MIR -3 259 63 310 289 104 39 chr17 37882610 37882967 -51621586 - L1ME4a LINE L1 -167 5954 5575 687 254 94 9 chr17 37883039 37883263 -51621290 - MIR SINE MIR -11 251 9 345 290 97 77 chr17 37884158 37884528 -51620025 - L1ME4a LINE L1 -23 6098 5714 1063 214 41 23 chr17 37884528 37884748 -51619805 - MER58A DNA MER1_type 0 224 1 345 290 97 77 chr17 37884748 37884894 -51619659 - L1ME4a LINE L1 -407 5714 5572 346 217 108 0 chr17 37885195 37885225 -51619328 - L1MA9 LINE L1 0 6312 6283 551 299 62 75 chr17 37885225 37885281 -51619272 - L1MD2 LINE L1 -216 6143 6088 3929 167 57 25 chr17 37885281 37886475 -51618078 - L1MA9 LINE L1 -198 6114 4873 293 67 39 0 chr17 37886480 37886537 -51618016 - MER41A LTR ERV1 -76 478 418 311 227 0 0 chr17 37886537 37886603 -51617950 - L1MD2 LINE L1 -1261 4885 4820 2752 19 0 0 chr17 37886613 37886924 -51617629 - AluYb8 SINE Alu -7 311 1 444 310 14 7 chr17 37886924 37887069 -51617484 - MIR SINE MIR -97 165 20 556 217 17 0 chr17 37887079 37887199 -51617354 - MER20 DNA MER1_type 0 219 98 403 286 41 14 chr17 37887222 37887369 -51617184 - MIR SINE MIR -65 197 47 1756 169 3 7 chr17 37888293 37888600 -51615953 + AluJo SINE Alu 1 306 -6 309 276 24 16 chr17 37890740 37890867 -51613686 - MER113 DNA MER1_type? -380 141 14 367 287 0 41 chr17 37891285 37891407 -51613146 + L2 LINE L2 2458 2574 -740 524 248 29 105 chr17 37892295 37892467 -51612086 + L1MD3 LINE L1 7705 7844 -151 1664 157 0 27 chr17 37892467 37892766 -51611787 - AluJo SINE Alu -21 291 1 524 248 29 105 chr17 37892766 37892908 -51611645 + L1MD3 LINE L1 7844 7995 0 979 325 37 11 chr17 37898042 37898709 -51605844 - L1MC4 LINE L1 -1629 6156 5479 182 272 48 96 chr17 37903324 37903449 -51601104 - MIR SINE MIR -72 136 18 * 246 313 82 61 chr17 37903429 37903576 -51600977 + MIR SINE MIR 94 243 -19 1876 186 21 3 chr17 37904611 37904949 -51599604 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 37905028 37905053 -51599500 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 702 165 133 19 chr17 37905399 37905557 -51598996 - THE1C LTR MaLR 0 375 200 1872 89 4 0 chr17 37905559 37905807 -51598746 - AluSx SINE Alu -63 249 1 2149 90 3 23 chr17 37905814 37906124 -51598429 - AluSx SINE Alu -3 309 6 2223 90 13 0 chr17 37906137 37906438 -51598115 - AluSg SINE Alu -5 305 1 1088 137 12 0 chr17 37906794 37906962 -51597591 - AluSq SINE Alu -143 170 1 1072 221 42 35 chr17 37906963 37907252 -51597301 - L1MDa LINE L1 -6248 292 2 964 223 130 32 chr17 37907267 37907465 -51597088 - L1MEc LINE L1 -3019 3196 3019 194 62 31 0 chr17 37907465 37907497 -51597056 + (TTATG)n Simple_repeat Simple_repeat 4 36 0 1994 114 0 0 chr17 37907497 37907778 -51596775 - AluSg1 SINE Alu -28 281 1 964 223 130 32 chr17 37907778 37908084 -51596469 - L1MEc LINE L1 -3195 3020 2641 1954 119 0 0 chr17 37908084 37908361 -51596192 - AluSx SINE Alu -35 277 1 745 196 21 21 chr17 37908361 37908504 -51596049 - AluJo SINE Alu -168 144 2 634 279 18 14 chr17 37908509 37908794 -51595759 - L1MEc LINE L1 -3576 2639 2355 1207 190 62 65 chr17 37908852 37908996 -51595557 - AluJb SINE Alu -13 289 146 2227 87 7 0 chr17 37908996 37909295 -51595258 - AluSp SINE Alu -12 301 1 221 0 35 0 chr17 37909303 37909332 -51595221 + (TG)n Simple_repeat Simple_repeat 1 30 0 1207 190 62 65 chr17 37909332 37909468 -51595085 - AluJb SINE Alu -163 139 1 304 333 52 33 chr17 37909497 37909650 -51594903 - L1MEc LINE L1 -5028 1368 1213 2192 267 65 42 chr17 37909658 37910751 -51593802 - L1MEc LINE L1 -5235 1161 44 * 2261 224 121 57 chr17 37910747 37910994 -51593559 - L1ME LINE L1 -713 5520 5290 2198 33 44 0 chr17 37910994 37911313 -51593240 - AluY SINE Alu 0 331 1 2261 224 121 57 chr17 37911313 37912044 -51592509 - L1ME LINE L1 -943 5290 4422 1776 139 42 0 chr17 37912044 37912332 -51592221 - AluSx SINE Alu -12 300 1 2261 224 121 57 chr17 37912332 37912716 -51591837 - L1ME LINE L1 -1811 4422 4064 569 259 22 0 chr17 37912719 37912854 -51591699 - MER74A LTR ERVL 0 558 421 428 231 70 0 chr17 37912864 37913007 -51591546 - L1ME LINE L1 -2169 4046 3894 198 0 0 0 chr17 37913028 37913050 -51591503 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1366 130 49 37 chr17 37913060 37913306 -51591247 - AluSx SINE Alu -63 249 1 1001 274 95 39 chr17 37913309 37913848 -51590705 - L1ME LINE L1 -2365 3850 3260 4084 137 21 6 chr17 37913848 37914474 -51590079 - MER41B LTR ERV1 0 635 1 1001 274 95 39 chr17 37914474 37914649 -51589904 - L1ME LINE L1 -2955 3260 3096 608 48 24 0 chr17 37914649 37914732 -51589821 + (CATTT)n Simple_repeat Simple_repeat 3 87 0 1871 138 0 17 chr17 37914732 37915028 -51589525 - AluSx SINE Alu -21 291 1 604 256 170 28 chr17 37915033 37915428 -51589125 - L1ME LINE L1 -3320 2895 2445 1797 146 0 23 chr17 37915445 37915767 -51588786 - AluSx SINE Alu 0 312 1 241 302 52 0 chr17 37915768 37915884 -51588669 - L1ME LINE L1 -4003 2393 2272 2438 207 86 7 chr17 37915889 37916492 -51588061 - L1MB7 LINE L1 -108 6076 5426 2110 104 0 16 chr17 37916492 37916809 -51587744 - AluSx SINE Alu 0 312 1 1117 234 86 16 chr17 37916809 37917180 -51587373 - L1MB7 LINE L1 -814 5332 4936 1217 287 90 41 chr17 37917237 37918058 -51586495 - L1ME LINE L1 -4371 2025 1149 2216 94 7 3 chr17 37918058 37918365 -51586188 - AluSp SINE Alu -5 308 1 1217 287 90 41 chr17 37918365 37918498 -51586055 - L1ME LINE L1 -5247 1149 1024 311 130 0 0 chr17 37918498 37918552 -51586001 - Alu SINE Alu 0 300 247 1806 187 24 3 chr17 37919371 37919708 -51584845 - MER2 DNA MER2_type 0 344 1 330 26 0 0 chr17 37920027 37920066 -51584487 + (CTGGGG)n Simple_repeat Simple_repeat 3 41 0 1529 165 109 26 chr17 37920171 37920511 -51584042 - THE1C LTR MaLR -1 374 7 258 116 0 0 chr17 37921324 37921367 -51583186 + (CCCCCA)n Simple_repeat Simple_repeat 4 46 0 272 231 20 7 chr17 37921693 37921840 -51582713 + GA-rich Low_complexity Low_complexity 2 150 0 540 254 0 0 chr17 37922355 37922532 -51582021 + (TG)n Simple_repeat Simple_repeat 1 177 0 3198 146 0 8 chr17 37922747 37923235 -51581318 - MER1A DNA MER1_type 0 529 46 900 167 15 128 chr17 37923426 37923630 -51580923 - MLT1C LTR MaLR 0 467 210 225 170 64 0 chr17 37923630 37923677 -51580876 + MLT-int LTR MaLR 142 191 -1544 180 0 0 0 chr17 37924312 37924332 -51580221 + (TG)n Simple_repeat Simple_repeat 1 20 0 16927 68 14 1 chr17 37925650 37927722 -51576831 + HERVL LTR ERVL 2659 4757 -897 505 269 62 40 chr17 37927735 37927962 -51576591 - L1MC4a LINE L1 -227 5935 5702 287 143 0 0 chr17 37928013 37928062 -51576491 + L1M4 LINE L1 5238 5286 -860 1540 176 21 0 chr17 37928065 37928355 -51576198 + AluJb SINE Alu 2 297 -15 1381 124 0 0 chr17 37928465 37928659 -51575894 + AluSx SINE Alu 2 195 -117 628 213 22 7 chr17 37928670 37928806 -51575747 - MLT1C LTR MaLR -203 162 25 284 132 19 0 chr17 37928816 37928869 -51575684 + L1 LINE L1 5188 5241 -905 205 154 0 0 chr17 37928897 37928903 -51575650 + (TA)n Simple_repeat Simple_repeat 1 6 -33 1662 185 0 3 chr17 37928903 37929195 -51575358 + AluJb SINE Alu 1 291 -21 205 154 0 0 chr17 37929195 37929227 -51575326 + (TA)n Simple_repeat Simple_repeat 5 39 0 314 259 33 41 chr17 37929229 37929350 -51575203 + L1MC3 LINE L1 6550 6703 -1137 1101 92 0 29 chr17 37929356 37929530 -51575023 - Tigger7 DNA MER2_type -26 2461 2293 1405 99 0 0 chr17 37929533 37929725 -51574828 - AluSg/x SINE Alu -19 291 100 391 101 55 18 chr17 37930079 37930185 -51574368 + MLT2A1 LTR ERVL 198 400 -44 356 184 38 6 chr17 37930212 37930370 -51574183 + (TA)n Simple_repeat Simple_repeat 2 164 0 334 121 0 45 chr17 37930373 37930439 -51574114 + MLT2B1 LTR ERVL 458 520 0 10945 205 23 35 chr17 37930440 37932659 -51571894 + ERVL-B1 LTR ERVL 2 2194 -3570 371 121 0 17 chr17 37932821 37932879 -51571674 + MER66B LTR ERV1 291 347 -139 879 137 0 27 chr17 37932918 37933064 -51571489 + AluJo SINE Alu 1 142 -170 1835 73 4 0 chr17 37933066 37933298 -51571255 + AluSc SINE Alu 1 233 -76 243 0 0 0 chr17 37933314 37933341 -51571212 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2120 84 17 27 chr17 37933342 37933641 -51570912 + AluSp SINE Alu 1 296 -17 1982 93 44 0 chr17 37934194 37934488 -51570065 + AluSg SINE Alu 1 306 0 209 291 89 0 chr17 37934511 37934590 -51569963 + MIR SINE MIR 109 194 -68 1425 175 49 3 chr17 37935280 37935565 -51568988 - AluJb SINE Alu -14 298 1 2220 62 31 0 chr17 37936572 37936862 -51567691 + AluSx SINE Alu 1 299 -13 1043 121 0 6 chr17 37936909 37937074 -51567479 + AluSc SINE Alu 135 298 -11 505 297 8 0 chr17 37937155 37937273 -51567280 - MIR SINE MIR -134 128 10 185 143 0 0 chr17 37937776 37937804 -51566749 + MIR SINE MIR 116 143 -65 464 182 83 55 chr17 37938173 37938354 -51566199 + MER53 DNA DNA 3 188 -1 405 321 89 21 chr17 37938507 37938697 -51565856 + L2 LINE L2 1462 1664 -1650 231 175 0 0 chr17 37940000 37940057 -51564496 + (TG)n Simple_repeat Simple_repeat 1 57 0 460 305 83 36 chr17 37940704 37941006 -51563547 - LTR40b LTR ERVL -2 460 145 2466 214 90 84 chr17 37941123 37941264 -51563289 - L1MD3 LINE L1 -5 8037 7898 225 0 0 0 chr17 37941264 37941289 -51563264 + (TC)n Simple_repeat Simple_repeat 2 26 0 2466 214 90 84 chr17 37941289 37942172 -51562381 - L1MD3 LINE L1 -144 7898 7024 1980 120 3 10 chr17 37942296 37942596 -51561957 - AluSc SINE Alu -11 298 1 2009 98 7 11 chr17 37942599 37942922 -51561631 - AluSx SINE Alu 0 322 1 1935 116 3 10 chr17 37942927 37943219 -51561334 - AluSc SINE Alu -19 290 1 2240 97 0 0 chr17 37943220 37943520 -51561033 - AluSg SINE Alu -10 300 1 1306 81 0 6 chr17 37943698 37943870 -51560683 - AluSq SINE Alu -142 171 1 2034 139 3 0 chr17 37943939 37944249 -51560304 - AluSx SINE Alu -1 311 1 2314 69 7 0 chr17 37944488 37944792 -51559761 + AluY SINE Alu 1 306 -5 1822 130 4 0 chr17 37944903 37945172 -51559381 + AluSx SINE Alu 9 278 -34 28 61 0 0 chr17 37945389 37945438 -51559115 + AT_rich Low_complexity Low_complexity 1 49 0 802 168 8 0 chr17 37945443 37945574 -51558979 - FLAM_C SINE Alu -1 132 1 2186 100 0 3 chr17 37945605 37945906 -51558647 + AluSq SINE Alu 1 300 -13 2128 113 0 7 chr17 37945918 37946228 -51558325 + AluSp SINE Alu 6 313 0 2107 99 7 10 chr17 37946474 37946777 -51557776 + AluSc SINE Alu 1 302 -7 672 149 0 9 chr17 37947036 37947143 -51557410 - L1PB3 LINE L1 -48 6106 6001 2129 119 3 3 chr17 37947380 37947692 -51556861 - AluSx SINE Alu 0 312 1 2092 89 25 0 chr17 37947900 37948180 -51556373 - AluSg SINE Alu -23 287 1 311 311 45 30 chr17 37948215 37948347 -51556206 - MIR3 SINE MIR -72 136 3 2189 109 0 0 chr17 37949479 37949781 -51554772 - AluSg SINE Alu -8 302 1 2354 68 0 3 chr17 37949787 37950083 -51554470 - AluSc SINE Alu -14 295 1 1597 170 3 7 chr17 37950240 37950523 -51554030 + AluJo SINE Alu 1 282 -30 2069 134 0 0 chr17 37950906 37951211 -51553342 - AluSx SINE Alu -7 305 1 2202 89 7 0 chr17 37951315 37951619 -51552934 - AluY SINE Alu -5 306 1 2023 60 4 23 chr17 37951959 37952224 -51552329 - AluSp SINE Alu -24 289 30 871 71 0 9 chr17 37952245 37952357 -51552196 - AluY SINE Alu -179 132 22 1451 180 9 75 chr17 37952366 37952552 -51552001 - AluJb SINE Alu 0 312 156 1993 142 3 0 chr17 37952552 37952863 -51551690 - AluSx SINE Alu 0 312 1 1451 180 9 75 chr17 37952863 37953010 -51551543 - AluJb SINE Alu -156 156 1 350 146 0 0 chr17 37953011 37953066 -51551487 - MER53 DNA DNA -134 55 1 1973 94 7 46 chr17 37953087 37953256 -51551297 - AluSq SINE Alu -18 295 142 2352 71 0 0 chr17 37953256 37953550 -51551003 - AluSq SINE Alu -19 294 1 1973 94 7 46 chr17 37953550 37953687 -51550866 - AluSq SINE Alu -171 142 1 2195 88 0 44 chr17 37953697 37953869 -51550684 - AluSq SINE Alu -8 305 152 1998 93 0 59 chr17 37953869 37954190 -51550363 - AluY SINE Alu -9 302 1 2195 88 0 44 chr17 37954190 37954334 -51550219 - AluSq SINE Alu -161 152 3 2061 93 0 55 chr17 37954919 37955063 -51549490 + AluSx SINE Alu 4 123 -189 2109 97 10 0 chr17 37955063 37955353 -51549200 + AluY SINE Alu 1 293 -18 2061 93 0 55 chr17 37955353 37955520 -51549033 + AluSx SINE Alu 123 298 -14 1896 95 0 89 chr17 37955527 37955843 -51548710 + AluSg SINE Alu 1 288 -22 717 162 17 0 chr17 37955950 37956067 -51548486 - FLAM_A SINE Alu -13 129 11 353 224 15 8 chr17 37956462 37956563 -51547990 + MIR3 SINE MIR 106 207 -1 623 258 0 0 chr17 37956653 37956785 -51547768 + FLAM_C SINE Alu 2 133 -10 2017 96 7 7 chr17 37956976 37957267 -51547286 - AluSg SINE Alu -19 291 1 1286 108 6 0 chr17 37957539 37957715 -51546838 + AluSx SINE Alu 1 177 -135 1376 41 0 6 chr17 37957815 37957984 -51546569 - AluY SINE Alu -142 169 2 516 158 30 0 chr17 37958015 37958116 -51546437 - MER53 DNA DNA -69 120 17 206 286 54 71 chr17 37959133 37959245 -51545308 + MIR SINE MIR 18 127 -81 1475 183 29 15 chr17 37959442 37959716 -51544837 + AluJb SINE Alu 1 278 -34 2145 93 4 4 chr17 37960209 37960488 -51544065 + AluSp SINE Alu 1 279 -34 2004 96 53 0 chr17 37961530 37961812 -51542741 + AluSx SINE Alu 2 298 -14 2267 109 0 7 chr17 37962946 37963248 -51541305 - AluSx SINE Alu -12 300 1 587 93 0 75 chr17 37963404 37963511 -51541042 + AluSg/x SINE Alu 211 309 0 709 325 109 10 chr17 37963511 37963660 -51540893 + L3 LINE CR1 1103 1236 -341 351 211 26 0 chr17 37963660 37963736 -51540817 + MER116 DNA Mariner 3 80 0 709 325 109 10 chr17 37963736 37963970 -51540583 + L3 LINE CR1 1236 1524 -53 38 0 0 20 chr17 37964121 37964133 -51540420 + AT_rich Low_complexity Low_complexity 1 12 -36 2322 104 0 0 chr17 37964133 37964441 -51540112 - AluSc SINE Alu -1 308 1 38 0 0 20 chr17 37964441 37964477 -51540076 + AT_rich Low_complexity Low_complexity 12 48 0 2206 93 3 3 chr17 37964477 37964766 -51539787 - AluSc SINE Alu -20 289 1 314 300 48 106 chr17 37964803 37965076 -51539477 + L2 LINE L2 3014 3270 -2 22 80 0 0 chr17 37965117 37965167 -51539386 + AT_rich Low_complexity Low_complexity 1 50 0 368 216 128 8 chr17 37965169 37965294 -51539259 + MER112 DNA MER1_type 119 258 -2 1349 140 14 27 chr17 37965526 37965747 -51538806 + AluJb SINE Alu 85 302 -10 762 197 15 8 chr17 37965761 37965893 -51538660 + FLAM_A SINE Alu 1 133 0 1991 97 6 84 chr17 37965916 37966236 -51538317 + AluSx SINE Alu 1 295 -17 2279 100 0 0 chr17 37966747 37967046 -51537507 - AluSx SINE Alu -13 299 1 1961 135 36 0 chr17 37967058 37967339 -51537214 - AluSq SINE Alu -22 291 1 309 284 32 81 chr17 37967713 37967872 -51536681 + MIR3 SINE MIR 8 153 -72 208 259 43 161 chr17 37968829 37968991 -51535562 - MIR SINE MIR -56 206 64 2401 72 13 3 chr17 37969120 37969424 -51535129 + AluSp SINE Alu 1 307 -6 684 26 0 0 chr17 37969426 37969503 -51535050 - AluY SINE Alu -24 287 211 227 284 236 47 chr17 37969611 37969738 -51534815 + L2 LINE L2 2876 3026 -287 2037 143 0 0 chr17 37969741 37970034 -51534519 - AluJb SINE Alu -13 299 7 2430 46 0 39 chr17 37970050 37970356 -51534197 - AluY SINE Alu -17 294 1 638 148 0 10 chr17 37970358 37970459 -51534094 - FLAM_C SINE Alu -6 137 38 2291 107 3 0 chr17 37970894 37971202 -51533351 - AluSp SINE Alu -4 309 1 2428 90 0 3 chr17 37971488 37971798 -51532755 + AluSp SINE Alu 1 309 -4 2356 57 0 0 chr17 37972239 37972546 -51532007 + AluY SINE Alu 1 307 0 790 232 81 10 chr17 37972599 37972765 -51531788 + MIR SINE MIR 41 225 -37 2369 92 0 16 chr17 37972765 37973080 -51531473 + AluSq SINE Alu 1 310 -3 790 232 81 10 chr17 37973080 37973111 -51531442 + MIR SINE MIR 225 252 -10 21 0 0 0 chr17 37973120 37973141 -51531412 + AT_rich Low_complexity Low_complexity 1 21 0 1081 88 0 0 chr17 37973142 37973278 -51531275 + AluSq SINE Alu 1 136 -176 282 184 0 0 chr17 37973278 37973354 -51531199 + A-rich Low_complexity Low_complexity 1 76 0 1347 96 6 0 chr17 37973354 37973532 -51531021 + AluSq SINE Alu 118 296 -17 22 39 0 39 chr17 37973568 37973590 -51530963 + AT_rich Low_complexity Low_complexity 1 22 -27 2145 120 3 0 chr17 37973590 37973882 -51530671 + AluSx SINE Alu 1 293 -19 22 39 0 39 chr17 37973882 37973910 -51530643 + AT_rich Low_complexity Low_complexity 22 49 0 1675 145 50 31 chr17 37974060 37974207 -51530346 + MER33 DNA MER1_type 2 145 -2440 2350 86 0 13 chr17 37974207 37974510 -51530043 - AluSq SINE Alu -14 299 1 1675 145 50 31 chr17 37974510 37974679 -51529874 + MER33 DNA MER1_type 145 324 0 945 146 32 25 chr17 37974817 37974975 -51529578 - AluJb SINE Alu -16 296 138 2300 92 7 0 chr17 37974983 37975275 -51529278 - AluSg SINE Alu -16 294 1 267 79 0 0 chr17 37975310 37975348 -51529205 + (TA)n Simple_repeat Simple_repeat 1 38 0 2265 62 0 21 chr17 37975485 37975804 -51528749 - AluSg SINE Alu 0 313 1 2703 30 0 0 chr17 37975913 37976217 -51528336 - AluY SINE Alu -7 304 1 21 0 0 0 chr17 37976552 37976573 -51527980 + GC_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr17 37976620 37976650 -51527903 + GC_rich Low_complexity Low_complexity 1 30 0 192 125 0 0 chr17 37976700 37976732 -51527821 + (TCCCC)n Simple_repeat Simple_repeat 1 32 0 217 228 11 43 chr17 37976880 37976972 -51527581 + CT-rich Low_complexity Low_complexity 1 89 0 510 119 0 0 chr17 37977272 37977356 -51527197 + (CTGGGG)n Simple_repeat Simple_repeat 6 89 0 2310 70 16 29 chr17 37977937 37978252 -51526301 + AluSx SINE Alu 1 311 -1 26 0 0 0 chr17 37979353 37979379 -51525174 + AT_rich Low_complexity Low_complexity 1 26 0 2108 77 42 11 chr17 37979659 37979946 -51524607 - AluYa5 SINE Alu -14 297 2 5663 33 0 11 chr17 37979963 37980600 -51523953 - SVA Other Other 0 1386 757 1976 123 6 35 chr17 37980769 37981086 -51523467 - AluSc SINE Alu -1 308 1 237 65 0 0 chr17 37981331 37981362 -51523191 + (T)n Simple_repeat Simple_repeat 1 31 0 189 0 0 0 chr17 37981471 37981492 -51523061 + (TG)n Simple_repeat Simple_repeat 1 21 0 2367 108 0 0 chr17 37981545 37981851 -51522702 - AluSg SINE Alu -4 306 1 2089 105 6 54 chr17 37982136 37982451 -51522102 - AluSq SINE Alu -13 300 1 406 311 58 16 chr17 37982456 37982694 -51521859 + L1ME LINE L1 5443 5699 -463 2354 74 0 0 chr17 37982696 37983010 -51521543 - AluY SINE Alu 0 314 1 820 149 0 50 chr17 37983011 37983152 -51521401 - AluSq/x SINE Alu -177 136 3 944 198 0 0 chr17 37983321 37983483 -51521070 - AluSc SINE Alu -14 295 134 1942 140 30 0 chr17 37983485 37983785 -51520768 - AluSx SINE Alu -3 309 1 1498 176 48 31 chr17 37983787 37984076 -51520477 - AluJo SINE Alu -18 294 1 1818 166 0 14 chr17 37984339 37984628 -51519925 - AluJb SINE Alu -27 285 1 189 0 0 0 chr17 37984825 37984846 -51519707 + (TG)n Simple_repeat Simple_repeat 1 21 0 1754 140 23 20 chr17 37984914 37985214 -51519339 + AluJb SINE Alu 1 301 -11 1943 151 20 3 chr17 37985297 37985596 -51518957 - AluSx SINE Alu -6 306 3 2560 48 0 3 chr17 37985976 37986288 -51518265 - AluY SINE Alu 0 311 1 1525 179 10 36 chr17 37986431 37986739 -51517814 - AluJo SINE Alu -10 302 3 1612 172 3 20 chr17 37986897 37987200 -51517353 + AluSx SINE Alu 1 298 -14 326 271 143 14 chr17 37987249 37987389 -51517164 + MIR3 SINE MIR 34 191 -17 3138 159 104 18 chr17 37987640 37988256 -51516297 - L1MB8 LINE L1 -5 6173 5505 2246 109 0 22 chr17 37988265 37988577 -51515976 - AluSx SINE Alu -7 305 1 2297 98 3 0 chr17 37988766 37989061 -51515492 - AluSp SINE Alu -17 296 1 2143 125 3 7 chr17 37989721 37990024 -51514529 - AluSx SINE Alu -10 302 1 1825 168 3 3 chr17 37990245 37990543 -51514010 + AluSx SINE Alu 1 298 -14 1004 312 81 6 chr17 37990786 37991300 -51513253 + L1ME4a LINE L1 5320 5905 -216 30 27 0 0 chr17 37991436 37991473 -51513080 + AT_rich Low_complexity Low_complexity 1 37 0 2447 53 0 0 chr17 37991542 37991849 -51512704 + AluY SINE Alu 1 307 0 21 36 0 0 chr17 37991972 37992000 -51512553 + AT_rich Low_complexity Low_complexity 1 28 0 1025 127 0 0 chr17 37992252 37992394 -51512159 + FLAM_C SINE Alu 1 142 -1 325 294 0 0 chr17 37992395 37992480 -51512073 - MLT1I LTR MaLR -245 164 80 1317 235 97 81 chr17 37992490 37992890 -51511663 + HAL1 LINE L1 853 1245 -1262 2074 126 0 10 chr17 37992890 37993192 -51511361 - AluSx SINE Alu -13 299 1 1317 235 97 81 chr17 37993192 37993592 -51510961 + HAL1 LINE L1 1245 1666 -841 870 192 28 0 chr17 37993675 37993852 -51510701 + AluJb SINE Alu 121 302 -10 246 250 157 24 chr17 37994039 37994371 -51510182 + L1M4 LINE L1 2784 3159 -2987 360 0 0 0 chr17 37994622 37994662 -51509891 + (CA)n Simple_repeat Simple_repeat 2 41 0 380 222 0 0 chr17 37994671 37994743 -51509810 - MIR SINE MIR -32 230 159 1443 190 10 60 chr17 37994744 37995044 -51509509 - AluJo SINE Alu -22 290 6 619 253 25 70 chr17 37995054 37995212 -51509341 - MIR SINE MIR -111 151 1 287 282 18 27 chr17 37995409 37995519 -51509034 - L1MC4a LINE L1 -1884 5924 5816 2424 58 0 14 chr17 37995740 37996031 -51508522 - AluY SINE Alu -24 287 1 1340 113 10 39 chr17 37996431 37996634 -51507919 + AluSg/x SINE Alu 97 293 -19 27 0 0 0 chr17 37997589 37997616 -51506937 + AT_rich Low_complexity Low_complexity 1 27 0 382 241 52 9 chr17 37997934 37998050 -51506503 + MARNA DNA Mariner 269 389 -197 2105 133 13 0 chr17 37998056 37998364 -51506189 + AluSx SINE Alu 1 312 0 25 31 0 0 chr17 37998653 37998685 -51505868 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr17 37998779 37998802 -51505751 + AT_rich Low_complexity Low_complexity 1 23 0 515 247 153 40 chr17 37999018 37999241 -51505312 + MIR SINE MIR 9 256 -6 333 0 0 0 chr17 38000069 38000106 -51504447 + (TG)n Simple_repeat Simple_repeat 2 38 0 204 125 0 0 chr17 38000106 38000138 -51504415 + (TA)n Simple_repeat Simple_repeat 2 33 0 1956 248 39 12 chr17 38000678 38001187 -51503366 + MER90 LTR ERV1 9 531 -44 318 302 50 96 chr17 38001209 38001510 -51503043 - HAL1b LINE L1 -854 494 208 339 25 0 0 chr17 38001831 38001871 -51502682 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2249 90 0 0 chr17 38001877 38002155 -51502398 - AluSx SINE Alu -34 278 1 23 33 0 0 chr17 38002479 38002509 -51502044 + AT_rich Low_complexity Low_complexity 1 30 0 957 135 0 0 chr17 38003175 38003308 -51501245 - FLAM_C SINE Alu 0 133 1 2102 162 0 0 chr17 38003462 38003771 -51500782 + AluSx SINE Alu 1 309 -3 1698 188 0 30 chr17 38003799 38004102 -51500451 + AluJo SINE Alu 1 294 -18 2167 114 0 20 chr17 38004104 38004402 -51500151 + AluSx SINE Alu 1 292 -20 2385 81 0 0 chr17 38004996 38005293 -51499260 - AluY SINE Alu -14 297 1 258 106 0 0 chr17 38006480 38006527 -51498026 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 2268 101 0 13 chr17 38008495 38008803 -51495750 + AluSq SINE Alu 1 304 -9 1279 189 3 106 chr17 38009149 38009471 -51495082 - AluSg1 SINE Alu -20 289 1 1544 198 3 35 chr17 38009501 38009789 -51494764 - AluJb SINE Alu -33 279 1 21 71 0 0 chr17 38009819 38009861 -51494692 + AT_rich Low_complexity Low_complexity 1 42 0 788 193 0 7 chr17 38010279 38010424 -51494129 + FRAM SINE Alu 2 145 -31 1291 116 0 0 chr17 38010472 38010644 -51493909 + AluSx SINE Alu 3 174 -138 354 109 0 0 chr17 38010650 38010705 -51493848 + AluSc SINE Alu 245 299 0 2256 74 10 7 chr17 38011327 38011623 -51492930 + AluSp SINE Alu 1 297 -16 970 58 0 0 chr17 38012761 38012882 -51491671 - AluSp SINE Alu -192 121 1 391 222 79 40 chr17 38012883 38013009 -51491544 - Charlie8 DNA MER1_type -2249 168 38 2203 99 0 10 chr17 38013474 38013786 -51490767 + AluSg SINE Alu 1 309 -1 206 233 0 96 chr17 38014333 38014406 -51490147 + MIR SINE MIR 187 252 -10 22 0 0 0 chr17 38015714 38015736 -51488817 + AT_rich Low_complexity Low_complexity 1 22 0 2249 86 13 0 chr17 38016315 38016617 -51487936 + AluSg SINE Alu 1 306 -4 2133 88 3 23 chr17 38016630 38016938 -51487615 + AluSx SINE Alu 6 307 -5 1859 89 4 0 chr17 38016945 38017193 -51487360 + AluSx SINE Alu 1 249 -63 745 146 152 38 chr17 38017195 38017353 -51487200 + THE1C LTR MaLR 200 375 0 183 80 0 0 chr17 38017699 38017724 -51486829 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 1786 186 21 3 chr17 38017803 38018141 -51486412 + MER2 DNA MER2_type 1 344 0 227 313 82 61 chr17 38019176 38019323 -51485230 - MIR SINE MIR -19 243 94 181 264 48 96 chr17 38019303 38019428 -51485125 + MIR SINE MIR 18 136 -72 * 844 299 40 17 chr17 38024047 38024566 -51479987 + L1MC3 LINE L1 5484 6014 -1771 183 229 115 0 chr17 38029475 38029536 -51475017 + L2 LINE L2 2903 2970 -343 521 252 25 74 chr17 38029842 38029984 -51474569 - L1MD3 LINE L1 0 7995 7848 1621 157 0 27 chr17 38029984 38030283 -51474270 + AluJo SINE Alu 1 291 -21 521 252 25 74 chr17 38030283 38030454 -51474099 - L1MD3 LINE L1 -147 7848 7495 365 279 0 41 chr17 38031343 38031465 -51473088 - L2 LINE L2 -740 2574 2458 577 259 144 4 chr17 38031889 38032125 -51472428 + MER113 DNA MER1_type? 20 288 -233 566 200 25 8 chr17 38032187 38032307 -51472246 - MER20 DNA MER1_type 0 219 98 400 315 34 13 chr17 38032329 38032478 -51472075 - MIR SINE MIR -64 198 47 192 71 0 0 chr17 38033065 38033093 -51471460 + MIR SINE MIR 123 150 -112 914 198 78 21 chr17 38033508 38033750 -51470803 + L1ME3 LINE L1 5887 6142 -20 1535 186 3 10 chr17 38034037 38034348 -51470205 - AluJo SINE Alu -3 309 1 1595 165 0 4 chr17 38034957 38035223 -51469330 - AluJb SINE Alu -47 265 1 336 122 20 0 chr17 38035243 38035292 -51469261 - 5S rRNA rRNA -71 50 1 4666 136 61 35 chr17 38036557 38036570 -51467983 - L1MB4 LINE L1 -1 6179 6168 180 0 0 0 chr17 38036570 38036590 -51467963 + (TA)n Simple_repeat Simple_repeat 1 20 0 4666 136 61 35 chr17 38036590 38037606 -51466947 - L1MB4 LINE L1 -12 6168 5135 859 127 8 8 chr17 38038195 38038329 -51466224 - AluJo SINE Alu -178 134 1 2132 117 10 0 chr17 38038688 38038995 -51465558 + AluSx SINE Alu 3 312 0 31 0 0 0 chr17 38039062 38039093 -51465460 + AT_rich Low_complexity Low_complexity 1 31 0 32 43 0 0 chr17 38039242 38039288 -51465265 + AT_rich Low_complexity Low_complexity 1 46 0 983 169 0 18 chr17 38039300 38039466 -51465087 + FRAM SINE Alu 4 166 0 2150 107 0 13 chr17 38039599 38039909 -51464644 + AluSx SINE Alu 1 306 -6 982 185 5 11 chr17 38040117 38040301 -51464252 - Tigger6 DNA MER2_type -1 1596 1414 749 177 0 0 chr17 38040611 38040724 -51463829 + Tigger3(Golem) DNA MER2_type 1 113 -2916 262 116 43 58 chr17 38040752 38040821 -51463732 + Tigger3(Golem) DNA MER2_type 269 336 -2693 1963 122 0 34 chr17 38040894 38041224 -51463329 - AluSx SINE Alu 0 320 1 240 35 0 0 chr17 38041224 38041253 -51463300 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 375 105 35 0 chr17 38041254 38041311 -51463242 - AluJo SINE Alu -20 282 224 887 151 0 0 chr17 38041312 38041451 -51463102 - AluJo SINE Alu -173 139 1 477 268 53 14 chr17 38041496 38041705 -51462848 - L1ME4a LINE L1 -202 5919 5703 287 143 0 0 chr17 38041755 38041804 -51462749 + L1M4 LINE L1 5238 5286 -860 1555 172 21 0 chr17 38041807 38042097 -51462456 + AluJb SINE Alu 2 297 -15 1389 119 0 0 chr17 38042206 38042400 -51462153 + AluSx SINE Alu 2 195 -117 628 213 22 7 chr17 38042411 38042547 -51462006 - MLT1A1 LTR MaLR -203 162 25 276 120 20 0 chr17 38042557 38042607 -51461946 + L1 LINE L1 5188 5238 -908 213 125 0 0 chr17 38042638 38042644 -51461909 + (TA)n Simple_repeat Simple_repeat 2 7 -34 1673 186 0 3 chr17 38042644 38042939 -51461614 + AluJb SINE Alu 1 294 -18 213 125 0 0 chr17 38042939 38042972 -51461581 + (TA)n Simple_repeat Simple_repeat 6 41 0 314 258 43 34 chr17 38042977 38043096 -51461457 + L1MC3 LINE L1 6550 6691 -1137 1426 125 64 46 chr17 38043104 38043281 -51461272 - MER44D DNA MER2_type -1908 583 411 2156 96 0 0 chr17 38043281 38043572 -51460981 - AluSg SINE Alu -19 291 1 1426 125 64 46 chr17 38043572 38043674 -51460879 - MER44D DNA MER2_type -2080 411 29 4108 147 22 52 chr17 38043691 38043830 -51460723 + L1MB8 LINE L1 5240 5382 -796 1795 169 7 0 chr17 38043830 38044138 -51460415 + AluSx SINE Alu 1 310 -2 4108 147 22 52 chr17 38044138 38044185 -51460368 + L1MB8 LINE L1 5382 5429 -749 1584 188 41 54 chr17 38044185 38044553 -51460000 - MLT1A1 LTR MaLR 0 365 3 4108 147 22 52 chr17 38044553 38044906 -51459647 + L1MB8 LINE L1 5429 5741 -437 1794 139 45 0 chr17 38044906 38045194 -51459359 + AluSx SINE Alu 1 301 -11 4108 147 22 52 chr17 38045194 38045517 -51459036 + L1MB8 LINE L1 5741 6072 -106 2266 88 7 0 chr17 38045517 38045825 -51458728 + AluSx SINE Alu 1 310 -2 1828 158 3 0 chr17 38046102 38046394 -51458159 - AluJb SINE Alu -19 293 1 22 0 0 0 chr17 38046678 38046700 -51457853 + AT_rich Low_complexity Low_complexity 1 22 0 1541 188 28 3 chr17 38046703 38046990 -51457563 - AluSx SINE Alu -11 301 8 1810 113 0 0 chr17 38047047 38047295 -51457258 + AluSq SINE Alu 1 248 -65 195 318 19 75 chr17 38047488 38047595 -51456958 - L2 LINE L2 -14 3299 3199 1224 126 0 0 chr17 38047654 38047836 -51456717 + AluSg/x SINE Alu 130 311 -1 3436 140 29 8 chr17 38047984 38048667 -51455886 + L1MA4A LINE L1 5163 5857 -446 308 106 0 0 chr17 38048784 38048831 -51455722 + AluSq SINE Alu 252 298 -4 700 157 0 0 chr17 38049696 38049804 -51454749 + Tigger2a DNA MER2_type 1 108 -326 1498 104 14 0 chr17 38049904 38050115 -51454438 + AluSg/x SINE Alu 88 301 -9 673 294 91 5 chr17 38050544 38050765 -51453788 + MIR SINE MIR 13 252 -10 865 206 0 0 chr17 38050908 38051073 -51453480 + FRAM SINE Alu 1 161 -15 1532 186 0 0 chr17 38051128 38051418 -51453135 - AluSq SINE Alu -23 290 1 620 221 0 26 chr17 38051523 38051708 -51452845 + AluY SINE Alu 132 312 0 1748 170 3 0 chr17 38051750 38052033 -51452520 + AluJo SINE Alu 3 286 -26 374 196 21 7 chr17 38052033 38052176 -51452377 + (TA)n Simple_repeat Simple_repeat 1 145 0 351 262 19 58 chr17 38052177 38052280 -51452273 + L2 LINE L2 3174 3272 0 205 342 68 75 chr17 38052296 38052457 -51452096 + L2 LINE L2 2924 3083 -189 297 122 0 0 chr17 38052887 38052928 -51451625 - Alu SINE Alu -262 41 1 248 272 33 22 chr17 38052930 38053022 -51451531 - L1MC/D LINE L1 -2145 5663 5571 1429 175 4 11 chr17 38053024 38053293 -51451260 - AluJb SINE Alu -12 300 34 2158 80 0 7 chr17 38053418 38053728 -51450825 + AluY SINE Alu 1 308 0 2106 103 7 3 chr17 38053793 38054093 -51450460 + AluSq SINE Alu 1 301 -12 181 204 91 0 chr17 38054494 38054538 -51450015 + MIR SINE MIR 200 247 -15 29 70 0 0 chr17 38054541 38054598 -51449955 + AT_rich Low_complexity Low_complexity 1 57 0 277 292 142 26 chr17 38054598 38054711 -51449842 - MIR SINE MIR -105 157 32 1868 141 3 3 chr17 38055027 38055352 -51449201 + AluSx SINE Alu 1 312 0 591 159 0 0 chr17 38055585 38055673 -51448880 - AluJ/FLAM SINE Alu -223 89 2 431 267 95 70 chr17 38055720 38055854 -51448699 + L1ME4a LINE L1 5554 5683 -438 2160 109 3 0 chr17 38055854 38056156 -51448397 + AluSp SINE Alu 1 303 -10 431 267 95 70 chr17 38056156 38056177 -51448376 + L1ME4a LINE L1 5683 5702 -419 1817 111 52 0 chr17 38056177 38056491 -51448062 + AluSq SINE Alu 1 328 0 431 267 95 70 chr17 38056491 38056618 -51447935 + L1ME4a LINE L1 5702 5845 -276 1418 144 134 25 chr17 38056619 38056896 -51447657 + AluJb SINE Alu 1 307 -5 476 277 66 15 chr17 38056933 38057070 -51447483 - MIR SINE MIR -71 191 48 2139 89 0 3 chr17 38057078 38057369 -51447184 - AluSg SINE Alu -15 295 6 5556 209 42 39 chr17 38059695 38060989 -51443564 - L1 LINE L1 -3413 3754 2466 2049 154 0 0 chr17 38060989 38061295 -51443258 - AluSx SINE Alu -3 309 4 5556 209 42 39 chr17 38061295 38061570 -51442983 - L1 LINE L1 -4701 2466 2193 1953 162 0 13 chr17 38061570 38061885 -51442668 + AluJo SINE Alu 1 311 -1 5556 209 42 39 chr17 38061885 38062587 -51441966 - L1 LINE L1 -4974 2193 1259 207 204 23 0 chr17 38062632 38062676 -51441877 - MIR SINE MIR -144 118 74 324 0 0 0 chr17 38062705 38062741 -51441812 + (TA)n Simple_repeat Simple_repeat 2 37 0 1552 103 4 39 chr17 38062741 38062965 -51441588 - AluJo SINE Alu -9 303 86 290 240 27 13 chr17 38063950 38064025 -51440528 - MLT1K LTR MaLR -4 584 509 210 109 22 22 chr17 38064938 38064984 -51439569 + T-rich Low_complexity Low_complexity 1 46 0 186 43 0 0 chr17 38065882 38065905 -51438648 + (GA)n Simple_repeat Simple_repeat 2 24 0 3691 56 9 21 chr17 38067153 38067640 -51436913 + L1PA8A LINE L1 5667 6147 0 181 0 0 0 chr17 38067620 38067660 -51436893 + (CAA)n Simple_repeat Simple_repeat 2 41 0 325 295 133 0 chr17 38067899 38068004 -51436549 + MER5B DNA MER1_type 59 177 -1 1877 127 0 0 chr17 38070202 38070461 -51434092 - AluSx SINE Alu -5 307 49 607 254 44 16 chr17 38070461 38070665 -51433888 + MER51A LTR ERV1 1 336 -304 225 250 40 26 chr17 38070738 38070814 -51433739 + MER51C LTR ERV1 355 431 -209 2113 124 3 0 chr17 38070829 38071127 -51433426 - AluSq SINE Alu -14 299 1 830 204 115 5 chr17 38071151 38071342 -51433211 + MER51C LTR ERV1 429 640 0 231 146 125 0 chr17 38071342 38071388 -51433165 - AluSx SINE Alu -250 52 1 2089 106 10 10 chr17 38071478 38071797 -51432756 + AluSc SINE Alu 1 309 0 222 342 70 26 chr17 38072136 38072250 -51432303 + L2 LINE L2 3122 3240 -32 2075 89 38 3 chr17 38073567 38073858 -51430695 + AluSc SINE Alu 3 303 -6 1451 198 0 14 chr17 38073933 38074211 -51430342 + AluJb SINE Alu 1 274 -38 1792 114 0 0 chr17 38074317 38074553 -51430000 - AluSq SINE Alu -76 237 2 27 49 0 0 chr17 38074563 38074604 -51429949 + AT_rich Low_complexity Low_complexity 1 41 0 2060 105 10 16 chr17 38074631 38074944 -51429609 - AluSx SINE Alu -1 311 1 1718 166 46 36 chr17 38075238 38075545 -51429008 - AluJb SINE Alu -2 310 1 230 325 152 26 chr17 38075959 38076011 -51428542 - L2 LINE L2 -5 3267 3223 2180 96 16 35 chr17 38076011 38076324 -51428229 + AluSq SINE Alu 1 307 -6 230 325 152 26 chr17 38076324 38076422 -51428131 - L2 LINE L2 -49 3223 3098 496 346 141 24 chr17 38076629 38077216 -51427337 - L2 LINE L2 -450 2864 2209 322 311 19 39 chr17 38077397 38077500 -51427053 + L2 LINE L2 3201 3301 -12 204 40 0 0 chr17 38077500 38077525 -51427028 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 2298 81 7 3 chr17 38077766 38078061 -51426492 + AluSp SINE Alu 2 297 -16 1518 186 53 21 chr17 38078284 38078569 -51425984 - AluJb SINE Alu -18 294 1 189 0 0 0 chr17 38079343 38079364 -51425189 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2117 110 40 0 chr17 38079711 38080012 -51424541 + AluSq SINE Alu 1 313 0 2353 77 3 10 chr17 38081013 38081311 -51423242 - AluSc SINE Alu -13 296 1 22 35 0 0 chr17 38081355 38081384 -51423169 + AT_rich Low_complexity Low_complexity 1 29 0 1872 115 63 0 chr17 38081649 38081919 -51422634 - AluSx SINE Alu 0 312 26 239 86 0 0 chr17 38082536 38082571 -51421982 - AluSx SINE Alu -265 35 1 810 128 0 0 chr17 38082573 38082698 -51421855 + AluSp/q SINE Alu 185 309 -4 831 152 15 15 chr17 38082702 38082834 -51421719 + FLAM_C SINE Alu 2 133 0 23 0 0 0 chr17 38083119 38083142 -51421411 + AT_rich Low_complexity Low_complexity 1 23 0 517 246 185 10 chr17 38085580 38085775 -51418778 - MIR SINE MIR -20 242 14 341 286 161 10 chr17 38086181 38086380 -51418173 - MIR SINE MIR 0 262 34 2325 82 17 3 chr17 38086711 38087005 -51417548 - AluSx SINE Alu -14 298 1 2068 125 0 19 chr17 38087945 38088258 -51416295 - AluSq SINE Alu -6 307 1 711 84 0 0 chr17 38088260 38088355 -51416198 - AluSp/q SINE Alu -4 309 215 220 335 112 26 chr17 38089427 38089579 -51414974 - L3 LINE CR1 -63 1514 1350 32 0 0 0 chr17 38089579 38089611 -51414942 + AT_rich Low_complexity Low_complexity 1 32 0 2181 68 7 11 chr17 38089611 38089892 -51414661 - AluY SINE Alu -31 280 1 1001 96 0 15 chr17 38089892 38090028 -51414525 - AluY SINE Alu -177 134 1 21 0 0 0 chr17 38090028 38090049 -51414504 + AT_rich Low_complexity Low_complexity 1 21 0 236 258 65 129 chr17 38090169 38090293 -51414260 + L2 LINE L2 3142 3257 -15 1634 193 0 13 chr17 38092090 38092390 -51412163 - AluJo SINE Alu -16 296 1 2930 115 50 9 chr17 38092493 38092955 -51411598 - L1MA4 LINE L1 -6 6294 5814 898 74 25 8 chr17 38092968 38093090 -51411463 - BC200 scRNA scRNA -60 140 17 946 138 12 12 chr17 38093090 38093257 -51411296 - L1MA4 LINE L1 -472 5828 5662 * 9509 152 42 99 chr17 38093254 38093891 -51410662 - L1MA4 LINE L1 -791 5355 4683 1186 143 273 29 chr17 38093891 38094129 -51410424 - AluJb SINE Alu -6 296 1 9509 152 42 99 chr17 38094129 38094533 -51410020 - L1MA4 LINE L1 -1463 4683 4257 2460 87 0 0 chr17 38094533 38094843 -51409710 - AluSx SINE Alu -2 310 1 1013 132 0 0 chr17 38094845 38094989 -51409564 - AluJb SINE Alu -15 297 154 9509 152 42 99 chr17 38094989 38095360 -51409193 - L1MA4 LINE L1 -1890 4256 3865 221 0 35 0 chr17 38095360 38095389 -51409164 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2182 88 0 11 chr17 38095391 38095676 -51408877 - AluSc SINE Alu -27 282 1 9509 152 42 99 chr17 38095676 38096100 -51408453 - L1MA4 LINE L1 -2282 3864 3417 1931 191 116 16 chr17 38096100 38096488 -51408065 - MSTA LTR MaLR -1 427 1 9509 152 42 99 chr17 38096488 38097052 -51407501 - L1MA4 LINE L1 -2729 3417 2860 1444 174 71 0 chr17 38097153 38097435 -51407118 + AluJb SINE Alu 1 302 -10 280 222 0 0 chr17 38097435 38097489 -51407064 + L3 LINE CR1 1521 1574 -3 2223 84 16 42 chr17 38098201 38098509 -51406044 + AluSx SINE Alu 2 301 -11 328 240 240 10 chr17 38099740 38099844 -51404709 - L2 LINE L2 -5 3308 3181 351 288 63 78 chr17 38100077 38100252 -51404301 + L1ME LINE L1 5332 5503 -618 1641 137 49 53 chr17 38100252 38100562 -51403991 + AluJo SINE Alu 3 311 0 351 288 63 78 chr17 38100562 38100717 -51403836 + L1ME LINE L1 5503 5659 -462 1153 228 21 4 chr17 38101927 38102164 -51402389 + MLT1F LTR MaLR 11 251 -291 2228 113 3 0 chr17 38102522 38102814 -51401739 + AluSx SINE Alu 1 293 -19 2324 96 3 7 chr17 38103211 38103514 -51401039 + AluSx SINE Alu 1 302 -10 382 301 95 16 chr17 38103539 38103750 -51400803 + MIR SINE MIR 1 223 -39 527 82 0 14 chr17 38103986 38104059 -51400494 - L1MB8 LINE L1 -6 6172 6101 2448 157 83 9 chr17 38104061 38104351 -51400202 - L1M4 LINE L1 -408 5770 5503 2260 97 7 3 chr17 38104351 38104649 -51399904 - AluSg SINE Alu -11 299 1 2053 119 7 7 chr17 38104652 38104945 -51399608 - AluSx SINE Alu -19 293 1 2448 157 83 9 chr17 38104945 38105287 -51399266 - L1M4 LINE L1 -676 5502 5088 1630 163 64 11 chr17 38105508 38105791 -51398762 - AluJb SINE Alu -14 298 1 32 26 0 0 chr17 38105877 38105916 -51398637 + AT_rich Low_complexity Low_complexity 1 39 0 1726 191 10 3 chr17 38105990 38106289 -51398264 - AluJo SINE Alu -11 301 1 2190 128 0 3 chr17 38106389 38106695 -51397858 - AluSx SINE Alu -7 305 1 2291 180 81 57 chr17 38106886 38107548 -51397005 - L1MD3 LINE L1 -10 8002 7359 416 179 105 0 chr17 38107529 38107624 -51396929 - L1MC5 LINE L1 -853 7108 7004 * 687 112 10 0 chr17 38107721 38107848 -51396705 - AluSg/x SINE Alu 0 311 184 993 168 0 38 chr17 38107965 38108150 -51396403 + AluJb SINE Alu 130 307 -5 462 269 64 21 chr17 38108187 38108328 -51396225 - MIR SINE MIR -71 191 45 2308 86 3 0 chr17 38108332 38108623 -51395930 - AluSx SINE Alu -15 297 6 1987 133 0 23 chr17 38108631 38108794 -51395759 - AluSq SINE Alu -18 295 141 2228 115 0 3 chr17 38108794 38109106 -51395447 - AluY SINE Alu 0 311 1 1987 133 0 23 chr17 38109106 38109244 -51395309 - AluSq SINE Alu -172 141 1 937 217 165 29 chr17 38109431 38109813 -51394740 - L1MC4a LINE L1 -1640 6168 5735 662 284 12 12 chr17 38110093 38110262 -51394291 + MIR SINE MIR 34 202 -60 1642 131 45 24 chr17 38110956 38111246 -51393307 + AluJb SINE Alu 1 296 -16 188 354 35 42 chr17 38111548 38111692 -51392861 - L2 LINE L2 -926 2388 2246 637 219 67 49 chr17 38111730 38111781 -51392772 - MER5B DNA MER1_type -11 167 118 2096 110 7 3 chr17 38111781 38112090 -51392463 + AluSq SINE Alu 1 310 -3 637 219 67 49 chr17 38112090 38112202 -51392351 - MER5B DNA MER1_type -60 118 1 2009 117 3 13 chr17 38112932 38113230 -51391323 + AluSx SINE Alu 14 308 -4 1955 135 3 16 chr17 38113497 38113809 -51390744 + AluJb SINE Alu 1 308 -4 288 266 127 0 chr17 38114661 38114740 -51389813 + MIR SINE MIR 59 147 -115 194 91 30 0 chr17 38114786 38114819 -51389734 + (TG)n Simple_repeat Simple_repeat 2 35 0 2145 104 7 3 chr17 38115950 38116259 -51388294 + AluY SINE Alu 1 310 -1 22 56 0 0 chr17 38116403 38116439 -51388114 + AT_rich Low_complexity Low_complexity 1 36 0 2250 84 7 0 chr17 38116597 38116895 -51387658 + AluSp SINE Alu 1 300 -13 2425 56 0 7 chr17 38117190 38117494 -51387059 + AluY SINE Alu 1 302 -9 2115 115 0 0 chr17 38118154 38118459 -51386094 - AluSg SINE Alu 0 310 6 1732 137 13 47 chr17 38119814 38120114 -51384439 + AluSx SINE Alu 1 290 -22 254 233 0 0 chr17 38120127 38120187 -51384366 + AluJo SINE Alu 83 142 -160 2154 104 3 3 chr17 38120189 38120487 -51384066 + AluSc SINE Alu 1 298 -11 1582 189 4 0 chr17 38120501 38120782 -51383771 + AluJo SINE Alu 1 282 -30 261 0 0 0 chr17 38120785 38120814 -51383739 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 589 297 40 31 chr17 38120819 38120899 -51383654 + HAL1 LINE L1 1661 1739 -768 1985 125 3 23 chr17 38120899 38121203 -51383350 + AluSg SINE Alu 1 298 -12 589 297 40 31 chr17 38121203 38121344 -51383209 + HAL1 LINE L1 1739 1884 -623 2006 140 7 0 chr17 38121420 38121728 -51382825 - AluSx SINE Alu -2 310 1 210 37 0 0 chr17 38122274 38122301 -51382252 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2193 79 7 3 chr17 38123280 38123584 -51380969 + AluSq SINE Alu 1 305 -8 246 288 0 14 chr17 38124211 38124284 -51380269 + L2 LINE L2 3200 3271 -1 4480 99 26 2 chr17 38125623 38126248 -51378305 - MER51C LTR ERV1 0 640 1 400 112 26 0 chr17 38126248 38126324 -51378229 - MER51A LTR ERV1 -579 61 1 594 184 44 0 chr17 38126786 38126900 -51377653 - FLAM_A SINE Alu -11 131 13 350 169 51 0 chr17 38127164 38127223 -51377330 + AluJ/FLAM SINE Alu 1 62 -240 563 153 0 0 chr17 38127229 38127314 -51377239 - AluS SINE Alu -226 86 2 2077 110 0 16 chr17 38127623 38127931 -51376622 + AluSg SINE Alu 1 303 -7 1317 156 51 36 chr17 38128131 38128406 -51376147 - AluJo SINE Alu -33 279 1 3288 155 53 10 chr17 38128427 38129026 -51375527 - L1MB2 LINE L1 -7 6164 5540 1494 144 30 15 chr17 38129073 38129343 -51375210 + L1MA5 LINE L1 6027 6300 0 231 293 231 0 chr17 38129356 38129561 -51374992 - L1M4 LINE L1 -2108 4038 3882 4625 124 38 30 chr17 38129561 38130063 -51374490 - L1MA4 LINE L1 0 6300 5787 1935 143 7 0 chr17 38130063 38130371 -51374182 - AluJb SINE Alu -2 310 1 4625 124 38 30 chr17 38130371 38130701 -51373852 - L1MA4 LINE L1 -513 5787 5461 231 293 231 0 chr17 38130701 38130802 -51373751 - L1M4 LINE L1 -2264 3882 3661 2108 75 57 0 chr17 38131744 38132025 -51372528 + AluSx SINE Alu 1 297 -15 777 177 13 6 chr17 38132676 38132834 -51371719 - Charlie4 DNA MER1_type 0 1961 1803 874 206 65 32 chr17 38132858 38133105 -51371448 - Charlie4 DNA MER1_type -1705 256 2 1868 167 91 60 chr17 38133268 38133752 -51370801 + MLT1D LTR MaLR 5 503 -2 248 240 0 0 chr17 38134686 38134736 -51369817 + Alu SINE Alu 118 167 -141 1795 100 10 93 chr17 38134943 38135287 -51369266 - AluSx SINE Alu 0 319 2 726 255 222 5 chr17 38135287 38135675 -51368878 + L1ME4a LINE L1 5467 5938 -183 1761 143 10 27 chr17 38135853 38136154 -51368399 - AluJo SINE Alu -16 296 1 794 83 9 0 chr17 38136912 38137021 -51367532 - HY1 scRNA scRNA -1 111 2 642 293 71 4 chr17 38138471 38138696 -51365857 + MER112 DNA MER1_type 21 260 0 466 119 0 0 chr17 38138700 38138767 -51365786 - MER20 DNA MER1_type -4 215 149 * 1203 162 33 14 chr17 38138765 38138975 -51365578 + MER20 DNA MER1_type 6 219 0 1950 152 0 3 chr17 38138990 38139293 -51365260 + AluSx SINE Alu 1 302 -10 183 80 0 0 chr17 38139293 38139318 -51365235 + (GA)n Simple_repeat Simple_repeat 1 25 0 318 372 84 53 chr17 38139325 38140209 -51364344 - L2 LINE L2 -337 2977 2067 477 132 0 44 chr17 38140314 38140405 -51364148 + AluJ/FLAM SINE Alu 2 88 -224 823 131 16 0 chr17 38140506 38140628 -51363925 + AluJo SINE Alu 11 134 -178 1281 134 4 69 chr17 38141200 38141431 -51363122 - AluJb SINE Alu -12 300 85 328 151 0 0 chr17 38141637 38141690 -51362863 + Alu SINE Alu 242 294 -6 1568 181 19 29 chr17 38142992 38143306 -51361247 - AluJo SINE Alu -1 311 1 1948 127 21 0 chr17 38143332 38143623 -51360930 + AluSx SINE Alu 1 297 -15 1522 123 0 13 chr17 38144151 38144379 -51360174 - AluJb SINE Alu -7 305 81 610 222 4 126 chr17 38144415 38144654 -51359899 + AluJb SINE Alu 2 211 -101 794 170 75 6 chr17 38145479 38145638 -51358915 - MER45A DNA AcHobo 0 178 9 23 101 0 0 chr17 38146990 38147069 -51357484 + GC_rich Low_complexity Low_complexity 1 79 0 193 240 62 62 chr17 38147630 38147695 -51356858 + MIR SINE MIR 124 191 -71 2226 88 7 0 chr17 38147695 38147989 -51356564 + AluSx SINE Alu 1 296 -16 193 240 62 62 chr17 38147989 38148019 -51356534 + MIR SINE MIR 190 219 -43 395 285 173 32 chr17 38148835 38149183 -51355370 + L2 LINE L2 2635 3033 -239 1789 133 50 10 chr17 38149201 38149501 -51355052 - AluJb SINE Alu 0 312 1 1600 151 35 21 chr17 38150085 38150369 -51354184 - AluJb SINE Alu -24 288 1 510 211 32 87 chr17 38150624 38150703 -51353850 - MER5A DNA MER1_type -1 188 106 2551 27 0 0 chr17 38150703 38151000 -51353553 - AluY SINE Alu -14 297 1 510 211 32 87 chr17 38151000 38151105 -51353448 - MER5A DNA MER1_type -83 106 14 216 309 183 23 chr17 38151584 38151759 -51352794 + MIR SINE MIR 60 262 0 246 278 28 0 chr17 38151762 38151834 -51352719 - MER116 DNA Mariner -6 74 1 216 0 0 0 chr17 38152846 38152870 -51351683 + (TA)n Simple_repeat Simple_repeat 2 25 0 2365 63 0 3 chr17 38152923 38153224 -51351329 + AluY SINE Alu 1 300 -11 852 270 71 15 chr17 38153307 38153644 -51350909 - L1ME LINE L1 -376 5786 5431 2243 95 0 7 chr17 38153879 38154183 -51350370 + AluSx SINE Alu 1 302 -10 1112 140 0 0 chr17 38154189 38154353 -51350200 + FRAM SINE Alu 1 156 -20 636 163 52 7 chr17 38154504 38154639 -51349914 + Charlie4 DNA MER1_type 1821 1961 0 2122 89 0 0 chr17 38155245 38155576 -51348977 - AluSc SINE Alu 0 331 1 369 228 121 54 chr17 38156924 38157073 -51347480 + L1ME1 LINE L1 5708 5866 -300 24 0 0 0 chr17 38157222 38157246 -51347307 + AT_rich Low_complexity Low_complexity 1 24 0 1171 179 15 5 chr17 38157459 38157660 -51346893 - MER20 DNA MER1_type -16 203 1 2215 97 0 0 chr17 38157663 38157963 -51346590 + AluSq SINE Alu 1 300 -13 470 208 180 55 chr17 38159536 38159701 -51344852 + MER58C DNA MER1_type 2 194 -2226 1782 96 0 4 chr17 38159701 38159951 -51344602 + AluSg1 SINE Alu 1 249 -60 470 208 180 55 chr17 38159951 38159968 -51344585 + MER58C DNA MER1_type 194 207 -8 2120 96 0 17 chr17 38162150 38162443 -51342110 + AluSq SINE Alu 5 292 -21 353 322 92 99 chr17 38162760 38163033 -51341520 + L2 LINE L2 2989 3259 -13 531 110 0 0 chr17 38163731 38163804 -51340749 + AluS SINE Alu 2 74 -239 2525 62 0 0 chr17 38163807 38164116 -51340437 - AluY SINE Alu -2 309 1 883 166 0 75 chr17 38164634 38164692 -51339861 - AluJo SINE Alu -139 173 112 2184 94 3 0 chr17 38164692 38164989 -51339564 + AluSq SINE Alu 1 298 -15 883 166 0 75 chr17 38164989 38165117 -51339436 - AluJo SINE Alu -200 112 1 22 35 0 0 chr17 38166345 38166374 -51338179 + GC_rich Low_complexity Low_complexity 1 29 0 1504 152 97 0 chr17 38167726 38167995 -51336558 + AluJb SINE Alu 1 295 -17 1970 123 3 3 chr17 38168436 38168729 -51335824 - AluSx SINE Alu -19 293 1 32 0 0 0 chr17 38168729 38168761 -51335792 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr17 38169494 38169517 -51335036 + AT_rich Low_complexity Low_complexity 1 23 0 233 169 17 0 chr17 38169780 38169839 -51334714 + (CA)n Simple_repeat Simple_repeat 2 61 0 207 167 0 37 chr17 38170564 38170618 -51333935 + A-rich Low_complexity Low_complexity 2 53 0 2220 100 0 0 chr17 38172482 38172781 -51331772 - AluSx SINE Alu -13 299 1 2127 102 30 0 chr17 38176860 38177163 -51327390 - AluSx SINE Alu 0 312 1 219 219 0 0 chr17 38179548 38179589 -51324964 + GA-rich Low_complexity Low_complexity 2 42 0 761 222 42 0 chr17 38181249 38181416 -51323137 + MER5B DNA MER1_type 1 174 -4 2280 99 0 0 chr17 38181727 38182029 -51322524 - AluSc SINE Alu -7 302 1 368 194 16 0 chr17 38182050 38182112 -51322441 - AluJo SINE Alu -19 283 221 455 219 0 0 chr17 38182112 38182194 -51322359 - AluJo SINE Alu -124 188 107 618 163 0 0 chr17 38182294 38182386 -51322167 - AluJ/FLAM SINE Alu -220 92 1 868 186 12 12 chr17 38182435 38182602 -51321951 + AluJb SINE Alu 137 303 -9 349 262 255 0 chr17 38183982 38184131 -51320422 - MIR SINE MIR -1 261 75 644 267 78 11 chr17 38184962 38185153 -51319400 + MIR SINE MIR 47 250 -12 2069 116 0 28 chr17 38185389 38185708 -51318845 - AluSx SINE Alu -2 310 1 645 287 17 21 chr17 38185946 38186183 -51318370 + L1MC4 LINE L1 7807 8042 0 194 324 27 27 chr17 38186827 38186901 -51317652 + MIR SINE MIR 16 89 -119 423 216 153 60 chr17 38189922 38190190 -51314363 - L1ME4a LINE L1 -81 6040 5748 4744 188 112 64 chr17 38190235 38191452 -51313101 - L1MC4 LINE L1 -5 8037 6880 2031 121 0 3 chr17 38191452 38191741 -51312812 - AluSq SINE Alu -25 288 1 4744 188 112 64 chr17 38191741 38191840 -51312713 - L1MC4 LINE L1 -1162 6880 6787 523 26 40 0 chr17 38191840 38191916 -51312637 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 4744 188 112 64 chr17 38191916 38192060 -51312493 - L1MC4 LINE L1 -1255 6787 6506 1605 157 50 11 chr17 38192913 38193194 -51311359 + AluJo SINE Alu 1 292 -20 180 313 36 36 chr17 38194245 38194328 -51310225 + L2 LINE L2 3187 3269 -3 557 262 113 4 chr17 38194699 38194928 -51309625 + L1ME4a LINE L1 5690 5943 -178 312 224 51 31 chr17 38195344 38195442 -51309111 - Charlie8 DNA MER1_type -2196 221 122 2210 91 7 0 chr17 38196209 38196518 -51308035 - AluSp SINE Alu -2 311 1 2165 129 0 0 chr17 38197163 38197474 -51307079 + AluSx SINE Alu 1 311 -1 230 304 98 0 chr17 38197487 38197579 -51306974 - L1ME4a LINE L1 -543 5578 5478 405 0 0 0 chr17 38197880 38197925 -51306628 + (TG)n Simple_repeat Simple_repeat 2 46 0 326 157 0 0 chr17 38198575 38198626 -51305927 - MER66A LTR ERV1 -141 337 287 1865 138 3 16 chr17 38198722 38199026 -51305527 - AluJb SINE Alu -12 300 1 2302 82 13 0 chr17 38199589 38199895 -51304658 + AluSp SINE Alu 1 310 -3 1941 96 0 4 chr17 38200035 38200296 -51304257 + AluSx SINE Alu 1 260 -52 216 0 0 0 chr17 38200297 38200321 -51304232 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr17 38200585 38200606 -51303947 + AT_rich Low_complexity Low_complexity 1 21 0 1851 117 72 14 chr17 38202200 38202335 -51302218 + AluSx SINE Alu 1 127 -185 2355 77 0 0 chr17 38202335 38202633 -51301920 + AluSg SINE Alu 1 298 -12 1851 117 72 14 chr17 38202633 38202788 -51301765 + AluSx SINE Alu 127 308 -4 833 122 46 23 chr17 38203449 38203580 -51300973 - FLAM_C SINE Alu -8 135 2 680 197 0 0 chr17 38204401 38204523 -51300030 + FLAM_A SINE Alu 15 136 -6 1364 208 13 23 chr17 38204703 38205006 -51299547 - AluJo SINE Alu -12 300 1 1751 161 3 10 chr17 38205049 38205360 -51299193 - AluJb SINE Alu -3 309 1 375 311 12 37 chr17 38206341 38206505 -51298048 + MIR3 SINE MIR 47 206 -2 2004 123 127 51 chr17 38206906 38207320 -51297233 + MSTB1 LTR MaLR 1 429 -3 510 316 80 0 chr17 38207762 38207979 -51296574 - MIR SINE MIR -1 261 28 493 229 186 0 chr17 38208227 38208367 -51296186 - MIR SINE MIR -32 230 65 1337 218 31 3 chr17 38208603 38208892 -51295661 + AluJo SINE Alu 1 297 -15 2243 103 0 0 chr17 38208895 38209197 -51295356 + AluSx SINE Alu 2 303 -9 22 35 0 0 chr17 38209222 38209251 -51295302 + AT_rich Low_complexity Low_complexity 1 29 0 265 222 32 16 chr17 38210759 38210822 -51293731 - MIR SINE MIR -85 123 60 1335 122 109 0 chr17 38210846 38211067 -51293486 - AluSx SINE Alu -25 287 43 2321 99 7 0 chr17 38212442 38212735 -51291818 + AluSg SINE Alu 2 296 -14 1492 179 21 25 chr17 38212869 38213154 -51291399 - AluJb SINE Alu -28 284 1 1869 151 21 7 chr17 38213301 38213592 -51290961 - AluSx SINE Alu -17 295 1 2367 90 0 0 chr17 38213756 38214057 -51290496 - AluSx SINE Alu -11 301 1 1626 180 4 4 chr17 38214368 38214640 -51289913 - AluJb SINE Alu -19 293 22 2340 120 0 0 chr17 38214665 38214974 -51289579 - AluSc SINE Alu 0 309 1 2157 138 0 0 chr17 38214999 38215297 -51289256 - AluSx SINE Alu -14 298 1 1380 119 14 162 chr17 38215404 38215756 -51288797 - AluSp SINE Alu -13 300 1 443 273 96 38 chr17 38215833 38216042 -51288511 + MLT1J LTR MaLR 289 509 -2 219 266 33 14 chr17 38216513 38216617 -51287936 + MIR SINE MIR 46 151 -57 1682 71 0 0 chr17 38216619 38216829 -51287724 + L1PA8A LINE L1 5433 5642 -489 499 66 0 0 chr17 38266830 38266891 -51237662 - Alu SINE Alu -248 62 2 427 231 60 8 chr17 38266904 38267021 -51237532 + MIR SINE MIR 124 246 -16 201 294 0 0 chr17 38267023 38267115 -51237438 + (TAG)n Simple_repeat Simple_repeat 2 93 0 1548 168 88 15 chr17 38267161 38267435 -51237118 + AluJo SINE Alu 1 294 -18 485 251 6 0 chr17 38267435 38267602 -51236951 + (TAG)n Simple_repeat Simple_repeat 1 168 0 239 258 12 18 chr17 38267624 38267787 -51236766 + (TAG)n Simple_repeat Simple_repeat 3 164 0 360 300 38 35 chr17 38268573 38268750 -51235803 + MIR SINE MIR 42 262 0 258 238 14 86 chr17 38269608 38269752 -51234801 + MIR3 SINE MIR 56 189 -19 1233 246 113 54 chr17 38270713 38270743 -51233810 - L2 LINE L2 0 3313 3286 2103 106 31 7 chr17 38270743 38271036 -51233517 + AluSx SINE Alu 3 302 -10 1233 246 113 54 chr17 38271036 38271885 -51232668 - L2 LINE L2 -27 3286 2359 340 339 0 31 chr17 38272001 38272131 -51232422 + MIR SINE MIR 16 141 -121 387 0 0 0 chr17 38272137 38272180 -51232373 + (TG)n Simple_repeat Simple_repeat 1 43 0 2389 95 0 0 chr17 38272233 38272538 -51232015 + AluY SINE Alu 1 305 -6 2100 117 0 45 chr17 38272639 38272948 -51231605 - AluSx SINE Alu -17 295 1 532 284 49 0 chr17 38272952 38273114 -51231439 + MIR SINE MIR 91 260 -2 413 333 44 11 chr17 38273438 38273621 -51230932 - MIR3 SINE MIR -13 195 7 414 0 0 0 chr17 38274101 38274147 -51230406 + (TG)n Simple_repeat Simple_repeat 2 47 0 1651 54 0 5 chr17 38275328 38275531 -51229022 + L1PA8 LINE L1 5956 6157 -15 216 296 157 31 chr17 38275583 38275663 -51228890 - MIR SINE MIR -50 212 143 2028 165 3 0 chr17 38275663 38275972 -51228581 + AluJb SINE Alu 1 310 -2 216 296 157 31 chr17 38275972 38276050 -51228503 - MIR SINE MIR -119 143 34 312 102 0 0 chr17 38276252 38276301 -51228252 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1941 112 4 18 chr17 38276308 38276586 -51227967 - AluJb SINE Alu -38 274 1 338 349 38 0 chr17 38276830 38276962 -51227591 - MIR SINE MIR -108 154 18 2283 81 0 11 chr17 38277035 38277349 -51227204 - AluY SINE Alu 0 311 1 307 276 92 51 chr17 38277385 38277581 -51226972 + L1MC4a LINE L1 5948 6151 -1657 2026 154 19 6 chr17 38277589 38277953 -51226600 - L1MB3 LINE L1 -1 6182 5814 324 98 0 0 chr17 38277996 38278047 -51226506 - L1MB3 LINE L1 -349 5834 5784 311 264 58 11 chr17 38278047 38278134 -51226419 - L1MC4 LINE L1 -1348 6694 6604 2397 93 3 0 chr17 38278204 38278505 -51226048 + AluSq SINE Alu 1 302 -11 931 131 20 7 chr17 38278505 38278658 -51225895 - L1M3 LINE L1 -422 5749 5595 213 257 99 99 chr17 38278976 38279128 -51225425 + MIR SINE MIR 34 185 -77 573 253 0 0 chr17 38279837 38279999 -51224554 + CT-rich Low_complexity Low_complexity 2 163 0 241 261 0 15 chr17 38280032 38280097 -51224456 + CT-rich Low_complexity Low_complexity 4 67 0 2182 99 3 38 chr17 38280297 38280610 -51223943 - AluSq SINE Alu -11 302 1 496 307 93 19 chr17 38281018 38281233 -51223320 + L2 LINE L2 3082 3312 -1 2380 105 0 0 chr17 38281420 38281726 -51222827 + AluSg SINE Alu 1 306 -4 2270 92 3 0 chr17 38281780 38282085 -51222468 + AluSp SINE Alu 1 306 0 203 299 92 46 chr17 38282192 38282279 -51222274 - L2 LINE L2 -21 3251 3161 2247 115 0 0 chr17 38282281 38282569 -51221984 + AluSq SINE Alu 12 299 -14 1024 92 0 35 chr17 38282963 38283105 -51221448 - FLAM_C SINE Alu -6 137 1 956 137 27 0 chr17 38283105 38283251 -51221302 - MER20 DNA MER1_type -21 198 49 2364 261 34 9 chr17 38283251 38284055 -51220498 - MER45C DNA AcHobo -1 952 66 231 250 18 0 chr17 38284074 38284130 -51220423 - MER20 DNA MER1_type -162 57 1 202 340 47 19 chr17 38284135 38284241 -51220312 - L2 LINE L2 -202 3070 2962 680 289 53 13 chr17 38284796 38285021 -51219532 - MIR SINE MIR -16 246 13 270 188 60 128 chr17 38285019 38285062 -51219491 + MIR SINE MIR 124 168 -94 * 2021 138 3 0 chr17 38285062 38285372 -51219181 + AluSx SINE Alu 1 311 0 270 188 60 128 chr17 38285372 38285476 -51219077 + MIR SINE MIR 168 262 0 428 251 74 12 chr17 38285907 38286044 -51218509 - MIR SINE MIR -59 149 3 285 247 62 0 chr17 38286154 38286235 -51218318 + MIR SINE MIR 137 222 -40 389 319 37 37 chr17 38286245 38286408 -51218145 + L2 LINE L2 3102 3264 -8 300 254 29 60 chr17 38286870 38287025 -51217528 + MIR SINE MIR 42 191 -61 236 157 39 0 chr17 38287114 38287165 -51217388 + CT-rich Low_complexity Low_complexity 2 54 0 392 283 48 24 chr17 38287276 38287442 -51217111 + MIR SINE MIR 23 192 -70 277 217 0 0 chr17 38287563 38287609 -51216944 - L2 LINE L2 -2 3270 3225 191 311 0 0 chr17 38287613 38287658 -51216895 - L2 LINE L2 -3 3269 3225 342 258 51 84 chr17 38288230 38288408 -51216145 - MIR SINE MIR -71 191 20 303 333 30 0 chr17 38288399 38288498 -51216055 + MIR3 SINE MIR 85 186 -22 * 1189 157 98 0 chr17 38288527 38288731 -51215822 + MER58A DNA MER1_type 1 224 0 2396 82 7 0 chr17 38288855 38289158 -51215395 - AluY SINE Alu -6 305 1 445 184 124 5 chr17 38289215 38289398 -51215155 - L1ME2 LINE L1 -16 6148 5886 1689 159 48 24 chr17 38289407 38289696 -51214857 - AluJo SINE Alu -15 297 2 331 261 113 26 chr17 38289738 38289853 -51214700 - L2 LINE L2 -1 3312 3188 219 274 84 11 chr17 38289975 38290070 -51214483 - MIR3 SINE MIR 0 208 107 498 256 117 22 chr17 38290787 38290967 -51213586 - MIR SINE MIR -64 198 2 182 353 39 20 chr17 38291075 38291177 -51213376 + MIR SINE MIR 48 151 -111 275 263 10 0 chr17 38292590 38292688 -51211865 - MIR SINE MIR -62 146 94 22 0 0 0 chr17 38297660 38297682 -51206871 + AT_rich Low_complexity Low_complexity 1 22 0 2135 112 10 14 chr17 38298780 38299075 -51205478 + AluSq SINE Alu 1 294 -19 180 97 0 0 chr17 38299075 38299106 -51205447 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 187 260 58 106 chr17 38300029 38300133 -51204420 + L3b LINE CR1 1435 1533 -50 2274 82 3 38 chr17 38301161 38301501 -51203052 - AluY SINE Alu 0 311 3 425 323 82 76 chr17 38301549 38301852 -51202701 - L2 LINE L2 0 3272 2968 727 294 63 8 chr17 38302486 38302724 -51201829 + MIR SINE MIR 12 262 0 1859 140 10 40 chr17 38302985 38303285 -51201268 + AluJo SINE Alu 5 295 -17 327 280 98 15 chr17 38303686 38303818 -51200735 + L3 LINE CR1 1403 1545 -32 2352 100 0 3 chr17 38303959 38304259 -51200294 + AluSq SINE Alu 1 299 -14 234 0 0 0 chr17 38305152 38305178 -51199375 + (TCTG)n Simple_repeat Simple_repeat 1 26 0 417 187 112 9 chr17 38305655 38305762 -51198791 - MER103 DNA DNA -13 153 36 1081 96 0 20 chr17 38306068 38306214 -51198339 + FLAM_C SINE Alu 1 143 0 653 167 42 0 chr17 38306237 38306357 -51198196 - FLAM_C SINE Alu -7 126 2 485 280 25 0 chr17 38309215 38309333 -51195220 - MIR SINE MIR -68 140 20 203 330 50 30 chr17 38309339 38309439 -51195114 - L2 LINE L2 -32 3240 3139 956 161 0 0 chr17 38309592 38309741 -51194812 - FRAM SINE Alu -6 170 22 406 265 60 0 chr17 38309874 38309991 -51194562 + MIR SINE MIR 84 207 -55 2600 44 0 0 chr17 38310443 38310738 -51193815 + AluY SINE Alu 1 295 -16 2185 108 0 35 chr17 38310747 38311062 -51193491 + AluSx SINE Alu 1 304 -8 495 346 14 37 chr17 38312587 38312801 -51191752 - MIR SINE MIR -2 260 52 225 0 0 0 chr17 38312891 38312916 -51191637 + (CA)n Simple_repeat Simple_repeat 2 26 0 203 88 29 0 chr17 38314082 38314116 -51190437 + (TA)n Simple_repeat Simple_repeat 2 36 0 * 273 57 0 0 chr17 38314115 38314150 -51190403 + (CA)n Simple_repeat Simple_repeat 2 36 0 1441 165 81 28 chr17 38314250 38314572 -51189981 - MER58B DNA MER1_type 0 341 3 588 252 90 13 chr17 38314581 38314736 -51189817 + MER5B DNA MER1_type 1 167 -11 523 217 159 25 chr17 38314748 38314905 -51189648 - MER5A DNA MER1_type -6 183 6 505 280 122 11 chr17 38315015 38315204 -51189349 + MIR SINE MIR 9 218 -44 201 218 0 36 chr17 38315257 38315312 -51189241 + CT-rich Low_complexity Low_complexity 3 55 0 2550 44 6 25 chr17 38315648 38315965 -51188588 - AluY SINE Alu 0 311 1 304 253 300 20 chr17 38316558 38316708 -51187845 + MIR SINE MIR 37 228 -34 238 253 38 108 chr17 38316909 38317067 -51187486 + MER5A DNA MER1_type 3 149 -29 510 137 0 0 chr17 38317073 38317146 -51187407 + FRAM SINE Alu 26 98 -78 420 151 0 0 chr17 38317241 38317314 -51187239 + Alu SINE Alu 238 310 -2 298 270 264 6 chr17 38317420 38317579 -51186974 + MIR3 SINE MIR 8 207 -1 189 175 0 0 chr17 38317674 38317714 -51186839 + CT-rich Low_complexity Low_complexity 1 40 0 367 330 17 9 chr17 38318255 38318370 -51186183 + L2 LINE L2 3152 3267 -5 212 130 0 43 chr17 38318478 38318524 -51186029 + (TA)n Simple_repeat Simple_repeat 1 44 0 234 156 0 0 chr17 38319019 38319064 -51185489 + (ATGGTG)n Simple_repeat Simple_repeat 4 48 0 1395 169 56 16 chr17 38319799 38319879 -51184674 + AluJo SINE Alu 41 116 -196 261 57 0 0 chr17 38319879 38319914 -51184639 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1395 169 56 16 chr17 38319914 38320082 -51184471 + AluJo SINE Alu 116 299 -13 438 243 140 29 chr17 38320206 38320342 -51184211 - L2 LINE L2 0 3313 3163 372 22 0 0 chr17 38322133 38322178 -51182375 + (GA)n Simple_repeat Simple_repeat 2 46 0 2184 116 0 3 chr17 38322522 38322814 -51181739 + AluSx SINE Alu 1 291 -21 2166 102 0 58 chr17 38322858 38323171 -51181382 - AluSx SINE Alu -17 295 1 202 221 191 15 chr17 38323699 38323767 -51180786 - L2 LINE L2 0 3313 3234 344 305 190 14 chr17 38323945 38324240 -51180313 - L2 LINE L2 -346 2968 2622 301 103 0 0 chr17 38324689 38324728 -51179825 + L2 LINE L2 3255 3293 -20 710 283 81 18 chr17 38324790 38325013 -51179540 - MIR SINE MIR -6 256 20 234 367 13 0 chr17 38325348 38325427 -51179126 - MIR3 SINE MIR -119 89 10 24 0 0 0 chr17 38325651 38325675 -51178878 + AT_rich Low_complexity Low_complexity 1 24 0 545 278 76 10 chr17 38326193 38326391 -51178162 - MIR SINE MIR -39 223 13 448 244 59 22 chr17 38326399 38326534 -51178019 - L3 LINE CR1 -188 1389 1250 546 160 92 59 chr17 38328052 38328171 -51176382 - L2 LINE L2 0 3313 3191 574 308 99 9 chr17 38329094 38329305 -51175248 + MIR SINE MIR 20 249 -13 1838 158 16 29 chr17 38329465 38329781 -51174772 + AluSx SINE Alu 1 312 0 555 207 171 8 chr17 38330841 38330999 -51173554 + MIR SINE MIR 6 185 -61 499 293 144 6 chr17 38331298 38331479 -51173074 + MIR SINE MIR 2 207 -55 1977 172 3 0 chr17 38331605 38331913 -51172640 + AluJo SINE Alu 1 309 -3 326 331 16 33 chr17 38331994 38332115 -51172438 + MIR SINE MIR 48 166 -96 189 0 0 0 chr17 38332325 38332346 -51172207 + (T)n Simple_repeat Simple_repeat 1 21 0 2213 125 0 0 chr17 38332764 38333061 -51171492 + AluSx SINE Alu 1 297 -15 426 349 125 20 chr17 38333134 38333429 -51171124 + L1 LINE L1 4018 4343 -1803 542 202 0 10 chr17 38333599 38333698 -51170855 + L2 LINE L2 3195 3292 -21 850 167 15 0 chr17 38333703 38333835 -51170718 - FLAM_C SINE Alu -9 134 1 315 302 130 9 chr17 38334307 38334415 -51170138 + MIR SINE MIR 46 164 -44 565 232 32 74 chr17 38336150 38336340 -51168213 - MER5A DNA MER1_type 0 189 8 229 267 58 35 chr17 38337620 38337706 -51166847 + MIR SINE MIR 45 132 -76 554 299 71 16 chr17 38338854 38339038 -51165515 + MIR SINE MIR 21 214 -48 21 36 0 0 chr17 38339043 38339071 -51165482 + AT_rich Low_complexity Low_complexity 1 28 0 307 224 222 0 chr17 38341017 38341134 -51163419 + MIR SINE MIR 49 147 -61 372 316 29 15 chr17 38341830 38341966 -51162587 - MIR3 SINE MIR -49 159 22 1642 143 159 50 chr17 38342339 38342557 -51161996 - MSTB LTR MaLR -7 419 226 1954 145 30 3 chr17 38342557 38342860 -51161693 - AluJb SINE Alu -1 311 1 1642 143 159 50 chr17 38342860 38343019 -51161534 - MSTB LTR MaLR -200 226 1 8330 157 65 16 chr17 38343019 38344560 -51159993 - MSTB-int LTR MaLR 0 1651 34 2142 100 11 4 chr17 38344594 38344873 -51159680 - AluSq SINE Alu -32 281 1 269 149 21 0 chr17 38344873 38344920 -51159633 - MSTB-int LTR MaLR -1602 49 2 2599 143 52 5 chr17 38344921 38345328 -51159225 - MSTB LTR MaLR 0 426 1 367 172 75 32 chr17 38345366 38345459 -51159094 + MER103 DNA DNA 3 99 -67 367 265 139 8 chr17 38345533 38345730 -51158823 + MIR SINE MIR 4 244 -18 2317 115 0 3 chr17 38345805 38346110 -51158443 - AluSg SINE Alu -6 304 1 190 352 0 0 chr17 38346329 38346383 -51158170 + L2 LINE L2 3200 3253 -19 198 103 0 0 chr17 38346389 38346418 -51158135 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 354 338 49 36 chr17 38346421 38346646 -51157907 - MIR SINE MIR -6 256 29 193 320 26 26 chr17 38346698 38346776 -51157777 - MIR SINE MIR -167 95 18 753 307 40 9 chr17 38347222 38347447 -51157106 + MIR SINE MIR 12 243 -19 337 207 12 24 chr17 38347601 38347683 -51156870 + MIR SINE MIR 73 153 -109 2318 282 139 29 chr17 38347742 38348978 -51155575 + L2 LINE L2 1786 3179 -134 243 0 0 0 chr17 38348978 38349005 -51155548 + (TG)n Simple_repeat Simple_repeat 1 27 0 2318 282 139 29 chr17 38349005 38349153 -51155400 + L2 LINE L2 3179 3309 -4 397 315 8 8 chr17 38349141 38349268 -51155285 + MIR SINE MIR 134 260 -2 * 2325 118 0 0 chr17 38349838 38350144 -51154409 - AluSg SINE Alu -4 306 1 458 211 226 8 chr17 38350218 38350351 -51154202 - MIR SINE MIR -32 230 69 322 291 42 48 chr17 38350367 38350532 -51154021 + MIR SINE MIR 15 178 -84 378 0 0 0 chr17 38350586 38350628 -51153925 + (TG)n Simple_repeat Simple_repeat 2 43 0 518 278 106 0 chr17 38351048 38351199 -51153354 + MER5A DNA MER1_type 22 188 -1 499 240 8 25 chr17 38354432 38354553 -51150000 + MIR SINE MIR 102 220 -42 1192 224 113 82 chr17 38355813 38356019 -51148534 - L2 LINE L2 -1 3312 3114 2556 66 7 0 chr17 38356019 38356324 -51148229 + AluSp SINE Alu 1 307 -6 1192 224 113 82 chr17 38356324 38356372 -51148181 - L2 LINE L2 -199 3114 3069 2241 116 0 22 chr17 38356372 38356691 -51147862 - AluSx SINE Alu 0 312 1 1192 224 113 82 chr17 38356691 38357291 -51147262 - L2 LINE L2 -244 3069 2434 1935 154 26 3 chr17 38357317 38357622 -51146931 + AluJo SINE Alu 1 312 0 1341 154 75 161 chr17 38357809 38358086 -51146467 - MSTB LTR MaLR 0 426 204 7697 32 0 0 chr17 38358086 38359480 -51145073 - L1PA5 LINE L1 -6 6148 4754 1341 154 75 161 chr17 38359480 38359668 -51144885 - MSTB LTR MaLR -222 204 1 496 263 51 81 chr17 38359669 38359905 -51144648 - L2 LINE L2 -10 3303 3075 1604 204 124 32 chr17 38360055 38360516 -51144037 - MLT1D LTR MaLR -2 503 1 681 190 190 32 chr17 38360857 38361078 -51143475 + MIR SINE MIR 5 260 -2 514 250 61 15 chr17 38361132 38361264 -51143289 + L2 LINE L2 3176 3313 0 361 299 118 84 chr17 38361840 38362161 -51142392 - L2 LINE L2 -6 3266 2935 2206 103 0 50 chr17 38363072 38363391 -51141162 + AluSx SINE Alu 1 303 -9 236 121 0 0 chr17 38363669 38363702 -51140851 + Alu SINE Alu 2 34 -274 956 169 0 42 chr17 38363702 38363868 -51140685 + AluSg/x SINE Alu 126 284 -26 357 292 0 26 chr17 38363926 38364039 -51140514 + MIR SINE MIR 88 197 -65 469 297 51 0 chr17 38364318 38364456 -51140097 + L2 LINE L2 3167 3311 -2 2366 87 13 0 chr17 38364751 38365049 -51139504 - AluSx SINE Alu -10 302 1 2530 64 0 0 chr17 38365574 38365869 -51138684 - AluY SINE Alu -16 295 1 272 250 38 25 chr17 38366253 38366333 -51138220 + L2 LINE L2 3191 3271 -1 285 341 49 16 chr17 38366802 38366925 -51137628 + L2 LINE L2 3140 3266 -6 337 289 156 16 chr17 38366942 38367070 -51137483 - L2 LINE L2 -6 3266 3121 2344 96 0 0 chr17 38368635 38368957 -51135596 + AluSx SINE Alu 1 322 0 2311 99 3 0 chr17 38369355 38369692 -51134861 + AluSx SINE Alu 1 338 0 346 260 47 60 chr17 38370176 38370326 -51134227 + MIR SINE MIR 2 149 -113 1043 170 55 89 chr17 38370483 38370754 -51133799 + MIR SINE MIR 1 262 0 2251 115 3 0 chr17 38371121 38371417 -51133136 + AluSx SINE Alu 1 297 -15 344 324 37 32 chr17 38371793 38372077 -51132476 + L3 LINE CR1 670 1026 -551 1963 157 6 10 chr17 38372134 38372447 -51132106 - AluJb SINE Alu 0 312 1 1035 124 0 0 chr17 38372451 38372588 -51131965 - AluJb SINE Alu -175 137 1 468 278 335 8 chr17 38372588 38372958 -51131595 + L3 LINE CR1 1086 1576 -1 572 228 0 0 chr17 38373104 38373205 -51131348 + FRAM SINE Alu 1 101 -75 28 0 0 0 chr17 38423775 38423803 -51080750 + AT_rich Low_complexity Low_complexity 1 28 0 2360 100 0 3 chr17 38423803 38424114 -51080439 - AluSq SINE Alu -3 310 1 2021 137 0 16 chr17 38424349 38424663 -51079890 - AluSx SINE Alu -3 309 1 2282 108 0 0 chr17 38424855 38425151 -51079402 + AluSq SINE Alu 1 296 -17 291 167 0 21 chr17 38425255 38425303 -51079250 + MER4E LTR ERV1 648 694 -72 33 0 0 0 chr17 38425308 38425341 -51079212 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr17 38425450 38425471 -51079082 + AT_rich Low_complexity Low_complexity 1 21 0 1919 153 0 3 chr17 38430392 38430686 -51073867 + AluJb SINE Alu 3 295 -17 2293 88 17 3 chr17 38431131 38431426 -51073127 - AluSp SINE Alu -11 302 4 2264 109 0 22 chr17 38431426 38431746 -51072807 - AluSq SINE Alu 0 313 1 2354 87 0 3 chr17 38432519 38432818 -51071735 + AluSx SINE Alu 1 298 -14 1096 134 0 0 chr17 38434880 38435037 -51069516 - AluSc SINE Alu -23 286 130 2205 98 3 42 chr17 38435050 38435357 -51069196 - AluSp SINE Alu -18 295 1 2369 93 0 7 chr17 38435667 38435977 -51068576 + AluSq SINE Alu 1 308 -5 413 290 62 40 chr17 38436645 38436821 -51067732 - MIR SINE MIR -36 226 47 911 255 79 67 chr17 38438667 38438996 -51065557 + MER102b DNA MER1_type 1 333 -8 2208 124 3 0 chr17 38439348 38439654 -51064899 + AluSx SINE Alu 1 307 -5 1916 149 37 0 chr17 38440611 38440907 -51063646 + AluJb SINE Alu 1 307 -5 2183 90 4 4 chr17 38441388 38441703 -51062850 + AluSg SINE Alu 1 315 0 856 251 27 82 chr17 38442380 38442628 -51061925 + L2 LINE L2 2933 3153 -160 1793 164 0 7 chr17 38442628 38442936 -51061617 - AluJb SINE Alu 0 306 1 856 251 27 82 chr17 38442936 38443088 -51061465 + L2 LINE L2 3153 3312 -1 1122 219 62 0 chr17 38443750 38443992 -51060561 - MIR SINE MIR -2 260 4 942 134 0 7 chr17 38445756 38445898 -51058655 + AluJb SINE Alu 1 141 -171 2241 109 3 28 chr17 38446039 38446359 -51058194 + AluSx SINE Alu 1 312 0 2150 100 38 0 chr17 38446416 38446707 -51057846 + AluSp SINE Alu 12 313 0 22 70 0 0 chr17 38446709 38446752 -51057801 + AT_rich Low_complexity Low_complexity 1 43 0 2141 129 0 3 chr17 38446862 38447164 -51057389 - AluSx SINE Alu -11 301 1 2303 104 3 10 chr17 38447586 38447894 -51056659 - AluSx SINE Alu -6 306 1 341 298 69 38 chr17 38448021 38448152 -51056401 + L2 LINE L2 3138 3272 0 489 249 61 66 chr17 38448181 38448378 -51056175 + L1ME4a LINE L1 5619 5814 -307 255 227 58 71 chr17 38448422 38448484 -51056069 + L1ME4a LINE L1 5970 6031 -90 1989 151 0 10 chr17 38448484 38448788 -51055765 - AluJb SINE Alu -11 301 1 255 227 58 71 chr17 38448788 38448879 -51055674 + L1ME4a LINE L1 6031 6121 0 1553 183 60 0 chr17 38449045 38449313 -51055240 - AluJo SINE Alu -26 286 3 310 180 17 34 chr17 38449955 38450042 -51054511 - MIR SINE MIR -75 187 104 718 236 50 32 chr17 38450738 38450958 -51053595 - L1ME2 LINE L1 0 6164 5941 276 100 0 0 chr17 38451788 38451828 -51052725 + (CTA)n Simple_repeat Simple_repeat 2 41 0 561 166 50 83 chr17 38451904 38452085 -51052468 + MLT1D LTR MaLR 143 317 -188 209 318 175 24 chr17 38452099 38452225 -51052328 - MIR SINE MIR -111 151 7 1548 153 107 55 chr17 38452441 38452768 -51051785 + MER2 DNA MER2_type 1 344 0 2070 170 128 29 chr17 38453349 38453801 -51050752 + MLT1D LTR MaLR 1 497 -8 1488 220 63 33 chr17 38453878 38454135 -51050418 - MLT1I LTR MaLR 0 409 134 2117 109 0 30 chr17 38454135 38454300 -51050253 - AluSx SINE Alu -17 295 142 2402 75 0 0 chr17 38454300 38454594 -51049959 - AluSg SINE Alu -15 295 2 2117 109 0 30 chr17 38454594 38454732 -51049821 - AluSx SINE Alu -170 142 1 1488 220 63 33 chr17 38454732 38454869 -51049684 - MLT1I LTR MaLR -275 134 3 22 35 0 0 chr17 38454986 38455015 -51049538 + AT_rich Low_complexity Low_complexity 1 29 0 894 185 75 48 chr17 38456711 38456821 -51047732 - MER63 DNA MER1_type 0 1061 955 1922 154 7 13 chr17 38456821 38457120 -51047433 + AluJo SINE Alu 1 297 -15 894 185 75 48 chr17 38457120 38457236 -51047317 - MER63 DNA MER1_type -106 955 829 265 161 268 0 chr17 38457239 38457295 -51047258 + MER81 DNA DNA 2 72 -42 * 362 59 0 0 chr17 38457291 38457342 -51047211 - MER63 DNA MER1_type -416 645 595 2388 93 0 0 chr17 38457342 38457643 -51046910 + AluSg SINE Alu 1 301 -9 1165 139 0 0 chr17 38457646 38457818 -51046735 + AluJb SINE Alu 134 305 -7 1509 146 79 8 chr17 38457829 38458082 -51046471 + AluJo SINE Alu 1 271 -41 207 0 0 0 chr17 38458123 38458146 -51046407 + (TG)n Simple_repeat Simple_repeat 2 24 0 198 246 62 0 chr17 38458148 38458213 -51046340 + MIR SINE MIR 185 253 -9 2350 98 10 0 chr17 38458951 38459258 -51045295 + AluSx SINE Alu 1 310 -2 2229 92 20 0 chr17 38463050 38463343 -51041210 - AluSp SINE Alu -14 299 1 813 127 140 95 chr17 38463398 38463619 -51040934 + AluJb SINE Alu 70 300 -12 291 42 0 125 chr17 38464505 38464521 -51040032 + AluSg/x SINE Alu 124 133 -167 2345 61 0 3 chr17 38464521 38464817 -51039736 + AluSq SINE Alu 1 295 -18 225 0 0 0 chr17 38465789 38465814 -51038739 + (T)n Simple_repeat Simple_repeat 1 25 0 1543 132 21 121 chr17 38468361 38468701 -51035852 + AluJb SINE Alu 1 306 -6 2071 106 20 0 chr17 38468701 38468993 -51035560 + AluSx SINE Alu 1 298 -14 206 116 23 0 chr17 38469252 38469295 -51035258 + (TA)n Simple_repeat Simple_repeat 2 45 0 436 251 55 31 chr17 38470367 38470437 -51034116 - L1MA10 LINE L1 0 6334 6265 430 268 47 32 chr17 38470437 38470627 -51033926 - L1ME1 LINE L1 -61 6105 5913 380 235 11 38 chr17 38470631 38470660 -51033893 + L1MC4 LINE L1 6615 6643 -1399 1973 106 0 17 chr17 38470660 38470952 -51033601 + AluSx SINE Alu 1 287 -25 252 0 0 0 chr17 38470956 38470984 -51033569 + (CA)n Simple_repeat Simple_repeat 2 29 0 380 235 11 38 chr17 38470984 38471076 -51033477 + L1MC4 LINE L1 6646 6703 -1339 325 264 11 22 chr17 38471072 38471163 -51033390 + L1MC4 LINE L1 6614 6703 -1339 * 1186 213 84 0 chr17 38471184 38471471 -51033082 - L1ME1 LINE L1 -270 5896 5586 297 118 0 0 chr17 38471492 38471543 -51033010 + (TA)n Simple_repeat Simple_repeat 1 51 0 2027 117 0 0 chr17 38471543 38471826 -51032727 - AluSx SINE Alu -29 283 1 474 238 158 6 chr17 38471856 38472020 -51032533 - MER5A DNA MER1_type 0 189 1 306 232 27 71 chr17 38472099 38472211 -51032342 + LTR16A LTR ERVL 103 209 -241 1767 99 56 0 chr17 38472544 38472796 -51031757 + AluSx SINE Alu 6 271 -41 1929 127 0 7 chr17 38474013 38474297 -51030256 - AluSx SINE Alu -30 282 1 198 0 0 0 chr17 38474620 38474642 -51029911 + (A)n Simple_repeat Simple_repeat 1 22 0 617 200 178 0 chr17 38474897 38475032 -51029521 - AluSg/x SINE Alu -17 293 135 657 147 0 9 chr17 38475061 38475170 -51029383 + AluJb SINE Alu 26 133 -179 1427 140 0 0 chr17 38475171 38475393 -51029160 + AluSg/x SINE Alu 86 307 -5 1357 177 59 15 chr17 38475397 38475668 -51028885 + AluJb SINE Alu 1 283 -29 2211 97 0 10 chr17 38476069 38476369 -51028184 - AluSx SINE Alu -15 297 1 1562 243 32 80 chr17 38476765 38476832 -51027721 + MLT1G1 LTR MaLR 5 74 -521 1730 169 0 3 chr17 38476832 38477133 -51027420 - AluJb SINE Alu -10 302 3 1562 243 32 80 chr17 38477133 38477244 -51027309 + MLT1G1 LTR MaLR 74 189 -406 643 220 94 0 chr17 38477244 38477403 -51027150 + FAM SINE Alu 1 174 -1 1562 243 32 80 chr17 38477403 38477749 -51026804 + MLT1G1 LTR MaLR 189 505 -90 1486 197 3 10 chr17 38477794 38478088 -51026465 + AluJo SINE Alu 1 292 -20 2096 100 14 3 chr17 38478461 38478750 -51025803 + AluSq SINE Alu 1 292 -21 419 222 201 14 chr17 38478836 38478980 -51025573 + MER5A DNA MER1_type 13 183 -6 184 333 0 13 chr17 38479154 38479232 -51025321 - MIR SINE MIR -80 128 52 2171 80 3 3 chr17 38480448 38480760 -51023793 + AluSq SINE Alu 1 312 0 932 144 6 33 chr17 38480774 38480955 -51023598 + FRAM SINE Alu 1 176 0 945 113 75 24 chr17 38480966 38481270 -51023283 + THE1C LTR MaLR 1 375 0 492 255 21 35 chr17 38481326 38481467 -51023086 + MER5A DNA MER1_type 7 145 -44 2615 39 0 0 chr17 38481652 38481963 -51022590 + AluY SINE Alu 1 311 0 1774 133 28 14 chr17 38482218 38482504 -51022049 - AluJb SINE Alu -16 296 7 1572 162 68 0 chr17 38482520 38482798 -51021755 - AluJb SINE Alu -15 297 1 1913 129 28 0 chr17 38482837 38483124 -51021429 + AluSx SINE Alu 1 295 -17 1994 118 0 58 chr17 38483333 38483511 -51021042 - AluSx SINE Alu -1 311 159 1985 123 3 0 chr17 38483511 38483804 -51020749 - AluSg SINE Alu -16 294 1 1994 118 0 58 chr17 38483804 38483954 -51020599 - AluSx SINE Alu -153 159 2 2383 81 0 0 chr17 38484320 38484629 -51019924 + AluSc SINE Alu 1 309 0 219 36 0 0 chr17 38484790 38484818 -51019735 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 203 255 0 0 chr17 38485636 38485683 -51018870 + CT-rich Low_complexity Low_complexity 1 47 0 634 200 16 0 chr17 38485779 38485904 -51018649 + FLAM_A SINE Alu 11 137 -5 2472 57 0 0 chr17 38485985 38486283 -51018270 + AluY SINE Alu 1 298 -13 342 181 37 0 chr17 38486829 38486908 -51017645 + L1ME3A LINE L1 5532 5615 -555 442 248 135 0 chr17 38486913 38487015 -51017538 + L1ME3A LINE L1 5705 5832 -338 971 87 0 36 chr17 38487015 38487153 -51017400 + FLAM_C SINE Alu 1 133 0 442 248 135 0 chr17 38487153 38487191 -51017362 + L1ME3A LINE L1 5832 5864 -306 309 109 0 0 chr17 38487239 38487285 -51017268 + (CA)n Simple_repeat Simple_repeat 2 47 0 221 314 85 51 chr17 38487655 38487773 -51016780 + L2 LINE L2 3147 3268 -4 247 282 54 49 chr17 38489115 38489278 -51015275 - MIR SINE MIR -60 148 18 188 298 10 87 chr17 38489420 38489524 -51015029 + MIR SINE MIR 111 206 -56 28 48 0 0 chr17 38490035 38490077 -51014476 + GC_rich Low_complexity Low_complexity 1 42 0 207 0 0 0 chr17 38490319 38490342 -51014211 + (CGCGG)n Simple_repeat Simple_repeat 1 23 0 32 111 0 0 chr17 38490392 38490536 -51014017 + GC_rich Low_complexity Low_complexity 1 144 0 1176 138 67 0 chr17 38492255 38492450 -51012103 + MER3 DNA MER1_type 1 208 -1 1429 167 51 31 chr17 38492491 38492648 -51011905 - AluJb SINE Alu -11 301 134 1853 86 75 14 chr17 38492648 38492927 -51011626 - AluSp SINE Alu -17 296 1 1429 167 51 31 chr17 38492927 38493063 -51011490 - AluJb SINE Alu -178 134 2 372 145 0 0 chr17 38494452 38494514 -51010039 - AluSx SINE Alu -2 300 239 1084 101 5 74 chr17 38494514 38494625 -51009928 - AluSx SINE Alu -136 176 82 2294 54 9 31 chr17 38494625 38494942 -51009611 + AluY SINE Alu 1 310 -1 1084 101 5 74 chr17 38494942 38495019 -51009534 - AluSx SINE Alu -230 82 1 313 266 191 0 chr17 38495019 38495145 -51009408 - MIR SINE MIR -72 190 42 1220 94 0 6 chr17 38495239 38495409 -51009144 - AluSp SINE Alu -8 305 137 1833 136 0 10 chr17 38495449 38495744 -51008809 + AluSx SINE Alu 5 296 -16 2233 93 0 3 chr17 38495745 38496047 -51008506 + AluSx SINE Alu 1 301 -11 191 254 0 36 chr17 38496586 38496641 -51007912 + L2 LINE L2 3239 3291 -22 2139 100 0 29 chr17 38497615 38497924 -51006629 - AluSx SINE Alu -12 300 1 1779 131 21 3 chr17 38499013 38499295 -51005258 - AluSx SINE Alu -16 296 10 1455 201 7 13 chr17 38499431 38499734 -51004819 - AluJb SINE Alu -11 301 1 2171 97 13 0 chr17 38502138 38502437 -51002116 - AluSg SINE Alu -7 303 1 2154 107 7 0 chr17 38502515 38502813 -51001740 + AluSq SINE Alu 1 300 -13 298 296 92 83 chr17 38504361 38504515 -51000038 - MARNA DNA Mariner -173 413 262 1937 105 45 0 chr17 38504515 38504801 -50999752 + AluSx SINE Alu 1 299 -13 2121 111 0 19 chr17 38504803 38505119 -50999434 + AluSg SINE Alu 1 310 0 298 296 92 83 chr17 38505119 38505309 -50999244 - MARNA DNA Mariner -324 262 63 269 333 102 0 chr17 38505192 38505339 -50999214 + MARNA DNA Mariner 394 555 -31 * 266 200 100 0 chr17 38505339 38505399 -50999154 + MIR SINE MIR 197 262 0 988 169 0 0 chr17 38506022 38506188 -50998365 - AluJb SINE Alu -12 300 135 1525 186 6 44 chr17 38507006 38507323 -50997230 + AluJo SINE Alu 1 305 -7 1925 130 7 20 chr17 38507405 38507705 -50996848 - AluSx SINE Alu -16 296 1 2235 92 0 0 chr17 38507914 38508208 -50996345 + AluSx SINE Alu 1 294 -18 2169 105 7 0 chr17 38508474 38508779 -50995774 + AluSx SINE Alu 1 307 -5 328 300 39 23 chr17 38510104 38510234 -50994319 - L1ME4a LINE L1 -35 6086 5955 2310 68 3 0 chr17 38510632 38510928 -50993625 - AluSp SINE Alu -16 297 1 2037 118 0 20 chr17 38511074 38511380 -50993173 + AluSx SINE Alu 2 301 -11 401 319 97 21 chr17 38511494 38511613 -50992940 - MIR SINE MIR -6 256 147 882 143 0 0 chr17 38511613 38511746 -50992807 + FLAM_C SINE Alu 1 133 0 401 319 97 21 chr17 38511746 38511864 -50992689 - MIR SINE MIR -115 147 1 474 304 175 0 chr17 38511873 38512044 -50992509 + MIR SINE MIR 60 260 -2 1909 152 0 0 chr17 38512184 38512480 -50992073 - AluSx SINE Alu -16 296 1 2004 112 17 7 chr17 38513109 38513405 -50991148 - AluSx SINE Alu -12 300 2 1932 145 3 0 chr17 38513851 38514141 -50990412 - AluJb SINE Alu -21 291 1 978 154 18 72 chr17 38514264 38514485 -50990068 + L1MC5 LINE L1 7702 7910 -51 2250 102 0 3 chr17 38515120 38515415 -50989138 - AluSx SINE Alu -18 294 1 2207 98 10 7 chr17 38515426 38515722 -50988831 - AluSx SINE Alu -15 297 1 1422 94 0 33 chr17 38516291 38516504 -50988049 - AluY SINE Alu 0 311 106 768 171 47 0 chr17 38516504 38516633 -50987920 + AluSp/q SINE Alu 170 304 -9 975 121 8 0 chr17 38516690 38516822 -50987731 - FRAM SINE Alu -45 131 1 776 196 63 13 chr17 38517153 38517311 -50987242 + FRAM SINE Alu 1 166 0 2138 101 0 17 chr17 38517614 38517933 -50986620 - AluSg SINE Alu 0 314 1 342 244 17 50 chr17 38517946 38518065 -50986488 - MER5A DNA MER1_type -9 180 66 224 175 0 0 chr17 38518412 38518452 -50986101 + L2 LINE L2 3274 3313 0 1942 135 103 19 chr17 38518934 38519245 -50985308 + MER1B DNA MER1_type 1 337 0 783 218 0 0 chr17 38519298 38519431 -50985122 - FLAM_A SINE Alu 0 133 1 2051 132 10 6 chr17 38519735 38520046 -50984507 + AluSx SINE Alu 1 312 0 1670 135 0 111 chr17 38520068 38520199 -50984354 + AluJo SINE Alu 3 147 -165 2444 81 0 0 chr17 38520199 38520496 -50984057 - AluSx SINE Alu -15 297 1 1670 135 0 111 chr17 38520496 38520697 -50983856 + AluJo SINE Alu 147 298 -14 2056 153 0 0 chr17 38520697 38521005 -50983548 + AluSx SINE Alu 1 308 -4 235 323 0 0 chr17 38521172 38521262 -50983291 - MIR SINE MIR -62 146 65 1781 163 3 3 chr17 38521303 38521585 -50982968 + AluJb SINE Alu 1 282 -30 405 54 0 0 chr17 38521588 38521644 -50982909 + (CA)n Simple_repeat Simple_repeat 1 56 0 186 83 21 42 chr17 38521772 38521820 -50982733 + (TA)n Simple_repeat Simple_repeat 2 48 0 2871 76 3 0 chr17 38522004 38522359 -50982194 + L1PA13 LINE L1 5805 6160 -3 2200 114 10 3 chr17 38522486 38522793 -50981760 + AluSx SINE Alu 1 309 -3 2090 153 0 0 chr17 38522801 38523108 -50981445 + AluSx SINE Alu 1 307 -5 263 314 67 62 chr17 38523886 38524071 -50980482 + L2 LINE L2 2646 2834 -480 2208 111 14 0 chr17 38524071 38524360 -50980193 - AluSx SINE Alu -19 293 1 263 314 67 62 chr17 38524360 38524384 -50980169 + L2 LINE L2 2834 2856 -458 344 227 13 0 chr17 38524411 38524486 -50980067 - MIR SINE MIR -157 105 30 2262 88 0 10 chr17 38524601 38524941 -50979612 + AluY SINE Alu 1 311 0 21 0 0 0 chr17 38524951 38524972 -50979581 + AT_rich Low_complexity Low_complexity 1 21 0 2302 89 20 0 chr17 38525689 38525993 -50978560 + AluSg SINE Alu 1 310 0 2494 73 0 10 chr17 38526208 38526522 -50978031 + AluSq SINE Alu 1 311 -2 183 325 0 25 chr17 38527826 38527870 -50976683 - MIR SINE MIR 0 262 219 2225 103 3 0 chr17 38527870 38528160 -50976393 - AluSx SINE Alu -21 291 1 183 325 0 25 chr17 38528160 38528195 -50976358 - MIR SINE MIR -43 219 185 2259 104 7 0 chr17 38528283 38528580 -50975973 - AluSq SINE Alu -14 299 1 1834 151 19 19 chr17 38528660 38528971 -50975582 + AluJb SINE Alu 1 311 -1 1629 154 4 36 chr17 38528971 38529251 -50975302 + AluJo SINE Alu 22 292 -20 1454 113 80 0 chr17 38530088 38530301 -50974252 - MER30 DNA MER1_type 0 230 1 242 322 110 0 chr17 38530303 38530421 -50974132 + MIR SINE MIR 91 221 -41 1503 125 0 9 chr17 38530446 38530662 -50973891 + AluJo SINE Alu 87 300 -12 862 228 145 4 chr17 38530683 38530911 -50973642 + MIR SINE MIR 3 262 0 2583 53 0 3 chr17 38530961 38531264 -50973289 + AluY SINE Alu 1 302 -9 802 171 0 23 chr17 38532657 38532786 -50971767 - FLAM_C SINE Alu -3 130 5 1857 153 24 0 chr17 38532827 38533122 -50971431 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr17 38533640 38533670 -50970883 + AT_rich Low_complexity Low_complexity 1 30 0 923 141 0 0 chr17 38533672 38533800 -50970753 - FLAM_C SINE Alu -5 128 1 2234 116 0 0 chr17 38534716 38535019 -50969534 + AluSx SINE Alu 1 303 -9 365 269 56 19 chr17 38535388 38535496 -50969057 + L2 LINE L2 3188 3299 -14 716 229 8 0 chr17 38535863 38535994 -50968559 + FLAM_A SINE Alu 1 132 -1 1815 148 0 68 chr17 38536003 38536328 -50968225 - AluJo SINE Alu -9 303 1 865 255 82 5 chr17 38536470 38536678 -50967875 + MER58A DNA MER1_type 1 224 0 2306 109 0 3 chr17 38536729 38537031 -50967522 + AluSq SINE Alu 1 301 -12 1826 173 7 0 chr17 38537106 38537401 -50967152 - AluJb SINE Alu -15 297 1 198 0 0 0 chr17 38538062 38538084 -50966469 + (A)n Simple_repeat Simple_repeat 1 22 0 311 377 34 17 chr17 38538090 38538265 -50966288 + MIR SINE MIR 20 197 -65 2125 122 0 3 chr17 38538319 38538614 -50965939 + AluSg SINE Alu 3 296 -14 2040 146 0 7 chr17 38539169 38539470 -50965083 - AluSx SINE Alu -13 299 1 2139 79 25 14 chr17 38540042 38540376 -50964177 + AluSp SINE Alu 1 337 0 302 305 30 54 chr17 38540528 38540695 -50963858 - MIR SINE MIR -10 252 90 1707 184 0 0 chr17 38540700 38541004 -50963549 + AluJb SINE Alu 1 304 0 980 178 18 0 chr17 38541009 38541172 -50963381 + FRAM SINE Alu 1 158 -18 180 398 11 11 chr17 38541728 38541821 -50962732 + MIR SINE MIR 32 124 -84 2137 122 0 0 chr17 38542596 38542890 -50961663 + AluSx SINE Alu 1 294 -18 2505 57 0 25 chr17 38542892 38543206 -50961347 + AluY SINE Alu 1 306 -5 2130 119 7 0 chr17 38543624 38543926 -50960627 + AluSx SINE Alu 1 304 -8 869 154 0 7 chr17 38544267 38544403 -50960150 + AluJb SINE Alu 1 135 -177 1794 159 21 0 chr17 38544403 38544693 -50959860 + AluJb SINE Alu 1 296 -16 2361 64 0 0 chr17 38544695 38545016 -50959537 + AluY SINE Alu 1 321 0 343 288 32 8 chr17 38545019 38545144 -50959409 + L1MC4a LINE L1 6545 6672 -1136 1447 69 6 0 chr17 38545144 38545317 -50959236 - AluSp SINE Alu -138 175 2 826 207 178 55 chr17 38545317 38545769 -50958784 + L1MC5 LINE L1 6820 7423 -538 525 255 82 48 chr17 38545783 38545959 -50958594 + MER21B LTR ERV1 313 531 -400 1998 162 87 58 chr17 38545960 38546317 -50958236 + L1MD3 LINE L1 7471 7816 -179 2088 135 0 3 chr17 38546317 38546613 -50957940 - AluSx SINE Alu -17 295 1 1592 208 3 3 chr17 38546614 38546908 -50957645 - AluJo SINE Alu -18 294 1 1998 162 87 58 chr17 38546908 38547029 -50957524 + L1MD3 LINE L1 7815 7965 -30 816 171 0 0 chr17 38547032 38547149 -50957404 + AluJb SINE Alu 2 118 -194 24 67 0 0 chr17 38547155 38547200 -50957353 + AT_rich Low_complexity Low_complexity 1 45 0 326 223 58 58 chr17 38547215 38547336 -50957217 + L1MC5 LINE L1 7471 7591 -370 180 0 0 0 chr17 38547336 38547356 -50957197 + (A)n Simple_repeat Simple_repeat 1 20 0 2456 193 20 64 chr17 38547356 38547820 -50956733 + L1ME2 LINE L1 5423 5857 -307 2217 100 10 10 chr17 38547820 38548129 -50956424 + AluSx SINE Alu 3 311 -1 2456 193 20 64 chr17 38548129 38548259 -50956294 + L1ME2 LINE L1 5857 5991 -173 534 249 6 36 chr17 38548335 38548419 -50956134 + L1MC5 LINE L1 7717 7795 -166 2129 119 30 0 chr17 38548419 38548722 -50955831 + AluSx SINE Alu 1 312 0 534 249 6 36 chr17 38548722 38548802 -50955751 + L1MC5 LINE L1 7795 7876 -85 580 207 44 7 chr17 38548964 38549099 -50955454 + MLT1H1 LTR MaLR 416 555 0 236 325 44 26 chr17 38549586 38549700 -50954853 + MER5B DNA MER1_type 63 178 0 810 144 0 0 chr17 38550703 38550821 -50953732 + AluJb SINE Alu 1 118 -194 29 28 0 0 chr17 38550821 38550857 -50953696 + AT_rich Low_complexity Low_complexity 1 36 0 572 216 7 68 chr17 38550884 38551032 -50953521 + MLT1E2 LTR MaLR 62 200 -424 730 145 0 60 chr17 38551046 38551163 -50953390 + FLAM_C SINE Alu 2 111 -32 2528 84 0 0 chr17 38551211 38551520 -50953033 - AluY SINE Alu -2 309 1 973 164 20 0 chr17 38551536 38551688 -50952865 + AluJb SINE Alu 131 285 -27 1459 212 62 44 chr17 38551733 38552138 -50952415 + MLT1E2 LTR MaLR 207 618 -8 2131 132 0 7 chr17 38552292 38552587 -50951966 - AluSx SINE Alu -19 293 1 977 170 0 0 chr17 38553429 38553582 -50950971 - FRAM SINE Alu -19 157 5 2110 117 17 3 chr17 38553595 38553895 -50950658 - AluSg SINE Alu -4 306 3 190 254 0 109 chr17 38554036 38554091 -50950462 + MIR SINE MIR 21 69 -193 244 159 0 0 chr17 38554094 38554138 -50950415 + HsTC2 DNA Tc2 1 44 -1854 873 179 6 13 chr17 38554145 38554301 -50950252 + FRAM SINE Alu 1 155 -21 21 36 0 0 chr17 38554304 38554332 -50950221 + AT_rich Low_complexity Low_complexity 1 28 0 1532 181 0 29 chr17 38554352 38554633 -50949920 + AluJo SINE Alu 25 297 -15 436 259 30 8 chr17 38554634 38554765 -50949788 + MER104 DNA Tc2 47 180 0 838 227 16 0 chr17 38554765 38554950 -50949603 + MIR SINE MIR 75 262 0 1925 127 3 59 chr17 38555105 38555427 -50949126 + AluSx SINE Alu 1 304 -8 2320 84 3 7 chr17 38555428 38555737 -50948816 + AluSp SINE Alu 1 308 -5 372 109 0 0 chr17 38555755 38555810 -50948743 - Alu SINE Alu -5 297 243 861 98 0 0 chr17 38555814 38555926 -50948627 + AluSc SINE Alu 182 293 -16 1324 111 5 58 chr17 38555926 38556134 -50948419 - AluSq SINE Alu -116 197 1 2269 129 0 0 chr17 38556237 38556547 -50948006 + AluSg SINE Alu 1 310 0 1767 179 29 0 chr17 38557048 38557328 -50947225 - AluJo SINE Alu -24 288 1 1725 152 22 0 chr17 38557484 38557803 -50946750 + AluSx SINE Alu 1 325 0 2106 131 0 16 chr17 38557804 38557941 -50946612 + AluSx SINE Alu 1 139 -173 2282 104 0 0 chr17 38557941 38558239 -50946314 + AluSg SINE Alu 1 298 -12 2106 131 0 16 chr17 38558239 38558414 -50946139 + AluSx SINE Alu 139 308 -4 1624 175 0 55 chr17 38558483 38558792 -50945761 - AluJb SINE Alu -20 292 1 1342 193 71 4 chr17 38558903 38559172 -50945381 - AluJb SINE Alu -25 287 1 1959 157 0 0 chr17 38559528 38559821 -50944732 - AluSx SINE Alu -18 294 2 1733 204 138 67 chr17 38559821 38560429 -50944124 - MER20B DNA MER1_type -109 674 24 281 321 0 9 chr17 38560446 38560555 -50943998 + L1MC/D LINE L1 5775 5882 -1926 259 111 0 0 chr17 38560576 38560621 -50943932 - AluSp/q SINE Alu 0 303 259 331 190 17 0 chr17 38560721 38560779 -50943774 - AluJ/FLAM SINE Alu -237 65 7 2243 127 0 0 chr17 38561207 38561514 -50943039 + AluSq SINE Alu 6 312 -1 711 158 0 0 chr17 38561620 38561721 -50942832 - FLAM_C SINE Alu -36 107 7 1981 99 16 53 chr17 38562047 38562350 -50942203 - AluSg SINE Alu -18 292 1 1434 235 122 64 chr17 38562352 38562766 -50941787 + L1MC4 LINE L1 5518 5907 -2135 2114 133 36 0 chr17 38562766 38563068 -50941485 + AluSq SINE Alu 1 313 0 1434 235 122 64 chr17 38563068 38563753 -50940800 + L1MC4 LINE L1 5907 7090 -952 2630 125 8 5 chr17 38563757 38564148 -50940405 + L1PA15 LINE L1 5766 6157 -8 937 182 6 29 chr17 38564236 38564406 -50940147 + FRAM SINE Alu 1 166 0 340 160 154 138 chr17 38564408 38564562 -50939991 + L1MC4 LINE L1 7894 8041 -1 222 213 16 49 chr17 38564590 38564651 -50939902 + MIR3 SINE MIR 120 178 -30 2093 102 4 0 chr17 38564720 38564995 -50939558 + AluSx SINE Alu 1 276 -36 2052 124 0 23 chr17 38565231 38565530 -50939023 + AluSx SINE Alu 1 292 -20 404 291 58 69 chr17 38565768 38565957 -50938596 + MIR SINE MIR 60 246 -16 1350 167 47 8 chr17 38566485 38566742 -50937811 + AluJo SINE Alu 1 267 -45 463 149 191 0 chr17 38566747 38566841 -50937712 - AluSg/x SINE Alu -9 300 189 187 298 161 37 chr17 38567281 38567442 -50937111 - MIR SINE MIR 0 262 82 2073 114 7 0 chr17 38567477 38567776 -50936777 + AluSp SINE Alu 1 301 -12 2055 103 17 0 chr17 38567841 38568133 -50936420 + AluSq SINE Alu 1 297 -16 1543 87 104 0 chr17 38568139 38568369 -50936184 + AluSx SINE Alu 1 254 -58 23 33 0 0 chr17 38568896 38568926 -50935627 + GC_rich Low_complexity Low_complexity 1 30 0 31 92 0 0 chr17 38569137 38569224 -50935329 + GC_rich Low_complexity Low_complexity 1 87 0 666 275 93 12 chr17 38569804 38570011 -50934542 - MIR SINE MIR -2 260 40 347 229 73 72 chr17 38570125 38570175 -50934378 - L1ME4a LINE L1 -25 6056 6008 1989 96 7 3 chr17 38570175 38570481 -50934072 + AluSq SINE Alu 2 308 0 347 229 73 72 chr17 38570481 38570585 -50933968 - L1ME4a LINE L1 -73 6008 1175 1163 262 132 34 chr17 38570602 38571148 -50933405 - L2 LINE L2 -4 3309 2690 2264 88 3 10 chr17 38571148 38571455 -50933098 + AluSq SINE Alu 1 305 -8 1163 262 132 34 chr17 38571455 38571489 -50933064 - L2 LINE L2 -623 2690 2661 730 164 16 8 chr17 38571509 38571631 -50932922 + FLAM_A SINE Alu 1 123 -10 1817 146 20 0 chr17 38571953 38572248 -50932305 + AluSx SINE Alu 1 301 -11 1680 175 0 19 chr17 38572348 38572657 -50931896 + AluJb SINE Alu 1 303 -9 241 302 233 6 chr17 38572729 38572901 -50931652 - L2 LINE L2 -863 2451 2241 2379 68 0 0 chr17 38573054 38573349 -50931204 + AluY SINE Alu 1 295 -16 479 218 23 23 chr17 38573430 38573563 -50930990 - MER94 DNA DNA 0 134 2 235 186 29 57 chr17 38573712 38573782 -50930771 + L2 LINE L2 3014 3081 -191 21 0 0 0 chr17 38573902 38573923 -50930630 + AT_rich Low_complexity Low_complexity 1 21 0 1623 192 3 3 chr17 38574166 38574463 -50930090 + AluJb SINE Alu 1 297 -15 5303 124 30 46 chr17 38574464 38574571 -50929982 + L1MA8 LINE L1 5194 5301 -990 2001 85 11 0 chr17 38574571 38574842 -50929711 + AluSq SINE Alu 40 313 0 5303 124 30 46 chr17 38574842 38575263 -50929290 + L1MA8 LINE L1 5301 5727 -564 264 30 0 0 chr17 38575263 38575296 -50929257 + (CA)n Simple_repeat Simple_repeat 2 34 0 5303 124 30 46 chr17 38575296 38575601 -50928952 + L1MA8 LINE L1 5727 6084 -207 2233 113 0 0 chr17 38575601 38575912 -50928641 + AluSx SINE Alu 1 311 -1 5303 124 30 46 chr17 38575912 38576106 -50928447 + L1MA8 LINE L1 6084 6279 -12 26 64 0 0 chr17 38576129 38576176 -50928377 + AT_rich Low_complexity Low_complexity 1 47 0 373 288 62 50 chr17 38576672 38576740 -50927813 + MIR SINE MIR 23 89 -173 2204 101 0 3 chr17 38576740 38577038 -50927515 + AluSq SINE Alu 1 297 -16 373 288 62 50 chr17 38577038 38577129 -50927424 + MIR SINE MIR 89 184 -78 1815 150 0 7 chr17 38577137 38577430 -50927123 + AluSx SINE Alu 1 291 -21 270 278 8 75 chr17 38578201 38578334 -50926219 - MIR SINE MIR -38 224 101 1683 113 0 12 chr17 38578695 38578943 -50925610 - AluSq SINE Alu -19 294 50 2120 105 0 0 chr17 38579171 38579466 -50925087 - AluSg SINE Alu -15 295 1 347 227 13 0 chr17 38579582 38579657 -50924896 + MIR SINE MIR 30 105 -157 293 325 62 53 chr17 38579684 38579707 -50924846 - L2 LINE L2 -458 2856 2835 2103 111 14 0 chr17 38579707 38579996 -50924557 + AluSx SINE Alu 1 293 -19 293 325 62 53 chr17 38579996 38580181 -50924372 - L2 LINE L2 -479 2835 2646 3094 61 3 3 chr17 38581090 38581482 -50923071 + L1PA6 LINE L1 5751 6142 -12 2179 113 3 0 chr17 38582022 38582324 -50922229 - AluSx SINE Alu -9 303 1 1017 126 0 0 chr17 38582432 38582583 -50921970 + AluSg/x SINE Alu 158 308 -2 1698 118 99 0 chr17 38582951 38583223 -50921330 - AluSx SINE Alu -13 299 1 201 346 52 47 chr17 38583371 38583582 -50920971 - MIR SINE MIR -48 214 3 2269 90 3 6 chr17 38583612 38583923 -50920630 - AluSq SINE Alu -3 310 1 472 333 13 0 chr17 38585365 38585518 -50919035 + MIR SINE MIR 51 205 -57 2020 104 7 3 chr17 38585537 38585825 -50918728 - AluSg SINE Alu -21 289 1 929 162 0 0 chr17 38585975 38586129 -50918424 - FRAM SINE Alu -14 162 9 2188 106 0 3 chr17 38586135 38586437 -50918116 - AluSc SINE Alu -8 301 1 356 278 56 28 chr17 38586448 38586592 -50917961 - L1MCa LINE L1 -4361 2065 1918 * 427 246 8 54 chr17 38586513 38586643 -50917910 + L1MCa LINE L1 1941 2064 -4362 694 147 0 59 chr17 38586646 38586782 -50917771 - FLAM_C SINE Alu -5 128 1 2111 107 33 0 chr17 38587071 38587371 -50917182 - AluSx SINE Alu -2 310 1 470 304 164 0 chr17 38587713 38587927 -50916626 - MIR SINE MIR -12 250 2 1338 188 7 18 chr17 38588629 38588905 -50915648 - AluJb SINE Alu -39 273 1 2100 123 3 0 chr17 38589040 38589341 -50915212 + AluSx SINE Alu 1 302 -10 2048 122 0 0 chr17 38589368 38589656 -50914897 + AluSg SINE Alu 1 288 -22 1890 149 13 0 chr17 38589669 38589971 -50914582 + AluJb SINE Alu 1 306 -6 2004 131 0 0 chr17 38590178 38590476 -50914077 - AluSx SINE Alu -14 298 1 22 0 0 0 chr17 38590485 38590507 -50914046 + AT_rich Low_complexity Low_complexity 1 22 0 2026 135 0 3 chr17 38591300 38591596 -50912957 - AluSx SINE Alu -17 295 1 608 253 69 6 chr17 38591602 38591776 -50912777 - L2 LINE L2 -607 2707 2523 313 223 9 107 chr17 38592181 38592293 -50912260 + MIR SINE MIR 88 188 -74 1280 84 0 0 chr17 38592635 38592802 -50911751 - AluSg SINE Alu -143 167 1 1728 138 17 27 chr17 38592935 38593231 -50911322 + AluSx SINE Alu 1 293 -19 1132 127 0 0 chr17 38593735 38593901 -50910652 - AluSg/x SINE Alu -16 294 129 195 42 0 0 chr17 38593901 38593925 -50910628 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2151 96 0 0 chr17 38593925 38594205 -50910348 - AluSc SINE Alu -28 281 2 244 261 0 29 chr17 38594413 38594482 -50910071 + GA-rich Low_complexity Low_complexity 2 68 0 381 250 183 8 chr17 38594515 38594635 -50909918 + L1MC4a LINE L1 5504 5644 -2164 632 184 7 174 chr17 38594758 38594859 -50909694 + L1MC4a LINE L1 5681 5797 -2011 2382 73 0 0 chr17 38594859 38595159 -50909394 + AluY SINE Alu 1 300 -11 632 184 7 174 chr17 38595159 38595300 -50909253 + L1MC4a LINE L1 5797 5870 -1938 1920 142 0 0 chr17 38595300 38595639 -50908914 + AluSx SINE Alu 1 339 0 632 184 7 174 chr17 38595639 38595687 -50908866 + L1MC4a LINE L1 5870 5924 -1884 331 224 56 93 chr17 38595725 38595886 -50908667 + HAL1 LINE L1 2353 2507 0 2014 125 7 0 chr17 38595890 38596195 -50908358 + AluSx SINE Alu 1 307 -5 266 200 21 14 chr17 38596243 38596324 -50908229 - MIR3 SINE MIR -7 201 89 7493 18 0 0 chr17 38596347 38597192 -50907361 - L1PA3 LINE L1 0 6155 5311 916 26 0 8 chr17 38597187 38597304 -50907249 + L1PA3 LINE L1 5214 5329 -817 * 1774 147 3 34 chr17 38597686 38598006 -50906547 - AluJo SINE Alu -2 310 1 313 119 0 0 chr17 38598014 38598056 -50906497 - AluSp/q SINE Alu -30 273 232 1972 129 0 0 chr17 38598076 38598355 -50906198 - AluSq SINE Alu -34 279 1 1979 117 0 3 chr17 38599080 38599409 -50905144 - AluSx SINE Alu 0 328 1 2050 131 3 6 chr17 38599800 38600113 -50904440 - AluSx SINE Alu 0 312 1 201 394 32 21 chr17 38600421 38600515 -50904038 + L3b LINE CR1 1442 1536 -47 456 283 77 73 chr17 38601145 38601289 -50903264 + MIR3 SINE MIR 15 157 -104 2184 92 0 3 chr17 38601289 38601581 -50902972 - AluY SINE Alu -20 291 1 2001 117 7 0 chr17 38601581 38601872 -50902681 - AluSx SINE Alu -19 293 1 456 283 77 73 chr17 38601872 38601931 -50902622 + MIR3 SINE MIR 156 219 -42 2480 74 0 0 chr17 38602199 38602510 -50902043 + AluSp SINE Alu 1 311 -2 800 176 0 0 chr17 38602582 38602707 -50901846 - FLAM_C SINE Alu -16 127 3 245 250 0 44 chr17 38602709 38602777 -50901776 - L2 LINE L2 -1519 1795 1731 1778 159 7 0 chr17 38603240 38603529 -50901024 + AluSx SINE Alu 1 291 -21 2052 97 7 27 chr17 38603607 38603907 -50900646 + AluSg SINE Alu 1 294 -16 526 303 74 6 chr17 38604153 38604328 -50900225 + MIR3 SINE MIR 5 191 -17 2462 60 0 0 chr17 38604353 38604652 -50899901 - AluY SINE Alu -12 299 1 25 0 0 0 chr17 38604706 38604731 -50899822 + AT_rich Low_complexity Low_complexity 1 25 0 610 187 9 0 chr17 38604731 38604838 -50899715 - FLAM_C SINE Alu -25 118 11 2130 112 0 3 chr17 38604854 38605167 -50899386 - AluSx SINE Alu 0 312 1 252 0 0 0 chr17 38605172 38605200 -50899353 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1315 139 0 51 chr17 38605206 38605443 -50899110 - AluSx SINE Alu -24 288 64 367 109 18 0 chr17 38605550 38605605 -50898948 - AluJ/FLAM SINE Alu -245 57 2 323 235 73 59 chr17 38605612 38605748 -50898805 - L1ME3A LINE L1 0 6170 6033 2002 106 14 0 chr17 38605844 38606137 -50898416 + AluSx SINE Alu 1 297 -15 2216 102 0 3 chr17 38606142 38606447 -50898106 + AluSx SINE Alu 1 304 -8 632 177 0 65 chr17 38606489 38606613 -50897940 - FLAM_A SINE Alu -13 129 14 1579 174 13 10 chr17 38606632 38606936 -50897617 - AluJo SINE Alu -7 305 1 1154 261 90 8 chr17 38606969 38607325 -50897228 - L1ME3A LINE L1 -287 5883 5499 2048 136 0 0 chr17 38607540 38607849 -50896704 - AluSq SINE Alu -4 309 1 926 121 0 0 chr17 38607855 38607995 -50896558 - AluSg/x SINE Alu -9 301 162 1944 121 4 7 chr17 38608060 38608361 -50896192 - AluSx SINE Alu 0 301 2 615 267 32 73 chr17 38608460 38608707 -50895846 - MIR SINE MIR -6 256 20 201 178 0 0 chr17 38608882 38608927 -50895626 + T-rich Low_complexity Low_complexity 1 45 0 1944 138 0 0 chr17 38609051 38609342 -50895211 - AluSx SINE Alu -21 291 1 2240 95 0 0 chr17 38609381 38609676 -50894877 + AluSg SINE Alu 1 295 -15 1750 137 50 0 chr17 38610889 38611167 -50893386 + AluSx SINE Alu 1 292 -20 379 98 0 0 chr17 38611535 38611596 -50892957 - Alu SINE Alu 0 300 240 180 111 0 0 chr17 38611698 38611725 -50892828 + (A)n Simple_repeat Simple_repeat 1 27 0 657 148 19 0 chr17 38611726 38611834 -50892719 + AluJo SINE Alu 120 229 -83 193 225 0 157 chr17 38611859 38611897 -50892656 - MER5A DNA MER1_type -108 81 63 2328 59 3 16 chr17 38611897 38612203 -50892350 - AluY SINE Alu -8 303 2 193 225 0 157 chr17 38612203 38612253 -50892300 - MER5A DNA MER1_type -126 63 7 185 269 39 0 chr17 38612439 38612491 -50892062 + L2 LINE L2 3169 3222 -91 2219 133 62 3 chr17 38612627 38612995 -50891558 - MLT1B LTR MaLR 0 390 1 2114 96 7 3 chr17 38613563 38613855 -50890698 + AluSc SINE Alu 6 298 -11 823 172 6 58 chr17 38614209 38614383 -50890170 - FAM SINE Alu -10 165 1 24 0 0 0 chr17 38615451 38615475 -50889078 + GC_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr17 38615578 38615607 -50888946 + GC_rich Low_complexity Low_complexity 1 29 0 2308 109 0 0 chr17 38617357 38617669 -50886884 - AluSx SINE Alu 0 312 1 2319 87 3 0 chr17 38618203 38618489 -50886064 + AluY SINE Alu 2 288 -23 1996 123 13 7 chr17 38618691 38618991 -50885562 - AluSx SINE Alu -10 302 1 2240 92 3 7 chr17 38618996 38619303 -50885250 - AluSp SINE Alu 0 306 1 2184 118 0 0 chr17 38619304 38619601 -50884952 - AluSg SINE Alu -13 297 1 2154 121 13 0 chr17 38619607 38619912 -50884641 - AluSx SINE Alu -3 309 1 1466 188 16 36 chr17 38619926 38620234 -50884319 - AluJo SINE Alu -10 302 1 1815 191 0 0 chr17 38620756 38621050 -50883503 - AluJo SINE Alu -17 295 2 2333 101 10 0 chr17 38621211 38621518 -50883035 - AluSx SINE Alu -2 310 1 1562 166 7 62 chr17 38622128 38622436 -50882117 - AluJb SINE Alu -9 303 13 2314 76 41 0 chr17 38622659 38622949 -50881604 + AluY SINE Alu 1 302 -9 729 162 0 8 chr17 38623025 38623142 -50881411 + FLAM_C SINE Alu 2 117 -26 2162 115 3 13 chr17 38623383 38623696 -50880857 - AluSx SINE Alu -2 310 1 1967 122 7 24 chr17 38623705 38624025 -50880528 - AluSx SINE Alu 0 315 1 2001 102 4 0 chr17 38624064 38624318 -50880235 - AluSp SINE Alu -58 255 1 1105 180 0 0 chr17 38624327 38624510 -50880043 - AluJb SINE Alu -1 311 129 1678 167 26 29 chr17 38624516 38624828 -50879725 - AluJo SINE Alu -1 311 1 303 271 123 0 chr17 38624867 38624989 -50879564 - L1MC3 LINE L1 -447 7338 7202 352 155 18 5 chr17 38624989 38625066 -50879487 + Alu SINE Alu 1 50 -253 2130 58 46 0 chr17 38625217 38625478 -50879075 - AluY SINE Alu -14 297 25 1768 222 97 29 chr17 38625535 38626013 -50878540 - HAL1 LINE L1 -832 1675 1148 1861 115 79 4 chr17 38626013 38626292 -50878261 - AluSx SINE Alu -12 300 1 1768 222 97 29 chr17 38626292 38626399 -50878154 - HAL1 LINE L1 -1359 1148 1050 787 144 0 50 chr17 38626422 38626561 -50877992 - FLAM_C SINE Alu -1 132 1 1226 155 21 10 chr17 38626599 38626793 -50877760 + AluJo SINE Alu 12 207 -105 2290 110 48 20 chr17 38626794 38627148 -50877405 - THE1B LTR MaLR 0 364 1 2483 77 0 0 chr17 38627148 38627458 -50877095 - THE1B-int LTR MaLR 0 1580 1271 2526 72 0 3 chr17 38627458 38627762 -50876791 - AluY SINE Alu -8 303 1 259 214 0 0 chr17 38627763 38627819 -50876734 - L1PA14 LINE L1 -122 6039 5984 1290 103 0 0 chr17 38627849 38628014 -50876539 - AluSg/x SINE Alu -14 298 134 298 101 58 29 chr17 38628014 38628083 -50876470 - L1MD3 LINE L1 -120 7875 7805 774 243 23 0 chr17 38628090 38628263 -50876290 - AluJo SINE Alu -16 296 120 1417 189 8 0 chr17 38628264 38628528 -50876025 - L1MD3 LINE L1 -205 7790 7525 1853 236 153 40 chr17 38628544 38628830 -50875723 - HAL1 LINE L1 -1542 965 713 1999 100 4 0 chr17 38628830 38629090 -50875463 + AluSg SINE Alu 1 261 -49 1853 236 153 40 chr17 38629090 38629588 -50874965 - HAL1 LINE L1 -1794 713 92 2128 121 0 0 chr17 38629590 38629905 -50874648 - AluSx SINE Alu 0 315 1 714 151 0 0 chr17 38629927 38630033 -50874520 - FLAM_C SINE Alu -36 107 2 266 169 0 84 chr17 38630040 38630123 -50874430 + T-rich Low_complexity Low_complexity 1 76 0 24 32 0 0 chr17 38630269 38630300 -50874253 + AT_rich Low_complexity Low_complexity 1 31 0 2374 104 0 0 chr17 38630398 38630696 -50873857 - AluSg1 SINE Alu -11 298 1 2366 100 0 0 chr17 38630903 38631204 -50873349 + AluSx SINE Alu 1 301 -11 1718 162 62 3 chr17 38631228 38631518 -50873035 - AluJb SINE Alu -5 307 1 317 247 0 43 chr17 38631655 38631748 -50872805 + L1MC4 LINE L1 6615 6703 -1339 2066 132 7 0 chr17 38631753 38632063 -50872490 - AluSx SINE Alu 0 312 1 2271 114 3 0 chr17 38632484 38632781 -50871772 - AluSx SINE Alu -14 298 1 456 307 129 0 chr17 38632781 38633006 -50871547 + MER112 DNA MER1_type 6 259 -1 878 178 18 6 chr17 38633105 38633268 -50871285 - FAM SINE Alu -13 172 8 451 262 47 52 chr17 38633620 38633792 -50870761 - MER5B DNA MER1_type -1 177 7 242 271 0 17 chr17 38635157 38635216 -50869337 + CT-rich Low_complexity Low_complexity 5 62 0 2184 103 13 19 chr17 38635223 38635534 -50869019 - AluSx SINE Alu -3 309 1 240 75 0 0 chr17 38635562 38635602 -50868951 - AluSx SINE Alu 0 300 261 1705 84 14 5 chr17 38635602 38635815 -50868738 - AluSx SINE Alu -97 215 1 401 93 0 0 chr17 38635815 38635869 -50868684 - AluSp SINE Alu -184 129 76 553 41 27 0 chr17 38635944 38636017 -50868536 - AluSc SINE Alu -11 298 224 2337 78 0 0 chr17 38636033 38636372 -50868181 - AluY SINE Alu 0 339 1 1810 172 3 0 chr17 38636435 38636725 -50867828 + AluJo SINE Alu 1 291 -21 1359 143 22 36 chr17 38636745 38636969 -50867584 - AluJo SINE Alu -8 304 84 663 179 46 33 chr17 38637049 38637200 -50867353 - MER5A DNA MER1_type -34 155 3 2701 61 0 0 chr17 38637501 38637827 -50866726 - LTR17 LTR ERV1 -454 326 1 28735 45 7 6 chr17 38637827 38641229 -50863324 - HERV17 LTR ERV1 0 8626 5220 2298 97 7 3 chr17 38641249 38641549 -50863004 - AluSx SINE Alu -11 301 1 797 176 0 0 chr17 38641555 38641686 -50862867 - FLAM_C SINE Alu 0 133 3 28 0 0 0 chr17 38641842 38641870 -50862683 + AT_rich Low_complexity Low_complexity 1 28 0 633 75 11 11 chr17 38641946 38642040 -50862513 - L1PA7 LINE L1 0 6154 6061 25 0 0 0 chr17 38642263 38642288 -50862265 + AT_rich Low_complexity Low_complexity 1 25 0 1822 149 3 50 chr17 38642335 38642471 -50862082 + AluJo SINE Alu 1 142 -170 2291 115 0 0 chr17 38642471 38642767 -50861786 + AluSg1 SINE Alu 1 296 -13 2161 77 33 0 chr17 38642769 38643088 -50861465 + AluY SINE Alu 1 328 0 1822 149 3 50 chr17 38643088 38643268 -50861285 + AluJo SINE Alu 143 306 -6 2347 104 0 3 chr17 38644205 38644513 -50860040 - AluSg SINE Alu -3 307 1 1989 167 0 3 chr17 38644515 38644815 -50859738 - AluSx SINE Alu -13 299 1 397 253 99 43 chr17 38645209 38645371 -50859182 - MER5B DNA MER1_type 0 178 8 180 0 0 0 chr17 38645722 38645742 -50858811 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 828 118 0 8 chr17 38645769 38645888 -50858665 - FLAM_C SINE Alu -15 118 1 297 277 106 0 chr17 38645899 38645993 -50858560 - MIR SINE MIR -67 141 38 337 303 108 32 chr17 38646223 38646408 -50858145 + MER20 DNA MER1_type 16 214 -5 259 270 112 11 chr17 38646906 38646995 -50857558 + MIR3 SINE MIR 67 164 -44 2342 103 7 0 chr17 38647317 38647627 -50856926 - AluSx SINE Alu 0 312 1 2202 92 18 0 chr17 38647627 38647909 -50856644 - AluSp SINE Alu -13 300 14 2041 142 7 3 chr17 38647948 38648250 -50856303 - AluSx SINE Alu -9 303 1 840 158 0 43 chr17 38648517 38648656 -50855897 + FLAM_C SINE Alu 1 133 0 180 111 0 0 chr17 38649591 38649618 -50854935 + (A)n Simple_repeat Simple_repeat 1 27 0 1148 92 0 92 chr17 38649802 38649967 -50854586 - AluSq SINE Alu -15 298 152 2322 81 7 0 chr17 38649967 38650262 -50854291 - AluSg SINE Alu -13 297 1 1148 92 0 92 chr17 38650262 38650291 -50854262 - AluSq SINE Alu -161 152 122 2125 77 0 61 chr17 38650318 38650499 -50854054 - AluSq SINE Alu -3 310 119 2345 80 3 17 chr17 38650499 38650801 -50853752 - AluSp SINE Alu -15 298 1 2266 97 3 0 chr17 38650811 38651100 -50853453 - AluSp SINE Alu -23 290 1 2125 77 0 61 chr17 38651100 38651217 -50853336 - AluSq SINE Alu -203 110 20 1627 179 31 7 chr17 38651579 38651870 -50852683 - AluJo SINE Alu -12 300 3 3491 196 26 55 chr17 38651889 38652740 -50851813 - LTR1B LTR ERV1 0 826 1 2227 65 29 59 chr17 38653225 38653405 -50851148 - AluSg SINE Alu -13 297 128 2414 77 3 6 chr17 38653405 38653717 -50850836 - AluY SINE Alu 0 311 1 2227 65 29 59 chr17 38653717 38653842 -50850711 - AluSg SINE Alu -182 128 1 487 220 143 82 chr17 38654089 38654216 -50850337 - MIR SINE MIR 0 262 144 2345 112 0 0 chr17 38654216 38654520 -50850033 - AluSx SINE Alu -8 304 1 487 220 143 82 chr17 38654520 38654637 -50849916 - MIR SINE MIR -118 144 3 2269 95 3 3 chr17 38654662 38654956 -50849597 - AluSx SINE Alu -18 294 1 1748 152 24 17 chr17 38655051 38655208 -50849345 - AluJo SINE Alu -21 291 137 207 0 0 0 chr17 38655208 38655231 -50849322 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2191 102 0 3 chr17 38655231 38655514 -50849039 - AluSg1 SINE Alu -27 282 1 1748 152 24 17 chr17 38655514 38655644 -50848909 - AluJo SINE Alu -174 138 1 349 209 77 0 chr17 38655772 38655863 -50848690 - L1ME4a LINE L1 -152 5969 5872 2192 110 7 16 chr17 38656644 38656953 -50847600 + AluSx SINE Alu 1 306 -6 305 254 81 42 chr17 38657560 38657612 -50846941 - L1ME4a LINE L1 -11 6110 6061 1735 121 94 0 chr17 38657612 38657877 -50846676 - AluSg SINE Alu -20 290 1 305 254 81 42 chr17 38657877 38658084 -50846469 - L1ME4a LINE L1 -60 6061 5841 2044 129 14 3 chr17 38658091 38658386 -50846167 - AluJb SINE Alu -14 298 1 1615 127 4 0 chr17 38658386 38658623 -50845930 - L1M1 LINE L1 -562 5738 5501 303 28 0 0 chr17 38658839 38658875 -50845678 + (TG)n Simple_repeat Simple_repeat 2 37 0 3381 221 53 14 chr17 38659042 38659799 -50844754 + MER21B LTR ERV1 1 786 -77 2590 65 3 0 chr17 38659916 38660222 -50844331 + AluSp SINE Alu 1 307 -6 2125 134 0 10 chr17 38660230 38660537 -50844016 + AluSx SINE Alu 1 304 -8 314 339 20 0 chr17 38660538 38660659 -50843894 + MER5A DNA MER1_type 59 177 -1 263 157 20 0 chr17 38660664 38660715 -50843838 + MIR SINE MIR 206 257 -5 2499 67 10 0 chr17 38660773 38661070 -50843483 + AluY SINE Alu 1 300 -11 3492 91 5 89 chr17 38661108 38661736 -50842817 - L1MA3 LINE L1 -477 5828 5254 1133 82 58 18 chr17 38661855 38662026 -50842527 - L1PA11 LINE L1 0 6174 5997 829 167 0 0 chr17 38662300 38662426 -50842127 - FLAM_C SINE Alu -6 127 2 467 244 111 29 chr17 38662622 38662794 -50841759 - MIR SINE MIR -12 250 65 746 181 8 16 chr17 38663071 38663198 -50841355 - FLAM_C SINE Alu -3 130 5 1325 119 0 0 chr17 38663273 38663450 -50841103 - AluSg/x SINE Alu -3 307 131 237 108 0 0 chr17 38663721 38663758 -50840795 + (TG)n Simple_repeat Simple_repeat 2 38 0 1316 297 134 32 chr17 38663866 38664349 -50840204 + L2 LINE L2 1670 2102 -1212 2248 115 3 3 chr17 38664349 38664661 -50839892 - AluSx SINE Alu 0 312 1 1316 297 134 32 chr17 38664661 38665078 -50839475 + L2 LINE L2 2102 2662 -652 1570 178 56 3 chr17 38665116 38665403 -50839150 - AluJo SINE Alu -10 302 1 411 287 161 40 chr17 38665442 38665847 -50838706 + L2 LINE L2 2833 3301 -12 1626 181 22 35 chr17 38665847 38666161 -50838392 + AluJo SINE Alu 1 310 -2 411 287 161 40 chr17 38666161 38666176 -50838377 + L2 LINE L2 3301 3313 0 1765 144 4 0 chr17 38666267 38666517 -50838036 - AluSx SINE Alu -61 251 1 638 256 74 7 chr17 38666545 38666830 -50837723 - L1M4 LINE L1 -2659 3487 3184 913 212 99 0 chr17 38666876 38667178 -50837375 - L1M4 LINE L1 -3170 2976 2645 1748 167 28 11 chr17 38667284 38667597 -50836956 + AluSx SINE Alu 1 312 0 1634 236 75 8 chr17 38667603 38668120 -50836433 + L1ME3 LINE L1 5307 5858 -312 2014 126 7 10 chr17 38668174 38668468 -50836085 + AluSx SINE Alu 1 293 -19 880 243 22 29 chr17 38668473 38668786 -50835767 + L1ME3 LINE L1 5851 6161 -1 356 267 27 63 chr17 38668804 38668962 -50835591 + L1M4b LINE L1 11 173 -6682 2590 61 0 0 chr17 38668962 38669273 -50835280 + AluY SINE Alu 1 311 0 356 267 27 63 chr17 38669273 38669395 -50835158 + L1M4b LINE L1 173 548 -6307 725 220 26 137 chr17 38669809 38670195 -50834358 + L1M4b LINE L1 1207 1549 -5310 825 164 16 0 chr17 38670222 38670350 -50834203 - AluJb SINE Alu -178 134 5 2333 62 21 0 chr17 38670364 38670655 -50833898 - AluSp SINE Alu -16 297 1 1131 178 182 16 chr17 38670712 38670970 -50833583 + AluJo SINE Alu 2 302 0 3491 154 22 110 chr17 38671023 38671298 -50833255 + L1MB8 LINE L1 5351 5649 -529 2298 99 0 0 chr17 38671298 38671592 -50832961 - AluSx SINE Alu -18 294 1 3491 154 22 110 chr17 38671592 38672074 -50832479 + L1MB8 LINE L1 5649 6017 -161 814 129 8 16 chr17 38672074 38672198 -50832355 + FLAM_A SINE Alu 1 123 -10 3491 154 22 110 chr17 38672198 38672347 -50832206 + L1MB8 LINE L1 6017 6178 0 1603 233 18 100 chr17 38672332 38672575 -50831978 + L1M4 LINE L1 4257 4518 -1628 * 499 145 36 0 chr17 38672575 38672658 -50831895 + AluSx SINE Alu 1 86 -226 2429 68 0 23 chr17 38672658 38672965 -50831588 + AluSq SINE Alu 1 300 -13 1565 114 21 13 chr17 38672963 38673200 -50831353 + AluSx SINE Alu 71 309 -1 1603 233 18 100 chr17 38672965 38673581 -50830972 + L1M4 LINE L1 4516 4871 -1275 1528 158 24 20 chr17 38676514 38676761 -50827792 - AluJo SINE Alu -63 249 2 816 193 13 0 chr17 38677046 38677196 -50827357 + FRAM SINE Alu 1 152 -14 341 235 0 9 chr17 38677269 38677314 -50827239 + (TA)n Simple_repeat Simple_repeat 1 45 -69 2102 109 0 36 chr17 38677314 38677617 -50826936 + AluSq SINE Alu 1 292 -21 341 235 0 9 chr17 38677617 38677686 -50826867 + (TA)n Simple_repeat Simple_repeat 45 114 0 2364 93 3 0 chr17 38677707 38678008 -50826545 - AluSp SINE Alu -11 302 1 2039 131 0 0 chr17 38678151 38678434 -50826119 + AluSx SINE Alu 1 283 -29 864 144 40 46 chr17 38678442 38678563 -50825990 + MLT1A1 LTR MaLR 29 150 -215 2476 69 0 0 chr17 38678563 38678866 -50825687 + AluY SINE Alu 1 303 -8 864 144 40 46 chr17 38678866 38678917 -50825636 + MLT1A1 LTR MaLR 150 200 -165 1279 150 21 91 chr17 38678921 38679207 -50825346 + MER51B LTR ERV1 5 270 -107 2267 98 0 16 chr17 38679209 38679525 -50825028 - AluY SINE Alu 0 311 1 960 140 0 0 chr17 38679525 38679661 -50824892 - AluSq/x SINE Alu -177 136 1 786 105 0 8 chr17 38679661 38679785 -50824768 + MER51A LTR ERV1 512 634 0 1048 90 34 40 chr17 38679785 38679962 -50824591 + MER51A-int LTR ERV1 1 176 -7640 3151 153 10 17 chr17 38679976 38680553 -50824000 + MER51A-int LTR ERV1 418 990 -6826 * 7971 112 10 26 chr17 38680540 38681328 -50823225 + MER51A-int LTR ERV1 1093 1892 -5924 2152 123 10 0 chr17 38681328 38681628 -50822925 + AluSx SINE Alu 1 303 -9 7971 112 10 26 chr17 38681628 38682291 -50822262 + MER51A-int LTR ERV1 1892 2522 -5294 1954 142 0 26 chr17 38682291 38682594 -50821959 - AluSx SINE Alu -17 295 1 1097 94 62 168 chr17 38683566 38683692 -50820861 - MER30 DNA MER1_type -1 229 91 2397 82 3 3 chr17 38683692 38683995 -50820558 + AluSp SINE Alu 1 303 -10 258 32 0 0 chr17 38684005 38684036 -50820517 + (TG)n Simple_repeat Simple_repeat 2 32 0 1097 94 62 168 chr17 38684036 38684066 -50820487 - MER30 DNA MER1_type -148 82 50 2277 106 3 3 chr17 38684066 38684369 -50820184 - AluSc SINE Alu -3 306 4 1097 94 62 168 chr17 38684369 38684456 -50820097 - MER30 DNA MER1_type -180 50 1 679 255 115 17 chr17 38684534 38684769 -50819784 + MIR SINE MIR 2 259 -3 2092 137 0 3 chr17 38684825 38685117 -50819436 + AluSx SINE Alu 1 291 -21 286 249 18 203 chr17 38685119 38685445 -50819108 - L2 LINE L2 -14 3258 2993 2368 98 3 0 chr17 38685887 38686192 -50818361 - AluSx SINE Alu -5 307 2 239 143 0 0 chr17 38686220 38686262 -50818291 - L1ME1 LINE L1 -5 6161 6120 1712 170 3 3 chr17 38686276 38686558 -50817995 - AluJo SINE Alu -30 282 1 899 229 124 8 chr17 38686558 38686825 -50817728 - L1ME1 LINE L1 -33 6133 5836 27 62 0 0 chr17 38686905 38686953 -50817600 + AT_rich Low_complexity Low_complexity 1 48 0 253 244 35 12 chr17 38687085 38687171 -50817382 + MIR SINE MIR 41 128 -80 2148 112 0 37 chr17 38687404 38687726 -50816827 - AluSx SINE Alu -2 310 1 535 269 216 36 chr17 38688110 38688782 -50815771 - LTR50 LTR ERVL -2 793 1 326 259 80 27 chr17 38688787 38688899 -50815654 - MIR SINE MIR -111 151 34 494 175 44 88 chr17 38688903 38688986 -50815567 - MER104 DNA Tc2 -1719 179 103 2101 122 7 0 chr17 38688986 38689282 -50815271 + AluSx SINE Alu 1 298 -14 494 175 44 88 chr17 38689282 38689335 -50815218 - MER104 DNA Tc2 -1795 103 49 1562 188 3 58 chr17 38689335 38689644 -50814909 - AluJb SINE Alu -20 292 1 351 336 21 21 chr17 38689723 38689866 -50814687 - L2 LINE L2 -952 2362 2220 826 141 16 8 chr17 38690594 38690722 -50813831 + FRAM SINE Alu 26 154 -22 2643 142 19 12 chr17 38692722 38693145 -50811408 - MSTB LTR MaLR 0 426 1 191 337 36 0 chr17 38693177 38693260 -50811293 + MIR SINE MIR 104 189 -73 2265 114 0 0 chr17 38693292 38693590 -50810963 - AluSc SINE Alu -11 298 1 315 256 84 110 chr17 38693747 38693817 -50810736 - L2 LINE L2 -167 3105 3035 2130 133 7 0 chr17 38693817 38694125 -50810428 + AluSx SINE Alu 1 310 -2 315 256 84 110 chr17 38694125 38694245 -50810308 - L2 LINE L2 -237 3035 2920 360 0 0 0 chr17 38694413 38694453 -50810100 + (TG)n Simple_repeat Simple_repeat 2 41 0 385 224 79 33 chr17 38694454 38694606 -50809947 - L1MC5 LINE L1 -58 7903 7745 1936 172 7 0 chr17 38694677 38694985 -50809568 + AluJb SINE Alu 1 310 -2 24 67 0 0 chr17 38695286 38695331 -50809222 + AT_rich Low_complexity Low_complexity 1 45 0 1069 91 0 0 chr17 38695379 38695522 -50809031 - AluSg/x SINE Alu -36 276 134 2041 84 13 58 chr17 38695522 38695831 -50808722 - AluSc SINE Alu -14 295 1 995 73 0 48 chr17 38696025 38696182 -50808371 - L1PA8A LINE L1 -657 5474 5324 911 86 0 0 chr17 38696182 38696297 -50808256 + L1PA10 LINE L1 6033 6149 -19 22 35 0 0 chr17 38696317 38696346 -50808207 + AT_rich Low_complexity Low_complexity 1 29 0 279 218 274 24 chr17 38696404 38696528 -50808025 + MIR SINE MIR 88 242 -20 2356 91 0 3 chr17 38699660 38699967 -50804586 - AluSg1 SINE Alu -2 307 2 262 119 0 0 chr17 38701133 38701175 -50803378 + U5 snRNA snRNA 1 42 -74 1937 151 3 0 chr17 38702824 38703122 -50801431 - AluSx SINE Alu -13 299 1 2023 141 0 7 chr17 38703205 38703496 -50801057 - AluSx SINE Alu -23 289 1 2514 71 3 0 chr17 38703639 38703948 -50800605 - AluSp SINE Alu -1 312 3 378 169 0 36 chr17 38704064 38704147 -50800406 + MER116 DNA Mariner 1 80 0 22 0 0 0 chr17 38704520 38704542 -50800011 + AT_rich Low_complexity Low_complexity 1 22 0 1991 156 22 22 chr17 38705510 38705876 -50798677 + MER47A DNA MER2_type 1 366 0 641 246 0 0 chr17 38705910 38706036 -50798517 + FLAM_C SINE Alu 1 126 -17 338 297 128 65 chr17 38706352 38706417 -50798136 + L1MEd LINE L1 18 77 -6042 372 104 0 0 chr17 38706417 38706484 -50798069 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 338 297 128 65 chr17 38706484 38706785 -50797768 + L1MEd LINE L1 77 407 -5712 243 261 138 15 chr17 38706997 38707192 -50797361 + L1MEd LINE L1 730 948 -5171 1734 137 0 0 chr17 38707195 38707436 -50797117 + AluSg/x SINE Alu 69 309 -1 630 175 0 0 chr17 38707501 38707598 -50796955 + FRAM SINE Alu 41 137 -39 554 235 55 51 chr17 38707719 38708098 -50796455 + MLT1H LTR MaLR 206 549 0 2244 116 0 0 chr17 38708752 38709054 -50795499 - AluSx SINE Alu -10 302 1 219 69 0 0 chr17 38709451 38709480 -50795073 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 469 287 53 62 chr17 38709526 38709867 -50794686 + MLT1H-int LTR MaLR 1033 1370 -1 1438 209 100 60 chr17 38709870 38710382 -50794171 + MLT1H LTR MaLR 3 534 -15 507 270 58 109 chr17 38710390 38710875 -50793678 + L1MEd LINE L1 1056 1556 -4614 1991 169 0 0 chr17 38712156 38712463 -50792090 + AluJb SINE Alu 1 307 -5 233 188 29 58 chr17 38712464 38712533 -50792020 - MLT1J LTR MaLR -50 461 395 993 220 0 0 chr17 38712551 38712737 -50791816 + MER58A DNA MER1_type 39 224 0 609 307 49 22 chr17 38712781 38713048 -50791505 - MLT1J LTR MaLR -237 274 1 335 235 39 89 chr17 38714239 38714418 -50790135 - MLT1J LTR MaLR 0 511 342 252 86 0 0 chr17 38714418 38714453 -50790100 + (TTTTC)n Simple_repeat Simple_repeat 4 38 0 2334 112 0 13 chr17 38714582 38714895 -50789658 + AluSx SINE Alu 1 309 -3 306 0 0 0 chr17 38714895 38714929 -50789624 + (TA)n Simple_repeat Simple_repeat 2 35 0 2263 106 0 7 chr17 38714997 38715298 -50789255 + AluSx SINE Alu 1 299 -13 474 124 56 0 chr17 38717845 38717934 -50786619 - L1MA8 LINE L1 -127 6164 6071 23 0 0 0 chr17 38717942 38717965 -50786588 + AT_rich Low_complexity Low_complexity 1 23 0 22 43 0 21 chr17 38718431 38718447 -50786106 + AT_rich Low_complexity Low_complexity 1 16 -30 1598 172 56 0 chr17 38718447 38718714 -50785839 - AluJo SINE Alu -30 282 1 22 43 0 21 chr17 38718714 38718744 -50785809 + AT_rich Low_complexity Low_complexity 16 46 0 616 300 39 39 chr17 38718926 38719134 -50785419 + MER102b DNA MER1_type 2 213 -1215 2174 107 0 0 chr17 38719134 38719450 -50785103 + AluSq SINE Alu 3 318 0 616 300 39 39 chr17 38719450 38719570 -50784983 + MER102b DNA MER1_type 212 331 -10 307 189 278 0 chr17 38719906 38719996 -50784557 + L2 LINE L2 3195 3309 -4 1342 97 0 38 chr17 38720060 38720246 -50784307 - AluSg/x SINE Alu -12 298 120 1124 115 6 0 chr17 38720321 38720477 -50784076 - AluSq SINE Alu -156 157 1 565 273 90 100 chr17 38720482 38720782 -50783771 - L2 LINE L2 0 3272 2976 303 187 53 0 chr17 38721353 38721428 -50783125 + L1ME2 LINE L1 6085 6166 0 2457 70 0 13 chr17 38721756 38722069 -50782484 - AluY SINE Alu -2 309 1 2414 77 0 6 chr17 38724124 38724435 -50780118 - AluY SINE Alu -2 309 1 2199 108 0 0 chr17 38724533 38724821 -50779732 - AluSc SINE Alu -21 288 1 249 284 91 51 chr17 38724827 38725020 -50779533 - L1MC4a LINE L1 -1639 6169 5958 2333 121 8 30 chr17 38725020 38725392 -50779161 - THE1B LTR MaLR 0 364 1 249 284 91 51 chr17 38725392 38725494 -50779059 - L1MC4a LINE L1 -1850 5958 5862 4176 168 14 1 chr17 38725548 38726330 -50778223 + L1MB2 LINE L1 5380 6171 0 257 228 0 0 chr17 38726382 38726439 -50778114 - L1MC4a LINE L1 -2059 5749 5693 2181 115 3 0 chr17 38727511 38727807 -50776746 + AluSp SINE Alu 1 297 -16 286 184 58 46 chr17 38727834 38727921 -50776632 + MIR SINE MIR 173 260 -2 332 307 118 0 chr17 38727966 38728093 -50776460 - L1MC/D LINE L1 -1988 5820 5679 1536 175 6 60 chr17 38728445 38728760 -50775793 + AluJo SINE Alu 1 298 -14 564 326 72 48 chr17 38729004 38729630 -50774923 - L2 LINE L2 -183 3089 2439 2067 126 0 17 chr17 38730797 38731099 -50773454 - AluSg SINE Alu -13 297 1 768 161 0 8 chr17 38731178 38731302 -50773251 + AluJo SINE Alu 13 135 -177 986 208 127 9 chr17 38731343 38731555 -50772998 - MER8 DNA MER2_type -1 238 2 2078 93 11 0 chr17 38732143 38732423 -50772130 - AluSc SINE Alu -26 283 1 207 0 0 0 chr17 38732424 38732447 -50772106 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1722 171 0 11 chr17 38732447 38732734 -50771819 - AluJo SINE Alu -28 284 1 21 0 0 0 chr17 38733446 38733467 -50771086 + AT_rich Low_complexity Low_complexity 1 21 0 1874 159 0 7 chr17 38733467 38733757 -50770796 - AluJb SINE Alu -24 288 1 258 125 0 0 chr17 38733887 38733935 -50770618 - MADE1 DNA Mariner 0 80 33 264 30 0 0 chr17 38733950 38733983 -50770570 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1767 180 0 7 chr17 38733985 38734269 -50770284 - AluJb SINE Alu -30 282 1 2636 269 61 45 chr17 38735374 38736051 -50768502 + L1ME3A LINE L1 3712 4377 -1793 1796 181 3 7 chr17 38736051 38736338 -50768215 + AluJo SINE Alu 1 286 -26 2636 269 61 45 chr17 38736338 38737140 -50767413 + L1ME3A LINE L1 4377 5165 -1005 1727 152 4 4 chr17 38737140 38737410 -50767143 + AluJo SINE Alu 21 290 -22 2636 269 61 45 chr17 38737410 38738098 -50766455 + L1ME3A LINE L1 5165 5956 -214 2053 145 0 19 chr17 38738320 38738638 -50765915 - AluSx SINE Alu 0 312 1 221 226 38 19 chr17 38739600 38739653 -50764900 - L3 LINE CR1 -1 1576 1523 598 227 0 111 chr17 38739765 38739937 -50764616 - MIR3 SINE MIR -55 153 1 308 75 0 38 chr17 38742263 38742316 -50762237 + (GGA)n Simple_repeat Simple_repeat 1 51 0 215 139 28 0 chr17 38742659 38742695 -50761858 + CT-rich Low_complexity Low_complexity 1 37 0 739 163 0 57 chr17 38743948 38744089 -50760464 - FLAM_C SINE Alu 0 133 1 2275 91 3 0 chr17 38744745 38745074 -50759479 - AluSp SINE Alu 0 330 1 2072 95 33 0 chr17 38745081 38745394 -50759159 - AluSp SINE Alu 0 322 1 2320 64 0 0 chr17 38745580 38745887 -50758666 + AluY SINE Alu 2 308 0 2446 47 0 3 chr17 38746023 38746320 -50758233 - AluY SINE Alu -15 296 1 198 0 0 0 chr17 38746951 38746973 -50757580 + (A)n Simple_repeat Simple_repeat 1 22 0 2528 31 27 0 chr17 38747301 38747593 -50756960 - AluY SINE Alu -11 300 1 908 143 0 0 chr17 38747617 38747750 -50756803 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr17 38748210 38748231 -50756322 + AT_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr17 38750189 38750215 -50754338 + (TA)n Simple_repeat Simple_repeat 1 26 0 2228 116 0 7 chr17 38750959 38751260 -50753293 - AluSx SINE Alu -11 301 3 584 159 44 9 chr17 38751352 38751465 -50753088 - MIR SINE MIR -41 221 105 521 252 189 9 chr17 38752132 38752315 -50752238 - MIR SINE MIR -44 218 3 33 0 0 0 chr17 38752690 38752723 -50751830 + AT_rich Low_complexity Low_complexity 1 33 0 186 133 0 0 chr17 38755190 38755220 -50749333 + (TTA)n Simple_repeat Simple_repeat 2 31 0 206 141 76 22 chr17 38755442 38755534 -50749019 + (TA)n Simple_repeat Simple_repeat 2 98 0 1237 219 131 88 chr17 38755582 38756286 -50748267 - MER21B LTR ERV1 -124 739 6 231 345 86 29 chr17 38756527 38756666 -50747887 - MER5B DNA MER1_type -30 148 2 1235 179 77 3 chr17 38756676 38756973 -50747580 - MER33 DNA MER1_type 0 324 6 478 218 148 0 chr17 38757286 38757387 -50747166 - FLAM_A SINE Alu -16 117 2 2410 77 0 0 chr17 38757424 38757724 -50746829 - AluY SINE Alu 0 311 12 2150 115 10 0 chr17 38757903 38758207 -50746346 - AluSp SINE Alu -6 307 1 234 62 0 0 chr17 38758325 38758357 -50746196 + (TTTTTG)n Simple_repeat Simple_repeat 5 36 0 225 0 0 0 chr17 38758978 38759003 -50745550 + (CA)n Simple_repeat Simple_repeat 2 26 0 301 115 16 16 chr17 38759003 38759064 -50745489 + (TG)n Simple_repeat Simple_repeat 2 62 0 1698 176 40 17 chr17 38761815 38761999 -50742554 - AluJb SINE Alu -3 309 114 309 51 0 0 chr17 38761999 38762038 -50742515 + (TG)n Simple_repeat Simple_repeat 2 40 0 1698 176 40 17 chr17 38762038 38762155 -50742398 - AluJb SINE Alu -198 114 1 2845 248 178 52 chr17 38812187 38813437 -50691116 + L2 LINE L2 695 2102 -1212 271 214 0 0 chr17 38813444 38813500 -50691053 + L1ME1 LINE L1 6019 6074 -92 234 222 0 0 chr17 38815436 38815490 -50689063 + A-rich Low_complexity Low_complexity 1 54 0 1592 187 3 7 chr17 38816857 38817157 -50687396 + AluJo SINE Alu 1 299 -13 1349 213 61 36 chr17 38817157 38817518 -50687035 + L1ME2 LINE L1 5786 6155 -9 1617 169 0 60 chr17 38817528 38817842 -50686711 - AluJo SINE Alu -17 295 1 2221 112 0 0 chr17 38817864 38818160 -50686393 - AluSx SINE Alu -16 296 1 1189 35 0 21 chr17 38818959 38819103 -50685450 - L1PA4 LINE L1 0 6155 6015 256 304 32 40 chr17 38820863 38820988 -50683565 - L3b LINE CR1 -136 1447 1324 234 255 0 0 chr17 38821260 38821307 -50683246 - MIR SINE MIR -147 115 69 319 284 0 0 chr17 38821507 38821602 -50682951 - AluSp/q SINE Alu 0 303 209 1038 269 60 3 chr17 38821689 38821972 -50682581 - AluSc SINE Alu 0 299 1 270 0 0 0 chr17 38822131 38822161 -50682392 + (TG)n Simple_repeat Simple_repeat 2 31 0 1693 172 40 17 chr17 38824912 38825096 -50679457 - AluJb SINE Alu -3 309 114 309 51 0 0 chr17 38825096 38825135 -50679418 + (TG)n Simple_repeat Simple_repeat 2 40 0 1693 172 40 17 chr17 38825135 38825252 -50679301 - AluJb SINE Alu -198 114 1 895 153 0 44 chr17 38825497 38825634 -50678919 + FLAM_C SINE Alu 1 131 -2 25 0 0 0 chr17 38827704 38827729 -50676824 + AT_rich Low_complexity Low_complexity 1 25 0 275 322 17 9 chr17 38830121 38830236 -50674317 + GA-rich Low_complexity Low_complexity 1 116 0 903 159 8 0 chr17 38831102 38831234 -50673319 - FLAM_C SINE Alu 0 133 1 405 234 51 51 chr17 38831246 38831263 -50673290 - L1MA10 LINE L1 -3 6331 6315 2277 198 110 15 chr17 38831263 38831848 -50672705 - L1ME1 LINE L1 -5 6161 5432 2324 93 0 10 chr17 38831848 38832158 -50672395 + AluSc SINE Alu 1 307 -2 2277 198 110 15 chr17 38832158 38832389 -50672164 - L1ME1 LINE L1 -734 5432 5224 220 267 178 0 chr17 38832628 38832729 -50671824 + L2 LINE L2 3176 3294 -19 425 319 97 14 chr17 38835223 38835439 -50669114 + L3 LINE CR1 1342 1575 -2 22 0 0 0 chr17 38835500 38835522 -50669031 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr17 38835563 38835606 -50668947 + AT_rich Low_complexity Low_complexity 1 43 0 768 148 47 54 chr17 38836628 38836777 -50667776 - AluJo SINE Alu -159 153 6 248 313 84 0 chr17 38836808 38836891 -50667662 - MIR SINE MIR -108 154 65 2246 109 3 0 chr17 38836908 38837210 -50667343 - AluSq SINE Alu -10 303 1 213 65 0 0 chr17 38837213 38837244 -50667309 + (T)n Simple_repeat Simple_repeat 1 31 0 888 253 0 15 chr17 38838225 38838423 -50666130 - MIR SINE MIR -51 211 17 24 53 0 0 chr17 38838426 38838464 -50666089 + AT_rich Low_complexity Low_complexity 1 38 0 193 179 0 30 chr17 38838914 38838981 -50665572 + CT-rich Low_complexity Low_complexity 1 65 0 210 132 57 0 chr17 38841911 38841964 -50662589 + GA-rich Low_complexity Low_complexity 2 57 0 686 183 17 0 chr17 38843958 38844073 -50660480 - FLAM_A SINE Alu -14 128 12 389 261 46 8 chr17 38844079 38844209 -50660344 - MIR SINE MIR -48 214 80 394 287 28 0 chr17 38844775 38844883 -50659670 + L2 LINE L2 3189 3299 -14 215 59 0 29 chr17 38844883 38844917 -50659636 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 1723 162 3 48 chr17 38845386 38845479 -50659074 + AluJo SINE Alu 1 97 -215 2204 119 0 0 chr17 38845479 38845773 -50658780 + AluSx SINE Alu 1 294 -18 1723 162 3 48 chr17 38845773 38845988 -50658565 + AluJo SINE Alu 97 295 -17 2395 100 0 0 chr17 38845992 38846301 -50658252 + AluSc SINE Alu 1 309 0 2379 61 7 0 chr17 38846885 38847180 -50657373 - AluY SINE Alu -14 297 1 1181 30 0 7 chr17 38847180 38847315 -50657238 - AluSc SINE Alu -175 134 1 204 241 56 0 chr17 38847381 38847435 -50657118 + MIR SINE MIR 132 188 -74 2303 199 118 20 chr17 38848533 38849040 -50655513 + MER119 DNA MER1_type 27 583 0 440 284 115 29 chr17 38849040 38849245 -50655308 + L1ME4a LINE L1 4440 4626 -1520 1432 231 3 3 chr17 38849245 38849539 -50655014 + AluJo SINE Alu 1 294 -18 440 284 115 29 chr17 38849539 38849682 -50654871 + L1ME4a LINE L1 4626 4818 -1328 2239 109 0 3 chr17 38849716 38850018 -50654535 - AluSx SINE Alu -11 301 1 422 291 147 65 chr17 38850060 38850535 -50654018 + L1ME4a LINE L1 5384 5897 -224 231 233 135 43 chr17 38850542 38850705 -50653848 + L1ME4a LINE L1 5923 6100 -21 231 304 18 0 chr17 38850730 38850786 -50653767 - MIR SINE MIR -167 95 39 2562 68 0 0 chr17 38851264 38851574 -50652979 - AluY SINE Alu -1 310 1 2122 252 72 60 chr17 38852140 38852741 -50651812 - L2 LINE L2 -6 3307 2682 2083 128 3 22 chr17 38852741 38853053 -50651500 - AluSx SINE Alu -6 306 1 2122 252 72 60 chr17 38853053 38853512 -50651041 - L2 LINE L2 -631 2682 2230 1075 208 127 9 chr17 38853630 38853842 -50650711 - MER8 DNA MER2_type -1 238 2 2098 93 11 0 chr17 38854430 38854710 -50649843 - AluSc SINE Alu -26 283 1 207 0 0 0 chr17 38854711 38854734 -50649819 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1705 171 0 11 chr17 38854734 38855021 -50649532 - AluJo SINE Alu -28 284 1 21 0 0 0 chr17 38855733 38855754 -50648799 + AT_rich Low_complexity Low_complexity 1 21 0 1862 159 0 7 chr17 38855754 38856044 -50648509 - AluJb SINE Alu -24 288 1 280 125 0 0 chr17 38856174 38856222 -50648331 - MADE1 DNA Mariner 0 80 33 264 30 0 0 chr17 38856237 38856270 -50648283 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1742 180 0 7 chr17 38856272 38856556 -50647997 - AluJb SINE Alu -30 282 1 3292 268 60 49 chr17 38857661 38858338 -50646215 + L1ME3A LINE L1 3712 4380 -1782 1769 181 3 7 chr17 38858338 38858625 -50645928 + AluJo SINE Alu 1 286 -26 3292 268 60 49 chr17 38858625 38859427 -50645126 + L1ME3A LINE L1 4380 5172 -990 1720 152 4 4 chr17 38859427 38859697 -50644856 + AluJo SINE Alu 21 290 -22 3292 268 60 49 chr17 38859697 38860504 -50644049 + L1ME3A LINE L1 5172 6050 -112 2069 142 0 19 chr17 38860607 38860925 -50643628 - AluSx SINE Alu 0 312 1 219 226 38 19 chr17 38861887 38861940 -50642613 - L3 LINE CR1 -1 1576 1523 596 227 0 111 chr17 38862052 38862224 -50642329 - MIR3 SINE MIR -55 153 1 308 75 0 38 chr17 38864550 38864603 -50639950 + (GGA)n Simple_repeat Simple_repeat 1 51 0 215 139 28 0 chr17 38864946 38864982 -50639571 + CT-rich Low_complexity Low_complexity 1 37 0 794 163 0 57 chr17 38866235 38866376 -50638177 - FLAM_C SINE Alu 0 133 1 2306 88 3 0 chr17 38867033 38867362 -50637191 - AluSp SINE Alu 0 330 1 2079 95 33 0 chr17 38867369 38867677 -50636876 - AluSp SINE Alu 0 317 1 198 0 0 0 chr17 38868403 38868425 -50636128 + (A)n Simple_repeat Simple_repeat 1 22 0 2542 31 27 0 chr17 38868753 38869046 -50635507 - AluY SINE Alu -10 301 1 900 143 0 0 chr17 38869070 38869203 -50635350 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr17 38869663 38869684 -50634869 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr17 38871642 38871666 -50632887 + (TA)n Simple_repeat Simple_repeat 1 24 0 2202 115 0 0 chr17 38872424 38872711 -50631842 - AluSx SINE Alu -23 289 3 587 159 44 9 chr17 38872803 38872916 -50631637 - MIR SINE MIR -41 221 105 526 252 189 9 chr17 38873583 38873766 -50630787 - MIR SINE MIR -44 218 3 33 0 0 0 chr17 38874141 38874174 -50630379 + AT_rich Low_complexity Low_complexity 1 33 0 186 133 0 0 chr17 38876640 38876670 -50627883 + (TTA)n Simple_repeat Simple_repeat 2 31 0 206 141 76 22 chr17 38876892 38876984 -50627569 + (TA)n Simple_repeat Simple_repeat 2 98 0 1448 219 131 88 chr17 38877032 38877736 -50626817 - MER21B LTR ERV1 -124 739 6 231 345 86 29 chr17 38877977 38878116 -50626437 - MER5B DNA MER1_type -30 148 2 1319 183 76 3 chr17 38878126 38878427 -50626126 - MER33 DNA MER1_type 0 324 2 537 198 148 0 chr17 38878736 38878837 -50625716 - FLAM_A SINE Alu -16 117 2 2395 77 0 0 chr17 38878874 38879174 -50625379 - AluY SINE Alu 0 311 12 2133 113 10 0 chr17 38879353 38879654 -50624899 - AluSp SINE Alu -6 307 4 234 62 0 0 chr17 38879775 38879807 -50624746 + (TTTTTG)n Simple_repeat Simple_repeat 5 36 0 225 0 0 0 chr17 38881751 38881776 -50622777 + (T)n Simple_repeat Simple_repeat 1 25 0 207 180 40 20 chr17 38887872 38887922 -50616631 + L2 LINE L2 3020 3070 -243 314 323 44 38 chr17 38888014 38888172 -50616381 - MIR SINE MIR -71 191 33 189 385 0 13 chr17 38888208 38888286 -50616267 - L2 LINE L2 -88 3184 3108 2317 81 3 0 chr17 38888665 38888979 -50615574 - AluSp SINE Alu 0 315 1 2256 84 7 7 chr17 38889181 38889479 -50615074 + AluSg SINE Alu 1 298 -12 231 313 0 61 chr17 38889535 38889634 -50614919 - MIR SINE MIR -58 150 58 228 67 0 0 chr17 38889713 38889743 -50614810 + (TA)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr17 38890423 38890445 -50614108 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr17 38890489 38890510 -50614043 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr17 38890585 38890613 -50613940 + AT_rich Low_complexity Low_complexity 1 28 0 1838 151 31 7 chr17 38890964 38891255 -50613298 - AluSx SINE Alu -14 298 1 644 125 0 45 chr17 38892417 38892529 -50612024 + FLAM_C SINE Alu 23 129 -14 2362 106 0 0 chr17 38893210 38893522 -50611031 - AluSx SINE Alu 0 312 1 221 306 229 6 chr17 38897960 38898117 -50606436 + MIR SINE MIR 21 212 -50 21 36 0 0 chr17 38899830 38899858 -50604695 + AT_rich Low_complexity Low_complexity 1 28 0 2179 121 7 3 chr17 38902026 38902333 -50602220 - AluSx SINE Alu -4 308 1 900 128 0 15 chr17 38902453 38902586 -50601967 - FLAM_C SINE Alu 0 133 3 1586 69 178 32 chr17 38906191 38906438 -50598115 - AluY SINE Alu -18 283 1 1041 186 40 29 chr17 38906470 38906729 -50597824 - L1MC/D LINE L1 -409 5757 5504 32 43 0 0 chr17 38907617 38907663 -50596890 + AT_rich Low_complexity Low_complexity 1 46 0 2558 64 0 3 chr17 38908057 38908368 -50596185 - AluY SINE Alu -1 310 1 24 67 0 0 chr17 38909765 38909810 -50594743 + AT_rich Low_complexity Low_complexity 1 45 0 331 110 14 55 chr17 38910852 38910925 -50593628 + L1MC5 LINE L1 7634 7703 -258 526 200 166 11 chr17 38910978 38911153 -50593400 + L1MC5 LINE L1 7709 7910 -51 1697 176 30 3 chr17 38911158 38911459 -50593094 - AluJb SINE Alu -3 309 1 261 0 0 0 chr17 38912683 38912712 -50591841 + (CA)n Simple_repeat Simple_repeat 1 29 0 2506 74 0 0 chr17 38915151 38915460 -50589093 + AluSc SINE Alu 1 309 0 1797 131 0 67 chr17 38915821 38915972 -50588581 + AluSx SINE Alu 1 122 -190 387 0 0 0 chr17 38915972 38916015 -50588538 + (TA)n Simple_repeat Simple_repeat 1 43 0 1797 131 0 67 chr17 38916015 38916177 -50588376 + AluSx SINE Alu 122 293 -19 27 29 0 0 chr17 38916367 38916401 -50588152 + AT_rich Low_complexity Low_complexity 1 34 0 195 281 158 0 chr17 38918657 38918739 -50585814 + MIR3 SINE MIR 110 204 -4 180 209 119 45 chr17 38918997 38919064 -50585489 + L2 LINE L2 1637 1708 -1606 21 0 0 0 chr17 38921578 38921599 -50582954 + AT_rich Low_complexity Low_complexity 1 21 0 613 247 74 0 chr17 38921761 38921923 -50582630 - MIR SINE MIR -16 246 73 849 182 10 48 chr17 38922120 38922329 -50582224 - L1MD3 LINE L1 -24 7971 7771 2061 106 4 0 chr17 38922381 38922646 -50581907 + AluSx SINE Alu 1 266 -46 558 149 0 0 chr17 38922646 38922733 -50581820 + AluSg/x SINE Alu 219 305 -7 1906 94 0 65 chr17 38922771 38923047 -50581506 + AluSg SINE Alu 33 290 -20 242 175 0 0 chr17 38923074 38923114 -50581439 + MIR SINE MIR 93 132 -130 577 273 150 5 chr17 38923141 38923361 -50581192 - MIR SINE MIR 0 262 11 217 184 41 0 chr17 38923377 38923426 -50581127 + MIR SINE MIR 211 261 -1 1997 129 3 35 chr17 38923561 38923879 -50580674 + AluJb SINE Alu 1 308 -4 2078 139 0 7 chr17 38924023 38924325 -50580228 + AluJo SINE Alu 1 300 -12 428 300 0 50 chr17 38924541 38924681 -50579872 - MIR SINE MIR -108 154 22 222 243 40 0 chr17 38925351 38925425 -50579128 - L2 LINE L2 -1107 2207 2131 21 0 0 0 chr17 38925581 38925602 -50578951 + AT_rich Low_complexity Low_complexity 1 21 0 1824 178 0 7 chr17 38925604 38925907 -50578646 + AluJo SINE Alu 1 301 -11 1642 131 39 11 chr17 38925945 38926205 -50578348 - AluSx SINE Alu -21 291 25 576 158 53 9 chr17 38926216 38926330 -50578223 - L1MB7 LINE L1 -43 6141 6023 729 185 0 8 chr17 38926370 38926500 -50578053 - L1ME1 LINE L1 -5 6161 6033 4275 236 154 42 chr17 38926500 38928186 -50576367 - L2 LINE L2 -1182 2132 258 21 36 0 0 chr17 38928354 38928382 -50576171 + AT_rich Low_complexity Low_complexity 1 28 0 1031 114 126 0 chr17 38929114 38929289 -50575264 + MSTB LTR MaLR 1 197 -229 288 0 0 0 chr17 38929905 38929937 -50574616 + (A)n Simple_repeat Simple_repeat 1 32 0 1187 159 22 22 chr17 38929970 38930197 -50574356 + MSTB LTR MaLR 200 426 0 35 24 0 0 chr17 38931700 38931742 -50572811 + AT_rich Low_complexity Low_complexity 1 42 0 35 24 0 0 chr17 38931786 38931828 -50572725 + AT_rich Low_complexity Low_complexity 1 42 0 717 94 0 9 chr17 38931868 38931974 -50572579 - AluSp/q SINE Alu 0 313 209 2304 78 55 0 chr17 38932051 38932344 -50572209 - AluSc SINE Alu 0 309 1 706 141 50 0 chr17 38937784 38937905 -50566648 - AluJb SINE Alu -22 290 164 2139 114 10 3 chr17 38939358 38939655 -50564898 + AluSq SINE Alu 1 299 -14 2453 87 3 3 chr17 38939730 38940041 -50564512 + AluSx SINE Alu 1 311 -1 369 0 0 0 chr17 38940280 38940321 -50564232 + (TG)n Simple_repeat Simple_repeat 2 42 0 517 256 30 32 chr17 38941042 38941275 -50563278 - MIR SINE MIR 0 262 32 1018 184 41 0 chr17 38941469 38941665 -50562888 - L1MB4 LINE L1 0 6180 5977 21 36 0 0 chr17 38942516 38942544 -50562009 + AT_rich Low_complexity Low_complexity 1 28 0 1728 152 16 55 chr17 38943623 38943932 -50560621 + AluJb SINE Alu 1 297 -15 207 229 165 46 chr17 38944009 38944118 -50560435 + MIR SINE MIR 117 238 -24 1480 204 41 3 chr17 38945356 38945650 -50558903 - AluJo SINE Alu -7 305 1 1378 153 22 0 chr17 38945697 38945920 -50558633 - AluJo SINE Alu 0 312 85 307 247 35 0 chr17 38946068 38946153 -50558400 - L2 LINE L2 0 3313 3226 552 205 102 98 chr17 38947383 38947598 -50556955 + MIR SINE MIR 26 241 -21 321 26 0 0 chr17 38947822 38947860 -50556693 + (TAGA)n Simple_repeat Simple_repeat 2 39 0 234 222 0 0 chr17 38949786 38949840 -50554713 + T-rich Low_complexity Low_complexity 1 54 0 211 297 99 22 chr17 38950457 38950548 -50554005 + MIR SINE MIR 95 192 -70 194 311 126 8 chr17 38950858 38950977 -50553576 - MIR3 SINE MIR -63 145 13 2387 81 3 0 chr17 38951224 38951519 -50553034 + AluSp SINE Alu 3 298 -15 2420 100 3 0 chr17 38954017 38954326 -50550227 - AluSp SINE Alu -2 311 2 1157 110 0 0 chr17 38954417 38954571 -50549982 - AluSg/x SINE Alu -14 296 143 1533 179 16 26 chr17 38954943 38955250 -50549303 - AluJb SINE Alu -8 304 1 591 235 221 5 chr17 38955366 38955570 -50548983 + MIR SINE MIR 15 262 0 1246 92 179 5 chr17 38955692 38955888 -50548665 - MER30 DNA MER1_type 0 230 1 1486 140 23 45 chr17 38955889 38956154 -50548399 - AluJo SINE Alu -52 260 2 303 49 0 0 chr17 38956158 38956199 -50548354 + (TG)n Simple_repeat Simple_repeat 2 42 0 412 200 0 0 chr17 38956199 38956269 -50548284 - FLAM SINE Alu -16 117 48 24 32 0 0 chr17 38956810 38956841 -50547712 + AT_rich Low_complexity Low_complexity 1 31 0 339 234 35 113 chr17 38957334 38957408 -50547145 + MIR SINE MIR 14 73 -189 2281 106 10 0 chr17 38957408 38957710 -50546843 + AluSx SINE Alu 1 305 -7 339 234 35 113 chr17 38957710 38957776 -50546777 + MIR SINE MIR 73 143 -119 888 218 63 0 chr17 38958325 38958531 -50546022 + MIR SINE MIR 11 229 -33 4017 205 67 58 chr17 38958607 38958804 -50545749 - L1MC4 LINE L1 -5 8037 7843 2000 141 41 0 chr17 38958804 38959095 -50545458 - AluSx SINE Alu -9 303 1 4017 205 67 58 chr17 38959095 38960130 -50544423 - L1MC4 LINE L1 -199 7843 6794 247 253 0 79 chr17 38960193 38960383 -50544170 + CT-rich Low_complexity Low_complexity 1 175 0 429 356 7 0 chr17 38963127 38963262 -50541291 - L2 LINE L2 0 3272 3137 471 283 110 32 chr17 38963466 38963774 -50540779 - L2 LINE L2 -340 2974 2643 362 177 94 0 chr17 38964064 38964160 -50540393 + Charlie7 DNA MER1_type 51 155 -2457 364 253 148 44 chr17 38965979 38966112 -50538441 + MIR SINE MIR 56 214 -48 1890 170 0 0 chr17 38966112 38966406 -50538147 + AluJo SINE Alu 1 294 -18 364 253 148 44 chr17 38966406 38966454 -50538099 + MIR SINE MIR 214 256 -6 1454 160 73 24 chr17 38967616 38967904 -50536649 - AluJb SINE Alu -10 302 1 1784 177 14 0 chr17 38968034 38968328 -50536225 + AluJo SINE Alu 1 298 -14 728 206 37 102 chr17 38971406 38971731 -50532822 - L1MC4 LINE L1 -2 8040 7737 850 231 124 7 chr17 38971733 38972006 -50532547 - L1MC4 LINE L1 -503 7539 7235 369 312 145 27 chr17 38972086 38972307 -50532246 - L1MC4 LINE L1 -935 7107 6861 1976 122 24 10 chr17 38975581 38975876 -50528677 + AluSc SINE Alu 1 299 -10 245 237 254 65 chr17 38977652 38977821 -50526732 + MIR SINE MIR 10 210 -52 263 216 0 0 chr17 38978129 38978180 -50526373 + MIR3 SINE MIR 135 185 -23 1977 107 48 0 chr17 38978726 38979017 -50525536 + AluSx SINE Alu 1 305 -7 195 42 0 0 chr17 38979100 38979124 -50525429 + (A)n Simple_repeat Simple_repeat 1 24 0 1684 160 0 39 chr17 38979126 38979438 -50525115 + AluJb SINE Alu 1 300 -12 1905 126 8 62 chr17 38979447 38979640 -50524913 + L1MB3 LINE L1 5820 5987 -196 1726 144 0 69 chr17 38979640 38979946 -50524607 - AluJo SINE Alu -18 294 10 1905 126 8 62 chr17 38979946 38980108 -50524445 + L1MB3 LINE L1 5987 6156 -27 2009 250 76 24 chr17 38980134 38980988 -50523565 + L1ME1 LINE L1 1080 2132 -4431 1354 176 50 56 chr17 38981032 38981086 -50523467 + L1MB2 LINE L1 5254 5307 -864 2109 112 0 0 chr17 38981086 38981380 -50523173 - AluSx SINE Alu -18 294 1 1354 176 50 56 chr17 38981380 38981406 -50523147 + L1MB2 LINE L1 5307 5332 -839 1706 160 7 10 chr17 38981406 38981699 -50522854 + AluJb SINE Alu 1 292 -20 1354 176 50 56 chr17 38981699 38981974 -50522579 + L1MB2 LINE L1 5332 5608 -563 978 154 85 40 chr17 38981974 38982175 -50522378 + AluJb SINE Alu 1 210 -102 725 146 0 0 chr17 38982232 38982335 -50522218 + FRAM SINE Alu 41 143 -33 3272 126 33 28 chr17 38982335 38982692 -50521861 + L1MB2 LINE L1 5590 5953 -218 2081 116 17 0 chr17 38982692 38982994 -50521559 + AluSx SINE Alu 2 308 -4 3272 126 33 28 chr17 38982994 38983208 -50521345 + L1MB2 LINE L1 5953 6164 -7 21 0 0 0 chr17 38983223 38983244 -50521309 + AT_rich Low_complexity Low_complexity 1 21 0 1314 167 144 19 chr17 38983253 38983516 -50521037 + AluJo SINE Alu 1 296 -6 404 152 25 0 chr17 38983542 38983621 -50520932 + L1ME1 LINE L1 2364 2444 -3938 1748 147 0 43 chr17 38983625 38983951 -50520602 + AluJo SINE Alu 1 312 0 564 148 11 0 chr17 38983960 38984048 -50520505 - AluJo SINE Alu -119 193 105 833 239 31 41 chr17 38984056 38984349 -50520204 + L1ME1 LINE L1 2469 2758 -3624 4578 209 50 82 chr17 38984369 38984541 -50520012 + L1ME1 LINE L1 3295 3471 -2911 2314 94 0 0 chr17 38984541 38984850 -50519703 + AluSc SINE Alu 1 309 0 4578 209 50 82 chr17 38984850 38985116 -50519437 + L1ME1 LINE L1 3471 3744 -2638 2023 128 0 0 chr17 38985116 38985414 -50519139 + AluSx SINE Alu 1 298 -14 4578 209 50 82 chr17 38985414 38985490 -50519063 + L1ME1 LINE L1 3744 3821 -2561 2289 95 0 0 chr17 38985490 38985796 -50518757 + AluSg SINE Alu 1 306 -4 4578 209 50 82 chr17 38985796 38985968 -50518585 + L1ME1 LINE L1 3821 3997 -2385 942 214 12 0 chr17 38985968 38986136 -50518417 + FAM SINE Alu 1 170 -5 4578 209 50 82 chr17 38986136 38986170 -50518383 + L1ME1 LINE L1 3997 4031 -2351 1771 132 35 7 chr17 38986170 38986457 -50518096 - AluSx SINE Alu -12 300 6 4578 209 50 82 chr17 38986457 38986514 -50518039 + L1ME1 LINE L1 4031 4088 -2294 2424 78 12 27 chr17 38986514 38986849 -50517704 - L1PA8A LINE L1 -9 6122 5793 4578 209 50 82 chr17 38986849 38986871 -50517682 + L1ME1 LINE L1 4088 4109 -2273 1496 140 39 60 chr17 38986871 38987004 -50517549 + AluJb SINE Alu 17 151 -161 1860 151 7 3 chr17 38987004 38987308 -50517245 + AluSx SINE Alu 1 305 -7 1496 140 39 60 chr17 38987308 38987459 -50517094 + AluJb SINE Alu 151 295 -17 4578 209 50 82 chr17 38987459 38987664 -50516889 + L1ME1 LINE L1 4109 4319 -2063 1937 110 13 20 chr17 38987664 38987965 -50516588 + AluSx SINE Alu 2 300 -12 4578 209 50 82 chr17 38987965 38988584 -50515969 + L1ME1 LINE L1 4319 4873 -1509 1607 154 0 4 chr17 38988586 38988846 -50515707 + AluJo SINE Alu 1 259 -53 3275 210 87 20 chr17 38989300 38989815 -50514738 + L1ME1 LINE L1 4875 5354 -1048 2181 87 30 0 chr17 38989815 38990115 -50514438 + AluSc SINE Alu 1 309 0 3275 210 87 20 chr17 38990115 38991028 -50513525 + L1ME1 LINE L1 5354 6399 -3 1975 124 7 0 chr17 38991048 38991331 -50513222 + AluSx SINE Alu 1 285 -27 433 178 93 56 chr17 38994503 38994610 -50509943 - MER3 DNA MER1_type -98 111 1 208 188 62 0 chr17 38995142 38995190 -50509363 + L2 LINE L2 3262 3312 -1 184 261 204 23 chr17 38995258 38995346 -50509207 - MIR3 SINE MIR -21 187 84 1726 130 3 60 chr17 38996228 38996544 -50508009 - AluJo SINE Alu -14 298 1 1735 117 23 0 chr17 38996568 38996833 -50507720 + AluSx SINE Alu 42 312 0 256 244 29 107 chr17 38997861 38998066 -50506487 + L1ME LINE L1 5585 5773 -348 1952 136 3 0 chr17 38998401 38998702 -50505851 + AluJb SINE Alu 1 302 -10 2071 126 0 7 chr17 38999859 39000160 -50504393 + AluSx SINE Alu 1 299 -13 848 136 0 58 chr17 39000649 39000804 -50503749 + AluJb SINE Alu 137 282 -30 328 74 0 56 chr17 39000848 39000902 -50503651 - MER66A LTR ERV1 -141 337 287 2032 116 27 0 chr17 39000968 39001269 -50503284 - AluSx SINE Alu -3 309 1 2138 160 52 40 chr17 39001289 39001514 -50503039 - L1MA7 LINE L1 -3 6288 6067 1684 120 0 19 chr17 39001514 39001772 -50502781 + AluSq SINE Alu 1 253 -60 291 71 0 0 chr17 39001776 39001818 -50502735 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 2138 160 52 40 chr17 39001818 39002067 -50502486 - L1MA7 LINE L1 -226 6065 5803 1416 203 35 140 chr17 39002077 39002241 -50502312 + L1M1 LINE L1 5268 5448 -857 2250 103 0 0 chr17 39002241 39002551 -50502002 + AluSg SINE Alu 1 310 0 1416 203 35 140 chr17 39002551 39002958 -50501595 + L1M1 LINE L1 5448 5779 -526 2696 215 77 67 chr17 39005917 39006075 -50498478 - Charlie2 DNA MER1_type -65 2797 2642 2222 62 4 0 chr17 39006075 39006351 -50498202 - AluSc SINE Alu -21 288 12 2696 215 77 67 chr17 39006351 39007131 -50497422 - Charlie2 DNA MER1_type -220 2642 1850 537 267 144 44 chr17 39007115 39007385 -50497168 - Charlie2 DNA MER1_type -2451 331 35 * 345 102 0 0 chr17 39008214 39008273 -50496280 + (TG)n Simple_repeat Simple_repeat 2 60 0 823 146 31 0 chr17 39008880 39009010 -50495543 + AluJo SINE Alu 1 134 -178 675 305 138 16 chr17 39009690 39010067 -50494486 - L3 LINE CR1 -156 1421 999 2400 47 0 10 chr17 39010329 39010630 -50493923 - AluY SINE Alu -13 298 1 391 265 31 0 chr17 39010776 39010874 -50493679 + MIR SINE MIR 51 151 -111 2253 106 0 0 chr17 39011280 39011592 -50492961 + AluSx SINE Alu 1 312 0 22 0 0 0 chr17 39012852 39012874 -50491679 + AT_rich Low_complexity Low_complexity 1 22 0 405 58 0 0 chr17 39013168 39013220 -50491333 + (TG)n Simple_repeat Simple_repeat 2 53 0 1159 196 26 18 chr17 39015074 39015303 -50489250 + MER46A DNA MER2_type 6 236 0 2417 81 0 0 chr17 39016911 39017221 -50487332 + AluY SINE Alu 2 311 0 1847 142 0 35 chr17 39017230 39017548 -50487005 + AluJo SINE Alu 1 307 -5 322 258 131 79 chr17 39017626 39018054 -50486499 + L1ME4a LINE L1 5003 5461 -769 2193 106 3 0 chr17 39018146 39018449 -50486104 + AluSx SINE Alu 1 304 -8 315 218 248 10 chr17 39018510 39018813 -50485740 + L1ME4a LINE L1 5572 5946 -175 312 187 0 13 chr17 39018877 39018952 -50485601 + L1ME4a LINE L1 6048 6121 0 661 295 58 10 chr17 39019347 39019554 -50484999 + MIR SINE MIR 34 250 -12 22 0 0 0 chr17 39019843 39019865 -50484688 + AT_rich Low_complexity Low_complexity 1 22 0 2695 126 12 12 chr17 39021816 39022244 -50482309 - MSTA LTR MaLR 0 428 1 387 189 0 0 chr17 39022264 39022354 -50482199 - L1MA4A LINE L1 -2 6301 6212 2150 100 0 29 chr17 39022637 39022947 -50481606 + AluSc SINE Alu 1 301 -8 996 190 0 6 chr17 39023856 39024030 -50480523 + FRAM SINE Alu 1 166 -10 531 122 0 0 chr17 39024205 39024279 -50480274 + AluS SINE Alu 1 74 -238 899 107 8 0 chr17 39024289 39024410 -50480143 + AluSg/x SINE Alu 176 297 -15 237 344 41 0 chr17 39024423 39024545 -50480008 - L1MC/D LINE L1 -2226 5582 5456 1179 117 0 0 chr17 39024574 39024737 -50479816 + AluSg/x SINE Alu 140 302 -8 2534 62 3 0 chr17 39024803 39025108 -50479445 - AluY SINE Alu -5 306 1 501 228 114 64 chr17 39025960 39026179 -50478374 + MLT1L LTR MaLR 165 394 -221 258 260 149 0 chr17 39027031 39027185 -50477368 + L1ME LINE L1 5684 5860 -261 1904 177 87 18 chr17 39027307 39027754 -50476799 + L1MC4 LINE L1 6671 7148 -894 1975 141 26 18 chr17 39028509 39028850 -50475703 + MER2 DNA MER2_type 1 344 0 24 0 0 0 chr17 39029617 39029641 -50474912 + AT_rich Low_complexity Low_complexity 1 24 0 804 168 0 0 chr17 39029741 39029860 -50474693 + FLAM_C SINE Alu 1 119 -24 1367 127 8 99 chr17 39029951 39030085 -50474468 + AluJo SINE Alu 1 146 -166 2138 123 7 3 chr17 39030085 39030393 -50474160 + AluSx SINE Alu 1 309 -3 1367 127 8 99 chr17 39030393 39030404 -50474149 + AluJo SINE Alu 146 156 -156 2259 112 0 13 chr17 39030404 39030717 -50473836 + AluSx SINE Alu 1 309 -3 1367 127 8 99 chr17 39030717 39030823 -50473730 + AluJo SINE Alu 156 230 -82 322 140 0 18 chr17 39030828 39030885 -50473668 - AluJ/FRAM SINE Alu -27 275 220 1767 178 7 0 chr17 39031145 39031448 -50473105 - AluJb SINE Alu -7 305 1 1785 149 3 70 chr17 39031507 39031822 -50472731 - AluJb SINE Alu -18 294 1 231 310 81 0 chr17 39031829 39031916 -50472637 - L1MC/D LINE L1 -2165 5643 5550 22 56 0 0 chr17 39031924 39031960 -50472593 + AT_rich Low_complexity Low_complexity 1 36 0 1207 192 48 16 chr17 39032113 39032426 -50472127 + MER33 DNA MER1_type 2 324 0 328 271 71 0 chr17 39033193 39033278 -50471275 + MIR SINE MIR 13 103 -159 * 898 249 28 23 chr17 39033251 39033468 -50471085 - MIR SINE MIR -25 237 20 2042 187 56 6 chr17 39033691 39034188 -50470365 - L1MC4a LINE L1 -228 7580 7059 2205 119 0 0 chr17 39034982 39035275 -50469278 - AluSx SINE Alu -19 293 1 245 288 34 0 chr17 39035487 39035546 -50469007 + MIR SINE MIR 13 73 -189 1594 161 37 68 chr17 39035808 39036162 -50468391 - MER2 DNA MER2_type -1 343 1 503 314 147 5 chr17 39036686 39036890 -50467663 - MIR SINE MIR -10 252 20 1006 219 32 16 chr17 39037154 39037401 -50467152 - MIR SINE MIR 0 262 12 372 341 46 17 chr17 39037552 39037725 -50466828 + L3b LINE CR1 1359 1536 -47 333 0 0 0 chr17 39037829 39037866 -50466687 + (CA)n Simple_repeat Simple_repeat 1 37 0 33 60 0 24 chr17 39038127 39038155 -50466398 + AT_rich Low_complexity Low_complexity 1 28 -53 1547 6 0 0 chr17 39038155 39038324 -50466229 - AluY SINE Alu -10 301 133 2218 126 0 0 chr17 39038324 39038633 -50465920 - AluSx SINE Alu -3 309 1 33 60 0 24 chr17 39038633 39038686 -50465867 + AT_rich Low_complexity Low_complexity 26 81 0 521 177 50 96 chr17 39039578 39039798 -50464755 - L1MC5 LINE L1 -212 7749 7540 21 36 0 0 chr17 39040172 39040200 -50464353 + AT_rich Low_complexity Low_complexity 1 28 0 287 239 128 0 chr17 39043684 39043793 -50460760 + HAL1 LINE L1 7 129 -2378 282 299 112 72 chr17 39043985 39044263 -50460290 + HAL1 LINE L1 387 675 -1832 1213 193 13 81 chr17 39044304 39044687 -50459866 + MLT1A1 LTR MaLR 1 357 -8 774 223 156 80 chr17 39044782 39045431 -50459122 + HAL1 LINE L1 765 1484 -1023 421 220 127 17 chr17 39045431 39045549 -50459004 - MER94 DNA DNA -3 131 1 774 223 156 80 chr17 39045549 39045676 -50458877 + HAL1 LINE L1 1484 1600 -907 471 127 28 0 chr17 39045676 39045786 -50458767 - AluSg/x SINE Alu 0 318 207 455 247 151 27 chr17 39045812 39046237 -50458316 + HAL1 LINE L1 1618 2118 -389 2001 165 80 8 chr17 39046237 39046638 -50457915 + MSTB1 LTR MaLR 3 432 0 455 247 151 27 chr17 39046638 39046681 -50457872 + HAL1 LINE L1 2118 2154 -353 2459 132 68 15 chr17 39046686 39047261 -50457292 - L1M4 LINE L1 -705 5469 4856 2001 110 24 10 chr17 39047627 39047919 -50456634 + AluSx SINE Alu 1 296 -16 257 307 83 51 chr17 39048078 39048332 -50456221 + L2 LINE L2 1807 2068 -1246 293 212 222 48 chr17 39048386 39048575 -50455978 + L2 LINE L2 2380 2601 -713 2214 96 0 13 chr17 39048590 39048891 -50455662 - AluSx SINE Alu -15 297 1 185 319 97 65 chr17 39049071 39049454 -50455099 + L2 LINE L2 2815 3209 -63 931 46 0 0 chr17 39049515 39049623 -50454930 - AluY SINE Alu -23 288 181 2144 100 0 0 chr17 39050214 39050494 -50454059 + AluSg SINE Alu 1 280 -30 384 145 0 0 chr17 39051068 39051130 -50453423 - Alu SINE Alu -5 297 236 225 0 0 0 chr17 39051249 39051274 -50453279 + (A)n Simple_repeat Simple_repeat 1 25 0 475 115 23 46 chr17 39051274 39051361 -50453192 + L2 LINE L2 1881 1965 -1349 5214 184 28 40 chr17 39051361 39052063 -50452490 - L1M4 LINE L1 -1078 5068 4359 2219 74 13 33 chr17 39052063 39052362 -50452191 - AluY SINE Alu -18 293 1 5214 184 28 40 chr17 39052362 39052526 -50452027 - L1M4 LINE L1 -1787 4359 4195 2193 106 3 3 chr17 39052526 39052828 -50451725 - AluSx SINE Alu -10 302 1 5214 184 28 40 chr17 39052828 39053273 -50451280 - L1M4 LINE L1 -1951 4195 3772 226 152 22 22 chr17 39053274 39053320 -50451233 + CT-rich Low_complexity Low_complexity 3 48 0 293 115 0 0 chr17 39053422 39053474 -50451079 + AluSc SINE Alu 248 299 0 810 254 33 39 chr17 39053491 39053749 -50450804 + L1M4 LINE L1 3243 3500 -2646 2133 130 0 0 chr17 39053749 39054048 -50450505 + AluSx SINE Alu 1 299 -13 810 254 33 39 chr17 39054048 39054124 -50450429 + L1M4 LINE L1 3500 3575 -2571 2247 112 0 3 chr17 39054124 39054436 -50450117 + AluY SINE Alu 1 311 0 1958 145 0 35 chr17 39054445 39054763 -50449790 + AluJo SINE Alu 1 307 -5 2292 106 3 0 chr17 39055361 39055664 -50448889 + AluSx SINE Alu 1 304 -8 305 272 112 12 chr17 39055725 39055894 -50448659 + L1ME LINE L1 5572 5757 -364 1665 171 4 11 chr17 39056053 39056317 -50448236 + AluJb SINE Alu 7 268 -44 21 71 0 0 chr17 39056317 39056359 -50448194 + AT_rich Low_complexity Low_complexity 1 42 0 5588 116 14 1 chr17 39057204 39058130 -50446423 + L1PB1 LINE L1 5215 6150 -1 372 331 50 22 chr17 39058152 39058333 -50446220 - MIR3 SINE MIR -5 203 18 805 183 0 0 chr17 39058505 39058636 -50445917 + FLAM_C SINE Alu 3 133 0 3140 219 49 94 chr17 39059185 39059248 -50445305 - L2 LINE L2 -1 3312 3248 933 176 49 29 chr17 39059248 39059453 -50445100 - MER3 DNA MER1_type 0 209 1 3140 219 49 94 chr17 39059453 39060751 -50443802 - L2 LINE L2 -65 3248 1996 620 163 10 0 chr17 39060751 39060849 -50443704 + FRAM SINE Alu 48 146 -30 1723 174 0 4 chr17 39060934 39061210 -50443343 + AluJo SINE Alu 1 275 -37 309 109 47 0 chr17 39061216 39061280 -50443273 + GA-rich Low_complexity Low_complexity 2 68 0 1853 65 0 73 chr17 39061385 39061660 -50442893 + AluSq SINE Alu 59 313 0 1331 192 63 4 chr17 39061919 39062190 -50442363 - AluJo SINE Alu -25 287 1 620 241 126 11 chr17 39062361 39062552 -50442001 + MIR SINE MIR 36 248 -14 264 342 90 67 chr17 39062862 39063263 -50441290 + L2 LINE L2 2848 3257 -15 1469 205 0 53 chr17 39063268 39063570 -50440983 + AluJo SINE Alu 1 286 -26 2189 112 3 0 chr17 39064290 39064584 -50439969 - AluSp SINE Alu -18 295 1 1917 160 0 29 chr17 39064618 39064925 -50439628 - AluJo SINE Alu -13 299 2 674 270 9 26 chr17 39065291 39065521 -50439032 + L2 LINE L2 874 1099 -2215 1123 181 75 31 chr17 39065532 39065825 -50438728 - MER46C DNA MER2_type -25 313 8 1394 226 239 20 chr17 39065825 39066435 -50438118 + L2 LINE L2 1090 1833 -1481 2240 75 14 4 chr17 39066436 39066714 -50437839 - AluSq SINE Alu -22 291 11 1391 159 0 9 chr17 39066724 39066951 -50437602 - AluSx SINE Alu -87 225 1 2087 156 0 0 chr17 39067268 39067576 -50436977 + AluJo SINE Alu 1 308 -4 273 330 57 0 chr17 39068914 39069020 -50435533 + MIR SINE MIR 20 131 -77 204 231 0 0 chr17 39069087 39069139 -50435414 + (CATA)n Simple_repeat Simple_repeat 4 55 0 207 300 0 29 chr17 39069820 39069890 -50434663 + GA-rich Low_complexity Low_complexity 1 68 0 2541 61 0 0 chr17 39071251 39071548 -50433005 + AluY SINE Alu 1 297 -14 484 219 107 11 chr17 39072460 39072638 -50431915 + L1ME4a LINE L1 5260 5454 -2354 461 264 173 31 chr17 39072647 39072999 -50431554 + L1ME4a LINE L1 5548 5949 -172 2073 116 10 14 chr17 39074812 39075105 -50429448 - AluSx SINE Alu -20 292 1 1807 172 0 10 chr17 39075845 39076141 -50428412 + AluJo SINE Alu 1 293 -19 461 252 8 8 chr17 39076677 39076800 -50427753 + MIR SINE MIR 138 260 -2 2186 110 0 23 chr17 39077289 39077597 -50426956 + AluSg SINE Alu 1 301 -9 1298 135 0 81 chr17 39077607 39077866 -50426687 + AluJo SINE Alu 54 291 -21 1444 196 7 37 chr17 39077894 39077936 -50426617 + AluJo SINE Alu 1 43 -269 2331 107 0 0 chr17 39077936 39078236 -50426317 + AluSx SINE Alu 1 300 -12 1444 196 7 37 chr17 39078236 39078489 -50426064 + AluJo SINE Alu 43 287 -25 2260 109 0 10 chr17 39079489 39079791 -50424762 + AluSx SINE Alu 3 301 -11 1757 182 0 25 chr17 39079795 39080114 -50424439 + AluJo SINE Alu 1 311 -1 1867 134 43 0 chr17 39080151 39080456 -50424097 + L1MB3 LINE L1 5866 6183 0 2085 136 3 0 chr17 39080486 39080795 -50423758 + AluY SINE Alu 1 310 -1 195 146 0 0 chr17 39080888 39080929 -50423624 + (A)n Simple_repeat Simple_repeat 1 41 0 2339 106 33 3 chr17 39080930 39081297 -50423256 + L1MB2 LINE L1 5792 6169 -2 737 176 8 0 chr17 39081312 39081524 -50423029 + FLAM_C SINE Alu 12 224 0 1165 150 0 0 chr17 39081524 39081697 -50422856 + AluJo/FRAM SINE Alu 131 303 -9 633 171 25 25 chr17 39082390 39082547 -50422006 + L1MC5 LINE L1 7772 7986 -9 2250 121 0 13 chr17 39082660 39082974 -50421579 + AluSg SINE Alu 1 310 0 475 214 258 11 chr17 39083782 39083964 -50420589 - MIR SINE MIR -2 260 34 1950 167 3 6 chr17 39084118 39084430 -50420123 - AluSq SINE Alu -2 311 1 2419 91 0 0 chr17 39084436 39084734 -50419819 - AluSq SINE Alu -15 298 1 1925 146 0 7 chr17 39085070 39085358 -50419195 + AluJo SINE Alu 11 296 -16 22 56 0 0 chr17 39085410 39085446 -50419107 + AT_rich Low_complexity Low_complexity 1 36 0 200 359 87 10 chr17 39085878 39085981 -50418572 + L3b LINE CR1 1473 1583 0 370 135 0 0 chr17 39086048 39086100 -50418453 + Alu SINE Alu 2 53 -255 185 185 15 0 chr17 39086107 39086172 -50418381 + (TA)n Simple_repeat Simple_repeat 2 67 0 368 252 111 44 chr17 39086353 39086488 -50418065 + MIR3 SINE MIR 58 201 -7 1648 155 16 63 chr17 39086743 39087060 -50417493 + AluJo SINE Alu 1 302 -10 334 360 18 9 chr17 39088461 39088575 -50415978 + MIR SINE MIR 32 146 -62 213 288 0 0 chr17 39090017 39090076 -50414477 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 32 43 0 0 chr17 39091076 39091122 -50413431 + AT_rich Low_complexity Low_complexity 1 46 0 591 230 7 20 chr17 39092297 39092445 -50412108 - MIR SINE MIR -2 260 115 21 0 0 0 chr17 39092830 39092851 -50411702 + AT_rich Low_complexity Low_complexity 1 21 0 715 306 72 3 chr17 39092881 39093201 -50411352 + L1ME LINE L1 5482 5823 -298 283 268 123 14 chr17 39093292 39093430 -50411123 + L1MC4 LINE L1 7641 7902 -140 1416 264 68 60 chr17 39093917 39094613 -50409940 + L1ME4a LINE L1 5347 6051 -70 2272 114 7 0 chr17 39094613 39094921 -50409632 - AluSx SINE Alu -2 310 1 1416 264 68 60 chr17 39094921 39094992 -50409561 + L1ME4a LINE L1 6051 6120 -1 231 114 0 0 chr17 39095567 39095602 -50408951 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 3318 202 60 37 chr17 39096792 39097880 -50406673 - L1ME1 LINE L1 -148 6018 4910 1520 180 47 13 chr17 39097880 39098180 -50406373 + AluJo SINE Alu 1 310 -2 3318 202 60 37 chr17 39098180 39098295 -50406258 - L1ME1 LINE L1 -1256 4910 4799 2737 192 102 14 chr17 39098398 39099053 -50405500 + L1ME1 LINE L1 5449 6161 -5 * 4625 242 151 37 chr17 39099046 39099783 -50404770 + HAL1 LINE L1 142 794 -1713 1808 174 7 26 chr17 39099783 39100093 -50404460 + AluJo SINE Alu 1 304 -8 198 0 0 0 chr17 39100100 39100122 -50404431 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 4625 242 151 37 chr17 39100122 39100135 -50404418 + HAL1 LINE L1 799 809 -1698 1749 181 26 3 chr17 39100135 39100439 -50404114 + AluJb SINE Alu 1 311 -1 4625 242 151 37 chr17 39100439 39101800 -50402753 + HAL1 LINE L1 809 2503 -4 880 94 0 17 chr17 39101810 39101927 -50402626 + AluJb SINE Alu 5 119 -193 278 239 67 112 chr17 39102075 39102146 -50402407 + HAL1 LINE L1 1033 1106 -1401 1901 159 0 10 chr17 39102146 39102441 -50402112 + AluJo SINE Alu 5 296 -16 278 239 67 112 chr17 39102441 39102787 -50401766 + HAL1 LINE L1 1106 1431 -1076 1219 165 4 30 chr17 39102787 39103017 -50401536 + AluJo SINE Alu 86 309 -3 504 204 61 66 chr17 39103019 39103133 -50401420 + HAL1 LINE L1 1425 1539 -968 2165 143 135 29 chr17 39103133 39103586 -50400967 + MLT1D LTR MaLR 3 503 -2 504 204 61 66 chr17 39103586 39103652 -50400901 + HAL1 LINE L1 1539 1604 -903 1005 157 13 0 chr17 39104068 39104227 -50400326 - AluSg/x SINE Alu -9 301 141 1008 197 49 131 chr17 39104232 39104583 -50399970 + L2 LINE L2 1520 1821 -1493 808 138 0 0 chr17 39104583 39104699 -50399854 - FLAM_C SINE Alu -17 116 1 1008 197 49 131 chr17 39104699 39104835 -50399718 + L2 LINE L2 1821 1967 -1347 2109 91 29 4 chr17 39105455 39105754 -50398799 - AluSq SINE Alu 0 306 1 303 102 51 51 chr17 39105953 39106012 -50398541 + MER66B LTR ERV1 287 345 -141 351 238 64 103 chr17 39106469 39106619 -50397934 + L1ME LINE L1 5457 5601 -520 2191 113 0 7 chr17 39106619 39106919 -50397634 + AluSq SINE Alu 1 298 -15 351 238 64 103 chr17 39106919 39106962 -50397591 + L1ME LINE L1 5601 5644 -477 1620 150 51 2 chr17 39106965 39107277 -50397276 + MER33 DNA MER1_type 1 323 -1 237 330 11 0 chr17 39107293 39107384 -50397169 + L1P4 LINE L1 5674 5765 -396 670 264 22 11 chr17 39107644 39107826 -50396727 + MIR SINE MIR 21 204 -58 21 0 0 0 chr17 39107871 39107892 -50396661 + AT_rich Low_complexity Low_complexity 1 21 0 218 167 0 0 chr17 39107943 39107979 -50396574 + MIR SINE MIR 217 252 -10 1626 74 5 0 chr17 39108623 39108826 -50395727 + AluSp SINE Alu 88 291 -22 262 286 113 100 chr17 39109235 39109564 -50394989 - L3 LINE CR1 -124 1453 1121 305 311 106 0 chr17 39111175 39111307 -50393246 - L2 LINE L2 -2 3270 3125 207 176 0 0 chr17 39115495 39115529 -50389024 + (TG)n Simple_repeat Simple_repeat 2 35 0 25 0 0 0 chr17 39116618 39116643 -50387910 + GC_rich Low_complexity Low_complexity 1 25 0 194 88 0 29 chr17 39119056 39119090 -50385463 + (TGGGGG)n Simple_repeat Simple_repeat 2 34 0 254 325 8 16 chr17 39119102 39119225 -50385328 + GA-rich Low_complexity Low_complexity 2 123 0 27 49 0 0 chr17 39122704 39122745 -50381808 + GC_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr17 39123203 39123224 -50381329 + GC_rich Low_complexity Low_complexity 1 21 0 236 164 36 18 chr17 39126660 39126715 -50377838 + G-rich Low_complexity Low_complexity 3 58 0 552 207 0 9 chr17 39129962 39130073 -50374480 + MIR3 SINE MIR 87 196 -12 21 57 0 0 chr17 39130817 39130852 -50373701 + AT_rich Low_complexity Low_complexity 1 35 0 360 133 0 0 chr17 39131385 39131445 -50373108 + (TG)n Simple_repeat Simple_repeat 2 61 0 873 140 0 22 chr17 39131948 39132084 -50372469 + FLAM_C SINE Alu 1 133 0 761 169 7 35 chr17 39132539 39132681 -50371872 + AluSg/x SINE Alu 173 310 0 294 275 83 50 chr17 39134213 39134333 -50370220 + MIR SINE MIR 18 141 -67 1597 170 90 3 chr17 39134344 39134632 -50369921 + AluSq SINE Alu 1 313 0 838 183 6 28 chr17 39134646 39134826 -50369727 + MER5B DNA MER1_type 3 178 0 574 284 13 5 chr17 39136820 39137037 -50367516 - MIR SINE MIR -7 255 37 1658 164 49 0 chr17 39137180 39137467 -50367086 - AluJo SINE Alu -9 303 3 241 305 3 0 chr17 39137590 39137664 -50366889 + MIR SINE MIR 58 134 -74 373 295 16 38 chr17 39138642 39138825 -50365728 + GA-rich Low_complexity Low_complexity 1 179 0 419 254 35 9 chr17 39139310 39139424 -50365129 - MIR3 SINE MIR -28 180 64 500 259 35 18 chr17 39139615 39139806 -50364747 - MIR SINE MIR -51 157 19 206 157 43 14 chr17 39140910 39140980 -50363573 + GA-rich Low_complexity Low_complexity 2 73 0 21 0 0 0 chr17 39141513 39141534 -50363019 + AT_rich Low_complexity Low_complexity 1 21 0 333 155 0 0 chr17 39142053 39142111 -50362442 + (TG)n Simple_repeat Simple_repeat 1 58 0 238 321 37 0 chr17 39142847 39142928 -50361625 - MIR3 SINE MIR -7 201 118 3961 54 2 0 chr17 39143278 39143763 -50360790 - L1PA7 LINE L1 -1 6153 5668 195 42 0 0 chr17 39143996 39144020 -50360533 + (TTTTC)n Simple_repeat Simple_repeat 4 27 0 757 71 0 0 chr17 39144050 39144149 -50360404 - L1PA5 LINE L1 0 6154 6056 506 232 66 33 chr17 39144227 39144378 -50360175 - MIR SINE MIR -75 187 32 343 293 20 10 chr17 39144416 39144515 -50360038 + L2 LINE L2 3192 3291 -22 2089 102 0 10 chr17 39144534 39144828 -50359725 + AluSx SINE Alu 1 291 -21 670 157 0 41 chr17 39144959 39145080 -50359473 - FLAM_C SINE Alu -16 127 12 2234 101 0 0 chr17 39145425 39145722 -50358831 - AluSx SINE Alu -15 297 1 295 215 0 15 chr17 39145734 39145799 -50358754 - L2 LINE L2 -20 3252 3189 252 0 0 0 chr17 39146830 39146858 -50357695 + (TG)n Simple_repeat Simple_repeat 2 29 0 208 250 28 42 chr17 39147211 39147283 -50357270 + MIR SINE MIR 35 105 -157 249 359 8 17 chr17 39147381 39147498 -50357055 + L2 LINE L2 3081 3196 -76 1820 171 10 0 chr17 39147532 39147841 -50356712 + AluJo SINE Alu 1 312 0 180 200 0 0 chr17 39147933 39147973 -50356580 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 324 0 0 0 chr17 39148010 39148046 -50356507 + (CA)n Simple_repeat Simple_repeat 2 37 0 849 206 57 5 chr17 39148655 39148864 -50355689 - MIR SINE MIR -20 242 23 1756 152 13 3 chr17 39150049 39150352 -50354201 - L1MB3 LINE L1 0 6183 5878 2148 101 0 3 chr17 39150363 39150661 -50353892 - AluSg SINE Alu -13 297 1 1486 113 0 52 chr17 39150909 39151157 -50353396 - AluJb SINE Alu -14 298 64 430 200 110 17 chr17 39151166 39151302 -50353251 - MER20B DNA MER1_type -43 176 29 267 211 18 0 chr17 39151328 39151385 -50353168 + L2 LINE L2 3213 3270 -2 258 297 33 124 chr17 39152169 39152442 -50352111 + L2 LINE L2 2916 3163 -109 213 319 0 66 chr17 39152526 39152617 -50351936 + L2 LINE L2 2995 3079 -193 317 274 171 8 chr17 39152928 39153045 -50351508 + MIR3 SINE MIR 11 146 -62 2276 89 3 0 chr17 39153145 39153449 -50351104 - AluSg SINE Alu -5 305 1 601 336 213 9 chr17 39153466 39153888 -50350665 - L3 LINE CR1 -2 1575 1068 2093 123 3 3 chr17 39153912 39154212 -50350341 - AluSx SINE Alu -12 300 1 2107 118 10 0 chr17 39154268 39154572 -50349981 - AluSx SINE Alu 0 312 6 1068 259 36 121 chr17 39154774 39154884 -50349669 + L1MC4a LINE L1 5254 5372 -796 1525 173 24 30 chr17 39154884 39155179 -50349374 - AluJb SINE Alu -19 293 1 1068 259 36 121 chr17 39155179 39155782 -50348771 + L1MC4a LINE L1 5372 5537 -631 198 0 0 0 chr17 39155929 39155951 -50348602 + (TA)n Simple_repeat Simple_repeat 2 23 0 2086 114 0 3 chr17 39155951 39156248 -50348305 - AluSq SINE Alu -17 296 1 2030 124 7 3 chr17 39156295 39156593 -50347960 - AluSx SINE Alu -13 299 1 782 120 0 0 chr17 39156696 39156804 -50347749 - AluJ SINE Alu -14 298 191 490 175 268 0 chr17 39156804 39156901 -50347652 - AluJ SINE Alu -186 126 4 213 241 0 0 chr17 39156923 39156977 -50347576 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 352 346 66 57 chr17 39157114 39157568 -50346985 + L2 LINE L2 2815 3272 0 291 303 140 11 chr17 39157883 39158061 -50346492 + MIR SINE MIR 43 243 -19 840 249 40 32 chr17 39158582 39158835 -50345718 + MIR SINE MIR 1 255 -7 439 97 43 11 chr17 39159810 39159903 -50344650 + C-rich Low_complexity Low_complexity 2 97 0 327 301 35 9 chr17 39160116 39160229 -50344324 + MER5A DNA MER1_type 44 159 -30 1970 110 36 29 chr17 39160229 39160596 -50343957 - AluSg SINE Alu 0 369 1 358 271 101 8 chr17 39160644 39160773 -50343780 + MIR SINE MIR 46 186 -76 354 231 110 0 chr17 39161379 39161470 -50343083 - MIR SINE MIR -111 151 51 2108 94 31 0 chr17 39161547 39161834 -50342719 - AluSx SINE Alu -16 296 1 21 0 0 0 chr17 39161834 39161855 -50342698 + AT_rich Low_complexity Low_complexity 1 21 0 251 182 121 0 chr17 39161906 39161972 -50342581 + MLT1K LTR MaLR 1 74 -514 242 91 0 0 chr17 39161993 39162026 -50342527 - U2 snRNA snRNA -155 33 1 580 259 100 6 chr17 39162313 39162483 -50342070 + MLT1K LTR MaLR 378 563 -25 298 292 31 46 chr17 39162640 39162770 -50341783 + MIR SINE MIR 20 147 -61 4161 136 77 8 chr17 39162770 39163431 -50341122 + MER39 LTR ERV1 1 707 0 348 183 0 0 chr17 39163639 39163732 -50340821 + (CCAA)n Simple_repeat Simple_repeat 2 94 0 234 310 50 30 chr17 39163804 39163904 -50340649 - L2 LINE L2 -229 3043 2942 221 305 29 67 chr17 39165234 39165339 -50339214 - MIR SINE MIR -72 190 90 2187 117 0 13 chr17 39165416 39165732 -50338821 + AluSx SINE Alu 1 312 0 366 220 110 0 chr17 39165848 39165939 -50338614 + MIR SINE MIR 51 151 -111 248 204 20 0 chr17 39166526 39166575 -50337978 + MIR SINE MIR 97 146 -62 228 384 139 19 chr17 39167499 39167757 -50336796 + L2 LINE L2 2966 3254 -18 222 91 0 0 chr17 39168792 39168825 -50335728 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 220 296 12 0 chr17 39169512 39169593 -50334960 + G-rich Low_complexity Low_complexity 1 82 0 25 0 0 0 chr17 39169917 39169942 -50334611 + AT_rich Low_complexity Low_complexity 1 25 0 300 275 117 8 chr17 39171056 39171176 -50333377 + MIR SINE MIR 16 148 -60 214 231 123 15 chr17 39172345 39172410 -50332143 + MIR SINE MIR 10 81 -181 1819 148 0 0 chr17 39172422 39172858 -50331695 - AluSx SINE Alu 0 470 35 325 239 112 37 chr17 39173697 39173831 -50330722 + MIR3 SINE MIR 22 165 -43 303 242 16 89 chr17 39174028 39174152 -50330401 + MIR SINE MIR 120 234 -28 265 255 69 39 chr17 39174127 39174229 -50330324 - MIR SINE MIR -81 181 77 * 311 293 104 52 chr17 39175103 39175155 -50329398 - L1MC4a LINE L1 -1635 6173 6125 2157 103 3 3 chr17 39175155 39175456 -50329097 + AluSx SINE Alu 1 301 -11 2179 109 0 0 chr17 39175458 39175760 -50328793 + AluSx SINE Alu 1 302 -10 311 293 104 52 chr17 39175760 39176011 -50328542 - L1MC4a LINE L1 -1683 6125 5851 369 269 47 40 chr17 39176094 39176243 -50328310 + MIR SINE MIR 28 177 -85 2237 98 3 0 chr17 39176273 39176570 -50327983 + AluSp SINE Alu 1 298 -15 1193 240 26 8 chr17 39177712 39178070 -50326483 - L1 LINE L1 -1734 4412 4060 533 261 0 8 chr17 39178073 39178203 -50326350 - MIR SINE MIR -114 148 20 793 291 5 5 chr17 39178584 39178783 -50325770 + MIR SINE MIR 11 209 -53 342 280 106 8 chr17 39178957 39179089 -50325464 + MIR SINE MIR 92 236 -26 217 290 237 23 chr17 39179161 39179292 -50325261 - MIR SINE MIR -91 171 13 268 234 0 13 chr17 39179825 39179902 -50324651 + (CA)n Simple_repeat Simple_repeat 2 77 0 330 269 11 29 chr17 39179974 39180149 -50324404 + (CA)n Simple_repeat Simple_repeat 2 173 0 299 303 0 43 chr17 39180390 39180578 -50323975 + (CA)n Simple_repeat Simple_repeat 1 180 0 210 118 0 0 chr17 39180684 39180718 -50323835 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 257 268 14 0 chr17 39181072 39181143 -50323410 - MIR SINE MIR -110 152 81 455 276 66 29 chr17 39181719 39181899 -50322654 - MIR SINE MIR -70 192 9 407 233 209 12 chr17 39182032 39182195 -50322358 + MIR SINE MIR 20 214 -48 366 231 67 164 chr17 39182448 39182643 -50321910 + MER5B DNA MER1_type 1 176 -2 358 255 0 75 chr17 39182658 39182722 -50321831 + MER5A DNA MER1_type 12 79 -110 2398 84 0 0 chr17 39182722 39183031 -50321522 + AluY SINE Alu 1 309 -2 2026 99 50 0 chr17 39183035 39183318 -50321235 + AluSq SINE Alu 3 299 -14 358 255 0 75 chr17 39183318 39183354 -50321199 + MER5A DNA MER1_type 82 109 -80 212 242 30 91 chr17 39183948 39184037 -50320516 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 -78 1366 161 173 0 chr17 39184037 39184291 -50320262 - AluJo SINE Alu -4 298 1 212 242 30 91 chr17 39184291 39184366 -50320187 + (TCTCTG)n Simple_repeat Simple_repeat 78 156 0 257 50 0 25 chr17 39184381 39184421 -50320132 + (TTTTA)n Simple_repeat Simple_repeat 1 39 0 660 100 8 10 chr17 39184421 39184543 -50320010 - L1PA4 LINE L1 -24 6131 6024 243 262 262 8 chr17 39184767 39184889 -50319664 - MIR SINE MIR -79 183 31 2122 117 0 22 chr17 39185135 39185452 -50319101 - AluSx SINE Alu 0 312 3 447 361 80 24 chr17 39185598 39186084 -50318469 - L2 LINE L2 -20 3252 2739 1976 130 7 7 chr17 39186109 39186409 -50318144 + AluSx SINE Alu 1 300 -12 450 275 29 41 chr17 39186427 39186598 -50317955 - MLT1J2 LTR MaLR 0 450 282 1661 176 11 45 chr17 39186601 39186958 -50317595 - MLT1A2 LTR MaLR -1 373 29 509 323 24 0 chr17 39187061 39187228 -50317325 - MLT1J2 LTR MaLR -213 237 67 407 316 87 41 chr17 39187603 39187821 -50316732 + MIR SINE MIR 35 262 0 545 293 56 23 chr17 39187824 39188039 -50316514 + MIR SINE MIR 41 262 0 183 333 0 0 chr17 39188108 39188159 -50316394 + L2 LINE L2 3263 3313 0 564 269 98 43 chr17 39188254 39188488 -50316065 + MIR SINE MIR 2 248 -14 473 221 245 6 chr17 39188982 39189145 -50315408 - MIR SINE MIR -38 224 23 256 279 45 27 chr17 39190153 39190264 -50314289 + MIR SINE MIR 68 180 -82 411 296 25 70 chr17 39190866 39191065 -50313488 - MIR SINE MIR -71 191 2 2326 225 33 14 chr17 39191396 39191907 -50312646 - MLT1F LTR MaLR 0 542 22 373 264 70 12 chr17 39191948 39192122 -50312431 + L1ME3A LINE L1 5928 6122 -48 1981 132 20 0 chr17 39192202 39192498 -50312055 - AluSx SINE Alu -10 302 1 251 361 0 10 chr17 39192517 39192614 -50311939 - MIR SINE MIR -77 131 36 848 274 239 3 chr17 39193050 39193418 -50311135 - L2 LINE L2 -5 3308 2854 186 343 14 14 chr17 39193418 39193491 -50311062 + MIR SINE MIR 23 95 -167 1771 163 3 0 chr17 39193546 39193835 -50310718 - AluJb SINE Alu -22 290 1 1804 133 30 30 chr17 39193835 39194135 -50310418 - AluJb SINE Alu -12 300 1 376 222 12 12 chr17 39194217 39194298 -50310255 + L2 LINE L2 3186 3266 -47 398 199 189 60 chr17 39194411 39194612 -50309941 - L2 LINE L2 -213 3059 2833 592 160 8 8 chr17 39194744 39194869 -50309684 + GA-rich Low_complexity Low_complexity 1 125 0 420 139 178 30 chr17 39195826 39195927 -50308626 - FLAM_A SINE Alu -7 135 20 368 211 0 13 chr17 39195929 39196005 -50308548 + MIR SINE MIR 79 153 -55 245 275 306 16 chr17 39196335 39196528 -50308025 + MIR SINE MIR 13 261 -1 387 269 56 9 chr17 39197271 39197379 -50307174 - MIR SINE MIR -118 144 32 455 177 71 9 chr17 39197524 39197651 -50306902 - MIR SINE MIR -61 147 29 317 298 82 28 chr17 39198152 39198407 -50306146 + L2 LINE L2 2470 2738 -576 1952 154 0 6 chr17 39198419 39198731 -50305822 + AluSx SINE Alu 1 310 -2 401 274 63 89 chr17 39198744 39199127 -50305426 + L2 LINE L2 2825 3197 -75 227 145 16 65 chr17 39199725 39199787 -50304766 + C-rich Low_complexity Low_complexity 2 60 0 681 239 13 80 chr17 39200552 39200791 -50303762 - MIR SINE MIR -33 229 7 901 238 10 5 chr17 39201615 39201821 -50302732 - MIR SINE MIR -21 241 35 932 205 68 19 chr17 39201824 39202029 -50302524 - MIR SINE MIR -11 251 37 186 43 0 0 chr17 39202204 39202227 -50302326 + (CAGG)n Simple_repeat Simple_repeat 3 25 0 240 382 26 49 chr17 39202695 39202999 -50301554 + L2 LINE L2 2564 2860 -454 351 197 0 15 chr17 39203023 39203089 -50301464 - MIR SINE MIR -1 261 197 1535 154 4 0 chr17 39203089 39203335 -50301218 - Tigger3(Golem) DNA MER2_type 0 3038 2792 2131 118 0 16 chr17 39203335 39203671 -50300882 + AluSc SINE Alu 1 309 0 186 189 0 0 chr17 39203671 39203708 -50300845 + GA-rich Low_complexity Low_complexity 1 37 0 273 281 79 12 chr17 39203739 39203903 -50300650 + L2 LINE L2 2862 3036 -236 240 204 20 0 chr17 39204797 39204866 -50299687 + C-rich Low_complexity Low_complexity 1 70 0 2458 167 42 56 chr17 39204888 39204933 -50299620 - L1MA9 LINE L1 -5 6307 6263 2153 110 10 0 chr17 39204933 39205232 -50299321 + AluSx SINE Alu 1 302 -10 2458 167 42 56 chr17 39205232 39205756 -50298797 - L1MA9 LINE L1 -49 6263 5746 208 286 0 0 chr17 39205801 39205857 -50298696 + L2 LINE L2 3217 3272 0 182 244 24 0 chr17 39206123 39206164 -50298389 - MIR SINE MIR -6 256 215 1177 35 35 11 chr17 39206329 39206503 -50298050 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 6349 70 9 6 chr17 39206534 39207407 -50297146 - L1PA8A LINE L1 -2 6129 5254 309 326 136 0 chr17 39208042 39208174 -50296379 - MIR SINE MIR -82 180 31 366 298 18 9 chr17 39208466 39208580 -50295973 - MIR SINE MIR -76 132 18 1839 156 10 3 chr17 39208664 39208966 -50295587 - AluJo SINE Alu -8 304 1 1285 199 52 19 chr17 39209711 39210018 -50294535 + MER58B DNA MER1_type 1 317 -24 1071 107 13 0 chr17 39210019 39210169 -50294384 - AluSg/x SINE Alu -7 305 154 839 207 88 51 chr17 39210274 39210491 -50294062 + AluJo SINE Alu 85 309 -3 258 304 22 43 chr17 39210946 39211084 -50293469 - MER5B DNA MER1_type -35 143 9 2075 94 37 7 chr17 39211107 39211406 -50293147 + AluSx SINE Alu 1 308 -4 254 326 0 0 chr17 39213251 39213340 -50291213 + GA-rich Low_complexity Low_complexity 1 89 0 245 282 73 18 chr17 39214226 39214336 -50290217 + L2 LINE L2 2946 3061 -211 654 247 79 71 chr17 39214427 39214726 -50289827 - L2 LINE L2 -5 3308 3035 817 25 33 8 chr17 39214936 39215057 -50289496 + (TTTC)n Simple_repeat Simple_repeat 3 126 0 865 174 14 0 chr17 39215058 39215202 -50289351 - FRAM SINE Alu -30 146 1 338 288 91 25 chr17 39215325 39215505 -50289048 - MIR SINE MIR 0 262 61 2066 100 0 30 chr17 39215505 39215806 -50288747 - AluSq SINE Alu -21 292 1 338 288 91 25 chr17 39215806 39215863 -50288690 - MIR SINE MIR -201 61 9 185 244 22 0 chr17 39217112 39217157 -50287396 + L2 LINE L2 3252 3297 -16 2342 94 0 0 chr17 39217279 39217586 -50286967 - AluSx SINE Alu -5 307 1 282 303 67 51 chr17 39217684 39217879 -50286674 - L2 LINE L2 -338 2976 2779 888 266 44 62 chr17 39218108 39218495 -50286058 - MLT1I LTR MaLR 0 409 30 613 121 0 0 chr17 39218597 39218680 -50285873 + FRAM SINE Alu 31 113 -63 2241 92 3 13 chr17 39218955 39219261 -50285292 + AluSx SINE Alu 1 303 -9 385 276 22 36 chr17 39219821 39219873 -50284680 + GA-rich Low_complexity Low_complexity 1 52 -1255 1863 127 3 54 chr17 39219873 39220001 -50284552 + AluJo SINE Alu 1 134 -168 1902 138 0 46 chr17 39220001 39220191 -50284362 - AluSx SINE Alu 0 312 115 267 103 0 0 chr17 39220191 39220230 -50284323 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2119 88 0 3 chr17 39220230 39220513 -50284040 - AluSg SINE Alu -28 282 1 1902 138 0 46 chr17 39220513 39220648 -50283905 - AluSx SINE Alu -195 117 1 1863 127 3 54 chr17 39220648 39220834 -50283719 + AluJo SINE Alu 134 299 -3 385 276 22 36 chr17 39220834 39221147 -50283406 + GA-rich Low_complexity Low_complexity 52 1307 0 405 283 29 51 chr17 39221915 39222092 -50282461 + MIR SINE MIR 32 207 -55 2332 75 3 39 chr17 39222226 39222532 -50282021 - AluSx SINE Alu -17 295 1 217 312 83 18 chr17 39222733 39222842 -50281711 + L2 LINE L2 3153 3268 -4 596 260 69 76 chr17 39223051 39223128 -50281425 + L2 LINE L2 2639 2715 -598 2083 139 0 3 chr17 39223128 39223429 -50281124 + AluSx SINE Alu 1 300 -12 596 260 69 76 chr17 39223429 39223774 -50280779 + L2 LINE L2 2715 3059 -254 841 317 42 8 chr17 39223825 39224178 -50280375 - L1MEd LINE L1 -5305 814 450 2359 109 0 6 chr17 39224191 39224503 -50280050 - AluSg SINE Alu 0 310 1 2190 104 7 0 chr17 39224530 39224860 -50279693 - AluSg SINE Alu 0 310 1 562 176 29 0 chr17 39224879 39224981 -50279572 - AluJo/FRAM SINE Alu -20 292 188 582 143 0 184 chr17 39224981 39225128 -50279425 + FLAM_C SINE Alu 2 121 -22 373 165 4 0 chr17 39225154 39225247 -50279306 - FLAM_A SINE Alu -68 64 2 562 235 12 37 chr17 39225264 39225426 -50279127 - L1MEd LINE L1 -5959 160 3 638 269 56 15 chr17 39225450 39225647 -50278906 + L2 LINE L2 3108 3312 -1 549 241 170 31 chr17 39225626 39225850 -50278703 + MIR SINE MIR 7 261 -1 * 473 197 103 54 chr17 39226216 39226330 -50278223 + MIR SINE MIR 50 180 -82 1965 164 3 3 chr17 39226330 39226634 -50277919 - AluSx SINE Alu -8 304 1 473 197 103 54 chr17 39226634 39226722 -50277831 + MIR SINE MIR 180 262 0 389 192 14 0 chr17 39226725 39226798 -50277755 + L2 LINE L2 3225 3298 -15 563 92 11 0 chr17 39226800 39226887 -50277666 + (TGGA)n Simple_repeat Simple_repeat 1 88 0 204 224 20 0 chr17 39226990 39227039 -50277514 - MIR3 SINE MIR -2 206 157 441 314 19 19 chr17 39227177 39227336 -50277217 - MIR3 SINE MIR -46 162 4 1837 174 0 0 chr17 39227386 39227689 -50276864 - AluJo SINE Alu 0 303 1 30 0 0 0 chr17 39227689 39227719 -50276834 + AT_rich Low_complexity Low_complexity 1 30 0 1777 159 0 40 chr17 39227867 39228168 -50276385 - AluJo SINE Alu -23 289 1 402 261 154 23 chr17 39228237 39228367 -50276186 - L1MC4 LINE L1 0 8042 7896 333 319 45 37 chr17 39228422 39228646 -50275907 - L1ME3A LINE L1 -224 5946 5831 405 266 0 0 chr17 39228705 39228799 -50275754 - L1ME3A LINE L1 -462 5708 5615 807 244 157 38 chr17 39228801 39229234 -50275319 - MLT1G LTR MaLR -2 585 108 277 247 34 111 chr17 39229284 39229362 -50275191 - L1ME3A LINE L1 -507 5614 5532 2032 119 0 40 chr17 39229362 39229665 -50274888 - AluSx SINE Alu -21 291 1 277 247 34 111 chr17 39229665 39229796 -50274757 - L1ME3A LINE L1 -589 5532 5426 1939 168 7 0 chr17 39229828 39230132 -50274421 - AluJo SINE Alu -6 306 1 451 286 63 11 chr17 39230132 39230307 -50274246 - L1ME3A LINE L1 -720 5442 5259 190 257 90 56 chr17 39230782 39230926 -50273627 + L2 LINE L2 2916 3064 -208 818 196 37 0 chr17 39231182 39231345 -50273208 - MER3 DNA MER1_type -78 131 10 411 134 247 21 chr17 39231345 39231442 -50273111 + AluJb SINE Alu 2 120 -192 369 186 29 0 chr17 39231603 39231673 -50272880 + MIR SINE MIR 56 127 -81 227 196 0 36 chr17 39231753 39231809 -50272744 + G-rich Low_complexity Low_complexity 2 55 0 299 306 139 7 chr17 39232383 39232527 -50272026 + MIR SINE MIR 90 252 -10 714 72 0 0 chr17 39233775 39233872 -50270681 + (TTCA)n Simple_repeat Simple_repeat 1 97 0 718 145 21 41 chr17 39233935 39234080 -50270473 - FLAM_C SINE Alu 0 143 2 250 250 0 0 chr17 39234099 39234167 -50270386 - MIR SINE MIR -131 131 64 416 306 0 0 chr17 39234503 39234611 -50269942 - MER5B DNA MER1_type -69 109 2 361 221 84 0 chr17 39235434 39235529 -50269024 - MER5A DNA MER1_type -83 106 4 395 266 18 25 chr17 39236026 39236168 -50268385 + MIR3 SINE MIR 45 185 -47 465 301 49 12 chr17 39236264 39236427 -50268126 + MIR SINE MIR 56 224 -38 336 48 0 0 chr17 39236427 39236469 -50268084 + (CA)n Simple_repeat Simple_repeat 1 42 0 289 312 152 0 chr17 39237137 39237275 -50267278 + MIR SINE MIR 64 222 -40 2039 142 20 0 chr17 39237280 39237582 -50266971 + AluSq SINE Alu 1 308 -5 300 320 31 23 chr17 39237958 39238086 -50266467 + L3b LINE CR1 1267 1395 -188 1569 188 0 11 chr17 39238846 39239118 -50265435 - AluJb SINE Alu -6 306 38 269 221 0 29 chr17 39239365 39239433 -50265120 + (CA)n Simple_repeat Simple_repeat 1 66 0 687 195 92 18 chr17 39241434 39241598 -50262955 + MER45A DNA AcHobo 1 176 -2 186 267 189 0 chr17 39241750 39241840 -50262713 + MIR3 SINE MIR 78 184 -24 752 204 6 0 chr17 39241903 39242079 -50262474 + (CA)n Simple_repeat Simple_repeat 1 177 0 208 106 0 43 chr17 39243105 39243152 -50261401 + (CA)n Simple_repeat Simple_repeat 1 45 0 252 274 141 15 chr17 39245278 39245413 -50259140 - MIR SINE MIR -80 182 31 438 258 172 19 chr17 39246560 39246879 -50257674 - L2 LINE L2 -225 3088 2712 472 227 42 0 chr17 39246893 39247012 -50257541 + MIR SINE MIR 83 206 -56 277 267 58 23 chr17 39247148 39247234 -50257319 - L2 LINE L2 -6 3307 3219 255 232 0 0 chr17 39247989 39248045 -50256508 - L2 LINE L2 -1 3271 3216 373 267 208 28 chr17 39248541 39248720 -50255833 - MIR SINE MIR -57 205 6 2188 119 30 0 chr17 39248725 39249028 -50255525 - AluSx SINE Alu 0 312 1 345 231 127 15 chr17 39250210 39250344 -50254209 + MIR SINE MIR 70 218 -44 235 88 15 88 chr17 39250611 39250679 -50253874 + (CGAGG)n Simple_repeat Simple_repeat 4 66 0 392 275 90 25 chr17 39251070 39251270 -50253283 - MIR SINE MIR -12 250 38 662 267 17 61 chr17 39251937 39252136 -50252417 + L1M4 LINE L1 2685 2863 -3283 2187 87 7 0 chr17 39252136 39252442 -50252111 + AluSc SINE Alu 1 308 0 662 267 17 61 chr17 39252442 39252600 -50251953 + L1M4 LINE L1 2863 3027 -3119 1238 149 5 23 chr17 39252695 39252909 -50251644 + MER2 DNA MER2_type 1 210 -135 330 103 29 73 chr17 39252921 39252989 -50251564 - Alu SINE Alu 0 301 237 270 0 0 0 chr17 39253441 39253471 -50251082 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 569 241 14 24 chr17 39253821 39253991 -50250562 + MIR SINE MIR 6 172 -67 192 77 0 0 chr17 39254025 39254051 -50250502 + (TG)n Simple_repeat Simple_repeat 1 26 0 285 262 0 0 chr17 39254386 39254447 -50250106 + L2 LINE L2 3200 3260 -12 1894 159 14 7 chr17 39254447 39254743 -50249810 + AluJo SINE Alu 1 298 -14 393 297 179 20 chr17 39254823 39255069 -50249484 - L1ME4a LINE L1 -28 6093 5809 385 282 43 54 chr17 39255084 39255361 -50249192 + L1ME3A LINE L1 2675 2948 -3198 2083 138 0 0 chr17 39255361 39255695 -50248858 + AluSx SINE Alu 1 334 0 5030 131 84 104 chr17 39255700 39255744 -50248809 + L1MC3 LINE L1 6378 6421 -1364 531 139 0 0 chr17 39255744 39255830 -50248723 - L1PA13 LINE L1 -3 6160 6075 5030 131 84 104 chr17 39255830 39256506 -50248047 + L1MC3 LINE L1 6421 7109 -676 278 333 0 0 chr17 39256506 39256593 -50247960 + MLT1F1 LTR MaLR 39 125 -442 2312 98 3 0 chr17 39256596 39256891 -50247662 + AluSx SINE Alu 5 300 -12 5030 131 84 104 chr17 39256891 39257080 -50247473 + L1MC3 LINE L1 7111 7302 -483 2175 75 3 39 chr17 39257080 39257397 -50247156 + AluSx SINE Alu 12 318 0 5030 131 84 104 chr17 39257397 39257615 -50246938 + L1MC3 LINE L1 7302 7574 -211 1305 140 12 66 chr17 39257616 39257873 -50246680 - L1MA4 LINE L1 -437 5863 5621 26 0 0 0 chr17 39257903 39257929 -50246624 + AT_rich Low_complexity Low_complexity 1 26 0 1036 156 13 34 chr17 39257936 39258015 -50246538 + L1MC3 LINE L1 7552 7631 -154 1807 128 68 0 chr17 39258015 39258266 -50246287 + AluJb SINE Alu 1 268 -44 306 0 0 0 chr17 39258266 39258300 -50246253 + (TAA)n Simple_repeat Simple_repeat 1 34 0 1036 156 13 34 chr17 39258300 39258456 -50246097 + L1MC3 LINE L1 7629 7783 -2 256 225 79 11 chr17 39258446 39258535 -50246018 + L1ME3A LINE L1 2926 3020 -3126 * 1061 278 71 10 chr17 39258540 39258849 -50245704 + MLT1I LTR MaLR 1 328 -81 414 249 96 39 chr17 39259121 39259507 -50245046 + L1ME3A LINE L1 4984 5391 -755 756 234 11 21 chr17 39259563 39259751 -50244802 + AluJb SINE Alu 121 306 -6 507 143 0 0 chr17 39259831 39259915 -50244638 + AluJ/FRAM SINE Alu 229 312 0 429 318 63 31 chr17 39259920 39260238 -50244315 + L1ME3A LINE L1 5610 5937 -233 249 81 27 0 chr17 39260464 39260501 -50244052 - LTR33A LTR ERVL 0 523 486 * 447 233 61 33 chr17 39260471 39260651 -50243902 - LTR41 LTR ERVL -6 767 583 593 228 54 54 chr17 39260891 39261075 -50243478 - LTR41 LTR ERVL -589 184 1 2133 141 7 0 chr17 39261242 39261539 -50243014 + AluSx SINE Alu 1 299 -13 361 297 29 14 chr17 39261712 39261850 -50242703 + L1M4 LINE L1 2148 2287 -3859 3220 134 29 20 chr17 39262162 39262264 -50242289 + L1MB3 LINE L1 5587 5687 -496 2261 124 0 0 chr17 39262264 39262571 -50241982 + AluSx SINE Alu 1 307 -5 3220 134 29 20 chr17 39262571 39263059 -50241494 + L1MB3 LINE L1 5687 6182 -1 2266 120 10 0 chr17 39263069 39263378 -50241175 + AluSx SINE Alu 1 312 0 349 254 107 8 chr17 39263720 39263842 -50240711 + MIR SINE MIR 20 153 -109 1280 175 35 4 chr17 39264049 39264306 -50240247 - L1MD2 LINE L1 0 6359 6095 775 160 0 0 chr17 39264492 39264617 -50239936 + FLAM_C SINE Alu 1 125 -8 249 33 0 0 chr17 39264617 39264647 -50239906 + (GA)n Simple_repeat Simple_repeat 2 31 0 281 306 88 31 chr17 39265246 39265406 -50239147 + MIR SINE MIR 80 248 -14 606 97 26 0 chr17 39265719 39265832 -50238721 + CT-rich Low_complexity Low_complexity 1 116 0 391 307 0 0 chr17 39267422 39267523 -50237030 + MIR SINE MIR 111 211 -51 405 301 104 11 chr17 39267893 39268076 -50236477 + L2 LINE L2 2605 2804 -510 1709 188 17 11 chr17 39268583 39268870 -50235683 + AluJb SINE Alu 2 290 -22 1816 165 13 25 chr17 39268933 39269318 -50235235 + AluJo SINE Alu 1 381 0 346 292 102 42 chr17 39269368 39269652 -50234901 - MLT1K LTR MaLR 0 588 288 1409 236 107 40 chr17 39269656 39270232 -50234321 + MLT1G LTR MaLR 1 576 -14 1071 282 40 21 chr17 39270442 39270595 -50233958 - L1ME4a LINE L1 -126 5995 5846 2032 139 0 20 chr17 39270595 39270890 -50233663 - AluJo SINE Alu -12 300 12 1071 282 40 21 chr17 39270890 39271165 -50233388 - L1ME4a LINE L1 -275 5846 5559 798 156 11 15 chr17 39271165 39271431 -50233122 + CT-rich Low_complexity Low_complexity 1 264 0 1963 172 0 3 chr17 39271436 39271733 -50232820 - AluJb SINE Alu -16 296 1 2983 3 0 0 chr17 39271748 39272059 -50232494 - AluYa5 SINE Alu 0 311 1 461 291 123 19 chr17 39272086 39272347 -50232206 - L1ME4a LINE L1 -2266 5542 5255 2387 109 0 0 chr17 39272412 39272715 -50231838 - AluSg SINE Alu -7 303 1 1400 219 58 26 chr17 39273315 39273694 -50230859 + LTR16A1 LTR ERVL 65 455 -2 576 208 71 38 chr17 39274166 39274349 -50230204 + MLT1K LTR MaLR 393 581 -7 302 274 142 18 chr17 39274796 39274909 -50229644 + MIR SINE MIR 20 146 -116 334 335 91 23 chr17 39275544 39275765 -50228788 - MIR SINE MIR -6 256 21 596 306 42 14 chr17 39276143 39276389 -50228164 + MIR SINE MIR 11 259 -3 1815 159 3 32 chr17 39276394 39276708 -50227845 + AluJo SINE Alu 1 305 -7 1051 205 40 9 chr17 39276784 39277008 -50227545 - MIR SINE MIR 0 262 32 2114 118 0 21 chr17 39277316 39277605 -50226948 - AluSq SINE Alu -29 284 2 609 212 8 30 chr17 39277612 39277744 -50226809 - FLAM_C SINE Alu -4 129 1 183 300 0 17 chr17 39277745 39277805 -50226748 - L2 LINE L2 -349 2964 2906 548 303 37 6 chr17 39278452 39278642 -50225911 + MIR SINE MIR 9 202 -60 235 304 0 0 chr17 39279151 39279220 -50225333 + MIR SINE MIR 63 131 -77 326 23 23 0 chr17 39279310 39279353 -50225200 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 185 341 23 0 chr17 39279392 39279480 -50225073 + MIR3 SINE MIR 109 198 -10 241 301 124 13 chr17 39280187 39280340 -50224213 + MIR SINE MIR 89 258 -4 183 267 0 0 chr17 39281057 39281102 -50223451 + MIR SINE MIR 108 152 -56 1044 88 0 29 chr17 39281104 39281241 -50223312 + AluSq/x SINE Alu 1 133 -179 264 167 0 0 chr17 39281358 39281406 -50223147 + CT-rich Low_complexity Low_complexity 3 50 0 478 246 43 22 chr17 39281809 39281947 -50222606 - MLT1J1 LTR MaLR -239 207 67 5606 99 4 2 chr17 39281947 39282329 -50222224 - L1PA15 LINE L1 -2 6163 5783 1866 109 16 8 chr17 39282329 39282586 -50221967 - AluSq SINE Alu -54 259 1 5606 99 4 2 chr17 39282586 39283034 -50221519 - L1PA15 LINE L1 -382 5783 5332 184 330 140 10 chr17 39283275 39283375 -50221178 + L2 LINE L2 2924 3036 -277 847 173 0 0 chr17 39283423 39283556 -50220997 + AluJo SINE Alu 1 133 -179 381 260 39 65 chr17 39283560 39283714 -50220839 - MIR3 SINE MIR -48 160 11 339 323 0 32 chr17 39283740 39283864 -50220689 + MIR3 SINE MIR 59 178 -30 387 246 48 32 chr17 39284030 39284156 -50220397 - MIR SINE MIR -37 225 98 309 366 69 27 chr17 39284159 39284421 -50220132 + L3 LINE CR1 1276 1548 -29 695 263 48 24 chr17 39284421 39284672 -50219881 - MER113 DNA MER1_type? -50 471 215 303 207 78 35 chr17 39284681 39284797 -50219756 - MER113 DNA MER1_type? -275 246 126 4403 141 24 41 chr17 39284807 39285710 -50218843 + L1MC2 LINE L1 5186 6073 -271 1662 263 65 4 chr17 39285710 39286190 -50218363 + L1ME3 LINE L1 5632 6140 -22 307 247 47 0 chr17 39286832 39286917 -50217636 - L3 LINE CR1 -58 1519 1431 983 196 12 0 chr17 39287209 39287377 -50217176 + AluJo SINE Alu 137 306 -6 276 87 0 87 chr17 39287379 39287448 -50217105 + (GGGAA)n Simple_repeat Simple_repeat 2 64 0 183 42 0 0 chr17 39287821 39287845 -50216708 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1071 143 7 0 chr17 39287848 39287995 -50216558 - AluJo/FRAM SINE Alu -31 281 134 2012 127 31 10 chr17 39287995 39288287 -50216266 - AluSx SINE Alu -14 298 1 1920 154 0 16 chr17 39288287 39288592 -50215961 - AluJb SINE Alu -12 300 1 380 125 200 67 chr17 39288602 39288722 -50215831 - MIR SINE MIR -107 155 20 314 289 195 8 chr17 39290092 39290220 -50214333 + MIR3 SINE MIR 20 171 -37 325 303 136 13 chr17 39291133 39291288 -50213265 - MIR SINE MIR 0 262 89 189 311 87 10 chr17 39291386 39291489 -50213064 - MIR SINE MIR -58 150 40 403 255 70 38 chr17 39292882 39293039 -50211514 - MIR SINE MIR -13 249 88 346 345 28 14 chr17 39293098 39293243 -50211310 + MIR3 SINE MIR 3 149 -59 2280 89 4 0 chr17 39293463 39293782 -50210771 + AluSx SINE Alu 1 320 0 2335 119 3 0 chr17 39293861 39294171 -50210382 + AluSx SINE Alu 1 311 -1 352 299 28 0 chr17 39294171 39294278 -50210275 + MIR SINE MIR 145 254 -8 3641 166 43 45 chr17 39294845 39294939 -50209614 + L1MB4 LINE L1 5350 5443 -737 1910 115 65 11 chr17 39294939 39295218 -50209335 + AluSx SINE Alu 1 294 -18 3641 166 43 45 chr17 39295218 39295955 -50208598 + L1MB4 LINE L1 5443 6180 0 437 263 6 17 chr17 39296840 39297019 -50207534 + (CA)n Simple_repeat Simple_repeat 1 177 0 432 265 6 17 chr17 39297057 39297238 -50207315 + (CA)n Simple_repeat Simple_repeat 1 179 0 314 276 0 43 chr17 39297163 39297348 -50207205 + (CTCA)n Simple_repeat Simple_repeat 2 178 0 * 433 247 19 13 chr17 39297382 39297540 -50207013 + (CA)n Simple_repeat Simple_repeat 1 159 0 451 282 0 28 chr17 39297563 39297744 -50206809 + (CA)n Simple_repeat Simple_repeat 2 177 0 322 288 0 20 chr17 39297759 39297905 -50206648 + (CA)n Simple_repeat Simple_repeat 1 143 0 349 292 0 32 chr17 39297943 39298128 -50206425 + (CA)n Simple_repeat Simple_repeat 1 179 0 313 343 12 0 chr17 39298204 39298376 -50206177 + (CA)n Simple_repeat Simple_repeat 1 174 0 298 291 13 0 chr17 39298453 39298532 -50206021 - MIR3 SINE MIR -15 193 114 213 307 27 13 chr17 39298651 39298726 -50205827 + MIR SINE MIR 137 212 -50 180 77 0 0 chr17 39299253 39299279 -50205274 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 835 235 18 0 chr17 39299406 39299576 -50204977 - MER63A DNA MER1_type -37 173 1 205 198 11 33 chr17 39299685 39299745 -50204808 + MIR SINE MIR 104 160 -102 481 289 128 13 chr17 39299758 39299823 -50204730 - MER5A DNA MER1_type -9 180 124 1653 177 19 53 chr17 39299823 39300201 -50204352 - MLT1A1 LTR MaLR 0 365 1 481 289 128 13 chr17 39300201 39300291 -50204262 - MER5A DNA MER1_type -65 124 7 2133 123 13 10 chr17 39300980 39301280 -50203273 - AluSx SINE Alu -11 301 1 180 267 0 0 chr17 39301304 39301349 -50203204 + L2 LINE L2 3143 3187 -85 531 90 0 0 chr17 39302253 39302331 -50202222 + (TTCA)n Simple_repeat Simple_repeat 1 78 0 999 267 90 15 chr17 39302331 39302394 -50202159 - L2 LINE L2 -10 3303 3246 1905 185 25 2 chr17 39302394 39302799 -50201754 + L1MB4 LINE L1 5767 6180 0 2160 137 0 3 chr17 39302805 39303118 -50201435 + AluSx SINE Alu 1 312 0 999 267 90 15 chr17 39303118 39303501 -50201052 - L2 LINE L2 -71 3242 2812 2482 103 0 0 chr17 39303931 39304242 -50200311 - AluSx SINE Alu -1 311 1 1246 245 109 17 chr17 39304588 39305366 -50199187 + L2 LINE L2 2457 3313 0 302 180 18 5 chr17 39305472 39305551 -50199002 - MIR SINE MIR -65 143 64 285 281 62 31 chr17 39306340 39306436 -50198117 + MIR SINE MIR 159 257 -5 287 302 12 12 chr17 39306846 39306932 -50197621 - MIR SINE MIR -117 145 60 806 302 0 12 chr17 39307090 39307332 -50197221 - MIR SINE MIR -22 240 2 335 306 98 29 chr17 39310046 39310219 -50194334 - L3 LINE CR1 -24 1553 1369 421 224 15 82 chr17 39310763 39310897 -50193656 - L3 LINE CR1 -207 1370 1246 2413 92 0 13 chr17 39311229 39311543 -50193010 + AluSx SINE Alu 1 310 -2 234 268 31 10 chr17 39311894 39311991 -50192562 + (TG)n Simple_repeat Simple_repeat 1 99 0 289 380 73 27 chr17 39312083 39312233 -50192320 + L2 LINE L2 3107 3263 -9 219 69 0 0 chr17 39312243 39312272 -50192281 + (AACTG)n Simple_repeat Simple_repeat 4 32 0 183 129 0 0 chr17 39312470 39312501 -50192052 + (TG)n Simple_repeat Simple_repeat 1 31 0 1006 229 39 92 chr17 39313603 39314039 -50190514 + L1ME3A LINE L1 5749 6161 -9 2855 187 39 34 chr17 39314206 39314981 -50189572 - L1M4 LINE L1 -2804 3342 2564 342 297 0 20 chr17 39315249 39315350 -50189203 - MIR3 SINE MIR -22 186 88 413 273 19 14 chr17 39315527 39315654 -50188899 + MIR SINE MIR 22 142 -66 474 294 35 25 chr17 39316024 39316221 -50188332 + L1MC5 LINE L1 7715 7913 -48 215 30 0 30 chr17 39316912 39316945 -50187608 + (CA)n Simple_repeat Simple_repeat 1 32 0 302 307 11 6 chr17 39316967 39317143 -50187410 + (CA)n Simple_repeat Simple_repeat 1 177 0 418 194 11 17 chr17 39317182 39317362 -50187191 + (CA)n Simple_repeat Simple_repeat 1 179 0 198 227 0 0 chr17 39317472 39317547 -50187006 + (CA)n Simple_repeat Simple_repeat 1 75 0 366 253 0 0 chr17 39317567 39317741 -50186812 + (CA)n Simple_repeat Simple_repeat 2 175 0 238 253 0 12 chr17 39317755 39317921 -50186632 + (CA)n Simple_repeat Simple_repeat 2 165 0 223 242 0 0 chr17 39317970 39318032 -50186521 + (CA)n Simple_repeat Simple_repeat 2 63 0 203 270 79 11 chr17 39318108 39318197 -50186356 + MIR SINE MIR 95 189 -73 218 268 73 0 chr17 39318604 39318686 -50185867 - MIR SINE MIR -115 147 60 247 265 0 0 chr17 39319078 39319127 -50185426 + polypyrimidine Low_complexity Low_complexity 1 49 0 263 224 188 0 chr17 39319294 39319379 -50185174 + MIR SINE MIR 119 219 -43 2187 129 0 10 chr17 39319388 39319699 -50184854 + AluSx SINE Alu 1 308 -4 311 149 52 3 chr17 39319719 39319789 -50184764 + AluJ/FLAM SINE Alu 1 58 -244 971 171 6 0 chr17 39319789 39319947 -50184606 - AluJo SINE Alu -139 173 15 2676 133 50 26 chr17 39320052 39320549 -50184004 - L1MA6 LINE L1 -188 6112 5604 798 188 0 0 chr17 39320570 39320735 -50183818 + CT-rich Low_complexity Low_complexity 4 168 0 731 212 0 0 chr17 39320737 39320869 -50183684 - FRAM SINE Alu -13 163 32 1357 187 33 0 chr17 39320869 39321142 -50183411 - L1MA6 LINE L1 -847 5299 5018 399 250 73 8 chr17 39321145 39321269 -50183284 - MIR3 SINE MIR -14 194 63 1784 213 24 37 chr17 39321396 39321861 -50182692 - MLT1C LTR MaLR -1 466 8 1613 168 44 47 chr17 39322528 39322826 -50181727 + AluJo SINE Alu 1 297 -15 2087 102 0 71 chr17 39322828 39323137 -50181416 + AluSx SINE Alu 1 300 -12 234 57 29 0 chr17 39323137 39323172 -50181381 + (TAAAA)n Simple_repeat Simple_repeat 5 75 0 2087 102 0 71 chr17 39323172 39323185 -50181368 + AluSx SINE Alu 300 312 0 794 153 0 0 chr17 39324116 39324240 -50180313 + FLAM_C SINE Alu 1 124 -9 273 109 0 0 chr17 39324240 39324286 -50180267 + (TA)n Simple_repeat Simple_repeat 2 47 0 182 304 0 0 chr17 39325166 39325212 -50179341 - L2 LINE L2 -12 3301 3256 1975 157 0 40 chr17 39325230 39325555 -50178998 + AluJo SINE Alu 1 312 0 481 187 60 45 chr17 39325584 39325718 -50178835 + AluJo SINE Alu 7 142 -170 215 30 0 30 chr17 39326054 39326087 -50178466 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1712 158 11 0 chr17 39326095 39326355 -50178198 - AluJb SINE Alu -49 263 1 235 203 85 0 chr17 39326727 39326786 -50177767 - L2 LINE L2 -1 3312 3249 207 318 0 0 chr17 39327031 39327094 -50177459 + MIR SINE MIR 84 146 -116 800 169 6 42 chr17 39327096 39327262 -50177291 + L1MD3 LINE L1 7834 7993 -2 2260 95 0 3 chr17 39327318 39327625 -50176928 - AluSx SINE Alu 0 306 1 2046 126 4 0 chr17 39327625 39327903 -50176650 - AluSq SINE Alu -34 279 1 344 282 115 35 chr17 39327929 39328103 -50176450 - MIR SINE MIR -71 191 4 332 243 25 30 chr17 39328689 39328818 -50175735 + MIR SINE MIR 33 160 -66 185 274 65 16 chr17 39328967 39329029 -50175524 + L2 LINE L2 3156 3220 -52 365 235 0 0 chr17 39329077 39329145 -50175408 - MIR SINE MIR -88 174 107 213 237 0 0 chr17 39329237 39329296 -50175257 + (TGGA)n Simple_repeat Simple_repeat 1 59 0 338 237 29 12 chr17 39329355 39329528 -50175025 + (TGGA)n Simple_repeat Simple_repeat 1 176 0 418 279 130 7 chr17 39330100 39330254 -50174299 - MIR3 SINE MIR -3 205 33 420 285 44 37 chr17 39330805 39331011 -50173542 - MIR SINE MIR -48 214 2 297 289 103 53 chr17 39331259 39331522 -50173031 + L2 LINE L2 2878 3153 -119 267 278 53 23 chr17 39331967 39332100 -50172453 + MIR3 SINE MIR 44 180 -28 472 212 60 33 chr17 39332242 39332393 -50172160 - MIR SINE MIR -1 261 107 186 43 0 0 chr17 39332665 39332688 -50171865 + (GGGA)n Simple_repeat Simple_repeat 2 24 0 208 366 10 0 chr17 39332822 39332923 -50171630 + MIR3 SINE MIR 62 163 -45 192 250 118 0 chr17 39335025 39335101 -50169452 + L2 LINE L2 3187 3271 -1 272 258 16 0 chr17 39335393 39335455 -50169098 + MIR SINE MIR 112 174 -88 326 250 17 136 chr17 39336138 39336314 -50168239 - MER5B DNA MER1_type -15 163 9 195 219 0 0 chr17 39336356 39336397 -50168156 - L2 LINE L2 -3 3269 3229 513 285 22 22 chr17 39336595 39336774 -50167779 - MIR SINE MIR -6 256 78 264 284 274 0 chr17 39337812 39337914 -50166639 - L2 LINE L2 0 3272 3143 2369 99 0 3 chr17 39340691 39340994 -50163559 + AluSx SINE Alu 1 302 -10 312 247 54 11 chr17 39342059 39342152 -50162401 - L2 LINE L2 -28 3285 3189 318 224 215 0 chr17 39342275 39342382 -50162171 + MIR SINE MIR 21 150 -58 1850 109 148 42 chr17 39342385 39342589 -50161964 - MSTA LTR MaLR -2 426 245 2402 86 0 0 chr17 39342589 39342881 -50161672 - AluSg SINE Alu -18 292 1 1850 109 148 42 chr17 39342881 39343061 -50161492 - MSTA LTR MaLR -183 245 1 574 309 26 10 chr17 39343065 39343259 -50161294 - L2 LINE L2 0 3313 3117 228 158 0 0 chr17 39343269 39343307 -50161246 + L1MC/D LINE L1 5713 5750 -492 323 313 89 41 chr17 39343308 39343554 -50160999 - L2 LINE L2 -420 2894 2637 1523 241 131 22 chr17 39343556 39344298 -50160255 + L1ME3 LINE L1 5323 6153 -9 1062 109 0 7 chr17 39344455 39344602 -50159951 + AluJb SINE Alu 164 309 -3 1795 121 62 49 chr17 39344634 39344941 -50159612 + AluJo SINE Alu 1 311 -1 289 282 107 47 chr17 39344984 39345183 -50159370 + MIR SINE MIR 32 261 -1 229 262 24 0 chr17 39345261 39345281 -50159272 - HAL1b LINE L1 -30 1318 1299 330 181 38 95 chr17 39345281 39345386 -50159167 - L1ME4a LINE L1 -60 6061 1233 315 228 0 30 chr17 39345405 39345506 -50159047 - HAL1b LINE L1 0 1348 1251 288 304 0 38 chr17 39346693 39346772 -50157781 - MIR SINE MIR -70 192 117 933 234 21 11 chr17 39346779 39347065 -50157488 + MER33 DNA MER1_type 1 289 -35 2001 160 0 3 chr17 39347136 39347430 -50157123 + AluJb SINE Alu 1 293 -19 830 184 119 0 chr17 39347430 39347615 -50156938 - MER58A DNA MER1_type -17 207 1 339 333 70 0 chr17 39347635 39347764 -50156789 + MIR SINE MIR 8 145 -117 1756 239 60 34 chr17 39347764 39348377 -50156176 + L1ME4a LINE L1 5306 5961 -160 2338 78 4 0 chr17 39348377 39348680 -50155873 + AluSp SINE Alu 1 304 0 1756 239 60 34 chr17 39348680 39348842 -50155711 + L1ME4a LINE L1 5961 6117 -4 507 321 113 50 chr17 39348871 39349350 -50155203 + L1ME LINE L1 5310 5818 -303 627 237 79 75 chr17 39349585 39349754 -50154799 + MIR SINE MIR 16 188 -74 1947 140 50 0 chr17 39349754 39350033 -50154520 + AluSx SINE Alu 1 293 -19 627 237 79 75 chr17 39350033 39350091 -50154462 + MIR SINE MIR 188 244 -18 415 280 172 11 chr17 39350304 39350490 -50154063 + MIR SINE MIR 31 246 -16 437 301 45 46 chr17 39350719 39350919 -50153634 + MIR SINE MIR 3 200 -62 2399 108 0 0 chr17 39351180 39351485 -50153068 + AluSx SINE Alu 1 305 -7 202 244 0 0 chr17 39351505 39351550 -50153003 + (TAA)n Simple_repeat Simple_repeat 2 46 0 581 274 72 24 chr17 39351553 39351761 -50152792 - MIR SINE MIR -32 230 13 232 283 0 0 chr17 39352946 39353019 -50151534 + C-rich Low_complexity Low_complexity 1 73 0 238 304 74 15 chr17 39355608 39355743 -50148810 - MIR SINE MIR -7 255 113 201 213 0 0 chr17 39356290 39356337 -50148216 + (TG)n Simple_repeat Simple_repeat 2 48 0 249 372 53 18 chr17 39357491 39357717 -50146836 - L2 LINE L2 -212 3060 2827 1077 275 0 26 chr17 39358483 39358752 -50145801 - MIR SINE MIR 0 262 1 380 263 197 0 chr17 39359014 39359151 -50145402 + MIR3 SINE MIR 19 182 -26 297 273 0 0 chr17 39359151 39359217 -50145336 + MIR3 SINE MIR 129 194 -14 646 268 0 18 chr17 39359221 39359389 -50145164 + MER5B DNA MER1_type 2 166 -12 244 247 96 0 chr17 39360652 39360725 -50143828 + MIR SINE MIR 112 191 -71 26 93 0 0 chr17 39360787 39360862 -50143691 + AT_rich Low_complexity Low_complexity 1 75 0 203 321 0 46 chr17 39361338 39361469 -50143084 + CT-rich Low_complexity Low_complexity 3 127 0 438 110 25 42 chr17 39361493 39361611 -50142942 + CT-rich Low_complexity Low_complexity 1 116 0 331 248 53 110 chr17 39361923 39362129 -50142424 + MIR SINE MIR 16 210 -52 2122 104 0 24 chr17 39362303 39362621 -50141932 + AluSg SINE Alu 2 312 0 455 279 7 15 chr17 39362653 39362789 -50141764 - MIR SINE MIR -117 145 11 414 201 60 60 chr17 39364247 39364275 -50140278 + L2 LINE L2 3178 3205 -108 2359 99 3 3 chr17 39364275 39364578 -50139975 + AluSp SINE Alu 1 303 -10 414 201 60 60 chr17 39364578 39364683 -50139870 + L2 LINE L2 3204 3311 -2 276 238 43 162 chr17 39364714 39364899 -50139654 - MIR SINE MIR -93 169 7 779 121 0 24 chr17 39365150 39365274 -50139279 + FLAM_C SINE Alu 1 121 -12 22 56 0 0 chr17 39365281 39365317 -50139236 + AT_rich Low_complexity Low_complexity 1 36 0 258 226 75 0 chr17 39365476 39365529 -50139024 - MIR SINE MIR -87 175 119 495 265 45 58 chr17 39365545 39365768 -50138785 - L2 LINE L2 -1 3312 3093 206 189 0 19 chr17 39365865 39365918 -50138635 + GA-rich Low_complexity Low_complexity 4 55 0 549 316 11 37 chr17 39366150 39366367 -50138186 + MIR SINE MIR 3 212 -50 560 254 146 0 chr17 39367228 39367393 -50137160 + MER5A DNA MER1_type 1 189 0 263 320 82 8 chr17 39368490 39368612 -50135941 - L2 LINE L2 -9 3263 3133 421 301 110 38 chr17 39368657 39368893 -50135660 + MIR SINE MIR 9 261 -1 591 249 30 24 chr17 39369556 39369721 -50134832 + MIR SINE MIR 20 185 -77 255 306 59 0 chr17 39369787 39369835 -50134718 - L2 LINE L2 -34 3279 3235 2498 100 0 0 chr17 39369835 39370146 -50134407 + AluSx SINE Alu 1 311 -1 255 306 59 0 chr17 39370146 39370182 -50134371 - L2 LINE L2 -78 3235 3190 228 304 161 18 chr17 39370244 39370412 -50134141 - L3 LINE CR1 -81 1496 1305 397 204 71 0 chr17 39370625 39370738 -50133815 + LTR16C LTR ERVL 371 491 0 180 268 49 24 chr17 39372316 39372398 -50132155 - MIR SINE MIR -80 128 45 294 120 0 20 chr17 39372628 39372678 -50131875 + MLT1K LTR MaLR 510 558 -30 386 346 26 6 chr17 39372780 39372936 -50131617 - MIR3 SINE MIR -48 160 2 918 301 75 27 chr17 39373789 39374124 -50130429 + MLT1I LTR MaLR 59 409 0 218 255 59 111 chr17 39374174 39374630 -50129923 + MER5A DNA MER1_type 2 146 -43 269 339 61 42 chr17 39374211 39374253 -50130300 - MER5A DNA MER1_type -21 168 128 2138 122 3 0 chr17 39374253 39374557 -50129996 - AluSx SINE Alu -7 305 1 269 339 61 42 chr17 39374557 39374679 -50129874 - MER5A DNA MER1_type -61 128 1 220 229 0 0 chr17 39375038 39375086 -50129467 + A-rich Low_complexity Low_complexity 1 48 0 936 129 0 168 chr17 39376082 39376314 -50128239 - 7SK RNA RNA 0 193 1 2545 47 0 0 chr17 39376762 39377061 -50127492 + AluY SINE Alu 1 299 -12 183 290 72 0 chr17 39377153 39377222 -50127331 - MIR SINE MIR -144 118 45 552 271 73 26 chr17 39377388 39377580 -50126973 + MIR SINE MIR 10 210 -52 182 354 24 24 chr17 39379174 39379301 -50125252 + MIR SINE MIR 22 148 -114 299 370 35 13 chr17 39379342 39379577 -50124976 + MIR SINE MIR 2 242 -20 211 222 0 48 chr17 39379579 39379642 -50124911 + L2 LINE L2 3201 3260 -12 2140 116 0 0 chr17 39379644 39379945 -50124608 + AluSx SINE Alu 1 301 -11 213 309 0 29 chr17 39380121 39380189 -50124364 - MIR SINE MIR -116 146 81 4254 82 12 21 chr17 39380206 39380630 -50123923 + MER41A LTR ERV1 1 420 -134 2317 77 7 0 chr17 39380630 39380929 -50123624 - AluSp SINE Alu -12 301 1 4254 82 12 21 chr17 39380929 39381063 -50123490 + MER41A LTR ERV1 420 554 0 522 326 63 17 chr17 39381152 39381391 -50123162 - MIR SINE MIR -1 261 12 356 319 61 57 chr17 39381818 39382047 -50122506 + MIR SINE MIR 24 253 -9 270 160 0 0 chr17 39382054 39382104 -50122449 + CT-rich Low_complexity Low_complexity 1 50 0 298 318 75 0 chr17 39382395 39382542 -50122011 - MIR3 SINE MIR -12 196 36 343 263 40 0 chr17 39383253 39383352 -50121201 - MER5B DNA MER1_type 0 178 76 1176 209 134 73 chr17 39383352 39383447 -50121106 - MLT1F1 LTR MaLR -7 535 447 2705 87 37 15 chr17 39383447 39383806 -50120747 - L1PB1 LINE L1 0 6151 5801 252 0 0 0 chr17 39383806 39383834 -50120719 + (TG)n Simple_repeat Simple_repeat 2 29 0 189 0 0 0 chr17 39383833 39383854 -50120699 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 2705 87 37 15 chr17 39383834 39383897 -50120656 - L1PB1 LINE L1 -350 5801 5740 1176 209 134 73 chr17 39383897 39384307 -50120246 - MLT1F1 LTR MaLR -95 447 1 385 208 13 0 chr17 39384312 39384389 -50120164 - MER5B DNA MER1_type -100 78 1 2170 131 0 0 chr17 39384799 39385111 -50119442 - AluSx SINE Alu 0 312 1 213 226 0 0 chr17 39385113 39385166 -50119387 + CT-rich Low_complexity Low_complexity 2 54 0 198 219 0 0 chr17 39385606 39385670 -50118883 + CT-rich Low_complexity Low_complexity 1 64 0 21 0 0 0 chr17 39386094 39386115 -50118438 + AT_rich Low_complexity Low_complexity 1 21 0 409 282 267 0 chr17 39386923 39387118 -50117435 + MIR SINE MIR 13 259 -3 439 319 49 49 chr17 39387170 39387396 -50117157 - MIR SINE MIR -17 245 20 214 67 44 44 chr17 39387518 39387563 -50116990 + GA-rich Low_complexity Low_complexity 4 48 0 1058 171 11 0 chr17 39387684 39387859 -50116694 + AluSg/x SINE Alu 135 311 -1 251 229 0 16 chr17 39387859 39387920 -50116633 + GA-rich Low_complexity Low_complexity 1 60 0 366 302 31 31 chr17 39387960 39388089 -50116464 + L1ME3A LINE L1 6037 6165 -5 330 143 18 0 chr17 39388102 39388158 -50116395 + L1MB7 LINE L1 6128 6184 0 2127 117 3 0 chr17 39388680 39388979 -50115574 - AluSq SINE Alu -13 300 1 1891 155 0 0 chr17 39388988 39389284 -50115269 - AluJo SINE Alu -15 297 2 411 286 8 0 chr17 39389462 39389581 -50114972 - MER103 DNA DNA -44 122 3 587 299 108 5 chr17 39389653 39389823 -50114730 + MIR SINE MIR 21 219 -43 2024 116 3 0 chr17 39389823 39390107 -50114446 + AluSx SINE Alu 1 285 -27 587 299 108 5 chr17 39390107 39390150 -50114403 + MIR SINE MIR 219 256 -6 733 256 64 39 chr17 39390359 39390593 -50113960 + MIR SINE MIR 23 262 0 2623 153 5 21 chr17 39390827 39391258 -50113295 - MSTB LTR MaLR -2 424 1 194 328 156 16 chr17 39391414 39391542 -50113011 - MIR SINE MIR -115 147 2 197 354 38 32 chr17 39392967 39393125 -50111428 - L2 LINE L2 -466 2848 2690 978 292 8 4 chr17 39393609 39393849 -50110704 + MIR SINE MIR 16 256 -6 189 307 44 88 chr17 39393831 39393851 -50110702 - L2 LINE L2 -8 3305 3286 * 2423 69 0 0 chr17 39393851 39394155 -50110398 - AluY SINE Alu -7 304 1 189 307 44 88 chr17 39394155 39394248 -50110305 - L2 LINE L2 -27 3286 3197 220 319 138 0 chr17 39394449 39394565 -50109988 + L2 LINE L2 2929 3060 -212 835 161 0 15 chr17 39395033 39395348 -50109205 + FLAM_C SINE Alu 2 314 0 369 317 83 0 chr17 39395683 39395828 -50108725 + MIR SINE MIR 20 176 -86 2062 102 0 11 chr17 39395950 39396263 -50108290 - AluSc SINE Alu 0 310 1 219 295 0 0 chr17 39396439 39396551 -50108002 + (TG)n Simple_repeat Simple_repeat 2 113 0 516 356 0 0 chr17 39396586 39396760 -50107793 + (TG)n Simple_repeat Simple_repeat 1 174 0 183 257 0 0 chr17 39396775 39396849 -50107704 + (TG)n Simple_repeat Simple_repeat 2 75 0 230 298 0 36 chr17 39396856 39396940 -50107613 + GA-rich Low_complexity Low_complexity 4 84 0 508 285 14 0 chr17 39397472 39397616 -50106937 + MIR3 SINE MIR 63 208 0 398 261 123 0 chr17 39398287 39398417 -50106136 + MIR SINE MIR 113 258 -4 347 362 90 1 chr17 39399022 39399190 -50105363 + MIR SINE MIR 8 188 -62 982 185 21 5 chr17 39399694 39399883 -50104670 - AluJb SINE Alu -17 295 104 251 298 65 6 chr17 39399978 39400144 -50104409 + MIR SINE MIR 23 196 -62 224 265 0 0 chr17 39400694 39400756 -50103797 + C-rich Low_complexity Low_complexity 1 62 0 680 204 0 6 chr17 39400994 39401166 -50103387 + (TG)n Simple_repeat Simple_repeat 1 171 0 196 274 0 0 chr17 39401913 39401964 -50102589 + L2 LINE L2 3139 3189 -83 318 290 120 43 chr17 39402067 39402260 -50102293 + MIR SINE MIR 32 250 -12 297 0 0 0 chr17 39402372 39402405 -50102148 + (CA)n Simple_repeat Simple_repeat 2 34 0 1558 169 32 14 chr17 39403247 39403351 -50101202 + AluJb SINE Alu 16 117 -195 207 0 0 0 chr17 39403351 39403374 -50101179 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1558 169 32 14 chr17 39403374 39403553 -50101000 + AluJb SINE Alu 117 304 -8 403 323 41 10 chr17 39403557 39403752 -50100801 - MIR SINE MIR -56 206 6 495 229 171 7 chr17 39403767 39403907 -50100646 - L1M4 LINE L1 -1043 5103 4941 295 264 16 16 chr17 39404339 39404468 -50100085 + (TG)n Simple_repeat Simple_repeat 1 129 0 231 191 0 0 chr17 39404713 39404755 -50099798 + C-rich Low_complexity Low_complexity 3 44 0 393 305 136 0 chr17 39405359 39405513 -50099040 + MER91A DNA MER1_type 2 176 -20 206 171 24 0 chr17 39405562 39405603 -50098950 + MER91A DNA MER1_type 149 190 0 1861 121 29 0 chr17 39405671 39406037 -50098516 + AluSg SINE Alu 1 374 0 1767 184 26 0 chr17 39406046 39406455 -50098098 + AluJb SINE Alu 1 417 0 238 146 18 18 chr17 39406563 39406618 -50097935 + CT-rich Low_complexity Low_complexity 2 56 0 312 27 0 0 chr17 39406618 39406655 -50097898 + (CA)n Simple_repeat Simple_repeat 1 37 0 424 260 130 18 chr17 39407048 39407271 -50097282 - MIR SINE MIR -3 259 12 784 237 26 11 chr17 39407324 39407535 -50097018 - MIR SINE MIR -15 247 34 330 26 0 0 chr17 39408534 39408573 -50095980 + (CA)n Simple_repeat Simple_repeat 2 40 0 2091 119 0 0 chr17 39409216 39409511 -50095042 + AluSx SINE Alu 1 295 -17 180 326 92 31 chr17 39410057 39410155 -50094398 - MIR SINE MIR -77 131 28 1873 120 46 0 chr17 39410213 39410497 -50094056 + AluJb SINE Alu 1 297 -15 249 250 0 0 chr17 39411455 39411519 -50093034 + (CA)n Simple_repeat Simple_repeat 2 65 0 364 263 38 13 chr17 39411618 39411735 -50092818 + MIR3 SINE MIR 70 193 -15 425 329 7 7 chr17 39411792 39411935 -50092618 + MIR SINE MIR 16 158 -104 189 0 0 0 chr17 39412683 39412704 -50091849 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 186 43 0 0 chr17 39412943 39412966 -50091587 + (GA)n Simple_repeat Simple_repeat 2 24 0 220 143 12 48 chr17 39413070 39413154 -50091399 + GA-rich Low_complexity Low_complexity 1 81 0 359 294 61 31 chr17 39413684 39413847 -50090706 - MIR SINE MIR -82 180 13 329 256 8 85 chr17 39414659 39414788 -50089765 - L2 LINE L2 0 3313 3195 416 233 139 23 chr17 39415341 39415491 -50089062 + MIR SINE MIR 37 197 -65 280 268 0 14 chr17 39415674 39415745 -50088808 + MIR3 SINE MIR 107 176 -32 180 152 0 0 chr17 39415953 39415986 -50088567 + (CCA)n Simple_repeat Simple_repeat 1 33 0 1602 110 25 4 chr17 39417708 39417953 -50086600 + AluSx SINE Alu 63 312 0 2609 165 50 20 chr17 39417967 39418463 -50086090 + L1MB8 LINE L1 5668 6178 0 1099 230 36 0 chr17 39418466 39418748 -50085805 + L1MB7 LINE L1 5864 6184 0 669 130 106 0 chr17 39418748 39418871 -50085682 - MER5A DNA MER1_type -53 136 1 255 212 91 30 chr17 39420112 39420178 -50084375 + L2 LINE L2 3153 3222 -50 183 80 0 0 chr17 39420198 39420223 -50084330 + (ATG)n Simple_repeat Simple_repeat 3 27 0 424 276 5 82 chr17 39420228 39420291 -50084262 - MIR SINE MIR -10 252 186 2210 117 0 0 chr17 39420291 39420600 -50083953 - AluSg SINE Alu -1 309 1 424 276 5 82 chr17 39420600 39420732 -50083821 - MIR SINE MIR -76 186 72 197 309 65 50 chr17 39421319 39421458 -50083095 - MIR3 SINE MIR -10 198 58 195 268 71 0 chr17 39421594 39421650 -50082903 - MIR SINE MIR -97 165 106 1701 168 3 3 chr17 39422116 39422413 -50082140 + AluJb SINE Alu 1 297 -15 309 252 148 9 chr17 39422514 39422629 -50081924 + L1ME4a LINE L1 5990 6120 -1 954 205 0 0 chr17 39422637 39422803 -50081750 - FRAM SINE Alu 0 166 1 388 300 23 0 chr17 39423935 39424073 -50080480 + L1ME LINE L1 5677 5818 -303 672 162 29 6 chr17 39424958 39425131 -50079422 + CT-rich Low_complexity Low_complexity 3 179 0 989 87 0 0 chr17 39426508 39426634 -50077919 + AluSq/x SINE Alu 23 148 -165 298 256 150 15 chr17 39427050 39427183 -50077370 - MIR SINE MIR -44 218 68 320 270 16 71 chr17 39427342 39427468 -50077085 - MIR SINE MIR -60 202 84 405 314 66 15 chr17 39427518 39427655 -50076898 - MIR SINE MIR -23 239 96 232 281 0 0 chr17 39427748 39427805 -50076748 + L2 LINE L2 3248 3304 -9 332 59 20 0 chr17 39429669 39429720 -50074833 + (TC)n Simple_repeat Simple_repeat 1 52 0 520 298 162 5 chr17 39429769 39429960 -50074593 + MIR SINE MIR 35 255 -7 770 168 24 0 chr17 39430354 39430479 -50074074 + FLAM_C SINE Alu 2 129 -14 186 372 44 7 chr17 39430485 39430622 -50073931 + MIR SINE MIR 121 262 0 2059 116 23 7 chr17 39430665 39430968 -50073585 + AluSx SINE Alu 1 308 -4 253 269 65 32 chr17 39431551 39431644 -50072909 - MIR SINE MIR -55 207 112 231 295 66 57 chr17 39431768 39431890 -50072663 + MIR3 SINE MIR 5 127 -81 1985 113 10 0 chr17 39431986 39432277 -50072276 + AluSx SINE Alu 5 298 -14 2203 106 10 0 chr17 39432880 39433356 -50071197 + AluSx SINE Alu 1 479 0 206 196 18 18 chr17 39434473 39434529 -50070024 + (CAGAGA)n Simple_repeat Simple_repeat 5 60 0 2289 97 0 0 chr17 39436071 39436371 -50068182 - AluSx SINE Alu -12 300 1 280 287 29 0 chr17 39436642 39436778 -50067775 + (CA)n Simple_repeat Simple_repeat 1 140 0 315 335 70 6 chr17 39437566 39437724 -50066829 - MIR SINE MIR -75 187 20 587 258 169 31 chr17 39438001 39438327 -50066226 - L3 LINE CR1 -24 1553 1183 4881 170 18 10 chr17 39438391 39438978 -50065575 + L1MB2 LINE L1 5073 5677 -494 2152 114 20 0 chr17 39438978 39439275 -50065278 - AluSx SINE Alu -9 303 1 4881 170 18 10 chr17 39439275 39439737 -50064816 + L1MB2 LINE L1 5677 6134 -37 488 268 109 0 chr17 39439741 39439879 -50064674 + MIR SINE MIR 20 172 -90 584 225 390 22 chr17 39440032 39440388 -50064165 + L2 LINE L2 2821 3307 -6 2206 92 0 10 chr17 39440965 39441269 -50063284 + AluSx SINE Alu 1 301 -11 338 260 91 45 chr17 39441313 39441467 -50063086 - MIR SINE MIR -63 199 39 1580 138 47 30 chr17 39441643 39441940 -50062613 + AluJo SINE Alu 9 310 -2 197 352 14 0 chr17 39442448 39442519 -50062034 - L2 LINE L2 0 3313 3242 2130 86 18 0 chr17 39442634 39442947 -50061606 - AluSx SINE Alu 0 318 1 2260 82 7 0 chr17 39442986 39443279 -50061274 - AluSp SINE Alu -15 298 4 301 263 306 0 chr17 39443878 39444038 -50060515 - MIR SINE MIR -3 259 51 231 114 0 0 chr17 39444553 39444588 -50059965 + (CAT)n Simple_repeat Simple_repeat 3 37 0 745 201 6 45 chr17 39444594 39444773 -50059780 - MIR SINE MIR -3 259 88 718 280 17 34 chr17 39445807 39446046 -50058507 - MIR SINE MIR -20 242 8 1783 217 89 31 chr17 39446675 39447159 -50057394 - MLT2B1 LTR ERVL -8 512 1 405 292 34 39 chr17 39447488 39447545 -50057008 - MER5B DNA MER1_type 0 178 122 2187 109 0 3 chr17 39447545 39447848 -50056705 + AluSx SINE Alu 1 302 -10 405 292 34 39 chr17 39447848 39447968 -50056585 - MER5B DNA MER1_type -56 122 2 2440 57 0 0 chr17 39448128 39448427 -50056126 + AluY SINE Alu 1 299 -12 1952 104 11 18 chr17 39448448 39448728 -50055825 + AluSx SINE Alu 14 291 -21 324 270 228 21 chr17 39448839 39449028 -50055525 - MIR SINE MIR -13 249 22 988 184 32 5 chr17 39449033 39449223 -50055330 + MER20 DNA MER1_type 17 211 -8 504 245 101 0 chr17 39449239 39449398 -50055155 + MER5B DNA MER1_type 3 177 -1 246 135 0 0 chr17 39449712 39449749 -50054804 - MIR SINE MIR -71 191 155 1759 159 7 10 chr17 39451021 39451322 -50053231 - AluJb SINE Alu -9 303 4 1524 139 87 45 chr17 39451357 39451451 -50053102 + AluSx SINE Alu 1 90 -222 2314 84 3 3 chr17 39451451 39451759 -50052794 + AluSp SINE Alu 3 310 -3 2154 86 3 26 chr17 39451759 39452063 -50052490 + AluSx SINE Alu 3 299 -13 1524 139 87 45 chr17 39452063 39452255 -50052298 + AluSx SINE Alu 89 300 -12 359 223 48 58 chr17 39452318 39452421 -50052132 - L2 LINE L2 0 3313 3212 1568 249 249 9 chr17 39452421 39453009 -50051544 - L2 LINE L2 -244 3069 2623 197 65 32 0 chr17 39453009 39453040 -50051513 + (CAA)n Simple_repeat Simple_repeat 3 34 0 1568 249 249 9 chr17 39453040 39453191 -50051362 - L2 LINE L2 -690 2623 2153 1425 156 14 78 chr17 39453196 39453491 -50051062 + AluJo SINE Alu 1 276 -36 207 0 0 0 chr17 39453493 39453516 -50051037 + (TC)n Simple_repeat Simple_repeat 2 24 0 2228 105 0 0 chr17 39453516 39453812 -50050741 - AluSq SINE Alu -17 296 1 2012 116 17 0 chr17 39453853 39454145 -50050408 - AluY SINE Alu -14 297 1 851 288 121 0 chr17 39454167 39454473 -50050080 - L2 LINE L2 -1156 2158 1816 506 285 144 25 chr17 39454478 39454762 -50049791 - L2 LINE L2 -1639 1675 1358 1087 128 147 92 chr17 39454833 39454971 -50049582 + MER33 DNA MER1_type 2 131 -2454 1770 151 18 0 chr17 39454971 39455255 -50049298 + AluSq SINE Alu 1 289 -24 1087 128 147 92 chr17 39455255 39455422 -50049131 + MER33 DNA MER1_type 131 324 0 282 330 80 0 chr17 39459239 39459339 -50045214 - MIR SINE MIR -58 150 43 232 364 68 8 chr17 39460251 39460383 -50044170 - MIR SINE MIR -52 210 71 333 264 35 0 chr17 39461639 39461726 -50042827 - MIR3 SINE MIR -5 203 114 323 220 211 9 chr17 39462043 39462152 -50042401 - L2 LINE L2 -1 3312 3182 526 240 111 65 chr17 39462155 39462210 -50042343 + MER102b DNA MER1_type 113 164 -1264 2050 94 7 20 chr17 39462210 39462507 -50042046 + AluSc SINE Alu 1 293 -16 526 240 111 65 chr17 39462507 39462668 -50041885 + MER102b DNA MER1_type 164 339 -2 226 304 14 0 chr17 39462695 39462764 -50041789 - MIR SINE MIR -118 144 75 2134 121 0 10 chr17 39462947 39463261 -50041292 + AluSx SINE Alu 1 311 -1 1726 114 76 4 chr17 39463954 39464244 -50040309 + AluSx SINE Alu 1 309 0 28 0 0 0 chr17 39466851 39466879 -50037674 + GC_rich Low_complexity Low_complexity 1 28 0 262 242 200 8 chr17 39467401 39467521 -50037032 - MIR SINE MIR 0 262 120 23 33 0 0 chr17 39468832 39468862 -50035691 + AT_rich Low_complexity Low_complexity 1 30 0 998 113 19 25 chr17 39469912 39470072 -50034481 + AluSg/x SINE Alu 142 300 -10 2238 83 10 0 chr17 39470113 39470414 -50034139 + AluSp SINE Alu 1 304 -9 2184 101 0 0 chr17 39470775 39471062 -50033491 - AluSc SINE Alu -22 287 1 405 281 0 0 chr17 39471104 39471193 -50033360 + Tigger5 DNA MER2_type 2234 2322 -1 21 36 0 0 chr17 39471722 39471750 -50032803 + AT_rich Low_complexity Low_complexity 1 28 0 2009 138 0 0 chr17 39471750 39472039 -50032514 + AluSx SINE Alu 1 289 -23 227 337 43 0 chr17 39472105 39472197 -50032356 - MIR SINE MIR -14 248 153 2807 168 84 52 chr17 39473434 39473694 -50030859 + Charlie1a DNA MER1_type 67 317 -2444 1708 155 16 30 chr17 39473694 39473998 -50030555 - AluJo SINE Alu -8 304 5 418 169 0 0 chr17 39473937 39474002 -50030551 - AluJ/FLAM SINE Alu -237 65 1 * 2807 168 84 52 chr17 39474002 39474031 -50030522 + Charlie1a DNA MER1_type 321 347 -2414 2093 129 0 0 chr17 39474031 39474325 -50030228 + AluSx SINE Alu 1 294 -18 2807 168 84 52 chr17 39474325 39474906 -50029647 + Charlie1a DNA MER1_type 347 908 -1853 1874 156 0 14 chr17 39474906 39475201 -50029352 + AluSx SINE Alu 1 291 -21 2807 168 84 52 chr17 39475201 39475318 -50029235 + Charlie1a DNA MER1_type 908 1020 -1741 2498 62 0 0 chr17 39475318 39475606 -50028947 + AluSc SINE Alu 2 289 -20 2807 168 84 52 chr17 39475606 39475885 -50028668 + Charlie1a DNA MER1_type 1020 1454 -1 927 149 43 12 chr17 39476110 39476271 -50028282 - MER2 DNA MER2_type 0 345 180 1141 114 13 0 chr17 39476271 39476429 -50028124 - AluSg/x SINE Alu -16 296 137 1080 141 31 52 chr17 39476430 39476490 -50028063 - MER2 DNA MER2_type -158 187 127 1779 181 0 3 chr17 39476490 39476783 -50027770 + AluJb SINE Alu 1 292 -20 1080 141 31 52 chr17 39476783 39476913 -50027640 - MER2 DNA MER2_type -218 127 1 35 0 0 0 chr17 39476916 39476951 -50027602 + AT_rich Low_complexity Low_complexity 1 35 0 736 133 0 17 chr17 39476951 39477071 -50027482 - FLAM_C SINE Alu -15 118 1 2561 60 0 3 chr17 39477366 39477666 -50026887 - AluY SINE Alu -12 299 1 2116 136 3 0 chr17 39477736 39478031 -50026522 - AluSx SINE Alu -16 296 1 2469 76 0 16 chr17 39478157 39478471 -50026082 + AluY SINE Alu 1 309 -2 2451 91 3 0 chr17 39478631 39478940 -50025613 - AluSq SINE Alu -3 310 1 298 313 100 61 chr17 39481569 39481879 -50022674 + L2 LINE L2 2155 2476 -838 476 194 19 0 chr17 39481981 39482089 -50022464 + (CATATA)n Simple_repeat Simple_repeat 3 112 0 2372 92 0 6 chr17 39482089 39482403 -50022150 - AluSx SINE Alu 0 312 1 2267 78 4 0 chr17 39482541 39482850 -50021703 + AluSp SINE Alu 1 310 0 2112 128 0 3 chr17 39482902 39483198 -50021355 - AluSx SINE Alu -17 295 1 2406 90 0 0 chr17 39483307 39483606 -50020947 + AluSq SINE Alu 1 299 -14 360 0 0 0 chr17 39483606 39483646 -50020907 + (TA)n Simple_repeat Simple_repeat 2 41 0 676 158 24 36 chr17 39483748 39483913 -50020640 + L1MB1 LINE L1 4974 5136 -1010 198 143 0 0 chr17 39484025 39484060 -50020493 + (CTGGGG)n Simple_repeat Simple_repeat 6 40 0 636 135 58 0 chr17 39484857 39484961 -50019592 - Tigger3(Golem) DNA MER2_type 0 3038 2929 22 0 0 0 chr17 39484962 39484984 -50019569 + AT_rich Low_complexity Low_complexity 1 22 0 481 215 0 0 chr17 39485059 39485138 -50019415 - Tigger3(Golem) DNA MER2_type -2949 80 2 721 188 57 11 chr17 39485139 39485315 -50019238 + L1MB1 LINE L1 5146 5329 -817 406 119 45 0 chr17 39485315 39485382 -50019171 + AluJ/FRAM SINE Alu 228 297 -5 3729 139 40 101 chr17 39485394 39485871 -50018682 + L1MB1 LINE L1 5316 5716 -452 2147 98 7 0 chr17 39485871 39486148 -50018405 + AluSx SINE Alu 25 303 -9 3729 139 40 101 chr17 39486148 39486554 -50017999 + L1MB1 LINE L1 5716 6145 -23 1611 175 25 18 chr17 39486560 39486846 -50017707 - AluJb SINE Alu -24 288 1 1704 144 16 77 chr17 39487198 39487387 -50017166 - AluJo SINE Alu -19 293 94 2411 80 0 6 chr17 39487387 39487700 -50016853 - AluY SINE Alu 0 311 1 2085 115 10 3 chr17 39487702 39487990 -50016563 - AluSg SINE Alu -20 290 1 1704 144 16 77 chr17 39487990 39488109 -50016444 - AluJo SINE Alu -219 93 1 329 95 0 0 chr17 39488169 39488211 -50016342 + U2 snRNA snRNA 1 42 -146 2131 128 3 0 chr17 39488231 39488521 -50016032 - AluSx SINE Alu -21 291 1 2316 103 0 13 chr17 39488531 39488842 -50015711 - AluSq SINE Alu -6 307 1 1605 180 3 41 chr17 39488847 39489164 -50015389 - AluJb SINE Alu -7 305 1 1937 136 31 0 chr17 39489844 39490130 -50014423 - AluSx SINE Alu -17 295 1 2098 128 3 0 chr17 39490207 39490503 -50014050 + AluSc SINE Alu 1 297 -12 2167 117 10 0 chr17 39490666 39490964 -50013589 + AluSx SINE Alu 1 301 -11 2304 103 0 0 chr17 39491036 39491328 -50013225 + AluSc SINE Alu 1 292 -17 772 163 0 22 chr17 39492240 39492375 -50012178 - FLAM_C SINE Alu 0 133 2 1752 130 6 73 chr17 39492566 39492882 -50011671 - AluJo SINE Alu -17 295 1 2338 90 0 0 chr17 39493354 39493644 -50010909 - AluSg SINE Alu -20 290 1 437 262 193 13 chr17 39493981 39494214 -50010339 + L2 LINE L2 1824 2098 -1216 29 0 0 0 chr17 39495171 39495200 -50009353 + AT_rich Low_complexity Low_complexity 1 29 0 2333 88 3 25 chr17 39495215 39495534 -50009019 + AluSx SINE Alu 1 312 0 433 257 107 34 chr17 39495606 39495960 -50008593 + L1MC5 LINE L1 7538 7917 -44 2198 113 0 0 chr17 39495963 39496276 -50008277 - AluSq SINE Alu 0 313 1 2296 101 37 0 chr17 39496276 39496574 -50007979 - AluSg SINE Alu -1 309 1 2080 128 3 13 chr17 39496790 39497096 -50007457 + AluSx SINE Alu 1 303 -9 2365 85 3 0 chr17 39497336 39497641 -50006912 + AluY SINE Alu 1 306 -5 2247 107 7 0 chr17 39497837 39498136 -50006417 + AluSx SINE Alu 1 301 -11 22 35 0 0 chr17 39498161 39498190 -50006363 + AT_rich Low_complexity Low_complexity 1 29 0 704 211 0 15 chr17 39498710 39498843 -50005710 + FLAM_A SINE Alu 2 132 -1 222 277 0 15 chr17 39498935 39499000 -50005553 + L2 LINE L2 2483 2546 -768 785 201 0 8 chr17 39499002 39499136 -50005417 + AluJo SINE Alu 2 134 -178 1787 124 66 15 chr17 39499138 39499411 -50005142 + AluSg SINE Alu 1 287 -23 828 231 15 46 chr17 39499453 39499713 -50004840 + L2 LINE L2 2537 2788 -526 893 259 241 29 chr17 39499717 39499934 -50004619 + L2 LINE L2 2108 2278 -1035 2257 104 10 0 chr17 39499934 39500241 -50004312 - AluSx SINE Alu -2 310 1 893 259 241 29 chr17 39500241 39500503 -50004050 + L2 LINE L2 2278 2483 -830 2151 108 3 3 chr17 39500503 39500798 -50003755 + AluSq SINE Alu 1 295 -18 893 259 241 29 chr17 39500798 39500820 -50003733 + L2 LINE L2 2483 2499 -814 2259 104 3 3 chr17 39500820 39501127 -50003426 - AluSq SINE Alu -6 307 1 2291 98 0 0 chr17 39501131 39501427 -50003126 - AluSg SINE Alu -14 296 1 893 259 241 29 chr17 39501427 39501754 -50002799 + L2 LINE L2 2501 3174 -139 252 0 0 0 chr17 39502478 39502506 -50002047 + (A)n Simple_repeat Simple_repeat 1 28 0 2396 90 0 10 chr17 39502524 39502834 -50001719 - AluSc SINE Alu -2 307 1 194 0 39 0 chr17 39502834 39502860 -50001693 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1703 128 76 30 chr17 39503314 39503554 -50000999 - MER2 DNA MER2_type 0 344 84 1662 195 0 7 chr17 39503554 39503846 -50000707 - AluJb SINE Alu -22 290 1 1703 128 76 30 chr17 39503846 39503933 -50000620 - MER2 DNA MER2_type -260 84 2 2238 97 6 31 chr17 39504582 39504903 -49999650 + AluSp SINE Alu 1 313 0 2079 106 64 0 chr17 39504930 39505213 -49999340 - AluSx SINE Alu -11 301 1 279 214 152 45 chr17 39505419 39505531 -49999022 - MER104 DNA Tc2 -51 129 6 2246 119 0 3 chr17 39506216 39506519 -49998034 - AluSx SINE Alu -10 302 1 23 0 0 0 chr17 39506887 39506910 -49997643 + AT_rich Low_complexity Low_complexity 1 23 0 2008 108 54 4 chr17 39507418 39507696 -49996857 - AluSx SINE Alu -20 292 1 2185 95 14 3 chr17 39507763 39508048 -49996505 + AluSp SINE Alu 10 297 -16 185 65 32 0 chr17 39508909 39508940 -49995613 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 2280 107 0 0 chr17 39509020 39509320 -49995233 + AluSx SINE Alu 1 300 -12 598 234 145 21 chr17 39509327 39509617 -49994936 + L1ME4a LINE L1 5572 5897 -224 2282 94 0 10 chr17 39509752 39510050 -49994503 + AluSx SINE Alu 1 295 -17 1840 153 3 7 chr17 39510302 39510596 -49993957 - AluSx SINE Alu -19 293 1 2477 99 0 0 chr17 39510620 39510933 -49993620 - AluSq SINE Alu 0 313 1 21 36 0 0 chr17 39513416 39513444 -49991109 + GC_rich Low_complexity Low_complexity 1 28 0 269 229 0 21 chr17 39513535 39513631 -49990922 + (CCG)n Simple_repeat Simple_repeat 2 95 0 201 39 0 0 chr17 39513841 39513867 -49990686 + (CCCG)n Simple_repeat Simple_repeat 3 28 0 21 0 0 0 chr17 39513982 39514003 -49990550 + GC_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr17 39514377 39514407 -49990146 + GC_rich Low_complexity Low_complexity 1 30 0 2352 81 0 7 chr17 39515331 39515629 -49988924 + AluSq SINE Alu 1 296 -17 2146 94 14 0 chr17 39515805 39516092 -49988461 + AluSx SINE Alu 1 291 -21 1685 119 0 0 chr17 39516242 39516478 -49988075 + AluSq SINE Alu 1 236 -77 2569 48 0 0 chr17 39516545 39516840 -49987713 - AluY SINE Alu -16 295 1 210 71 0 0 chr17 39517217 39517245 -49987308 + (CTAAT)n Simple_repeat Simple_repeat 3 30 0 201 103 51 0 chr17 39517245 39517284 -49987269 + (CAATA)n Simple_repeat Simple_repeat 5 45 0 1579 58 11 0 chr17 39518013 39518204 -49986349 + AluY SINE Alu 1 193 -118 426 102 0 0 chr17 39518204 39518263 -49986290 + AluY SINE Alu 236 294 -18 2268 114 3 0 chr17 39518588 39518885 -49985668 + AluSx SINE Alu 1 298 -14 585 111 111 0 chr17 39518925 39519015 -49985538 + AluJb SINE Alu 19 118 -194 207 257 95 27 chr17 39519471 39519545 -49985008 + L2 LINE L2 3134 3212 -60 867 127 16 0 chr17 39519640 39519766 -49984787 - FLAM_C SINE Alu -5 128 1 25 51 0 0 chr17 39519808 39519847 -49984706 + AT_rich Low_complexity Low_complexity 1 39 0 1967 118 7 4 chr17 39520136 39520406 -49984147 + AluSx SINE Alu 23 293 -19 3830 47 6 12 chr17 39521746 39522238 -49982315 + L1PA8 LINE L1 5683 6171 -1 2403 73 3 0 chr17 39522371 39522674 -49981879 + AluY SINE Alu 1 304 -7 2367 84 10 3 chr17 39523261 39523570 -49980983 - AluSx SINE Alu -1 311 1 420 223 0 0 chr17 39523720 39523814 -49980739 + AluS SINE Alu 2 95 -218 746 154 16 0 chr17 39524207 39524330 -49980223 - AluSx SINE Alu -150 162 38 2264 102 3 10 chr17 39524341 39524645 -49979908 + AluSp SINE Alu 1 302 -11 993 254 76 53 chr17 39524761 39524840 -49979713 + L1MDa LINE L1 2404 2480 -4060 2114 139 7 0 chr17 39524840 39525141 -49979412 + AluSx SINE Alu 6 308 -4 993 254 76 53 chr17 39525141 39525212 -49979341 + L1MDa LINE L1 2480 2548 -3992 1852 136 9 28 chr17 39525212 39525529 -49979024 + AluSx SINE Alu 1 311 -1 993 254 76 53 chr17 39525529 39525563 -49978990 + L1MDa LINE L1 2548 2580 -3960 1889 156 0 0 chr17 39525563 39525864 -49978689 + AluJo SINE Alu 1 301 -11 1945 145 0 3 chr17 39525864 39526174 -49978379 + AluSg SINE Alu 1 309 -1 993 254 76 53 chr17 39526174 39526645 -49977908 + L1MDa LINE L1 2579 3076 -3464 1306 113 10 21 chr17 39526645 39526839 -49977714 - AluSg/x SINE Alu -13 297 106 396 165 53 83 chr17 39526857 39526903 -49977650 + L1MD1 LINE L1 5317 5363 -879 682 160 0 0 chr17 39526903 39527009 -49977544 + U6 snRNA snRNA 2 107 0 396 165 53 83 chr17 39527009 39527095 -49977458 + L1MD1 LINE L1 5363 5445 -797 887 189 136 45 chr17 39527103 39527374 -49977179 + AluJo SINE Alu 21 313 0 1040 197 132 62 chr17 39527376 39527622 -49976931 + L1MD1 LINE L1 5433 5660 -582 198 0 0 0 chr17 39527622 39527644 -49976909 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1674 128 45 0 chr17 39527649 39527915 -49976638 - AluSx SINE Alu -34 278 1 1040 197 132 62 chr17 39527915 39528060 -49976493 + L1MD1 LINE L1 5663 6045 -197 286 95 0 0 chr17 39528059 39528101 -49976452 + L1M4c LINE L1 17 58 -6326 * 1840 88 4 0 chr17 39528101 39528350 -49976203 + AluSp SINE Alu 63 312 -1 2319 209 29 31 chr17 39528370 39528711 -49975842 + L1 LINE L1 4432 4773 -1373 2249 105 0 0 chr17 39528711 39529017 -49975536 + AluSp SINE Alu 2 307 -6 2319 209 29 31 chr17 39529017 39529264 -49975289 + L1 LINE L1 4773 5019 -1127 2709 3 0 0 chr17 39529276 39529576 -49974977 + AluYa5 SINE Alu 1 300 -11 2068 99 0 3 chr17 39529588 39529903 -49974650 + AluY SINE Alu 1 314 0 2087 106 10 0 chr17 39530156 39530458 -49974095 + AluSg SINE Alu 1 305 -5 181 289 116 66 chr17 39530778 39530899 -49973654 + L2 LINE L2 2944 3070 -202 184 333 50 0 chr17 39530950 39531010 -49973543 - L2 LINE L2 -5 3267 3205 435 349 74 0 chr17 39531087 39531236 -49973317 + L2 LINE L2 3113 3272 0 2453 84 27 7 chr17 39531560 39532004 -49972549 + L1P3 LINE L1 5148 5593 -561 717 105 0 9 chr17 39532276 39532381 -49972172 + L1P3 LINE L1 5598 5701 -453 188 200 22 0 chr17 39532681 39532726 -49971827 - MIR SINE MIR -94 168 123 467 287 35 14 chr17 39533317 39533460 -49971093 + MIR SINE MIR 47 192 -70 551 217 17 0 chr17 39533488 39533608 -49970945 + MER20 DNA MER1_type 98 219 0 461 297 21 14 chr17 39533618 39533763 -49970790 + MIR SINE MIR 20 165 -97 2856 3 0 0 chr17 39533763 39534078 -49970475 + AluYb8 SINE Alu 1 315 -3 1952 114 7 17 chr17 39534099 39534235 -49970318 + AluSx SINE Alu 1 137 -175 2082 110 0 3 chr17 39534235 39534526 -49970027 + AluSc SINE Alu 1 290 -19 1952 114 7 17 chr17 39534526 39534688 -49969865 + AluSx SINE Alu 137 296 -16 1760 151 7 7 chr17 39534951 39535255 -49969298 + AluJb SINE Alu 1 304 -8 2234 94 0 0 chr17 39535260 39535568 -49968985 + AluY SINE Alu 1 308 -3 1911 123 10 13 chr17 39535602 39535902 -49968651 + AluSg SINE Alu 2 300 -10 1995 118 0 0 chr17 39536005 39536304 -49968249 - AluSg SINE Alu 0 299 1 186 43 0 0 chr17 39536407 39536430 -49968123 + (A)n Simple_repeat Simple_repeat 1 23 0 854 190 12 0 chr17 39536435 39536598 -49967955 + FRAM SINE Alu 1 164 -12 1222 287 90 41 chr17 39536599 39536733 -49967820 + L1MEc LINE L1 1023 1149 -5247 2201 95 7 3 chr17 39536733 39537038 -49967515 + AluSp SINE Alu 1 306 -7 1222 287 90 41 chr17 39537038 39537859 -49966694 + L1MEc LINE L1 1149 2025 -4371 1117 234 86 16 chr17 39537916 39538287 -49966266 + L1MB7 LINE L1 4936 5332 -814 1820 102 75 17 chr17 39538287 39538580 -49965973 + AluSg SINE Alu 1 310 0 2422 210 86 7 chr17 39538580 39539185 -49965368 + L1MB7 LINE L1 5426 6078 -106 241 302 52 0 chr17 39539188 39539304 -49965249 + L1MEc LINE L1 2272 2393 -4003 1769 149 0 23 chr17 39539305 39539627 -49964926 + AluSx SINE Alu 1 312 0 1145 246 109 62 chr17 39539644 39540044 -49964509 + L1MEc LINE L1 2445 2825 -3390 1838 133 0 18 chr17 39540044 39540329 -49964224 + AluSx SINE Alu 1 280 -32 811 86 31 0 chr17 39540329 39540457 -49964096 + (AAATG)n Simple_repeat Simple_repeat 2 133 0 1145 246 109 62 chr17 39540457 39540604 -49963949 + L1MEc LINE L1 2825 2964 -3251 4084 137 21 6 chr17 39540604 39541230 -49963323 + MER41B LTR ERV1 1 635 0 1145 246 109 62 chr17 39541230 39541769 -49962784 + L1MEc LINE L1 2964 3850 -2365 1366 130 49 37 chr17 39541772 39542018 -49962535 + AluSx SINE Alu 1 249 -63 405 224 164 11 chr17 39542031 39542214 -49962339 + L1MEc LINE L1 3836 4046 -2169 569 259 22 0 chr17 39542224 39542359 -49962194 + MER74A LTR ERVL 421 558 0 2261 224 121 57 chr17 39542362 39542746 -49961807 + L1MEc LINE L1 4064 4422 -1809 1776 139 42 0 chr17 39542746 39543034 -49961519 + AluSx SINE Alu 1 300 -12 2261 224 121 57 chr17 39543034 39543765 -49960788 + L1MEc LINE L1 4422 5290 -941 2199 33 44 0 chr17 39543765 39544076 -49960477 + AluY SINE Alu 1 323 0 2261 224 121 57 chr17 39544076 39544323 -49960230 + L1MEc LINE L1 5290 5520 -711 2205 266 65 42 chr17 39544319 39545412 -49959141 + L1MEc LINE L1 44 1161 -5235 * 304 333 52 33 chr17 39545420 39545573 -49958980 + L1MEc LINE L1 1213 1368 -5028 1219 186 62 69 chr17 39545602 39545739 -49958814 + AluJb SINE Alu 1 137 -165 203 0 37 0 chr17 39545739 39545766 -49958787 + (CA)n Simple_repeat Simple_repeat 1 28 0 2227 87 7 0 chr17 39545774 39546073 -49958480 + AluSp SINE Alu 1 301 -12 1219 186 62 69 chr17 39546073 39546217 -49958336 + AluJb SINE Alu 144 289 -13 634 279 18 14 chr17 39546275 39546550 -49958003 + L1MEc LINE L1 2355 2629 -3586 725 196 21 21 chr17 39546565 39546708 -49957845 + AluJo SINE Alu 2 144 -168 1935 119 0 0 chr17 39546708 39546985 -49957568 + AluSx SINE Alu 1 277 -35 1047 221 130 32 chr17 39546985 39547291 -49957262 + L1MEc LINE L1 2641 2915 -3300 1972 103 4 4 chr17 39547291 39547572 -49956981 + AluSg1 SINE Alu 1 281 -28 239 54 27 0 chr17 39547572 39547609 -49956944 + (CATAA)n Simple_repeat Simple_repeat 4 41 0 1047 221 130 32 chr17 39547609 39547807 -49956746 + L1MEc LINE L1 2914 3196 -3019 1125 221 42 35 chr17 39547822 39548111 -49956442 + L1MDa LINE L1 2 292 -6248 1887 124 30 0 chr17 39548112 39548411 -49956142 + AluSq SINE Alu 1 308 -5 520 179 24 140 chr17 39548411 39548618 -49955935 + L1MDa LINE L1 996 1178 -5362 446 103 0 0 chr17 39548618 39548713 -49955840 - AluSc SINE Alu 0 318 224 1346 150 12 8 chr17 39548827 39549074 -49955479 - AluSc SINE Alu -61 248 1 293 296 127 42 chr17 39549268 39549481 -49955072 - MIR SINE MIR -29 233 3 2071 100 0 7 chr17 39549539 39549828 -49954725 + AluY SINE Alu 1 287 -24 624 196 0 0 chr17 39549909 39550016 -49954537 - FLAM_A SINE Alu -17 125 19 2105 104 3 0 chr17 39550175 39550474 -49954079 - AluSg SINE Alu -10 300 1 357 267 78 0 chr17 39550852 39550942 -49953611 + MER117 DNA MER1_type 4 100 -97 252 325 131 25 chr17 39550944 39551218 -49953335 - L2 LINE L2 -1221 2093 1791 302 359 124 34 chr17 39551406 39551793 -49952760 - L2 LINE L2 -1906 1408 987 614 207 25 0 chr17 39552483 39552604 -49951949 + MLT1C LTR MaLR 344 467 0 231 211 125 77 chr17 39552671 39552775 -49951778 - MER113 DNA MER1_type? -7 514 406 2953 154 15 8 chr17 39552798 39553279 -49951274 + MER1A DNA MER1_type 46 529 0 572 220 0 32 chr17 39553494 39553680 -49950873 + (CA)n Simple_repeat Simple_repeat 1 180 0 308 225 20 7 chr17 39554208 39554359 -49950194 + CT-rich Low_complexity Low_complexity 2 154 0 258 116 0 0 chr17 39554684 39554727 -49949826 + (TGGGGG)n Simple_repeat Simple_repeat 4 46 0 1529 165 109 26 chr17 39555532 39555872 -49948681 + THE1C LTR MaLR 7 374 -1 330 26 0 0 chr17 39555977 39556016 -49948537 + (CCCCAG)n Simple_repeat Simple_repeat 3 41 0 1790 190 24 3 chr17 39556335 39556672 -49947881 + MER2 DNA MER2_type 1 344 0 227 313 82 61 chr17 39557707 39557854 -49946699 - MIR SINE MIR -19 243 94 181 264 48 96 chr17 39557834 39557959 -49946594 + MIR SINE MIR 18 136 -72 * 2139 93 36 0 chr17 39558827 39559128 -49945425 + AluSx SINE Alu 1 312 0 1112 141 180 12 chr17 39559731 39559987 -49944566 + AluJb SINE Alu 2 300 -2 292 261 33 22 chr17 39561691 39561783 -49942770 - MIR SINE MIR -51 211 119 414 277 80 15 chr17 39562434 39562571 -49941982 - MIR SINE MIR -65 197 52 225 299 30 0 chr17 39563261 39563328 -49941225 - L3b LINE CR1 -190 1393 1325 353 303 42 8 chr17 39563436 39563555 -49940998 - L2 LINE L2 -215 3057 2935 193 253 141 40 chr17 39563758 39563857 -49940696 - L2 LINE L2 -19 3253 3145 243 159 130 0 chr17 39564168 39564237 -49940316 + L1ME4a LINE L1 5999 6076 -45 2291 82 0 3 chr17 39564237 39564540 -49940013 - AluY SINE Alu -9 302 1 781 129 21 57 chr17 39564556 39564696 -49939857 - AluSq/x SINE Alu -177 136 2 2151 125 0 0 chr17 39564732 39565036 -49939517 + AluSx SINE Alu 1 304 -8 1234 39 7 0 chr17 39565046 39565200 -49939353 + AluY SINE Alu 150 304 -7 237 125 100 0 chr17 39565290 39565330 -49939223 - MIR SINE MIR -93 169 126 945 176 31 11 chr17 39565343 39565571 -49938982 - AluJo SINE Alu -26 286 2 860 191 0 0 chr17 39565577 39565729 -49938824 - FRAM SINE Alu -4 172 21 447 307 16 8 chr17 39565732 39565859 -49938694 - MIR SINE MIR -127 135 8 933 180 0 0 chr17 39566337 39566498 -49938055 + FRAM SINE Alu 10 170 -6 736 279 88 9 chr17 39566833 39567059 -49937494 - MIR SINE MIR -10 252 9 2219 92 0 10 chr17 39567119 39567425 -49937128 - AluY SINE Alu -8 303 1 1848 140 48 0 chr17 39568460 39568753 -49935800 - AluSp SINE Alu -6 307 1 2055 118 0 0 chr17 39568756 39569045 -49935508 - AluSx SINE Alu -22 290 2 189 284 49 49 chr17 39569749 39569830 -49934723 + L2 LINE L2 3187 3267 -5 361 184 26 13 chr17 39569869 39569945 -49934608 + MIR SINE MIR 72 148 -114 247 278 35 78 chr17 39570577 39570692 -49933861 + MIR SINE MIR 25 134 -74 343 314 13 59 chr17 39570776 39570929 -49933624 + MIR SINE MIR 97 242 -20 2167 220 123 105 chr17 39571650 39572438 -49932115 - HAL1 LINE L1 -1 2506 1734 1881 123 19 29 chr17 39572438 39572614 -49931939 - AluSq SINE Alu -1 312 139 2410 71 3 0 chr17 39572614 39572924 -49931629 - AluY SINE Alu 0 311 1 1881 123 19 29 chr17 39572924 39573057 -49931496 - AluSq SINE Alu -174 139 6 2167 220 123 105 chr17 39573057 39573121 -49931432 - HAL1 LINE L1 -773 1734 1673 2214 70 7 13 chr17 39573121 39573422 -49931131 - AluSg1 SINE Alu -10 299 1 2167 220 123 105 chr17 39573422 39573592 -49930961 - HAL1 LINE L1 -834 1673 1508 2273 101 7 0 chr17 39573592 39573899 -49930654 - AluSc SINE Alu 0 309 1 2167 220 123 105 chr17 39573899 39574285 -49930268 - HAL1 LINE L1 -999 1508 1070 467 261 127 37 chr17 39574296 39574541 -49930012 - HAL1 LINE L1 -1596 911 645 306 276 123 0 chr17 39574540 39574703 -49929850 + L1ME LINE L1 1380 1562 -5072 * 1927 127 82 111 chr17 39574741 39575181 -49929372 - Tigger2a DNA MER2_type -7 427 1 1085 250 77 33 chr17 39575187 39575374 -49929179 + L1ME LINE L1 1526 1703 -5122 1784 141 87 4 chr17 39575374 39575650 -49928903 + AluSq SINE Alu 1 299 -14 1085 250 77 33 chr17 39575650 39576054 -49928499 + L1ME LINE L1 1703 2318 -4507 456 193 83 7 chr17 39576061 39576206 -49928347 + L1ME LINE L1 2546 2701 -4124 645 265 121 0 chr17 39576212 39576461 -49928092 + L1ME LINE L1 2761 3039 -3605 1000 160 47 12 chr17 39576461 39576630 -49927923 + AluJb SINE Alu 1 175 -137 625 189 14 0 chr17 39576669 39576817 -49927736 + L1ME LINE L1 3260 3409 -3235 195 42 0 0 chr17 39576837 39576861 -49927692 + (TCTA)n Simple_repeat Simple_repeat 2 25 0 336 213 149 0 chr17 39576864 39576958 -49927595 - L1MEc LINE L1 -4154 2242 2135 441 228 32 14 chr17 39577022 39577147 -49927406 + L1MC4 LINE L1 6603 6703 -1339 1815 109 33 88 chr17 39577248 39577578 -49926975 - AluSx SINE Alu 0 312 1 2101 119 10 3 chr17 39577664 39577959 -49926594 - AluSq SINE Alu -15 298 2 601 207 26 0 chr17 39577960 39578076 -49926477 - MLT1A2 LTR MaLR -255 119 1 1404 235 115 22 chr17 39578076 39578210 -49926343 + L1ME LINE L1 3565 3685 -2959 2260 106 10 0 chr17 39578210 39578512 -49926041 + AluSx SINE Alu 3 307 -5 1404 235 115 22 chr17 39578512 39578874 -49925679 + L1ME LINE L1 3685 4107 -2537 359 212 13 99 chr17 39578890 39579041 -49925512 + L1ME LINE L1 4731 4868 -1776 232 323 109 35 chr17 39579081 39579100 -49925453 + MIR SINE MIR 18 34 -228 2092 128 10 3 chr17 39579100 39579389 -49925164 + AluSg SINE Alu 1 291 -19 232 323 109 35 chr17 39579389 39579570 -49924983 + MIR SINE MIR 34 233 -29 201 261 162 21 chr17 39580323 39580465 -49924088 - L3b LINE CR1 -130 1453 1292 286 266 145 12 chr17 39582675 39582842 -49921711 - MIR SINE MIR -56 206 18 2155 137 7 0 chr17 39583352 39583529 -49921024 - AluSq SINE Alu -5 308 127 405 0 0 0 chr17 39583529 39583574 -49920979 + (TG)n Simple_repeat Simple_repeat 2 46 0 2155 137 7 0 chr17 39583574 39583702 -49920851 - AluSq SINE Alu -186 127 1 290 308 37 0 chr17 39584076 39584183 -49920370 + MIR SINE MIR 118 228 -34 295 307 43 37 chr17 39584545 39584708 -49919845 - MIR SINE MIR -71 191 28 1742 182 35 0 chr17 39587045 39587331 -49917222 + AluJo SINE Alu 6 301 -11 357 65 65 0 chr17 39588077 39588139 -49916414 - L1MA7 LINE L1 0 6291 6226 388 325 83 0 chr17 39589364 39589521 -49915032 - L2 LINE L2 -13 3300 3131 335 321 145 0 chr17 39590628 39590759 -49913794 + MER91A DNA MER1_type 1 150 -46 2431 107 0 10 chr17 39590830 39591140 -49913413 - AluSx SINE Alu -5 307 1 222 315 103 12 chr17 39591405 39591570 -49912983 + L3 LINE CR1 1385 1564 -13 316 338 104 9 chr17 39592018 39592249 -49912304 - L2 LINE L2 -1415 1899 1647 434 333 163 12 chr17 39592693 39593203 -49911350 - L2 LINE L2 -2 3270 2686 31 26 0 0 chr17 39593997 39594035 -49910518 + AT_rich Low_complexity Low_complexity 1 38 0 243 256 149 36 chr17 39595315 39595483 -49909070 + L1ME LINE L1 5653 5839 -282 2034 162 3 0 chr17 39595610 39595913 -49908640 + AluSx SINE Alu 1 304 -8 1065 107 53 91 chr17 39595916 39596103 -49908450 + AluJb SINE Alu 132 311 -1 470 256 44 19 chr17 39596728 39596888 -49907665 + MIR SINE MIR 30 193 -69 356 231 44 0 chr17 39596896 39596987 -49907566 + L1MB7 LINE L1 6085 6179 -5 316 148 98 0 chr17 39597771 39597832 -49906721 - MER5A DNA MER1_type -119 70 4 2258 112 0 0 chr17 39597879 39598174 -49906379 + AluSx SINE Alu 1 295 -17 1806 101 122 35 chr17 39598429 39598716 -49905837 - AluSx SINE Alu 0 312 1 319 311 107 33 chr17 39598819 39599003 -49905550 + MIR SINE MIR 6 198 -63 725 179 0 0 chr17 39600639 39600762 -49903791 + FLAM_C SINE Alu 1 123 -20 256 347 63 42 chr17 39601438 39601628 -49902925 - L2 LINE L2 -181 3091 2898 1713 158 8 4 chr17 39603317 39603582 -49900971 + AluJo SINE Alu 1 266 -46 376 324 63 39 chr17 39603724 39603931 -49900622 - MIR SINE MIR -28 234 23 1607 179 90 0 chr17 39604157 39604436 -49900117 + AluJo SINE Alu 1 304 -8 513 176 0 11 chr17 39604441 39604532 -49900021 + 5S rRNA rRNA 1 90 -31 1752 175 29 29 chr17 39604639 39604947 -49899606 + AluJb SINE Alu 1 308 -4 21 0 0 0 chr17 39604980 39605001 -49899552 + AT_rich Low_complexity Low_complexity 1 21 0 5291 148 42 15 chr17 39605048 39605844 -49898709 + L1MA5 LINE L1 4518 5291 -1009 2205 108 30 0 chr17 39605844 39606139 -49898414 + AluSq SINE Alu 1 304 -9 5291 148 42 15 chr17 39606139 39607074 -49897479 + L1MA5 LINE L1 5291 6299 -1 2278 119 0 0 chr17 39607192 39607502 -49897051 - AluSx SINE Alu -2 310 1 2007 105 35 0 chr17 39607652 39607938 -49896615 - AluJb SINE Alu -12 300 5 2429 70 10 0 chr17 39607952 39608252 -49896301 - AluSx SINE Alu -9 303 1 228 200 33 0 chr17 39608872 39608932 -49895621 + (CCCG)n Simple_repeat Simple_repeat 3 64 0 549 158 53 0 chr17 39609754 39609868 -49894685 - MER96 DNA MER1_type? -50 125 6 278 295 98 16 chr17 39610211 39610333 -49894220 + MIR SINE MIR 51 182 -80 1001 166 0 25 chr17 39610801 39610964 -49893589 + FRAM SINE Alu 1 158 -18 2128 141 0 3 chr17 39610968 39611272 -49893281 + AluSx SINE Alu 1 303 -9 1899 164 0 10 chr17 39611296 39611607 -49892946 + AluJb SINE Alu 3 310 -2 2430 61 3 3 chr17 39611836 39612129 -49892424 + AluSc SINE Alu 1 293 -16 871 250 151 60 chr17 39613869 39614074 -49890479 + L1ME1 LINE L1 1619 1804 -4592 2504 87 0 3 chr17 39614074 39614386 -49890167 - AluSx SINE Alu -1 311 1 871 250 151 60 chr17 39614386 39614767 -49889786 + L1ME1 LINE L1 1804 2270 -4126 2274 115 3 0 chr17 39614767 39615072 -49889481 + AluSx SINE Alu 2 307 -5 871 250 151 60 chr17 39615072 39615121 -49889432 + L1ME1 LINE L1 2270 2313 -4083 1046 121 7 0 chr17 39615122 39615263 -49889290 - AluSq/x SINE Alu -171 142 1 1074 213 55 82 chr17 39615263 39615551 -49889002 + L1ME1 LINE L1 2667 2942 -3273 627 209 0 8 chr17 39615551 39615680 -49888873 + FLAM_A SINE Alu 1 128 -5 1074 213 55 82 chr17 39615680 39615791 -49888762 + L1ME1 LINE L1 2942 3055 -3160 978 191 59 15 chr17 39615817 39616021 -49888532 + MER20 DNA MER1_type 1 213 -6 495 201 137 5 chr17 39616028 39616232 -49888321 + L1ME1 LINE L1 3100 3330 -2885 909 231 22 15 chr17 39616243 39616396 -49888157 + L1ME1 LINE L1 4574 4731 -1484 2108 124 3 3 chr17 39616396 39616695 -49887858 + AluSg SINE Alu 4 302 -8 909 231 22 15 chr17 39616695 39616809 -49887744 + L1ME1 LINE L1 4731 4843 -1372 2058 140 7 0 chr17 39616864 39617164 -49887389 + AluSx SINE Alu 1 302 -10 420 202 53 0 chr17 39617164 39617258 -49887295 - FLAM_A SINE Alu -27 115 17 407 237 88 0 chr17 39617258 39617372 -49887181 + L1ME1 LINE L1 4833 4956 -1259 954 163 0 67 chr17 39617377 39617555 -49886998 + AluJo SINE Alu 115 280 -32 2934 206 41 42 chr17 39617580 39618465 -49886088 + L1ME1 LINE L1 5041 6015 -220 2463 88 0 0 chr17 39618465 39618761 -49885792 + AluSc SINE Alu 1 296 -13 2934 206 41 42 chr17 39618761 39618878 -49885675 + L1ME1 LINE L1 6015 6131 -104 1882 215 73 104 chr17 39619377 39620207 -49884346 + LTR1B LTR ERV1 1 972 -48 481 263 68 38 chr17 39620244 39620378 -49884175 + LTR28 LTR ERV1 688 1019 -1 14844 202 58 52 chr17 39620513 39621449 -49883104 + HUERS-P2 LTR ERV1 75 1004 -5960 2189 115 3 0 chr17 39621449 39621744 -49882809 - AluSg SINE Alu -14 296 1 14844 202 58 52 chr17 39621744 39624638 -49879915 + HUERS-P2 LTR ERV1 1004 4055 -2909 5446 108 16 16 chr17 39624637 39625431 -49879122 + LTR1B-int LTR ERV1 5808 6601 -490 * 2127 155 11 3 chr17 39625429 39625783 -49878770 + LTR1B-int LTR ERV1 6734 7090 -1 * 1786 198 75 128 chr17 39625785 39626572 -49877981 + LTR1B LTR ERV1 1 745 -81 444 284 67 37 chr17 39626626 39626760 -49877793 + LTR28 LTR ERV1 688 1019 -1 227 219 110 0 chr17 39626826 39626899 -49877654 + MIR SINE MIR 12 92 -170 1467 164 25 25 chr17 39627172 39627490 -49877063 - AluJo SINE Alu 0 318 1 1950 133 0 31 chr17 39628632 39628949 -49875604 + AluJb SINE Alu 6 312 0 1617 164 70 3 chr17 39629221 39629507 -49875046 - AluSx SINE Alu -7 305 1 459 157 0 0 chr17 39629676 39629765 -49874788 + CT-rich Low_complexity Low_complexity 2 90 0 2020 123 0 3 chr17 39632637 39633106 -49871447 - AluSx SINE Alu 0 312 1 253 344 0 0 chr17 39634303 39634367 -49870186 + HAL1 LINE L1 792 855 -1652 2047 123 13 0 chr17 39634376 39634678 -49869875 + AluSx SINE Alu 1 306 -6 1121 293 79 51 chr17 39634691 39634744 -49869809 + HAL1 LINE L1 1032 1082 -1425 609 164 136 0 chr17 39634744 39634854 -49869699 + FLAM_C SINE Alu 2 126 -7 1121 293 79 51 chr17 39634854 39635644 -49868909 + HAL1 LINE L1 1082 1899 -608 1308 94 0 6 chr17 39636439 39636620 -49867933 - AluSg SINE Alu -130 180 1 355 267 78 0 chr17 39636998 39637088 -49867465 + MER117 DNA MER1_type 4 100 -97 244 336 128 22 chr17 39637090 39637364 -49867189 - L2 LINE L2 -1221 2093 1791 251 367 122 35 chr17 39637552 39637980 -49866573 - L2 LINE L2 -1906 1408 944 627 198 25 0 chr17 39638629 39638750 -49865803 + MLT1C LTR MaLR 344 467 0 3006 139 15 8 chr17 39638944 39639425 -49865128 + MER1A DNA MER1_type 46 529 0 282 56 0 0 chr17 39639623 39639659 -49864894 + (CA)n Simple_repeat Simple_repeat 2 37 0 272 231 20 7 chr17 39640174 39640321 -49864232 + CT-rich Low_complexity Low_complexity 2 150 0 258 116 0 0 chr17 39640647 39640690 -49863863 + (TGGGGG)n Simple_repeat Simple_repeat 4 46 0 1481 165 109 26 chr17 39641495 39641835 -49862718 + THE1C LTR MaLR 7 374 -1 243 61 0 0 chr17 39641940 39641973 -49862580 + (CCCCAG)n Simple_repeat Simple_repeat 3 35 0 1963 188 12 3 chr17 39642292 39642633 -49861920 + MER2 DNA MER2_type 1 344 0 246 313 82 61 chr17 39643668 39643815 -49860738 - MIR SINE MIR -19 243 94 182 272 48 96 chr17 39643795 39643920 -49860633 + MIR SINE MIR 18 136 -72 * 1059 317 37 12 chr17 39648531 39649209 -49855344 + L1MC4 LINE L1 5479 6164 -1621 543 241 29 105 chr17 39654307 39654449 -49850104 - L1MD3 LINE L1 0 7995 7889 1630 164 0 27 chr17 39654449 39654748 -49849805 + AluJo SINE Alu 1 291 -21 543 241 29 105 chr17 39654748 39654920 -49849633 - L1MD3 LINE L1 -106 7889 7705 356 287 0 41 chr17 39655808 39655930 -49848623 - L2 LINE L2 -740 2574 2458 309 276 24 16 chr17 39656348 39656475 -49848078 + MER113 DNA MER1_type? 14 141 -380 1770 166 3 7 chr17 39658615 39658922 -49845631 - AluJo SINE Alu -6 306 1 403 286 41 14 chr17 39659846 39659993 -49844560 + MIR SINE MIR 47 197 -65 556 217 17 0 chr17 39660016 39660136 -49844417 + MER20 DNA MER1_type 98 219 0 452 310 14 7 chr17 39660146 39660291 -49844262 + MIR SINE MIR 20 165 -97 2745 19 0 0 chr17 39660291 39660604 -49843949 + AluYb8 SINE Alu 1 313 -5 292 242 0 0 chr17 39660614 39660680 -49843873 + L1MD2 LINE L1 4820 4885 -1261 312 49 39 0 chr17 39660680 39660737 -49843816 + MER41A LTR ERV1 418 478 -76 3950 166 57 25 chr17 39660741 39661935 -49842618 + L1MA9 LINE L1 4873 6114 -198 561 277 73 56 chr17 39661536 39662021 -49842532 + L1MD2 LINE L1 5695 6312 0 * 312 279 91 91 chr17 39662322 39662468 -49842085 + L1ME4a LINE L1 5572 5717 -404 1063 214 41 23 chr17 39662468 39662688 -49841865 + MER58A DNA MER1_type 1 224 0 312 279 91 91 chr17 39662688 39663090 -49841463 + L1ME4a LINE L1 5716 6120 -1 687 254 94 9 chr17 39663953 39664177 -49840376 + MIR SINE MIR 9 251 -11 310 289 104 39 chr17 39664249 39664606 -49839947 + L1ME4a LINE L1 5575 5954 -167 406 322 94 0 chr17 39664663 39664843 -49839710 + MIR SINE MIR 63 259 -3 1744 124 0 29 chr17 39664964 39665238 -49839315 - AluSx SINE Alu -17 295 30 187 278 42 0 chr17 39665448 39665520 -49839033 - MIR SINE MIR -56 206 132 26 0 0 0 chr17 39666281 39666307 -49838246 + AT_rich Low_complexity Low_complexity 1 26 0 227 267 122 76 chr17 39666605 39666736 -49837817 - MIR SINE MIR -82 180 44 203 350 17 0 chr17 39666739 39666799 -49837754 - MIR SINE MIR -185 77 17 2395 78 0 0 chr17 39666951 39667258 -49837295 - AluY SINE Alu -4 307 1 1717 166 3 0 chr17 39667260 39667543 -49837010 - AluSx SINE Alu -17 295 12 318 258 22 0 chr17 39668001 39668090 -49836463 - L1MC4 LINE L1 -141 7901 7811 1991 117 0 0 chr17 39668090 39668372 -49836181 - AluSx SINE Alu -15 297 16 404 246 97 26 chr17 39668386 39668581 -49835972 - L1MC4a LINE L1 -566 7242 7034 2053 125 0 16 chr17 39668584 39668895 -49835658 - AluSc SINE Alu -3 306 1 2088 131 0 10 chr17 39668905 39669210 -49835343 - AluSg SINE Alu -8 302 1 549 177 21 0 chr17 39669211 39669307 -49835246 - AluJb SINE Alu -12 300 203 1339 132 0 10 chr17 39669309 39669513 -49835040 - AluSq SINE Alu -79 234 33 2150 117 0 0 chr17 39669555 39669863 -49834690 - AluSg1 SINE Alu -1 308 1 2917 137 15 28 chr17 39670014 39670487 -49834066 - MLT1C LTR MaLR 0 467 1 918 198 86 0 chr17 39670779 39670976 -49833577 - AluJb SINE Alu -7 305 92 202 234 0 0 chr17 39670983 39671030 -49833523 + T-rich Low_complexity Low_complexity 1 47 0 565 243 43 16 chr17 39671077 39671262 -49833291 - L1MC5 LINE L1 -461 7500 7311 627 205 139 12 chr17 39671375 39671541 -49833012 + MER20 DNA MER1_type 33 219 0 848 174 61 88 chr17 39671556 39671850 -49832703 - L1MC5 LINE L1 -770 7191 6906 1540 199 6 10 chr17 39671851 39672163 -49832390 - AluJb SINE Alu 0 312 2 381 244 64 45 chr17 39672221 39672377 -49832176 - L1MC4 LINE L1 -1073 6969 6811 2116 114 0 3 chr17 39672857 39673163 -49831390 - AluSg SINE Alu -5 305 1 1361 175 77 25 chr17 39673918 39674204 -49830349 - AluJb SINE Alu -11 301 1 2329 84 0 0 chr17 39674236 39674532 -49830021 - AluSc SINE Alu -13 296 1 2205 135 0 3 chr17 40076699 40077011 -49427542 + AluJb SINE Alu 1 311 -1 303 287 191 0 chr17 40079749 40079864 -49424689 - L2 LINE L2 0 3313 3177 390 286 43 81 chr17 40079876 40079945 -49424608 - MIR SINE MIR -14 248 178 2457 71 3 3 chr17 40079945 40080255 -49424298 - AluY SINE Alu -1 310 1 390 286 43 81 chr17 40080255 40080395 -49424158 - MIR SINE MIR -84 178 47 345 331 53 0 chr17 40080450 40080583 -49423970 - L2 LINE L2 -210 3062 2923 386 252 205 7 chr17 40080891 40081042 -49423511 - MER5A DNA MER1_type 0 189 9 213 300 12 38 chr17 40084645 40084725 -49419828 - MIR3 SINE MIR -25 183 106 438 100 0 0 chr17 40084809 40084869 -49419684 + FRAM/FAM SINE Alu 9 68 -108 245 247 71 12 chr17 40084901 40084986 -49419567 + MIR3 SINE MIR 116 205 -3 2224 106 10 7 chr17 40085197 40085499 -49419054 - AluSx SINE Alu -9 303 1 202 279 0 33 chr17 40086660 40086721 -49417832 - MIR SINE MIR -69 139 81 363 221 0 13 chr17 40086737 40086814 -49417739 + AluJo SINE Alu 1 76 -226 439 95 0 0 chr17 40086814 40086877 -49417676 - AluJo SINE Alu -15 297 235 943 148 49 7 chr17 40086877 40087019 -49417534 - AluJo SINE Alu -152 160 13 1290 150 52 5 chr17 40087025 40087218 -49417335 + AluJo SINE Alu 76 277 -35 2409 92 0 7 chr17 40087650 40087953 -49416600 + AluSc SINE Alu 1 301 -8 192 299 38 45 chr17 40087975 40088132 -49416421 - L2 LINE L2 -286 2986 2831 2323 91 3 7 chr17 40088313 40088609 -49415944 + AluSp SINE Alu 1 295 -18 1298 106 0 11 chr17 40088625 40088804 -49415749 + AluSq SINE Alu 120 296 -17 285 195 49 49 chr17 40088981 40089063 -49415490 + L2 LINE L2 3183 3264 -49 2319 77 13 16 chr17 40089316 40089626 -49414927 + AluSx SINE Alu 1 309 -3 223 312 83 0 chr17 40089628 40089737 -49414816 - L2 LINE L2 -15 3257 3140 184 244 0 22 chr17 40089822 40089867 -49414686 - L2 LINE L2 -90 3223 3180 680 246 56 32 chr17 40090532 40090784 -49413769 - MIR SINE MIR -3 259 2 1392 136 0 68 chr17 40090805 40090979 -49413574 - AluJo SINE Alu -7 305 150 2932 10 0 0 chr17 40090979 40091290 -49413263 - AluY SINE Alu 0 311 1 1392 136 0 68 chr17 40091290 40091350 -49413203 - AluJo SINE Alu -162 150 87 207 0 0 0 chr17 40091350 40091373 -49413180 + (T)n Simple_repeat Simple_repeat 1 23 0 1584 149 0 13 chr17 40091387 40091615 -49412938 - AluJo SINE Alu -85 227 3 261 253 101 0 chr17 40092823 40092902 -49411651 + MIR SINE MIR 44 130 -78 1708 161 30 16 chr17 40092909 40093214 -49411339 - AluJb SINE Alu -3 309 1 257 240 19 39 chr17 40094592 40094696 -49409857 + CT-rich Low_complexity Low_complexity 1 102 0 * 288 333 6 13 chr17 40094655 40094811 -49409742 + C-rich Low_complexity Low_complexity 1 155 0 399 41 0 0 chr17 40095930 40095979 -49408574 + (TG)n Simple_repeat Simple_repeat 1 49 0 66 73 0 0 chr17 40096283 40096419 -49408134 + GC_rich Low_complexity Low_complexity 1 136 0 24 32 0 0 chr17 40096461 40096492 -49408061 + GC_rich Low_complexity Low_complexity 1 31 0 30 77 0 0 chr17 40096626 40096691 -49407862 + GC_rich Low_complexity Low_complexity 1 65 0 253 253 13 0 chr17 40097480 40097559 -49406994 + G-rich Low_complexity Low_complexity 5 84 0 288 232 40 40 chr17 40097833 40097984 -49406569 + (CAGAGA)n Simple_repeat Simple_repeat 6 156 0 1851 160 6 13 chr17 40098453 40098766 -49405787 - AluSx SINE Alu -1 311 1 2224 89 6 38 chr17 40099376 40099692 -49404861 - AluSq SINE Alu -7 306 1 599 258 165 0 chr17 40101069 40101251 -49403302 - MIR SINE MIR -35 227 16 184 239 42 148 chr17 40101804 40101946 -49402607 + MIR SINE MIR 18 144 -64 2332 108 0 9 chr17 40102294 40102609 -49401944 + AluSx SINE Alu 1 312 0 1188 140 0 0 chr17 40102609 40102773 -49401780 + AluSg/x SINE Alu 132 295 -15 182 319 0 0 chr17 40102773 40102820 -49401733 - L2 LINE L2 -21 3292 3246 586 229 151 21 chr17 40103645 40103837 -49400716 - MIR SINE MIR -6 256 40 21 57 0 0 chr17 40106208 40106243 -49398310 + GC_rich Low_complexity Low_complexity 1 35 0 1562 207 0 11 chr17 40106648 40106933 -49397620 - AluJb SINE Alu -30 282 1 1674 154 46 39 chr17 40106933 40107218 -49397335 - AluJo SINE Alu -15 297 11 183 42 0 0 chr17 40107603 40107627 -49396926 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 420 335 95 6 chr17 40108040 40108219 -49396334 + MIR SINE MIR 29 223 -39 1435 251 30 77 chr17 40108723 40109356 -49395197 - L1ME1 LINE L1 -310 5856 5254 722 198 0 0 chr17 40109390 40109516 -49395037 + FLAM_C SINE Alu 2 127 -16 5152 258 43 14 chr17 40109530 40111208 -49393345 - L1ME1 LINE L1 -913 5233 3508 348 309 8 40 chr17 40112969 40113095 -49391458 + MIR3 SINE MIR 72 193 -15 2262 121 0 7 chr17 40113132 40113438 -49391115 + AluSg SINE Alu 1 304 -6 4590 87 2 2 chr17 40115935 40116569 -49387984 - THE1B-int LTR MaLR -946 634 1 1756 144 18 85 chr17 40116569 40116611 -49387942 - THE1B LTR MaLR 0 364 321 207 0 0 0 chr17 40116611 40116634 -49387919 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1756 144 18 85 chr17 40116634 40116981 -49387572 - THE1B LTR MaLR -43 321 1 254 286 0 26 chr17 40117396 40117473 -49387080 - MIR3 SINE MIR -34 174 100 219 186 0 0 chr17 40118849 40118892 -49385661 - L2 LINE L2 -4 3309 3267 464 179 0 0 chr17 40119038 40119116 -49385437 - AluJ/FLAM SINE Alu -233 79 2 2256 133 10 0 chr17 40119167 40119476 -49385077 - AluSx SINE Alu 0 312 1 240 35 0 0 chr17 40119494 40119523 -49385030 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1678 197 7 0 chr17 40119525 40119804 -49384749 - AluJb SINE Alu -31 281 1 1333 161 45 98 chr17 40119810 40120172 -49384381 - L1MB7 LINE L1 -11 6173 5830 2143 207 6 28 chr17 40120172 40120669 -49383884 - MER66B LTR ERV1 0 486 1 1333 161 45 98 chr17 40120669 40120684 -49383869 - L1MB7 LINE L1 -354 5830 5816 1839 149 0 64 chr17 40120684 40121013 -49383540 - AluSx SINE Alu 0 312 5 263 202 90 11 chr17 40121366 40121455 -49383098 - MLT1J2 LTR MaLR 0 450 355 405 248 52 60 chr17 40121460 40121669 -49382884 - MLT1I LTR MaLR -140 310 71 275 312 21 0 chr17 40121713 40121806 -49382747 - MIR3 SINE MIR -110 98 4 212 319 55 11 chr17 40125356 40125447 -49379106 - L2 LINE L2 -10 3262 3168 1364 279 53 55 chr17 40126617 40126686 -49377867 - L2 LINE L2 -1 3312 3244 2192 142 0 3 chr17 40126686 40126995 -49377558 - AluSx SINE Alu -4 308 1 1364 279 53 55 chr17 40126995 40127686 -49376867 - L2 LINE L2 -69 3244 2553 206 261 0 0 chr17 40128422 40128468 -49376085 + MIR SINE MIR 161 206 -56 237 310 62 39 chr17 40128590 40128719 -49375834 - L2 LINE L2 -4 3268 3137 1746 103 0 11 chr17 40129135 40129432 -49375121 - AluY SINE Alu 0 317 24 1330 221 84 22 chr17 40129490 40129847 -49374706 - MLT1B LTR MaLR -11 379 1 265 336 69 23 chr17 40129913 40130044 -49374509 + L2 LINE L2 2956 3092 -180 2032 117 14 0 chr17 40130275 40130565 -49373988 - AluSx SINE Alu -18 294 1 209 250 0 0 chr17 40131292 40131340 -49373213 + C-rich Low_complexity Low_complexity 1 48 0 1696 113 0 79 chr17 40132530 40132822 -49371731 + AluSx SINE Alu 29 297 -15 268 288 14 0 chr17 40132823 40132896 -49371657 + MIR SINE MIR 152 225 -37 1596 108 127 19 chr17 40133307 40133575 -49370978 + AluSg1 SINE Alu 1 297 -12 1769 111 0 37 chr17 40133590 40133888 -49370665 + AluSx SINE Alu 7 293 -19 974 85 0 8 chr17 40133888 40134018 -49370535 - Tigger1 DNA MER2_type -960 1458 1330 281 193 88 0 chr17 40134021 40134078 -49370475 - AluSp SINE Alu -111 192 131 753 235 0 19 chr17 40134084 40134246 -49370307 - FRAM SINE Alu -3 163 5 2517 37 0 0 chr17 40134872 40135169 -49369384 + AluY SINE Alu 1 297 -14 1277 195 26 15 chr17 40135178 40135450 -49369103 - AluJb SINE Alu -33 279 5 3420 102 14 10 chr17 40135982 40136484 -49368069 - L1P LINE L1 -1131 5015 4512 4566 75 7 8 chr17 40136484 40137090 -49367463 + L1PA7 LINE L1 5544 6154 0 295 286 54 71 chr17 40137091 40137259 -49367294 - L2 LINE L2 -26 3287 3123 448 293 50 91 chr17 40137279 40137720 -49366833 + L2 LINE L2 2868 3290 -23 204 67 0 0 chr17 40137773 40137803 -49366750 + (TG)n Simple_repeat Simple_repeat 1 30 0 426 350 164 15 chr17 40137966 40138375 -49366178 + L2 LINE L2 2265 2734 -580 283 293 78 66 chr17 40138423 40138590 -49365963 + L2 LINE L2 2877 3045 -227 639 235 63 99 chr17 40138788 40139009 -49365544 - MIR SINE MIR -2 260 48 1988 142 0 3 chr17 40139440 40139750 -49364803 + AluSx SINE Alu 1 309 -3 276 250 159 0 chr17 40140253 40140341 -49364212 + L2 LINE L2 3208 3309 -4 1448 149 0 37 chr17 40141160 40141428 -49363125 + AluJo SINE Alu 1 258 -54 796 278 183 54 chr17 40141738 40142411 -49362142 + L2 LINE L2 2302 3047 -266 496 259 9 9 chr17 40143039 40143155 -49361398 - MIR SINE MIR -146 116 1 529 319 106 41 chr17 40143235 40143649 -49360904 - L3 LINE CR1 -99 1478 1038 439 215 118 0 chr17 40143863 40143956 -49360597 + MIR3 SINE MIR 54 157 -51 357 268 82 42 chr17 40144021 40144186 -49360367 - MIR SINE MIR -61 201 34 186 326 116 31 chr17 40144320 40144449 -49360104 + L3b LINE CR1 1238 1377 -206 441 168 11 21 chr17 40145520 40145615 -49358938 - L1M4 LINE L1 -960 5186 5093 445 67 17 0 chr17 40145618 40145678 -49358875 - AluJ/FLAM SINE Alu -250 62 2 1298 211 68 116 chr17 40145688 40145943 -49358610 - L1M4 LINE L1 -954 5192 4926 2274 87 7 0 chr17 40145943 40146243 -49358310 - AluY SINE Alu -9 302 1 1298 211 68 116 chr17 40146243 40146556 -49357997 - L1M4 LINE L1 -1220 4926 4651 * 4146 199 40 55 chr17 40146555 40146796 -49357757 - L1M4 LINE L1 -1889 4257 4014 1963 138 0 0 chr17 40146796 40147092 -49357461 - AluJb SINE Alu -16 296 1 4146 199 40 55 chr17 40147092 40147374 -49357179 - L1M4 LINE L1 -2132 4014 3729 1773 156 0 23 chr17 40147374 40147682 -49356871 - AluSx SINE Alu -11 301 1 4146 199 40 55 chr17 40147682 40148099 -49356454 - L1M4 LINE L1 -2417 3729 3307 216 0 0 0 chr17 40148099 40148123 -49356430 + (TG)n Simple_repeat Simple_repeat 1 24 0 1842 129 7 0 chr17 40148123 40148403 -49356150 - AluSx SINE Alu -30 282 1 4146 199 40 55 chr17 40148403 40148649 -49355904 - L1M4 LINE L1 -2837 3309 3086 1700 84 0 13 chr17 40149165 40149403 -49355150 + AluSq SINE Alu 77 311 -2 465 228 148 53 chr17 40149491 40149609 -49354944 + MIR SINE MIR 49 193 -69 1817 204 49 10 chr17 40149609 40150016 -49354537 - MSTB LTR MaLR 0 426 4 465 228 148 53 chr17 40150016 40150086 -49354467 + MIR SINE MIR 193 255 -7 351 287 55 66 chr17 40150095 40150276 -49354277 - MIR SINE MIR -56 206 28 565 191 127 25 chr17 40151541 40151698 -49352855 - MIR SINE MIR -70 192 20 180 0 0 0 chr17 40152727 40152747 -49351806 + (TG)n Simple_repeat Simple_repeat 2 21 0 2787 72 23 48 chr17 40152994 40153427 -49351126 + L1PA6 LINE L1 5733 6154 0 210 71 0 0 chr17 40153829 40153857 -49350696 + (GA)n Simple_repeat Simple_repeat 1 28 0 287 263 92 0 chr17 40154156 40154232 -49350321 + L2 LINE L2 3231 3313 0 354 243 0 14 chr17 40154234 40154304 -49350249 + L2 LINE L2 3204 3272 0 2356 55 0 19 chr17 40155159 40155470 -49349083 + AluY SINE Alu 1 305 -6 24 0 0 0 chr17 40157245 40157269 -49347284 + AT_rich Low_complexity Low_complexity 1 24 0 186 238 163 25 chr17 40157847 40157927 -49346626 - L2 LINE L2 -64 3249 3159 392 246 84 42 chr17 40157961 40158128 -49346425 + MER104 DNA MER2_type 4 177 -3 650 343 48 30 chr17 40158308 40158705 -49345848 - L2 LINE L2 -420 2894 2491 373 324 35 24 chr17 40161510 40161724 -49342829 + MIR SINE MIR 8 262 0 893 227 88 5 chr17 40161873 40162067 -49342486 - MIR SINE MIR -46 216 7 187 302 170 19 chr17 40162102 40162208 -49342345 - L2 LINE L2 -3 3310 3189 315 0 0 0 chr17 40167838 40167871 -49336682 + (CA)n Simple_repeat Simple_repeat 1 68 0 315 0 0 0 chr17 40167871 40167906 -49336647 + (CA)n Simple_repeat Simple_repeat 2 36 0 192 344 104 10 chr17 40169177 40169273 -49335280 - MIR3 SINE MIR -89 119 15 462 106 0 0 chr17 40169493 40169559 -49334994 - L1MB5 LINE L1 -6 6168 6103 279 0 0 0 chr17 40170811 40170842 -49333711 + (TG)n Simple_repeat Simple_repeat 1 31 0 26 50 0 0 chr17 40171055 40171095 -49333458 + GC_rich Low_complexity Low_complexity 1 40 0 182 105 26 0 chr17 40171169 40171207 -49333346 + (CCCCG)n Simple_repeat Simple_repeat 1 39 0 958 146 29 6 chr17 40173403 40173574 -49330979 - AluJb SINE Alu -51 261 87 553 324 48 9 chr17 40173740 40173950 -49330603 + MIR SINE MIR 35 252 -10 2237 91 0 3 chr17 40173957 40174264 -49330289 + AluSx SINE Alu 1 306 -6 927 161 6 52 chr17 40175764 40175938 -49328615 + FRAM SINE Alu 1 166 0 1962 106 14 3 chr17 40175968 40176254 -49328299 + AluSx SINE Alu 1 316 0 190 74 0 0 chr17 40176254 40176281 -49328272 + (TAA)n Simple_repeat Simple_repeat 2 180 0 180 0 0 0 chr17 40176288 40176308 -49328245 + (GA)n Simple_repeat Simple_repeat 1 20 0 1292 172 5 0 chr17 40176317 40176515 -49328038 - AluJb SINE Alu -27 285 87 416 239 238 1 chr17 40176522 40176711 -49327842 - MIR SINE MIR -11 251 20 871 168 0 14 chr17 40177299 40177442 -49327111 - AluJb SINE Alu -16 296 156 293 0 0 0 chr17 40177500 40177536 -49327017 + AluY SINE Alu 1 36 -266 282 264 94 71 chr17 40177728 40177940 -49326613 + L3 LINE CR1 1102 1318 -259 193 262 33 74 chr17 40178043 40178165 -49326388 + L2 LINE L2 2862 2978 -335 327 291 39 19 chr17 40178200 40178303 -49326250 + L3 LINE CR1 1323 1427 -150 508 331 73 25 chr17 40178359 40178715 -49325838 - L2 LINE L2 -62 3251 2879 1329 196 13 27 chr17 40178911 40179212 -49325341 - AluSq SINE Alu -12 301 5 2140 119 10 16 chr17 40179480 40179792 -49324761 + AluSg SINE Alu 1 310 0 21 0 0 0 chr17 40182171 40182192 -49322361 + AT_rich Low_complexity Low_complexity 1 21 0 2165 105 7 10 chr17 40183145 40183439 -49321114 + AluSg SINE Alu 3 295 -15 222 171 0 0 chr17 40184284 40184325 -49320228 + (TG)n Simple_repeat Simple_repeat 2 42 0 213 121 0 0 chr17 40184668 40184701 -49319852 + (A)n Simple_repeat Simple_repeat 1 33 0 216 369 43 7 chr17 40186611 40186752 -49317801 - L3b LINE CR1 -140 1443 1298 3453 130 46 28 chr17 40186789 40187101 -49317452 - Tigger1 DNA MER2_type -2 2416 2111 2564 60 0 3 chr17 40187101 40187402 -49317151 - AluY SINE Alu -11 300 1 3453 130 46 28 chr17 40187402 40187697 -49316856 - Tigger1 DNA MER2_type -307 2111 1798 681 172 0 39 chr17 40187700 40187828 -49316725 + FLAM_A SINE Alu 3 125 -17 1512 99 12 129 chr17 40187828 40188078 -49316475 - Tigger1 DNA MER2_type -613 1805 1602 2178 111 0 3 chr17 40188078 40188366 -49316187 - AluSx SINE Alu -19 293 7 1512 99 12 129 chr17 40188366 40188448 -49316105 - Tigger1 DNA MER2_type -816 1602 1512 180 0 0 0 chr17 40188490 40188510 -49316043 + (T)n Simple_repeat Simple_repeat 1 20 0 920 179 17 12 chr17 40188619 40188792 -49315761 - THE1B LTR MaLR -190 174 1 3730 123 2 5 chr17 40188792 40189351 -49315202 - THE1B-int LTR MaLR 0 1580 1024 213 211 42 0 chr17 40189511 40189582 -49314971 + (TA)n Simple_repeat Simple_repeat 1 74 0 211 187 0 107 chr17 40189655 40189730 -49314823 + T-rich Low_complexity Low_complexity 1 67 0 183 42 0 0 chr17 40191209 40191233 -49313320 + (A)n Simple_repeat Simple_repeat 1 24 0 192 135 0 0 chr17 40191863 40191900 -49312653 + (GGGGA)n Simple_repeat Simple_repeat 1 37 0 337 226 113 17 chr17 40192412 40192527 -49312026 + MER5A DNA MER1_type 64 189 0 852 249 23 34 chr17 40192961 40193226 -49311327 + AluJo SINE Alu 5 266 -46 2020 126 10 0 chr17 40193236 40193623 -49310930 - AluSp SINE Alu 0 390 1 521 208 179 48 chr17 40194792 40194999 -49309554 + MLT1L LTR MaLR 41 274 -341 2042 116 0 20 chr17 40195028 40195331 -49309222 + AluSx SINE Alu 14 310 -2 1689 161 34 7 chr17 40195342 40195633 -49308920 + AluJb SINE Alu 1 299 -13 2442 83 0 3 chr17 40195633 40195945 -49308608 + AluY SINE Alu 1 311 0 2111 120 0 7 chr17 40195945 40196263 -49308290 + AluSg SINE Alu 1 316 0 2424 87 7 3 chr17 40196266 40196575 -49307978 + AluSg SINE Alu 1 310 0 600 247 47 26 chr17 40196583 40196773 -49307780 + MLT1L LTR MaLR 422 615 0 380 243 59 55 chr17 40196899 40197048 -49307505 + MIR SINE MIR 1 151 -68 478 138 23 23 chr17 40197230 40197317 -49307236 - L2 LINE L2 -2 3311 3225 278 140 0 35 chr17 40197410 40197467 -49307086 - FLAM SINE Alu -22 111 57 2270 88 41 3 chr17 40197891 40198186 -49306367 + AluSx SINE Alu 1 306 -6 195 155 119 107 chr17 40198642 40198726 -49305827 - MIR SINE MIR -108 154 70 315 0 0 0 chr17 40198886 40198921 -49305632 + (TG)n Simple_repeat Simple_repeat 1 35 0 2137 113 0 3 chr17 40199105 40199424 -49305129 + AluSg SINE Alu 1 318 0 324 308 231 18 chr17 40199876 40200318 -49304235 + L2 LINE L2 1744 2279 -1035 416 327 77 70 chr17 40201173 40201773 -49302780 + L2 LINE L2 2670 3270 -2 180 0 0 0 chr17 40204176 40204196 -49300357 + (TAAAAA)n Simple_repeat Simple_repeat 5 24 0 182 179 107 18 chr17 40204867 40204923 -49299630 + L2 LINE L2 2698 2758 -556 872 233 48 12 chr17 40205503 40205752 -49298801 - MIR SINE MIR 0 262 5 205 29 29 29 chr17 40207648 40207683 -49296870 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 1498 164 29 74 chr17 40207697 40207889 -49296664 - AluJb SINE Alu -16 296 122 195 69 0 0 chr17 40207889 40207918 -49296635 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1498 164 29 74 chr17 40207918 40208035 -49296518 - AluJb SINE Alu -190 122 1 396 271 8 17 chr17 40208340 40208458 -49296095 - MIR SINE MIR -99 163 47 482 330 33 41 chr17 40208472 40208742 -49295811 - MER102b DNA MER1_type -1 340 73 185 211 0 0 chr17 40208827 40208865 -49295688 - MIR SINE MIR -224 38 1 301 308 267 0 chr17 40208894 40209089 -49295464 - L3 LINE CR1 -212 1365 1119 313 246 203 7 chr17 40210816 40210954 -49293599 + MIR SINE MIR 35 199 -63 229 266 113 24 chr17 40211252 40211376 -49293177 + MIR3 SINE MIR 53 187 -21 440 297 109 0 chr17 40214042 40214207 -49290346 - MIR3 SINE MIR -25 183 1 2928 199 47 3 chr17 40214582 40215239 -49289314 - L1 LINE L1 -847 5299 4614 288 351 50 11 chr17 40215250 40215529 -49289024 - L3 LINE CR1 -118 1459 1170 342 344 8 0 chr17 40215750 40215875 -49288678 - L3 LINE CR1 -406 1171 1046 1932 152 10 13 chr17 40215901 40216210 -49288343 - AluSx SINE Alu -4 308 1 324 294 171 11 chr17 40216218 40216405 -49288148 - MIR SINE MIR -26 236 20 460 346 81 25 chr17 40216864 40217545 -49287008 + L2 LINE L2 2554 3269 -3 256 266 43 14 chr17 40217804 40217943 -49286610 - L1ME4a LINE L1 -3 6118 5976 364 255 80 21 chr17 40217948 40218136 -49286417 - L1ME4a LINE L1 -216 5905 5707 435 301 8 8 chr17 40218820 40218943 -49285610 - MER5B DNA MER1_type -52 126 4 209 88 88 0 chr17 40219134 40219178 -49285375 + MIR SINE MIR 114 162 -100 556 106 24 0 chr17 40219835 40219920 -49284633 - AluS SINE Alu -223 89 3 2011 130 18 0 chr17 40219927 40220211 -49284342 - AluSx SINE Alu -21 291 3 180 188 0 0 chr17 40220340 40220372 -49284181 - L2 LINE L2 -19 3294 3263 322 198 198 0 chr17 40220395 40220486 -49284067 - MIR SINE MIR -63 145 37 189 326 11 22 chr17 40220478 40220567 -49283986 + L2 LINE L2 3184 3271 -1 * 281 308 33 0 chr17 40221273 40221364 -49283189 + C-rich Low_complexity Low_complexity 4 97 0 2003 126 3 10 chr17 40221867 40222160 -49282393 - AluJo SINE Alu -21 291 1 498 299 123 35 chr17 40222303 40222708 -49281845 - L2 LINE L2 -2 3270 2830 182 333 111 0 chr17 40222770 40222851 -49281702 - L2 LINE L2 -710 2604 2515 252 347 25 33 chr17 40222898 40223019 -49281534 - MIR SINE MIR -82 180 61 1710 139 4 0 chr17 40223618 40223863 -49280690 - AluSx SINE Alu -66 246 1 648 168 0 60 chr17 40223863 40224012 -49280541 - AluJo SINE Alu -171 141 2 190 143 61 41 chr17 40224012 40224061 -49280492 + MIR SINE MIR 113 162 -100 374 198 37 0 chr17 40224233 40224314 -49280239 - L2 LINE L2 -13 3259 3176 265 252 221 0 chr17 40224431 40224562 -49279991 + MIR3 SINE MIR 30 189 -19 701 226 53 21 chr17 40225155 40225345 -49279208 + MIR SINE MIR 11 206 -56 224 323 90 69 chr17 40228511 40228700 -49275853 + MIR SINE MIR 67 259 -3 723 275 171 37 chr17 40229474 40229907 -49274646 - LTR33A LTR ERVL -6 517 27 253 331 54 54 chr17 40230825 40231103 -49273450 - L2 LINE L2 -493 2821 2544 248 371 64 21 chr17 40232239 40232379 -49272174 + L2 LINE L2 3125 3270 -2 724 257 21 16 chr17 40232418 40232605 -49271948 + MIR SINE MIR 61 248 -14 516 280 90 8 chr17 40233317 40233519 -49271034 - MIR SINE MIR 0 262 50 258 136 0 0 chr17 40233610 40233654 -49270899 + (TGGA)n Simple_repeat Simple_repeat 1 44 0 213 316 0 0 chr17 40234351 40234430 -49270123 + (TG)n Simple_repeat Simple_repeat 2 80 0 1156 130 0 6 chr17 40235154 40235331 -49269222 + AluSg/x SINE Alu 131 306 -4 401 320 46 52 chr17 40235334 40235528 -49269025 - MIR SINE MIR -45 217 25 1918 128 16 16 chr17 40235632 40235937 -49268616 - AluJb SINE Alu -7 305 1 253 324 210 5 chr17 40236916 40237135 -49267418 - L2 LINE L2 -354 2960 2697 2248 85 0 13 chr17 40237148 40237455 -49267098 + AluSg SINE Alu 1 303 -7 818 178 0 14 chr17 40237465 40237611 -49266942 + FRAM SINE Alu 11 154 -22 2528 46 0 3 chr17 40237727 40238031 -49266522 + AluY SINE Alu 1 303 -8 21 0 0 0 chr17 40239628 40239649 -49264904 + GC_rich Low_complexity Low_complexity 1 21 0 311 339 182 29 chr17 40240396 40240638 -49263915 + L2 LINE L2 2992 3270 -2 240 298 75 0 chr17 40241204 40241298 -49263255 + L3 LINE CR1 1310 1410 -167 2050 95 0 18 chr17 40241379 40241694 -49262859 - AluSx SINE Alu 0 314 5 189 297 62 0 chr17 40241721 40241785 -49262768 - L2 LINE L2 -4 3268 3201 1189 175 66 90 chr17 40241866 40242243 -49262310 + MLT1A2 LTR MaLR 1 368 -6 517 258 144 0 chr17 40242350 40242517 -49262036 + MIR SINE MIR 69 259 -3 2029 129 7 7 chr17 40242739 40243041 -49261512 - AluSx SINE Alu -10 302 1 1767 139 7 13 chr17 40243384 40243687 -49260866 + AluJo SINE Alu 5 305 -7 459 257 46 33 chr17 40244391 40244543 -49260010 + MIR SINE MIR 98 251 -11 545 314 141 32 chr17 40245065 40245366 -49259187 + L2 LINE L2 1314 1581 -1732 2007 125 0 11 chr17 40245366 40245684 -49258869 - AluJb SINE Alu 0 315 1 545 314 141 32 chr17 40245684 40246031 -49258522 + L2 LINE L2 1581 3313 0 444 219 7 44 chr17 40246054 40246116 -49258437 - L1M4 LINE L1 -2472 3674 3611 2092 112 10 10 chr17 40246116 40246421 -49258132 - AluSg SINE Alu -5 305 1 444 219 7 44 chr17 40246421 40246495 -49258058 - L1M4 LINE L1 -2535 3611 3543 50 80 0 0 chr17 40246495 40246608 -49257945 + AT_rich Low_complexity Low_complexity 1 113 0 1368 239 49 13 chr17 40246608 40246847 -49257706 - L1M4 LINE L1 -2579 3567 3338 2299 94 0 0 chr17 40246847 40247154 -49257399 + AluY SINE Alu 1 307 -4 1368 239 49 13 chr17 40247154 40247365 -49257188 - L1M4 LINE L1 -2808 3338 3101 718 256 37 21 chr17 40247384 40247575 -49256978 - MIR SINE MIR -67 195 2 304 315 0 11 chr17 40249521 40249613 -49254940 + G-rich Low_complexity Low_complexity 3 93 0 299 304 117 12 chr17 40251244 40251491 -49253062 + HAL1 LINE L1 1361 1633 -874 1913 117 3 11 chr17 40251494 40251777 -49252776 - AluSx SINE Alu -13 299 19 954 197 0 0 chr17 40251967 40252145 -49252408 - FRAM SINE Alu -3 173 1 2204 125 0 0 chr17 40252268 40252573 -49251980 + AluSq SINE Alu 1 305 -8 2061 133 0 9 chr17 40252934 40253249 -49251304 + AluSx SINE Alu 1 312 0 436 296 75 6 chr17 40253286 40253445 -49251108 + MIR SINE MIR 88 257 -5 631 175 162 32 chr17 40253874 40254028 -49250525 - AluJb SINE Alu 0 312 139 505 226 93 3 chr17 40254145 40254313 -49250240 - MIR SINE MIR -23 239 52 854 210 28 6 chr17 40254332 40254513 -49250040 + MER20 DNA MER1_type 31 215 -4 274 274 0 49 chr17 40254627 40254729 -49249824 + MIR SINE MIR 33 129 -79 1630 152 57 17 chr17 40254983 40255279 -49249274 + AluJb SINE Alu 1 308 -4 592 194 65 14 chr17 40255914 40256053 -49248500 + MIR SINE MIR 6 151 -111 441 238 20 0 chr17 40257305 40257406 -49247147 - MER91A DNA MER1_type -93 103 1 962 106 0 7 chr17 40257504 40257668 -49246885 + AluSg/x SINE Alu 152 310 0 266 269 32 43 chr17 40258207 40258300 -49246253 - MIR3 SINE MIR -32 176 85 392 370 105 24 chr17 40258890 40259309 -49245244 + L1M3 LINE L1 4617 5069 -1077 2037 132 0 22 chr17 40259392 40259711 -49244842 + AluSx SINE Alu 1 312 0 2339 102 0 0 chr17 40259724 40260037 -49244516 + AluSq SINE Alu 1 313 0 372 283 47 34 chr17 40260063 40260346 -49244207 + L1M3 LINE L1 5191 5451 -729 422 178 0 0 chr17 40260370 40260443 -49244110 + AluJ/FLAM SINE Alu 5 77 -235 2032 124 11 0 chr17 40260548 40260831 -49243722 - AluSx SINE Alu -26 286 1 756 287 73 21 chr17 40260836 40261219 -49243334 + L1MC4a LINE L1 5464 5819 -302 1183 163 39 5 chr17 40261251 40261454 -49243099 - MER63A DNA MER1_type 0 210 1 753 239 64 14 chr17 40261550 40261768 -49242785 + MIR SINE MIR 2 230 -32 180 0 0 0 chr17 40261867 40261887 -49242666 + (A)n Simple_repeat Simple_repeat 1 20 0 1742 146 7 39 chr17 40261891 40262199 -49242354 + AluJo SINE Alu 7 304 -8 759 293 55 65 chr17 40262707 40263077 -49241476 + L2 LINE L2 2914 3281 -32 979 159 53 92 chr17 40263077 40263304 -49241249 + MER20 DNA MER1_type 1 218 -1 759 293 55 65 chr17 40263304 40263336 -49241217 + L2 LINE L2 3281 3312 -1 694 242 91 25 chr17 40265186 40265384 -49239169 + MER58C DNA MER1_type 5 215 0 218 260 68 68 chr17 40265390 40265536 -49239017 + L2 LINE L2 2919 3064 -208 311 250 95 60 chr17 40266081 40266249 -49238304 + MIR3 SINE MIR 27 200 -8 930 169 25 6 chr17 40266672 40266832 -49237721 - AluJo SINE Alu -18 294 132 1211 148 33 102 chr17 40266873 40267009 -49237544 + AluSx SINE Alu 21 126 -186 2521 43 0 3 chr17 40267009 40267313 -49237240 + AluY SINE Alu 1 303 -8 1211 148 33 102 chr17 40267313 40267480 -49237073 + AluSx SINE Alu 126 303 -9 749 171 0 24 chr17 40267482 40267605 -49236948 - AluJo SINE Alu -189 123 4 1910 128 0 16 chr17 40267623 40267798 -49236755 - AluSx SINE Alu -4 308 139 2430 62 0 3 chr17 40267798 40268102 -49236451 - AluY SINE Alu -8 303 1 1910 128 0 16 chr17 40268102 40268239 -49236314 - AluSx SINE Alu -173 139 1 382 364 8 0 chr17 40268239 40268371 -49236182 + L3 LINE CR1 1370 1502 -75 366 287 31 23 chr17 40269122 40269251 -49235302 + MIR SINE MIR 16 145 -117 2170 82 14 10 chr17 40269752 40270046 -49234507 + AluSc SINE Alu 1 295 -14 213 280 151 0 chr17 40270429 40270522 -49234031 - MIR SINE MIR -87 175 69 34 42 0 0 chr17 40270761 40270809 -49233744 + GC_rich Low_complexity Low_complexity 1 48 0 443 325 107 14 chr17 40271231 40271576 -49232977 + L2 LINE L2 1735 2111 -1203 574 165 116 0 chr17 40271630 40271751 -49232802 + MER20 DNA MER1_type 85 219 0 189 0 0 0 chr17 40271787 40271808 -49232745 + (TCTCC)n Simple_repeat Simple_repeat 1 21 0 1030 317 154 12 chr17 40271808 40272782 -49231771 + L2 LINE L2 2165 3272 0 234 316 61 18 chr17 40273087 40273201 -49231352 + MIR3 SINE MIR 66 184 -24 2168 118 0 9 chr17 40274255 40274570 -49229983 + AluSq SINE Alu 1 312 -1 486 294 68 6 chr17 40275007 40275170 -49229383 - MIR SINE MIR -70 192 20 2129 86 0 54 chr17 40275227 40275542 -49229011 + AluSx SINE Alu 1 298 -14 566 293 46 13 chr17 40275572 40275766 -49228787 - MIR SINE MIR -33 229 33 379 356 114 17 chr17 40275867 40276103 -49228450 + L2 LINE L2 2540 2798 -516 2335 104 0 0 chr17 40277099 40277406 -49227147 + AluSx SINE Alu 1 307 -5 441 206 0 3 chr17 40277435 40277517 -49227036 + AluJ/FLAM SINE Alu 3 68 -244 2155 94 0 10 chr17 40277517 40277814 -49226739 + AluSx SINE Alu 1 294 -18 188 284 0 75 chr17 40277974 40278041 -49226512 - L2 LINE L2 -72 3241 3180 215 274 0 0 chr17 40279470 40279521 -49225032 + L2 LINE L2 3143 3193 -79 319 324 123 20 chr17 40280202 40280446 -49224107 + L2 LINE L2 2910 3178 -94 322 276 8 0 chr17 40280486 40280748 -49223805 + GA-rich Low_complexity Low_complexity 1 264 0 189 0 0 0 chr17 40280755 40280776 -49223777 + (TGGA)n Simple_repeat Simple_repeat 3 23 0 186 209 0 0 chr17 40280872 40280915 -49223638 + (TGGA)n Simple_repeat Simple_repeat 3 45 0 231 61 0 0 chr17 40284095 40284128 -49220425 + (TG)n Simple_repeat Simple_repeat 1 33 0 343 302 72 36 chr17 40285808 40285872 -49218681 - L2 LINE L2 -6 3266 3206 2257 105 0 7 chr17 40285872 40286176 -49218377 + AluSx SINE Alu 1 302 -10 2183 82 14 7 chr17 40286176 40286469 -49218084 + AluSg SINE Alu 1 295 -15 343 302 72 36 chr17 40286469 40286542 -49218011 - L2 LINE L2 -65 3207 3123 288 349 40 26 chr17 40288338 40288490 -49216063 - MIR3 SINE MIR -14 194 41 327 358 51 11 chr17 40289506 40289682 -49214871 - MIR3 SINE MIR -18 190 8 211 298 0 0 chr17 40290599 40290612 -49213941 - L2 LINE L2 0 3313 3301 185 65 32 0 chr17 40290612 40290643 -49213910 + (CAGTT)n Simple_repeat Simple_repeat 2 33 0 211 298 0 0 chr17 40290643 40290686 -49213867 - L2 LINE L2 -11 3302 3257 421 330 12 0 chr17 40290739 40290912 -49213641 + (CA)n Simple_repeat Simple_repeat 1 175 0 232 265 12 24 chr17 40290961 40291044 -49213509 + (CA)n Simple_repeat Simple_repeat 1 82 0 610 82 206 10 chr17 40291185 40291282 -49213271 + AluSg SINE Alu 1 116 -194 1784 83 79 4 chr17 40291282 40291534 -49213019 + AluSg SINE Alu 22 292 -18 246 370 71 49 chr17 40292290 40292514 -49212039 + L3 LINE CR1 1286 1514 -63 278 265 48 0 chr17 40293202 40293285 -49211268 - L3b LINE CR1 -174 1409 1323 437 279 102 0 chr17 40294243 40294390 -49210163 - MIR SINE MIR -55 207 46 409 238 177 30 chr17 40295658 40295844 -49208709 + MIR SINE MIR 34 251 -11 198 0 0 0 chr17 40295855 40295877 -49208676 + (CAT)n Simple_repeat Simple_repeat 3 24 0 378 335 86 10 chr17 40295895 40296104 -49208449 + MIR SINE MIR 26 250 -12 699 297 113 3 chr17 40296232 40296569 -49207984 - MLT1K LTR MaLR -9 579 206 588 270 75 11 chr17 40297108 40297282 -49207271 + MIR3 SINE MIR 21 205 -3 480 292 114 52 chr17 40297573 40297801 -49206752 - MIR SINE MIR -31 231 1 766 256 134 25 chr17 40297851 40298128 -49206425 - L2 LINE L2 -1 3312 3006 602 296 59 10 chr17 40298146 40298358 -49206195 + MIR SINE MIR 37 261 -1 241 245 43 53 chr17 40298457 40298551 -49206002 + MIR3 SINE MIR 11 103 -105 358 287 60 8 chr17 40298654 40298785 -49205768 + MIR SINE MIR 57 192 -35 478 254 99 22 chr17 40299355 40299536 -49205017 + MIR3 SINE MIR 7 201 -7 1408 278 102 24 chr17 40300498 40301248 -49203305 + L2 LINE L2 2436 3251 -62 507 303 74 6 chr17 40301410 40301572 -49202981 + MIR3 SINE MIR 31 203 -5 349 266 61 3 chr17 40301625 40301748 -49202805 + MIR SINE MIR 21 153 -63 2069 121 0 29 chr17 40304251 40304565 -49199988 - AluSx SINE Alu -7 305 1 220 208 0 0 chr17 40304960 40305013 -49199540 + A-rich Low_complexity Low_complexity 2 54 0 411 83 0 0 chr17 40305719 40305779 -49198774 + (CA)n Simple_repeat Simple_repeat 2 61 0 216 0 0 0 chr17 40307859 40307883 -49196670 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1736 132 40 4 chr17 40307885 40308158 -49196395 - AluSx SINE Alu -29 283 1 2233 73 7 10 chr17 40308642 40308943 -49195610 - AluSp SINE Alu -13 300 1 959 114 0 0 chr17 40308967 40309098 -49195455 - AluSg SINE Alu -179 131 1 470 209 47 0 chr17 40309100 40309186 -49195367 - AluJ/FLAM SINE Alu -222 90 1 243 333 61 10 chr17 40309329 40309428 -49195125 - L2 LINE L2 0 3272 3169 376 218 127 9 chr17 40309753 40309863 -49194690 + L2 LINE L2 3191 3313 0 204 232 256 24 chr17 40309958 40310083 -49194470 - L2 LINE L2 -843 2471 2318 292 349 24 34 chr17 40310206 40310415 -49194138 - L2 LINE L2 -1067 2247 2041 410 63 0 16 chr17 40310739 40310802 -49193751 + (TG)n Simple_repeat Simple_repeat 2 63 0 2144 106 0 3 chr17 40310856 40311149 -49193404 + AluSx SINE Alu 1 292 -20 1602 171 0 4 chr17 40311177 40311434 -49193119 + AluJb SINE Alu 34 289 -23 1021 101 0 7 chr17 40311469 40311607 -49192946 + AluSq/x SINE Alu 1 137 -176 1997 116 3 29 chr17 40312081 40312391 -49192162 - AluY SINE Alu -7 304 3 1814 151 3 11 chr17 40312410 40312695 -49191858 - AluSx SINE Alu -29 283 1 2221 67 0 29 chr17 40313631 40313946 -49190607 + AluSx SINE Alu 1 306 -6 1555 181 3 29 chr17 40314075 40314385 -49190168 + AluJo SINE Alu 1 302 -10 2120 110 0 25 chr17 40314386 40314704 -49189849 + AluY SINE Alu 1 310 -1 1994 126 0 31 chr17 40314724 40315042 -49189511 + AluSq SINE Alu 1 308 -5 1212 92 0 78 chr17 40315126 40315149 -49189404 + AluSp SINE Alu 120 143 -170 1936 170 0 7 chr17 40315149 40315455 -49189098 + AluSp SINE Alu 1 304 -9 1212 92 0 78 chr17 40315455 40315637 -49188916 + AluSp SINE Alu 143 309 -4 466 232 125 0 chr17 40315653 40315765 -49188788 + FLAM_A SINE Alu 10 135 -7 2053 89 0 49 chr17 40315812 40316139 -49188414 + AluSx SINE Alu 1 311 -1 242 362 32 11 chr17 40316999 40317093 -49187460 + L2 LINE L2 3148 3243 -29 2173 59 0 56 chr17 40318312 40318636 -49185917 - AluY SINE Alu -5 306 1 303 369 31 38 chr17 40320505 40320665 -49183888 - L3b LINE CR1 -11 1572 1414 2237 93 0 26 chr17 40320933 40321243 -49183310 + AluSx SINE Alu 1 302 -10 273 146 55 82 chr17 40321320 40321355 -49183198 + HAL1 LINE L1 1231 1265 -1242 1568 153 17 49 chr17 40321355 40321642 -49182911 + AluJo SINE Alu 2 279 -33 273 146 55 82 chr17 40321642 40321716 -49182837 + HAL1 LINE L1 1265 1337 -1170 289 254 11 103 chr17 40321719 40321904 -49182649 + HAL1 LINE L1 2035 2202 -305 885 129 0 14 chr17 40321993 40322132 -49182421 + AluSq/x SINE Alu 1 137 -175 2091 89 9 41 chr17 40322132 40322447 -49182106 + AluSx SINE Alu 1 305 -7 2032 105 0 42 chr17 40322824 40323137 -49181416 - AluSp SINE Alu -13 300 1 591 94 35 0 chr17 40323395 40323480 -49181073 - AluS SINE Alu -221 91 4 317 148 0 7 chr17 40323483 40323551 -49181002 + Alu SINE Alu 245 296 -6 2178 119 0 3 chr17 40323983 40324295 -49180258 + AluSq SINE Alu 1 311 -2 422 331 28 0 chr17 40324329 40324474 -49180079 + MIR SINE MIR 2 150 -112 28 71 0 0 chr17 40325138 40325194 -49179359 + GC_rich Low_complexity Low_complexity 1 56 0 1923 129 0 37 chr17 40325475 40325792 -49178761 - AluSq SINE Alu 0 306 1 1197 195 70 79 chr17 40325890 40325928 -49178625 - Charlie1b DNA MER1_type -2240 521 484 2284 101 0 7 chr17 40325928 40326236 -49178317 - AluSx SINE Alu -6 306 1 2111 108 3 0 chr17 40326237 40326532 -49178021 - AluSp SINE Alu -17 296 1 1197 195 70 79 chr17 40326532 40326712 -49177841 - Charlie1b DNA MER1_type -2277 484 304 1530 150 87 0 chr17 40326712 40326966 -49177587 + AluJb SINE Alu 11 306 0 181 0 0 0 chr17 40326966 40326986 -49177567 + (TAAAA)n Simple_repeat Simple_repeat 5 105 0 1197 195 70 79 chr17 40326986 40327244 -49177309 - Charlie1b DNA MER1_type -2457 304 44 2182 56 7 36 chr17 40327265 40327569 -49176984 + AluY SINE Alu 1 295 -16 1526 104 0 9 chr17 40327585 40327806 -49176747 + AluSp SINE Alu 1 219 -94 799 212 22 11 chr17 40328116 40328295 -49176258 + AluSg/x SINE Alu 132 312 0 806 128 0 0 chr17 40328414 40328523 -49176030 + AluJb SINE Alu 7 115 -197 888 181 0 0 chr17 40328523 40328678 -49175875 + AluSg/x SINE Alu 158 312 0 2214 64 3 41 chr17 40328688 40329002 -49175551 + AluY SINE Alu 1 302 -9 1260 135 8 81 chr17 40329717 40329976 -49174577 + AluJb SINE Alu 40 279 -33 1138 83 12 153 chr17 40329995 40330249 -49174304 + AluY SINE Alu 93 310 -1 1362 163 90 10 chr17 40331021 40331310 -49173243 + AluJo SINE Alu 1 312 0 2206 77 0 23 chr17 40331320 40331620 -49172933 + AluY SINE Alu 1 293 -18 252 0 0 0 chr17 40331664 40331692 -49172861 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 1306 190 21 4 chr17 40331692 40331934 -49172619 - AluJb SINE Alu -32 280 35 329 137 41 41 chr17 40331947 40332020 -49172533 + L1MB1 LINE L1 5779 5851 -317 2272 88 0 0 chr17 40332458 40332753 -49171800 - AluSx SINE Alu -17 295 1 2320 82 3 0 chr17 40332764 40333068 -49171485 - AluSx SINE Alu -7 305 1 1904 148 0 3 chr17 40333122 40333426 -49171127 + AluJb SINE Alu 10 312 0 2228 170 50 7 chr17 40333481 40334019 -49170534 + L1MB1 LINE L1 4940 6167 -1 471 144 0 22 chr17 40334068 40334158 -49170395 + FLAM_C SINE Alu 54 141 -2 1366 130 27 96 chr17 40334159 40334341 -49170212 + L1M4 LINE L1 5021 5165 -981 2336 97 0 0 chr17 40334341 40334652 -49169901 + AluSx SINE Alu 1 311 -1 1366 130 27 96 chr17 40334652 40334845 -49169708 + L1M4 LINE L1 5165 5370 -776 828 142 0 0 chr17 40334857 40334984 -49169569 + FLAM_C SINE Alu 12 138 -5 2072 137 0 0 chr17 40334990 40335296 -49169257 + AluSx SINE Alu 1 306 -6 1316 142 19 52 chr17 40335297 40335378 -49169175 + L1M4 LINE L1 5360 5442 -742 2155 112 3 0 chr17 40335378 40335681 -49168872 + AluSx SINE Alu 1 304 -8 1316 142 19 52 chr17 40335681 40335866 -49168687 + L1M4 LINE L1 5442 5617 -567 241 302 0 0 chr17 40337061 40337124 -49167429 + MIR SINE MIR 85 147 -61 198 258 75 50 chr17 40338028 40338148 -49166405 - L3 LINE CR1 -267 1310 1188 25 0 0 0 chr17 40338938 40338963 -49165590 + GC_rich Low_complexity Low_complexity 1 25 0 279 213 28 46 chr17 40339056 40339164 -49165389 + (CCCCG)n Simple_repeat Simple_repeat 4 109 0 2429 58 0 10 chr17 40340492 40340801 -49163752 - AluY SINE Alu -5 306 1 273 338 45 32 chr17 40342639 40342796 -49161757 - L3b LINE CR1 -11 1572 1414 2303 84 0 0 chr17 40343064 40343361 -49161192 + AluSx SINE Alu 1 297 -15 328 147 55 73 chr17 40343438 40343473 -49161080 + HAL1 LINE L1 1231 1265 -1242 1553 154 18 42 chr17 40343473 40343758 -49160795 + AluJo SINE Alu 2 279 -33 328 147 55 73 chr17 40343758 40343831 -49160722 + HAL1 LINE L1 1265 1337 -1170 518 293 33 87 chr17 40343834 40344104 -49160449 + HAL1 LINE L1 2035 2318 -189 1886 157 0 25 chr17 40344104 40344241 -49160312 + AluSx SINE Alu 1 140 -172 2170 87 27 3 chr17 40344241 40344540 -49160013 + AluSx SINE Alu 1 306 -6 2324 90 0 0 chr17 40344542 40344841 -49159712 + AluSp SINE Alu 3 301 -12 1886 157 0 25 chr17 40344841 40345019 -49159534 + AluSx SINE Alu 141 311 -1 518 293 33 87 chr17 40345019 40345172 -49159381 + HAL1 LINE L1 2318 2435 -72 800 161 0 0 chr17 40345203 40345327 -49159226 - FLAM_C SINE Alu -17 126 3 789 248 0 12 chr17 40345363 40345524 -49159029 - AluJo SINE Alu -27 285 127 1938 146 3 0 chr17 40345532 40345827 -49158726 - AluSx SINE Alu -16 296 1 2122 97 3 3 chr17 40346755 40347054 -49157499 + AluSq SINE Alu 1 299 -14 1298 103 0 0 chr17 40347054 40347228 -49157325 + AluSp SINE Alu 134 307 -6 471 232 125 0 chr17 40347244 40347356 -49157197 + FLAM_A SINE Alu 10 135 -7 2403 66 3 0 chr17 40347401 40347704 -49156849 + AluSx SINE Alu 1 304 -8 346 325 68 0 chr17 40348555 40348672 -49155881 + L2 LINE L2 3148 3272 0 252 149 0 0 chr17 40348785 40348832 -49155721 + (TTC)n Simple_repeat Simple_repeat 2 48 0 1971 127 7 10 chr17 40348898 40349198 -49155355 + AluSx SINE Alu 7 305 -7 2090 112 0 16 chr17 40349203 40349506 -49155047 + AluSg SINE Alu 1 298 -12 2186 90 0 26 chr17 40349508 40349818 -49154735 + AluY SINE Alu 3 304 -7 2229 88 7 0 chr17 40350193 40350490 -49154063 - AluSp SINE Alu -14 299 1 249 200 0 0 chr17 40350934 40350984 -49153569 + CT-rich Low_complexity Low_complexity 2 51 0 1983 136 0 16 chr17 40351064 40351372 -49153181 + AluSx SINE Alu 7 309 -3 1856 134 0 23 chr17 40351377 40351682 -49152871 + AluSg SINE Alu 1 298 -12 2105 66 0 75 chr17 40351684 40352019 -49152534 + AluY SINE Alu 2 311 0 1451 160 25 7 chr17 40352055 40352106 -49152447 + L1MB3 LINE L1 5859 5908 -275 1964 100 60 20 chr17 40352106 40352406 -49152147 - AluSp SINE Alu -1 312 1 1451 160 25 7 chr17 40352406 40352629 -49151924 + L1MB3 LINE L1 5908 6138 -45 1023 108 12 30 chr17 40352629 40352795 -49151758 + AluSc SINE Alu 147 309 0 823 223 6 6 chr17 40353067 40353233 -49151320 - AluJb SINE Alu -13 299 134 1614 157 3 31 chr17 40353234 40353521 -49151032 - AluJo SINE Alu -12 300 22 269 318 38 30 chr17 40354685 40354817 -49149736 - L2 LINE L2 -1 3312 3180 252 313 69 30 chr17 40357136 40357267 -49147286 + MIR3 SINE MIR 42 177 -31 1800 157 0 10 chr17 40357747 40358046 -49146507 - AluJb SINE Alu -16 296 1 994 176 12 0 chr17 40358046 40358211 -49146342 - AluJo SINE Alu -13 299 133 2236 73 6 32 chr17 40359150 40359466 -49145087 + AluSq SINE Alu 1 308 -5 1997 108 3 19 chr17 40359846 40360153 -49144400 - AluSq SINE Alu -7 306 5 926 137 0 0 chr17 40360665 40360796 -49143757 - AluJo SINE Alu -171 131 1 259 282 261 7 chr17 40360820 40360962 -49143591 + MER5A DNA MER1_type 7 184 -5 275 272 12 0 chr17 40360971 40361052 -49143501 + L1ME3A LINE L1 6080 6161 -9 2172 82 6 25 chr17 40361656 40361973 -49142580 + AluSq SINE Alu 1 311 -2 1417 197 75 4 chr17 40363346 40363625 -49140928 - AluJo SINE Alu -13 299 1 227 241 19 0 chr17 40363710 40363764 -49140789 + L2 LINE L2 3010 3064 -208 2018 116 0 28 chr17 40363896 40364216 -49140337 - AluSq SINE Alu -2 311 1 206 279 0 44 chr17 40364262 40364330 -49140223 + L2 LINE L2 3206 3270 -2 2113 79 7 4 chr17 40364496 40364809 -49139744 - AluY SINE Alu 0 314 1 269 247 14 14 chr17 40365046 40365119 -49139434 - L1M4 LINE L1 -1339 4807 4735 1908 145 0 7 chr17 40366392 40366696 -49137857 + AluJb SINE Alu 1 302 -10 184 211 184 0 chr17 40366803 40366879 -49137674 - L3 LINE CR1 -174 1403 1314 594 314 12 58 chr17 40367203 40367352 -49137201 + MIR SINE MIR 12 147 -115 2091 118 3 0 chr17 40367352 40367648 -49136905 + AluSx SINE Alu 2 298 -14 594 314 12 58 chr17 40367648 40367740 -49136813 + MIR SINE MIR 147 242 -20 473 312 111 43 chr17 40367829 40368153 -49136400 + L2 LINE L2 2926 3271 -1 826 331 21 7 chr17 40368166 40368450 -49136103 - L3 LINE CR1 -682 895 608 362 365 0 0 chr17 40368469 40368606 -49135947 - MIR SINE MIR -3 259 123 1408 239 65 11 chr17 40368609 40368981 -49135572 + MLT1J1 LTR MaLR 52 443 -3 205 306 61 20 chr17 40369016 40369114 -49135439 - MIR SINE MIR -128 134 33 1025 201 11 0 chr17 40369578 40369752 -49134801 - MER45A DNA AcHobo -2 176 1 314 242 81 0 chr17 40370774 40370873 -49133680 - MIR SINE MIR -70 138 32 216 246 49 0 chr17 40373392 40373453 -49131100 - MIR SINE MIR -96 166 103 411 267 78 0 chr17 40373574 40373690 -49130863 - MIR3 SINE MIR -21 187 63 237 298 107 0 chr17 40374545 40374629 -49129924 - MIR3 SINE MIR -25 183 91 23 0 0 0 chr17 40375207 40375230 -49129323 + GC_rich Low_complexity Low_complexity 1 23 0 331 271 25 37 chr17 40377184 40377395 -49127158 + GA-rich Low_complexity Low_complexity 1 208 0 204 40 0 0 chr17 40378170 40378195 -49126358 + (TGGGGG)n Simple_repeat Simple_repeat 4 28 0 188 65 0 32 chr17 40378773 40378804 -49125749 + (CATATA)n Simple_repeat Simple_repeat 2 31 0 220 230 27 27 chr17 40379911 40379985 -49124568 + L3 LINE CR1 1387 1460 -117 471 239 82 14 chr17 40380005 40380173 -49124380 + MER5B DNA MER1_type 5 175 -3 225 0 0 0 chr17 40380264 40380289 -49124264 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 699 46 0 0 chr17 40380292 40380379 -49124174 + (TTCC)n Simple_repeat Simple_repeat 2 88 0 1142 201 201 0 chr17 40380387 40380646 -49123907 - AluJb SINE Alu -1 311 1 622 279 39 17 chr17 40380656 40380835 -49123718 - MIR SINE MIR -78 184 2 239 320 170 0 chr17 40382007 40382207 -49122346 - L2 LINE L2 -212 3060 2827 309 227 13 40 chr17 40384714 40384789 -49119764 + L2 LINE L2 3200 3272 0 180 97 0 0 chr17 40386212 40386243 -49118310 + (CCG)n Simple_repeat Simple_repeat 1 31 0 28 29 0 0 chr17 40386266 40386301 -49118252 + GC_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr17 40386365 40386408 -49118145 + GC_rich Low_complexity Low_complexity 1 43 0 1742 126 41 38 chr17 40388697 40388990 -49115563 - AluJb SINE Alu -18 294 1 228 333 184 9 chr17 40389318 40389432 -49115121 - L2 LINE L2 -2 3270 3137 243 342 104 42 chr17 40390412 40390652 -49113901 + L2 LINE L2 2836 3090 -182 29 28 0 0 chr17 40392127 40392163 -49112390 + GC_rich Low_complexity Low_complexity 1 36 0 264 59 0 0 chr17 40393719 40393753 -49110800 + (CA)n Simple_repeat Simple_repeat 2 35 0 358 302 69 0 chr17 40393916 40394032 -49110521 - MIR SINE MIR -90 172 49 1720 188 3 10 chr17 40394262 40394565 -49109988 - AluJo SINE Alu 0 312 12 2203 116 0 3 chr17 40394566 40394877 -49109676 + AluSg SINE Alu 1 310 0 243 239 68 8 chr17 40395005 40395122 -49109431 - MER113 DNA MER1_type? -361 160 37 1853 125 10 27 chr17 40396515 40396810 -49107743 - AluJo SINE Alu -16 296 7 192 191 26 0 chr17 40396848 40396903 -49107650 + MIR SINE MIR 97 152 -57 2423 77 3 0 chr17 40396983 40397294 -49107259 - AluSq SINE Alu -1 312 1 198 167 0 0 chr17 40398283 40398319 -49106234 + GA-rich Low_complexity Low_complexity 1 36 0 186 71 0 0 chr17 40398699 40398727 -49105826 + (CA)n Simple_repeat Simple_repeat 1 28 0 263 302 0 0 chr17 40399902 40399965 -49104588 - MIR SINE MIR -60 148 86 247 308 15 0 chr17 40401428 40401493 -49103060 + MIR SINE MIR 71 136 -72 186 167 0 0 chr17 40401501 40401537 -49103016 + GA-rich Low_complexity Low_complexity 2 37 0 581 67 0 0 chr17 40402582 40402657 -49101896 - AluS SINE Alu -238 75 1 2109 114 7 0 chr17 40403687 40403977 -49100576 - AluSx SINE Alu -20 292 1 479 332 78 16 chr17 40403977 40404221 -49100332 - MIR SINE MIR -1 261 3 234 360 79 0 chr17 40404816 40404955 -49099598 - L3 LINE CR1 -383 1194 1045 626 297 68 0 chr17 40405924 40406129 -49098424 + MIR SINE MIR 14 231 -31 183 193 0 158 chr17 40406103 40406160 -49098393 + L2 LINE L2 3251 3298 -15 * 506 356 28 0 chr17 40406947 40407127 -49097426 + MIR SINE MIR 76 260 -2 294 211 0 0 chr17 40407435 40407492 -49097061 + L3 LINE CR1 1418 1474 -103 631 296 63 14 chr17 40408024 40408247 -49096306 - MIR SINE MIR -7 255 22 316 281 37 0 chr17 40408577 40408659 -49095894 + L2 LINE L2 3214 3298 -15 2237 82 0 0 chr17 40408677 40408957 -49095596 - AluSg SINE Alu -30 280 1 231 250 0 0 chr17 40408973 40409021 -49095532 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 237 333 0 0 chr17 40409238 40409310 -49095243 + (CA)n Simple_repeat Simple_repeat 1 72 0 758 298 55 8 chr17 40410914 40411152 -49093401 - MIR SINE MIR -13 249 1 255 125 0 0 chr17 40412430 40412470 -49092083 + (TG)n Simple_repeat Simple_repeat 2 41 0 431 244 64 11 chr17 40412601 40412752 -49091801 - MIR3 SINE MIR -27 181 13 321 297 0 85 chr17 40413033 40413151 -49091402 - L3b LINE CR1 -200 1383 1276 253 275 12 12 chr17 40413430 40413510 -49091043 - MIR SINE MIR -8 254 175 525 256 71 12 chr17 40414533 40414701 -49089852 - MIR3 SINE MIR -14 194 17 390 115 0 0 chr17 40415063 40415124 -49089429 + (CA)n Simple_repeat Simple_repeat 2 62 0 294 255 11 75 chr17 40415281 40415469 -49089084 + GA-rich Low_complexity Low_complexity 1 176 0 216 111 0 0 chr17 40415628 40415664 -49088889 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 348 143 36 0 chr17 40416605 40416689 -49087864 + GA-rich Low_complexity Low_complexity 1 87 0 291 262 8 56 chr17 40418673 40418799 -49085754 + C-rich Low_complexity Low_complexity 4 123 0 241 230 23 23 chr17 40418954 40419041 -49085512 + C-rich Low_complexity Low_complexity 4 90 0 57 85 0 0 chr17 40419147 40419288 -49085265 + GC_rich Low_complexity Low_complexity 1 141 0 357 302 7 13 chr17 40419315 40419464 -49085089 + (CG)n Simple_repeat Simple_repeat 1 148 0 28 0 0 0 chr17 40419479 40419507 -49085046 + GC_rich Low_complexity Low_complexity 1 28 0 31 0 0 0 chr17 40419563 40419594 -49084959 + GC_rich Low_complexity Low_complexity 1 31 0 432 306 16 0 chr17 40423403 40423527 -49081026 - MER5A DNA MER1_type 0 189 64 2375 93 0 0 chr17 40423527 40423839 -49080714 - AluSx SINE Alu 0 312 1 299 118 0 0 chr17 40423851 40423902 -49080651 - AluSp/q SINE Alu -4 299 249 2234 105 3 3 chr17 40424158 40424462 -49080091 + AluSq SINE Alu 1 304 -9 2196 99 7 0 chr17 40424494 40424797 -49079756 + AluSx SINE Alu 2 306 -6 221 206 0 32 chr17 40424958 40425021 -49079532 + GA-rich Low_complexity Low_complexity 4 64 0 884 129 35 2 chr17 40425438 40425687 -49078866 + L1MB5 LINE L1 5511 5873 -311 750 192 0 0 chr17 40425687 40425812 -49078741 + FLAM_C SINE Alu 1 125 -18 1352 161 84 21 chr17 40425828 40426114 -49078439 + L1MB5 LINE L1 5861 6164 -10 1867 83 0 0 chr17 40426549 40426779 -49077774 - AluSx SINE Alu -62 250 21 486 175 361 3 chr17 40427143 40427362 -49077191 + MER5C DNA MER1_type 1 323 -1 246 32 0 0 chr17 40427475 40427506 -49077047 + (CA)n Simple_repeat Simple_repeat 2 32 0 210 333 14 48 chr17 40427507 40427654 -49076899 + L2 LINE L2 2916 3057 -215 2359 105 0 22 chr17 40428103 40428418 -49076135 + AluSc SINE Alu 1 308 -1 1873 138 16 53 chr17 40428435 40428554 -49075999 + AluJb SINE Alu 1 123 -189 2412 86 0 0 chr17 40428554 40428844 -49075709 - AluSg SINE Alu -20 290 1 1873 138 16 53 chr17 40428844 40429044 -49075509 + AluJb SINE Alu 123 308 -4 2126 132 13 0 chr17 40429063 40429367 -49075186 - AluSx SINE Alu -4 308 1 1236 156 0 0 chr17 40429468 40429673 -49074880 + AluJb SINE Alu 132 336 0 400 267 114 0 chr17 40430162 40430267 -49074286 - MIR SINE MIR -118 144 28 199 301 98 68 chr17 40430884 40431150 -49073403 - L2 LINE L2 -179 3093 2820 1839 148 46 11 chr17 40431438 40431722 -49072831 + AluJb SINE Alu 1 294 -18 210 37 0 0 chr17 40431722 40431749 -49072804 + (GA)n Simple_repeat Simple_repeat 2 28 0 496 303 82 0 chr17 40431850 40432045 -49072508 - MIR SINE MIR -24 238 28 2460 82 0 0 chr17 40432064 40432369 -49072184 - AluY SINE Alu -6 305 1 340 286 53 45 chr17 40432514 40432530 -49072023 - MIR3 SINE MIR -72 136 122 1883 132 37 0 chr17 40432530 40432829 -49071724 + AluSx SINE Alu 1 309 0 340 286 53 45 chr17 40432829 40432943 -49071610 - MIR3 SINE MIR -86 122 3 348 238 238 16 chr17 40432992 40433118 -49071435 + MIR SINE MIR 103 256 -6 250 308 87 10 chr17 40433099 40433203 -49071350 - L2 LINE L2 -7 3306 3195 * 354 175 0 0 chr17 40433861 40433918 -49070635 - MIR SINE MIR -62 146 90 2335 106 0 3 chr17 40434621 40434923 -49069630 - AluSx SINE Alu -11 301 1 1793 244 106 35 chr17 40435246 40435780 -49068773 + L1ME1 LINE L1 4074 4682 -1464 2263 119 3 3 chr17 40435780 40436091 -49068462 + AluSx SINE Alu 1 311 -1 1793 244 106 35 chr17 40436091 40436333 -49068220 + L1ME1 LINE L1 4682 4905 -1241 1991 158 7 0 chr17 40436333 40436630 -49067923 + AluJb SINE Alu 2 300 -12 1145 179 0 0 chr17 40436634 40436813 -49067740 + FRAM SINE Alu 1 173 -3 2382 98 3 0 chr17 40436813 40437119 -49067434 + AluSx SINE Alu 1 307 -5 873 163 93 57 chr17 40437120 40437249 -49067304 + L1ME1 LINE L1 5203 5326 -916 1957 124 29 0 chr17 40437249 40437566 -49066987 + AluSx SINE Alu 1 325 0 873 163 93 57 chr17 40437566 40437577 -49066976 + L1ME1 LINE L1 5326 5335 -907 1721 149 44 37 chr17 40437577 40437707 -49066846 + AluJb SINE Alu 1 129 -183 2475 75 0 25 chr17 40437707 40438025 -49066528 + AluSx SINE Alu 1 310 -2 1721 149 44 37 chr17 40438025 40438190 -49066363 + AluJb SINE Alu 129 298 -14 873 163 93 57 chr17 40438190 40438414 -49066139 + L1ME1 LINE L1 5335 5586 -656 1138 148 17 0 chr17 40438431 40438607 -49065946 - AluSg/x SINE Alu 0 312 134 2402 93 0 0 chr17 40438607 40438907 -49065646 - AluSx SINE Alu -12 300 1 782 241 79 28 chr17 40438916 40439206 -49065347 + L1ME1 LINE L1 5857 6161 -5 403 289 127 25 chr17 40439258 40439745 -49064808 + L1MC/D LINE L1 4151 4687 -1459 24 0 0 0 chr17 40439992 40440016 -49064537 + AT_rich Low_complexity Low_complexity 1 24 0 2269 98 0 13 chr17 40440016 40440322 -49064231 - AluSx SINE Alu 0 312 11 358 312 101 7 chr17 40440600 40440738 -49063815 + L1MC/D LINE L1 4906 5056 -1090 198 136 0 0 chr17 40440745 40440789 -49063764 + (T)n Simple_repeat Simple_repeat 1 44 0 2307 101 0 0 chr17 40440940 40441238 -49063315 + AluSq SINE Alu 1 298 -15 383 356 35 16 chr17 40441297 40441396 -49063157 + L1MC/D LINE L1 5255 5351 -2457 1684 169 63 25 chr17 40441396 40441680 -49062873 - AluJo SINE Alu -15 297 3 383 356 35 16 chr17 40441680 40441881 -49062672 + L1MC/D LINE L1 5351 5641 -2167 679 238 15 81 chr17 40441885 40442158 -49062395 + MLT1K LTR MaLR 10 264 -324 464 270 80 6 chr17 40442187 40442350 -49062203 + MLT1K LTR MaLR 342 516 -72 1113 88 0 7 chr17 40442361 40442497 -49062056 + AluSq/x SINE Alu 1 135 -177 1962 147 3 0 chr17 40442497 40442805 -49061748 + AluJb SINE Alu 1 309 0 2399 103 0 0 chr17 40442866 40443176 -49061377 - AluSg SINE Alu 0 310 1 754 138 48 0 chr17 40443199 40443314 -49061239 - MER44D DNA MER2_type -1915 572 447 2395 108 0 0 chr17 40443314 40443621 -49060932 + AluSx SINE Alu 1 307 -5 754 138 48 0 chr17 40443621 40443650 -49060903 - MER44D DNA MER2_type -2040 447 421 5722 68 80 5 chr17 40443652 40444456 -49060097 + SVA Other Other 3 866 -520 1215 48 0 34 chr17 40444471 40444680 -49059873 + SVA Other Other 665 866 -520 1058 89 122 24 chr17 40444708 40444955 -49059598 + SVA Other Other 596 866 -520 6561 31 12 3 chr17 40444983 40445747 -49058806 + SVA Other Other 635 1386 0 465 230 0 10 chr17 40445762 40445862 -49058691 - MER44D DNA MER2_type -240 369 1 336 125 0 0 chr17 40445897 40445961 -49058592 + (CA)n Simple_repeat Simple_repeat 2 65 0 1968 116 29 0 chr17 40446016 40446329 -49058224 - AluSx SINE Alu 0 321 1 890 152 0 0 chr17 40446378 40446510 -49058043 - FLAM_C SINE Alu 0 133 2 430 262 29 0 chr17 40446535 40446638 -49057915 - L2 LINE L2 -2 3311 3206 2089 127 3 7 chr17 40446681 40446981 -49057572 + AluSx SINE Alu 5 303 -9 465 378 9 22 chr17 40446994 40447216 -49057337 + L2 LINE L2 1126 1344 -1970 2244 102 0 0 chr17 40447238 40447522 -49057031 + AluSg SINE Alu 1 284 -26 420 222 52 89 chr17 40447557 40447612 -49056941 + MLT1I LTR MaLR 40 95 -314 2329 59 38 10 chr17 40447612 40447902 -49056651 + AluY SINE Alu 1 298 -13 420 222 52 89 chr17 40447902 40447981 -49056572 + MLT1I LTR MaLR 95 169 -240 1078 191 0 0 chr17 40447992 40448186 -49056367 - L1PB3 LINE L1 -10 6144 5951 1192 103 0 0 chr17 40448186 40448341 -49056212 - AluSg/x SINE Alu -27 285 131 1092 301 128 65 chr17 40448341 40448515 -49056038 + L2 LINE L2 1804 1966 -1348 2460 86 3 3 chr17 40448515 40448828 -49055725 + AluSp SINE Alu 1 313 0 1092 301 128 65 chr17 40448828 40448866 -49055687 + L2 LINE L2 1966 2000 -1314 2434 94 0 0 chr17 40448866 40449174 -49055379 - AluSg SINE Alu -2 308 1 1092 301 128 65 chr17 40449174 40449582 -49054971 + L2 LINE L2 2000 2381 -933 1841 99 43 139 chr17 40449582 40449955 -49054598 + MER1B DNA MER1_type 1 337 0 1092 301 128 65 chr17 40449955 40449975 -49054578 + L2 LINE L2 2381 2398 -916 2281 94 3 7 chr17 40449975 40450273 -49054280 - AluSx SINE Alu -15 297 1 1092 301 128 65 chr17 40450273 40450481 -49054072 + L2 LINE L2 2398 2709 -605 658 226 41 0 chr17 40450481 40450676 -49053877 + L1ME2 LINE L1 2193 2395 -4001 842 144 0 27 chr17 40450676 40450822 -49053731 + FLAM_C SINE Alu 1 142 -1 2422 221 64 69 chr17 40450832 40450945 -49053608 + L1ME2 LINE L1 2347 2459 -3756 2189 123 0 22 chr17 40450945 40451262 -49053291 + AluSx SINE Alu 3 312 0 2422 221 64 69 chr17 40451262 40451382 -49053171 + L1ME2 LINE L1 2459 2578 -3637 1830 171 3 16 chr17 40451382 40451697 -49052856 + AluJo SINE Alu 1 311 -1 2422 221 64 69 chr17 40451697 40452467 -49052086 + L1ME2 LINE L1 2578 3346 -2869 2358 95 6 16 chr17 40452513 40452828 -49051725 + AluSx SINE Alu 1 312 0 986 265 32 67 chr17 40452845 40453104 -49051449 + L1ME2 LINE L1 3309 3576 -2639 2309 106 3 0 chr17 40453104 40453406 -49051147 + AluSg SINE Alu 1 303 -7 986 265 32 67 chr17 40453406 40453430 -49051123 + L1ME2 LINE L1 3576 3599 -2616 2195 103 7 0 chr17 40453430 40453761 -49050792 + AluSx SINE Alu 1 333 0 986 265 32 67 chr17 40453761 40454011 -49050542 + L1ME2 LINE L1 3599 3825 -2390 2272 123 3 0 chr17 40454013 40454322 -49050231 + AluSx SINE Alu 1 310 -2 2342 91 3 3 chr17 40454328 40454624 -49049929 + AluSp SINE Alu 1 296 -17 1411 191 4 12 chr17 40454693 40454949 -49049604 - AluJo SINE Alu -13 299 46 909 150 0 0 chr17 40454952 40455085 -49049468 - AluJo/FLAM SINE Alu -169 133 1 3787 209 104 48 chr17 40455097 40456053 -49048500 + L1ME2 LINE L1 3842 4743 -1490 2549 71 3 0 chr17 40456053 40456361 -49048192 + AluY SINE Alu 1 309 -2 3787 209 104 48 chr17 40456361 40456869 -49047684 + L1ME2 LINE L1 4743 5221 -1012 1951 147 3 10 chr17 40456869 40457161 -49047392 + AluJb SINE Alu 1 290 -22 3787 209 104 48 chr17 40457161 40457215 -49047338 + L1ME2 LINE L1 5221 5271 -962 2235 68 47 0 chr17 40457215 40457493 -49047060 + AluSx SINE Alu 1 291 -21 3787 209 104 48 chr17 40457493 40457792 -49046761 + L1ME2 LINE L1 5271 5552 -681 2115 125 3 0 chr17 40457792 40458095 -49046458 - AluSx SINE Alu -6 306 3 3787 209 104 48 chr17 40458095 40458537 -49046016 + L1ME2 LINE L1 5552 6233 0 886 241 72 13 chr17 40458557 40458818 -49045735 + L1ME3 LINE L1 3962 4242 -1904 2373 80 3 7 chr17 40458818 40459120 -49045433 + AluY SINE Alu 1 301 -10 886 241 72 13 chr17 40459120 40459160 -49045393 + L1ME3 LINE L1 4242 4278 -1868 2199 106 7 10 chr17 40459167 40459469 -49045084 + AluSx SINE Alu 1 301 -11 1106 258 67 19 chr17 40459473 40459891 -49044662 + L1ME3 LINE L1 4776 5213 -933 534 245 121 7 chr17 40460002 40460415 -49044138 + L1ME3 LINE L1 5320 5815 -351 810 169 0 0 chr17 40460419 40460555 -49043998 + FLAM_C SINE Alu 3 138 -5 1341 163 88 46 chr17 40460557 40460840 -49043713 + AluJb SINE Alu 1 295 -17 622 152 0 34 chr17 40460840 40460976 -49043577 + L1ME3 LINE L1 5834 5964 -223 274 125 0 0 chr17 40461005 40461045 -49043508 + Alu SINE Alu 1 40 -263 1438 144 0 0 chr17 40461045 40461246 -49043307 + AluSg/x SINE Alu 72 272 -38 899 154 0 0 chr17 40461343 40461479 -49043074 + AluSq/x SINE Alu 2 137 -175 2210 108 0 3 chr17 40461489 40461775 -49042778 + AluSx SINE Alu 16 300 -12 277 262 56 9 chr17 40461775 40461882 -49042671 + L1ME3 LINE L1 6043 6154 -8 490 231 62 78 chr17 40461926 40461952 -49042601 - L1MEc LINE L1 -3944 2452 2427 2430 77 3 3 chr17 40461952 40462250 -49042303 - AluSp SINE Alu -15 298 1 490 231 62 78 chr17 40462250 40462321 -49042232 - L1MEc LINE L1 -3969 2427 2356 1574 182 61 10 chr17 40462321 40462618 -49041935 - AluJb SINE Alu 0 312 1 490 231 62 78 chr17 40462618 40462761 -49041792 - L1MEc LINE L1 -4040 2356 2215 183 42 0 0 chr17 40462830 40462854 -49041699 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1975 145 0 0 chr17 40462856 40463138 -49041415 - AluSx SINE Alu -30 282 1 2206 134 0 0 chr17 40463139 40463445 -49041108 - AluSx SINE Alu -6 306 1 216 0 0 0 chr17 40463447 40463471 -49041082 + (ATTG)n Simple_repeat Simple_repeat 2 25 0 1907 143 21 3 chr17 40463472 40463759 -49040794 - AluSg SINE Alu -18 292 1 2448 250 35 29 chr17 40463763 40464155 -49040398 - L1MEc LINE L1 -5636 760 361 2333 94 3 3 chr17 40464155 40464454 -49040099 - AluSq SINE Alu -14 299 1 2448 250 35 29 chr17 40464454 40464780 -49039773 - L1MEc LINE L1 -6035 361 38 1393 144 0 47 chr17 40464827 40465063 -49039490 - AluJb SINE Alu -3 309 85 1553 172 20 40 chr17 40465100 40465396 -49039157 + AluJo SINE Alu 3 292 -20 305 133 0 0 chr17 40465471 40465560 -49038993 + Alu SINE Alu 238 326 0 652 259 40 81 chr17 40465573 40465740 -49038813 - MIR SINE MIR -12 250 95 2443 58 7 10 chr17 40465740 40466034 -49038519 + AluY SINE Alu 1 293 -18 652 259 40 81 chr17 40466034 40466113 -49038440 - MIR SINE MIR -167 95 14 1217 142 0 0 chr17 40466329 40466505 -49038048 - AluSg/x SINE Alu 0 312 137 2256 128 0 0 chr17 40466506 40466810 -49037743 - AluSq SINE Alu -9 304 1 212 377 87 14 chr17 40467093 40467231 -49037322 - L2 LINE L2 -3 3310 3163 1195 154 51 28 chr17 40467258 40467472 -49037081 - MER20 DNA MER1_type 0 219 1 1623 123 30 105 chr17 40468786 40469118 -49035435 + AluYb8 SINE Alu 5 311 -7 2160 118 31 0 chr17 40469556 40469843 -49034710 + AluSx SINE Alu 3 298 -14 2318 57 35 3 chr17 40469843 40470126 -49034427 + AluY SINE Alu 14 305 -6 2171 87 3 17 chr17 40470150 40470437 -49034116 + AluSx SINE Alu 24 306 -6 431 263 196 15 chr17 40471540 40471673 -49032880 - MER5A DNA MER1_type -6 183 27 1671 173 0 30 chr17 40473022 40473203 -49031350 - AluJo SINE Alu -20 292 122 2628 44 0 0 chr17 40473203 40473499 -49031054 + AluY SINE Alu 1 296 -15 1671 173 0 30 chr17 40473499 40473618 -49030935 - AluJo SINE Alu -190 122 1 2078 105 46 0 chr17 40474254 40474539 -49030014 - AluSx SINE Alu -14 298 1 2043 89 19 0 chr17 40474539 40474798 -49029755 - AluSg SINE Alu -14 296 33 1218 158 0 0 chr17 40474798 40474981 -49029572 - FRAM SINE Alu -1 175 1 1816 187 3 0 chr17 40474988 40475293 -49029260 - AluJb SINE Alu -6 306 1 2310 113 3 6 chr17 40475297 40475608 -49028945 - AluSx SINE Alu -2 310 1 231 218 0 0 chr17 40475630 40475685 -49028868 + (TG)n Simple_repeat Simple_repeat 1 55 0 2051 125 7 3 chr17 40476033 40476328 -49028225 - AluJb SINE Alu -16 296 1 22 35 0 0 chr17 40476430 40476459 -49028094 + AT_rich Low_complexity Low_complexity 1 29 0 461 287 88 27 chr17 40476554 40476966 -49027587 - MLT1J LTR MaLR -12 499 21 241 210 0 48 chr17 40476996 40477058 -49027495 + CT-rich Low_complexity Low_complexity 1 59 0 1761 149 13 48 chr17 40477069 40477378 -49027175 - AluJb SINE Alu -7 305 8 225 266 216 7 chr17 40477401 40477540 -49027013 + L2 LINE L2 2124 2291 -1023 237 391 47 44 chr17 40477929 40478269 -49026284 + L2 LINE L2 2920 3260 -12 1287 261 66 5 chr17 40478286 40478302 -49026251 + L1ME3 LINE L1 5680 5694 -468 2226 117 0 0 chr17 40478302 40478610 -49025943 + AluSx SINE Alu 1 308 -4 1287 261 66 5 chr17 40478610 40479036 -49025517 + L1ME3 LINE L1 5694 6145 -17 1693 178 3 16 chr17 40479083 40479217 -49025336 + AluJb SINE Alu 1 135 -177 2002 95 21 32 chr17 40479217 40479502 -49025051 + AluSx SINE Alu 15 296 -16 2302 98 0 0 chr17 40479504 40479810 -49024743 + AluSg SINE Alu 1 306 -4 1693 178 3 16 chr17 40479810 40479976 -49024577 + AluJb SINE Alu 136 300 -12 200 207 85 24 chr17 40480000 40480099 -49024454 - MIR SINE MIR -57 151 64 468 238 50 56 chr17 40480341 40480397 -49024156 + MIR SINE MIR 103 158 -104 2107 109 0 3 chr17 40480397 40480732 -49023821 + AluSx SINE Alu 1 334 0 468 238 50 56 chr17 40480732 40480834 -49023719 + MIR SINE MIR 158 261 -1 442 224 112 9 chr17 40480854 40481008 -49023545 + MIR SINE MIR 38 217 -45 259 286 66 11 chr17 40481290 40481381 -49023172 - L2 LINE L2 -4 3309 3214 1559 146 6 73 chr17 40481510 40481826 -49022727 - AluJo SINE Alu -12 300 6 192 316 163 50 chr17 40482422 40483170 -49021383 - L2 LINE L2 -681 2633 1801 985 225 175 81 chr17 40483737 40484128 -49020425 + MLT1D LTR MaLR 1 443 -62 2190 94 0 7 chr17 40484128 40484425 -49020128 - AluSc SINE Alu -14 295 1 985 225 175 81 chr17 40484425 40484491 -49020062 + MLT1D LTR MaLR 443 501 -4 186 43 0 0 chr17 40485096 40485119 -49019434 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 24 32 0 0 chr17 40488059 40488090 -49016463 + GC_rich Low_complexity Low_complexity 1 31 0 23 101 0 0 chr17 40488260 40488339 -49016214 + GC_rich Low_complexity Low_complexity 1 79 0 211 211 58 0 chr17 40488848 40488900 -49015653 + MIR SINE MIR 199 253 -9 596 270 86 17 chr17 40489235 40489468 -49015085 + L2 LINE L2 3065 3313 0 414 0 0 0 chr17 40490003 40490049 -49014504 + (CA)n Simple_repeat Simple_repeat 2 47 0 419 262 58 0 chr17 40490497 40490600 -49013953 + MIR SINE MIR 80 188 -74 202 241 190 0 chr17 40490964 40491043 -49013510 - MIR SINE MIR -10 252 159 2275 79 0 3 chr17 40491046 40491336 -49013217 - AluSc SINE Alu -20 289 1 380 155 66 0 chr17 40491343 40491442 -49013111 - L1MB8 LINE L1 0 6174 6062 991 149 13 0 chr17 40491449 40491603 -49012950 - AluY SINE Alu -23 288 133 2151 87 35 0 chr17 40491604 40491891 -49012662 - AluSx SINE Alu -15 297 1 1770 193 72 46 chr17 40491891 40492118 -49012435 - L1MB7 LINE L1 -111 6073 5854 2267 96 3 0 chr17 40492118 40492419 -49012134 - AluSp SINE Alu -11 302 1 1770 193 72 46 chr17 40492419 40492635 -49011918 - L1MB7 LINE L1 -330 5854 5645 1788 148 6 19 chr17 40492635 40492946 -49011607 - AluJo SINE Alu -5 307 1 1770 193 72 46 chr17 40492946 40492973 -49011580 - L1MB7 LINE L1 -539 5645 5620 1767 169 20 0 chr17 40492973 40493275 -49011278 + AluJb SINE Alu 1 308 -4 1770 193 72 46 chr17 40493275 40493326 -49011227 - L1MB7 LINE L1 -564 5620 5536 1989 112 6 38 chr17 40493337 40493474 -49011079 + AluSx SINE Alu 1 141 -171 2025 112 4 0 chr17 40493474 40493783 -49010770 + AluSc SINE Alu 1 310 0 1989 112 6 38 chr17 40493783 40493956 -49010597 + AluSx SINE Alu 141 303 -9 513 227 70 0 chr17 40493957 40494085 -49010468 - MIR SINE MIR -119 143 7 414 312 53 18 chr17 40494251 40494421 -49010132 + MIR SINE MIR 16 191 -71 413 224 48 16 chr17 40494422 40494547 -49010006 - L1MC5 LINE L1 -48 7913 7785 1333 186 46 11 chr17 40494578 40494858 -49009695 + AluJb SINE Alu 11 300 -12 372 198 69 0 chr17 40494867 40494968 -49009585 - L1ME2 LINE L1 -9 6155 6048 2275 55 41 3 chr17 40494972 40495263 -49009290 + AluY SINE Alu 1 302 -9 2124 124 0 19 chr17 40495279 40495593 -49008960 + AluSx SINE Alu 1 308 -4 1815 164 23 3 chr17 40495625 40495930 -49008623 - AluJb SINE Alu -1 311 1 838 187 57 105 chr17 40495946 40496076 -49008477 - L1MC5 LINE L1 -183 7778 7643 2075 137 0 13 chr17 40496076 40496382 -49008171 + AluSx SINE Alu 1 302 -10 838 187 57 105 chr17 40496382 40496669 -49007884 - L1MC5 LINE L1 -318 7643 7381 1943 109 6 59 chr17 40496738 40497060 -49007493 + AluSq SINE Alu 1 305 -8 267 129 129 14 chr17 40497086 40497156 -49007397 + MER53 DNA DNA 112 189 0 425 217 70 43 chr17 40497156 40497271 -49007282 - L2 LINE L2 -36 3277 3160 1819 158 0 20 chr17 40497318 40497616 -49006937 + AluJo SINE Alu 6 297 -15 2237 102 3 0 chr17 40497643 40497948 -49006605 + AluSx SINE Alu 1 306 -6 301 337 117 56 chr17 40498139 40498404 -49006149 - L2 LINE L2 0 3272 2980 1951 132 3 28 chr17 40498404 40498722 -49005831 + AluSx SINE Alu 1 310 -2 301 337 117 56 chr17 40498722 40498797 -49005756 - L2 LINE L2 -292 2980 2911 882 327 146 10 chr17 40498939 40499666 -49004887 + L2 LINE L2 1684 2509 -805 1440 129 0 52 chr17 40499734 40499919 -49004634 - AluJb SINE Alu -13 299 127 2213 86 7 0 chr17 40499919 40500211 -49004342 + AluSp SINE Alu 1 294 -19 1440 129 0 52 chr17 40500211 40500257 -49004296 - AluJb SINE Alu -185 127 80 455 277 0 0 chr17 40500264 40500365 -49004188 + FLAM_A SINE Alu 12 112 -30 2208 113 0 0 chr17 40500402 40500703 -49003850 - AluSx SINE Alu -11 301 1 306 315 50 20 chr17 40500793 40500993 -49003560 + L2 LINE L2 2856 3061 -211 2206 122 0 0 chr17 40501065 40501369 -49003184 + AluSx SINE Alu 1 304 -8 2295 87 0 10 chr17 40501519 40501818 -49002735 - AluY SINE Alu -15 296 1 899 198 0 0 chr17 40501827 40501984 -49002569 - FRAM SINE Alu -12 164 8 450 294 20 44 chr17 40502066 40502080 -49002473 - L1MC5 LINE L1 -204 7757 7744 1872 126 21 0 chr17 40502080 40502366 -49002187 + AluSx SINE Alu 1 292 -20 450 294 20 44 chr17 40502366 40502555 -49001998 - L1MC5 LINE L1 -217 7744 7559 497 216 14 58 chr17 40502559 40502698 -49001855 - FLAM_A SINE Alu 0 133 1 231 36 0 0 chr17 40502700 40502728 -49001825 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1051 9 0 0 chr17 40502728 40502844 -49001709 - L1PA5 LINE L1 -12 6142 6027 234 0 0 0 chr17 40502844 40502870 -49001683 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 814 143 0 0 chr17 40502872 40502991 -49001562 - FLAM_C SINE Alu -24 119 1 439 266 108 37 chr17 40502993 40503234 -49001319 - L1MC5 LINE L1 -393 7568 7311 189 291 63 70 chr17 40503317 40503394 -49001159 - MIR SINE MIR -41 221 145 2176 110 7 3 chr17 40503394 40503702 -49000851 + AluSx SINE Alu 1 309 -3 189 291 63 70 chr17 40503702 40503782 -49000771 - MIR SINE MIR -117 145 65 605 227 76 91 chr17 40505301 40505536 -48999017 - L2 LINE L2 -1 3312 3079 1930 110 48 7 chr17 40505536 40505833 -48998720 - AluSq SINE Alu 0 308 1 605 227 76 91 chr17 40505833 40505860 -48998693 - L2 LINE L2 -234 3079 3053 1874 149 3 3 chr17 40505862 40506150 -48998403 + AluJb SINE Alu 2 289 -23 1648 230 120 29 chr17 40506206 40506341 -48998212 - L2 LINE L2 -385 2929 2808 2187 117 7 0 chr17 40506341 40506648 -48997905 - AluSx SINE Alu -1 311 3 1648 230 120 29 chr17 40506648 40507029 -48997524 - L2 LINE L2 -506 2808 2366 926 220 43 56 chr17 40507830 40508134 -48996419 + L1ME2 LINE L1 5856 6155 -9 2235 122 0 0 chr17 40508138 40508450 -48996103 - AluSq SINE Alu -1 312 1 1602 171 0 4 chr17 40508485 40508742 -48995811 - AluJb SINE Alu -23 289 34 2027 137 0 0 chr17 40508770 40509062 -48995491 - AluSx SINE Alu -20 292 1 1992 112 21 14 chr17 40509079 40509366 -48995187 + AluSg SINE Alu 1 289 -21 2396 84 0 3 chr17 40509761 40510072 -48994481 - AluSg SINE Alu 0 310 1 392 66 0 16 chr17 40510124 40510185 -48994368 + (CA)n Simple_repeat Simple_repeat 2 61 0 332 345 29 24 chr17 40510508 40510714 -48993839 + L2 LINE L2 2041 2247 -1067 204 232 256 24 chr17 40510837 40510962 -48993591 + L2 LINE L2 2318 2471 -843 376 218 127 9 chr17 40511057 40511167 -48993386 - L2 LINE L2 0 3313 3191 240 377 55 14 chr17 40511443 40511589 -48992964 + L2 LINE L2 3121 3272 0 470 209 47 0 chr17 40511732 40511818 -48992735 + AluJ/FLAM SINE Alu 1 90 -222 959 114 0 0 chr17 40511820 40511951 -48992602 + AluSg SINE Alu 1 131 -179 2358 67 7 0 chr17 40511972 40512270 -48992283 + AluSp SINE Alu 1 300 -13 310 270 214 0 chr17 40512337 40512463 -48992090 - MIR3 SINE MIR -1 207 55 339 278 139 0 chr17 40512468 40512583 -48991970 + MIR SINE MIR 132 262 0 262 333 167 0 chr17 40512723 40512963 -48991590 + L2 LINE L2 1813 2092 -1222 1219 91 0 18 chr17 40513205 40513370 -48991183 - AluSg/x SINE Alu -17 295 134 2165 94 10 7 chr17 40513370 40513668 -48990885 - AluSg1 SINE Alu -10 299 1 263 305 53 63 chr17 40513668 40514021 -48990532 + L2 LINE L2 2924 3272 0 2274 93 3 0 chr17 40514087 40514397 -48990156 + AluY SINE Alu 1 311 0 375 253 88 7 chr17 40514490 40514634 -48989919 - MIR3 SINE MIR 0 208 39 397 247 110 32 chr17 40515189 40515343 -48989210 - MIR SINE MIR -75 187 22 24 53 0 0 chr17 40515793 40515831 -48988722 + GC_rich Low_complexity Low_complexity 1 38 0 375 274 124 20 chr17 40516023 40516176 -48988377 - MIR SINE MIR -17 245 77 490 320 13 7 chr17 40516508 40516661 -48987892 + MIR SINE MIR 43 196 -66 21 0 0 0 chr17 40517404 40517425 -48987128 + GC_rich Low_complexity Low_complexity 1 21 0 363 292 153 14 chr17 40518046 40518190 -48986363 + L2 LINE L2 3109 3272 0 341 189 39 31 chr17 40518577 40518704 -48985849 + (CGGG)n Simple_repeat Simple_repeat 3 130 0 286 172 0 23 chr17 40518889 40518976 -48985577 + GA-rich Low_complexity Low_complexity 2 86 0 230 111 0 79 chr17 40518992 40519055 -48985498 + (CCCCCG)n Simple_repeat Simple_repeat 3 60 0 47 33 0 0 chr17 40519193 40519254 -48985299 + GC_rich Low_complexity Low_complexity 1 61 0 377 256 44 15 chr17 40520695 40520832 -48983721 - L1MC5 LINE L1 -36 7925 7785 644 288 120 54 chr17 40521558 40521926 -48982627 - L2 LINE L2 0 3313 2922 203 236 255 19 chr17 40521937 40521990 -48982563 - L2 LINE L2 -73 3199 3160 1023 208 19 33 chr17 40521990 40522056 -48982497 - MER3 DNA MER1_type 0 209 144 2087 113 7 10 chr17 40522056 40522366 -48982187 + AluSx SINE Alu 1 309 -3 1023 208 19 33 chr17 40522366 40522511 -48982042 - MER3 DNA MER1_type -65 144 1 203 236 255 19 chr17 40522511 40522614 -48981939 - L2 LINE L2 -112 3160 3006 315 359 73 9 chr17 40523082 40523302 -48981251 - L2 LINE L2 -34 3238 3005 531 278 41 46 chr17 40523312 40523506 -48981047 - MIR SINE MIR 0 262 70 234 312 50 78 chr17 40523850 40524132 -48980421 - L2 LINE L2 -571 2743 2470 735 197 0 8 chr17 40524147 40524279 -48980274 - MER94 DNA DNA 0 134 4 255 274 73 61 chr17 40524509 40524673 -48979880 - L2 LINE L2 -1335 1979 1814 205 333 71 42 chr17 40524948 40525116 -48979437 + MIR3 SINE MIR 9 181 -27 730 236 28 6 chr17 40527545 40527723 -48976830 - MIR SINE MIR -65 197 16 2290 92 0 16 chr17 40527897 40528211 -48976342 + AluSq SINE Alu 1 309 -4 270 372 71 10 chr17 40528402 40528598 -48975955 - L2 LINE L2 -194 3078 2871 264 100 0 0 chr17 40529207 40529247 -48975306 + (TCC)n Simple_repeat Simple_repeat 2 41 0 294 269 90 64 chr17 40529488 40529732 -48974821 - MIR SINE MIR -4 258 20 314 152 35 44 chr17 40531513 40531534 -48973019 + 7SLRNA srpRNA srpRNA 232 252 -68 2427 64 0 0 chr17 40531534 40531830 -48972723 + AluSq SINE Alu 1 296 -17 314 152 35 44 chr17 40531830 40531923 -48972630 + 7SLRNA srpRNA srpRNA 252 314 -6 285 278 165 9 chr17 40531990 40532105 -48972448 - MIR SINE MIR -58 150 18 223 203 0 34 chr17 40533730 40533789 -48970764 + C-rich Low_complexity Low_complexity 3 59 0 377 291 198 17 chr17 40534321 40534558 -48969995 - L2 LINE L2 -2 3311 3032 253 246 31 0 chr17 40534653 40534718 -48969835 + MIR SINE MIR 32 98 -110 568 326 79 9 chr17 40534729 40534956 -48969597 - MIR SINE MIR 0 262 20 264 277 27 54 chr17 40534915 40535027 -48969526 + MIR SINE MIR 50 158 -104 * 210 250 0 68 chr17 40535374 40535462 -48969091 + C-rich Low_complexity Low_complexity 5 86 0 1801 144 36 13 chr17 40536662 40536967 -48967586 + AluJb SINE Alu 1 312 0 300 345 90 28 chr17 40537033 40537184 -48967369 + L1MC4a LINE L1 6071 6236 -1572 2396 80 0 0 chr17 40537184 40537483 -48967070 - AluSq SINE Alu -13 300 2 300 345 90 28 chr17 40537483 40537508 -48967045 + L1MC4a LINE L1 6236 6258 -1550 1381 93 6 0 chr17 40537515 40537724 -48966829 + AluSg/x SINE Alu 98 307 0 219 88 0 0 chr17 40538298 40538332 -48966221 + (CAG)n Simple_repeat Simple_repeat 3 36 0 411 83 0 0 chr17 40539788 40539848 -48964705 + (TG)n Simple_repeat Simple_repeat 2 61 0 220 208 0 0 chr17 40540537 40540590 -48963963 + T-rich Low_complexity Low_complexity 2 54 0 2232 92 27 0 chr17 40540962 40541257 -48963296 + AluSx SINE Alu 1 303 -9 213 243 18 36 chr17 40543720 40543831 -48960722 + (CGGG)n Simple_repeat Simple_repeat 3 111 0 237 181 56 14 chr17 40543855 40543927 -48960626 + (CCCCAG)n Simple_repeat Simple_repeat 1 75 0 1010 74 0 0 chr17 40545241 40545362 -48959191 - 5S rRNA rRNA 0 121 1 210 188 213 75 chr17 40545776 40545794 -48958759 + MIR SINE MIR 39 53 -155 1427 151 38 38 chr17 40545794 40546085 -48958468 + AluJb SINE Alu 1 291 -21 210 188 213 75 chr17 40546085 40546146 -48958407 + MIR SINE MIR 53 129 -79 182 308 266 7 chr17 40546147 40546290 -48958263 - L3 LINE CR1 -103 1474 1295 291 28 0 0 chr17 40546380 40546416 -48958137 + (CA)n Simple_repeat Simple_repeat 2 37 0 223 250 19 0 chr17 40546585 40546637 -48957916 - MIR SINE MIR -207 55 3 26 0 0 0 chr17 40548518 40548544 -48956009 + AT_rich Low_complexity Low_complexity 1 26 0 324 156 0 248 chr17 40549934 40549994 -48954559 - MER5B DNA MER1_type -3 175 102 2515 58 0 0 chr17 40549994 40550304 -48954249 + AluY SINE Alu 1 310 -1 324 156 0 248 chr17 40550304 40550316 -48954237 - MER5B DNA MER1_type -76 102 89 1709 116 89 20 chr17 40550316 40550609 -48953944 + AluSp SINE Alu 1 313 0 324 156 0 248 chr17 40550609 40550622 -48953931 - MER5B DNA MER1_type -89 89 133 1821 159 27 0 chr17 40550622 40550918 -48953635 + AluSq SINE Alu 1 304 -9 324 156 0 248 chr17 40550918 40550971 -48953582 - MER5B DNA MER1_type -44 134 70 285 246 297 22 chr17 40551013 40551072 -48953481 + MER5A DNA MER1_type 8 50 -139 2351 76 3 3 chr17 40551072 40551375 -48953178 + AluSg SINE Alu 1 303 -7 285 246 297 22 chr17 40551375 40551453 -48953100 + MER5A DNA MER1_type 50 183 -6 2399 82 0 0 chr17 40553919 40554222 -48950331 + AluY SINE Alu 1 303 -8 912 150 0 96 chr17 40554547 40554734 -48949819 + AluJb SINE Alu 136 304 -8 1865 131 27 20 chr17 40556534 40556832 -48947721 - AluSx SINE Alu -12 300 1 2289 110 0 0 chr17 40557785 40558095 -48946458 - AluSx SINE Alu 0 312 3 483 255 96 64 chr17 40558331 40558374 -48946179 - MIR3 SINE MIR -14 194 154 1971 128 7 13 chr17 40558374 40558502 -48946051 + AluSg1 SINE Alu 1 128 -181 2251 81 0 7 chr17 40558502 40558798 -48945755 + AluSc SINE Alu 11 304 -5 1971 128 7 13 chr17 40558798 40558974 -48945579 + AluSg1 SINE Alu 128 303 -6 483 255 96 64 chr17 40558974 40559118 -48945435 - MIR3 SINE MIR -54 154 1 27 62 0 0 chr17 40561005 40561053 -48943500 + GC_rich Low_complexity Low_complexity 1 48 0 223 89 0 44 chr17 40561663 40561708 -48942845 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 223 68 0 45 chr17 40561788 40561832 -48942721 + (GGGGA)n Simple_repeat Simple_repeat 2 43 0 196 286 82 61 chr17 40563958 40564056 -48940497 - L2 LINE L2 -27 3245 3146 191 53 0 79 chr17 40565176 40565214 -48939339 + (A)n Simple_repeat Simple_repeat 1 35 0 698 13 0 0 chr17 40565219 40565296 -48939257 - tRNA-Asn-AAC tRNA tRNA 0 77 1 220 278 0 0 chr17 40565719 40565773 -48938780 - L2 LINE L2 -6 3307 3254 213 242 129 0 chr17 40565780 40565842 -48938711 + L2 LINE L2 3244 3313 0 2252 110 0 0 chr17 40566921 40567220 -48937333 - AluSx SINE Alu -13 299 1 2204 122 0 0 chr17 40567629 40567941 -48936612 + AluSx SINE Alu 1 312 0 278 245 113 28 chr17 40568163 40568269 -48936284 + MIR3 SINE MIR 93 207 -1 1465 160 51 8 chr17 40568456 40568712 -48935841 - AluJo SINE Alu -45 267 1 550 100 110 70 chr17 40568723 40568805 -48935748 - U6 snRNA snRNA -3 104 27 2286 64 3 14 chr17 40568805 40569101 -48935452 + AluY SINE Alu 1 293 -18 216 0 0 0 chr17 40569101 40569125 -48935428 + (TA)n Simple_repeat Simple_repeat 2 25 0 306 0 0 0 chr17 40569124 40569158 -48935395 + (TG)n Simple_repeat Simple_repeat 1 34 0 550 100 110 70 chr17 40569125 40569174 -48935379 - U6 snRNA snRNA -79 28 1 2089 127 10 0 chr17 40569935 40570234 -48934319 - AluSx SINE Alu -10 302 1 1707 126 43 47 chr17 40570320 40570621 -48933932 - AluSx SINE Alu -11 301 2 2134 122 3 0 chr17 40570679 40570974 -48933579 + AluSx SINE Alu 2 297 -15 1736 101 0 0 chr17 40570976 40571204 -48933349 + AluSc SINE Alu 1 228 -81 1372 116 11 0 chr17 40571206 40571395 -48933158 - AluSq SINE Alu -122 191 1 1793 154 13 16 chr17 40571775 40572086 -48932467 - AluJo SINE Alu -2 310 1 2177 75 7 0 chr17 40572206 40572508 -48932045 + AluY SINE Alu 1 304 0 1389 197 45 3 chr17 40572648 40572938 -48931615 - Tigger5 DNA MER2_type -2019 304 3 2436 70 0 10 chr17 40572974 40573288 -48931265 - AluY SINE Alu 0 311 1 364 295 50 14 chr17 40574370 40574509 -48930044 + MIR SINE MIR 40 183 -79 2254 77 13 7 chr17 40574509 40574808 -48929745 + AluSp SINE Alu 1 301 -12 251 267 67 19 chr17 40575412 40575517 -48929036 - L2 LINE L2 -917 2397 2288 * 308 255 49 64 chr17 40575492 40575653 -48928900 - MIR SINE MIR -7 201 42 2170 108 13 3 chr17 40576516 40576822 -48927731 + AluSx SINE Alu 1 309 -3 2405 69 0 7 chr17 40576939 40577243 -48927310 - AluSg SINE Alu -8 302 1 366 326 154 0 chr17 40577820 40577995 -48926558 - MIR SINE MIR -12 250 49 442 289 74 0 chr17 40578111 40578260 -48926293 - MER5B DNA MER1_type -1 177 18 693 162 221 0 chr17 40578308 40578462 -48926091 - MER5A DNA MER1_type -1 188 1 21 0 0 0 chr17 40578571 40578592 -48925961 + GC_rich Low_complexity Low_complexity 1 21 0 1720 166 64 0 chr17 40578657 40578940 -48925613 - AluJb SINE Alu -11 301 1 189 74 0 0 chr17 40580956 40580983 -48923570 + (CA)n Simple_repeat Simple_repeat 2 28 0 211 200 0 0 chr17 40584603 40584648 -48919905 + CT-rich Low_complexity Low_complexity 2 46 0 189 296 56 0 chr17 40584829 40584900 -48919653 - L2 LINE L2 -64 3208 3134 598 102 31 0 chr17 40584915 40585013 -48919540 + AluJb SINE Alu 207 307 -5 1816 170 0 3 chr17 40585188 40585471 -48919082 + AluJo SINE Alu 1 282 -30 230 323 21 0 chr17 40585564 40585651 -48918902 - MER112 DNA MER1_type -6 254 166 2725 155 45 23 chr17 40585651 40586031 -48918522 + Tigger7 DNA MER2_type 1 396 -2091 2207 110 10 3 chr17 40586031 40586322 -48918231 - AluSx SINE Alu -19 293 1 2725 155 45 23 chr17 40586322 40586456 -48918097 + Tigger7 DNA MER2_type 396 526 -1961 672 101 0 73 chr17 40586433 40586542 -48918011 + Tigger7 DNA MER2_type 2487 2587 0 * 339 215 224 0 chr17 40586545 40586652 -48917901 - MER112 DNA MER1_type -96 164 34 191 250 21 0 chr17 40586838 40586886 -48917667 + MIR SINE MIR 97 145 -63 2319 139 26 55 chr17 40587507 40587570 -48916983 + L1MB3 LINE L1 5684 5747 -436 1303 206 46 90 chr17 40587570 40587928 -48916625 + MLT2D LTR ERVL 1 338 -76 2597 68 0 6 chr17 40587928 40588239 -48916314 + AluY SINE Alu 1 309 -2 1303 206 46 90 chr17 40588239 40588313 -48916240 + MLT2D LTR ERVL 338 414 0 2319 139 26 55 chr17 40588313 40588382 -48916171 + L1MB3 LINE L1 5747 5817 -366 207 0 0 0 chr17 40588382 40588405 -48916148 + (TG)n Simple_repeat Simple_repeat 2 24 0 2438 61 0 14 chr17 40588405 40588694 -48915859 - AluY SINE Alu -26 285 1 1539 210 20 10 chr17 40588694 40588988 -48915565 - AluJo SINE Alu -14 298 1 2319 139 26 55 chr17 40588988 40589017 -48915536 + L1MB3 LINE L1 5815 5843 -340 2501 80 0 6 chr17 40589017 40589328 -48915225 + AluSc SINE Alu 1 309 0 2319 139 26 55 chr17 40589328 40589413 -48915140 + L1MB3 LINE L1 5843 5929 -254 2095 97 64 17 chr17 40589413 40589711 -48914842 - AluSp SINE Alu -1 312 1 2319 139 26 55 chr17 40589711 40589933 -48914620 + L1MB3 LINE L1 5929 6138 -45 1091 108 12 30 chr17 40589933 40590099 -48914454 + AluSc SINE Alu 147 309 0 928 200 6 0 chr17 40590345 40590505 -48914048 - AluJb SINE Alu -18 294 134 1827 154 4 4 chr17 40590506 40590785 -48913768 - AluJo SINE Alu -12 300 22 286 318 45 0 chr17 40591967 40592077 -48912476 - L2 LINE L2 -19 3294 3180 271 302 75 4 chr17 40594365 40594487 -48910066 + MIR SINE MIR 48 177 -31 2040 149 0 0 chr17 40594962 40595258 -48909295 - AluJb SINE Alu -16 296 1 1033 150 12 0 chr17 40595258 40595418 -48909135 - AluJo SINE Alu -4 298 137 2435 70 6 29 chr17 40596347 40596660 -48907893 + AluSq SINE Alu 1 306 -7 2256 113 3 3 chr17 40597036 40597338 -48907215 - AluSq SINE Alu -7 306 5 969 108 0 23 chr17 40597847 40597977 -48906576 - AluJo SINE Alu -185 127 1 260 282 261 7 chr17 40598001 40598143 -48906410 + MER5A DNA MER1_type 7 184 -5 273 272 12 0 chr17 40598152 40598233 -48906320 + L1ME3A LINE L1 6080 6161 -9 2309 89 6 22 chr17 40598831 40599147 -48905406 + AluSq SINE Alu 1 311 -2 1568 186 84 0 chr17 40600480 40600754 -48903799 - AluJo SINE Alu -15 297 1 224 241 19 0 chr17 40600838 40600892 -48903661 + L2 LINE L2 3010 3064 -208 2321 118 0 13 chr17 40601024 40601339 -48903214 - AluSq SINE Alu -2 311 1 211 279 0 44 chr17 40601385 40601453 -48903100 + L2 LINE L2 3206 3270 -2 2328 82 0 0 chr17 40601619 40601941 -48902612 - AluY SINE Alu 0 322 1 1726 163 13 48 chr17 40602016 40602149 -48902404 + AluJo SINE Alu 1 137 -175 1807 115 32 8 chr17 40602149 40602402 -48902151 + AluSq SINE Alu 40 298 -15 1726 163 13 48 chr17 40602402 40602581 -48901972 + AluJo SINE Alu 137 302 -10 967 204 54 37 chr17 40603295 40603574 -48900979 + L1ME2 LINE L1 5888 6330 -4 494 113 0 0 chr17 40603847 40603918 -48900635 + AluS SINE Alu 2 72 -237 2211 111 0 0 chr17 40603919 40604198 -48900355 - AluSg SINE Alu -31 279 1 315 275 9 28 chr17 40604729 40604838 -48899715 + L2 LINE L2 2714 2820 -494 2418 80 26 0 chr17 40604848 40605150 -48899403 - AluSp SINE Alu -3 310 1 181 304 89 0 chr17 40605163 40605242 -48899311 - L2 LINE L2 -5 3267 3182 2334 80 0 23 chr17 40605249 40605549 -48899004 + AluY SINE Alu 1 293 -18 1443 187 20 4 chr17 40605605 40605851 -48898702 - AluJb SINE Alu -28 284 35 335 137 41 41 chr17 40605864 40605937 -48898616 + L1MB1 LINE L1 5779 5851 -317 2422 85 0 0 chr17 40606375 40606670 -48897883 - AluSx SINE Alu -17 295 1 2461 82 3 0 chr17 40606681 40606985 -48897568 - AluSx SINE Alu -7 305 1 2022 148 0 3 chr17 40607039 40607343 -48897210 + AluJb SINE Alu 10 312 0 385 180 3 20 chr17 40607398 40607495 -48897058 + L1MB1 LINE L1 4940 5038 -1108 2141 170 54 5 chr17 40607495 40607936 -48896617 + L1MB1 LINE L1 5705 6167 -1 385 180 3 20 chr17 40607936 40607959 -48896594 + L1MB1 LINE L1 5038 5060 -1086 400 165 0 22 chr17 40607985 40608076 -48896477 + FLAM_A SINE Alu 53 141 -1 1389 127 26 98 chr17 40608077 40608259 -48896294 + L1M4 LINE L1 5021 5164 -982 2482 96 0 0 chr17 40608259 40608571 -48895982 + AluSx SINE Alu 1 312 0 1389 127 26 98 chr17 40608571 40608765 -48895788 + L1M4 LINE L1 5164 5370 -776 839 142 0 0 chr17 40608777 40608904 -48895649 + FLAM_C SINE Alu 12 138 -5 2198 137 0 0 chr17 40608910 40609216 -48895337 + AluSx SINE Alu 1 306 -6 1324 142 19 52 chr17 40609217 40609298 -48895255 + L1M4 LINE L1 5360 5442 -742 2264 116 3 0 chr17 40609298 40609601 -48894952 + AluSx SINE Alu 1 304 -8 1324 142 19 52 chr17 40609601 40609786 -48894767 + L1M4 LINE L1 5442 5617 -567 236 302 0 0 chr17 40610979 40611042 -48893511 + MIR SINE MIR 85 147 -61 203 250 75 50 chr17 40611946 40612066 -48892487 - L3 LINE CR1 -267 1310 1188 25 0 0 0 chr17 40612866 40612891 -48891662 + GC_rich Low_complexity Low_complexity 1 25 0 266 209 29 48 chr17 40612936 40613092 -48891461 + (CCCCG)n Simple_repeat Simple_repeat 1 153 0 2581 58 0 7 chr17 40614218 40614526 -48890027 - AluY SINE Alu -5 306 1 259 338 45 32 chr17 40616364 40616521 -48888032 - L3b LINE CR1 -11 1572 1414 2445 84 0 0 chr17 40616789 40617086 -48887467 + AluSx SINE Alu 1 297 -15 341 147 55 73 chr17 40617163 40617198 -48887355 + HAL1 LINE L1 1231 1265 -1242 1669 154 18 42 chr17 40617198 40617483 -48887070 + AluJo SINE Alu 2 279 -33 341 147 55 73 chr17 40617483 40617556 -48886997 + HAL1 LINE L1 1265 1337 -1170 506 293 33 87 chr17 40617559 40617829 -48886724 + HAL1 LINE L1 2035 2318 -189 1980 155 0 37 chr17 40617829 40617966 -48886587 + AluSx SINE Alu 1 142 -170 2315 81 27 3 chr17 40617966 40618262 -48886291 + AluSx SINE Alu 1 303 -9 2460 90 0 0 chr17 40618268 40618567 -48885986 + AluSp SINE Alu 3 301 -12 1980 155 0 37 chr17 40618567 40618745 -48885808 + AluSx SINE Alu 147 311 -1 506 293 33 87 chr17 40618745 40618898 -48885655 + HAL1 LINE L1 2318 2435 -72 853 161 0 0 chr17 40618929 40619053 -48885500 - FLAM_C SINE Alu -17 126 3 727 248 0 12 chr17 40619089 40619250 -48885303 - AluJo SINE Alu -27 285 127 2064 146 3 0 chr17 40619258 40619553 -48885000 - AluSx SINE Alu -16 296 1 2558 71 0 3 chr17 40620481 40620789 -48883764 + AluSx SINE Alu 1 307 -5 1795 184 3 0 chr17 40620916 40621215 -48883338 + AluJo SINE Alu 1 300 -12 2408 94 10 3 chr17 40621218 40621527 -48883026 + AluY SINE Alu 1 311 0 2359 102 3 0 chr17 40621544 40621847 -48882706 + AluSg SINE Alu 1 304 -6 1428 97 0 31 chr17 40621921 40621940 -48882613 + AluSp SINE Alu 120 138 -175 2126 134 3 0 chr17 40621940 40622238 -48882315 + AluSp SINE Alu 1 299 -14 1428 97 0 31 chr17 40622238 40622414 -48882139 + AluSp SINE Alu 138 309 -4 420 208 139 0 chr17 40622441 40622542 -48882011 + FLAM_A SINE Alu 21 135 -7 2551 66 3 0 chr17 40622587 40622891 -48881662 + AluSx SINE Alu 1 305 -7 335 325 68 0 chr17 40623742 40623859 -48880694 + L2 LINE L2 3148 3272 0 252 149 0 0 chr17 40623972 40624019 -48880534 + (TTC)n Simple_repeat Simple_repeat 2 48 0 2099 124 7 10 chr17 40624085 40624383 -48880170 + AluSx SINE Alu 7 303 -9 2227 112 0 16 chr17 40624390 40624693 -48879860 + AluSg SINE Alu 1 298 -12 2355 84 0 26 chr17 40624695 40625003 -48879550 + AluY SINE Alu 3 302 -9 2370 88 7 0 chr17 40625381 40625678 -48878875 - AluSp SINE Alu -14 299 1 1691 85 5 0 chr17 40625870 40626082 -48878471 + AluSp SINE Alu 84 296 -17 1146 92 0 114 chr17 40626417 40626601 -48877952 + AluSg/x SINE Alu 131 293 -17 2079 125 0 50 chr17 40626616 40626937 -48877616 + AluSx SINE Alu 1 305 -7 1840 166 0 0 chr17 40627008 40627285 -48877268 - AluJb SINE Alu -35 277 1 2491 81 0 0 chr17 40627293 40627602 -48876951 - AluY SINE Alu -2 309 1 460 222 0 0 chr17 40627604 40627703 -48876850 + L1MB3 LINE L1 6007 6105 -78 1255 64 19 0 chr17 40627715 40627871 -48876682 - AluYa5 SINE Alu -2 309 151 2518 58 0 19 chr17 40627900 40628209 -48876344 + AluY SINE Alu 1 303 -8 2027 110 18 4 chr17 40628721 40629013 -48875540 + AluSx SINE Alu 7 302 0 1923 142 16 26 chr17 40629684 40629993 -48874560 - AluJo SINE Alu -6 306 1 2046 130 7 3 chr17 40630130 40630423 -48874130 - AluSg SINE Alu -16 294 1 2102 137 0 3 chr17 40630500 40630800 -48873753 + AluSg SINE Alu 1 299 -11 2154 99 0 20 chr17 40630810 40630948 -48873605 + AluSx SINE Alu 1 140 -172 2187 113 0 0 chr17 40630948 40631259 -48873294 + AluSc SINE Alu 1 311 0 2154 99 0 20 chr17 40631259 40631437 -48873116 + AluSx SINE Alu 140 312 0 2337 117 0 0 chr17 40631437 40631746 -48872807 + AluSg SINE Alu 1 309 -1 2590 52 13 0 chr17 40631753 40632059 -48872494 + AluY SINE Alu 1 310 -1 1670 178 25 4 chr17 40632451 40632632 -48871921 - AluJo SINE Alu 0 314 138 1913 153 22 35 chr17 40632632 40632808 -48871745 - AluSx SINE Alu -3 309 132 2212 105 7 16 chr17 40632808 40633112 -48871441 - AluSx SINE Alu -11 301 1 2245 101 37 0 chr17 40633116 40633413 -48871140 - AluSx SINE Alu -4 308 1 1913 153 22 35 chr17 40633413 40633544 -48871009 - AluSx SINE Alu -183 129 1 1670 178 25 4 chr17 40633544 40633670 -48870883 - AluJo SINE Alu -176 138 1 186 302 0 73 chr17 40633783 40633879 -48870674 - MIR SINE MIR -95 167 79 441 313 92 26 chr17 40634037 40634264 -48870289 - MIR SINE MIR -15 247 6 2120 118 13 7 chr17 40634720 40635026 -48869527 + AluSx SINE Alu 1 308 -4 1996 111 38 3 chr17 40635220 40635509 -48869044 - AluSg SINE Alu -11 299 1 2286 105 3 0 chr17 40635509 40635803 -48868750 - AluSp SINE Alu -17 296 2 235 88 0 0 chr17 40636258 40636292 -48868261 - Alu SINE Alu -136 167 134 2290 70 49 7 chr17 40636292 40636579 -48867974 - AluY SINE Alu -12 299 1 2395 87 3 10 chr17 40636589 40636898 -48867655 - AluSg SINE Alu -3 307 1 228 227 15 0 chr17 40637101 40637167 -48867386 + (TCCG)n Simple_repeat Simple_repeat 3 69 0 * 249 291 13 0 chr17 40637123 40637202 -48867351 + CT-rich Low_complexity Low_complexity 4 83 0 859 142 30 121 chr17 40637204 40637436 -48867117 + MER20 DNA MER1_type 9 219 0 2373 70 17 0 chr17 40637846 40638145 -48866408 + AluSp SINE Alu 1 304 -9 931 145 0 21 chr17 40639373 40639386 -48865167 - FLAM_C SINE Alu -170 142 130 1818 113 79 10 chr17 40639386 40639678 -48864875 - AluSq SINE Alu -1 312 1 931 145 0 21 chr17 40639678 40639809 -48864744 - FLAM_C SINE Alu -182 130 1 472 214 31 87 chr17 40639809 40639889 -48864664 - L1M4 LINE L1 -1676 4470 4387 2012 114 0 0 chr17 40639889 40640211 -48864342 - AluSx SINE Alu 0 342 21 472 214 31 87 chr17 40640211 40640357 -48864196 - L1M4 LINE L1 -1759 4387 4255 2220 113 3 13 chr17 40640372 40640682 -48863871 + AluSq SINE Alu 3 309 -4 2493 80 3 3 chr17 40640684 40640995 -48863558 + AluSp SINE Alu 1 311 -2 1907 140 7 0 chr17 40641057 40641335 -48863218 + AluJb SINE Alu 14 293 -19 2173 108 3 7 chr17 40641338 40641624 -48862929 + AluSx SINE Alu 1 285 -27 30 0 0 0 chr17 40641625 40641655 -48862898 + AT_rich Low_complexity Low_complexity 1 30 0 878 170 0 0 chr17 40641663 40641804 -48862749 + FLAM_C SINE Alu 1 141 -2 2847 140 15 93 chr17 40641819 40641954 -48862599 + L1MB8 LINE L1 5565 5709 -469 2200 122 0 7 chr17 40641954 40642258 -48862295 - AluSx SINE Alu -10 302 1 2847 140 15 93 chr17 40642258 40642318 -48862235 + L1MB8 LINE L1 5709 5772 -406 1507 173 71 42 chr17 40642318 40642601 -48861952 + AluSx SINE Alu 1 291 -21 2847 140 15 93 chr17 40642601 40642717 -48861836 + L1MB8 LINE L1 5772 5895 -283 2173 107 3 0 chr17 40642717 40643007 -48861546 + AluY SINE Alu 11 301 -10 2847 140 15 93 chr17 40643007 40643358 -48861195 + L1MB8 LINE L1 5895 6177 -1 2434 74 0 7 chr17 40643403 40643700 -48860853 - AluSc SINE Alu -14 295 1 526 221 18 35 chr17 40643770 40643883 -48860670 - FLAM_A SINE Alu -31 111 1 273 143 0 0 chr17 40643936 40643978 -48860575 - Alu SINE Alu -259 42 1 961 185 0 19 chr17 40644012 40644169 -48860384 + FRAM SINE Alu 1 154 -22 228 250 157 19 chr17 40644199 40644307 -48860246 + MER113 DNA MER1_type? 396 518 -3 1969 147 3 23 chr17 40644321 40644628 -48859925 + AluJo SINE Alu 1 301 -11 1953 66 117 12 chr17 40644698 40644984 -48859569 - AluY SINE Alu 0 313 1 198 103 0 0 chr17 40644995 40645024 -48859529 + (TTCC)n Simple_repeat Simple_repeat 1 29 0 376 318 151 32 chr17 40645024 40645270 -48859283 - HAL1 LINE L1 -1205 1302 1087 2533 74 3 3 chr17 40645270 40645581 -48858972 - AluY SINE Alu 0 311 1 2026 114 45 0 chr17 40645583 40645872 -48858681 - AluSq SINE Alu -10 303 2 376 318 151 32 chr17 40645872 40646000 -48858553 - HAL1 LINE L1 -1420 1087 880 2466 75 13 0 chr17 40646001 40646308 -48858245 - AluY SINE Alu 0 311 1 1783 86 0 5 chr17 40646308 40646530 -48858023 - AluSg/x SINE Alu -16 296 76 2350 74 3 7 chr17 40646530 40646825 -48857728 - AluSg SINE Alu -15 295 1 572 95 0 0 chr17 40647161 40647235 -48857318 - tRNA-Cys-TGC tRNA tRNA -1 74 1 1904 92 52 15 chr17 40647419 40647691 -48856862 + AluSx SINE Alu 1 282 -30 284 187 0 27 chr17 40647708 40647783 -48856770 + (CATATA)n Simple_repeat Simple_repeat 2 74 0 795 139 0 66 chr17 40647803 40647940 -48856613 - FLAM_C SINE Alu -14 129 2 2537 53 7 3 chr17 40647950 40648249 -48856304 - AluY SINE Alu -11 300 1 2404 83 0 3 chr17 40649355 40649655 -48854898 - AluSg SINE Alu -11 299 1 1489 188 4 0 chr17 40649772 40650011 -48854542 + AluJb SINE Alu 13 252 -60 2373 92 3 16 chr17 40650020 40650336 -48854217 - AluSx SINE Alu 0 312 1 341 191 0 29 chr17 40650336 40650404 -48854149 + AluYb8 SINE Alu 237 302 -6 2294 115 0 3 chr17 40650836 40651148 -48853405 + AluSq SINE Alu 1 311 -2 672 281 130 0 chr17 40651182 40651338 -48853215 + MIR SINE MIR 2 199 -63 2111 105 21 0 chr17 40651338 40651624 -48852929 - AluSx SINE Alu -20 292 1 672 281 130 0 chr17 40651624 40651698 -48852855 + MIR SINE MIR 199 262 0 22 35 0 0 chr17 40651735 40651764 -48852789 + AT_rich Low_complexity Low_complexity 1 29 0 1937 123 0 0 chr17 40651782 40652066 -48852487 + AluSx SINE Alu 24 307 0 1007 132 40 7 chr17 40652074 40652226 -48852327 + FRAM SINE Alu 1 157 -19 2451 102 0 3 chr17 40652244 40652557 -48851996 + AluSx SINE Alu 1 312 0 815 128 0 0 chr17 40652675 40652784 -48851769 + AluJb SINE Alu 7 115 -197 944 181 0 0 chr17 40652784 40652939 -48851614 + AluSg/x SINE Alu 156 310 0 2343 64 3 41 chr17 40652948 40653262 -48851291 + AluY SINE Alu 1 302 -9 1303 133 8 95 chr17 40653979 40654242 -48850311 + AluJb SINE Alu 40 279 -33 1209 87 12 153 chr17 40654261 40654515 -48850038 + AluY SINE Alu 93 310 -1 1427 166 90 10 chr17 40655287 40655576 -48848977 + AluJo SINE Alu 1 312 0 2504 35 11 0 chr17 40655585 40655872 -48848681 + AluY SINE Alu 1 290 -21 248 51 0 26 chr17 40655946 40655985 -48848568 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2143 97 0 4 chr17 40655987 40656265 -48848288 - AluSg1 SINE Alu -30 279 3 917 18 9 0 chr17 40656277 40656388 -48848165 + (TCTA)n Simple_repeat Simple_repeat 1 112 0 2098 124 0 0 chr17 40656388 40656670 -48847883 - AluSx SINE Alu -30 282 1 273 161 49 0 chr17 40656673 40656754 -48847799 + (TA)n Simple_repeat Simple_repeat 2 86 0 868 152 0 0 chr17 40656762 40656894 -48847659 - AluSg/x SINE Alu -47 265 134 2231 97 21 0 chr17 40656895 40657185 -48847368 - AluSx SINE Alu -16 296 1 2560 60 3 0 chr17 40657195 40657495 -48847058 - AluSp SINE Alu -12 301 1 1365 128 202 8 chr17 40657508 40657751 -48846802 - AluSg1 SINE Alu -4 305 16 954 116 0 22 chr17 40657751 40657889 -48846664 - AluSq/x SINE Alu -176 136 2 1652 198 3 0 chr17 40657925 40658223 -48846330 - AluSq SINE Alu -14 299 1 1057 150 53 0 chr17 40658355 40658542 -48846011 - AluSg/x SINE Alu -8 302 106 2428 87 0 13 chr17 40658571 40658746 -48845807 - AluSg SINE Alu -4 306 135 2445 67 0 10 chr17 40658746 40659046 -48845507 - AluY SINE Alu -14 297 1 2428 87 0 13 chr17 40659046 40659180 -48845373 - AluSg SINE Alu -175 135 1 2291 117 3 0 chr17 40659195 40659503 -48845050 - AluSq SINE Alu -1 312 4 2211 121 0 3 chr17 40659503 40659801 -48844752 - AluSq SINE Alu -16 297 1 2333 87 7 7 chr17 40659811 40660109 -48844444 - AluY SINE Alu -13 298 1 962 168 62 0 chr17 40660111 40660272 -48844281 - FRAM SINE Alu -14 162 1 260 208 0 11 chr17 40660299 40660372 -48844181 - AluSp SINE Alu -117 186 121 2374 82 6 13 chr17 40660540 40660855 -48843698 + AluSp SINE Alu 1 313 0 1127 100 0 0 chr17 40660858 40661008 -48843545 + AluSq SINE Alu 121 270 -43 1745 106 4 0 chr17 40661069 40661295 -48843258 - AluSx SINE Alu -85 227 1 608 282 35 6 chr17 40661356 40661530 -48843023 + AluJo SINE Alu 115 293 -19 1828 150 25 0 chr17 40661699 40661985 -48842568 - AluSx SINE Alu -17 295 3 518 217 101 8 chr17 40662036 40662165 -48842388 - MER5B DNA MER1_type -3 175 35 1667 130 52 26 chr17 40662824 40663094 -48841459 - AluSg SINE Alu -33 277 1 1134 155 11 6 chr17 40663341 40663515 -48841038 + AluSq SINE Alu 43 217 -96 216 0 0 0 chr17 40663685 40663709 -48840844 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 595 200 22 30 chr17 40664061 40664196 -48840357 - AluJb SINE Alu -109 203 70 1157 124 12 0 chr17 40665536 40665705 -48838848 + AluSg/x SINE Alu 130 300 -10 593 91 0 57 chr17 40665749 40665873 -48838680 + AluSg/x SINE Alu 199 317 0 2149 103 7 13 chr17 40667751 40668052 -48836501 - AluSx SINE Alu -13 299 1 565 184 22 140 chr17 40668111 40668339 -48836214 - L2 LINE L2 0 3313 3113 236 27 0 54 chr17 40668343 40668380 -48836173 + U2 snRNA snRNA 1 35 -153 2251 73 0 7 chr17 40668393 40668680 -48835873 + AluSg SINE Alu 1 285 -25 757 70 0 0 chr17 40669231 40669331 -48835222 - AluSp/q SINE Alu -1 312 213 230 51 51 0 chr17 40669337 40669376 -48835177 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 230 232 0 0 chr17 40669377 40669446 -48835107 + (TA)n Simple_repeat Simple_repeat 2 70 0 1198 145 9 53 chr17 40669464 40669600 -48834953 + AluSx SINE Alu 1 126 -186 2062 70 3 44 chr17 40669600 40669922 -48834631 + AluSp SINE Alu 1 310 0 1198 145 9 53 chr17 40669922 40670012 -48834541 + AluSx SINE Alu 126 218 -94 330 191 0 0 chr17 40670012 40670075 -48834478 + AluSq/x SINE Alu 84 146 -157 1901 125 10 14 chr17 40670075 40670364 -48834189 + AluSx SINE Alu 11 298 -14 1362 183 55 26 chr17 40670379 40670526 -48834027 + AluJo SINE Alu 3 164 -148 1937 133 0 14 chr17 40670526 40670831 -48833722 + AluSx SINE Alu 1 301 0 1362 183 55 26 chr17 40670831 40670955 -48833598 + AluJo SINE Alu 164 283 -29 1923 230 83 26 chr17 40670965 40671084 -48833469 - L2 LINE L2 -375 2939 2828 1931 121 7 14 chr17 40671084 40671366 -48833187 + AluSx SINE Alu 10 289 -23 1923 230 83 26 chr17 40671366 40671776 -48832777 - L2 LINE L2 -486 2828 2380 1998 125 10 16 chr17 40671999 40672311 -48832242 + AluSx SINE Alu 1 310 -2 2019 129 0 37 chr17 40672552 40672873 -48831680 - AluSq SINE Alu 0 310 1 2284 101 0 13 chr17 40673011 40673317 -48831236 - AluSx SINE Alu -10 302 1 813 107 149 20 chr17 40673318 40673480 -48831073 + L1MB3 LINE L1 6007 6175 -9 1995 90 83 42 chr17 40673480 40673769 -48830784 + AluSx SINE Alu 1 301 -11 813 107 149 20 chr17 40673769 40673781 -48830772 + L1MB3 LINE L1 6175 6184 0 207 173 0 39 chr17 40673804 40673856 -48830697 + A-rich Low_complexity Low_complexity 6 55 0 1956 141 0 10 chr17 40673868 40674159 -48830394 + AluSq SINE Alu 6 293 -20 966 144 0 13 chr17 40674163 40674316 -48830237 + FRAM SINE Alu 15 165 -11 834 103 0 26 chr17 40674328 40674445 -48830108 + AluJ SINE Alu 13 126 -186 358 322 0 0 chr17 40674448 40674538 -48830015 + L1MC4 LINE L1 6614 6703 -1339 319 208 0 0 chr17 40674545 40674598 -48829955 - L1MC4 LINE L1 -1340 6702 6650 1240 173 0 5 chr17 40674609 40674800 -48829753 + AluJ SINE Alu 111 300 -12 1297 155 77 35 chr17 40675033 40675406 -48829147 - MLT1J LTR MaLR -26 485 40 2022 141 13 0 chr17 40675406 40675705 -48828848 + AluSx SINE Alu 1 303 -9 1297 155 77 35 chr17 40675705 40675742 -48828811 - MLT1J LTR MaLR -471 40 6 2507 64 0 22 chr17 40676210 40676521 -48828032 - AluY SINE Alu -7 304 1 2240 125 3 0 chr17 40676551 40676856 -48827697 - AluSx SINE Alu -3 309 4 806 86 18 0 chr17 40676870 40676993 -48827560 + L1MC/D LINE L1 5468 5592 -586 362 168 0 15 chr17 40677004 40677078 -48827475 - AluJb SINE Alu -176 126 67 1075 147 6 0 chr17 40677087 40677244 -48827309 - FRAM SINE Alu -8 158 1 914 204 63 53 chr17 40677368 40677424 -48827129 - Charlie1b DNA MER1_type -2397 364 310 1440 178 87 8 chr17 40677424 40677688 -48826865 + AluJb SINE Alu 1 285 -17 564 81 54 0 chr17 40677614 40677689 -48826864 + AluJb SINE Alu 208 306 0 * 181 0 0 0 chr17 40677689 40677709 -48826844 + (TAAAA)n Simple_repeat Simple_repeat 5 25 0 914 204 63 53 chr17 40677709 40677968 -48826585 - Charlie1b DNA MER1_type -2450 311 44 2330 52 0 45 chr17 40677989 40678299 -48826254 + AluY SINE Alu 1 296 -15 2212 107 7 0 chr17 40678315 40678606 -48825947 + AluSx SINE Alu 1 293 -19 593 54 0 14 chr17 40678876 40678950 -48825603 - tRNA-Cys-TGC tRNA tRNA -2 73 1 2011 92 3 19 chr17 40679228 40679542 -48825011 - AluY SINE Alu -2 309 1 2336 60 7 0 chr17 40679777 40680078 -48824475 - AluSp SINE Alu -10 303 1 183 308 8 90 chr17 40680088 40680132 -48824421 + L2 LINE L2 3159 3205 -108 1969 120 24 0 chr17 40680132 40680424 -48824129 - AluSx SINE Alu -13 299 1 183 308 8 90 chr17 40680424 40680512 -48824041 + L2 LINE L2 3205 3280 -33 509 340 127 0 chr17 40680515 40680783 -48823770 + L2 LINE L2 1089 1390 -1924 2215 91 3 3 chr17 40680784 40681092 -48823461 - AluY SINE Alu -3 308 1 2111 131 0 3 chr17 40681272 40681584 -48822969 - AluSq SINE Alu -1 312 2 2085 129 3 0 chr17 40681585 40681896 -48822657 - AluSx SINE Alu 0 312 1 2311 172 15 77 chr17 40681939 40682360 -48822193 + MLT1D LTR MaLR 1 384 -121 2215 108 0 0 chr17 40682360 40682656 -48821897 - AluSg SINE Alu -14 296 1 2311 172 15 77 chr17 40682656 40682770 -48821783 + MLT1D LTR MaLR 384 503 -2 244 238 0 48 chr17 40682773 40682836 -48821717 + L2 LINE L2 2576 2635 -679 1595 167 89 11 chr17 40682837 40683119 -48821434 - AluJb SINE Alu -7 305 2 1686 138 56 0 chr17 40683121 40683425 -48821128 - L1MB1 LINE L1 -35 6133 5813 319 58 0 186 chr17 40683427 40683513 -48821040 - AluSp/q SINE Alu 0 303 234 2051 113 3 0 chr17 40683625 40683907 -48820646 + AluSp SINE Alu 1 283 -30 207 0 0 0 chr17 40683968 40683991 -48820562 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1983 90 55 17 chr17 40684001 40684291 -48820262 + AluSg SINE Alu 1 301 -9 1930 82 0 79 chr17 40684364 40684682 -48819871 - AluSg SINE Alu -17 293 1 629 41 0 0 chr17 40684832 40684905 -48819648 + tRNA-Cys-TGC tRNA tRNA 1 73 -2 957 123 159 0 chr17 40685807 40685970 -48818583 + MER5A DNA MER1_type 1 189 0 210 71 0 0 chr17 40686372 40686400 -48818153 + (T)n Simple_repeat Simple_repeat 1 28 0 645 27 0 0 chr17 40686478 40686551 -48818002 - tRNA-Cys-TGC tRNA tRNA -2 73 1 242 268 171 12 chr17 40689270 40689389 -48815164 + MIR SINE MIR 33 170 -63 268 164 0 33 chr17 40690200 40690261 -48814292 - L2 LINE L2 0 3313 3255 23 33 0 0 chr17 40690718 40690748 -48813805 + AT_rich Low_complexity Low_complexity 1 30 0 315 0 0 0 chr17 40692244 40692279 -48812274 + (TG)n Simple_repeat Simple_repeat 1 35 0 1281 116 0 0 chr17 40693358 40693530 -48811023 - AluSg/x SINE Alu -4 308 137 297 0 0 0 chr17 40693531 40693564 -48810989 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1995 112 0 11 chr17 40693564 40693851 -48810702 - AluSx SINE Alu -28 284 1 1989 56 116 4 chr17 40693921 40694189 -48810364 - AluY SINE Alu -13 298 1 393 314 58 12 chr17 40694335 40694507 -48810046 - MIR SINE MIR -19 243 64 205 235 39 0 chr17 40695494 40695545 -48809008 - MIR SINE MIR -72 190 138 259 341 71 0 chr17 40695582 40695708 -48808845 - MIR SINE MIR -125 137 3 261 75 0 0 chr17 40696146 40696186 -48808367 + (CATCC)n Simple_repeat Simple_repeat 3 42 0 2023 116 16 13 chr17 40696333 40696644 -48807909 - AluSx SINE Alu 0 312 1 27 29 0 0 chr17 40696652 40696686 -48807867 + AT_rich Low_complexity Low_complexity 1 34 0 229 286 0 78 chr17 40696950 40697027 -48807526 - L2 LINE L2 -2 3270 3200 1965 125 17 7 chr17 40698011 40698325 -48806228 + AluSx SINE Alu 1 312 0 219 308 0 0 chr17 40698354 40698406 -48806147 - L2 LINE L2 -11 3261 3210 1063 132 23 87 chr17 40698433 40698652 -48805901 - AluJb SINE Alu 0 312 108 2236 84 20 0 chr17 40699436 40699733 -48804820 - AluSx SINE Alu -9 303 1 1647 159 69 3 chr17 40700303 40700593 -48803960 + AluJb SINE Alu 1 309 -3 238 180 33 49 chr17 40700802 40700863 -48803690 - MIR3 SINE MIR -33 175 116 186 43 0 0 chr17 40700927 40700950 -48803603 + (T)n Simple_repeat Simple_repeat 1 23 0 2290 85 3 13 chr17 40701560 40701876 -48802677 - AluSq SINE Alu 0 313 1 2045 105 0 0 chr17 40701876 40702152 -48802401 - AluSx SINE Alu -9 303 27 300 293 49 24 chr17 40702407 40702530 -48802023 + MIR SINE MIR 89 214 -48 527 108 10 0 chr17 40703269 40703371 -48801182 + (TC)n Simple_repeat Simple_repeat 1 103 0 786 180 7 0 chr17 40704082 40704221 -48800332 - FLAM_C SINE Alu -3 140 1 227 215 77 0 chr17 40704868 40704933 -48799620 - MIR SINE MIR -80 128 59 2097 123 10 0 chr17 40705472 40705765 -48798788 - AluSx SINE Alu -16 296 1 369 260 96 51 chr17 40705769 40705946 -48798607 - L2 LINE L2 0 3313 3129 264 177 48 16 chr17 40705962 40706024 -48798529 + MIR3 SINE MIR 124 187 -21 503 287 122 16 chr17 40706097 40706285 -48798268 + MIR SINE MIR 12 219 -43 2158 100 0 3 chr17 40706300 40706617 -48797936 - AluSg SINE Alu 0 316 1 2037 125 87 12 chr17 40706637 40706972 -48797581 + MER46B DNA MER2_type 2 236 0 183 80 0 0 chr17 40708380 40708405 -48796148 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 428 248 51 22 chr17 40708623 40708760 -48795793 - MIR SINE MIR -54 208 68 231 337 79 0 chr17 40708790 40708891 -48795662 - MIR SINE MIR -48 214 106 1662 185 20 0 chr17 40709000 40709298 -48795255 + AluJo SINE Alu 1 304 -8 360 0 0 0 chr17 40709739 40709779 -48794774 + (CA)n Simple_repeat Simple_repeat 2 41 0 279 203 0 0 chr17 40710138 40710197 -48794356 + (TG)n Simple_repeat Simple_repeat 1 59 0 482 322 78 24 chr17 40710197 40710402 -48794151 - MIR SINE MIR -30 232 17 465 237 69 40 chr17 40710432 40710605 -48793948 - MER5A DNA MER1_type -5 184 7 213 327 25 66 chr17 40710785 40710912 -48793641 + MIR SINE MIR 45 166 -62 571 289 129 0 chr17 40711585 40711786 -48792767 + MIR SINE MIR 36 262 0 2037 133 0 10 chr17 40711917 40712225 -48792328 - AluJb SINE Alu -7 305 1 765 124 31 23 chr17 40712356 40712485 -48792068 - FLAM_C SINE Alu -1 142 13 1911 92 38 20 chr17 40712509 40712802 -48791751 - AluSx SINE Alu -13 299 2 332 253 228 6 chr17 40713457 40713615 -48790938 - MIR3 SINE MIR -11 197 5 347 248 24 2 chr17 40713903 40714017 -48790536 - MIR SINE MIR -62 146 38 183 288 14 41 chr17 40714738 40714811 -48789742 - L3b LINE CR1 -163 1420 1350 483 299 13 57 chr17 40715157 40715423 -48789130 + MIR SINE MIR 5 262 0 259 248 25 83 chr17 40716791 40716912 -48787641 + MER112 DNA MER1_type 3 116 -144 1993 88 70 18 chr17 40716933 40717217 -48787336 - AluSx SINE Alu -13 299 1 1611 159 7 66 chr17 40717290 40717579 -48786974 + AluJo SINE Alu 23 294 -18 2366 84 0 0 chr17 40717580 40717877 -48786676 + AluSc SINE Alu 1 297 -12 514 316 6 18 chr17 40718695 40718866 -48785687 + MER5A DNA MER1_type 19 187 -2 2342 75 0 7 chr17 40718948 40719254 -48785299 - AluY SINE Alu -7 304 1 1773 168 3 0 chr17 40719256 40719548 -48785005 - AluJo SINE Alu -19 293 1 744 109 78 55 chr17 40719567 40719695 -48784858 - FLAM_C SINE Alu 0 133 3 2215 115 0 6 chr17 40719876 40720190 -48784363 - AluSx SINE Alu 0 312 1 302 250 42 0 chr17 40720441 40720513 -48784040 + MIR SINE MIR 109 183 -79 1276 180 35 100 chr17 40720564 40720875 -48783678 - AluJo SINE Alu -19 293 3 400 221 90 151 chr17 40721343 40721498 -48783055 - LTR37B LTR ERV1 0 468 305 2314 113 0 0 chr17 40721498 40721809 -48782744 + AluSx SINE Alu 1 311 -1 400 221 90 151 chr17 40721809 40722151 -48782402 - LTR37B LTR ERV1 -163 305 1 266 231 181 31 chr17 40722151 40722433 -48782120 - L1MC3 LINE L1 -267 5903 5665 2074 102 7 20 chr17 40722433 40722738 -48781815 + AluY SINE Alu 1 301 -10 266 231 181 31 chr17 40722738 40722933 -48781620 - L1MC3 LINE L1 -505 5665 5392 1848 143 3 13 chr17 40722966 40723267 -48781286 + AluJo SINE Alu 5 302 -10 244 281 266 31 chr17 40723290 40723433 -48781120 + MIR SINE MIR 2 110 -152 1830 149 7 17 chr17 40723433 40723761 -48780792 + AluSx SINE Alu 1 312 0 244 281 266 31 chr17 40723761 40723809 -48780744 + MIR SINE MIR 110 238 -24 226 261 148 0 chr17 40724491 40724579 -48779974 + MER94 DNA DNA 1 101 -33 252 217 87 0 chr17 40724682 40724751 -48779802 + MIR SINE MIR 79 153 -109 366 271 34 17 chr17 40725037 40725155 -48779398 - MIR3 SINE MIR -7 201 82 2254 96 0 3 chr17 40726513 40726815 -48777738 + AluSg SINE Alu 1 301 -9 302 0 0 26 chr17 40726910 40726949 -48777604 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 1923 150 7 0 chr17 40726949 40727235 -48777318 - AluSx SINE Alu -21 291 1 1504 209 49 61 chr17 40727400 40727745 -48776808 - MER58B DNA MER1_type 0 341 1 477 264 61 31 chr17 40727758 40727921 -48776632 - MER5A DNA MER1_type -5 184 17 2127 111 0 0 chr17 40727921 40728210 -48776343 - AluSx SINE Alu -23 289 1 193 317 168 19 chr17 40728337 40728498 -48776055 - L2 LINE L2 -94 3178 2994 298 309 143 12 chr17 40728541 40728702 -48775851 + MIR SINE MIR 46 227 -35 2047 111 0 26 chr17 40728975 40729281 -48775272 - AluSx SINE Alu -14 298 1 203 145 40 105 chr17 40729571 40729647 -48774906 + (TTAGGG)n Simple_repeat Simple_repeat 6 76 0 304 311 62 25 chr17 40730665 40730826 -48773727 + MIR SINE MIR 84 250 -12 2224 92 3 3 chr17 40730907 40731210 -48773343 + AluSx SINE Alu 1 303 -9 414 268 65 0 chr17 40731253 40731376 -48773177 - MIR SINE MIR -56 206 76 360 94 0 0 chr17 40731861 40731914 -48772639 + (CA)n Simple_repeat Simple_repeat 2 54 0 637 279 228 13 chr17 40733269 40733465 -48771088 - L2 LINE L2 -49 3264 3111 2005 102 17 24 chr17 40733465 40733760 -48770793 + AluSx SINE Alu 1 293 -19 2162 109 3 3 chr17 40733767 40734071 -48770482 + AluSq SINE Alu 1 304 -9 637 279 228 13 chr17 40734071 40734438 -48770115 - L2 LINE L2 -206 3107 2555 210 171 0 0 chr17 40734576 40734611 -48769942 + T-rich Low_complexity Low_complexity 1 35 0 1753 141 3 61 chr17 40734862 40735066 -48769487 - AluJo SINE Alu -4 308 129 1919 112 32 4 chr17 40735066 40735344 -48769209 + AluSx SINE Alu 14 299 -13 1753 141 3 61 chr17 40735344 40735466 -48769087 - AluJo SINE Alu -183 129 1 195 42 0 0 chr17 40738372 40738396 -48766157 + (GGCTG)n Simple_repeat Simple_repeat 3 26 0 186 103 0 0 chr17 40738743 40738772 -48765781 + (TG)n Simple_repeat Simple_repeat 1 29 0 232 145 16 32 chr17 40738989 40739051 -48765502 + (TG)n Simple_repeat Simple_repeat 2 62 0 207 0 0 0 chr17 40739069 40739092 -48765461 + (TG)n Simple_repeat Simple_repeat 2 24 0 229 305 171 2 chr17 40739667 40739820 -48764733 - MIR3 SINE MIR -69 139 2 1587 61 0 0 chr17 40740638 40740834 -48763719 + AluY SINE Alu 85 280 -31 414 0 0 0 chr17 40740837 40740883 -48763670 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 995 105 0 0 chr17 40741032 40741165 -48763388 + FLAM_C SINE Alu 1 133 0 259 297 14 14 chr17 40741324 40741398 -48763155 + MIR SINE MIR 2 75 -187 2187 98 3 0 chr17 40741417 40741703 -48762850 - AluSp SINE Alu -26 287 1 1124 133 0 11 chr17 40741709 40741890 -48762663 - AluSg/x SINE Alu 0 312 134 2148 86 38 0 chr17 40741890 40742180 -48762373 - AluSg1 SINE Alu -8 301 1 180 111 0 0 chr17 40743090 40743117 -48761436 + (A)n Simple_repeat Simple_repeat 1 27 0 375 23 0 0 chr17 40744283 40744327 -48760226 + (TG)n Simple_repeat Simple_repeat 2 45 0 2141 119 0 0 chr17 40744516 40744827 -48759726 + AluSx SINE Alu 1 311 -1 2152 113 3 0 chr17 40744948 40745258 -48759295 + AluSx SINE Alu 1 311 -1 735 190 0 7 chr17 40745352 40745494 -48759059 + FLAM_C SINE Alu 2 142 -1 2062 125 0 10 chr17 40746685 40746998 -48757555 - AluSq SINE Alu -3 310 1 183 170 0 0 chr17 40747145 40747192 -48757361 + T-rich Low_complexity Low_complexity 1 47 0 6688 57 3 80 chr17 40747193 40748458 -48756095 - SVA Other Other -723 1386 432 1947 108 4 7 chr17 40748665 40748967 -48755586 + AluSx SINE Alu 9 312 0 1822 127 3 56 chr17 40748971 40749295 -48755258 + AluSg SINE Alu 1 307 -3 1817 134 21 3 chr17 40749305 40749589 -48754964 + AluSx SINE Alu 1 289 -23 23 33 0 0 chr17 40749812 40749842 -48754711 + AT_rich Low_complexity Low_complexity 1 30 0 2161 68 3 55 chr17 40751066 40751375 -48753178 - AluSg SINE Alu -16 294 2 1981 131 0 7 chr17 40752117 40752414 -48752139 + AluSx SINE Alu 2 296 -16 884 160 7 0 chr17 40753363 40753536 -48751017 - FRAM SINE Alu 0 175 2 240 235 0 0 chr17 40753758 40753809 -48750744 + (TA)n Simple_repeat Simple_repeat 2 52 0 29 0 0 0 chr17 40754528 40754557 -48749996 + AT_rich Low_complexity Low_complexity 1 29 0 1744 109 0 0 chr17 40754557 40754795 -48749758 - AluSx SINE Alu -25 287 50 2279 78 0 3 chr17 40754849 40755155 -48749398 - AluY SINE Alu -6 305 1 430 274 17 20 chr17 40755247 40755394 -48749159 + MIR SINE MIR 31 175 -62 21 36 0 0 chr17 40755394 40755422 -48749131 + AT_rich Low_complexity Low_complexity 1 28 0 2205 100 3 0 chr17 40756199 40756510 -48748043 + AluSx SINE Alu 1 312 0 213 39 0 0 chr17 40756511 40756537 -48748016 + (TA)n Simple_repeat Simple_repeat 2 27 0 348 272 228 22 chr17 40756576 40756712 -48747841 - L2 LINE L2 0 3272 3109 2838 13 0 0 chr17 40756836 40757154 -48747399 - AluYb8 SINE Alu 0 318 1 245 326 45 103 chr17 40757270 40757512 -48747041 - L2 LINE L2 -15 3257 3030 * 470 349 35 42 chr17 40757511 40757795 -48746758 + L2 LINE L2 2643 2924 -390 1589 189 0 10 chr17 40757870 40758166 -48746387 - AluJo SINE Alu -19 293 1 1058 180 4 69 chr17 40758180 40758348 -48746205 - AluJo SINE Alu -20 292 143 2066 126 7 0 chr17 40758348 40758657 -48745896 - AluSx SINE Alu -1 311 1 1058 180 4 69 chr17 40758657 40758733 -48745820 - AluJo SINE Alu -169 143 64 222 139 0 47 chr17 40758747 40758790 -48745763 + L2 LINE L2 3269 3309 -4 338 250 0 57 chr17 40758793 40758881 -48745672 + L1MC4 LINE L1 6646 6728 -1314 1654 156 7 14 chr17 40758881 40759163 -48745390 - AluJb SINE Alu -32 280 1 463 153 118 118 chr17 40759181 40759351 -48745202 - L1MC5 LINE L1 -30 7931 7762 1979 110 7 4 chr17 40759500 40759807 -48744746 + AluSg SINE Alu 1 308 0 29 28 0 0 chr17 40760548 40760584 -48743969 + AT_rich Low_complexity Low_complexity 1 36 0 2004 96 36 0 chr17 40761097 40761377 -48743176 + AluSx SINE Alu 1 290 -22 393 22 0 0 chr17 40761379 40761425 -48743128 + (TG)n Simple_repeat Simple_repeat 1 46 0 618 216 0 0 chr17 40761432 40761543 -48743010 + AluJo/FLAM SINE Alu 2 112 -200 1258 95 0 22 chr17 40761543 40761608 -48742945 + AluSc SINE Alu 70 135 -174 2362 73 3 0 chr17 40761608 40761909 -48742644 + AluY SINE Alu 1 302 -9 1258 95 0 22 chr17 40761909 40762022 -48742531 + AluSc SINE Alu 135 244 -65 228 135 0 0 chr17 40762022 40762059 -48742494 + (TG)n Simple_repeat Simple_repeat 2 38 0 889 131 0 0 chr17 40762707 40762837 -48741716 + AluSq/x SINE Alu 4 133 -179 2311 71 0 0 chr17 40762842 40763137 -48741416 + AluY SINE Alu 1 295 -16 378 132 0 0 chr17 40763137 40763213 -48741340 + (TA)n Simple_repeat Simple_repeat 1 76 0 311 252 53 46 chr17 40763217 40763348 -48741205 - L1MCa LINE L1 -4362 2064 1933 * 351 318 0 14 chr17 40763252 40763399 -48741154 + L1MC4 LINE L1 6613 6703 -1339 318 243 0 14 chr17 40763354 40763424 -48741129 - L1MCa LINE L1 -4362 2064 1996 * 314 278 22 33 chr17 40763382 40763454 -48741099 + L1MC4 LINE L1 6613 6685 -1357 * 917 110 0 11 chr17 40763454 40763636 -48740917 + (TA)n Simple_repeat Simple_repeat 1 180 0 314 278 22 33 chr17 40763636 40763653 -48740900 + L1MC4 LINE L1 6685 6701 -1341 * 334 258 0 43 chr17 40763644 40763737 -48740816 + L1MC4 LINE L1 6613 6701 -1341 385 274 79 0 chr17 40763756 40763948 -48740605 + L1MC4 LINE L1 6550 6646 -1139 329 215 46 0 chr17 40763903 40763968 -48740585 - L1MCa LINE L1 -4363 2063 1996 * 346 284 43 23 chr17 40763958 40764099 -48740454 + L1MC4 LINE L1 6613 6703 -1339 * 363 190 0 66 chr17 40764091 40764188 -48740365 - L1MC4 LINE L1 -1337 6985 1996 314 284 23 23 chr17 40764159 40764247 -48740306 + L1MC4 LINE L1 6616 6703 -1339 * 355 298 35 0 chr17 40764218 40764334 -48740219 + L1MC4 LINE L1 6613 6703 -1339 386 120 27 93 chr17 40764250 40764325 -48740228 - L1MCa LINE L1 -4362 2064 1995 943 162 0 23 chr17 40764335 40764508 -48740045 + AluSg/x SINE Alu 135 303 -9 1430 143 83 30 chr17 40764529 40764794 -48739759 - AluJo SINE Alu -31 281 3 2236 95 0 7 chr17 40764815 40765120 -48739433 + AluY SINE Alu 1 303 -8 1831 148 5 56 chr17 40765140 40765395 -48739158 - L1MB8 LINE L1 0 6178 5948 2149 104 3 7 chr17 40765395 40765702 -48738851 - AluSx SINE Alu -6 306 1 1831 148 5 56 chr17 40765702 40765837 -48738716 - L1MB8 LINE L1 -230 5948 5808 1094 53 29 100 chr17 40765842 40765942 -48738611 - L1PA11 LINE L1 -21 6153 6068 1181 92 0 6 chr17 40765942 40766106 -48738447 - L1PA7 LINE L1 0 6154 5992 1094 53 29 100 chr17 40766106 40766175 -48738378 - L1PA11 LINE L1 -106 6068 5996 * 2029 152 25 52 chr17 40766174 40766322 -48738231 - L1MB8 LINE L1 -352 5832 5681 1849 154 0 13 chr17 40766322 40766665 -48737888 + AluJb SINE Alu 1 312 0 2029 152 25 52 chr17 40766665 40766918 -48737635 - L1MB8 LINE L1 -503 5681 5442 811 210 25 6 chr17 40766925 40767082 -48737471 - AluJ SINE Alu -15 297 138 520 102 0 23 chr17 40767093 40767181 -48737372 - L1MB8 LINE L1 0 6178 6093 2088 148 14 0 chr17 40767189 40767541 -48737012 - L1MB4 LINE L1 0 6180 5824 383 129 14 29 chr17 40767568 40767638 -48736915 - Alu SINE Alu 0 301 233 904 134 0 8 chr17 40767653 40767787 -48736766 - FLAM_C SINE Alu 0 133 1 1406 192 48 0 chr17 40768087 40768378 -48736175 - AluJo SINE Alu -7 305 1 1771 168 7 0 chr17 40768383 40768681 -48735872 - AluJb SINE Alu -12 300 1 1991 123 14 0 chr17 40768938 40769230 -48735323 + AluSq SINE Alu 3 298 -15 1822 146 13 0 chr17 40769232 40769533 -48735020 + AluY SINE Alu 1 305 -6 325 182 0 0 chr17 40769708 40769763 -48734790 - Alu SINE Alu -7 293 239 835 150 0 0 chr17 40770008 40770141 -48734412 - AluSq/x SINE Alu -180 133 1 2045 120 3 7 chr17 40770182 40770313 -48734240 + AluSx SINE Alu 1 131 -181 378 0 0 0 chr17 40770313 40770355 -48734198 + (CA)n Simple_repeat Simple_repeat 1 42 0 2045 120 3 7 chr17 40770355 40770523 -48734030 + AluSx SINE Alu 131 299 -13 2153 112 0 0 chr17 40770530 40770825 -48733728 + AluSx SINE Alu 1 295 -17 445 164 16 131 chr17 40771149 40771199 -48733354 + MIR SINE MIR 154 185 -77 2128 93 0 17 chr17 40771199 40771522 -48733031 + AluSx SINE Alu 2 319 0 445 164 16 131 chr17 40771522 40771592 -48732961 + MIR SINE MIR 185 261 -1 2259 84 0 3 chr17 40772293 40772590 -48731963 + AluY SINE Alu 1 296 -15 1309 130 20 0 chr17 40772632 40772832 -48731721 - AluSg/x SINE Alu -13 297 94 2310 78 0 0 chr17 40772881 40773174 -48731379 + AluSg SINE Alu 17 309 -1 1229 92 0 0 chr17 40773174 40773337 -48731216 + AluY SINE Alu 133 295 -16 2154 123 0 0 chr17 40773493 40773801 -48730752 + AluSq SINE Alu 1 308 -5 1272 146 75 37 chr17 40774880 40775022 -48729531 - AluJo SINE Alu -6 306 171 2164 95 10 0 chr17 40775022 40775316 -48729237 - AluSc SINE Alu -12 297 1 1272 146 75 37 chr17 40775316 40775441 -48729112 - AluJo SINE Alu -141 171 29 488 189 0 11 chr17 40776177 40776267 -48728286 - AluJo SINE Alu -99 213 125 2133 123 10 0 chr17 40776488 40776796 -48727757 + AluSx SINE Alu 1 311 -1 303 28 0 0 chr17 40776812 40776848 -48727705 + (TG)n Simple_repeat Simple_repeat 1 36 0 681 192 16 0 chr17 40776852 40776977 -48727576 - AluJ SINE Alu -29 283 157 1028 118 0 7 chr17 40777142 40777294 -48727259 - AluJ SINE Alu -161 151 1 702 192 8 0 chr17 40777340 40777465 -48727088 + FLAM_A SINE Alu 1 126 -7 2242 119 0 0 chr17 40777809 40778119 -48726434 - AluSx SINE Alu -2 310 1 180 111 0 0 chr17 40779326 40779353 -48725200 + (CAT)n Simple_repeat Simple_repeat 2 28 0 1925 109 36 0 chr17 40779521 40779841 -48724712 + AluSp SINE Alu 1 330 0 2129 111 3 0 chr17 40780367 40780664 -48723889 - AluSx SINE Alu -14 298 1 278 135 0 0 chr17 40780833 40780870 -48723683 + Alu SINE Alu 1 37 -262 1657 145 16 45 chr17 40780941 40781288 -48723265 - AluJo SINE Alu 0 312 8 1367 122 126 16 chr17 40781365 40781501 -48723052 + AluSg1 SINE Alu 1 121 -184 1641 120 0 0 chr17 40781501 40781735 -48722818 + AluSx SINE Alu 1 234 -78 1367 122 126 16 chr17 40781735 40781875 -48722678 + AluSg1 SINE Alu 121 305 0 1896 92 0 113 chr17 40782009 40782337 -48722216 - AluSx SINE Alu -11 291 1 2092 79 3 33 chr17 40782780 40783085 -48721468 + AluY SINE Alu 1 296 -15 395 270 107 46 chr17 40783156 40783352 -48721201 - L1ME4a LINE L1 -149 5972 5765 2087 88 0 3 chr17 40783391 40783688 -48720865 - AluSg SINE Alu -14 296 1 25 31 0 0 chr17 40783858 40783890 -48720663 + AT_rich Low_complexity Low_complexity 1 32 0 817 66 0 0 chr17 40785129 40785235 -48719318 + FLAM_C SINE Alu 6 111 -32 180 77 0 0 chr17 40785388 40785414 -48719139 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 602 316 56 28 chr17 40785417 40785740 -48718813 - L2 LINE L2 -15 3298 2967 446 187 0 0 chr17 40785905 40785980 -48718573 - AluS SINE Alu -237 76 2 1649 140 74 0 chr17 40785981 40786266 -48718287 - AluSx SINE Alu -6 306 1 2143 107 0 10 chr17 40786292 40786602 -48717951 - AluSx SINE Alu -5 307 1 835 239 161 53 chr17 40786716 40787071 -48717482 - L2 LINE L2 -526 2788 2396 789 236 28 11 chr17 40787094 40787109 -48717444 - AluJo/FRAM SINE Alu 0 312 299 2298 87 10 0 chr17 40787109 40787419 -48717134 - AluSp SINE Alu 0 313 1 789 236 28 11 chr17 40787419 40787581 -48716972 - AluJo/FRAM SINE Alu -13 299 132 572 250 214 67 chr17 40787612 40788000 -48716553 - L2 LINE L2 -958 2356 1912 332 162 54 153 chr17 40788523 40788592 -48715961 + MER69A DNA AcHobo 1 57 -2469 2249 95 0 0 chr17 40788592 40788888 -48715665 - AluSx SINE Alu -16 296 1 332 162 54 153 chr17 40788888 40788929 -48715624 + MER69A DNA AcHobo 57 100 -77 1579 166 29 0 chr17 40789245 40789523 -48715030 - AluJo SINE Alu -18 294 9 386 240 94 0 chr17 40789574 40789670 -48714883 + MER5A DNA MER1_type 8 112 -77 2036 103 3 0 chr17 40790158 40790468 -48714085 - AluSp SINE Alu 0 311 1 190 175 70 140 chr17 40790586 40790608 -48713945 - L3b LINE CR1 -113 1470 1448 2100 121 0 16 chr17 40790608 40790921 -48713632 + AluSx SINE Alu 1 308 -4 190 175 70 140 chr17 40790921 40790955 -48713598 - L3b LINE CR1 -135 1448 1418 1797 145 0 11 chr17 40790983 40791266 -48713287 - AluSx SINE Alu -32 280 1 1687 154 33 26 chr17 40791294 40791415 -48713138 + AluJo SINE Alu 1 120 -192 234 0 0 0 chr17 40791415 40791441 -48713112 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1687 154 33 26 chr17 40791441 40791624 -48712929 + AluJo SINE Alu 120 307 -5 236 200 50 33 chr17 40791711 40791771 -48712782 - L1ME4a LINE L1 -85 6036 5976 282 246 51 72 chr17 40791819 40791910 -48712643 - L1ME4a LINE L1 -299 5822 5733 2103 112 0 0 chr17 40791910 40792206 -48712347 - AluSx SINE Alu -6 306 11 282 246 51 72 chr17 40792206 40792252 -48712301 - L1ME4a LINE L1 -388 5733 5688 23 0 0 0 chr17 40792279 40792302 -48712251 + AT_rich Low_complexity Low_complexity 1 23 0 207 100 0 0 chr17 40792423 40792453 -48712100 + (CAT)n Simple_repeat Simple_repeat 2 31 0 1368 126 61 82 chr17 40792494 40792788 -48711765 - AluSx SINE Alu -24 288 1 2344 52 0 0 chr17 40792797 40793087 -48711466 - AluY SINE Alu -21 290 1 1292 125 90 39 chr17 40793090 40793191 -48711362 + L1MB3 LINE L1 5913 6007 -176 2085 117 3 3 chr17 40793191 40793490 -48711063 - AluSx SINE Alu -13 299 1 1292 125 90 39 chr17 40793490 40793644 -48710909 + L1MB3 LINE L1 6007 6181 -2 1858 90 83 42 chr17 40793653 40793942 -48710611 + AluSx SINE Alu 1 301 -11 207 173 0 39 chr17 40793977 40794029 -48710524 + A-rich Low_complexity Low_complexity 6 55 0 1814 141 0 10 chr17 40794041 40794332 -48710221 + AluSq SINE Alu 6 293 -20 892 144 0 13 chr17 40794336 40794489 -48710064 + FRAM SINE Alu 15 165 -11 794 111 0 26 chr17 40794501 40794618 -48709935 + AluJ SINE Alu 13 126 -186 390 272 0 45 chr17 40794629 40794763 -48709790 - L1MC4 LINE L1 -1339 6703 6614 380 303 0 0 chr17 40794766 40794855 -48709698 + L1MC4 LINE L1 6615 6703 -1339 189 0 0 0 chr17 40794856 40794877 -48709676 + (TG)n Simple_repeat Simple_repeat 2 22 0 315 152 0 0 chr17 40794877 40794923 -48709630 - L1MC4 LINE L1 -1339 6703 6658 1142 173 0 5 chr17 40794938 40795129 -48709424 + AluJ SINE Alu 111 300 -12 1382 153 77 35 chr17 40795362 40795735 -48708818 - MLT1J LTR MaLR -26 485 40 1876 141 13 0 chr17 40795735 40796034 -48708519 + AluSx SINE Alu 1 303 -9 1382 153 77 35 chr17 40796034 40796071 -48708482 - MLT1J LTR MaLR -471 40 6 2361 64 0 22 chr17 40796539 40796850 -48707703 - AluY SINE Alu -7 304 1 2255 101 3 0 chr17 40796880 40797187 -48707366 - AluSx SINE Alu -3 309 2 259 114 0 0 chr17 40797306 40797341 -48707212 - Alu SINE Alu -265 36 2 1385 126 105 4 chr17 40797352 40797591 -48706962 + AluJb SINE Alu 49 311 -1 277 258 16 0 chr17 40797745 40797807 -48706746 - MIR SINE MIR -57 151 89 292 274 45 62 chr17 40797943 40798122 -48706431 + L1ME4a LINE L1 5944 6119 -2 2140 108 0 10 chr17 40798395 40798702 -48705851 - AluSx SINE Alu -5 307 4 850 86 18 0 chr17 40798716 40798839 -48705714 + L1MC/D LINE L1 5468 5592 -586 384 168 0 15 chr17 40798850 40798924 -48705629 - AluJb SINE Alu -176 126 67 1008 146 6 0 chr17 40798933 40799091 -48705462 - FRAM SINE Alu -18 158 1 3549 88 45 18 chr17 40799092 40799606 -48704947 + L1MC1 LINE L1 5577 6104 -229 2082 102 0 3 chr17 40799607 40799922 -48704631 + AluSx SINE Alu 1 314 0 1268 79 6 6 chr17 40799922 40800099 -48704454 + AluSq SINE Alu 133 309 -4 23 0 0 0 chr17 40800101 40800124 -48704429 + AT_rich Low_complexity Low_complexity 1 23 0 308 289 56 0 chr17 40800576 40800666 -48703887 - MIR3 SINE MIR -23 185 91 2097 122 3 0 chr17 40800696 40801000 -48703553 + AluSx SINE Alu 1 305 -7 755 189 18 53 chr17 40801010 40801200 -48703353 + FAM SINE Alu 1 175 0 879 194 0 6 chr17 40801256 40801416 -48703137 - AluJb SINE Alu -18 294 136 2034 123 0 7 chr17 40801502 40801803 -48702750 - AluSx SINE Alu -9 303 5 1897 161 0 0 chr17 40802373 40802683 -48701870 - AluSx SINE Alu -2 310 1 1712 157 7 17 chr17 40803094 40803387 -48701166 + AluJb SINE Alu 1 290 -22 2087 113 10 0 chr17 40803721 40804014 -48700539 + AluSx SINE Alu 1 296 -16 1557 187 7 17 chr17 40804038 40804337 -48700216 + AluJo SINE Alu 1 296 -16 2043 107 0 46 chr17 40804338 40804664 -48699889 + AluSx SINE Alu 1 311 -1 3646 146 48 91 chr17 40804805 40804854 -48699699 - L1MB3 LINE L1 -3 6180 6130 2399 69 0 0 chr17 40804854 40805157 -48699396 - AluSg SINE Alu -7 303 1 3646 146 48 91 chr17 40805157 40805691 -48698862 - L1MB3 LINE L1 -53 6130 5575 2192 73 0 48 chr17 40805691 40806006 -48698547 - AluSq SINE Alu -13 300 1 3646 146 48 91 chr17 40806006 40806053 -48698500 - L1MB3 LINE L1 -608 5575 5528 2243 93 7 7 chr17 40806053 40806363 -48698190 - AluSq SINE Alu -3 310 1 3646 146 48 91 chr17 40806363 40806622 -48697931 - L1MB3 LINE L1 -655 5528 5259 1887 110 43 3 chr17 40806622 40806904 -48697649 - AluSq SINE Alu -20 293 1 2352 47 0 13 chr17 40806911 40807209 -48697344 - AluY SINE Alu -17 294 1 3646 146 48 91 chr17 40807209 40807424 -48697129 - L1MB3 LINE L1 -930 5253 5030 1876 152 0 3 chr17 40807424 40807720 -48696833 - AluJb SINE Alu -17 295 1 3646 146 48 91 chr17 40807720 40807904 -48696649 - L1MB3 LINE L1 -1153 5030 5009 2336 84 0 0 chr17 40807904 40808213 -48696340 - AluSg SINE Alu -1 309 1 3646 146 48 91 chr17 40808213 40808445 -48696108 - L1MB3 LINE L1 -1174 5009 4769 1535 133 155 47 chr17 40808649 40808941 -48695612 + MSTA LTR MaLR 60 392 -36 2298 93 3 0 chr17 40808941 40809251 -48695302 - AluSq SINE Alu -2 311 1 1535 133 155 47 chr17 40809251 40809280 -48695273 + MSTA LTR MaLR 392 416 -12 776 291 75 14 chr17 40809284 40809673 -48694880 - L1ME3A LINE L1 -311 5928 5522 2332 70 3 0 chr17 40809673 40809974 -48694579 - AluSx SINE Alu -10 302 1 776 291 75 14 chr17 40809974 40810010 -48694543 - L1ME3A LINE L1 -717 5522 5490 1448 179 19 4 chr17 40810021 40810283 -48694270 - AluJo SINE Alu -46 266 1 299 218 91 36 chr17 40810289 40810454 -48694099 - L1ME3A LINE L1 -733 5500 5327 1235 172 0 20 chr17 40810513 40810571 -48693982 - MER20 DNA MER1_type -1 218 160 336 94 0 0 chr17 40810571 40810624 -48693929 + (TG)n Simple_repeat Simple_repeat 2 54 0 1235 172 0 20 chr17 40810624 40810769 -48693784 - MER20 DNA MER1_type -59 160 19 1945 125 10 22 chr17 40810809 40811120 -48693433 + AluSx SINE Alu 5 311 -1 1310 274 78 14 chr17 40811124 40811791 -48692762 - L1ME3A LINE L1 -1053 5162 4453 2211 87 0 7 chr17 40811804 40812102 -48692451 - AluSx SINE Alu -16 296 1 788 168 0 0 chr17 40812118 40812243 -48692310 - FLAM_C SINE Alu -7 126 2 507 327 50 79 chr17 40812331 40812372 -48692181 - L1ME3A LINE L1 -3980 2416 2375 1470 205 7 13 chr17 40812372 40812674 -48691879 - AluJo SINE Alu -11 301 2 507 327 50 79 chr17 40812674 40812752 -48691801 - L1ME3A LINE L1 -4021 2375 2296 2076 96 0 0 chr17 40812752 40813023 -48691530 - AluSx SINE Alu -30 282 12 507 327 50 79 chr17 40813023 40813058 -48691495 - L1ME3A LINE L1 -4100 2296 2262 360 0 0 0 chr17 40813058 40813098 -48691455 + (TG)n Simple_repeat Simple_repeat 2 41 0 507 327 50 79 chr17 40813098 40813458 -48691095 - L1ME3A LINE L1 -4134 2262 1915 479 261 86 60 chr17 40814181 40814362 -48690191 - L1ME LINE L1 -873 1568 1393 2177 109 10 6 chr17 40814362 40814674 -48689879 - AluSq SINE Alu 0 313 1 479 261 86 60 chr17 40814674 40814868 -48689685 - L1ME LINE L1 -1048 1393 1165 180 77 0 0 chr17 40814877 40814903 -48689650 + (TCCCC)n Simple_repeat Simple_repeat 1 26 0 1825 137 11 0 chr17 40814903 40815188 -48689365 - AluJo SINE Alu -11 301 14 1082 266 99 70 chr17 40815229 40815479 -48689074 - L1ME LINE L1 -5051 1019 778 2204 103 0 7 chr17 40815479 40815789 -48688764 - AluSc SINE Alu -1 308 1 1082 266 99 70 chr17 40815789 40816062 -48688491 - L1ME LINE L1 -5292 778 514 1918 119 0 51 chr17 40816062 40816396 -48688157 - AluSq SINE Alu 0 313 1 1082 266 99 70 chr17 40816396 40816505 -48688048 - L1ME LINE L1 -5556 514 410 2404 81 0 0 chr17 40816505 40816813 -48687740 - AluY SINE Alu -3 308 1 1082 266 99 70 chr17 40816813 40817217 -48687336 - L1ME LINE L1 -5660 410 1 1054 122 10 51 chr17 40818033 40818230 -48686323 - AluSg/x SINE Alu -2 308 120 2116 107 13 7 chr17 40818232 40818541 -48686012 - AluSx SINE Alu -1 311 1 1948 144 13 0 chr17 40818647 40818952 -48685601 - AluJb SINE Alu -3 309 1 804 280 143 42 chr17 40819000 40819553 -48685000 + L2 LINE L2 2145 2753 -561 343 277 90 112 chr17 40819593 40820005 -48684548 + L2 LINE L2 2843 3245 -27 218 411 0 0 chr17 40820002 40820075 -48684478 + MIR SINE MIR 52 124 -138 * 564 300 162 48 chr17 40820171 40820943 -48683610 + L2 LINE L2 1497 2396 -918 2171 116 0 6 chr17 40820943 40821254 -48683299 + AluSx SINE Alu 1 309 -3 564 300 162 48 chr17 40821254 40821417 -48683136 + L2 LINE L2 2396 2539 -775 271 253 40 0 chr17 40821524 40821599 -48682954 + CT-rich Low_complexity Low_complexity 4 81 0 360 47 0 0 chr17 40821599 40821642 -48682911 - L2 LINE L2 -9 3304 3262 2129 99 10 0 chr17 40822120 40822414 -48682139 + AluSx SINE Alu 2 298 -14 2045 99 0 23 chr17 40822973 40823275 -48681278 - AluSx SINE Alu -17 295 1 1678 152 20 26 chr17 40823297 40823599 -48680954 - AluJb SINE Alu -12 300 1 243 79 0 0 chr17 40823800 40823838 -48680715 + (CA)n Simple_repeat Simple_repeat 2 39 0 423 0 0 0 chr17 40824071 40824118 -48680435 + (CA)n Simple_repeat Simple_repeat 1 47 0 429 141 0 0 chr17 40824187 40824258 -48680295 + (TTCCC)n Simple_repeat Simple_repeat 1 71 0 1964 79 45 0 chr17 40824258 40824523 -48680030 - AluSp SINE Alu -22 291 15 314 222 28 0 chr17 40824823 40824895 -48679658 + L1MC5 LINE L1 7702 7775 -186 1017 78 0 42 chr17 40824906 40825048 -48679505 + AluSq/x SINE Alu 1 136 -176 2104 87 45 0 chr17 40825048 40825336 -48679217 + AluSq SINE Alu 1 301 -12 284 252 50 25 chr17 40825338 40825457 -48679096 + L1MC5 LINE L1 7789 7910 -51 445 304 101 42 chr17 40825483 40825700 -48678853 + MIR SINE MIR 18 247 -15 2007 219 13 5 chr17 40825752 40826144 -48678409 + MSTD LTR MaLR 2 396 0 1419 178 17 34 chr17 40826274 40826572 -48677981 - AluJo SINE Alu -19 293 1 772 246 99 16 chr17 40827411 40827663 -48676890 + L3 LINE CR1 1278 1550 -27 322 292 0 31 chr17 40827687 40827783 -48676770 + MIR SINE MIR 23 115 -93 24 0 0 0 chr17 40827825 40827849 -48676704 + AT_rich Low_complexity Low_complexity 1 24 0 2266 81 0 3 chr17 40827849 40828144 -48676409 + AluY SINE Alu 1 294 -17 1596 98 29 36 chr17 40828236 40828392 -48676161 - L1MA2 LINE L1 -3 6301 6146 1952 164 13 0 chr17 40828392 40828697 -48675856 - AluJb SINE Alu -3 309 1 1596 98 29 36 chr17 40828697 40828817 -48675736 - L1MA2 LINE L1 -158 6146 6027 1827 207 110 78 chr17 40828817 40829536 -48675017 + LTR1B LTR ERV1 1 742 -84 956 77 32 26 chr17 40829665 40829821 -48674732 - L1MA3 LINE L1 -276 6029 5873 258 298 165 13 chr17 40829827 40829857 -48674696 + MIR SINE MIR 74 98 -164 2281 157 0 3 chr17 40829857 40830195 -48674358 - MER1B DNA MER1_type 0 337 1 258 298 165 13 chr17 40830195 40830322 -48674231 + MIR SINE MIR 98 255 -7 2308 116 0 3 chr17 40830323 40830626 -48673927 + AluSx SINE Alu 1 302 -10 1252 199 60 38 chr17 40830649 40830746 -48673807 - MER33 DNA MER1_type -2261 324 231 2225 114 0 3 chr17 40830746 40831043 -48673510 - AluSx SINE Alu -12 300 5 1252 199 60 38 chr17 40831043 40831262 -48673291 - MER33 DNA MER1_type -2354 231 1 798 142 191 11 chr17 40831321 40831360 -48673193 + MER21A LTR ERV1 1 32 -899 4399 116 14 41 chr17 40831360 40832067 -48672486 + LTR8 LTR ERV1 1 688 -3 798 142 191 11 chr17 40832067 40832210 -48672343 + MER21A LTR ERV1 32 216 -715 776 187 6 60 chr17 40832227 40832263 -48672290 + MER21B LTR ERV1 279 315 -548 1899 169 0 3 chr17 40832263 40832564 -48671989 + AluJb SINE Alu 1 300 -12 776 187 6 60 chr17 40832564 40832693 -48671860 + MER21B LTR ERV1 315 435 -428 893 251 124 60 chr17 40832895 40833057 -48671496 - LTR1B LTR ERV1 -213 613 463 2349 99 0 0 chr17 40833057 40833351 -48671202 + AluSx SINE Alu 1 294 -18 893 251 124 60 chr17 40833351 40833734 -48670819 - LTR1B LTR ERV1 -363 463 33 * 2578 114 28 2 chr17 40833728 40834123 -48670430 + MER21A LTR ERV1 517 921 -10 2322 108 3 0 chr17 40834225 40834532 -48670021 - AluSq SINE Alu 0 313 6 198 270 48 16 chr17 40834729 40834792 -48669761 + MIR SINE MIR 198 262 0 209 228 35 18 chr17 40834862 40834919 -48669634 + MIR SINE MIR 88 145 -63 457 84 28 0 chr17 40834955 40835026 -48669527 - MADE1 DNA Mariner -1 79 7 2320 101 0 9 chr17 40835042 40835358 -48669195 - AluSq SINE Alu 0 313 1 4894 106 47 0 chr17 40836261 40837005 -48667548 + Tigger1 DNA MER2_type 735 1513 -905 2308 96 0 3 chr17 40837010 40837303 -48667250 + AluSc SINE Alu 5 296 -13 3919 108 16 23 chr17 40837303 40837480 -48667073 + Tigger1 DNA MER2_type 1629 1806 -612 2465 86 0 0 chr17 40837480 40837783 -48666770 - AluSq SINE Alu -10 303 1 3919 108 16 23 chr17 40837783 40838224 -48666329 + Tigger1 DNA MER2_type 1806 2243 -175 1795 161 40 6 chr17 40838224 40838546 -48666007 + LTR28 LTR ERV1 1 333 -687 2373 101 3 0 chr17 40838686 40838983 -48665570 + AluSg SINE Alu 1 298 -12 219 36 0 0 chr17 40839347 40839375 -48665178 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 2414 57 10 24 chr17 40839619 40839915 -48664638 - AluY SINE Alu -19 292 1 1130 116 0 0 chr17 40840062 40840217 -48664336 + AluSc SINE Alu 150 304 -5 932 110 110 0 chr17 40840917 40841053 -48663500 - AluSg SINE Alu -159 151 1 2295 104 0 3 chr17 40841086 40841393 -48663160 - AluSq SINE Alu -1 312 7 2166 128 0 0 chr17 40842091 40842387 -48662166 - AluSx SINE Alu -16 296 1 432 311 59 70 chr17 40842633 40843382 -48661171 + L1MEc LINE L1 237 2410 -937 418 302 89 22 chr17 40843387 40843612 -48660941 + L1MEc LINE L1 2390 2629 -3517 2066 139 7 0 chr17 40843760 40844047 -48660506 + AluSx SINE Alu 7 295 -17 242 302 160 0 chr17 40844047 40844153 -48660400 + MER5A DNA MER1_type 66 188 -1 1715 193 13 0 chr17 40844462 40844762 -48659791 - AluJo SINE Alu -8 304 1 4070 93 22 5 chr17 40845212 40845861 -48658692 + L1PB1 LINE L1 5223 5881 -270 24 0 0 0 chr17 40847324 40847348 -48657205 + AT_rich Low_complexity Low_complexity 1 24 0 783 149 0 0 chr17 40847350 40847464 -48657089 - FRAM SINE Alu -62 114 1 580 225 8 0 chr17 40848458 40848587 -48655966 + Zaphod DNA AcHobo 3877 4006 -25 307 111 0 0 chr17 40849220 40849265 -48655288 - MLT1K LTR MaLR -6 582 538 1409 211 28 7 chr17 40850212 40850497 -48654056 - AluSq SINE Alu -22 291 1 1398 189 7 60 chr17 40850528 40850830 -48653723 - AluSg SINE Alu -24 286 1 216 0 0 0 chr17 40850839 40850863 -48653690 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 2753 181 61 93 chr17 40850872 40851706 -48652847 + SVA Other Other 62 868 -518 1774 122 88 27 chr17 40851917 40852211 -48652342 - AluJb SINE Alu 0 312 1 265 57 0 0 chr17 40852492 40852527 -48652026 + Alu SINE Alu 255 289 -13 2239 104 10 3 chr17 40853122 40853419 -48651134 - AluSx SINE Alu -13 299 1 894 226 94 13 chr17 40853602 40853837 -48650716 - MER87 LTR ERV1 0 541 288 1010 266 12 4 chr17 40854644 40854888 -48649665 + MIR SINE MIR 16 261 -1 267 219 105 48 chr17 40854918 40855006 -48649547 + L2 LINE L2 3138 3234 -38 2404 92 0 0 chr17 40855006 40855309 -48649244 + AluSx SINE Alu 1 303 -9 267 219 105 48 chr17 40855309 40855325 -48649228 + L2 LINE L2 3234 3248 -24 239 266 80 35 chr17 40855455 40855568 -48648985 - MIR3 SINE MIR -52 156 39 1451 176 44 44 chr17 40856318 40856457 -48648096 - AluJb SINE Alu -40 272 131 2132 126 13 10 chr17 40856457 40856759 -48647794 - AluSx SINE Alu -9 303 1 1451 176 44 44 chr17 40856759 40856891 -48647662 - AluJb SINE Alu -180 132 1 310 185 0 0 chr17 40856893 40856947 -48647606 + MER3 DNA MER1_type 155 208 -1 279 221 29 114 chr17 40856975 40857069 -48647484 - L1MC4a LINE L1 -1893 5915 5835 2361 105 0 0 chr17 40857069 40857365 -48647188 - AluSp SINE Alu -17 296 1 279 221 29 114 chr17 40857365 40857410 -48647143 - L1MC4a LINE L1 -1973 5835 5788 1700 170 14 24 chr17 40857875 40858169 -48646384 + AluJo SINE Alu 1 291 -21 446 0 19 0 chr17 40858303 40858357 -48646196 + (TAAAA)n Simple_repeat Simple_repeat 2 56 0 354 228 24 24 chr17 40858386 40858509 -48646044 - L1ME3A LINE L1 -208 5962 5840 446 146 109 0 chr17 40858535 40858645 -48645908 + Charlie5 DNA MER1_type 2 123 -2489 719 138 76 131 chr17 40858647 40858753 -48645800 + Charlie5 DNA MER1_type 2234 2344 -241 1863 164 3 3 chr17 40858753 40859046 -48645507 - AluJb SINE Alu -9 303 11 719 138 76 131 chr17 40859046 40859439 -48645114 + Charlie5 DNA MER1_type 2344 2579 -6 447 268 23 42 chr17 40859526 40859723 -48644830 - L1ME3A LINE L1 -348 5836 5645 2191 105 10 7 chr17 40860393 40860698 -48643855 + AluSx SINE Alu 3 308 -4 381 324 118 49 chr17 40860755 40860959 -48643594 + L1MC/D LINE L1 5281 5498 -623 24 0 0 0 chr17 40861759 40861783 -48642770 + AT_rich Low_complexity Low_complexity 1 24 0 1690 185 99 143 chr17 40862095 40862410 -48642143 + LTR8 LTR ERV1 1 329 -362 1884 121 38 0 chr17 40862410 40862675 -48641878 + AluSx SINE Alu 1 275 -37 221 0 35 0 chr17 40862680 40862709 -48641844 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1690 185 99 143 chr17 40862709 40862736 -48641817 + LTR8 LTR ERV1 333 360 -331 4708 142 16 46 chr17 40862736 40863555 -48640998 - LTR25 LTR ERV1 0 794 1 1690 185 99 143 chr17 40863555 40863578 -48640975 + LTR8 LTR ERV1 360 382 -309 2515 53 7 0 chr17 40863578 40863877 -48640676 + AluY SINE Alu 1 301 -10 1690 185 99 143 chr17 40863877 40864264 -48640289 + LTR8 LTR ERV1 382 691 0 2306 72 10 3 chr17 40865143 40865448 -48639105 - AluSq SINE Alu -6 307 1 433 137 53 53 chr17 40866135 40866230 -48638323 - MIR3 SINE MIR -52 156 62 1495 196 77 0 chr17 40866612 40866897 -48637656 - AluJo SINE Alu -5 307 1 578 178 68 51 chr17 40867802 40867920 -48636633 + FLAM_A SINE Alu 2 121 -12 2124 151 3 0 chr17 40868518 40868829 -48635724 - AluJb SINE Alu 0 312 1 646 266 102 13 chr17 40869021 40869257 -48635296 + MIR SINE MIR 3 255 -7 316 194 0 14 chr17 40869419 40869491 -48635062 + AluS SINE Alu 232 302 0 2015 144 7 7 chr17 40869620 40869919 -48634634 + AluJo SINE Alu 1 299 -13 2187 101 4 0 chr17 40870112 40870426 -48634127 - AluSg SINE Alu 0 315 1 1059 118 0 0 chr17 40870426 40870561 -48633992 - AluSq/x SINE Alu -178 135 1 253 280 213 47 chr17 40871076 40871226 -48633327 + MIR SINE MIR 8 182 -80 276 343 21 43 chr17 40871683 40871823 -48632730 + MIR SINE MIR 14 150 -112 1144 144 0 0 chr17 40873524 40873684 -48630869 + FRAM SINE Alu 1 160 -16 401 244 126 16 chr17 40874455 40874582 -48629971 - MER5A DNA MER1_type -3 186 46 2454 52 0 39 chr17 40874727 40875033 -48629520 + AluY SINE Alu 1 294 -17 1937 160 3 0 chr17 40875055 40875349 -48629204 + AluJb SINE Alu 3 297 -15 184 160 0 80 chr17 40875406 40875456 -48629097 - MIR SINE MIR -58 150 105 1843 116 55 41 chr17 40875677 40875969 -48628584 + AluSq SINE Alu 1 296 -17 412 286 99 6 chr17 40876444 40876615 -48627938 - MER5A DNA MER1_type -2 187 1 197 322 17 0 chr17 40877015 40877074 -48627479 - L3 LINE CR1 -1 1576 1517 712 176 0 17 chr17 40877102 40877221 -48627332 - FRAM SINE Alu -20 156 40 297 225 0 0 chr17 40877226 40877315 -48627238 + CT-rich Low_complexity Low_complexity 4 92 0 402 271 66 42 chr17 40877339 40877505 -48627048 - L2 LINE L2 -41 3272 3103 962 212 32 41 chr17 40877570 40877873 -48626680 + L1MA9 LINE L1 6011 6293 -4 2402 84 0 3 chr17 40878626 40878923 -48625630 - AluY SINE Alu -15 296 1 445 164 16 131 chr17 40879624 40879694 -48624859 - MIR SINE MIR -1 261 208 2127 93 0 17 chr17 40879694 40880017 -48624536 - AluSx SINE Alu 0 319 2 445 164 16 131 chr17 40880017 40880067 -48624486 - MIR SINE MIR -54 208 154 2153 112 0 0 chr17 40880391 40880686 -48623867 - AluSx SINE Alu -17 295 1 2045 120 3 7 chr17 40880693 40880861 -48623692 - AluSx SINE Alu -13 299 131 378 0 0 0 chr17 40880861 40880903 -48623650 + (TG)n Simple_repeat Simple_repeat 1 42 0 2045 120 3 7 chr17 40880903 40881034 -48623519 - AluSx SINE Alu -181 131 1 835 150 0 0 chr17 40881075 40881208 -48623345 + AluSq/x SINE Alu 1 133 -180 325 182 0 0 chr17 40881453 40881508 -48623045 + Alu SINE Alu 240 294 -7 1822 146 13 0 chr17 40881683 40881984 -48622569 - AluY SINE Alu -6 305 1 2120 95 14 0 chr17 40881986 40882280 -48622273 - AluSq SINE Alu -15 298 1 1448 179 19 4 chr17 40882327 40882589 -48621964 - AluJo SINE Alu -46 266 1 299 218 91 36 chr17 40882595 40882760 -48621793 - L1ME LINE L1 -731 5431 5258 1235 172 0 20 chr17 40882819 40882877 -48621676 - MER20 DNA MER1_type -1 218 160 336 94 0 0 chr17 40882877 40882930 -48621623 + (TG)n Simple_repeat Simple_repeat 2 54 0 1235 172 0 20 chr17 40882930 40883075 -48621478 - MER20 DNA MER1_type -59 160 19 1945 125 10 22 chr17 40883115 40883426 -48621127 + AluSx SINE Alu 5 311 -1 1327 273 78 14 chr17 40883430 40884097 -48620456 - L1ME LINE L1 -1053 5093 4384 2198 91 0 7 chr17 40884110 40884408 -48620145 - AluSx SINE Alu -16 296 1 788 168 0 0 chr17 40884424 40884549 -48620004 - FLAM_C SINE Alu -7 126 2 1470 205 7 13 chr17 40884678 40884980 -48619573 - AluJo SINE Alu -11 301 2 182 150 25 0 chr17 40885017 40885057 -48619496 + (TA)n Simple_repeat Simple_repeat 2 42 0 265 323 47 19 chr17 40885186 40885314 -48619239 - MIR SINE MIR -67 141 6 313 132 0 38 chr17 40885331 40885384 -48619169 + AluJo SINE Alu 86 136 -166 814 165 0 0 chr17 40885384 40885517 -48619036 + AluSq/x SINE Alu 1 133 -180 382 263 178 0 chr17 40885536 40885654 -48618899 + MIR SINE MIR 113 251 -11 1837 167 0 0 chr17 40885925 40886230 -48618323 + AluJo SINE Alu 3 307 -5 1957 130 0 19 chr17 40886401 40886536 -48618017 + AluSx SINE Alu 1 137 -175 2115 95 3 0 chr17 40886536 40886820 -48617733 + AluSp SINE Alu 1 285 -28 243 61 0 0 chr17 40886820 40886853 -48617700 + (CA)n Simple_repeat Simple_repeat 2 34 0 1957 130 0 19 chr17 40886853 40887023 -48617530 + AluSx SINE Alu 135 301 -11 292 247 41 72 chr17 40887676 40887773 -48616780 + MIR3 SINE MIR 13 106 -102 222 260 60 0 chr17 40887774 40887824 -48616729 + L2 LINE L2 3220 3272 0 247 170 31 0 chr17 40887832 40887892 -48616661 + MIR SINE MIR 107 170 -64 386 213 187 65 chr17 40887922 40888077 -48616476 - MER5A DNA MER1_type -1 188 15 213 65 0 0 chr17 40888077 40888108 -48616445 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 734 176 8 0 chr17 40888108 40888227 -48616326 - FLAM_C SINE Alu -22 121 2 1244 157 57 90 chr17 40888257 40888556 -48615997 - AluJo SINE Alu -23 289 1 4629 136 18 24 chr17 40888696 40889268 -48615285 + LTR39 LTR ERV1 48 615 -168 2147 110 7 13 chr17 40889268 40889577 -48614976 + AluSx SINE Alu 1 307 -5 4629 136 18 24 chr17 40889577 40889745 -48614808 + LTR39 LTR ERV1 615 783 0 435 271 52 0 chr17 40889745 40889839 -48614714 + MER81 DNA DNA 16 114 0 394 273 56 14 chr17 40889925 40890068 -48614485 - MIR3 SINE MIR -36 172 24 1972 167 68 74 chr17 40890343 40890396 -48614157 - L1M3 LINE L1 -740 5440 5388 1887 110 43 3 chr17 40890396 40890678 -48613875 - AluSq SINE Alu -20 293 1 2352 47 0 13 chr17 40890685 40890983 -48613570 - AluY SINE Alu -17 294 1 1972 167 68 74 chr17 40890983 40891198 -48613355 - L1M3 LINE L1 -798 5382 5167 1876 152 0 3 chr17 40891198 40891494 -48613059 - AluJb SINE Alu -17 295 1 1972 167 68 74 chr17 40891494 40891678 -48612875 - L1M3 LINE L1 -1013 5167 4983 2336 84 0 0 chr17 40891678 40891987 -48612566 - AluSg SINE Alu -1 309 1 1972 167 68 74 chr17 40891987 40892219 -48612334 - L1M3 LINE L1 -1197 4983 4769 1535 133 155 47 chr17 40892423 40892715 -48611838 + MSTA LTR MaLR 60 392 -36 2286 97 3 0 chr17 40892715 40893025 -48611528 - AluSq SINE Alu -2 311 1 1535 133 155 47 chr17 40893025 40893054 -48611499 + MSTA LTR MaLR 392 416 -12 776 289 75 12 chr17 40893058 40893447 -48611106 - L1ME3A LINE L1 -311 5859 5449 2258 66 0 3 chr17 40893447 40893748 -48610805 - AluSg SINE Alu -10 300 1 25 31 0 0 chr17 40893918 40893950 -48610603 + AT_rich Low_complexity Low_complexity 1 32 0 817 66 0 0 chr17 40895189 40895295 -48609258 + FLAM_C SINE Alu 6 111 -32 180 77 0 0 chr17 40895448 40895474 -48609079 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 602 316 56 28 chr17 40895477 40895800 -48608753 - L2 LINE L2 -15 3298 2967 446 187 0 0 chr17 40895965 40896040 -48608513 - AluS SINE Alu -236 76 2 1624 147 74 0 chr17 40896041 40896326 -48608227 - AluSx SINE Alu -6 306 1 2143 107 0 10 chr17 40896352 40896662 -48607891 - AluSx SINE Alu -5 307 1 835 239 161 53 chr17 40896776 40897131 -48607422 - L2 LINE L2 -526 2788 2396 789 236 28 11 chr17 40897154 40897169 -48607384 - AluJo/FRAM SINE Alu 0 312 299 2298 87 10 0 chr17 40897169 40897479 -48607074 - AluSp SINE Alu 0 313 1 789 236 28 11 chr17 40897479 40897641 -48606912 - AluJo/FRAM SINE Alu -13 299 132 583 250 214 67 chr17 40897672 40898060 -48606493 - L2 LINE L2 -958 2356 1912 332 162 54 153 chr17 40898583 40898652 -48605901 + MER69A DNA AcHobo 1 57 -2469 2249 95 0 0 chr17 40898652 40898948 -48605605 - AluSx SINE Alu -16 296 1 332 162 54 153 chr17 40898948 40898989 -48605564 + MER69A DNA AcHobo 57 100 -77 1579 166 29 0 chr17 40899305 40899583 -48604970 - AluJo SINE Alu -18 294 9 386 240 94 0 chr17 40899634 40899730 -48604823 + MER5A DNA MER1_type 8 112 -77 2295 75 0 3 chr17 40900197 40900492 -48604061 - AluSp SINE Alu -19 294 1 2087 81 34 3 chr17 40901783 40902124 -48602429 + AluY SINE Alu 1 350 0 956 233 43 0 chr17 40906665 40906875 -48597678 + MIR SINE MIR 13 231 -31 1283 191 4 0 chr17 40908446 40908676 -48595877 - AluJo SINE Alu -81 231 1 1971 133 0 0 chr17 40908696 40909042 -48595511 - AluSq SINE Alu 0 346 1 356 197 138 110 chr17 40909052 40909222 -48595331 + L1ME3A LINE L1 5931 6110 -60 793 196 0 0 chr17 40909222 40909355 -48595198 + FLAM_C SINE Alu 1 133 0 356 197 138 110 chr17 40909355 40909402 -48595151 + L1ME3A LINE L1 6110 6154 -16 366 61 0 0 chr17 40909616 40909665 -48594888 + (TG)n Simple_repeat Simple_repeat 1 49 0 198 0 0 0 chr17 40909665 40909687 -48594866 + (TGG)n Simple_repeat Simple_repeat 3 24 0 295 247 0 62 chr17 40909977 40910058 -48594495 + MIR3 SINE MIR 130 205 -3 803 254 16 5 chr17 40910243 40910432 -48594121 + MER58C DNA MER1_type 15 205 -10 2196 76 34 0 chr17 40910435 40910726 -48593827 + AluSx SINE Alu 3 303 -9 26 74 0 0 chr17 40910840 40910894 -48593659 + AT_rich Low_complexity Low_complexity 1 54 0 577 242 23 0 chr17 40911912 40912040 -48592513 - MER5A DNA MER1_type -22 167 37 1197 166 38 0 chr17 40913137 40913348 -48591205 + MER20 DNA MER1_type 1 219 0 214 282 17 17 chr17 40913765 40913842 -48590711 - MIR SINE MIR -34 174 97 337 212 164 48 chr17 40914206 40914352 -48590201 + MER69A DNA AcHobo 5 167 -10 658 194 24 8 chr17 40914489 40914613 -48589940 - LTR39 LTR ERV1 0 783 658 514 73 0 0 chr17 40914899 40914967 -48589586 + AluSg SINE Alu 2 69 -242 327 208 39 13 chr17 40915161 40915238 -48589315 + MER91A DNA MER1_type 26 104 -92 405 299 24 8 chr17 40916587 40916714 -48587839 - MLT1H LTR MaLR -326 223 95 2180 180 33 67 chr17 40917142 40917653 -48586900 + LTR10E LTR ERV1 115 608 -25 2235 102 13 0 chr17 40917680 40917983 -48586570 + AluSx SINE Alu 1 307 -5 1452 130 0 0 chr17 40918304 40918520 -48586033 + AluSg SINE Alu 65 280 -30 734 0 12 0 chr17 40918520 40918606 -48585947 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 301 283 20 20 chr17 40969769 40969868 -48534685 - MIR SINE MIR -5 257 159 662 331 68 18 chr17 40969966 40970292 -48534261 + L1MC4a LINE L1 5541 5882 -1926 345 24 0 0 chr17 40970316 40970358 -48534195 + (CA)n Simple_repeat Simple_repeat 2 43 0 2060 76 4 0 chr17 40970575 40970838 -48533715 + AluY SINE Alu 33 296 -15 1228 187 42 49 chr17 40970854 40971167 -48533386 + AluJo SINE Alu 1 311 0 2390 79 0 0 chr17 40971171 40971474 -48533079 + AluSx SINE Alu 1 303 -9 596 336 55 0 chr17 40971762 40971979 -48532574 - MIR SINE MIR -31 231 3 1666 188 3 0 chr17 40972114 40972401 -48532152 + AluJo SINE Alu 5 292 -20 229 287 74 56 chr17 40972417 40972525 -48532028 + L2 LINE L2 3158 3267 -5 464 278 44 50 chr17 40972927 40973107 -48531446 - MIR3 SINE MIR -11 197 19 554 341 130 33 chr17 40973591 40974051 -48530502 + L2 LINE L2 2231 2735 -579 682 182 53 8 chr17 40974090 40974222 -48530331 - FLAM_C SINE Alu -5 138 1 2326 96 0 6 chr17 40974246 40974560 -48529993 - AluSx SINE Alu 0 312 1 648 299 41 89 chr17 40974560 40974974 -48529579 + L2 LINE L2 2878 3271 -1 283 269 179 41 chr17 40975473 40975618 -48528935 - MIR SINE MIR 0 262 98 1969 100 60 0 chr17 40977469 40977750 -48526803 + AluSx SINE Alu 1 298 -14 208 316 120 73 chr17 40978519 40978835 -48525718 + L2 LINE L2 2637 2967 -347 2162 115 0 0 chr17 40978898 40979193 -48525360 - AluSx SINE Alu -17 295 1 1269 114 0 0 chr17 40980055 40980231 -48524322 - AluSg/x SINE Alu 0 310 135 1962 203 26 34 chr17 40980523 40980992 -48523561 + MLT1C LTR MaLR 1 465 -2 1910 125 3 33 chr17 40981172 40981475 -48523078 + AluJb SINE Alu 5 298 -14 623 259 6 19 chr17 40981620 40981782 -48522771 + MLT1J LTR MaLR 221 380 -131 294 331 71 7 chr17 40981894 40982048 -48522505 + L2 LINE L2 2895 3058 -214 304 278 33 11 chr17 40983352 40983442 -48521111 - MIR SINE MIR -73 189 98 2123 99 6 16 chr17 40983443 40983755 -48520798 + AluSx SINE Alu 1 309 -3 186 252 54 108 chr17 40983917 40984028 -48520525 + L2 LINE L2 3168 3272 0 266 277 109 10 chr17 40984674 40984775 -48519778 - MLT1L LTR MaLR -133 482 372 1536 156 0 41 chr17 40985091 40985361 -48519192 + AluJo SINE Alu 33 291 -21 395 176 8 42 chr17 40985668 40985787 -48518766 + CT-rich Low_complexity Low_complexity 2 116 0 1978 136 7 3 chr17 40985803 40986111 -48518442 - AluSq SINE Alu -1 312 4 956 106 21 0 chr17 40986923 40987065 -48517488 + L1MA5A LINE L1 6149 6293 -4 1821 139 3 3 chr17 40987076 40987363 -48517190 + AluJb SINE Alu 4 290 -22 1775 107 54 4 chr17 40987462 40987742 -48516811 + MER49 LTR ERV1 1 294 -629 1553 99 144 15 chr17 40987761 40988024 -48516529 - AluSg1 SINE Alu -12 297 1 794 141 134 47 chr17 40988217 40988366 -48516187 - AluJo SINE Alu -4 298 137 1304 98 26 41 chr17 40988369 40988604 -48515949 - AluSp SINE Alu -8 305 1 902 128 0 23 chr17 40988618 40988751 -48515802 - FLAM_C SINE Alu -3 130 1 1147 265 17 17 chr17 40988751 40989045 -48515508 + MER4D LTR ERV1 574 867 -36 1102 271 49 49 chr17 40989242 40989461 -48515092 + MLT1J LTR MaLR 3 221 -290 1791 126 8 0 chr17 40989461 40989722 -48514831 + AluSx SINE Alu 37 299 -13 1931 98 91 7 chr17 40989731 40990017 -48514536 + AluSx SINE Alu 1 310 -2 1102 271 49 49 chr17 40990017 40990153 -48514400 + MLT1J LTR MaLR 228 368 -143 266 366 41 45 chr17 40990674 40990805 -48513748 + MIR SINE MIR 16 147 -115 2163 102 3 0 chr17 40990805 40991100 -48513453 - AluSq SINE Alu -17 296 1 266 366 41 45 chr17 40991100 40991214 -48513339 + MIR SINE MIR 147 260 -2 435 223 29 0 chr17 40991688 40991791 -48512762 + MER5A DNA MER1_type 4 109 -80 1798 143 3 3 chr17 40991923 40992209 -48512344 + AluJo SINE Alu 3 288 -24 517 269 113 0 chr17 40992231 40992391 -48512162 + MIR SINE MIR 11 188 -74 1627 152 7 14 chr17 40992429 40992712 -48511841 - AluJb SINE Alu -15 297 17 558 339 28 3 chr17 40993243 40993529 -48511024 - L1ME4a LINE L1 -175 5946 5654 2343 87 0 0 chr17 40993582 40993882 -48510671 + AluSq SINE Alu 1 300 -13 3296 165 39 19 chr17 40993919 40994512 -48510041 - MER6A DNA MER2_type 0 605 1 305 307 40 0 chr17 40994527 40994628 -48509925 - MER5A DNA MER1_type -83 106 2 266 253 145 0 chr17 40994751 40994834 -48509719 - MIR SINE MIR -65 197 103 784 127 7 86 chr17 40995141 40995284 -48509269 + L1M3 LINE L1 5271 5387 -787 2204 64 54 10 chr17 40995284 40995579 -48508974 + AluY SINE Alu 1 308 -3 784 127 7 86 chr17 40995579 40995652 -48508901 + L1M3 LINE L1 5387 5464 -710 399 21 0 0 chr17 40995655 40995703 -48508850 + (TC)n Simple_repeat Simple_repeat 2 49 0 443 267 0 0 chr17 40995729 40995819 -48508734 + L1MC4 LINE L1 6614 6703 -1339 2249 82 0 7 chr17 40995838 40996130 -48508423 - AluSq SINE Alu -23 290 1 3799 133 47 64 chr17 40996130 40996340 -48508213 + L1MB5 LINE L1 5468 5680 -494 2171 105 0 3 chr17 40996340 40996636 -48507917 + AluSg SINE Alu 2 296 -14 3799 133 47 64 chr17 40996636 40996647 -48507906 + L1MB5 LINE L1 5680 5690 -484 2189 120 0 0 chr17 40996647 40996947 -48507606 + AluSx SINE Alu 2 301 -11 2069 93 0 4 chr17 40996947 40997225 -48507328 + AluSc SINE Alu 1 277 -32 1033 52 0 58 chr17 40997226 40997417 -48507136 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3799 133 47 64 chr17 40997417 40997781 -48506772 + L1MB5 LINE L1 5689 6058 -116 1966 157 0 0 chr17 40997781 40998086 -48506467 + AluJb SINE Alu 1 305 -7 3799 133 47 64 chr17 40998086 40998166 -48506387 + L1MB5 LINE L1 6058 6129 -45 1935 93 25 7 chr17 40998166 40998472 -48506081 - AluSx SINE Alu 0 311 1 3799 133 47 64 chr17 40998472 40998518 -48506035 + L1MB5 LINE L1 6129 6174 0 245 313 0 12 chr17 40998796 40998879 -48505674 - MIR SINE MIR -146 116 35 2200 117 3 0 chr17 40998952 40999261 -48505292 - AluSx SINE Alu 0 312 3 304 236 16 89 chr17 41001157 41001230 -48503323 - L2 LINE L2 -85 3228 3166 1815 143 0 26 chr17 41001230 41001537 -48503016 - AluJo SINE Alu -13 299 1 304 236 16 89 chr17 41001537 41001586 -48502967 - L2 LINE L2 -147 3166 3115 2444 68 10 0 chr17 41001586 41001894 -48502659 + AluY SINE Alu 1 311 0 2001 144 3 3 chr17 41001954 41002266 -48502287 + AluSx SINE Alu 1 312 0 578 338 92 36 chr17 41002298 41002798 -48501755 - L3 LINE CR1 -345 1232 705 2087 113 3 7 chr17 41003005 41003307 -48501246 + AluSx SINE Alu 1 301 -11 244 324 81 36 chr17 41003339 41003384 -48501169 - MER5A DNA MER1_type -6 183 141 180 0 0 0 chr17 41003384 41003404 -48501149 + (CAA)n Simple_repeat Simple_repeat 2 21 0 244 324 81 36 chr17 41003404 41003469 -48501084 - MER5A DNA MER1_type -48 141 68 714 181 19 25 chr17 41003863 41004023 -48500530 - MER96B DNA MER1_type? -2 415 257 921 104 0 8 chr17 41004025 41004159 -48500394 - FLAM_C SINE Alu -10 133 1 225 188 62 62 chr17 41004159 41004239 -48500314 - MER96B DNA MER1_type? -156 261 182 2603 270 91 64 chr17 41004254 41004891 -48499662 + HAL1 LINE L1 939 1557 -950 2075 111 0 14 chr17 41004891 41005188 -48499365 + AluSx SINE Alu 9 301 -11 2603 270 91 64 chr17 41005188 41005542 -48499011 + HAL1 LINE L1 1557 1900 -607 1527 188 33 10 chr17 41005542 41005846 -48498707 - AluJb SINE Alu -1 311 1 2603 270 91 64 chr17 41005846 41006374 -48498179 + HAL1 LINE L1 1900 2501 -6 21 0 0 0 chr17 41006377 41006398 -48498155 + AT_rich Low_complexity Low_complexity 1 21 0 244 260 0 21 chr17 41006471 41006567 -48497986 + (CA)n Simple_repeat Simple_repeat 1 94 0 409 326 122 13 chr17 41007585 41007815 -48496738 - MIR SINE MIR -4 258 4 * 639 170 16 129 chr17 41007815 41007911 -48496642 - MER5B DNA MER1_type -25 153 86 2411 69 0 0 chr17 41007911 41008215 -48496338 - AluY SINE Alu -7 304 1 639 170 16 129 chr17 41008215 41008293 -48496260 - MER5B DNA MER1_type -92 86 1 345 100 20 0 chr17 41008396 41008446 -48496107 - MER20 DNA MER1_type 0 219 169 4566 144 43 28 chr17 41008452 41008640 -48495913 - L1MB3 LINE L1 -1 6182 5998 1724 172 3 13 chr17 41008640 41008943 -48495610 - AluJo SINE Alu -12 300 1 4566 144 43 28 chr17 41008943 41009619 -48494934 - L1MB3 LINE L1 -185 5998 5305 916 163 0 65 chr17 41009621 41009805 -48494748 - MER20 DNA MER1_type -32 187 16 481 318 35 6 chr17 41009873 41010046 -48494507 + MER117 DNA MER1_type 4 181 -16 1708 159 0 43 chr17 41010142 41010444 -48494109 - AluJb SINE Alu -23 289 1 2303 94 3 0 chr17 41010466 41010775 -48493778 + AluSq SINE Alu 1 310 -3 310 314 15 57 chr17 41011749 41011976 -48492577 + MIR SINE MIR 20 237 -25 930 252 46 0 chr17 41012474 41012712 -48491841 - MIR SINE MIR 0 262 14 201 175 0 0 chr17 41013228 41013268 -48491285 + G-rich Low_complexity Low_complexity 4 43 0 437 335 54 10 chr17 41013341 41013544 -48491009 + MIR SINE MIR 3 214 -48 706 94 0 0 chr17 41013581 41013677 -48490876 + LTR26E LTR ERV1 1 96 -526 2118 128 0 0 chr17 41013677 41013981 -48490572 - AluSx SINE Alu -8 304 1 1259 187 127 26 chr17 41014005 41014272 -48490281 + AluJo SINE Alu 1 294 -8 38 0 0 0 chr17 41014274 41014312 -48490241 + AT_rich Low_complexity Low_complexity 1 38 0 1206 131 0 0 chr17 41014312 41014488 -48490065 + FRAM SINE Alu 1 168 -8 786 159 98 54 chr17 41014491 41014559 -48489994 + LTR26E LTR ERV1 280 344 -278 2421 75 0 7 chr17 41014559 41014866 -48489687 - AluSg SINE Alu -5 305 1 786 159 98 54 chr17 41014866 41015082 -48489471 + LTR26E LTR ERV1 344 622 0 270 136 0 0 chr17 41015266 41015310 -48489243 + (GGGGA)n Simple_repeat Simple_repeat 5 48 0 186 103 0 0 chr17 41015383 41015412 -48489141 + (CTCA)n Simple_repeat Simple_repeat 1 29 0 265 269 289 29 chr17 41015421 41015663 -48488890 - L2 LINE L2 -33 3280 2976 789 184 40 33 chr17 41015826 41015978 -48488575 - AluJo/FRAM SINE Alu -13 289 137 1182 132 11 0 chr17 41015981 41016163 -48488390 - AluSx SINE Alu 0 312 129 22 35 0 0 chr17 41016165 41016194 -48488359 + AT_rich Low_complexity Low_complexity 1 29 0 1106 66 0 0 chr17 41016208 41016345 -48488208 - AluSx SINE Alu -175 137 1 798 158 0 0 chr17 41016352 41016472 -48488081 - FLAM_C SINE Alu -21 122 3 213 274 0 0 chr17 41017127 41017189 -48487364 - L3b LINE CR1 -208 1375 1314 496 240 62 8 chr17 41017642 41017771 -48486782 - MIR SINE MIR -55 153 18 210 286 71 0 chr17 41018142 41018226 -48486327 + L3b LINE CR1 1309 1398 -185 360 244 28 39 chr17 41019139 41019319 -48485234 + G-rich Low_complexity Low_complexity 3 180 0 243 88 0 0 chr17 41020381 41020415 -48484138 + (A)n Simple_repeat Simple_repeat 1 34 0 414 0 0 0 chr17 41020945 41020991 -48483562 + (TG)n Simple_repeat Simple_repeat 2 47 0 707 108 10 0 chr17 41020992 41021094 -48483459 - FRAM SINE Alu -15 161 59 597 158 189 0 chr17 41021096 41021223 -48483330 - MER5A DNA MER1_type -38 151 1 625 41 0 0 chr17 41021343 41021416 -48483137 - tRNA-Cys-TGC tRNA tRNA -2 73 1 625 41 0 0 chr17 41022100 41022173 -48482380 - tRNA-Cys-TGC tRNA tRNA -2 73 1 2391 41 7 0 chr17 41022372 41022664 -48481889 + AluY SINE Alu 1 294 -17 2142 66 16 20 chr17 41022959 41023262 -48481291 + AluSc SINE Alu 1 302 -7 1268 102 0 0 chr17 41023650 41023827 -48480726 - AluSg/x SINE Alu -2 310 134 2088 118 10 0 chr17 41023827 41024132 -48480421 - AluSx SINE Alu -4 308 1 382 296 90 64 chr17 41024667 41024900 -48479653 - L2 LINE L2 -4 3268 3030 269 287 33 57 chr17 41024996 41025118 -48479435 + L2 LINE L2 3143 3261 -11 2260 93 3 0 chr17 41025118 41025420 -48479133 + AluSp SINE Alu 1 303 -10 2114 62 0 18 chr17 41025422 41025698 -48478855 + AluY SINE Alu 1 271 -40 554 117 0 11 chr17 41025712 41025806 -48478747 + (GGGA)n Simple_repeat Simple_repeat 4 96 0 1853 143 3 13 chr17 41025942 41026243 -48478310 + AluJb SINE Alu 2 299 -13 196 291 29 29 chr17 41026324 41026427 -48478126 + L2 LINE L2 2982 3084 -229 738 197 0 7 chr17 41026445 41026582 -48477971 - FLAM_A SINE Alu -1 141 6 1369 172 0 23 chr17 41026630 41026886 -48477667 - AluJo SINE Alu 0 312 63 2346 90 0 0 chr17 41026895 41027207 -48477346 - AluSp SINE Alu -1 312 1 804 202 29 12 chr17 41027207 41027380 -48477173 + L2 LINE L2 3135 3310 -3 182 259 129 12 chr17 41027383 41027468 -48477085 - MIR SINE MIR -71 191 97 * 710 264 60 26 chr17 41027467 41027661 -48476892 + L2 LINE L2 2954 3161 -152 2098 110 33 3 chr17 41027661 41027960 -48476593 + AluSq SINE Alu 1 308 -5 710 264 60 26 chr17 41027960 41028034 -48476519 + L2 LINE L2 3161 3231 -82 512 297 13 13 chr17 41028546 41028701 -48475852 - MIR SINE MIR -79 183 29 221 226 38 0 chr17 41028791 41028844 -48475709 - MIR SINE MIR -133 129 75 2139 109 7 13 chr17 41029122 41029426 -48475127 - AluSx SINE Alu -10 302 1 782 262 0 24 chr17 41029467 41029677 -48474876 - MIR SINE MIR -25 237 33 2135 96 0 4 chr17 41029919 41030200 -48474353 - AluSx SINE Alu -21 291 12 266 325 13 0 chr17 41030208 41030285 -48474268 - MIR SINE MIR -106 156 79 212 264 104 28 chr17 41030583 41030689 -48473864 - L2 LINE L2 -20 3252 3139 832 119 0 77 chr17 41030719 41030862 -48473691 - FLAM_C SINE Alu -1 132 1 250 299 264 0 chr17 41030862 41030949 -48473604 - MER5A DNA MER1_type -6 183 74 1625 139 75 0 chr17 41030950 41031302 -48473251 - AluSx SINE Alu 0 312 1 645 116 0 0 chr17 41031306 41031401 -48473152 - AluSg/x SINE Alu -3 309 215 1972 105 0 11 chr17 41031401 41031678 -48472875 - AluSx SINE Alu -38 274 1 252 0 0 0 chr17 41031680 41031708 -48472845 + (TTG)n Simple_repeat Simple_repeat 3 30 0 944 61 0 38 chr17 41031708 41031839 -48472714 - AluSq/x SINE Alu -187 126 1 341 250 0 0 chr17 41031844 41031912 -48472641 - MER5A DNA MER1_type -118 71 4 330 337 119 24 chr17 41034394 41034932 -48469621 + L2 LINE L2 2606 3224 -48 219 203 0 0 chr17 41035471 41035530 -48469023 + A-rich Low_complexity Low_complexity 1 59 0 195 42 0 0 chr17 41035583 41035607 -48468946 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 1538 146 47 25 chr17 41035670 41035974 -48468579 - AluJb SINE Alu 0 314 5 209 390 0 0 chr17 41035979 41036038 -48468515 - L2 LINE L2 -91 3181 3123 234 250 0 0 chr17 41036104 41036156 -48468397 + LTR30 LTR ERV1 1 52 -670 1775 104 30 190 chr17 41036156 41036404 -48468149 + LTR12 LTR ERV1 55 109 -605 2427 81 0 0 chr17 41036404 41036714 -48467839 + AluSg SINE Alu 1 310 0 1775 104 30 190 chr17 41036714 41037035 -48467518 + LTR12 LTR ERV1 109 480 -234 2230 113 0 0 chr17 41037475 41037785 -48466768 - AluSx SINE Alu 0 312 3 249 295 171 31 chr17 41037915 41038044 -48466509 + MIR SINE MIR 8 154 -108 329 355 147 37 chr17 41038069 41038126 -48466427 + L2 LINE L2 2246 2295 -1019 2055 136 7 0 chr17 41038126 41038435 -48466118 - AluSx SINE Alu -1 311 1 329 355 147 37 chr17 41038435 41038572 -48465981 + L2 LINE L2 2295 2416 -898 2156 107 27 0 chr17 41038572 41038872 -48465681 - AluSx SINE Alu -4 308 1 329 355 147 37 chr17 41038872 41038885 -48465668 + L2 LINE L2 2416 2426 -888 2335 85 7 0 chr17 41038885 41039192 -48465361 - AluSg SINE Alu -1 309 1 329 355 147 37 chr17 41039192 41039253 -48465300 + L2 LINE L2 2426 2479 -835 1535 144 45 55 chr17 41039253 41039565 -48464988 - AluJo SINE Alu -3 309 1 329 355 147 37 chr17 41039565 41039811 -48464742 + L2 LINE L2 2479 2820 -494 339 294 221 36 chr17 41039874 41040150 -48464403 + L2 LINE L2 2945 3271 -1 272 234 64 32 chr17 41040197 41040291 -48464262 + MIR SINE MIR 33 129 -79 381 22 0 0 chr17 41040349 41040395 -48464158 + (CA)n Simple_repeat Simple_repeat 2 47 0 2199 79 38 7 chr17 41040479 41040771 -48463782 + AluSq SINE Alu 5 305 -8 398 233 67 17 chr17 41043927 41044047 -48460506 + MIR3 SINE MIR 34 159 -49 377 308 113 22 chr17 41045293 41045478 -48459075 - MIR3 SINE MIR -3 205 4 1668 156 29 19 chr17 41045986 41046293 -48458260 - AluJo SINE Alu -2 310 1 405 313 46 0 chr17 41046319 41046450 -48458103 - MIR SINE MIR 0 262 126 676 244 108 79 chr17 41046460 41046622 -48457931 + L1MC4 LINE L1 7470 7626 -416 2158 99 41 0 chr17 41046622 41046916 -48457637 + AluY SINE Alu 1 306 -5 2259 89 30 0 chr17 41046917 41047219 -48457334 + AluY SINE Alu 1 311 0 1993 123 0 33 chr17 41047227 41047527 -48457026 + AluSx SINE Alu 1 290 -22 676 244 108 79 chr17 41047527 41047596 -48456957 + L1MC4 LINE L1 7632 7698 -344 1944 127 10 7 chr17 41047596 41047887 -48456666 + AluSq SINE Alu 6 297 -16 676 244 108 79 chr17 41047887 41047983 -48456570 + L1MC4 LINE L1 7698 7790 -252 2217 120 0 16 chr17 41047983 41048300 -48456253 + AluSx SINE Alu 1 312 0 676 244 108 79 chr17 41048300 41048355 -48456198 + L1MC4 LINE L1 7790 7842 -200 930 129 0 0 chr17 41048355 41048487 -48456066 - FLAM_C SINE Alu 0 133 2 676 244 108 79 chr17 41048487 41048647 -48455906 + L1MC4 LINE L1 7842 8042 0 1972 138 0 0 chr17 41048691 41049004 -48455549 - AluSx SINE Alu 0 312 1 633 216 111 40 chr17 41049004 41049193 -48455360 - MIR SINE MIR -41 221 16 256 252 19 28 chr17 41049238 41049345 -48455208 - MIR SINE MIR -56 206 101 1929 105 10 46 chr17 41049345 41049491 -48455062 + AluSx SINE Alu 1 132 -180 2179 111 3 0 chr17 41049491 41049789 -48454764 + AluSg SINE Alu 1 299 -11 1929 105 10 46 chr17 41049789 41049947 -48454606 + AluSx SINE Alu 132 294 -18 2160 75 0 11 chr17 41050029 41050359 -48454194 + AluSc SINE Alu 1 327 0 237 279 87 10 chr17 41050386 41050490 -48454063 - MIR SINE MIR -77 185 74 1289 175 13 0 chr17 41050743 41050971 -48453582 + AluJo SINE Alu 81 311 -1 288 312 108 45 chr17 41051125 41051303 -48453250 - MIR SINE MIR -62 200 13 243 267 0 35 chr17 41052781 41052867 -48451686 + GA-rich Low_complexity Low_complexity 3 85 0 377 229 29 67 chr17 41054883 41055071 -48449482 - MIR SINE MIR -58 150 3 1985 131 3 0 chr17 41055342 41055645 -48448908 + AluSx SINE Alu 1 304 0 1656 126 49 8 chr17 41055657 41055904 -48448649 + AluSg SINE Alu 35 291 -19 1930 128 10 3 chr17 41055906 41056194 -48448359 + AluSg SINE Alu 3 292 -18 2072 123 3 3 chr17 41056371 41056673 -48447880 + AluSq SINE Alu 1 302 -11 2172 113 0 0 chr17 41056693 41057012 -48447541 + AluSg SINE Alu 1 319 0 417 189 256 0 chr17 41057015 41057105 -48447448 + AluJo/FLAM SINE Alu 2 114 -188 2125 100 4 0 chr17 41057105 41057408 -48447145 - AluSp SINE Alu 0 304 1 2197 88 0 19 chr17 41057440 41057748 -48446805 + AluSg SINE Alu 1 302 -8 1698 145 76 0 chr17 41057750 41058026 -48446527 + AluJo SINE Alu 1 297 -15 2114 125 0 0 chr17 41058034 41058338 -48446215 - AluSx SINE Alu -8 304 1 271 250 193 57 chr17 41058356 41058532 -48446021 - MIR SINE MIR 0 262 63 2339 80 0 0 chr17 41058533 41058833 -48445720 + AluY SINE Alu 1 300 -11 399 303 0 0 chr17 41060648 41060933 -48443620 + (CA)n Simple_repeat Simple_repeat 1 285 0 201 163 0 61 chr17 41064393 41064442 -48440111 + G-rich Low_complexity Low_complexity 3 48 0 237 271 0 28 chr17 41065236 41065343 -48439210 + CT-rich Low_complexity Low_complexity 2 105 0 * 239 217 17 61 chr17 41065263 41065378 -48439175 + C-rich Low_complexity Low_complexity 5 114 0 292 281 58 75 chr17 41066077 41066275 -48438278 + MIR SINE MIR 10 196 -55 2448 67 0 0 chr17 41066945 41067242 -48437311 - AluSx SINE Alu -15 297 1 23 0 0 0 chr17 41067243 41067266 -48437287 + AT_rich Low_complexity Low_complexity 1 23 0 990 142 31 0 chr17 41069011 41069173 -48435380 - AluSg/x SINE Alu -15 295 129 2096 140 3 0 chr17 41069175 41069482 -48435071 - AluSx SINE Alu -4 308 1 663 192 33 0 chr17 41069599 41069719 -48434834 + FLAM_A SINE Alu 1 124 -9 209 206 127 0 chr17 41070448 41070511 -48434042 + MIR SINE MIR 126 196 -66 2301 105 0 0 chr17 41070785 41071091 -48433462 - AluY SINE Alu -5 306 1 1952 131 14 0 chr17 41071127 41071417 -48433136 - AluSx SINE Alu -18 294 1 2048 116 14 0 chr17 41072381 41072675 -48431878 - AluSx SINE Alu -14 298 1 1265 114 81 76 chr17 41072993 41073136 -48431417 - AluSx SINE Alu -27 285 139 2866 9 0 0 chr17 41073136 41073454 -48431099 - AluYb8 SINE Alu 0 318 1 1265 114 81 76 chr17 41073454 41073546 -48431007 - AluSx SINE Alu -173 139 49 2037 110 21 0 chr17 41073791 41074081 -48430472 + AluSp SINE Alu 1 296 -17 206 220 20 0 chr17 41074198 41074248 -48430305 - MIR SINE MIR -73 135 85 1907 143 3 16 chr17 41074357 41074664 -48429889 + AluJb SINE Alu 1 303 -9 926 215 0 11 chr17 41075149 41075326 -48429227 + FAM SINE Alu 1 175 0 2220 103 0 13 chr17 41075335 41075647 -48428906 + AluSx SINE Alu 1 308 -4 200 274 14 55 chr17 41075733 41075806 -48428747 - MIR3 SINE MIR -40 168 99 423 348 12 12 chr17 41076823 41076984 -48427569 + MIR3 SINE MIR 5 165 -43 399 336 94 0 chr17 41076982 41077131 -48427422 + MIR SINE MIR 81 243 -19 * 2277 105 0 3 chr17 41078883 41079196 -48425357 - AluSx SINE Alu 0 312 1 238 275 169 56 chr17 41080218 41080378 -48424175 - MIR3 SINE MIR -21 187 10 2299 98 0 0 chr17 41081280 41081587 -48422966 - AluSx SINE Alu -5 307 1 21 0 0 0 chr17 41083116 41083137 -48421416 + GC_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr17 41085452 41085487 -48419066 + GC_rich Low_complexity Low_complexity 1 35 0 1842 157 7 7 chr17 41086232 41086538 -48418015 - AluJo SINE Alu -3 309 4 1882 146 58 0 chr17 41086585 41086880 -48417673 - AluJo SINE Alu 0 312 1 385 303 119 38 chr17 41087669 41087762 -48416791 + MIR SINE MIR 20 104 -158 2000 116 14 3 chr17 41087762 41088055 -48416498 - AluSq SINE Alu -17 296 1 385 303 119 38 chr17 41088055 41088146 -48416407 + MIR SINE MIR 104 219 -43 22 0 0 0 chr17 41088169 41088191 -48416362 + AT_rich Low_complexity Low_complexity 1 22 0 604 195 0 47 chr17 41088198 41088326 -48416227 - FLAM_C SINE Alu -19 124 3 2485 59 0 0 chr17 41088340 41088644 -48415909 - AluY SINE Alu -7 304 1 302 292 192 8 chr17 41089006 41089126 -48415427 + L2 LINE L2 3118 3259 -13 185 65 32 0 chr17 41089126 41089157 -48415396 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 821 85 0 0 chr17 41089248 41089354 -48415199 - AluSx SINE Alu -13 297 192 253 57 0 0 chr17 41089355 41089390 -48415163 - AluSx SINE Alu -186 117 83 1833 152 10 7 chr17 41090090 41090380 -48414173 + AluJb SINE Alu 5 295 -17 213 39 0 0 chr17 41090905 41090931 -48413622 + (CAG)n Simple_repeat Simple_repeat 3 28 0 384 137 359 0 chr17 41091081 41091198 -48413355 - Charlie8 DNA MER1_type -2153 264 106 558 241 48 0 chr17 41091225 41091391 -48413162 - L1MC4a LINE L1 -1870 5938 5765 626 141 0 20 chr17 41091415 41091514 -48413039 + AluJ/FLAM SINE Alu 6 102 -210 301 270 113 62 chr17 41091917 41092272 -48412281 + L2 LINE L2 2898 3270 -2 197 225 125 62 chr17 41093042 41093122 -48411431 + MIR3 SINE MIR 76 160 -48 2175 89 14 0 chr17 41093124 41093415 -48411138 - AluY SINE Alu -16 295 1 2334 60 0 0 chr17 41093422 41093739 -48410814 - AluY SINE Alu 0 317 1 2185 96 0 16 chr17 41093739 41094042 -48410511 - AluSg SINE Alu -12 298 1 625 279 34 6 chr17 41094144 41094323 -48410230 - MIR SINE MIR -51 211 28 887 304 97 19 chr17 41094481 41094892 -48409661 - L3 LINE CR1 -5 1572 1130 270 262 25 66 chr17 41095962 41096084 -48408469 + MIR3 SINE MIR 44 160 -48 305 255 85 0 chr17 41096107 41096186 -48408367 + MIR SINE MIR 136 228 -34 2171 125 0 3 chr17 41096186 41096498 -48408055 + AluSq SINE Alu 1 311 -2 305 255 85 0 chr17 41096498 41096524 -48408029 + MIR SINE MIR 228 250 -12 936 205 0 21 chr17 41096528 41096718 -48407835 - AluJb SINE Alu -6 306 121 23 33 0 0 chr17 41096740 41096770 -48407783 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr17 41098891 41098912 -48405641 + GC_rich Low_complexity Low_complexity 1 21 0 212 358 16 32 chr17 41099134 41099257 -48405296 - L2 LINE L2 -547 2767 2647 1616 178 10 23 chr17 41099345 41099476 -48405077 + AluJb SINE Alu 1 132 -180 2152 100 21 3 chr17 41099476 41099765 -48404788 + AluSg SINE Alu 1 294 -16 1616 178 10 23 chr17 41099765 41099937 -48404616 + AluJb SINE Alu 132 300 -12 790 167 0 62 chr17 41099966 41099995 -48404558 + MIR SINE MIR 4 33 -229 2306 87 3 0 chr17 41099995 41100293 -48404260 + AluY SINE Alu 1 299 -12 790 167 0 62 chr17 41100293 41100425 -48404128 + MIR SINE MIR 33 155 -107 2045 90 83 0 chr17 41100525 41100813 -48403740 + AluSx SINE Alu 1 312 0 2043 142 3 19 chr17 41100827 41101144 -48403409 + AluSx SINE Alu 1 312 0 395 244 73 41 chr17 41101250 41101373 -48403180 - MIR SINE MIR -59 203 77 2325 97 3 0 chr17 41101411 41101719 -48402834 + AluSx SINE Alu 1 309 -3 222 305 86 52 chr17 41101772 41101946 -48402607 - L2 LINE L2 -92 3221 3042 279 0 0 0 chr17 41102237 41102268 -48402285 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr17 41102466 41102487 -48402066 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 303 93 0 0 chr17 41103436 41103479 -48401074 + (TG)n Simple_repeat Simple_repeat 1 43 0 348 217 200 42 chr17 41105040 41105160 -48399393 - MIR SINE MIR -71 191 53 2032 113 30 0 chr17 41105179 41105479 -48399074 + AluSx SINE Alu 1 309 -3 409 348 55 6 chr17 41105519 41105700 -48398853 - L2 LINE L2 -5 3308 3119 322 235 76 17 chr17 41105727 41105846 -48398707 - MIR SINE MIR -109 153 28 2179 114 7 0 chr17 41106432 41106740 -48397813 - AluSp SINE Alu 0 313 4 191 289 53 0 chr17 41106740 41106816 -48397737 + MIR SINE MIR 65 144 -118 226 118 98 0 chr17 41106971 41107022 -48397531 + MER53 DNA DNA 1 56 -133 1961 114 37 10 chr17 41107027 41107326 -48397227 - AluSx SINE Alu -1 311 5 2030 130 3 13 chr17 41107328 41107629 -48396924 - AluSx SINE Alu -13 299 2 1703 179 0 10 chr17 41107643 41107940 -48396613 - AluJo SINE Alu -13 299 6 21 36 0 0 chr17 41107944 41107972 -48396581 + AT_rich Low_complexity Low_complexity 1 28 0 828 88 0 0 chr17 41107973 41108086 -48396467 + AluSg/x SINE Alu 190 302 -8 539 171 9 0 chr17 41108087 41108198 -48396355 + MER53 DNA DNA 73 184 -5 224 326 22 11 chr17 41108401 41108490 -48396063 - L2 LINE L2 -527 2787 2698 1841 60 0 21 chr17 41108502 41108737 -48395816 + AluY SINE Alu 1 230 -81 1384 73 17 0 chr17 41108737 41108916 -48395637 + AluSp SINE Alu 87 268 -45 2109 117 0 3 chr17 41108931 41109230 -48395323 + AluSx SINE Alu 1 298 -14 2351 90 0 0 chr17 41109729 41110039 -48394514 + AluSg SINE Alu 1 310 0 505 255 224 10 chr17 41111453 41111645 -48392908 - MIR SINE MIR -6 256 24 1142 114 13 0 chr17 41111913 41112071 -48392482 - AluSq SINE Alu -20 293 134 2172 84 20 7 chr17 41112071 41112370 -48392183 - AluY SINE Alu -8 303 1 543 242 54 7 chr17 41112370 41112519 -48392034 - MIR3 SINE MIR -12 196 41 2319 80 7 3 chr17 41113209 41113511 -48391042 - AluSg SINE Alu -7 303 1 2040 118 6 22 chr17 41114089 41114403 -48390150 + AluSx SINE Alu 1 309 -3 2209 97 13 0 chr17 41115105 41115405 -48389148 + AluSg SINE Alu 1 304 -6 21 36 0 0 chr17 41115858 41115886 -48388667 + AT_rich Low_complexity Low_complexity 1 28 0 561 244 47 0 chr17 41116219 41116346 -48388207 - FLAM_A SINE Alu 0 133 1 1951 123 3 20 chr17 41116403 41116704 -48387849 - AluSg SINE Alu -14 296 1 24 0 0 0 chr17 41116707 41116731 -48387822 + AT_rich Low_complexity Low_complexity 1 24 0 1644 117 4 0 chr17 41116749 41116979 -48387574 + AluSx SINE Alu 1 231 -81 245 279 36 18 chr17 41117007 41117118 -48387435 - L1M4 LINE L1 -1107 5039 4927 472 87 22 87 chr17 41117119 41117211 -48387342 - AluSp/q SINE Alu -7 306 221 1805 123 9 72 chr17 41117437 41117578 -48386975 + AluSq SINE Alu 3 151 -162 2067 96 0 0 chr17 41117578 41117850 -48386703 + AluSc SINE Alu 1 272 -37 246 32 0 0 chr17 41117852 41117883 -48386670 + (CAA)n Simple_repeat Simple_repeat 1 31 0 1805 123 9 72 chr17 41117883 41118070 -48386483 + AluSq SINE Alu 152 313 0 577 265 111 16 chr17 41118561 41118750 -48385803 - MIR SINE MIR -49 213 7 35 24 0 0 chr17 41119188 41119230 -48385323 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr17 41119276 41119297 -48385256 + AT_rich Low_complexity Low_complexity 1 21 0 1913 83 112 7 chr17 41120515 41120791 -48383762 - AluSg SINE Alu -5 305 1 224 209 0 0 chr17 41122567 41122610 -48381943 + (CAGAGA)n Simple_repeat Simple_repeat 2 44 0 206 170 43 0 chr17 41123045 41123092 -48381461 + GA-rich Low_complexity Low_complexity 4 52 0 2324 65 10 0 chr17 41126179 41126470 -48378083 - AluSg SINE Alu -16 294 1 757 116 39 39 chr17 41126713 41126842 -48377711 + AluJo/FLAM SINE Alu 2 130 -172 1614 106 122 4 chr17 41126843 41127097 -48377456 + AluSx SINE Alu 28 311 -1 203 161 18 0 chr17 41127950 41128006 -48376547 + (CGG)n Simple_repeat Simple_repeat 2 58 0 24 32 0 0 chr17 41128833 41128864 -48375689 + GC_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr17 41131264 41131288 -48373265 + AT_rich Low_complexity Low_complexity 1 24 0 2364 87 0 7 chr17 41131294 41131594 -48372959 + AluSg SINE Alu 1 298 -12 2125 73 13 57 chr17 41131967 41132281 -48372272 - AluSg SINE Alu -10 300 1 358 262 11 0 chr17 41132288 41132395 -48372158 - MIR SINE MIR -49 159 51 417 203 40 0 chr17 41132523 41132597 -48371956 - AluJ/FLAM SINE Alu -224 78 2 1022 107 43 0 chr17 41133061 41133201 -48371352 + AluSq/x SINE Alu 1 146 -166 2486 70 0 7 chr17 41133290 41133592 -48370961 - AluY SINE Alu -10 301 2 279 295 54 72 chr17 41133593 41133647 -48370906 + MIR3 SINE MIR 45 98 -110 2358 114 0 0 chr17 41133647 41133953 -48370600 - AluSq SINE Alu -7 306 1 279 295 54 72 chr17 41133953 41134064 -48370489 + MIR3 SINE MIR 98 207 -1 2284 104 3 0 chr17 41134825 41135124 -48369429 - AluSx SINE Alu -12 300 1 2137 123 20 0 chr17 41135408 41135710 -48368843 + AluSx SINE Alu 1 308 -4 2228 54 22 18 chr17 41135712 41135988 -48368565 + AluY SINE Alu 23 299 -12 29 0 0 0 chr17 41136931 41136960 -48367593 + AT_rich Low_complexity Low_complexity 1 29 0 2227 104 10 0 chr17 41136960 41137259 -48367294 - AluSq SINE Alu -11 302 1 1784 124 76 4 chr17 41137261 41137536 -48367017 - AluSp SINE Alu -18 295 1 2157 133 7 0 chr17 41137801 41138109 -48366444 - AluSx SINE Alu -2 310 1 1898 132 34 3 chr17 41138110 41138405 -48366148 - AluSg SINE Alu -6 304 1 772 139 7 49 chr17 41138983 41139127 -48365426 - FLAM_C SINE Alu 0 143 6 2040 126 11 0 chr17 41139215 41139500 -48365053 - AluSg1 SINE Alu -21 288 1 1694 148 61 11 chr17 41139531 41139688 -48364865 - AluJb SINE Alu -21 291 113 2300 92 0 20 chr17 41139688 41139992 -48364561 - AluSx SINE Alu -14 298 1 1694 148 61 11 chr17 41139992 41140111 -48364442 - AluJb SINE Alu -199 113 1 2191 114 0 0 chr17 41140424 41140730 -48363823 - AluY SINE Alu 0 306 1 2489 78 0 7 chr17 41141137 41141446 -48363107 - AluSq SINE Alu -5 308 2 2492 66 0 10 chr17 41141486 41141791 -48362762 + AluSc SINE Alu 2 303 -6 1792 179 0 10 chr17 41141796 41142092 -48362461 - AluSx SINE Alu -19 293 1 1720 165 37 48 chr17 41142324 41142389 -48362164 - MER47A DNA MER2_type -1976 347 283 2094 147 0 0 chr17 41142389 41142688 -48361865 + AluJo SINE Alu 1 299 -13 2369 84 3 0 chr17 41142692 41142989 -48361564 + AluSq SINE Alu 5 302 -11 1720 165 37 48 chr17 41142989 41143269 -48361284 - MER47A DNA MER2_type -2043 280 1 22 0 0 0 chr17 41143615 41143637 -48360916 + AT_rich Low_complexity Low_complexity 1 22 0 1976 124 21 3 chr17 41143637 41143920 -48360633 - AluSx SINE Alu -24 288 1 1450 127 147 4 chr17 41143935 41144203 -48360350 - AluSg1 SINE Alu 0 304 2 2366 88 14 0 chr17 41144221 41144517 -48360036 - AluSc SINE Alu -9 300 1 397 148 0 0 chr17 41144937 41145005 -48359548 - AluJ/FRAM SINE Alu -13 289 228 976 178 0 0 chr17 41145039 41145196 -48359357 - FRAM SINE Alu -24 152 1 1999 103 40 26 chr17 41145290 41145592 -48358961 - AluSg SINE Alu -4 306 1 35 54 0 22 chr17 41145685 41145722 -48358831 + AT_rich Low_complexity Low_complexity 1 37 -53 2131 124 3 0 chr17 41145722 41146021 -48358532 - AluSc SINE Alu -9 300 1 1614 199 7 3 chr17 41146023 41146315 -48358238 - AluJo SINE Alu -19 293 1 35 54 0 22 chr17 41146315 41146366 -48358187 + AT_rich Low_complexity Low_complexity 38 90 0 2426 77 3 3 chr17 41146377 41146676 -48357877 + AluSx SINE Alu 1 299 -13 591 263 8 0 chr17 41146794 41146927 -48357626 - FLAM_C SINE Alu -8 135 2 2314 97 0 26 chr17 41147081 41147392 -48357161 - AluSc SINE Alu -6 303 1 1269 196 25 45 chr17 41147428 41147714 -48356839 - AluJo SINE Alu -30 282 3 2396 80 0 0 chr17 41147804 41148105 -48356448 - AluY SINE Alu -10 301 1 2208 97 7 3 chr17 41148152 41148452 -48356101 - AluSc SINE Alu -8 301 1 1776 173 3 10 chr17 41148452 41148747 -48355806 - AluJb SINE Alu -8 304 12 1843 146 20 20 chr17 41148767 41149069 -48355484 - AluJo SINE Alu -10 302 1 2248 105 0 0 chr17 41149093 41149389 -48355164 - AluSq SINE Alu -17 296 1 848 280 78 77 chr17 41149466 41150253 -48354300 - L2 LINE L2 -4 3309 2519 1345 136 0 126 chr17 41150277 41150460 -48354093 - AluJo SINE Alu -20 292 158 1698 183 13 7 chr17 41150460 41150766 -48353787 - AluJo SINE Alu -4 308 1 1345 136 0 126 chr17 41150766 41150876 -48353677 - AluJo SINE Alu -154 158 36 1094 148 21 160 chr17 41150882 41151029 -48353524 - L1M3 LINE L1 -561 5610 5444 2240 72 58 0 chr17 41151029 41151321 -48353232 - AluSp SINE Alu -4 309 1 1094 148 21 160 chr17 41151321 41151356 -48353197 - L1M3 LINE L1 -727 5444 5406 2344 88 0 3 chr17 41151356 41151652 -48352901 + AluSx SINE Alu 1 295 -17 1094 148 21 160 chr17 41151652 41151806 -48352747 - L1M3 LINE L1 -765 5406 5320 585 244 31 0 chr17 41151808 41151935 -48352618 - FLAM_A SINE Alu -7 135 5 381 101 58 0 chr17 41151939 41152008 -48352545 - L1M LINE L1 -2457 5328 5256 722 149 88 41 chr17 41152028 41152222 -48352331 - L1M4 LINE L1 -5458 1084 882 1337 176 64 22 chr17 41152257 41152395 -48352158 - AluJo SINE Alu -32 280 149 5252 67 17 31 chr17 41152395 41152464 -48352089 - LTR8 LTR ERV1 0 691 623 2521 52 0 10 chr17 41152464 41152773 -48351780 + AluY SINE Alu 1 306 -5 5252 67 17 31 chr17 41152773 41153404 -48351149 - LTR8 LTR ERV1 -68 623 1 1337 176 64 22 chr17 41153404 41153532 -48351021 - AluJo SINE Alu -163 149 3 2881 216 104 50 chr17 41153534 41154119 -48350434 - L1M4 LINE L1 -5650 892 340 2196 95 0 3 chr17 41154119 41154429 -48350124 - AluSg SINE Alu 0 309 1 2881 216 104 50 chr17 41154429 41154595 -48349958 - L1M4 LINE L1 -6202 340 184 1435 128 49 8 chr17 41154595 41154838 -48349715 - L1MA4A LINE L1 -11 6292 6040 2881 216 104 50 chr17 41154838 41154930 -48349623 - L1M4 LINE L1 -6358 184 1 2274 82 4 0 chr17 41155182 41155461 -48349092 + AluSc SINE Alu 1 280 -29 195 42 0 0 chr17 41155464 41155488 -48349065 + (GAAAA)n Simple_repeat Simple_repeat 3 26 0 1947 137 0 39 chr17 41155714 41156020 -48348533 - AluSx SINE Alu -18 294 1 2161 117 3 10 chr17 41156020 41156327 -48348226 - AluSq SINE Alu -8 305 1 2193 97 7 36 chr17 41157342 41157650 -48346903 + AluSq SINE Alu 1 299 -14 2483 72 3 0 chr17 41157724 41158028 -48346525 - AluSc SINE Alu -4 305 1 301 305 59 64 chr17 41158144 41158331 -48346222 + HAL1 LINE L1 154 339 -2168 1318 106 0 0 chr17 41158439 41158609 -48345944 + AluSg/x SINE Alu 132 301 -9 22 0 0 0 chr17 41158907 41158929 -48345624 + AT_rich Low_complexity Low_complexity 1 22 0 1965 114 53 0 chr17 41159049 41159330 -48345223 - AluSp SINE Alu -17 296 1 2768 16 0 29 chr17 41159446 41159762 -48344791 - AluY SINE Alu -4 307 1 1994 138 3 3 chr17 41159762 41160058 -48344495 - AluSx SINE Alu -16 296 1 776 206 0 61 chr17 41160140 41160320 -48344233 - FRAM SINE Alu -14 162 1 1295 205 61 4 chr17 41160333 41160611 -48343942 + AluJo SINE Alu 1 294 -18 1143 95 0 7 chr17 41160616 41160763 -48343790 + AluSg SINE Alu 1 146 -164 1787 109 24 0 chr17 41160763 41161010 -48343543 + AluSg SINE Alu 51 303 -7 189 352 16 32 chr17 41161013 41161138 -48343415 - L3 LINE CR1 -822 755 633 2274 102 0 0 chr17 41161315 41161618 -48342935 + AluY SINE Alu 4 306 -5 1904 157 0 10 chr17 41161867 41162160 -48342393 - AluJo SINE Alu -22 290 1 1687 132 13 72 chr17 41162189 41162493 -48342060 + AluSx SINE Alu 1 286 -26 24 85 0 0 chr17 41162493 41162552 -48342001 + AT_rich Low_complexity Low_complexity 1 59 0 1333 269 141 26 chr17 41162597 41162652 -48341901 + HAL1 LINE L1 1154 1201 -1306 2295 128 0 0 chr17 41162652 41162958 -48341595 + AluSx SINE Alu 3 308 -4 1333 269 141 26 chr17 41162958 41163084 -48341469 + HAL1 LINE L1 1201 1311 -1196 2284 100 3 3 chr17 41163084 41163384 -48341169 + AluY SINE Alu 1 300 -11 1333 269 141 26 chr17 41163384 41163923 -48340630 + HAL1 LINE L1 1311 1958 -549 644 196 196 0 chr17 41164126 41164269 -48340284 + FAM SINE Alu 1 171 -4 228 163 23 0 chr17 41165308 41165351 -48339202 - MLT1H LTR MaLR -15 580 537 900 227 32 106 chr17 41165413 41165634 -48338919 - MLT1H LTR MaLR -185 364 177 1744 172 13 3 chr17 41165634 41165936 -48338617 - AluJb SINE Alu -7 305 1 900 227 32 106 chr17 41165936 41166062 -48338491 - MLT1H LTR MaLR -372 177 43 2307 108 0 7 chr17 41166078 41166383 -48338170 + AluSx SINE Alu 3 305 -7 1697 177 23 16 chr17 41166426 41166736 -48337817 - AluJb SINE Alu 0 312 1 921 121 0 29 chr17 41166810 41166950 -48337603 + FLAM_C SINE Alu 1 136 -7 2083 81 7 48 chr17 41166953 41167275 -48337278 + AluSp SINE Alu 1 310 0 2143 108 14 10 chr17 41167349 41167645 -48336908 + AluSx SINE Alu 1 297 -15 1584 72 5 0 chr17 41167645 41167837 -48336716 + AluSp SINE Alu 1 194 -119 705 173 0 0 chr17 41167838 41167948 -48336605 - AluJo/FLAM SINE Alu -201 111 2 2370 76 0 20 chr17 41167958 41168261 -48336292 - AluY SINE Alu -14 297 1 701 176 0 8 chr17 41168332 41168451 -48336102 - FLAM_C SINE Alu -24 119 2 2333 93 0 0 chr17 41168461 41168751 -48335802 - AluY SINE Alu -21 290 1 608 257 43 11 chr17 41168944 41169168 -48335385 + MLT2E LTR ERVL 343 628 0 234 290 30 38 chr17 41169169 41169300 -48335253 + MST-int LTR MaLR 3 132 -1519 918 291 99 12 chr17 41169448 41169792 -48334761 - MLT2E LTR ERVL -254 374 1 1672 168 94 13 chr17 41169856 41170237 -48334316 - L1MB3 LINE L1 -9 6174 5763 * 2138 172 58 72 chr17 41170221 41170649 -48333904 - L1ME1 LINE L1 -237 5929 5496 1847 90 86 0 chr17 41170649 41170904 -48333649 - AluSq SINE Alu -16 297 21 2138 172 58 72 chr17 41170904 41170916 -48333637 - L1ME1 LINE L1 -670 5496 5485 1405 144 50 77 chr17 41170916 41171215 -48333338 - AluSx SINE Alu -21 291 1 2138 172 58 72 chr17 41171215 41171523 -48333030 - L1ME1 LINE L1 -681 5485 5180 2230 126 3 0 chr17 41171556 41171866 -48332687 - AluSx SINE Alu -1 311 1 2067 169 11 49 chr17 41171866 41172328 -48332225 + MLT2B2 LTR ERVL 15 514 -1 477 199 125 97 chr17 41172332 41172548 -48332005 + L1MCa LINE L1 1738 2033 -4467 780 163 39 13 chr17 41172559 41172712 -48331841 + FRAM SINE Alu 1 156 -20 1458 202 29 101 chr17 41172837 41172973 -48331580 + L1M4 LINE L1 4764 4908 -1238 2316 90 7 7 chr17 41172973 41173274 -48331279 - AluSp SINE Alu -12 301 1 1458 202 29 101 chr17 41173274 41173303 -48331250 + L1M4 LINE L1 4908 4938 -1208 1806 161 3 30 chr17 41173303 41173601 -48330952 + AluJb SINE Alu 1 290 -22 1762 199 0 0 chr17 41173611 41173902 -48330651 + AluJb SINE Alu 1 291 -21 1458 202 29 101 chr17 41173902 41174030 -48330523 + L1M4 LINE L1 4947 5083 -1063 2319 99 0 3 chr17 41174030 41174333 -48330220 - AluSg SINE Alu -8 302 1 1458 202 29 101 chr17 41174333 41174387 -48330166 + L1M4 LINE L1 5083 5139 -1007 2515 75 3 0 chr17 41174387 41174693 -48329860 - AluSq SINE Alu -6 307 1 1458 202 29 101 chr17 41174693 41174846 -48329707 + L1M4 LINE L1 5139 5241 -905 288 164 0 6 chr17 41174868 41174932 -48329621 + Alu SINE Alu 1 43 -260 456 154 13 0 chr17 41174932 41175010 -48329543 - AluJ/FLAM SINE Alu -221 91 13 2162 109 3 3 chr17 41175035 41175344 -48329209 + AluSq SINE Alu 1 309 0 21 0 0 0 chr17 41175517 41175538 -48329015 + AT_rich Low_complexity Low_complexity 1 21 0 290 306 27 18 chr17 41175661 41175772 -48328781 - L2 LINE L2 -12 3260 3149 309 252 209 7 chr17 41176047 41176186 -48328367 - MER104 DNA Tc2 0 180 14 766 110 15 52 chr17 41176189 41176325 -48328228 - L1MB2 LINE L1 -10 6161 6031 2271 89 0 11 chr17 41176343 41176667 -48327886 + AluSc SINE Alu 1 321 0 1550 154 140 0 chr17 41176672 41176965 -48327588 - MER44D DNA MER2_type -1 608 5 1106 278 98 12 chr17 41177033 41177440 -48327113 - MLT1J LTR MaLR -13 498 57 2114 132 10 3 chr17 41177556 41177866 -48326687 - AluSx SINE Alu 0 312 1 704 183 8 0 chr17 41177892 41178018 -48326535 - FLAM_A SINE Alu -6 127 1 2355 98 0 3 chr17 41178907 41179214 -48325339 - AluSq SINE Alu -7 306 1 582 229 10 90 chr17 41179318 41179519 -48325034 - MER5A DNA MER1_type -3 186 2 1963 128 37 0 chr17 41179750 41180048 -48324505 - AluSp SINE Alu -2 311 3 522 77 0 135 chr17 41180259 41180315 -48324238 - MER46B DNA MER2_type -2673 58 145 2564 57 0 0 chr17 41180315 41180612 -48323941 - AluY SINE Alu -14 297 1 522 77 0 135 chr17 41180612 41180659 -48323894 - MER46B DNA MER2_type -2585 146 94 741 253 6 0 chr17 41180659 41180825 -48323728 - AluJb SINE Alu -9 303 137 312 137 20 0 chr17 41180825 41180876 -48323677 + Tigger4(Zombi) DNA MER2_type 45 96 -2635 459 107 0 0 chr17 41180914 41180989 -48323564 - Alu SINE Alu -2 308 234 2278 120 0 0 chr17 41180989 41181297 -48323256 - AluSx SINE Alu -4 308 1 1520 180 19 0 chr17 41181297 41181553 -48323000 + AluJo SINE Alu 26 286 -26 202 320 13 13 chr17 41181598 41181676 -48322877 + L3 LINE CR1 1122 1199 -378 699 179 0 0 chr17 41181677 41181789 -48322764 + AluJo/FLAM SINE Alu 3 114 -198 2431 77 3 0 chr17 41181789 41182086 -48322467 - AluSc SINE Alu -11 298 1 333 26 0 0 chr17 41182109 41182147 -48322406 - MER4E LTR ERV1 -76 690 653 7568 37 5 1 chr17 41182280 41183571 -48320982 + L1PA5 LINE L1 4859 6151 -3 1594 161 3 64 chr17 41183916 41184227 -48320326 - AluJo SINE Alu -20 292 1 417 107 0 0 chr17 41184228 41184284 -48320269 - AluJb SINE Alu -167 145 90 262 330 33 0 chr17 41184290 41184381 -48320172 - L2 LINE L2 -19 3253 3160 2051 134 10 0 chr17 41184426 41184716 -48319837 + AluSq SINE Alu 1 293 -20 224 294 159 16 chr17 41184998 41185124 -48319429 + L2 LINE L2 3164 3307 -6 1901 150 0 19 chr17 41185449 41185763 -48318790 - AluSx SINE Alu -4 308 1 1052 195 0 10 chr17 41185900 41186105 -48318448 - AluJb SINE Alu -14 298 96 2176 124 0 3 chr17 41186105 41186404 -48318149 + AluSg1 SINE Alu 1 298 -11 1242 132 0 0 chr17 41186404 41186571 -48317982 + AluSg/x SINE Alu 134 300 -12 642 191 0 0 chr17 41186575 41186680 -48317873 - AluJ SINE Alu -205 107 3 248 266 202 0 chr17 41186708 41186802 -48317751 + MIR SINE MIR 122 234 -28 1797 156 0 56 chr17 41187365 41187534 -48317019 - AluJb SINE Alu -10 302 158 2410 70 0 7 chr17 41187534 41187833 -48316720 - AluY SINE Alu -14 297 1 1797 156 0 56 chr17 41187833 41187983 -48316570 - AluJb SINE Alu -154 158 1 255 310 103 9 chr17 41188173 41188289 -48316264 - L2 LINE L2 -592 2722 2596 291 297 0 0 chr17 41188571 41188645 -48315908 - MLT1I LTR MaLR -268 141 68 922 179 52 107 chr17 41189585 41189741 -48314812 - L1MC4a LINE L1 0 7808 7645 1912 93 48 48 chr17 41189741 41189872 -48314681 + AluSx SINE Alu 5 135 -177 2271 89 3 0 chr17 41189872 41190164 -48314389 + AluSg SINE Alu 1 293 -17 1912 93 48 48 chr17 41190164 41190322 -48314231 + AluSx SINE Alu 134 294 -18 2073 68 39 25 chr17 41190330 41190609 -48313944 + AluSc SINE Alu 10 292 -17 922 179 52 107 chr17 41190609 41190734 -48313819 - L1MC4a LINE L1 -170 7638 7534 983 234 10 0 chr17 41190808 41191005 -48313548 - AluJb SINE Alu -38 274 76 282 111 0 153 chr17 41191008 41191080 -48313473 - AluJo SINE Alu -159 143 83 2004 135 7 3 chr17 41191080 41191368 -48313185 - AluSx SINE Alu -9 303 15 1399 217 97 50 chr17 41191382 41191702 -48312851 - L1MC4a LINE L1 -319 7489 7185 7153 51 29 21 chr17 41191702 41193321 -48311232 - SVA Other Other -723 1386 1 1399 217 97 50 chr17 41193321 41193416 -48311137 - L1MC4a LINE L1 -623 7185 7096 2283 117 0 0 chr17 41193416 41193723 -48310830 - AluSg SINE Alu -3 307 1 1399 217 97 50 chr17 41193723 41193863 -48310690 - L1MC4a LINE L1 -712 7096 6906 195 42 0 0 chr17 41194125 41194149 -48310404 + (TCCCC)n Simple_repeat Simple_repeat 1 24 0 1135 185 122 20 chr17 41194154 41194408 -48310145 - AluJo SINE Alu -32 280 1 1506 87 5 5 chr17 41194659 41194855 -48309698 - AluSg/x SINE Alu -5 305 110 3672 87 6 2 chr17 41194863 41195348 -48309205 - LTR15 LTR ERV1 -6 487 1 833 108 0 0 chr17 41195348 41195459 -48309094 - AluYb8 SINE Alu -207 111 1 10419 69 17 8 chr17 41195774 41197093 -48307460 - SVA Other Other 0 1386 57 287 24 0 24 chr17 41197096 41197137 -48307416 + (GGGAGA)n Simple_repeat Simple_repeat 4 43 0 635 215 23 0 chr17 41197168 41197298 -48307255 + FLAM_A SINE Alu 1 133 0 1417 206 14 24 chr17 41197316 41197426 -48307127 - MER68 LTR ERV1 0 562 452 2445 79 3 0 chr17 41197426 41197730 -48306823 + AluY SINE Alu 1 305 -6 1417 206 14 24 chr17 41197730 41197906 -48306647 - MER68 LTR ERV1 -110 452 279 778 165 31 0 chr17 41197896 41198023 -48306530 - MER68 LTR ERV1 -431 131 1 * 226 224 0 20 chr17 41198155 41198204 -48306349 + MIR SINE MIR 8 55 -207 358 217 0 0 chr17 41198315 41198384 -48306169 + MLT1A1 LTR MaLR 293 361 -4 393 318 91 48 chr17 41198585 41198837 -48305716 - L2 LINE L2 -13 3259 2997 357 123 0 77 chr17 41198837 41198866 -48305687 + AluJb SINE Alu 109 132 -170 1936 153 20 0 chr17 41198866 41199166 -48305387 + AluSx SINE Alu 1 306 -6 357 123 0 77 chr17 41199166 41199201 -48305352 + AluJb SINE Alu 132 168 -134 2177 122 0 3 chr17 41199647 41199935 -48304618 - AluSx SINE Alu -25 287 1 2212 115 3 16 chr17 41199940 41200252 -48304301 - AluSx SINE Alu 0 312 5 1780 184 14 3 chr17 41200258 41200551 -48304002 - AluJo SINE Alu -16 296 1 4158 195 57 75 chr17 41200564 41201202 -48303351 - L1MC4 LINE L1 -141 7901 7253 1525 194 14 7 chr17 41201202 41201496 -48303057 - AluJo SINE Alu -16 296 1 4158 195 57 75 chr17 41201496 41201990 -48302563 - L1MC4 LINE L1 -789 7253 6790 2493 77 3 3 chr17 41201990 41202301 -48302252 - AluSq SINE Alu -2 311 1 4158 195 57 75 chr17 41202301 41202395 -48302158 - L1MC4 LINE L1 -1252 6790 6696 1374 90 0 0 chr17 41202399 41202576 -48301977 + AluY SINE Alu 133 309 -2 729 219 153 29 chr17 41202748 41203019 -48301534 - L1MD3 LINE L1 -1223 6585 6296 250 309 0 0 chr17 41203026 41203081 -48301472 + AluJo SINE Alu 1 55 -247 2043 142 3 16 chr17 41203081 41203384 -48301169 + AluSx SINE Alu 1 299 -13 1498 156 0 39 chr17 41203384 41203638 -48300915 + AluJo SINE Alu 44 289 -23 1329 171 0 9 chr17 41203638 41203860 -48300693 - AluJb SINE Alu -23 289 70 2233 169 54 10 chr17 41203987 41204395 -48300158 - MSTB LTR MaLR 0 426 1 792 252 192 9 chr17 41204425 41204742 -48299811 - L1ME LINE L1 -5520 550 176 541 279 29 0 chr17 41204747 41204883 -48299670 - L1ME LINE L1 -5925 145 6 334 231 33 50 chr17 41204888 41205009 -48299544 - L1MC4a LINE L1 -1639 6169 6051 1757 162 14 14 chr17 41205055 41205345 -48299208 - AluJb SINE Alu -22 290 1 2153 99 20 7 chr17 41205683 41205976 -48298577 + AluSx SINE Alu 1 297 -15 471 245 49 28 chr17 41205976 41206119 -48298434 - MER5A DNA MER1_type -32 157 12 2204 62 26 49 chr17 41206188 41206493 -48298060 + AluSg SINE Alu 1 298 -12 2491 71 3 0 chr17 41206998 41207295 -48297258 + AluY SINE Alu 1 298 -13 1394 91 0 0 chr17 41207295 41207471 -48297082 + AluY SINE Alu 133 308 -3 33 0 0 0 chr17 41207762 41207795 -48296758 + AT_rich Low_complexity Low_complexity 1 33 0 581 168 134 17 chr17 41208088 41208207 -48296346 - FLAM_C SINE Alu 0 133 1 2448 94 0 7 chr17 41208463 41208771 -48295782 - AluSq SINE Alu -7 306 1 2065 111 3 44 chr17 41208780 41209095 -48295458 - AluSg SINE Alu -8 302 1 1815 167 31 3 chr17 41209380 41209674 -48294879 + AluSq SINE Alu 1 302 -11 21 0 0 0 chr17 41209972 41209993 -48294560 + AT_rich Low_complexity Low_complexity 1 21 0 731 167 14 29 chr17 41210356 41210494 -48294059 + FLAM_C SINE Alu 2 137 -6 2081 113 38 0 chr17 41210570 41210862 -48293691 - AluSg SINE Alu -7 303 1 2224 104 3 0 chr17 41211009 41211298 -48293255 - AluSg SINE Alu -20 290 1 2216 93 3 10 chr17 41211496 41211808 -48292745 - AluSp SINE Alu 0 313 1 232 100 0 0 chr17 41211815 41211855 -48292698 - L1MB3 LINE L1 0 6183 6144 233 260 96 0 chr17 41212071 41212144 -48292409 - L1MC5 LINE L1 -62 7899 7820 2532 61 3 0 chr17 41212267 41212577 -48291976 + AluY SINE Alu 1 311 0 344 284 61 72 chr17 41212622 41212737 -48291816 - L1M4 LINE L1 -1300 4846 4731 2130 114 0 0 chr17 41212737 41213018 -48291535 + AluSg SINE Alu 1 281 -29 344 284 61 72 chr17 41213018 41213264 -48291289 - L1M4 LINE L1 -1415 4731 4489 2046 101 0 20 chr17 41213265 41213563 -48290990 - AluSx SINE Alu -20 292 1 2088 228 98 20 chr17 41213586 41213951 -48290602 - L1MC4 LINE L1 -962 7080 6656 201 74 0 0 chr17 41213951 41213978 -48290575 + (TG)n Simple_repeat Simple_repeat 2 28 0 2088 228 98 20 chr17 41213978 41214161 -48290392 - L1MC4 LINE L1 -1386 6656 6489 728 248 26 0 chr17 41214169 41214322 -48290231 - FRAM SINE Alu -16 160 4 519 31 0 0 chr17 41214395 41214460 -48290093 + (TC)n Simple_repeat Simple_repeat 1 65 0 180 0 0 0 chr17 41214853 41214873 -48289680 + (TA)n Simple_repeat Simple_repeat 1 20 0 744 138 109 0 chr17 41214936 41215075 -48289478 + L1MB7 LINE L1 5357 5511 -667 709 84 0 0 chr17 41215075 41215170 -48289383 + AluSq/x SINE Alu 42 136 -176 2276 111 3 7 chr17 41215170 41215476 -48289077 + AluSx SINE Alu 1 305 -7 527 186 0 93 chr17 41215476 41215605 -48288948 + L1MB7 LINE L1 5506 5622 -552 1671 149 16 58 chr17 41215606 41215915 -48288638 + AluSx SINE Alu 1 296 -16 2012 152 77 12 chr17 41215916 41216318 -48288235 + L1MB7 LINE L1 5715 6142 -42 2351 99 3 0 chr17 41216332 41216635 -48287918 + AluSp SINE Alu 1 304 -9 2238 112 3 6 chr17 41216734 41217047 -48287506 + AluSx SINE Alu 1 312 0 2258 111 0 0 chr17 41217050 41217348 -48287205 + AluSg SINE Alu 1 298 -12 2410 72 3 13 chr17 41217391 41217698 -48286855 + AluY SINE Alu 1 304 -7 2217 103 3 0 chr17 41217840 41218132 -48286421 - AluSg SINE Alu -17 293 1 480 145 63 138 chr17 41219017 41219078 -48285475 - LTR45B LTR ERV1 0 489 425 1706 168 7 32 chr17 41219078 41219253 -48285300 - AluJo SINE Alu -6 306 141 2216 116 3 10 chr17 41219253 41219563 -48284990 - AluSx SINE Alu -4 308 1 1706 168 7 32 chr17 41219563 41219696 -48284857 - AluJo SINE Alu -171 141 6 480 145 63 138 chr17 41219696 41219793 -48284760 - LTR45B LTR ERV1 -64 425 343 1694 148 29 35 chr17 41220089 41220400 -48284153 - AluJb SINE Alu -3 309 1 1758 115 43 0 chr17 41220408 41220699 -48283854 - AluSx SINE Alu 0 349 48 337 123 15 15 chr17 41220699 41220764 -48283789 + AluSp/q SINE Alu 239 303 0 1673 152 68 13 chr17 41220940 41221250 -48283303 - LTR49-int LTR ERV1 -651 5680 5354 573 115 13 0 chr17 41221250 41221328 -48283225 + AluSg/x SINE Alu 115 193 -119 25 53 0 18 chr17 41221380 41221402 -48283151 + AT_rich Low_complexity Low_complexity 1 22 -34 2303 95 0 3 chr17 41221402 41221698 -48282855 + AluY SINE Alu 1 295 -16 25 53 0 18 chr17 41221698 41221732 -48282821 + AT_rich Low_complexity Low_complexity 22 56 0 1360 192 0 88 chr17 41221755 41221989 -48282564 - AluJo SINE Alu -13 299 101 854 158 0 0 chr17 41221989 41222122 -48282431 + FLAM_C SINE Alu 1 133 0 1360 192 0 88 chr17 41222122 41222215 -48282338 - AluJo SINE Alu -211 101 1 2228 119 0 3 chr17 41222277 41222579 -48281974 - AluSx SINE Alu -11 301 1 480 229 15 46 chr17 41222621 41222752 -48281801 + MIR SINE MIR 120 246 -16 364 273 150 20 chr17 41222818 41223115 -48281438 + L2 LINE L2 2938 3267 -5 857 197 15 6 chr17 41223600 41223941 -48280612 + L1M4 LINE L1 4741 5165 -981 1115 114 0 18 chr17 41223948 41224115 -48280438 + AluSg/x SINE Alu 136 299 -13 1346 223 11 15 chr17 41224115 41224251 -48280302 - AluJo SINE Alu -40 272 137 2256 109 3 6 chr17 41224251 41224563 -48279990 - AluSq SINE Alu -2 311 1 1346 223 11 15 chr17 41224563 41224699 -48279854 - AluJo SINE Alu -175 137 1 717 199 0 8 chr17 41224710 41224841 -48279712 - FLAM_C SINE Alu 0 133 4 1666 139 96 4 chr17 41225209 41225489 -48279064 + AluSx SINE Alu 1 306 -6 993 186 29 6 chr17 41225497 41225669 -48278884 + AluJb SINE Alu 118 293 -19 1709 178 3 13 chr17 41225679 41225983 -48278570 + AluJo SINE Alu 3 303 -9 1681 180 39 0 chr17 41226291 41226574 -48277979 + AluJb SINE Alu 1 294 -18 662 61 0 0 chr17 41227268 41227350 -48277203 + AluY SINE Alu 213 294 -17 1536 194 10 14 chr17 41227457 41227594 -48276959 + AluJb SINE Alu 1 137 -175 2456 77 0 0 chr17 41227594 41227892 -48276661 + AluY SINE Alu 1 298 -13 1536 194 10 14 chr17 41227892 41228043 -48276510 + AluJb SINE Alu 137 288 -24 1493 154 32 83 chr17 41228365 41228540 -48276013 - AluJo SINE Alu -16 296 142 2378 82 0 0 chr17 41228540 41228821 -48275732 - AluSx SINE Alu -31 281 1 1493 154 32 83 chr17 41228821 41228957 -48275596 - AluJo SINE Alu -170 142 1 619 113 0 0 chr17 41229952 41230032 -48274521 + AluS SINE Alu 11 90 -222 2130 133 3 0 chr17 41230150 41230451 -48274102 - AluSx SINE Alu -10 302 1 2345 67 0 7 chr17 41230456 41230767 -48273786 - AluY SINE Alu 0 309 1 21 0 0 0 chr17 41231515 41231536 -48273017 + AT_rich Low_complexity Low_complexity 1 21 0 1692 180 24 7 chr17 41231536 41231830 -48272723 - AluJo SINE Alu -13 299 1 1408 177 21 43 chr17 41231870 41232152 -48272401 + AluJb SINE Alu 25 300 -12 32 0 0 0 chr17 41232161 41232193 -48272360 + AT_rich Low_complexity Low_complexity 1 32 0 2132 137 0 3 chr17 41232230 41232523 -48272030 + AluSx SINE Alu 1 292 -20 350 217 0 0 chr17 41232527 41232587 -48271966 + AluJ/FLAM SINE Alu 1 60 -242 409 223 57 109 chr17 41232589 41232764 -48271789 - MER21B LTR ERV1 -425 438 273 537 104 13 0 chr17 41232779 41232856 -48271697 - MADE1 DNA Mariner 0 80 3 398 240 31 31 chr17 41232862 41232958 -48271595 - MER21B LTR ERV1 -767 96 1 23 33 0 0 chr17 41232988 41233018 -48271535 + AT_rich Low_complexity Low_complexity 1 30 0 2459 81 0 0 chr17 41233679 41233988 -48270565 - AluY SINE Alu -2 309 1 475 250 247 30 chr17 41234221 41234460 -48270093 + L1MC4a LINE L1 5643 5829 -1979 198 0 0 0 chr17 41234460 41234482 -48270071 + (TA)n Simple_repeat Simple_repeat 2 23 0 475 250 247 30 chr17 41234482 41234570 -48269983 + L1MC4a LINE L1 5829 6041 -1767 1858 143 43 0 chr17 41234712 41234992 -48269561 + AluSx SINE Alu 1 292 -20 841 181 66 72 chr17 41235050 41235286 -48269267 - L1MC5 LINE L1 -36 7925 7690 1518 119 171 8 chr17 41235286 41235537 -48269016 - AluSg SINE Alu -8 292 1 841 181 66 72 chr17 41235537 41235620 -48268933 - L1MC5 LINE L1 -271 7690 7608 1549 152 65 35 chr17 41235700 41235990 -48268563 + AluJb SINE Alu 1 299 -13 818 171 0 0 chr17 41235993 41236122 -48268431 + FLAM_C SINE Alu 2 130 -3 715 304 100 66 chr17 41236129 41236744 -48267809 + L1M4 LINE L1 35 628 -5768 2398 94 0 3 chr17 41236744 41237041 -48267512 + AluSx SINE Alu 1 296 -16 715 304 100 66 chr17 41237041 41237174 -48267379 + L1M4 LINE L1 628 755 -5641 2458 76 0 7 chr17 41237174 41237475 -48267078 + AluSx SINE Alu 1 299 -13 715 304 100 66 chr17 41237475 41237545 -48267008 + L1M4 LINE L1 755 882 -5514 600 110 40 20 chr17 41237548 41237648 -48266905 + AluSp/q SINE Alu 204 305 -8 935 191 12 0 chr17 41237709 41237871 -48266682 + FAM SINE Alu 1 164 -11 237 235 87 17 chr17 41237937 41238052 -48266501 + L1M4 LINE L1 2339 2461 -3754 1393 244 46 87 chr17 41238074 41238532 -48266021 + L1M4 LINE L1 2639 3115 -3100 2235 127 0 3 chr17 41238532 41238840 -48265713 + AluSx SINE Alu 1 307 -5 1393 244 46 87 chr17 41238840 41239007 -48265546 + L1M4 LINE L1 3115 3233 -2982 2495 54 3 0 chr17 41239007 41239302 -48265251 + AluY SINE Alu 1 296 -15 1393 244 46 87 chr17 41239302 41239396 -48265157 + L1M4 LINE L1 3233 3329 -2886 1779 181 7 0 chr17 41239404 41239692 -48264861 + AluJo SINE Alu 1 290 -22 1091 270 56 74 chr17 41239716 41240238 -48264315 + L1M4 LINE L1 4051 4581 -1634 2271 114 0 13 chr17 41240238 41240554 -48263999 - AluSx SINE Alu 0 312 1 1091 270 56 74 chr17 41240554 41240597 -48263956 + L1M4 LINE L1 4581 4623 -1592 1600 177 41 10 chr17 41240597 41240891 -48263662 - AluJb SINE Alu -9 303 1 1091 270 56 74 chr17 41240891 41241201 -48263352 + L1M4 LINE L1 4623 4911 -1304 264 194 16 0 chr17 41241202 41241264 -48263289 + L1M4 LINE L1 5181 5243 -972 2129 111 17 3 chr17 41241265 41241553 -48263000 + AluSg SINE Alu 2 293 -17 22 0 0 0 chr17 41241622 41241644 -48262909 + AT_rich Low_complexity Low_complexity 1 22 0 440 286 0 50 chr17 41241652 41241792 -48262761 + FLAM_A SINE Alu 1 133 0 1820 214 29 10 chr17 41241792 41241999 -48262554 + L1M4 LINE L1 5257 5459 -788 2133 107 20 20 chr17 41241999 41242298 -48262255 + AluSx SINE Alu 3 301 -11 1820 214 29 10 chr17 41242298 41242562 -48261991 + L1M4 LINE L1 5459 5736 -511 1697 182 26 16 chr17 41242562 41242869 -48261684 + AluJo SINE Alu 1 310 -2 1820 214 29 10 chr17 41242869 41242890 -48261663 + L1M4 LINE L1 5736 5755 -492 451 204 128 111 chr17 41242882 41243056 -48261497 + L1MC5 LINE L1 7510 7679 -282 * 2409 88 0 3 chr17 41243056 41243361 -48261192 + AluSg SINE Alu 1 304 -6 451 204 128 111 chr17 41243361 41243458 -48261095 + L1MC5 LINE L1 7679 7773 -188 1983 102 4 0 chr17 41243458 41243712 -48260841 - AluSq SINE Alu -20 293 39 451 204 128 111 chr17 41243712 41243752 -48260801 + L1MC5 LINE L1 7773 7811 -150 1817 161 10 3 chr17 41243752 41244043 -48260510 + AluSx SINE Alu 1 293 -19 451 204 128 111 chr17 41244043 41244126 -48260427 + L1MC5 LINE L1 7811 7913 -48 25 51 0 0 chr17 41244822 41244861 -48259692 + AT_rich Low_complexity Low_complexity 1 39 0 1647 139 121 4 chr17 41245063 41245336 -48259217 + AluSg1 SINE Alu 1 305 -4 280 281 0 24 chr17 41245469 41245551 -48259002 + MER116 DNA Mariner 1 80 0 1983 142 0 10 chr17 41245583 41245878 -48258675 + AluJo SINE Alu 1 292 -20 908 144 0 0 chr17 41246699 41246838 -48257715 + AluJb SINE Alu 169 307 -5 1045 157 92 5 chr17 41246838 41247023 -48257530 + MER46A DNA MER2_type 34 234 -2 1896 168 3 0 chr17 41249203 41249495 -48255058 + AluJb SINE Alu 1 293 -19 709 181 62 28 chr17 41249664 41249839 -48254714 - AluSg/x SINE Alu 0 314 135 2175 109 3 10 chr17 41249841 41250007 -48254546 - AluSx SINE Alu -12 300 135 1674 86 0 14 chr17 41250007 41250228 -48254325 - AluSg/x SINE Alu -11 299 82 2175 109 3 10 chr17 41250228 41250355 -48254198 - AluSx SINE Alu -177 135 9 1696 167 25 7 chr17 41250365 41250647 -48253906 - AluJb SINE Alu -25 287 1 1775 160 7 10 chr17 41250747 41251035 -48253518 - AluJo SINE Alu -15 297 11 2003 103 37 0 chr17 41251098 41251390 -48253163 - AluSx SINE Alu 0 302 1 2314 106 0 3 chr17 41251417 41251718 -48252835 + AluSx SINE Alu 1 300 -12 2012 124 0 0 chr17 41251841 41252114 -48252439 + AluSx SINE Alu 21 293 -19 214 192 13 39 chr17 41252141 41252219 -48252334 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 2204 121 13 3 chr17 41252485 41252790 -48251763 - AluSp SINE Alu -5 308 1 625 183 0 56 chr17 41253319 41253445 -48251108 - FLAM_A SINE Alu -9 133 15 396 58 0 0 chr17 41253560 41253612 -48250941 + Alu SINE Alu 1 52 -251 2146 80 0 0 chr17 41253612 41253876 -48250677 - AluSg SINE Alu -46 264 1 441 134 8 55 chr17 41253883 41254010 -48250543 + (TTCC)n Simple_repeat Simple_repeat 1 121 0 1699 140 104 0 chr17 41254021 41254300 -48250253 - AluSx SINE Alu -4 308 1 1921 121 29 21 chr17 41254555 41254863 -48249690 + AluSx SINE Alu 1 310 0 515 179 236 0 chr17 41255781 41255887 -48248666 - FLAM_C SINE Alu -11 132 2 502 188 0 21 chr17 41255923 41256019 -48248534 - AluJo SINE Alu -92 220 127 1816 165 0 3 chr17 41256090 41256375 -48248178 + AluJo SINE Alu 1 284 -28 556 230 58 52 chr17 41256380 41256429 -48248124 - MIR SINE MIR -63 199 152 2290 89 21 0 chr17 41256429 41256720 -48247833 - AluSg SINE Alu -13 297 1 556 230 58 52 chr17 41256720 41256844 -48247709 - MIR SINE MIR -110 152 25 1911 118 89 0 chr17 41256950 41257230 -48247323 + AluSx SINE Alu 1 305 -7 1940 148 30 10 chr17 41257532 41257837 -48246716 - AluSx SINE Alu -1 311 1 2224 100 0 3 chr17 41257861 41258152 -48246401 - AluSc SINE Alu -17 292 3 813 143 0 16 chr17 41258166 41258292 -48246261 - FLAM_C SINE Alu -9 124 1 2548 71 0 0 chr17 41258634 41258942 -48245611 - AluSx SINE Alu -4 308 1 2241 108 0 10 chr17 41259696 41259992 -48244561 - AluSx SINE Alu -15 297 5 22 56 0 0 chr17 41260195 41260231 -48244322 + AT_rich Low_complexity Low_complexity 1 36 0 1702 160 48 34 chr17 41260344 41260460 -48244093 + AluJo SINE Alu 3 116 -196 2362 88 10 0 chr17 41260460 41260765 -48243788 + AluSp SINE Alu 1 308 -5 2573 62 0 3 chr17 41260765 41261072 -48243481 + AluY SINE Alu 1 306 -5 1702 160 48 34 chr17 41261072 41261248 -48243305 + AluJo SINE Alu 115 300 -12 2109 125 0 10 chr17 41261872 41262177 -48242376 - AluSq SINE Alu 0 313 12 230 150 0 25 chr17 41262902 41262942 -48241611 - Alu SINE Alu -12 290 252 498 214 32 24 chr17 41262972 41263009 -48241544 - FLAM_A SINE Alu -174 137 102 2114 108 7 0 chr17 41263009 41263287 -48241266 - AluSx SINE Alu -32 280 1 498 214 32 24 chr17 41263287 41263375 -48241178 - FLAM_A SINE Alu -209 102 11 1846 114 100 7 chr17 41263611 41263740 -48240813 + AluSx SINE Alu 1 117 -195 2253 120 7 0 chr17 41263740 41264041 -48240512 + AluSx SINE Alu 3 305 -7 1846 114 100 7 chr17 41264041 41264192 -48240361 + AluSx SINE Alu 117 307 -5 1180 195 17 30 chr17 41264220 41264456 -48240097 + AluJo SINE Alu 9 241 -71 1351 138 48 82 chr17 41264472 41264741 -48239812 + AluJo SINE Alu 37 296 -16 1647 151 6 63 chr17 41266547 41266729 -48237824 - AluJo SINE Alu -13 299 141 1754 166 7 3 chr17 41266729 41267025 -48237528 - AluJb SINE Alu -15 297 1 1647 151 6 63 chr17 41267025 41267159 -48237394 - AluJo SINE Alu -171 141 1 2412 79 0 13 chr17 41267237 41267541 -48237012 - AluY SINE Alu -11 300 1 1920 113 4 0 chr17 41267677 41267933 -48236620 + AluSq SINE Alu 1 257 -56 412 86 17 0 chr17 41268033 41268091 -48236462 + AluSq SINE Alu 233 291 -22 728 47 0 0 chr17 41268367 41268453 -48236100 + AluSq/x SINE Alu 54 139 -174 1122 54 0 0 chr17 41268453 41268582 -48235971 - AluY SINE Alu -182 129 1 29 60 0 0 chr17 41269746 41269796 -48234757 + AT_rich Low_complexity Low_complexity 1 50 0 2307 102 10 3 chr17 41270376 41270681 -48233872 - AluSx SINE Alu -5 307 1 799 134 0 0 chr17 41271046 41271200 -48233353 - FLAM_A SINE Alu 0 154 1 26 30 0 0 chr17 41271326 41271359 -48233194 + AT_rich Low_complexity Low_complexity 1 33 0 1939 98 8 0 chr17 41273151 41273407 -48231146 + AluSg1 SINE Alu 51 308 -1 2189 141 0 0 chr17 41274038 41274344 -48230209 - AluSx SINE Alu -6 306 1 2054 90 61 0 chr17 41274543 41274821 -48229732 - AluSp SINE Alu -18 295 1 2249 68 7 0 chr17 41274946 41275225 -48229328 - AluY SINE Alu -30 281 1 1605 132 48 58 chr17 41275303 41275598 -48228955 - AluJo SINE Alu -20 292 1 279 243 29 0 chr17 41276113 41276183 -48228370 + L2 LINE L2 3241 3312 -1 220 234 64 32 chr17 41276230 41276324 -48228229 + MIR SINE MIR 33 129 -79 363 23 0 0 chr17 41276382 41276426 -48228127 + (CA)n Simple_repeat Simple_repeat 2 45 0 2307 81 37 7 chr17 41276510 41276808 -48227745 + AluSq SINE Alu 5 311 -2 1156 161 0 0 chr17 41327030 41327210 -48177343 - AluJb SINE Alu -121 191 12 23 0 0 0 chr17 41327220 41327243 -48177310 + AT_rich Low_complexity Low_complexity 1 23 0 2107 135 10 0 chr17 41327246 41327550 -48177003 - AluSq SINE Alu -6 307 1 1836 158 3 7 chr17 41327552 41327855 -48176698 - AluSp SINE Alu -10 303 2 897 128 0 0 chr17 41327859 41327992 -48176561 - FLAM_C SINE Alu 0 133 1 200 231 0 0 chr17 41328072 41328111 -48176442 - MIR SINE MIR -8 254 216 2160 123 20 0 chr17 41329383 41329685 -48174868 + AluSx SINE Alu 1 308 -4 2056 57 21 39 chr17 41329687 41329970 -48174583 + AluY SINE Alu 23 300 -11 287 257 14 14 chr17 41330284 41330358 -48174195 - AluSp SINE Alu -101 202 129 277 297 8 8 chr17 41330411 41330539 -48174014 - FLAM_C SINE Alu -5 128 1 1470 141 0 55 chr17 41331241 41331419 -48173134 - AluSq SINE Alu -14 299 144 2154 93 6 22 chr17 41331419 41331732 -48172821 - AluSx SINE Alu -4 308 1 1470 141 0 55 chr17 41331732 41331865 -48172688 - AluSq SINE Alu -169 144 5 1987 107 0 0 chr17 41332297 41332569 -48171984 + AluSc SINE Alu 5 276 -33 23 62 0 0 chr17 41333536 41333568 -48170985 + GC_rich Low_complexity Low_complexity 1 32 0 1406 148 0 47 chr17 41335345 41335662 -48168891 + AluSq SINE Alu 1 302 -11 29 0 0 0 chr17 41335740 41335769 -48168784 + AT_rich Low_complexity Low_complexity 1 29 0 1692 128 6 44 chr17 41335769 41336089 -48168464 + AluSx SINE Alu 3 310 -2 1662 95 3 88 chr17 41336091 41336234 -48168319 + AluSx SINE Alu 1 108 -204 1964 91 18 7 chr17 41336234 41336519 -48168034 + AluSg SINE Alu 1 288 -22 1662 95 3 88 chr17 41336519 41336671 -48167882 + AluSx SINE Alu 108 271 -41 401 151 0 27 chr17 41336732 41336805 -48167748 - AluS SINE Alu -240 72 2 26 0 0 0 chr17 41336812 41336838 -48167715 + AT_rich Low_complexity Low_complexity 1 26 0 198 103 0 0 chr17 41336843 41336872 -48167681 + (TA)n Simple_repeat Simple_repeat 1 29 0 1461 194 7 33 chr17 41336872 41337176 -48167377 - AluJo SINE Alu -5 297 2 244 241 0 0 chr17 41337975 41338033 -48166520 + T-rich Low_complexity Low_complexity 1 58 0 1021 256 13 4 chr17 41338369 41338603 -48165950 + MER8 DNA MER2_type 1 236 -3 1367 146 47 53 chr17 41338729 41339030 -48165523 - AluSc SINE Alu -10 299 1 277 219 31 16 chr17 41339106 41339170 -48165383 - MER81 DNA DNA 0 114 50 612 186 0 0 chr17 41339572 41339674 -48164879 + AluSg/x SINE Alu 190 291 -19 1926 101 18 4 chr17 41339681 41339958 -48164595 - AluSx SINE Alu -31 281 1 213 352 62 22 chr17 41340630 41340809 -48163744 - L2 LINE L2 -788 2526 2341 256 170 21 21 chr17 41341185 41341232 -48163321 + Alu SINE Alu 1 47 -254 406 214 0 10 chr17 41341334 41341432 -48163121 + AluSg/x SINE Alu 200 296 -13 2354 77 0 3 chr17 41341432 41341744 -48162809 + AluY SINE Alu 1 311 0 1259 97 115 52 chr17 41341925 41342213 -48162340 + AluSg SINE Alu 2 307 -3 1257 215 35 0 chr17 41342363 41342647 -48161906 + AluJo SINE Alu 1 294 -8 2000 129 3 3 chr17 41342892 41343187 -48161366 - AluSc SINE Alu -14 295 1 1200 164 30 50 chr17 41343192 41343490 -48161063 - AluJb SINE Alu -20 292 1 960 142 6 27 chr17 41343528 41343711 -48160842 - AluSg/x SINE Alu -14 298 120 219 241 19 19 chr17 41343736 41343790 -48160763 + MER5B DNA MER1_type 125 178 0 1094 171 8 159 chr17 41344053 41344199 -48160354 + AluJo SINE Alu 3 169 -133 1900 108 42 7 chr17 41344199 41344485 -48160068 + AluSg SINE Alu 1 296 -14 1576 150 51 11 chr17 41344491 41344622 -48159931 + AluSx SINE Alu 4 128 -184 1855 134 38 0 chr17 41344622 41344913 -48159640 + AluSx SINE Alu 1 302 -10 1576 150 51 11 chr17 41344913 41345054 -48159499 + AluSx SINE Alu 128 287 -25 1094 171 8 159 chr17 41345054 41345252 -48159301 + AluJo SINE Alu 174 301 -1 1119 189 8 42 chr17 41345769 41346034 -48158519 - AluJb SINE Alu -17 295 40 1607 164 23 23 chr17 41346107 41346412 -48158141 + AluSx SINE Alu 1 305 -7 658 154 0 0 chr17 41346475 41346579 -48157974 - FRAM SINE Alu -18 158 55 228 250 0 0 chr17 41346909 41346969 -48157584 + A-rich Low_complexity Low_complexity 1 60 0 270 0 0 0 chr17 41347178 41347208 -48157345 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 2185 76 14 0 chr17 41347213 41347490 -48157063 - AluSc SINE Alu -27 282 2 1930 109 6 26 chr17 41348112 41348425 -48156128 - AluSx SINE Alu -5 307 1 21 0 0 0 chr17 41348428 41348449 -48156104 + AT_rich Low_complexity Low_complexity 1 21 0 2256 98 3 0 chr17 41348698 41349005 -48155548 - AluSp SINE Alu -4 309 2 1866 108 3 59 chr17 41349015 41349357 -48155196 - AluSc SINE Alu 0 309 1 518 248 0 31 chr17 41351855 41351984 -48152569 - L2 LINE L2 0 3272 3148 192 326 58 0 chr17 41352082 41352168 -48152385 - L2 LINE L2 -1182 2132 2042 203 297 62 0 chr17 41352917 41352981 -48151572 + L2 LINE L2 3191 3258 -55 2035 121 17 0 chr17 41353033 41353500 -48151053 + AluSx SINE Alu 6 477 0 180 0 0 0 chr17 41353500 41353520 -48151033 + (GGAA)n Simple_repeat Simple_repeat 1 20 0 2390 168 47 7 chr17 41354403 41354867 -48149686 + L1MB3 LINE L1 5698 6180 -3 1818 116 0 23 chr17 41354887 41355188 -48149365 + AluSg SINE Alu 9 302 -8 1956 136 0 3 chr17 41355213 41355515 -48149038 + AluSx SINE Alu 1 301 -11 2084 108 0 7 chr17 41355709 41356015 -48148538 + AluSc SINE Alu 1 304 -5 714 130 17 0 chr17 41356026 41356141 -48148412 + AluSp SINE Alu 9 125 -188 1567 110 9 0 chr17 41356241 41356468 -48148085 - AluSx SINE Alu -83 229 1 1974 114 0 13 chr17 41356553 41356861 -48147692 - AluSg SINE Alu -6 304 1 2080 91 7 14 chr17 41357586 41357883 -48146670 - AluSq SINE Alu -18 295 1 707 187 8 22 chr17 41357920 41357938 -48146615 - AluJb SINE Alu -179 133 116 1728 140 4 0 chr17 41357938 41358217 -48146336 - AluY SINE Alu -31 280 1 707 187 8 22 chr17 41358217 41358332 -48146221 - AluJb SINE Alu -196 116 2 2123 110 0 0 chr17 41358339 41358638 -48145915 - AluSg SINE Alu -11 299 1 1556 158 3 23 chr17 41358707 41359010 -48145543 - AluSx SINE Alu -15 297 1 645 141 20 0 chr17 41359189 41359288 -48145265 - U6 snRNA snRNA -5 102 2 1528 175 3 29 chr17 41359298 41359606 -48144947 - AluSx SINE Alu -9 303 4 2194 103 0 0 chr17 41359617 41359917 -48144636 - AluSx SINE Alu -8 304 5 1457 207 7 3 chr17 41359968 41360272 -48144281 - AluJb SINE Alu -7 305 1 297 68 0 0 chr17 41360398 41360442 -48144111 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 430 154 13 13 chr17 41360450 41360528 -48144025 - AluSc SINE Alu -230 79 2 521 151 27 75 chr17 41360708 41360854 -48143699 - AluSq/x SINE Alu -163 149 11 1397 149 24 31 chr17 41361572 41361861 -48142692 + AluSc SINE Alu 4 290 -9 206 170 43 0 chr17 41364984 41365031 -48139522 + CT-rich Low_complexity Low_complexity 4 52 0 232 231 19 0 chr17 41365459 41365511 -48139042 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 271 381 54 18 chr17 41368645 41368813 -48135740 - MIR SINE MIR -55 207 34 2082 106 0 3 chr17 41369065 41369348 -48135205 + AluSq SINE Alu 1 282 -31 297 0 0 0 chr17 41369353 41369386 -48135167 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2194 64 7 7 chr17 41369386 41369695 -48134858 + AluY SINE Alu 1 309 0 224 192 58 0 chr17 41370988 41371040 -48133513 + CT-rich Low_complexity Low_complexity 2 56 0 211 262 0 0 chr17 41371238 41371280 -48133273 + G-rich Low_complexity Low_complexity 2 43 0 243 286 0 0 chr17 41371347 41371410 -48133143 + GA-rich Low_complexity Low_complexity 2 64 0 198 118 0 0 chr17 41371584 41371618 -48132935 + (TG)n Simple_repeat Simple_repeat 1 34 0 339 222 0 0 chr17 41371879 41371960 -48132593 + A-rich Low_complexity Low_complexity 1 81 0 2088 75 3 29 chr17 41372577 41372885 -48131668 + AluSg SINE Alu 1 300 -10 2016 109 3 10 chr17 41373794 41374098 -48130455 - AluSx SINE Alu -10 302 1 384 265 75 20 chr17 41374287 41374434 -48130119 + MIR SINE MIR 47 201 -61 1115 147 90 5 chr17 41374527 41374738 -48129815 + L1MD2 LINE L1 5663 5891 -468 829 209 60 35 chr17 41374740 41374941 -48129612 + AluJo SINE Alu 6 211 -101 847 189 0 68 chr17 41374953 41375143 -48129410 - AluSg/x SINE Alu -3 307 131 553 184 0 0 chr17 41375144 41375242 -48129311 + AluJo SINE Alu 203 300 -12 2010 202 53 9 chr17 41375242 41375678 -48128875 + L1MD2 LINE L1 5890 6344 -15 186 205 103 0 chr17 41376134 41376173 -48128380 + L2 LINE L2 3212 3254 -18 945 251 40 12 chr17 41376608 41376855 -48127698 - MIR SINE MIR -6 256 3 1559 176 59 10 chr17 41378612 41378783 -48125770 - AluJb SINE Alu -9 303 111 513 0 0 0 chr17 41378783 41378840 -48125713 + (TG)n Simple_repeat Simple_repeat 2 58 0 1559 176 59 10 chr17 41378840 41378957 -48125596 - AluJb SINE Alu -201 111 1 24 0 0 0 chr17 41379383 41379407 -48125146 + AT_rich Low_complexity Low_complexity 1 24 0 2042 92 14 27 chr17 41379407 41379702 -48124851 - AluY SINE Alu -20 291 1 2068 82 0 54 chr17 41379756 41380072 -48124481 - AluSc SINE Alu -10 299 1 2002 93 0 17 chr17 41381671 41381961 -48122592 + AluSx SINE Alu 18 302 -10 419 215 0 0 chr17 41383626 41383705 -48120848 + MIR3 SINE MIR 97 175 -33 343 61 0 0 chr17 41383705 41383754 -48120799 - AluSx SINE Alu -1 301 253 1368 111 0 15 chr17 41383755 41383954 -48120599 - AluSx SINE Alu -116 196 1 369 43 0 0 chr17 41384685 41384732 -48119821 + (GA)n Simple_repeat Simple_repeat 1 47 0 2313 81 0 7 chr17 41387338 41387646 -48116907 + AluSp SINE Alu 1 306 -7 716 99 0 81 chr17 41388256 41388294 -48116259 + U6 snRNA snRNA 1 41 -66 2162 72 0 23 chr17 41388294 41388599 -48115954 + AluY SINE Alu 1 298 -13 716 99 0 81 chr17 41388599 41388671 -48115882 + U6 snRNA snRNA 41 102 -5 1852 111 0 40 chr17 41388685 41389009 -48115544 + AluY SINE Alu 1 311 0 2114 85 0 7 chr17 41389012 41389295 -48115258 + AluSx SINE Alu 22 302 -10 1190 178 56 26 chr17 41389304 41389574 -48114979 + AluJo SINE Alu 1 278 -34 2278 69 13 3 chr17 41389988 41390292 -48114261 + AluSp SINE Alu 1 307 -6 790 125 6 65 chr17 41390295 41390463 -48114090 + AluSg/x SINE Alu 155 312 0 186 43 0 0 chr17 41390486 41390509 -48114044 + (GGGTG)n Simple_repeat Simple_repeat 4 26 0 2209 112 3 3 chr17 41392142 41392455 -48112098 + AluSp SINE Alu 1 313 0 1865 105 10 57 chr17 41392461 41392775 -48111778 + AluSq SINE Alu 1 299 -14 616 204 48 60 chr17 41392964 41393131 -48111422 + MIR3 SINE MIR 36 200 -8 2296 51 45 3 chr17 41393310 41393602 -48110951 + AluY SINE Alu 1 304 -7 228 254 75 37 chr17 41395869 41396003 -48108550 - L3b LINE CR1 -187 1396 1258 462 18 0 0 chr17 41396021 41396076 -48108477 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1058 145 0 16 chr17 41396076 41396262 -48108291 - AluSg/x SINE Alu -28 282 100 1750 114 37 4 chr17 41397116 41397432 -48107121 + AluSg SINE Alu 1 325 0 24 0 0 0 chr17 41402393 41402417 -48102136 + AT_rich Low_complexity Low_complexity 1 24 0 549 100 0 0 chr17 41402832 41402922 -48101631 + (GA)n Simple_repeat Simple_repeat 2 91 0 21 0 0 0 chr17 41405549 41405570 -48098983 + AT_rich Low_complexity Low_complexity 1 21 0 447 202 96 10 chr17 41405810 41405914 -48098639 + MER81 DNA DNA 2 114 0 1999 110 3 19 chr17 41406398 41406706 -48097847 + AluSx SINE Alu 1 303 -9 2023 114 0 20 chr17 41406818 41407124 -48097429 + AluSx SINE Alu 1 300 -12 394 105 0 64 chr17 41407171 41407277 -48097276 + AluSx SINE Alu 1 70 -233 1232 178 5 5 chr17 41407377 41407619 -48096934 + AluSx SINE Alu 67 308 0 393 272 101 59 chr17 41409590 41409759 -48094794 + MER5B DNA MER1_type 3 178 0 1724 123 79 14 chr17 41410642 41410934 -48093619 + AluSp SINE Alu 2 312 -1 748 152 14 51 chr17 41411028 41411166 -48093387 + AluJo/FLAM SINE Alu 1 133 -169 2109 114 0 7 chr17 41411166 41411465 -48093088 + AluSx SINE Alu 1 297 -15 1856 128 27 10 chr17 41411465 41411762 -48092791 + AluSx SINE Alu 1 302 -10 1322 98 67 62 chr17 41411764 41411885 -48092668 + AluSq SINE Alu 1 125 -188 2050 107 10 10 chr17 41411885 41412195 -48092358 + AluSp SINE Alu 1 310 -3 1322 98 67 62 chr17 41412195 41412297 -48092256 + AluSq SINE Alu 125 225 -88 246 32 0 0 chr17 41412315 41412346 -48092207 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1800 100 48 4 chr17 41412347 41412641 -48091912 + AluSx SINE Alu 2 307 0 1290 198 10 41 chr17 41413155 41413448 -48091105 + AluJo SINE Alu 16 299 -13 1462 129 108 32 chr17 41413461 41413739 -48090814 + AluSx SINE Alu 11 309 -3 1133 188 6 74 chr17 41413843 41414168 -48090385 + AluSq SINE Alu 1 303 0 1809 139 0 4 chr17 41414207 41414473 -48090080 + AluSq SINE Alu 1 265 -48 203 231 15 15 chr17 41414506 41414571 -48089982 + A-rich Low_complexity Low_complexity 1 65 0 227 171 0 0 chr17 41414589 41414624 -48089929 - Alu SINE Alu -232 70 36 925 191 7 77 chr17 41414625 41414792 -48089761 + AluJb SINE Alu 26 164 -148 1395 185 0 13 chr17 41414792 41415095 -48089458 + AluSg SINE Alu 1 299 -11 925 191 7 77 chr17 41415095 41415226 -48089327 + AluJb SINE Alu 164 303 -9 2192 96 0 3 chr17 41416121 41416423 -48088130 + AluY SINE Alu 1 301 -10 1353 166 44 41 chr17 41416437 41416732 -48087821 + AluJo SINE Alu 6 301 -11 302 326 83 50 chr17 41416813 41416994 -48087559 + L2 LINE L2 3082 3268 -4 1047 133 0 41 chr17 41417875 41418071 -48086482 - AluSc SINE Alu -9 300 113 527 239 150 51 chr17 41418084 41418377 -48086176 + L1ME1 LINE L1 5841 6162 -4 275 206 29 49 chr17 41418373 41418475 -48086078 + L1MD3 LINE L1 7911 8041 -1 * 721 175 8 0 chr17 41418479 41418599 -48085954 + FLAM_C SINE Alu 1 121 -12 979 211 48 28 chr17 41419566 41419855 -48084698 + AluSp SINE Alu 7 301 -12 2038 108 0 7 chr17 41420059 41420345 -48084208 + AluSg SINE Alu 6 289 -21 1409 193 3 10 chr17 41420345 41420651 -48083902 + AluSg SINE Alu 1 304 -6 821 237 24 28 chr17 41420803 41421014 -48083539 + AluJo SINE Alu 2 211 -101 1321 179 0 30 chr17 41421034 41421331 -48083222 + AluSq SINE Alu 1 288 -25 1444 168 20 56 chr17 41421941 41422245 -48082308 + AluJb SINE Alu 1 293 -19 630 225 50 21 chr17 41422312 41422510 -48082043 - MIR SINE MIR -13 249 50 212 154 0 0 chr17 41424477 41424516 -48080037 + C-rich Low_complexity Low_complexity 5 43 0 2280 80 0 3 chr17 41425349 41425662 -48078891 - AluSx SINE Alu 0 312 1 1489 131 0 122 chr17 41425663 41425999 -48078554 - AluJb SINE Alu -5 297 3 295 333 103 18 chr17 41426126 41426291 -48078262 - MIR SINE MIR -74 188 10 338 295 104 64 chr17 41426485 41426658 -48077895 - MIR SINE MIR -42 220 41 975 184 3 100 chr17 41426732 41427063 -48077490 - AluJo SINE Alu 0 302 4 1664 135 23 16 chr17 41427118 41427422 -48077131 + AluSc SINE Alu 1 306 -3 936 133 218 32 chr17 41427509 41427642 -48076911 + AluSg1 SINE Alu 1 108 -201 1512 69 4 26 chr17 41427642 41427873 -48076680 + AluY SINE Alu 1 226 -85 936 133 218 32 chr17 41427873 41427987 -48076566 + AluSg1 SINE Alu 108 294 -15 787 186 0 67 chr17 41428117 41428311 -48076242 + AluSg/x SINE Alu 100 280 -30 1007 158 0 12 chr17 41428370 41428541 -48076012 + AluSg/x SINE Alu 125 293 -17 1011 228 114 22 chr17 41428568 41428840 -48075713 + AluJo SINE Alu 5 301 -1 2248 74 7 10 chr17 41428846 41429145 -48075408 + AluSp SINE Alu 2 299 -14 2281 84 0 3 chr17 41429146 41429454 -48075099 + AluSp SINE Alu 1 307 -6 725 119 0 80 chr17 41429455 41429606 -48074947 + Tigger4(Zombi) DNA MER2_type 2513 2651 -80 32 57 0 0 chr17 41630267 41630320 -47874233 + GC_rich Low_complexity Low_complexity 1 53 0 345 344 76 25 chr17 41630369 41630526 -47874027 - L1MCa LINE L1 -4036 2390 2226 23 33 0 0 chr17 41631204 41631234 -47873319 + GC_rich Low_complexity Low_complexity 1 30 0 351 0 0 0 chr17 41632246 41632285 -47872268 + (A)n Simple_repeat Simple_repeat 1 39 0 389 240 60 10 chr17 41634341 41634441 -47870112 + MIR3 SINE MIR 101 205 -3 2013 179 89 52 chr17 41634852 41635337 -47869216 - MLT1D LTR MaLR 0 505 3 794 278 60 13 chr17 41635355 41635589 -47868964 - MIR SINE MIR -2 260 16 358 295 35 68 chr17 41636143 41636354 -47868199 + MIR SINE MIR 56 258 -4 227 297 62 55 chr17 41636430 41636558 -47867995 + L2 LINE L2 3136 3264 -8 2000 85 11 7 chr17 41636560 41636869 -47867684 + AluSx SINE Alu 1 310 0 309 51 0 0 chr17 41637105 41637144 -47867409 + (CCG)n Simple_repeat Simple_repeat 1 39 0 916 61 15 23 chr17 41637907 41638039 -47866514 + AluSg SINE Alu 1 131 -179 1233 64 0 0 chr17 41638149 41638305 -47866248 + AluSp/q SINE Alu 158 313 0 310 276 60 43 chr17 41638310 41638426 -47866127 + MIR SINE MIR 32 149 -113 2168 95 0 7 chr17 41639095 41639390 -47865163 + AluSx SINE Alu 1 293 -19 318 291 94 17 chr17 41640251 41640368 -47864185 + MIR SINE MIR 19 144 -64 1657 140 16 63 chr17 41640653 41640834 -47863719 - AluSx SINE Alu -11 301 113 2217 102 7 0 chr17 41640834 41641139 -47863414 - AluSc SINE Alu -2 307 1 189 0 0 0 chr17 41641140 41641161 -47863392 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2143 102 0 0 chr17 41641161 41641444 -47863109 - AluSx SINE Alu -29 283 1 1657 140 16 63 chr17 41641444 41641574 -47862979 - AluSx SINE Alu -197 115 2 824 263 33 4 chr17 41642310 41642542 -47862011 - MIR SINE MIR -11 251 10 335 62 0 0 chr17 41643922 41643970 -47860583 - L1P4 LINE L1 -380 5788 5741 1241 162 10 0 chr17 41643971 41644198 -47860355 - AluJo SINE Alu 0 312 83 633 320 101 35 chr17 41644198 41644511 -47860042 + L2 LINE L2 2349 2692 -622 2280 93 0 13 chr17 41644511 41644821 -47859732 - AluSg SINE Alu -4 306 1 633 320 101 35 chr17 41644821 41644882 -47859671 + L2 LINE L2 2692 2748 -566 273 262 48 24 chr17 41644888 41645014 -47859539 + L1MB8 LINE L1 5950 6078 -100 455 325 97 50 chr17 41645023 41645133 -47859420 + L2 LINE L2 2827 2930 -383 1704 108 12 4 chr17 41645133 41645382 -47859171 - AluSq SINE Alu -10 303 53 455 325 97 50 chr17 41645382 41645736 -47858817 + L2 LINE L2 2930 3313 0 1958 110 7 20 chr17 41646459 41646744 -47857809 + AluSx SINE Alu 1 283 -29 264 30 0 0 chr17 41646744 41646777 -47857776 + (CAAT)n Simple_repeat Simple_repeat 2 34 0 1958 110 7 20 chr17 41646777 41646791 -47857762 + AluSx SINE Alu 283 296 -16 564 236 177 0 chr17 41646911 41647114 -47857439 + L2 LINE L2 2477 2715 -599 2008 143 0 19 chr17 41647154 41647469 -47857084 + AluSx SINE Alu 1 309 -3 1921 164 7 0 chr17 41647480 41647790 -47856763 + AluSx SINE Alu 1 312 0 1560 208 14 0 chr17 41647800 41648089 -47856464 + AluJb SINE Alu 1 293 -19 2250 91 7 0 chr17 41648095 41648403 -47856150 + AluSp SINE Alu 1 310 -3 402 143 23 160 chr17 41648426 41648499 -47856054 - L1MB8 LINE L1 -53 6125 6044 2228 110 0 0 chr17 41648499 41648799 -47855754 - AluSg SINE Alu -6 304 5 1911 137 65 0 chr17 41648809 41649102 -47855451 - AluSx SINE Alu 0 312 1 402 143 23 160 chr17 41649102 41649192 -47855361 - L1MB8 LINE L1 -144 6034 5975 971 271 176 21 chr17 41649194 41649532 -47855021 + L2 LINE L2 2689 2974 -339 1639 153 3 46 chr17 41649532 41649858 -47854695 - AluSx SINE Alu 0 312 1 971 271 176 21 chr17 41649858 41650071 -47854482 + L2 LINE L2 2974 3313 0 712 157 9 9 chr17 41650281 41650396 -47854157 + FLAM_A SINE Alu 12 126 -16 2300 110 0 0 chr17 41650596 41650904 -47853649 - AluSc SINE Alu 0 309 2 338 261 61 43 chr17 41651239 41651354 -47853199 + MIR SINE MIR 97 213 -49 23 33 0 0 chr17 41651354 41651384 -47853169 + AT_rich Low_complexity Low_complexity 1 30 0 2441 67 0 0 chr17 41651390 41651687 -47852866 + AluY SINE Alu 1 297 -14 234 62 0 0 chr17 41651722 41651754 -47852799 + (ATG)n Simple_repeat Simple_repeat 2 33 0 1954 141 3 0 chr17 41651756 41652047 -47852506 - AluSx SINE Alu -20 292 1 236 385 30 18 chr17 41652133 41652300 -47852253 + L2 LINE L2 2593 2761 -553 772 260 48 0 chr17 41652300 41652508 -47852045 + MIR SINE MIR 1 218 -44 364 312 52 76 chr17 41652653 41652846 -47851707 + L2 LINE L2 2825 3012 -260 2268 107 3 0 chr17 41652846 41653156 -47851397 + AluSx SINE Alu 2 312 0 364 312 52 76 chr17 41653156 41653212 -47851341 + L2 LINE L2 3012 3068 -204 1053 281 0 16 chr17 41653238 41653494 -47851059 + MIR SINE MIR 10 261 -1 246 323 73 48 chr17 41653532 41653656 -47850897 + L2 LINE L2 3124 3250 -22 590 299 37 11 chr17 41653682 41653869 -47850684 - MIR SINE MIR -21 241 50 267 222 133 22 chr17 41653864 41653954 -47850599 + MIR SINE MIR 106 205 -57 * 216 287 86 0 chr17 41656258 41656360 -47848193 + MIR SINE MIR 20 141 -67 2291 87 6 6 chr17 41656371 41656683 -47847870 + AluSp SINE Alu 1 312 -1 200 257 28 83 chr17 41657493 41657602 -47846951 + C-rich Low_complexity Low_complexity 6 108 0 422 260 93 20 chr17 41661121 41661271 -47843282 + MIR3 SINE MIR 34 194 -14 358 279 184 7 chr17 41661528 41661675 -47842878 - MIR SINE MIR -34 228 56 216 200 18 0 chr17 41661711 41661766 -47842787 + (CAGG)n Simple_repeat Simple_repeat 4 59 0 22 0 0 0 chr17 41662257 41662279 -47842274 + AT_rich Low_complexity Low_complexity 1 22 0 225 186 0 0 chr17 41663728 41663771 -47840782 - L3 LINE CR1 -115 1462 1420 242 306 74 16 chr17 41663955 41664076 -47840477 - MIR SINE MIR -63 145 18 260 340 48 34 chr17 41665009 41665156 -47839397 - MIR SINE MIR -14 248 100 2282 97 0 3 chr17 41668204 41668502 -47836051 - AluSx SINE Alu -15 297 1 187 339 0 0 chr17 41669872 41669928 -47834625 + MIR SINE MIR 28 83 -125 1888 164 7 0 chr17 41670261 41670566 -47833987 + AluJo SINE Alu 1 307 -5 982 196 0 0 chr17 41671323 41671491 -47833062 - FRAM SINE Alu -10 166 1 215 209 0 0 chr17 41671502 41671545 -47833008 + L2 LINE L2 3216 3258 -14 351 96 0 0 chr17 41671546 41671598 -47832955 + (TGAA)n Simple_repeat Simple_repeat 1 52 0 279 340 34 48 chr17 41671707 41671854 -47832699 + MIR SINE MIR 2 146 -116 862 300 166 13 chr17 41672815 41673465 -47831088 + L2 LINE L2 2553 3313 0 294 241 8 0 chr17 41673626 41673696 -47830857 - MIR SINE MIR -60 148 91 2239 73 3 20 chr17 41673877 41674177 -47830376 + AluY SINE Alu 1 295 -16 1904 131 3 23 chr17 41674914 41675219 -47829334 - AluJo SINE Alu -13 299 1 1367 217 94 8 chr17 41675295 41675677 -47828876 - MLT1C LTR MaLR -52 415 1 503 145 0 0 chr17 41675704 41675780 -47828773 - AluJ/FLAM SINE Alu -222 90 15 1484 221 107 16 chr17 41675794 41675848 -47828705 - L1MC4a LINE L1 -1800 6008 5960 2313 106 3 0 chr17 41675848 41676159 -47828394 - AluSx SINE Alu 0 312 1 1484 221 107 16 chr17 41676159 41676588 -47827965 - L1MC4a LINE L1 -1848 5960 5481 283 292 11 34 chr17 41676651 41676829 -47827724 + CT-rich Low_complexity Low_complexity 1 174 0 281 324 90 0 chr17 41677118 41677229 -47827324 + MIR SINE MIR 16 136 -72 1840 137 13 43 chr17 41677269 41677426 -47827127 - AluJo SINE Alu -22 290 145 2432 60 0 13 chr17 41677426 41677740 -47826813 - AluY SINE Alu -1 310 1 1840 137 13 43 chr17 41677740 41677881 -47826672 - AluJo SINE Alu -167 145 1 2329 74 3 0 chr17 41678524 41678823 -47825730 - AluSc SINE Alu -8 301 2 406 259 65 77 chr17 41679052 41679184 -47825369 + MIR SINE MIR 7 139 -123 1822 171 3 0 chr17 41679191 41679495 -47825058 + AluJb SINE Alu 1 305 -7 313 105 0 35 chr17 41679495 41679544 -47825009 + L1MB4 LINE L1 6132 6180 0 2206 123 3 0 chr17 41679552 41679860 -47824693 + AluSx SINE Alu 1 309 -3 406 259 65 77 chr17 41679860 41679888 -47824665 + MIR SINE MIR 146 174 -88 1871 129 0 7 chr17 41680000 41680278 -47824275 + AluSx SINE Alu 30 305 -7 361 294 29 0 chr17 41680350 41680452 -47824101 + MIR SINE MIR 39 143 -119 1653 103 34 89 chr17 41680874 41681166 -47823387 - AluJo SINE Alu -13 299 24 309 286 53 70 chr17 41681191 41681362 -47823191 + MIR SINE MIR 77 244 -18 580 263 115 0 chr17 41681723 41681946 -47822607 + MIR SINE MIR 16 262 0 1376 222 168 13 chr17 41682508 41683212 -47821341 + L2 LINE L2 2482 3294 -19 186 346 153 30 chr17 41683541 41683743 -47820810 + L2 LINE L2 2837 3063 -209 526 259 44 7 chr17 41683970 41684105 -47820448 + MIR SINE MIR 73 212 -50 942 103 37 0 chr17 41684274 41684410 -47820143 - FAM SINE Alu -13 172 32 251 200 0 0 chr17 41684621 41684666 -47819887 - AluYb8 SINE Alu -130 178 134 340 243 84 19 chr17 41685396 41685503 -47819050 + MIR SINE MIR 33 146 -62 384 332 61 70 chr17 41685614 41685957 -47818596 - L2 LINE L2 -5 3267 2928 1270 211 124 0 chr17 41686615 41686881 -47817672 - AluJo SINE Alu -1 301 3 691 232 179 0 chr17 41686894 41687101 -47817452 - MIR SINE MIR -13 249 6 396 367 226 14 chr17 41687339 41687889 -47816664 - L2 LINE L2 -495 2819 2154 212 268 56 28 chr17 41690260 41690331 -47814222 + MIR SINE MIR 44 116 -92 2147 135 0 0 chr17 41690518 41690829 -47813724 - AluSx SINE Alu -1 311 1 240 185 0 0 chr17 41691694 41691748 -47812805 + CT-rich Low_complexity Low_complexity 3 56 0 1778 154 0 47 chr17 41694487 41694659 -47809894 - AluJo SINE Alu -8 304 152 2345 84 3 0 chr17 41694659 41694956 -47809597 - AluSp SINE Alu -15 298 1 1778 154 0 47 chr17 41694956 41695102 -47809451 - AluJo SINE Alu -160 152 1 268 302 66 19 chr17 41695125 41695231 -47809322 + L2 LINE L2 3159 3269 -3 525 286 45 30 chr17 41696669 41696868 -47807685 - MIR3 SINE MIR 0 208 7 219 246 18 0 chr17 41698718 41698775 -47805778 + CT-rich Low_complexity Low_complexity 2 59 0 336 259 11 63 chr17 41700919 41701108 -47803445 + GA-rich Low_complexity Low_complexity 2 180 0 372 265 157 24 chr17 41701888 41702054 -47802499 + MIR SINE MIR 21 208 -54 235 262 16 0 chr17 41702499 41702560 -47801993 + (TTCA)n Simple_repeat Simple_repeat 1 62 0 447 252 77 0 chr17 41702607 41702762 -47801791 - L1ME3 LINE L1 -8 6154 5988 2073 117 0 28 chr17 41702820 41703137 -47801416 - AluJb SINE Alu -4 308 1 370 250 293 21 chr17 41703267 41703455 -47801098 - MIR SINE MIR -11 251 13 486 262 141 37 chr17 41704799 41704990 -47799563 + MIR SINE MIR 52 262 0 2306 99 0 3 chr17 41705128 41705431 -47799122 - AluSq SINE Alu -11 302 1 548 346 51 0 chr17 41705793 41706010 -47798543 + MIR SINE MIR 28 255 -7 625 285 32 0 chr17 41706031 41706189 -47798364 + MIR SINE MIR 20 182 -80 185 56 0 56 chr17 41707548 41707584 -47796969 + (CCCCG)n Simple_repeat Simple_repeat 1 34 0 33 0 0 0 chr17 41707725 41707758 -47796795 + GC_rich Low_complexity Low_complexity 1 33 0 24 67 0 0 chr17 41707917 41707962 -47796591 + GC_rich Low_complexity Low_complexity 1 45 0 217 348 116 14 chr17 41708071 41708209 -47796344 - MIR SINE MIR -79 183 32 205 339 45 9 chr17 41708252 41708364 -47796189 - L2 LINE L2 -213 3059 2944 664 223 101 42 chr17 41708624 41708862 -47795691 + MIR SINE MIR 11 262 0 490 200 50 0 chr17 41708931 41709031 -47795522 + MIR SINE MIR 44 148 -60 832 159 0 8 chr17 41709100 41709232 -47795321 + FLAM_A SINE Alu 1 131 -2 1998 100 14 0 chr17 41709233 41709542 -47795011 + AluSx SINE Alu 1 313 0 262 264 109 23 chr17 41710089 41710215 -47794338 - MIR SINE MIR -63 145 23 2070 141 3 0 chr17 41710341 41710647 -47793906 + AluSx SINE Alu 1 307 -5 184 147 29 0 chr17 41710734 41710768 -47793785 - MIR SINE MIR -108 154 120 2386 63 0 3 chr17 41711358 41711658 -47792895 + AluSp SINE Alu 1 299 -14 197 306 16 0 chr17 41712158 41712220 -47792333 - L2 LINE L2 -3 3310 3248 263 68 0 23 chr17 41712293 41712337 -47792216 - FAM SINE Alu -2 173 131 188 81 0 27 chr17 41712443 41712480 -47792073 - L2 LINE L2 -209 3063 3028 213 238 0 0 chr17 41714636 41714678 -47789875 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 456 225 25 8 chr17 41714824 41714944 -47789609 - MIR SINE MIR -61 201 80 1902 155 0 0 chr17 41714946 41715243 -47789310 - AluJb SINE Alu -15 297 1 2490 47 0 0 chr17 41715248 41715544 -47789009 - AluY SINE Alu -15 296 1 373 278 125 7 chr17 41715926 41716070 -47788483 + MIR3 SINE MIR 24 184 -24 218 303 169 0 chr17 41716243 41716332 -47788221 + L2 LINE L2 3208 3311 -2 333 186 0 0 chr17 41716523 41716593 -47787960 + (TG)n Simple_repeat Simple_repeat 2 71 0 211 133 0 22 chr17 41717613 41717658 -47786895 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 212 221 0 15 chr17 41717932 41718000 -47786553 + CT-rich Low_complexity Low_complexity 1 67 0 22 0 0 0 chr17 41718671 41718693 -47785860 + GC_rich Low_complexity Low_complexity 1 22 0 222 192 0 0 chr17 41719351 41719403 -47785150 + GA-rich Low_complexity Low_complexity 3 54 0 25 31 0 0 chr17 41719876 41719908 -47784645 + GC_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr17 41720357 41720385 -47784168 + GC_rich Low_complexity Low_complexity 1 28 0 334 291 34 83 chr17 41720909 41721080 -47783473 + L1MCa LINE L1 2226 3564 -2862 28 19 0 56 chr17 41721141 41721195 -47783358 + GC_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr17 41721222 41721243 -47783310 + GC_rich Low_complexity Low_complexity 1 21 0 270 0 0 0 chr17 41722371 41722401 -47782152 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 248 220 0 0 chr17 41728044 41728103 -47776450 + (TCTG)n Simple_repeat Simple_repeat 2 60 0 236 288 30 0 chr17 41729465 41729531 -47775022 - L2 LINE L2 0 3272 3205 262 194 41 10 chr17 41730173 41730271 -47774282 + CT-rich Low_complexity Low_complexity 1 101 0 2381 94 3 0 chr17 41730989 41731298 -47773255 + AluSp SINE Alu 1 310 -3 378 298 53 8 chr17 41731353 41731484 -47773069 - MIR SINE MIR -10 252 116 1984 155 3 3 chr17 41731510 41731820 -47772733 - AluJb SINE Alu -2 310 1 247 243 0 29 chr17 41731900 41731970 -47772583 + CT-rich Low_complexity Low_complexity 2 69 0 234 333 13 22 chr17 41732354 41732495 -47772058 + CT-rich Low_complexity Low_complexity 1 229 0 234 0 0 0 chr17 41732642 41732668 -47771885 + (T)n Simple_repeat Simple_repeat 1 26 0 212 259 99 25 chr17 41734315 41734396 -47770157 + MIR SINE MIR 21 107 -101 193 119 48 0 chr17 41734465 41734507 -47770046 + (TTA)n Simple_repeat Simple_repeat 1 44 0 240 379 0 11 chr17 41734518 41734613 -47769940 + MIR SINE MIR 168 261 -1 2061 125 0 3 chr17 41734767 41735093 -47769460 + AluSx SINE Alu 1 312 0 1698 103 9 0 chr17 41735204 41735437 -47769116 - L1PA10 LINE L1 -10 6158 5924 392 244 0 39 chr17 41735538 41735666 -47768887 - L1MC4 LINE L1 -1339 6983 1995 255 358 70 26 chr17 41735671 41735900 -47768653 - L2 LINE L2 -612 2702 2464 312 27 0 0 chr17 41737011 41737048 -47767505 + (CA)n Simple_repeat Simple_repeat 1 37 0 447 265 103 49 chr17 41737858 41738062 -47766491 + MIR SINE MIR 34 248 -14 2424 77 3 3 chr17 41738632 41738945 -47765608 - AluSp SINE Alu 0 313 1 2068 149 3 0 chr17 41738973 41739281 -47765272 - AluSg SINE Alu -1 309 1 462 118 13 0 chr17 41739281 41739357 -47765196 + MER69 DNA AcHobo 2448 2524 -2 606 249 87 65 chr17 41739377 41739550 -47765003 - MIR SINE MIR -12 250 69 2427 67 0 0 chr17 41739550 41739848 -47764705 - AluY SINE Alu -13 298 1 606 249 87 65 chr17 41739848 41739903 -47764650 - MIR SINE MIR -193 69 17 536 71 10 31 chr17 41740138 41740236 -47764317 + MER53 DNA DNA 5 100 -89 475 102 71 0 chr17 41740156 41740254 -47764299 - MER53 DNA DNA -12 177 73 * 2091 118 0 3 chr17 41740467 41740764 -47763789 + AluSp SINE Alu 1 296 -17 189 74 0 0 chr17 41741283 41741310 -47763243 + (GGA)n Simple_repeat Simple_repeat 3 29 0 22 80 0 0 chr17 41741428 41741478 -47763075 + GC_rich Low_complexity Low_complexity 1 50 0 443 257 176 45 chr17 41742494 41742716 -47761837 - MIR SINE MIR -1 261 11 1198 154 30 5 chr17 41743396 41743597 -47760956 + AluJb SINE Alu 86 291 -21 347 283 246 0 chr17 41744016 41744154 -47760399 - MIR SINE MIR -13 249 78 219 333 53 0 chr17 41744963 41745038 -47759515 - MIR SINE MIR -151 111 33 225 94 0 0 chr17 41745399 41745431 -47759122 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 2135 93 7 0 chr17 41745583 41745873 -47758680 + AluSg SINE Alu 1 292 -18 364 330 168 10 chr17 41746253 41746462 -47758091 + MIR SINE MIR 2 243 -19 340 278 60 30 chr17 41748675 41748808 -47755745 + MIR SINE MIR 16 152 -56 2343 75 3 3 chr17 41748936 41749231 -47755322 + AluSp SINE Alu 1 295 -18 246 367 0 0 chr17 41749236 41749315 -47755238 - MIR3 SINE MIR -41 167 89 286 188 72 0 chr17 41749802 41749871 -47754682 - MER91A DNA MER1_type 0 196 123 338 338 88 14 chr17 41749899 41750047 -47754506 - MER91A DNA MER1_type -37 159 1 520 311 49 15 chr17 41750049 41750252 -47754301 - MIR SINE MIR -24 238 34 1068 238 70 0 chr17 41751861 41752105 -47752448 + MIR SINE MIR 2 262 0 1902 130 38 0 chr17 41752125 41752417 -47752136 - AluSq SINE Alu -8 305 3 2028 137 7 0 chr17 41752419 41752711 -47751842 - AluSx SINE Alu -18 294 1 610 295 119 1 chr17 41752830 41753059 -47751494 + MIR SINE MIR 10 262 0 1704 243 26 0 chr17 41753920 41754340 -47750213 + L1ME2 LINE L1 5697 6127 -37 2270 109 0 0 chr17 41754340 41754644 -47749909 - AluSc SINE Alu -5 304 1 596 103 0 0 chr17 41754663 41754741 -47749812 - AluS SINE Alu -234 78 1 1339 107 0 0 chr17 41754752 41754959 -47749594 - AluSg/x SINE Alu 0 310 112 653 157 0 0 chr17 41754959 41755061 -47749492 + AluJo/FRAM SINE Alu 194 295 -17 1857 124 8 53 chr17 41755061 41755416 -47749137 - Tigger2a DNA MER2_type -95 339 1 1842 164 6 6 chr17 41755457 41755768 -47748785 - AluSx SINE Alu -1 311 1 2142 87 10 7 chr17 41755841 41756139 -47748414 + AluSp SINE Alu 1 299 -14 1367 119 5 5 chr17 41756391 41756585 -47747968 + AluSp SINE Alu 1 194 -119 525 120 0 0 chr17 41756586 41756678 -47747875 + (TA)n Simple_repeat Simple_repeat 2 93 0 409 286 18 65 chr17 41756680 41756940 -47747613 - L1MC4a LINE L1 -1949 5859 5611 249 33 0 0 chr17 41756940 41756970 -47747583 + (TG)n Simple_repeat Simple_repeat 2 31 0 409 286 18 65 chr17 41756970 41756985 -47747568 - L1MC4a LINE L1 -2197 5611 5597 2104 108 0 10 chr17 41756987 41757283 -47747270 - AluSc SINE Alu -16 293 1 194 239 209 0 chr17 41757345 41757412 -47747141 + L2 LINE L2 3186 3266 -6 548 44 0 0 chr17 41757492 41757560 -47746993 - AluSp/q SINE Alu -14 299 232 809 98 0 9 chr17 41757561 41757673 -47746880 - AluSp SINE Alu -202 111 1 233 275 88 0 chr17 41757695 41757775 -47746778 + L2 LINE L2 3227 3313 0 1755 171 3 3 chr17 41758159 41758451 -47746102 + AluJb SINE Alu 1 292 -20 2251 79 26 3 chr17 41758616 41758920 -47745633 - AluSp SINE Alu -2 311 1 271 248 71 97 chr17 41759698 41759811 -47744742 - L2 LINE L2 -1 3312 3203 584 279 165 25 chr17 41759919 41760241 -47744312 - L2 LINE L2 -436 2878 2512 580 268 154 5 chr17 41761194 41761414 -47743139 - MIR SINE MIR -3 259 7 181 269 19 0 chr17 41761418 41761470 -47743083 - L2 LINE L2 -346 2967 2915 1442 163 57 0 chr17 41761742 41761987 -47742566 + AluJb SINE Alu 46 304 -8 2116 107 13 0 chr17 41761988 41762288 -47742265 + AluSp SINE Alu 2 305 -8 2131 103 10 3 chr17 41762523 41762823 -47741730 + AluSx SINE Alu 1 302 -10 1949 157 0 7 chr17 41762824 41763130 -47741423 + AluJb SINE Alu 1 304 -8 1034 143 70 105 chr17 41763397 41763655 -47740898 + MIR SINE MIR 14 262 0 299 246 106 91 chr17 41763677 41763814 -47740739 - L1ME LINE L1 -346 5775 5633 2387 80 0 0 chr17 41763814 41764116 -47740437 - AluSc SINE Alu -5 304 3 299 246 106 91 chr17 41764116 41764177 -47740376 - L1ME LINE L1 -488 5633 5574 266 272 130 0 chr17 41765964 41766056 -47738497 + MIR SINE MIR 118 221 -41 368 264 76 103 chr17 41766628 41766839 -47737714 - L1ME4a LINE L1 0 6823 6608 279 0 0 0 chr17 41766839 41766870 -47737683 + (CA)n Simple_repeat Simple_repeat 2 32 0 1926 137 7 0 chr17 41766876 41767160 -47737393 - AluSx SINE Alu -26 286 1 368 264 76 103 chr17 41767160 41767309 -47737244 - L1ME4a LINE L1 -220 6603 1765 1129 126 0 0 chr17 41767566 41767717 -47736836 + AluSx SINE Alu 3 153 -159 301 290 114 98 chr17 41767717 41767972 -47736581 - L1MC4a LINE L1 -1911 5897 5639 2301 101 3 0 chr17 41768027 41768335 -47736218 + AluSq SINE Alu 1 309 -4 280 238 12 38 chr17 41768697 41768777 -47735776 + MIR SINE MIR 111 188 -74 194 288 0 0 chr17 41769235 41769294 -47735259 - L2 LINE L2 -223 3049 2991 183 313 0 0 chr17 41769573 41769621 -47734932 - MIR SINE MIR -6 256 209 2250 98 0 0 chr17 41769698 41769995 -47734558 - AluSc SINE Alu -12 297 1 1512 153 55 25 chr17 41770021 41770296 -47734257 - AluJb SINE Alu -28 284 2 2207 99 3 29 chr17 41770307 41770620 -47733933 - AluSx SINE Alu -6 306 2 213 333 0 0 chr17 41770649 41770727 -47733826 - L2 LINE L2 -298 2974 2897 208 238 244 24 chr17 41770722 41770817 -47733736 + MER5B DNA MER1_type 12 136 -53 * 1306 160 142 59 chr17 41770822 41770932 -47733621 + MER47A DNA MER2_type 1 100 -2223 1722 137 4 0 chr17 41770932 41771223 -47733330 - AluSp SINE Alu 0 313 43 1306 160 142 59 chr17 41771223 41771268 -47733285 + MER47A DNA MER2_type 100 140 -2183 1789 171 10 0 chr17 41771268 41771573 -47732980 + AluJo SINE Alu 1 308 -4 1306 160 142 59 chr17 41771573 41771754 -47732799 + MER47A DNA MER2_type 140 366 0 1910 96 31 34 chr17 41771776 41772067 -47732486 - AluSg SINE Alu -18 292 3 1371 106 45 0 chr17 41773175 41773319 -47731234 - AluSg/x SINE Alu -22 290 133 2181 81 39 0 chr17 41773319 41773604 -47730949 - AluSg SINE Alu -14 296 1 1371 106 45 0 chr17 41773604 41773657 -47730896 - AluSg/x SINE Alu -179 133 84 1963 136 9 25 chr17 41775098 41775415 -47729138 + AluJo SINE Alu 1 312 0 340 393 25 5 chr17 41779815 41780016 -47724537 + MIR SINE MIR 9 213 -49 795 222 127 0 chr17 41782166 41782355 -47722198 + MIR SINE MIR 18 230 -32 354 326 35 7 chr17 41782558 41782702 -47721851 + MIR SINE MIR 36 183 -79 216 399 52 0 chr17 41783631 41783804 -47720749 - L3b LINE CR1 -141 1442 1261 2272 100 33 0 chr17 41784465 41784765 -47719788 - AluSx SINE Alu -2 310 1 377 280 180 45 chr17 41785700 41785900 -47718653 + MIR SINE MIR 7 233 -29 378 296 68 6 chr17 41786191 41786367 -47718186 + L2 LINE L2 2020 2206 -1108 1806 148 7 39 chr17 41786378 41786683 -47717870 - AluJb SINE Alu -17 295 1 712 266 93 13 chr17 41786764 41786916 -47717637 + MIR SINE MIR 2 140 -122 1335 168 133 38 chr17 41786916 41787030 -47717523 + LTR54B LTR ERV1 2 104 -394 2239 104 3 0 chr17 41787030 41787319 -47717234 - AluSp SINE Alu -17 296 7 1335 168 133 38 chr17 41787319 41787456 -47717097 + LTR54B LTR ERV1 104 227 -271 2633 63 0 19 chr17 41787456 41787773 -47716780 + AluY SINE Alu 1 311 0 1335 168 133 38 chr17 41787773 41787973 -47716580 + LTR54B LTR ERV1 227 497 -1 712 266 93 13 chr17 41787973 41788057 -47716496 + MIR SINE MIR 140 257 -5 327 258 115 53 chr17 41788087 41788296 -47716257 + L2 LINE L2 2523 2744 -570 2184 104 4 0 chr17 41788314 41788622 -47715931 + AluSg SINE Alu 1 309 0 244 146 146 0 chr17 41789019 41789067 -47715486 + L2 LINE L2 3237 3291 -22 2443 93 3 3 chr17 41789361 41789671 -47714882 + AluSx SINE Alu 2 311 -1 2221 107 0 46 chr17 41790713 41791039 -47713514 + AluY SINE Alu 1 311 0 2270 104 10 0 chr17 41791773 41792072 -47712481 - AluSp SINE Alu -10 303 2 1510 163 57 0 chr17 41792073 41792318 -47712235 - AluJb SINE Alu -8 304 46 567 264 154 5 chr17 41792646 41792866 -47711687 + MIR SINE MIR 7 259 -3 549 276 165 25 chr17 41793820 41794142 -47710411 + L2 LINE L2 2512 2878 -436 256 221 77 96 chr17 41794259 41794363 -47710190 + L2 LINE L2 3170 3271 -1 2413 84 3 3 chr17 41795141 41795439 -47709114 + AluSp SINE Alu 1 298 -15 684 251 79 20 chr17 41795519 41795722 -47708831 - MER58C DNA MER1_type 0 215 1 1439 168 4 22 chr17 41795886 41796118 -47708435 + AluJo SINE Alu 6 233 -79 263 122 0 0 chr17 41796119 41796160 -47708393 - MADE1 DNA Mariner -38 42 2 * 395 160 27 0 chr17 41796160 41796223 -47708330 + AluJo SINE Alu 233 297 -5 1477 194 48 31 chr17 41796327 41796621 -47707932 - AluJo SINE Alu -13 299 1 730 206 0 0 chr17 41796669 41796800 -47707753 + FLAM_A SINE Alu 1 131 -2 1103 144 5 0 chr17 41796922 41798415 -47706138 + ALR/Alpha Satellite centromeric 1 1500 -48 1140 156 7 1 chr17 41799630 41809075 -47695478 + ALR/Alpha Satellite centromeric 1 9509 -24 280 81 0 0 chr17 41809175 41809212 -47695341 - Alu SINE Alu -262 41 5 378 289 86 10 chr17 41809279 41809476 -47695077 + L1ME1 LINE L1 5879 6090 -76 279 286 143 17 chr17 41809621 41809740 -47694813 - L2 LINE L2 0 3272 3139 1932 151 3 24 chr17 41809807 41810105 -47694448 - AluJb SINE Alu -20 292 1 2012 151 3 3 chr17 41810798 41811109 -47693444 - AluJo SINE Alu -1 311 1 289 295 10 19 chr17 41812186 41812310 -47692243 - MIR SINE MIR -72 136 36 1779 130 45 55 chr17 41812691 41812999 -47691554 - AluJb SINE Alu -7 305 1 236 177 81 16 chr17 41813043 41813105 -47691448 - MIR SINE MIR -61 147 82 328 239 137 17 chr17 41814572 41814689 -47689864 - MIR SINE MIR -62 146 16 189 107 0 0 chr17 41814689 41814717 -47689836 + (T)n Simple_repeat Simple_repeat 1 28 0 1863 88 42 0 chr17 41814717 41814955 -47689598 - AluSq SINE Alu -65 248 1 257 279 72 45 chr17 41816161 41816272 -47688281 - MIR3 SINE MIR -6 202 89 2638 128 7 24 chr17 41816327 41816779 -47687774 - L1MB7 LINE L1 -20 6164 5721 180 196 39 20 chr17 41817751 41817802 -47686751 - MIR SINE MIR -10 252 201 2362 99 0 0 chr17 41817849 41818141 -47686412 + AluSc SINE Alu 1 292 -17 215 59 0 29 chr17 41819021 41819055 -47685498 + (TG)n Simple_repeat Simple_repeat 2 34 0 572 218 115 6 chr17 41819055 41819204 -47685349 - FRAM SINE Alu -143 169 1 22 0 0 0 chr17 41820273 41820295 -47684258 + AT_rich Low_complexity Low_complexity 1 22 0 186 147 88 0 chr17 41823354 41823388 -47681165 - MIR SINE MIR -26 236 200 2525 76 3 0 chr17 41824201 41824503 -47680050 - AluSq SINE Alu -10 303 1 207 0 0 0 chr17 41824509 41824532 -47680021 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1019 76 0 0 chr17 41824532 41824651 -47679902 - AluSq/x SINE Alu -191 121 3 225 0 0 0 chr17 41824965 41824990 -47679563 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2282 120 0 0 chr17 41826848 41827148 -47677405 - AluSx SINE Alu -12 300 1 490 301 96 13 chr17 41827479 41827718 -47676835 - L2 LINE L2 0 3272 3014 422 254 121 6 chr17 41827930 41828095 -47676458 + MER5A DNA MER1_type 3 186 -3 543 306 48 48 chr17 41828236 41828471 -47676082 + L1ME1 LINE L1 5875 6112 -54 2246 109 3 3 chr17 41828471 41828773 -47675780 + AluSg SINE Alu 1 302 -8 543 306 48 48 chr17 41828773 41828828 -47675725 + L1ME1 LINE L1 6111 6165 -1 2229 119 0 16 chr17 41828843 41829154 -47675399 + AluSg SINE Alu 1 306 -4 1526 215 20 18 chr17 41829160 41829560 -47674993 + L1M4 LINE L1 4794 5194 -952 2248 93 0 66 chr17 41829568 41829901 -47674652 + AluSp SINE Alu 1 311 -2 1879 189 0 3 chr17 41829907 41830209 -47674344 + AluJb SINE Alu 1 301 -11 1424 169 4 35 chr17 41830212 41830467 -47674086 + AluSx SINE Alu 1 247 -65 2384 92 7 0 chr17 41830567 41830871 -47673682 - AluSp SINE Alu -7 306 1 195 129 0 0 chr17 41831071 41831102 -47673451 + (A)n Simple_repeat Simple_repeat 1 31 0 1208 191 47 0 chr17 41833130 41833345 -47671208 - AluJo SINE Alu -9 303 79 2604 71 3 0 chr17 41833439 41833749 -47670804 - AluSp SINE Alu -2 311 1 610 294 20 7 chr17 41834207 41834353 -47670200 + MIR3 SINE MIR 16 163 -45 22 0 0 0 chr17 41834769 41834791 -47669762 + AT_rich Low_complexity Low_complexity 1 22 0 392 194 19 0 chr17 41834936 41835044 -47669509 + CT-rich Low_complexity Low_complexity 2 111 0 185 214 95 48 chr17 41836206 41836290 -47668263 - MIR SINE MIR -67 141 54 1988 142 38 0 chr17 41836399 41836687 -47667866 + AluSx SINE Alu 1 299 -13 244 307 121 52 chr17 41837203 41837434 -47667119 + L2 LINE L2 2691 2937 -377 1944 164 0 26 chr17 41837466 41837777 -47666776 + AluJb SINE Alu 1 303 -9 226 204 61 0 chr17 41838152 41838201 -47666352 - MIR SINE MIR -17 245 194 308 305 91 1 chr17 41838391 41838529 -47666024 + MIR SINE MIR 25 172 -64 1323 121 0 0 chr17 41838532 41838705 -47665848 + AluSg/x SINE Alu 125 297 -15 195 320 40 13 chr17 41838729 41838804 -47665749 + MIR SINE MIR 186 262 0 1227 242 91 18 chr17 41840366 41840751 -47663802 - MER113 DNA MER1_type? 0 521 109 753 243 159 4 chr17 41840789 41841015 -47663538 - MIR SINE MIR 0 262 2 2014 110 43 4 chr17 41841453 41841734 -47662819 - AluJb SINE Alu -20 292 1 606 77 0 0 chr17 41845029 41845107 -47659446 - AluJ/FRAM SINE Alu -9 303 226 2456 86 0 0 chr17 41845993 41846297 -47658256 - AluSx SINE Alu -8 304 1 2304 76 3 3 chr17 41846897 41847210 -47657343 + AluSp SINE Alu 1 313 0 36 40 0 0 chr17 41847288 41847338 -47657215 + AT_rich Low_complexity Low_complexity 1 50 0 677 167 25 25 chr17 41847347 41847467 -47657086 - FLAM_A SINE Alu -13 120 1 1353 155 9 18 chr17 41847814 41848033 -47656520 - AluJo SINE Alu -95 217 1 2419 83 7 0 chr17 41848278 41848578 -47655975 + AluSp SINE Alu 1 302 -11 1371 95 0 0 chr17 41848578 41848747 -47655806 + AluSg/x SINE Alu 134 302 -10 2015 134 3 29 chr17 41849455 41849769 -47654784 - AluJb SINE Alu -6 306 1 192 274 16 16 chr17 41849872 41849934 -47654619 + MIR SINE MIR 141 202 -60 290 171 0 13 chr17 41853263 41853339 -47651214 + (TG)n Simple_repeat Simple_repeat 2 76 0 199 284 216 0 chr17 41853423 41853539 -47651014 + MIR3 SINE MIR 43 183 -25 204 329 0 0 chr17 41853862 41853941 -47650612 + G-rich Low_complexity Low_complexity 1 79 0 1861 88 32 4 chr17 41855204 41855454 -47649099 + AluSx SINE Alu 39 295 -17 2268 99 13 0 chr17 41855810 41856113 -47648440 + AluSp SINE Alu 1 307 -6 244 321 22 95 chr17 41856162 41856299 -47648254 - MER91A DNA MER1_type -40 156 30 259 278 10 62 chr17 41857890 41857987 -47646566 + MIR SINE MIR 58 149 -59 277 254 154 9 chr17 41858700 41858810 -47645743 + MIR SINE MIR 16 141 -67 1217 188 114 111 chr17 41858902 41859042 -47645511 - L1MC5 LINE L1 -60 7901 7763 1669 157 68 20 chr17 41859042 41859335 -47645218 - AluJo SINE Alu -5 307 1 1217 188 114 111 chr17 41859335 41859358 -47645195 - L1MC5 LINE L1 -198 7763 7742 586 94 0 0 chr17 41859358 41859443 -47645110 + L1PA16 LINE L1 6082 6166 0 1217 188 114 111 chr17 41859443 41859891 -47644662 - L1MC5 LINE L1 -219 7742 7287 1557 132 0 9 chr17 41860026 41860254 -47644299 + AluSq SINE Alu 1 226 -87 1006 107 14 0 chr17 41910254 41910394 -47594159 + AluSp/q SINE Alu 161 302 -11 2569 54 0 0 chr17 41910725 41911022 -47593531 + AluY SINE Alu 1 297 -14 370 188 245 0 chr17 41911030 41911166 -47593387 + MIR3 SINE MIR 32 206 -2 2179 112 3 0 chr17 41911918 41912212 -47592341 - AluSq SINE Alu -16 297 3 517 171 11 0 chr17 41912212 41912300 -47592253 - AluJo/FRAM SINE Alu -15 297 209 1604 107 4 76 chr17 41912300 41912562 -47591991 - AluJo SINE Alu -69 243 1 747 166 21 201 chr17 41912642 41912925 -47591628 - MIR SINE MIR 0 262 31 227 154 29 154 chr17 41912988 41913035 -47591518 - L1MC5 LINE L1 -36 7925 7896 2389 106 0 0 chr17 41913035 41913336 -47591217 + AluSx SINE Alu 3 303 -9 227 154 29 154 chr17 41913336 41913392 -47591161 - L1MC5 LINE L1 -65 7896 7835 2022 120 0 31 chr17 41913837 41914157 -47590396 + AluSx SINE Alu 1 311 0 558 234 269 11 chr17 41914190 41914365 -47590188 - MIR SINE MIR 0 262 43 2839 91 41 2 chr17 41914690 41915107 -47589446 + L1MA4A LINE L1 5866 6298 -5 2078 164 27 38 chr17 41915340 41915815 -47588738 - L1ME2 LINE L1 -2 6162 5693 2630 85 42 7 chr17 41915816 41916226 -47588327 - L1MC3 LINE L1 0 7785 7362 553 173 7 17 chr17 41916227 41916373 -47588180 - L1ME2 LINE L1 -460 5702 5561 501 270 31 6 chr17 41916371 41916534 -47588019 - L1M4 LINE L1 -3025 3121 2955 * 660 216 163 7 chr17 41916711 41916864 -47587689 - MER5A DNA MER1_type -2 187 11 395 280 72 24 chr17 41917186 41917311 -47587242 - MER5A DNA MER1_type 0 189 59 348 24 0 0 chr17 41917373 41917414 -47587139 + (CA)n Simple_repeat Simple_repeat 2 42 0 2435 81 0 0 chr17 41917591 41917888 -47586665 + AluY SINE Alu 1 297 -14 540 351 56 36 chr17 41918020 41918410 -47586143 - L2 LINE L2 -493 2821 2424 216 289 195 21 chr17 41918447 41918637 -47585916 - L2 LINE L2 -1048 2266 2044 2601 49 3 0 chr17 41919010 41919315 -47585238 + AluY SINE Alu 1 306 -5 222 217 83 0 chr17 41920038 41920098 -47584455 - MIR SINE MIR 0 262 198 814 73 0 0 chr17 41920210 41920320 -47584233 - MER41C LTR ERV1 0 554 445 1341 169 103 15 chr17 41920955 41921286 -47583267 - L1MB7 LINE L1 0 6184 5825 743 126 0 34 chr17 41921288 41921407 -47583146 - FLAM_A SINE Alu 0 142 28 243 0 0 0 chr17 41921430 41921457 -47583096 + (A)n Simple_repeat Simple_repeat 1 27 0 976 107 29 14 chr17 41921463 41921603 -47582950 + AluJb SINE Alu 161 302 -10 591 209 131 5 chr17 41921606 41921797 -47582756 - L1MB7 LINE L1 -373 5793 5579 503 165 84 26 chr17 41921929 41922084 -47582469 - MLT1E LTR MaLR -369 198 38 1384 188 11 0 chr17 41922105 41922371 -47582182 - L1MB7 LINE L1 -597 5587 5319 255 289 0 0 chr17 41922456 41922532 -47582021 - L1MB7 LINE L1 -1014 5132 5057 576 244 99 45 chr17 41922532 41922733 -47581820 - MIR SINE MIR -31 231 20 207 167 0 0 chr17 41923536 41923578 -47580975 + CT-rich Low_complexity Low_complexity 3 44 0 313 301 151 30 chr17 41923684 41924016 -47580537 - L2 LINE L2 -910 2404 2033 202 71 0 0 chr17 41924119 41924147 -47580406 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 696 153 7 14 chr17 41924147 41924291 -47580262 + CT-rich Low_complexity Low_complexity 1 143 0 1883 158 30 7 chr17 41924308 41924606 -47579947 - AluJb SINE Alu -7 305 1 2227 124 0 0 chr17 41924866 41925164 -47579389 - AluSx SINE Alu -14 298 1 467 346 105 12 chr17 41925169 41925501 -47579052 + L2 LINE L2 2910 3272 0 2444 94 0 0 chr17 41925580 41925879 -47578674 - AluSq SINE Alu -14 299 1 261 0 0 0 chr17 41926873 41926902 -47577651 + (TG)n Simple_repeat Simple_repeat 1 29 0 2202 93 10 0 chr17 41927584 41927873 -47576680 - AluSg SINE Alu -18 292 1 537 86 0 0 chr17 41928123 41928193 -47576360 - AluJ/FRAM SINE Alu -25 287 218 2366 99 0 3 chr17 41928304 41928616 -47575937 + AluSx SINE Alu 1 311 -1 683 119 28 84 chr17 41928757 41928791 -47575762 - L1M3 LINE L1 -348 5823 5789 2255 127 0 0 chr17 41928791 41929099 -47575454 + AluSx SINE Alu 1 308 -4 683 119 28 84 chr17 41929099 41929207 -47575346 - L1M3 LINE L1 -382 5789 5689 2232 99 0 0 chr17 41929264 41929575 -47574978 - AluSx SINE Alu 0 311 1 2248 116 0 0 chr17 41931136 41931438 -47573115 - AluSc SINE Alu -7 302 1 1953 140 3 47 chr17 41931569 41931890 -47572663 - AluSx SINE Alu -5 307 1 1736 246 48 40 chr17 41932146 41933270 -47571283 - L1ME3 LINE L1 0 6239 5026 2400 100 0 0 chr17 41933271 41933571 -47570982 - AluSx SINE Alu -12 300 1 990 192 28 0 chr17 41933573 41933755 -47570798 - AluJo SINE Alu -8 304 118 206 174 22 0 chr17 41933991 41934037 -47570516 + T-rich Low_complexity Low_complexity 1 47 0 455 283 64 0 chr17 41935801 41935974 -47568579 - L1ME3 LINE L1 -3464 2751 2568 * 563 288 45 11 chr17 41935968 41936235 -47568318 - L1ME3 LINE L1 -4330 2066 1791 1980 93 62 3 chr17 41936335 41936624 -47567929 - MER41A LTR ERV1 -248 306 1 217 333 89 15 chr17 41936663 41936798 -47567755 + L2 LINE L2 2943 3087 -185 1217 143 5 11 chr17 41936922 41937111 -47567442 + AluJb SINE Alu 114 301 -11 261 258 76 0 chr17 41937113 41937179 -47567374 + L2 LINE L2 3200 3270 -2 290 65 0 22 chr17 41937346 41937392 -47567161 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 1598 193 0 44 chr17 41937960 41938276 -47566277 + AluJb SINE Alu 1 302 -10 2072 122 0 48 chr17 41938279 41938591 -47565962 + AluSx SINE Alu 1 297 -15 2412 103 0 0 chr17 41938593 41938905 -47565648 + AluSq SINE Alu 1 312 -1 180 306 126 27 chr17 41939056 41939167 -47565386 + L2 LINE L2 2940 3061 -252 543 222 99 6 chr17 41939225 41939289 -47565264 + MER5B DNA MER1_type 2 59 -119 2296 108 0 0 chr17 41939289 41939586 -47564967 + AluSx SINE Alu 1 297 -15 543 222 99 6 chr17 41939586 41939683 -47564870 + MER5B DNA MER1_type 59 178 0 1212 94 0 25 chr17 41939815 41939975 -47564578 - AluSg/x SINE Alu -19 291 136 462 319 111 60 chr17 41939979 41940317 -47564236 + L2 LINE L2 1832 2151 -1163 1727 147 41 3 chr17 41940317 41940610 -47563943 - AluJo SINE Alu -8 304 1 462 319 111 60 chr17 41940610 41940892 -47563661 + L2 LINE L2 2151 2484 -830 2449 97 0 0 chr17 41941036 41941344 -47563209 + AluSx SINE Alu 1 308 -4 1191 109 0 0 chr17 41941344 41941500 -47563053 + AluSx SINE Alu 1 156 -156 2030 107 0 4 chr17 41941548 41941841 -47562712 + AluSg SINE Alu 22 313 0 1297 105 0 0 chr17 41941841 41942013 -47562540 + AluSq SINE Alu 131 302 -11 219 350 88 21 chr17 41942196 41942390 -47562163 + L2 LINE L2 2858 3064 -208 595 203 59 0 chr17 41942871 41942989 -47561564 - MIR3 SINE MIR -12 196 72 927 137 0 0 chr17 41943457 41943581 -47560972 + FLAM_C SINE Alu 1 124 -19 527 308 93 14 chr17 41945111 41945325 -47559228 - L3 LINE CR1 -56 1521 1291 230 389 9 0 chr17 41945345 41945453 -47559100 - L3 LINE CR1 -413 1164 1056 664 241 69 34 chr17 41946338 41946437 -47558116 + L1ME LINE L1 4984 5078 -1068 1775 194 3 10 chr17 41946437 41946741 -47557812 - AluJo SINE Alu -9 303 2 664 241 69 34 chr17 41946741 41946903 -47557650 + L1ME LINE L1 5078 5254 -892 1138 123 0 13 chr17 41946911 41947066 -47557487 + AluSx SINE Alu 1 153 -159 1224 199 20 76 chr17 41947078 41947136 -47557417 + L1ME LINE L1 5272 5332 -830 2242 112 23 0 chr17 41947136 41947441 -47557112 + AluSx SINE Alu 1 312 0 1224 199 20 76 chr17 41947441 41947775 -47556778 + L1ME LINE L1 5332 5642 -520 311 179 0 132 chr17 41947817 41947923 -47556630 - L1MC4 LINE L1 -1339 6703 6612 306 226 9 66 chr17 41947905 41948011 -47556542 - L1MC4 LINE L1 -1339 6703 6604 * 418 113 57 40 chr17 41948096 41948273 -47556280 + (TA)n Simple_repeat Simple_repeat 1 180 0 180 0 0 0 chr17 41948396 41948416 -47556137 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 2292 91 7 29 chr17 41948417 41948726 -47555827 - AluSx SINE Alu -10 302 1 2481 70 3 0 chr17 41949070 41949368 -47555185 + AluSp SINE Alu 1 299 -14 991 128 6 32 chr17 41950038 41950194 -47554359 - AluJb SINE Alu -9 303 152 2051 164 0 0 chr17 41950253 41950558 -47553995 - AluJo SINE Alu -7 305 1 2472 73 13 0 chr17 41950636 41950937 -47553616 - AluY SINE Alu -6 305 1 316 287 62 39 chr17 41952466 41952595 -47551958 - L1ME3A LINE L1 -2 6168 6037 1904 82 3 64 chr17 41953200 41953482 -47551071 - AluSp SINE Alu -48 265 1 1308 161 0 36 chr17 41953529 41953752 -47550801 - AluJb SINE Alu -30 282 68 7729 128 124 33 chr17 41953755 41954377 -47550176 - pTR5 LTR ERV1 0 2438 1874 3640 47 2 5 chr17 41954377 41954826 -47549727 + LTR7 LTR ERV1 1 448 -2 7729 128 124 33 chr17 41954826 41955752 -47548801 - pTR5 LTR ERV1 -564 1874 749 452 136 0 0 chr17 41955752 41955818 -47548735 - AluJb SINE Alu -235 77 12 354 255 28 57 chr17 41955867 41955973 -47548580 - MIR SINE MIR -88 120 18 361 269 43 43 chr17 41956292 41956433 -47548120 + L1ME LINE L1 5505 5645 -525 2251 117 0 10 chr17 41956504 41956804 -47547749 - AluSx SINE Alu -15 297 1 755 229 148 0 chr17 41956804 41957014 -47547539 + MER58B DNA MER1_type 77 317 -24 256 246 43 72 chr17 41957036 41957069 -47547484 + L1ME LINE L1 5663 5695 -475 1884 152 9 25 chr17 41957069 41957247 -47547306 - AluJb SINE Alu -1 311 139 2386 111 0 0 chr17 41957247 41957553 -47547000 - AluSx SINE Alu -6 306 1 1884 152 9 25 chr17 41957553 41957690 -47546863 - AluJb SINE Alu -173 139 1 256 246 43 72 chr17 41957690 41957794 -47546759 + L1ME LINE L1 5695 5796 -374 2313 109 3 3 chr17 41958704 41959015 -47545538 - AluSx SINE Alu -1 311 1 1855 138 3 69 chr17 41959031 41959217 -47545336 - AluJo SINE Alu -1 311 155 2420 80 0 7 chr17 41959217 41959517 -47545036 - AluSg SINE Alu -12 298 1 1855 138 3 69 chr17 41959517 41959663 -47544890 - AluJo SINE Alu -157 155 1 2101 142 7 0 chr17 41960045 41960354 -47544199 - AluSx SINE Alu -1 311 1 2348 95 23 0 chr17 41961135 41961441 -47543112 - AluSq SINE Alu 0 313 1 279 0 0 0 chr17 41961897 41961928 -47542625 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 2074 136 0 0 chr17 41961929 41962216 -47542337 - AluSx SINE Alu -25 287 1 26 50 0 0 chr17 41962221 41962261 -47542292 + AT_rich Low_complexity Low_complexity 1 40 0 427 179 13 0 chr17 41962274 41962352 -47542201 - LTR47A LTR ERVL 0 452 374 242 222 0 0 chr17 41962352 41962406 -47542147 + AluJ/monomer SINE Alu 1 54 -249 1542 119 5 0 chr17 41962506 41962716 -47541837 + AluSq SINE Alu 103 313 0 467 77 0 0 chr17 41962749 41962814 -47541739 - LTR47A LTR ERVL -63 389 325 2061 131 35 35 chr17 41962992 41963367 -47541186 + THE1C LTR MaLR 1 375 0 867 142 0 40 chr17 41963482 41963630 -47540923 - FLAM_C SINE Alu -1 142 1 472 265 68 31 chr17 41963695 41963857 -47540696 + MIR3 SINE MIR 2 169 -39 2271 118 7 0 chr17 41964059 41964363 -47540190 + AluSx SINE Alu 1 306 -6 760 154 97 80 chr17 41964605 41964694 -47539859 + MER45A DNA AcHobo 1 87 -1494 2129 96 24 10 chr17 41964694 41964987 -47539566 - AluSq SINE Alu -16 297 1 760 154 97 80 chr17 41964987 41965072 -47539481 + MER45A DNA AcHobo 87 178 0 191 89 0 71 chr17 41965780 41965836 -47538717 + (CCCCG)n Simple_repeat Simple_repeat 2 53 0 321 248 25 50 chr17 41965848 41966009 -47538544 + C-rich Low_complexity Low_complexity 5 161 0 * 406 245 16 49 chr17 41965927 41966111 -47538442 + (CCCCAG)n Simple_repeat Simple_repeat 1 178 0 4234 199 55 47 chr17 41966235 41966375 -47538178 + MER21-int LTR ERV1 2861 2998 -1193 2189 135 3 0 chr17 41966375 41966678 -47537875 - AluSx SINE Alu -8 304 1 2022 133 0 45 chr17 41966680 41966989 -47537564 - AluJb SINE Alu -17 295 1 4234 199 55 47 chr17 41966989 41967878 -47536675 + MER21-int LTR ERV1 2998 3902 -289 572 232 52 76 chr17 41967883 41968094 -47536459 + MER21B LTR ERV1 511 716 -147 2066 134 7 10 chr17 41968097 41968402 -47536151 + AluSq SINE Alu 1 304 -9 258 70 23 0 chr17 41968480 41968523 -47536030 + L1ME4a LINE L1 6074 6117 -4 21 0 0 0 chr17 41968914 41968935 -47535618 + AT_rich Low_complexity Low_complexity 1 21 0 2502 83 0 0 chr17 41969057 41969357 -47535196 + AluSx SINE Alu 8 307 -5 2356 88 27 0 chr17 41970480 41970777 -47533776 + AluSp SINE Alu 1 305 -8 1003 175 80 5 chr17 41970940 41971140 -47533413 + MER58C DNA MER1_type 1 215 0 225 0 0 0 chr17 41971229 41971254 -47533299 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 367 155 0 0 chr17 41971952 41972010 -47532543 + LTR8 LTR ERV1 634 691 0 2217 99 20 0 chr17 41972458 41972750 -47531803 + AluSx SINE Alu 1 298 -14 275 295 84 0 chr17 41973378 41973473 -47531080 - L3 LINE CR1 -185 1392 1290 555 106 0 0 chr17 41973493 41973578 -47530975 - AluJ/FRAM SINE Alu 0 312 228 2239 96 3 3 chr17 41973683 41973975 -47530578 + AluSx SINE Alu 1 292 -20 265 265 121 0 chr17 41974450 41974533 -47530020 - MIR SINE MIR -66 142 50 335 230 132 75 chr17 41974973 41975147 -47529406 - MIR SINE MIR -43 219 36 216 67 0 0 chr17 41975215 41975245 -47529308 + (TCCCC)n Simple_repeat Simple_repeat 2 31 0 1465 111 5 0 chr17 41975679 41975868 -47528685 - AluSp SINE Alu -15 298 109 872 104 17 0 chr17 41975945 41976060 -47528493 - AluSq/x SINE Alu -195 117 1 304 257 10 59 chr17 41977018 41977119 -47527434 + L1MC4 LINE L1 6614 6709 -1333 979 170 11 16 chr17 41977249 41977431 -47527122 - AluJb SINE Alu -131 181 1 1383 224 106 17 chr17 41977432 41977915 -47526638 + L1ME3 LINE L1 5637 6162 0 1716 252 42 54 chr17 41978265 41978791 -47525762 + L2 LINE L2 1683 2203 -1111 2135 115 0 7 chr17 41978791 41979086 -47525467 + AluSg SINE Alu 1 293 -17 1716 252 42 54 chr17 41979086 41979154 -47525399 + L2 LINE L2 2203 2270 -1044 418 314 52 16 chr17 41979206 41979400 -47525153 + L2 LINE L2 3113 3313 0 575 219 95 102 chr17 41979639 41979656 -47524897 - MER20B DNA MER1_type -116 667 651 2275 113 7 0 chr17 41979656 41979957 -47524596 + AluSp SINE Alu 1 303 -10 2308 80 7 0 chr17 41979957 41980243 -47524310 + AluSg SINE Alu 8 295 -15 575 219 95 102 chr17 41980243 41980644 -47523909 - MER20B DNA MER1_type -130 653 251 216 292 0 15 chr17 41980703 41980768 -47523785 - L2 LINE L2 -217 3055 2992 213 245 69 39 chr17 41980768 41980870 -47523683 - L2 LINE L2 -878 2436 2332 285 314 108 0 chr17 41981036 41981138 -47523415 - L2 LINE L2 -576 2738 2626 493 118 0 59 chr17 41981752 41981837 -47522716 + AluSp SINE Alu 114 193 -120 227 97 0 105 chr17 41982060 41982184 -47522369 + (TATATG)n Simple_repeat Simple_repeat 1 111 0 324 94 0 0 chr17 41982284 41982337 -47522216 + (CA)n Simple_repeat Simple_repeat 2 54 0 210 322 40 79 chr17 41982494 41982646 -47521907 - L2 LINE L2 -49 3223 3078 282 309 55 27 chr17 41983423 41983533 -47521020 - L2 LINE L2 -24 3248 3136 902 122 0 23 chr17 41984475 41984606 -47519947 + AluJo/FLAM SINE Alu 2 129 -173 2324 86 3 3 chr17 41984606 41984898 -47519655 - AluSq SINE Alu -21 292 1 1932 125 28 0 chr17 41984898 41985187 -47519366 - AluSx SINE Alu -15 297 1 183 80 0 0 chr17 41986710 41986735 -47517818 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 2064 109 7 0 chr17 41986790 41987084 -47517469 + AluSx SINE Alu 1 296 -16 224 289 22 33 chr17 41987335 41987425 -47517128 + L2 LINE L2 3003 3091 -181 1341 59 6 0 chr17 41987900 41988069 -47516484 - AluSp SINE Alu -11 302 133 1633 137 8 19 chr17 41988177 41988439 -47516114 - AluJb SINE Alu -53 259 1 2023 248 14 104 chr17 41988440 41988650 -47515903 - L1ME LINE L1 -4609 1652 1425 797 148 31 0 chr17 41988650 41988778 -47515775 - FLAM_C SINE Alu -1 132 1 2023 248 14 104 chr17 41988778 41988836 -47515717 - L1ME LINE L1 -4836 1425 1363 2241 87 3 16 chr17 41988836 41989146 -47515407 - AluY SINE Alu -5 306 1 2023 248 14 104 chr17 41989146 41990035 -47514518 - L1ME LINE L1 -4898 1363 553 1648 190 10 0 chr17 41990035 41990335 -47514218 - AluJo SINE Alu -9 303 1 2023 248 14 104 chr17 41990335 41990349 -47514204 - L1ME LINE L1 -5708 553 539 693 191 66 0 chr17 41990785 41990921 -47513632 - AluJo/FRAM SINE Alu -9 303 159 1443 164 0 8 chr17 41990921 41991165 -47513388 - AluJb SINE Alu -70 242 1 570 204 122 86 chr17 41991188 41991246 -47513307 - L1ME LINE L1 -5534 536 482 415 237 165 0 chr17 41991246 41991343 -47513210 + MER81 DNA DNA 1 113 -1 570 204 122 86 chr17 41991343 41991505 -47513048 - L1ME LINE L1 -5588 482 308 513 244 8 23 chr17 41991589 41991720 -47512833 - L1ME LINE L1 -5940 130 2 1853 149 7 0 chr17 41992099 41992394 -47512159 + AluJb SINE Alu 1 297 -15 1127 226 186 0 chr17 41992816 41992967 -47511586 + L1MC4 LINE L1 6458 6580 -1462 1818 138 50 3 chr17 41992967 41993265 -47511288 + AluJo SINE Alu 1 312 0 1127 226 186 0 chr17 41993265 41993441 -47511112 + L1MC4 LINE L1 6580 6846 -1196 1103 155 0 58 chr17 41993443 41993649 -47510904 + AluSx SINE Alu 5 198 -114 914 196 31 10 chr17 41993654 41993848 -47510705 + L1MC4 LINE L1 6869 7066 -976 244 213 0 67 chr17 41993908 41993983 -47510570 + L1MC4a LINE L1 7140 7209 -599 777 112 8 16 chr17 41994163 41994288 -47510265 + AluSx SINE Alu 186 309 -1 1276 265 23 64 chr17 41994801 41995078 -47509475 + L2 LINE L2 2895 3149 -164 1755 98 39 0 chr17 41995078 41995333 -47509220 - AluSp SINE Alu -9 304 40 1276 265 23 64 chr17 41995333 41995492 -47509061 + L2 LINE L2 3149 3313 0 1486 162 42 32 chr17 41995542 41995690 -47508863 + MER58B DNA MER1_type 28 173 -2247 1788 150 3 16 chr17 41995690 41995997 -47508556 + AluSg SINE Alu 1 303 -7 1486 162 42 32 chr17 41995997 41996158 -47508395 + MER58B DNA MER1_type 173 341 0 239 322 11 0 chr17 41998391 41998478 -47506075 + MIR SINE MIR 58 145 -117 2089 100 0 7 chr17 41998600 41998925 -47505628 - AluSx SINE Alu 0 312 1 1846 124 21 0 chr17 41998927 41999210 -47505343 - AluJo SINE Alu -23 289 1 342 45 0 0 chr17 42000504 42000548 -47504005 + (TG)n Simple_repeat Simple_repeat 2 45 0 541 288 26 34 chr17 42001519 42001752 -47502801 + L2 LINE L2 3042 3272 0 1310 154 63 42 chr17 42004664 42004949 -47499604 + AluJb SINE Alu 1 291 -21 1770 128 0 92 chr17 42004953 42005281 -47499272 + AluSx SINE Alu 6 303 -9 285 276 90 11 chr17 42005330 42005505 -47499048 - MLT1J LTR MaLR -331 180 91 647 249 30 35 chr17 42005664 42005833 -47498720 - MER5B DNA MER1_type -6 172 5 432 235 0 87 chr17 42006540 42006655 -47497898 + MER45A DNA AcHobo 1 105 -73 1516 148 24 114 chr17 42006655 42006987 -47497566 - AluJb SINE Alu 0 302 1 1702 170 0 7 chr17 42006993 42007287 -47497266 - AluSx SINE Alu -19 293 2 2028 132 0 7 chr17 42007314 42007624 -47496929 + AluSx SINE Alu 3 310 -2 235 169 11 157 chr17 42007624 42007713 -47496840 + MER45A DNA AcHobo 103 178 0 439 277 132 6 chr17 42007998 42008157 -47496396 + MIR3 SINE MIR 30 208 0 184 275 29 43 chr17 42011187 42011256 -47493297 - L2 LINE L2 -20 3293 3226 2164 76 14 3 chr17 42011364 42011653 -47492900 - AluSc SINE Alu -17 292 1 1292 103 10 5 chr17 42012063 42012257 -47492296 + AluSg/x SINE Alu 107 301 -9 4023 66 45 2 chr17 42013458 42013971 -47490582 + LTR8 LTR ERV1 1 535 -156 1588 162 3 69 chr17 42015029 42015363 -47489190 + AluSx SINE Alu 1 312 0 1584 149 73 14 chr17 42015366 42015654 -47488899 + AluSx SINE Alu 1 305 -7 2247 96 0 0 chr17 42016199 42016500 -47488053 + AluSc SINE Alu 1 301 -8 1900 118 29 10 chr17 42016515 42016821 -47487732 + AluSx SINE Alu 1 312 0 2056 109 0 26 chr17 42016955 42017266 -47487287 + AluSx SINE Alu 1 303 -9 27 81 0 0 chr17 42017779 42017841 -47486712 + AT_rich Low_complexity Low_complexity 1 62 0 800 96 70 0 chr17 42017978 42018093 -47486460 + FRAM SINE Alu 44 166 -10 1663 150 11 3 chr17 42020905 42021192 -47483361 + AluSx SINE Alu 1 289 -23 2037 121 3 7 chr17 42021233 42021539 -47483014 + AluSx SINE Alu 1 305 -7 2238 84 14 0 chr17 42021547 42021875 -47482678 + AluSx SINE Alu 6 337 0 335 241 9 74 chr17 42022204 42022312 -47482241 - L2 LINE L2 -222 3050 2950 2390 139 49 40 chr17 42025036 42025488 -47479065 - L1MC3 LINE L1 -126 7659 7204 304 230 23 11 chr17 42025497 42025584 -47478969 - MLT1F1 LTR MaLR -443 124 37 2225 84 3 3 chr17 42025745 42026042 -47478511 - AluSg SINE Alu -13 297 1 373 286 67 51 chr17 42030466 42030644 -47473909 + L2 LINE L2 3084 3264 -8 24 0 0 0 chr17 42030695 42030719 -47473834 + AT_rich Low_complexity Low_complexity 1 24 0 2096 128 0 32 chr17 42030866 42031210 -47473343 - L1PA16 LINE L1 -23 6143 5811 1101 151 103 135 chr17 42031476 42031788 -47472765 - AluJo SINE Alu 0 302 1 222 289 0 0 chr17 42031858 42031910 -47472643 + L2 LINE L2 3210 3261 -11 1872 129 0 45 chr17 42032049 42032359 -47472194 + AluJb SINE Alu 1 296 -16 30 0 0 0 chr17 42032417 42032447 -47472106 + AT_rich Low_complexity Low_complexity 1 30 0 27 62 0 0 chr17 42032580 42032628 -47471925 + AT_rich Low_complexity Low_complexity 1 48 0 1599 153 16 42 chr17 42032629 42032937 -47471616 + AluJb SINE Alu 1 300 -12 1046 112 0 0 chr17 42033080 42033232 -47471321 + AluSg/x SINE Alu 154 305 -7 799 169 0 22 chr17 42033426 42033562 -47470991 - FLAM_C SINE Alu 0 133 1 740 162 15 15 chr17 42033754 42033890 -47470663 - FLAM_A SINE Alu -1 141 6 246 297 16 0 chr17 42033922 42033986 -47470567 + L2 LINE L2 3208 3272 0 217 0 0 0 chr17 42034905 42034929 -47469624 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2347 82 0 0 chr17 42034929 42035208 -47469345 - AluSq SINE Alu -28 285 7 2759 261 75 73 chr17 42035369 42035844 -47468709 - L1M4 LINE L1 -1218 4928 4455 2270 92 14 0 chr17 42035844 42036137 -47468416 - AluSp SINE Alu -16 297 1 2759 261 75 73 chr17 42036137 42036609 -47467944 - L1M4 LINE L1 -1691 4455 3985 2287 122 3 0 chr17 42036609 42036920 -47467633 - AluSx SINE Alu 0 312 1 2759 261 75 73 chr17 42036920 42037340 -47467213 - L1M4 LINE L1 -2161 3985 3567 2191 134 3 0 chr17 42037340 42037639 -47466914 - AluSx SINE Alu -12 300 1 2759 261 75 73 chr17 42037639 42037689 -47466864 - L1M4 LINE L1 -2579 3567 3519 2381 90 0 0 chr17 42037689 42038011 -47466542 - AluY SINE Alu 0 311 1 2759 261 75 73 chr17 42038011 42038221 -47466332 - L1M4 LINE L1 -2627 3519 3311 2105 150 0 7 chr17 42038221 42038528 -47466025 + AluSx SINE Alu 1 305 -7 2759 261 75 73 chr17 42038528 42038951 -47465602 - L1M4 LINE L1 -2835 3311 2870 1640 148 3 85 chr17 42038957 42039275 -47465278 + AluJb SINE Alu 1 292 -20 1894 149 10 21 chr17 42039291 42039579 -47464974 + AluJo SINE Alu 1 285 -27 301 323 46 99 chr17 42039602 42040036 -47464517 - L1MEd LINE L1 -5488 631 221 2020 104 0 4 chr17 42040244 42040512 -47464041 + AluSq SINE Alu 1 267 -46 438 20 0 0 chr17 42040521 42040572 -47463981 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 424 216 102 60 chr17 42040639 42040806 -47463747 - HAL1 LINE L1 -2333 174 1 342 293 121 6 chr17 42041187 42041361 -47463192 - MER117 DNA MER1_type 0 197 4 805 199 47 6 chr17 42042795 42042966 -47461587 + MER5B DNA MER1_type 1 178 0 337 273 88 21 chr17 42043546 42043595 -47460958 - MIR3 SINE MIR -34 174 130 2030 93 3 84 chr17 42043595 42043906 -47460647 + AluSx SINE Alu 1 286 -26 219 36 0 0 chr17 42043906 42043934 -47460619 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 337 273 88 21 chr17 42043934 42044048 -47460505 - MIR3 SINE MIR -77 131 2 2460 99 3 0 chr17 42044541 42044853 -47459700 - AluSq SINE Alu 0 313 1 552 291 56 15 chr17 42045246 42045442 -47459111 - MIR SINE MIR -48 214 11 258 204 0 0 chr17 42045441 42045490 -47459063 - L2 LINE L2 -5 3267 3219 * 864 98 15 23 chr17 42045589 42045722 -47458831 + FLAM_C SINE Alu 1 132 -1 1124 136 0 4 chr17 42046298 42046519 -47458034 + AluSx SINE Alu 2 304 -8 644 222 111 19 chr17 42046534 42046750 -47457803 - MIR SINE MIR -7 255 20 22 0 0 0 chr17 42047166 42047188 -47457365 + AT_rich Low_complexity Low_complexity 1 22 0 2205 106 0 64 chr17 42047197 42047527 -47457026 + AluSq SINE Alu 5 313 0 684 85 0 19 chr17 42048035 42048141 -47456412 + AluSg/x SINE Alu 209 312 0 28 0 0 0 chr17 42048388 42048416 -47456137 + AT_rich Low_complexity Low_complexity 1 28 0 418 304 40 34 chr17 42048833 42048981 -47455572 + MIR SINE MIR 20 168 -94 1799 142 6 28 chr17 42048997 42049314 -47455239 + AluSx SINE Alu 1 310 -2 1957 104 43 21 chr17 42049519 42049798 -47454755 + AluSx SINE Alu 6 290 -22 1535 118 4 41 chr17 42050175 42050416 -47454137 + L1MC3 LINE L1 7352 7583 -202 2393 83 7 3 chr17 42050416 42050716 -47453837 + AluSq SINE Alu 1 301 -12 1535 118 4 41 chr17 42050716 42050745 -47453808 + L1MC3 LINE L1 7583 7612 -173 2374 96 3 7 chr17 42050770 42051073 -47453480 - AluSx SINE Alu -10 302 1 1094 104 0 0 chr17 42051073 42051208 -47453345 - AluSq/x SINE Alu -177 135 1 572 289 56 48 chr17 42052147 42052217 -47452336 - MIR SINE MIR -10 252 184 2332 82 0 26 chr17 42052217 42052522 -47452031 - AluY SINE Alu -10 301 5 572 289 56 48 chr17 42052522 42052700 -47451853 - MIR SINE MIR -78 184 2 917 224 160 52 chr17 42053350 42053738 -47450815 + LTR7 LTR ERV1 1 430 -20 2479 66 0 20 chr17 42054613 42054916 -47449637 - AluY SINE Alu -14 297 1 221 225 0 0 chr17 42058845 42058885 -47445668 + polypurine Low_complexity Low_complexity 3 42 0 192 293 141 10 chr17 42061898 42061997 -47442556 - MIR SINE MIR -117 145 34 260 255 255 25 chr17 42062367 42062524 -47442029 + MIR SINE MIR 20 212 -50 211 347 40 45 chr17 42063216 42063392 -47441161 - L3 LINE CR1 -408 1169 995 482 333 104 26 chr17 42063597 42063948 -47440605 + L1ME4a LINE L1 5519 5904 -217 486 184 80 145 chr17 42063961 42064035 -47440518 + L1MC5 LINE L1 7395 7472 -489 2123 123 43 3 chr17 42064035 42064335 -47440218 + AluJb SINE Alu 1 312 0 486 184 80 145 chr17 42064335 42064453 -47440100 + L1MC5 LINE L1 7472 7596 -365 2281 124 0 3 chr17 42064453 42064759 -47439794 + AluSx SINE Alu 1 305 -7 486 184 80 145 chr17 42064759 42064887 -47439666 + L1MC5 LINE L1 7596 7731 -230 2451 88 0 0 chr17 42064887 42065183 -47439370 + AluSq SINE Alu 1 296 -17 2295 103 3 7 chr17 42065192 42065494 -47439059 + AluSg SINE Alu 1 301 -9 486 184 80 145 chr17 42065494 42065574 -47438979 + L1MC5 LINE L1 7739 7780 -181 2530 81 0 3 chr17 42066163 42066473 -47438080 - AluSx SINE Alu -3 309 1 2019 149 0 19 chr17 42067281 42067590 -47436963 + AluJb SINE Alu 1 303 -9 1832 126 0 54 chr17 42067610 42067904 -47436649 + AluSx SINE Alu 18 295 -17 21 0 0 0 chr17 42069868 42069889 -47434664 + GC_rich Low_complexity Low_complexity 1 21 0 316 128 234 32 chr17 42071469 42071563 -47432990 + MIR SINE MIR 120 232 -30 375 311 147 18 chr17 42071660 42071914 -47432639 - L1ME LINE L1 -356 5765 5545 2344 82 3 0 chr17 42071914 42072206 -47432347 - AluSx SINE Alu -15 297 5 375 311 147 18 chr17 42072206 42072347 -47432206 - L1ME LINE L1 -576 5545 5319 2639 49 3 3 chr17 42072797 42073104 -47431449 + AluY SINE Alu 1 307 -4 345 135 0 0 chr17 42073748 42073800 -47430753 + Alu SINE Alu 1 52 -251 1747 145 3 89 chr17 42073800 42074125 -47430428 + AluJb SINE Alu 4 300 -12 442 267 200 0 chr17 42074128 42074308 -47430245 + MIR SINE MIR 25 240 -22 1714 182 7 7 chr17 42074977 42075274 -47429279 - AluJo SINE Alu -15 297 1 298 237 40 0 chr17 42075298 42075374 -47429179 + L2 LINE L2 3226 3304 -9 407 253 169 68 chr17 42075827 42076064 -47428489 + MIR SINE MIR 2 262 0 1720 170 28 7 chr17 42076243 42076526 -47428027 - AluJb SINE Alu -23 289 1 749 194 0 0 chr17 42076531 42076660 -47427893 - FLAM_A SINE Alu -4 129 1 2812 163 26 32 chr17 42076674 42076704 -47427849 - L1MB7 LINE L1 -41 6143 6114 2171 116 7 3 chr17 42076704 42076997 -47427556 + AluSc SINE Alu 1 294 -15 2812 163 26 32 chr17 42076997 42077532 -47427021 - L1MB7 LINE L1 -70 6114 5581 751 282 160 1 chr17 42077982 42078481 -47426072 + L2 LINE L2 2714 3291 -22 805 173 0 0 chr17 42079107 42079240 -47425313 - FLAM_C SINE Alu 0 133 1 509 218 53 8 chr17 42079338 42079471 -47425082 - FLAM_C SINE Alu -1 142 4 1089 160 23 0 chr17 42080029 42080204 -47424349 - AluSg/x SINE Alu 0 312 134 2324 96 3 10 chr17 42080204 42080518 -47424035 - AluSx SINE Alu 0 312 1 1775 151 57 0 chr17 42080821 42081100 -47423453 + AluJo SINE Alu 1 295 -17 210 250 21 0 chr17 42081522 42081570 -47422983 - MER5A DNA MER1_type -113 76 28 1916 169 26 5 chr17 42082063 42082441 -47422112 - MLT1B LTR MaLR -4 386 1 2326 105 0 7 chr17 42084899 42085204 -47419349 + AluSx SINE Alu 1 303 -9 255 224 0 0 chr17 42087289 42087338 -47417215 + Tigger1 DNA MER2_type 27 75 -2343 2211 118 0 0 chr17 42087338 42087635 -47416918 + AluSx SINE Alu 1 297 -15 7724 116 12 51 chr17 42087637 42087863 -47416690 + Tigger1 DNA MER2_type 61 294 -2124 2166 109 7 0 chr17 42087863 42088157 -47416396 + AluSx SINE Alu 1 296 -16 7724 116 12 51 chr17 42088157 42088337 -47416216 + Tigger1 DNA MER2_type 294 479 -1939 1779 154 10 20 chr17 42088337 42088642 -47415911 + AluJb SINE Alu 1 302 -10 7724 116 12 51 chr17 42088642 42088813 -47415740 + Tigger1 DNA MER2_type 479 655 -1763 2251 94 10 0 chr17 42088813 42089101 -47415452 + AluSq SINE Alu 1 291 -22 1567 138 0 4 chr17 42089110 42089341 -47415212 + AluSg/x SINE Alu 71 300 -10 7724 116 12 51 chr17 42089341 42090029 -47414524 + Tigger1 DNA MER2_type 663 1289 -1129 944 133 7 0 chr17 42090035 42090170 -47414383 - AluSg/x SINE Alu -43 269 134 1725 111 71 4 chr17 42090170 42090450 -47414103 + Tigger1 DNA MER2_type 1294 1592 -826 981 127 0 0 chr17 42090452 42090586 -47413967 + AluSq/x SINE Alu 1 134 -178 2242 98 3 0 chr17 42090693 42090980 -47413573 - AluSx SINE Alu -24 288 1 917 93 93 128 chr17 42090980 42091072 -47413481 + Tigger1 DNA MER2_type 2222 2316 -102 1960 125 7 20 chr17 42091072 42091367 -47413186 - AluJb SINE Alu -19 293 3 917 93 93 128 chr17 42091367 42091478 -47413075 + Tigger1 DNA MER2_type 2316 2418 0 2687 74 59 135 chr17 42091978 42092467 -47412086 - MLT2A2 LTR ERVL 0 453 2 2322 106 0 7 chr17 42092906 42093207 -47411346 - AluSx SINE Alu -13 299 1 2100 117 3 0 chr17 42093258 42093563 -47410990 - AluSx SINE Alu 0 306 1 799 191 0 0 chr17 42093717 42093853 -47410700 + FLAM_C SINE Alu 5 140 -3 1845 149 3 20 chr17 42093971 42094103 -47410450 + AluJb SINE Alu 2 135 -177 2389 83 0 0 chr17 42094103 42094393 -47410160 + AluY SINE Alu 1 290 -21 2069 111 3 17 chr17 42094394 42094691 -47409862 + AluSc SINE Alu 1 293 -16 1845 149 3 20 chr17 42094691 42094857 -47409696 + AluJb SINE Alu 134 297 -15 993 132 102 56 chr17 42094886 42095083 -47409470 - MSTA LTR MaLR 0 428 223 4227 135 38 9 chr17 42095186 42095921 -47408632 - L1MC3 LINE L1 -1764 6021 5266 234 189 0 0 chr17 42095932 42096012 -47408541 - Alu SINE Alu 0 330 251 1234 276 54 30 chr17 42096069 42096968 -47407585 + L1MEc LINE L1 1847 2719 -3496 6839 224 29 10 chr17 42097090 42098739 -47405814 - L1M4 LINE L1 -945 5201 3522 1852 205 22 46 chr17 42098790 42099248 -47405305 + MLT1D LTR MaLR 1 447 -58 465 116 0 0 chr17 42099250 42099319 -47405234 - FLAM_C SINE Alu -5 138 70 207 0 0 0 chr17 42099352 42099375 -47405178 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2381 219 19 53 chr17 42099375 42099434 -47405119 - L1M4 LINE L1 -2611 3535 3476 2275 100 0 22 chr17 42099434 42099753 -47404800 + AluSx SINE Alu 1 312 0 2381 219 19 53 chr17 42099753 42100461 -47404092 - L1M4 LINE L1 -2670 3476 2794 2260 82 10 16 chr17 42100482 42100785 -47403768 - AluSg SINE Alu -9 301 1 541 86 86 0 chr17 42100812 42100893 -47403660 + FLAM_A SINE Alu 35 122 -20 1811 235 37 9 chr17 42100921 42101380 -47403173 - L1M4 LINE L1 -3410 2736 2265 1058 128 115 111 chr17 42101543 42101575 -47402978 - MER46A DNA MER2_type -2495 236 206 1235 178 174 15 chr17 42101575 42101834 -47402719 + AluJo SINE Alu 1 300 -2 1058 128 115 111 chr17 42101834 42102036 -47402517 - MER46A DNA MER2_type -2525 206 1 5373 88 8 43 chr17 42102241 42102489 -47402064 - L1PB3 LINE L1 -3 6151 5896 248 0 31 0 chr17 42102489 42102521 -47402032 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 1698 171 7 4 chr17 42102522 42102803 -47401750 - AluJb SINE Alu -30 282 1 2095 140 13 0 chr17 42102813 42103121 -47401432 - AluSx SINE Alu 0 312 1 5373 88 8 43 chr17 42103121 42103338 -47401215 - L1PB3 LINE L1 -267 5887 5664 1808 167 3 10 chr17 42103338 42103638 -47400915 + AluJb SINE Alu 1 298 -14 5373 88 8 43 chr17 42103638 42103957 -47400596 - L1PB3 LINE L1 -490 5664 5381 430 194 69 125 chr17 42103957 42103987 -47400566 + MER106A DNA MER1_type 86 116 -120 2078 131 7 0 chr17 42103987 42104278 -47400275 + AluSx SINE Alu 3 295 -17 430 194 69 125 chr17 42104278 42104407 -47400146 + MER106A DNA MER1_type 116 236 0 233 281 35 0 chr17 42104490 42104547 -47400006 + L3 LINE CR1 1504 1562 -15 1430 138 17 30 chr17 42104779 42105011 -47399542 - AluJo SINE Alu -1 311 83 227 288 62 0 chr17 42105011 42105091 -47399462 + MIR3 SINE MIR 103 187 -21 2070 137 0 20 chr17 42105320 42105626 -47398927 + AluJb SINE Alu 1 300 -12 1784 154 0 56 chr17 42105626 42105930 -47398623 + AluSx SINE Alu 1 288 -24 2305 93 3 3 chr17 42106245 42106545 -47398008 - AluSx SINE Alu -12 300 1 1829 111 104 7 chr17 42107470 42107750 -47396803 - AluSq SINE Alu -6 307 1 1283 221 69 74 chr17 42107932 42108325 -47396228 - LTR41 LTR ERVL -6 767 377 2097 113 28 0 chr17 42108332 42108623 -47395930 + AluSq SINE Alu 1 299 -14 900 191 204 0 chr17 42108668 42108888 -47395665 - LTR41 LTR ERVL -508 265 1 1853 150 14 10 chr17 42108964 42109257 -47395296 - AluJo SINE Alu -18 294 1 2231 109 0 0 chr17 42109505 42109811 -47394742 + AluSx SINE Alu 1 306 0 3408 266 16 40 chr17 42109851 42110875 -47393678 - ERVL LTR ERVL -319 5353 4377 2376 88 7 13 chr17 42111139 42111445 -47393108 + AluSq SINE Alu 1 304 -9 484 257 103 46 chr17 42111521 42111739 -47392814 - MIR SINE MIR -28 234 3 2314 104 10 0 chr17 42111962 42112269 -47392284 - AluSx SINE Alu -2 310 1 1730 128 0 119 chr17 42112983 42113336 -47391217 + AluY SINE Alu 1 311 0 4085 204 16 48 chr17 42113453 42113941 -47390612 - MER21B-int LTR ERV1 -1356 2835 2388 1932 179 0 0 chr17 42113941 42114237 -47390316 + AluJb SINE Alu 1 296 -16 4085 204 16 48 chr17 42114237 42114663 -47389890 - MER21B-int LTR ERV1 -1803 2388 1950 1303 252 10 13 chr17 42114663 42114973 -47389580 + MER74B LTR ERVL 238 546 -76 5045 215 23 9 chr17 42115039 42115080 -47389473 - MER21B-int LTR ERV1 -3205 986 947 2005 117 49 78 chr17 42115080 42115289 -47389264 - THE1C LTR MaLR 0 375 180 2459 83 0 0 chr17 42115289 42115590 -47388963 + AluY SINE Alu 1 301 -10 2005 117 49 78 chr17 42115590 42115766 -47388787 - THE1C LTR MaLR -195 180 1 10752 100 28 38 chr17 42115766 42117363 -47387190 - THE1C-int LTR MaLR 0 1580 1 2182 106 57 41 chr17 42117363 42117402 -47387151 - THE1C LTR MaLR 0 375 338 2536 85 0 0 chr17 42117402 42117709 -47386844 + AluY SINE Alu 1 307 -4 2182 106 57 41 chr17 42117709 42118038 -47386515 - THE1C LTR MaLR -37 338 1 5045 215 23 9 chr17 42118038 42118956 -47385597 - MER21B-int LTR ERV1 -3243 948 12 1665 204 87 78 chr17 42118961 42119558 -47384995 - MER21B LTR ERV1 -95 836 98 267 31 0 0 chr17 42119650 42119682 -47384871 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 397 208 10 73 chr17 42119683 42119779 -47384774 - MER21B LTR ERV1 -773 90 1 368 231 46 9 chr17 42119780 42119888 -47384665 - L1ME4a LINE L1 -44 6077 5966 328 266 246 24 chr17 42119992 42120240 -47384313 + L2 LINE L2 3009 3311 -2 1712 137 37 57 chr17 42120308 42120608 -47383945 + AluSx SINE Alu 1 294 -18 1744 135 36 29 chr17 42121412 42121693 -47382860 - AluSx SINE Alu -6 306 24 2089 127 27 12 chr17 42121772 42122019 -47382534 + MER44D DNA MER2_type 2 244 -2247 1691 166 52 38 chr17 42122019 42122362 -47382191 + MER7A DNA MER2_type 1 346 0 2089 127 27 12 chr17 42122362 42122446 -47382107 + MER44D DNA MER2_type 244 608 -1 974 206 0 0 chr17 42122681 42122851 -47381702 + FAM SINE Alu 1 170 -5 2159 109 26 10 chr17 42123270 42123574 -47380979 + AluSx SINE Alu 1 309 -3 1262 203 5 0 chr17 42123660 42123882 -47380671 - MER58A DNA MER1_type 0 224 2 1683 204 81 43 chr17 42125378 42125823 -47378730 - MLT1C LTR MaLR 0 467 6 1791 158 35 0 chr17 42126632 42126917 -47377636 - AluJb SINE Alu -17 295 1 180 111 0 0 chr17 42126949 42126976 -47377577 + (T)n Simple_repeat Simple_repeat 1 27 0 2188 102 0 22 chr17 42127115 42127459 -47377094 - AluY SINE Alu 0 311 1 651 184 147 42 chr17 42127697 42127887 -47376666 - MER63A DNA MER1_type 0 210 1 183 129 0 0 chr17 42128512 42128543 -47376010 + (TCCA)n Simple_repeat Simple_repeat 2 32 0 516 133 57 67 chr17 42128665 42128770 -47375783 + Charlie2 DNA MER1_type 45 148 -2634 866 130 5 32 chr17 42128802 42128987 -47375566 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 211 200 0 0 chr17 42128987 42129022 -47375531 + polypyrimidine Low_complexity Low_complexity 1 35 0 1880 180 10 0 chr17 42129022 42129328 -47375225 - AluJb SINE Alu -3 309 1 333 191 281 0 chr17 42129330 42129419 -47375134 + Charlie2 DNA MER1_type 198 311 -2471 1762 192 74 61 chr17 42129455 42130074 -47374479 + Charlie2 DNA MER1_type 2230 2856 -6 462 257 115 25 chr17 42181752 42181953 -47322600 - MLT1H1 LTR MaLR -322 233 1 310 214 0 26 chr17 42182310 42182388 -47322165 - MIR SINE MIR -47 161 83 369 355 68 8 chr17 42182477 42182728 -47321825 + L2 LINE L2 2565 2830 -484 282 269 106 19 chr17 42182742 42182846 -47321707 + MER20B DNA MER1_type 16 128 -655 2005 156 0 3 chr17 42183331 42183620 -47320933 + AluJb SINE Alu 1 288 -24 970 133 40 0 chr17 42183754 42183904 -47320649 - AluSg/x SINE Alu -7 305 150 603 267 6 19 chr17 42183924 42184085 -47320468 - AluJb SINE Alu -16 296 138 2116 145 10 0 chr17 42184089 42184393 -47320160 - AluSx SINE Alu -5 307 1 288 152 22 0 chr17 42184589 42184635 -47319918 + Alu SINE Alu 1 47 -254 1496 188 13 33 chr17 42184736 42185039 -47319514 + AluJo SINE Alu 12 308 -4 758 175 70 100 chr17 42185300 42185431 -47319122 + AluJo SINE Alu 4 128 -184 2117 123 0 32 chr17 42185431 42185568 -47318985 + AluSx SINE Alu 6 146 -166 2373 67 13 17 chr17 42185568 42185868 -47318685 + AluY SINE Alu 1 299 -12 2117 123 0 32 chr17 42185868 42186040 -47318513 + AluSx SINE Alu 146 305 -7 758 175 70 100 chr17 42186040 42186108 -47318445 + AluJo SINE Alu 128 197 -115 243 250 0 0 chr17 42186218 42186274 -47318279 - FRAM/FAM SINE Alu -80 86 31 299 318 30 45 chr17 42187141 42187273 -47317280 + MER5A DNA MER1_type 59 188 -1 2469 73 0 3 chr17 42187438 42187738 -47316815 - AluY SINE Alu -12 299 1 2118 100 14 0 chr17 42187854 42188134 -47316419 - AluSp SINE Alu -29 284 1 487 259 118 86 chr17 42188515 42188687 -47315866 - HAL1 LINE L1 -5 2502 2320 565 225 100 0 chr17 42188687 42188807 -47315746 - FLAM_A SINE Alu -1 132 1 487 259 118 86 chr17 42188807 42188854 -47315699 - HAL1 LINE L1 -187 2320 2276 860 107 91 0 chr17 42188854 42188975 -47315578 + AluSx SINE Alu 1 132 -180 1733 109 4 0 chr17 42188978 42189207 -47315346 + AluSp SINE Alu 1 230 -83 1401 103 0 20 chr17 42189309 42189504 -47315049 + AluSx SINE Alu 111 301 -9 1502 197 155 33 chr17 42189581 42189864 -47314689 + MER20B DNA MER1_type 275 522 -261 2257 129 0 3 chr17 42189864 42190173 -47314380 - AluSq SINE Alu -5 308 1 1502 197 155 33 chr17 42190173 42190310 -47314243 + MER20B DNA MER1_type 522 641 -142 1565 204 11 11 chr17 42190310 42190589 -47313964 + AluJo SINE Alu 1 279 -33 1502 197 155 33 chr17 42190589 42190619 -47313934 + MER20B DNA MER1_type 641 781 -2 756 99 20 0 chr17 42190646 42190747 -47313806 + AluSg SINE Alu 1 103 -207 972 252 21 99 chr17 42190858 42191068 -47313485 + HAL1 LINE L1 1319 1544 -963 2093 87 0 4 chr17 42191068 42191332 -47313221 + AluSg1 SINE Alu 36 298 -11 1534 137 126 11 chr17 42191334 42191597 -47312956 + AluSg1 SINE Alu 1 293 -16 972 252 21 99 chr17 42191597 42191670 -47312883 + HAL1 LINE L1 1545 1622 -885 1918 121 0 36 chr17 42191670 42191977 -47312576 + AluSx SINE Alu 1 296 -16 972 252 21 99 chr17 42191977 42192066 -47312487 + HAL1 LINE L1 1622 1659 -848 2558 66 3 3 chr17 42192066 42192370 -47312183 + AluSp SINE Alu 1 304 -9 972 252 21 99 chr17 42192370 42192425 -47312128 + HAL1 LINE L1 1659 1717 -790 278 194 77 106 chr17 42192421 42192591 -47311962 + HAL1 LINE L1 1935 2099 -408 * 2212 60 81 7 chr17 42192745 42193029 -47311524 + AluY SINE Alu 1 305 -6 948 84 0 0 chr17 42193141 42193260 -47311293 + AluSg/x SINE Alu 187 305 -7 356 310 14 35 chr17 42193261 42193406 -47311147 + MER5A DNA MER1_type 44 185 -4 1918 171 0 16 chr17 42193544 42193860 -47310693 - AluJb SINE Alu -1 311 1 1499 155 0 40 chr17 42193876 42194128 -47310425 - AluSx SINE Alu -5 307 66 699 224 99 0 chr17 42194153 42194305 -47310248 + MIR SINE MIR 57 223 -39 263 120 0 60 chr17 42194316 42194366 -47310187 - AluSx SINE Alu -229 73 27 1501 161 75 101 chr17 42194781 42195197 -47309356 + Tigger2 DNA MER2_type 2 2690 -28 2108 141 3 0 chr17 42195201 42195507 -47309046 - AluSx SINE Alu -5 307 1 2112 104 7 4 chr17 42195514 42195838 -47308715 - AluY SINE Alu 0 325 1 672 315 5 15 chr17 42195868 42196065 -47308488 + MIR SINE MIR 19 213 -49 1764 146 13 52 chr17 42196074 42196382 -47308171 - AluJo SINE Alu -15 297 2 29 60 0 0 chr17 42196542 42196592 -47307961 + AT_rich Low_complexity Low_complexity 1 50 0 2145 125 3 0 chr17 42196599 42196895 -47307658 + AluSg SINE Alu 1 297 -13 2223 111 0 19 chr17 42196897 42197213 -47307340 + AluSg SINE Alu 1 310 0 2241 71 0 55 chr17 42197423 42197733 -47306820 + AluSg SINE Alu 1 293 -17 282 133 0 0 chr17 42197839 42197884 -47306669 - AluSp SINE Alu -110 193 149 2660 176 64 107 chr17 42197893 42198488 -47306065 + L1MA9 LINE L1 5486 6105 -207 2207 109 7 0 chr17 42198488 42198781 -47305772 + AluSg SINE Alu 1 295 -15 2660 176 64 107 chr17 42198781 42198798 -47305755 + L1MA9 LINE L1 6105 6121 -191 1553 168 7 67 chr17 42198798 42198943 -47305610 + AluJo SINE Alu 1 122 -190 2331 109 6 0 chr17 42198943 42199254 -47305299 + AluSp SINE Alu 1 313 0 1553 168 7 67 chr17 42199254 42199393 -47305160 + AluJo SINE Alu 122 268 -44 2660 176 64 107 chr17 42199393 42199620 -47304933 + L1MA9 LINE L1 6121 6290 -22 22 0 0 0 chr17 42199766 42199788 -47304765 + GC_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr17 42200056 42200083 -47304470 + (CGG)n Simple_repeat Simple_repeat 3 29 0 2210 117 0 0 chr17 42201541 42201858 -47302695 + AluSx SINE Alu 1 317 0 230 189 19 19 chr17 42201858 42201911 -47302642 + MLT1G1 LTR MaLR 533 585 -10 613 302 151 0 chr17 42201930 42202281 -47302272 - L2 LINE L2 -1122 2192 1789 1844 160 0 40 chr17 42202397 42202722 -47301831 + AluSx SINE Alu 1 312 0 2104 105 41 3 chr17 42202726 42203020 -47301533 + AluY SINE Alu 1 305 -6 370 173 0 12 chr17 42203024 42203105 -47301448 + MLT1C LTR MaLR 186 265 -202 643 177 27 0 chr17 42203106 42203253 -47301300 - L1MB4 LINE L1 -13 6167 6017 1651 91 5 0 chr17 42203354 42203564 -47300989 - AluSg SINE Alu -99 211 1 640 208 58 0 chr17 42203565 42203685 -47300868 - FLAM_A SINE Alu -6 127 1 2513 57 0 0 chr17 42203685 42204024 -47300529 - AluY SINE Alu 0 311 1 539 225 141 121 chr17 42204125 42204340 -47300213 - HAL1 LINE L1 -1845 662 453 2298 110 0 7 chr17 42204340 42204650 -47299903 - AluSx SINE Alu -4 308 1 539 225 141 121 chr17 42204650 42204717 -47299836 - HAL1 LINE L1 -2054 453 389 2105 125 0 10 chr17 42204717 42205013 -47299540 - AluSx SINE Alu -14 298 6 539 225 141 121 chr17 42205013 42205232 -47299321 - HAL1 LINE L1 -2118 389 150 1497 148 18 11 chr17 42205333 42205617 -47298936 + L1MC3 LINE L1 7470 7755 -30 207 0 0 0 chr17 42205633 42205656 -47298897 + (TTG)n Simple_repeat Simple_repeat 2 24 0 277 343 0 35 chr17 42207432 42207635 -47296918 + G-rich Low_complexity Low_complexity 1 195 0 1010 206 11 38 chr17 42207886 42208126 -47296427 - L1M4 LINE L1 -957 5189 4955 2451 81 0 0 chr17 42208126 42208422 -47296131 - AluY SINE Alu -15 296 1 1010 206 11 38 chr17 42208422 42208443 -47296110 - L1M4 LINE L1 -1191 4955 4935 1122 130 0 0 chr17 42208480 42208659 -47295894 - AluSg/x SINE Alu 0 310 132 193 277 31 15 chr17 42208707 42208772 -47295781 - L2 LINE L2 -2484 830 765 216 358 106 23 chr17 42208826 42209044 -47295509 - L2 LINE L2 -2783 531 296 2480 74 0 10 chr17 42209638 42209948 -47294605 + AluY SINE Alu 1 307 -4 802 197 0 21 chr17 42209993 42210135 -47294418 + AluJo SINE Alu 3 141 -171 29 0 0 0 chr17 42210235 42210264 -47294289 + AT_rich Low_complexity Low_complexity 1 29 0 2226 111 7 0 chr17 42210266 42210564 -47293989 + AluSp SINE Alu 1 300 -13 490 185 8 77 chr17 42210564 42210610 -47293943 + L1ME3 LINE L1 5930 5978 -184 2554 67 0 6 chr17 42210610 42210922 -47293631 + AluY SINE Alu 1 310 -1 490 185 8 77 chr17 42210922 42211005 -47293548 + L1ME3 LINE L1 5978 6050 -112 766 70 6 187 chr17 42211005 42211176 -47293377 + AluSg/x SINE Alu 131 270 -40 198 0 0 0 chr17 42211177 42211199 -47293354 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 260 290 56 9 chr17 42211200 42211307 -47293246 + L1ME3 LINE L1 6039 6150 -12 2254 114 0 0 chr17 42211378 42211677 -47292876 + AluSx SINE Alu 1 299 -13 694 152 0 0 chr17 42211987 42212092 -47292461 + FRAM SINE Alu 51 155 -21 1907 150 7 10 chr17 42212094 42212394 -47292159 + AluSx SINE Alu 1 299 -13 2170 101 47 3 chr17 42212529 42212827 -47291726 + AluY SINE Alu 1 311 0 1390 187 99 90 chr17 42212926 42213381 -47291172 + LTR64 LTR ERVK 1 459 -99 407 167 17 0 chr17 42213381 42213441 -47291112 + AluS SINE Alu 2 62 -256 2451 74 7 7 chr17 42213543 42213841 -47290712 + AluSg SINE Alu 1 298 -12 618 224 22 72 chr17 42213841 42213926 -47290627 - L2 LINE L2 -912 2402 2314 2189 61 24 30 chr17 42213926 42214221 -47290332 + AluY SINE Alu 1 293 -18 618 224 22 72 chr17 42214221 42214358 -47290195 - L2 LINE L2 -1000 2314 2191 1607 149 18 39 chr17 42214358 42214640 -47289913 + AluJb SINE Alu 1 276 -36 2276 76 17 0 chr17 42214991 42215280 -47289273 + AluSx SINE Alu 1 294 -18 300 263 5 70 chr17 42215964 42216150 -47288403 + C-rich Low_complexity Low_complexity 2 175 0 289 209 47 12 chr17 42216440 42216572 -47287981 + (CGGGG)n Simple_repeat Simple_repeat 1 136 0 204 97 0 0 chr17 42216626 42216657 -47287896 + (CGG)n Simple_repeat Simple_repeat 2 32 0 706 78 0 39 chr17 42216897 42217000 -47287553 + AluSg/x SINE Alu 196 294 -16 1627 167 39 3 chr17 42217283 42217565 -47286988 + AluJo SINE Alu 9 300 -12 819 53 0 0 chr17 42218106 42218219 -47286334 + (CA)n Simple_repeat Simple_repeat 2 114 0 214 243 14 14 chr17 42218405 42218475 -47286078 + (CGG)n Simple_repeat Simple_repeat 1 70 0 25 65 0 0 chr17 42218581 42218627 -47285926 + GC_rich Low_complexity Low_complexity 1 46 0 372 264 215 0 chr17 42219173 42219317 -47285236 + MIR SINE MIR 78 252 -10 344 327 18 70 chr17 42219988 42220278 -47284275 - L2 LINE L2 -17 3255 2925 2030 141 0 34 chr17 42220278 42220395 -47284158 + AluSx SINE Alu 1 120 -192 2420 56 0 43 chr17 42220395 42220700 -47283853 + AluY SINE Alu 1 292 -19 2030 141 0 34 chr17 42220700 42220902 -47283651 + AluSx SINE Alu 120 309 -3 411 146 0 0 chr17 42221066 42221121 -47283432 + AluSg/x SINE Alu 214 268 -44 418 245 216 29 chr17 42221637 42221845 -47282708 - MIR SINE MIR -8 254 8 978 119 0 0 chr17 42222404 42222538 -47282015 + FLAM_C SINE Alu 10 143 0 2137 145 0 0 chr17 42222582 42222885 -47281668 - AluSx SINE Alu -3 309 7 1383 83 0 33 chr17 42223726 42223907 -47280646 - AluSg/x SINE Alu -18 292 118 715 135 18 0 chr17 42223907 42224018 -47280535 - AluSg/x SINE Alu -14 298 186 26 0 0 0 chr17 42224300 42224326 -47280227 + AT_rich Low_complexity Low_complexity 1 26 0 2097 117 32 16 chr17 42224331 42224639 -47279914 - AluSq SINE Alu 0 313 1 608 189 63 0 chr17 42224660 42224771 -47279782 - FLAM_C SINE Alu -15 118 1 605 98 0 0 chr17 42225623 42225705 -47278848 - AluSp/q SINE Alu -16 297 216 737 154 0 18 chr17 42225838 42225948 -47278605 + FLAM_A SINE Alu 9 116 -26 2267 110 3 3 chr17 42225959 42226260 -47278293 - AluSx SINE Alu -11 301 1 1502 112 25 0 chr17 42226419 42226646 -47277907 - AluSg/x SINE Alu 0 314 83 2299 71 44 10 chr17 42226877 42227174 -47277379 - AluSg SINE Alu -3 307 1 2374 62 6 52 chr17 42227511 42227835 -47276718 - AluY SINE Alu -2 309 1 1467 146 120 26 chr17 42228956 42229223 -47275330 - AluJb SINE Alu -20 292 1 26 30 0 0 chr17 42229478 42229511 -47275042 + AT_rich Low_complexity Low_complexity 1 33 0 2245 92 0 7 chr17 42229611 42229903 -47274650 - AluSc SINE Alu -19 290 1 720 180 0 0 chr17 42230052 42230163 -47274390 + AluJb SINE Alu 183 293 -19 27 29 0 0 chr17 42230176 42230210 -47274343 + AT_rich Low_complexity Low_complexity 1 34 0 914 142 0 0 chr17 42230229 42230356 -47274197 - AluSq/x SINE Alu -179 133 7 219 278 10 72 chr17 42230434 42230531 -47274022 + MER5A DNA MER1_type 93 183 -6 * 327 361 38 19 chr17 42230527 42230685 -47273868 - L2 LINE L2 -616 2698 2538 268 203 0 78 chr17 42230725 42230789 -47273764 - Tigger5 DNA MER2_type 0 2323 2265 250 211 19 0 chr17 42230805 42230857 -47273696 - Tigger5 DNA MER2_type -2131 192 140 2261 97 10 10 chr17 42230860 42231169 -47273384 - AluSg SINE Alu -1 309 1 782 142 24 24 chr17 42231190 42231317 -47273236 - FLAM_C SINE Alu -16 127 1 529 167 22 0 chr17 42231319 42231409 -47273144 - Tigger5 DNA MER2_type -2231 92 1 212 350 60 47 chr17 42231569 42231788 -47272765 - L2 LINE L2 -635 2679 2451 1615 179 7 30 chr17 42231788 42232090 -47272463 + AluJb SINE Alu 1 295 -17 212 350 60 47 chr17 42232090 42232256 -47272297 - L2 LINE L2 -863 2451 2289 2121 121 17 0 chr17 42232802 42233091 -47271462 - AluSx SINE Alu -18 294 1 1874 128 85 0 chr17 42233326 42233607 -47270946 - AluSx SINE Alu -7 305 1 518 244 63 0 chr17 42233716 42233843 -47270710 - FLAM_A SINE Alu -7 135 1 339 53 0 4 chr17 42234155 42234363 -47270190 + AluY SINE Alu 1 299 -1 1699 168 46 0 chr17 42234530 42234815 -47269738 + AluJo SINE Alu 1 298 -14 321 26 0 0 chr17 42234839 42234877 -47269676 + (TG)n Simple_repeat Simple_repeat 2 39 0 188 279 207 17 chr17 42234905 42235084 -47269469 - L2 LINE L2 -2156 1158 946 2434 76 3 3 chr17 42235163 42235467 -47269086 + AluY SINE Alu 1 304 -7 282 180 0 33 chr17 42235469 42235530 -47269023 - L1MB8 LINE L1 -10 6168 6110 1239 155 13 71 chr17 42235541 42235634 -47268919 + AluJo SINE Alu 21 118 -194 1825 188 3 3 chr17 42235634 42235943 -47268610 - AluSx SINE Alu -3 309 1 1239 155 13 71 chr17 42235943 42236088 -47268465 + AluJo SINE Alu 118 245 -67 2293 87 10 3 chr17 42237114 42237412 -47267141 - AluSg SINE Alu -10 300 1 876 86 0 135 chr17 42237412 42237566 -47266987 - AluSg1 SINE Alu -174 135 2 242 200 316 0 chr17 42238650 42238745 -47265808 + MIR SINE MIR 20 144 -64 2223 106 0 3 chr17 42239845 42240148 -47264405 + AluSx SINE Alu 1 302 -10 435 232 11 0 chr17 42240151 42240246 -47264307 + MIR SINE MIR 47 142 -66 2274 101 0 0 chr17 42240359 42240667 -47263886 - AluSx SINE Alu -4 308 1 1979 115 14 0 chr17 42241297 42241599 -47262954 - AluSx SINE Alu 0 306 1 949 200 60 0 chr17 42241704 42241904 -47262649 + MER63B DNA MER1_type 1 212 -224 1895 132 0 67 chr17 42241921 42242072 -47262481 + AluSx SINE Alu 1 161 -151 1959 109 0 0 chr17 42242072 42242337 -47262216 + AluSg SINE Alu 46 310 0 1895 132 0 67 chr17 42242337 42242503 -47262050 + AluSx SINE Alu 161 337 25 2172 91 3 39 chr17 42242503 42242810 -47261743 + AluSx SINE Alu 1 296 -16 2866 9 0 0 chr17 42242810 42243128 -47261425 + AluYb8 SINE Alu 1 318 0 2161 106 13 19 chr17 42243541 42243853 -47260700 - AluSg SINE Alu 0 310 1 1954 109 4 7 chr17 42245207 42245483 -47259070 - AluSq SINE Alu -37 276 2 21 0 0 0 chr17 42245801 42245822 -47258731 + AT_rich Low_complexity Low_complexity 1 21 0 2334 112 0 0 chr17 42246338 42246650 -47257903 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 42247416 42247437 -47257116 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 42247997 42248020 -47256533 + GC_rich Low_complexity Low_complexity 1 23 0 466 188 8 8 chr17 42249452 42249569 -47254984 + CT-rich Low_complexity Low_complexity 2 118 0 1810 82 114 0 chr17 42250667 42250947 -47253606 + AluSq SINE Alu 1 312 -1 2351 61 7 3 chr17 42251663 42251960 -47252593 + AluSc SINE Alu 1 298 -11 1412 116 123 126 chr17 42252191 42252493 -47252060 + AluJo SINE Alu 1 301 -1 2177 82 13 7 chr17 42254137 42254441 -47250112 + AluY SINE Alu 2 307 -4 279 0 0 0 chr17 42254519 42254550 -47250003 + (TG)n Simple_repeat Simple_repeat 2 32 0 753 111 0 0 chr17 42254585 42254684 -47249869 - AluSq/x SINE Alu -177 135 37 456 156 43 106 chr17 42254717 42254751 -47249802 - MER20B DNA MER1_type 0 783 748 1449 201 24 24 chr17 42254751 42255049 -47249504 - AluJo SINE Alu -14 298 1 456 156 43 106 chr17 42255049 42255155 -47249398 - MER20B DNA MER1_type -35 748 652 1451 178 123 0 chr17 42255371 42255647 -47248906 - AluJb SINE Alu -2 310 1 2100 103 0 17 chr17 42255742 42256044 -47248509 - AluSx SINE Alu -15 297 1 560 204 42 110 chr17 42256651 42256773 -47247780 - MER5B DNA MER1_type 0 178 49 2146 117 13 0 chr17 42256773 42257082 -47247471 - AluSq SINE Alu 0 313 1 1912 127 31 10 chr17 42257086 42257378 -47247175 - AluSx SINE Alu -14 298 1 560 204 42 110 chr17 42257378 42257441 -47247112 - MER5B DNA MER1_type -132 46 1 2086 87 0 7 chr17 42259636 42259913 -47244640 + AluSx SINE Alu 24 298 -14 757 198 60 44 chr17 42259959 42260141 -47244412 + MER5A DNA MER1_type 5 189 0 2048 113 17 3 chr17 42260208 42260509 -47244044 + AluSx SINE Alu 1 305 -7 273 75 0 0 chr17 42263344 42263384 -47241169 + (CA)n Simple_repeat Simple_repeat 2 41 0 389 336 12 12 chr17 42263976 42264136 -47240417 - MIR3 SINE MIR -7 201 41 308 213 8 57 chr17 42264328 42264450 -47240103 + (CGGGG)n Simple_repeat Simple_repeat 3 118 0 21 0 0 0 chr17 42264575 42264596 -47239957 + GC_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr17 42264624 42264654 -47239899 + GC_rich Low_complexity Low_complexity 1 30 0 27 73 0 0 chr17 42265032 42265087 -47239466 + GC_rich Low_complexity Low_complexity 1 55 0 230 270 144 9 chr17 42266314 42266425 -47238128 + L2 LINE L2 3145 3270 -2 261 297 0 0 chr17 42267067 42267202 -47237351 + CT-rich Low_complexity Low_complexity 1 135 0 2234 108 0 0 chr17 42268015 42268320 -47236233 + AluSx SINE Alu 1 305 -7 627 232 100 26 chr17 42268368 42268558 -47235995 + MIR SINE MIR 11 214 -48 1787 155 3 50 chr17 42269455 42269778 -47234775 + AluJb SINE Alu 1 308 -4 180 309 148 12 chr17 42269856 42269937 -47234616 + MIR3 SINE MIR 6 97 -111 626 164 8 0 chr17 42270792 42270914 -47233639 + CT-rich Low_complexity Low_complexity 3 125 0 256 232 20 0 chr17 42270932 42271031 -47233522 + CT-rich Low_complexity Low_complexity 2 102 0 374 267 38 9 chr17 42272744 42272849 -47231704 + MIR SINE MIR 34 141 -121 233 265 169 0 chr17 42275534 42275617 -47228936 + MIR SINE MIR 51 147 -61 1966 96 11 11 chr17 42277163 42277444 -47227109 - AluSx SINE Alu -13 299 19 259 204 171 68 chr17 42277498 42277586 -47226967 + MIR SINE MIR 57 153 -109 1831 129 3 35 chr17 42277688 42277833 -47226720 - AluSg SINE Alu -33 277 144 2285 68 3 3 chr17 42277833 42278127 -47226426 - AluY SINE Alu -17 294 1 1831 129 3 35 chr17 42278127 42278267 -47226286 - AluSg SINE Alu -166 144 1 1120 69 7 0 chr17 42278268 42278412 -47226141 - AluSp SINE Alu -167 146 2 241 337 21 11 chr17 42279347 42279442 -47225111 + MIR SINE MIR 58 153 -109 236 339 91 43 chr17 42279773 42279959 -47224594 + L2 LINE L2 3017 3211 -61 249 254 32 0 chr17 42280019 42280082 -47224471 - L2 LINE L2 0 3313 3249 1713 147 0 97 chr17 42280115 42280240 -47224313 + AluJb SINE Alu 1 137 -165 2181 89 7 3 chr17 42280240 42280531 -47224022 - AluSx SINE Alu -16 296 5 1713 147 0 97 chr17 42280531 42280546 -47224007 + AluJb SINE Alu 137 152 -150 2208 88 7 0 chr17 42280546 42280842 -47223711 - AluSp SINE Alu -15 298 1 1713 147 0 97 chr17 42280842 42281019 -47223534 + AluJb SINE Alu 152 288 -14 593 342 31 5 chr17 42281174 42281370 -47223183 + MIR SINE MIR 36 236 -26 708 161 3 17 chr17 42281950 42282309 -47222244 + (CA)n Simple_repeat Simple_repeat 1 353 0 620 148 0 24 chr17 42282320 42282489 -47222064 + (CA)n Simple_repeat Simple_repeat 1 165 0 437 279 12 99 chr17 42282630 42282740 -47221813 + MIR SINE MIR 67 158 -104 2134 97 7 13 chr17 42282740 42283040 -47221513 - AluSx SINE Alu -14 298 1 437 279 12 99 chr17 42283040 42283101 -47221452 + MIR SINE MIR 158 223 -39 262 296 3 50 chr17 42283907 42284181 -47220372 + C-rich Low_complexity Low_complexity 1 261 0 1832 54 0 0 chr17 42287256 42287478 -47217075 + AluY SINE Alu 90 311 0 2066 106 3 3 chr17 42287495 42287788 -47216765 + AluSg SINE Alu 1 293 -17 2357 97 3 0 chr17 42287790 42288090 -47216463 + AluSp SINE Alu 1 301 -12 2369 59 0 21 chr17 42288091 42288378 -47216175 + AluY SINE Alu 2 313 0 247 32 0 0 chr17 42288378 42288409 -47216144 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2228 124 7 0 chr17 42288410 42288708 -47215845 + AluSx SINE Alu 1 300 -12 698 199 85 0 chr17 42288723 42288904 -47215649 + MIR SINE MIR 57 251 -11 1197 174 29 92 chr17 42288982 42289113 -47215440 + AluJo SINE Alu 3 141 -161 2583 77 0 0 chr17 42289113 42289424 -47215129 + AluY SINE Alu 1 311 0 1197 174 29 92 chr17 42289424 42289522 -47215031 + AluJo SINE Alu 141 244 -58 2127 136 0 16 chr17 42289522 42289659 -47214894 + AluSx SINE Alu 1 139 -173 2225 85 41 3 chr17 42289659 42289952 -47214601 + AluSq SINE Alu 1 304 -9 2127 136 0 16 chr17 42289952 42290122 -47214431 + AluSx SINE Alu 139 303 -9 2275 100 0 32 chr17 42290129 42290439 -47214114 + AluY SINE Alu 1 300 -11 1197 174 29 92 chr17 42290439 42290516 -47214037 + AluJo SINE Alu 250 298 -4 218 239 42 14 chr17 42290565 42290636 -47213917 + L2 LINE L2 2952 3024 -248 1697 186 7 20 chr17 42290662 42290827 -47213726 - AluJb SINE Alu -13 299 138 2381 88 3 0 chr17 42290827 42291124 -47213429 - AluSp SINE Alu -13 300 3 1697 186 7 20 chr17 42291124 42291259 -47213294 - AluJb SINE Alu -174 138 3 233 299 219 25 chr17 42291380 42291581 -47212972 - L2 LINE L2 -246 3067 2828 302 336 117 42 chr17 42291687 42291970 -47212583 + L2 LINE L2 2946 3249 -23 361 293 127 44 chr17 42292050 42292231 -47212322 - MIR SINE MIR -44 218 23 783 154 86 12 chr17 42292673 42292835 -47211718 + MER5B DNA MER1_type 1 174 -4 345 47 0 0 chr17 42293055 42293098 -47211455 + (CGG)n Simple_repeat Simple_repeat 2 44 0 908 128 0 0 chr17 42293836 42293969 -47210584 - FLAM_C SINE Alu 0 133 1 1638 177 3 47 chr17 42294080 42294266 -47210287 - AluJb SINE Alu -4 308 140 510 17 0 0 chr17 42294266 42294325 -47210228 + (TA)n Simple_repeat Simple_repeat 2 60 0 1638 177 3 47 chr17 42294325 42294460 -47210093 - AluJb SINE Alu -172 140 1 2246 79 0 26 chr17 42294469 42294774 -47209779 - AluY SINE Alu -14 297 1 2138 129 0 11 chr17 42295145 42295455 -47209098 + AluSx SINE Alu 1 307 0 365 320 16 8 chr17 42298603 42298731 -47205822 - MIR3 SINE MIR -8 200 72 2231 111 7 3 chr17 42298772 42299069 -47205484 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr17 42302256 42302280 -47202273 + (TG)n Simple_repeat Simple_repeat 1 24 0 1788 142 16 62 chr17 42303426 42303735 -47200818 + AluSx SINE Alu 1 295 -17 2201 118 0 7 chr17 42303736 42304033 -47200520 + AluSx SINE Alu 1 295 -17 910 207 6 0 chr17 42304147 42304305 -47200248 + AluSg/x SINE Alu 136 295 -10 2282 116 0 0 chr17 42304305 42304623 -47199930 + AluYb8 SINE Alu 1 318 0 2321 102 7 0 chr17 42304634 42304929 -47199624 + AluSc SINE Alu 1 297 -12 24 32 0 0 chr17 42304976 42305007 -47199546 + AT_rich Low_complexity Low_complexity 1 31 0 561 162 144 9 chr17 42305014 42305125 -47199428 - FLAM_C SINE Alu -16 127 2 379 216 60 37 chr17 42305146 42305280 -47199273 + MER63 DNA MER1_type 925 1061 0 2516 63 0 10 chr17 42305632 42305931 -47198622 - AluY SINE Alu -15 296 1 2482 80 7 0 chr17 42305931 42306233 -47198320 - AluSx SINE Alu -8 304 1 224 281 16 0 chr17 42306248 42306312 -47198241 + L2 LINE L2 2995 3059 -213 437 322 54 41 chr17 42306456 42306698 -47197855 - L2 LINE L2 -8 3264 3020 409 205 123 76 chr17 42307493 42307560 -47196993 + MER5A DNA MER1_type 9 71 -118 910 203 18 0 chr17 42307560 42307723 -47196830 + FAM SINE Alu 1 166 -9 409 205 123 76 chr17 42307723 42307826 -47196727 + MER5A DNA MER1_type 71 187 -2 1241 93 12 0 chr17 42307826 42307988 -47196565 + AluSq SINE Alu 135 298 -15 227 220 193 28 chr17 42309043 42309152 -47195401 + MIR SINE MIR 136 262 0 26 50 0 0 chr17 42309536 42309576 -47194977 + GC_rich Low_complexity Low_complexity 1 40 0 266 300 70 0 chr17 42309758 42309858 -47194695 - MER91A DNA MER1_type 0 196 90 224 253 100 80 chr17 42309862 42310012 -47194541 - MER91A DNA MER1_type -25 171 19 522 0 0 0 chr17 42312301 42312359 -47192194 + (TG)n Simple_repeat Simple_repeat 2 59 0 1996 111 46 0 chr17 42313843 42314123 -47190430 + AluSx SINE Alu 1 293 -19 2264 81 0 18 chr17 42314387 42314697 -47189856 - AluY SINE Alu 0 305 1 696 296 26 75 chr17 42314759 42314879 -47189674 + L2 LINE L2 2319 2443 -871 2093 114 7 0 chr17 42314879 42315150 -47189403 - AluSx SINE Alu -39 273 1 696 296 26 75 chr17 42315150 42315445 -47189108 + L2 LINE L2 2443 2714 -600 477 135 4 3 chr17 42315446 42315669 -47188884 + AluJo SINE Alu 2 302 -10 396 155 0 0 chr17 42315677 42315748 -47188805 + GA-rich Low_complexity Low_complexity 4 74 0 649 242 38 0 chr17 42315750 42315907 -47188646 + L1ME3 LINE L1 5732 5894 -268 1947 155 3 22 chr17 42315907 42315965 -47188588 + AluJo SINE Alu 1 59 -253 5137 74 36 78 chr17 42315965 42316827 -47187726 + LTR12 LTR ERV1 1 826 0 1947 155 3 22 chr17 42316827 42316909 -47187644 + AluJo SINE Alu 59 141 -171 1790 175 3 10 chr17 42316909 42317045 -47187508 + AluJb SINE Alu 1 136 -176 2343 79 17 0 chr17 42317045 42317337 -47187216 + AluSp SINE Alu 1 297 -16 2228 103 0 10 chr17 42317337 42317638 -47186915 + AluSg1 SINE Alu 1 298 -11 1790 175 3 10 chr17 42317638 42317803 -47186750 + AluJb SINE Alu 134 301 -11 1947 155 3 22 chr17 42317803 42317977 -47186576 + AluJo SINE Alu 141 310 -2 2164 101 0 24 chr17 42317977 42318274 -47186279 + AluSc SINE Alu 1 290 -19 2507 51 0 0 chr17 42318274 42318570 -47185983 + AluY SINE Alu 1 296 -15 1619 109 5 0 chr17 42318574 42318784 -47185769 + AluSp SINE Alu 1 211 -102 235 26 0 0 chr17 42319064 42319102 -47185451 - Alu SINE Alu 0 300 263 461 341 0 0 chr17 42319191 42319326 -47185227 - L2 LINE L2 -316 2997 2863 2246 93 3 27 chr17 42320222 42320522 -47184031 + AluSx SINE Alu 1 293 -19 650 85 0 11 chr17 42320726 42320820 -47183733 - HY4 scRNA scRNA 0 93 1 1077 93 0 14 chr17 42321341 42321480 -47183073 + AluSq/x SINE Alu 1 137 -175 511 95 0 14 chr17 42321487 42321561 -47182992 + tRNA-Arg-CGA tRNA tRNA 1 73 -3 2315 83 0 0 chr17 42321569 42321846 -47182707 + AluSx SINE Alu 1 277 -35 180 0 0 0 chr17 42321851 42321871 -47182682 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1224 209 0 97 chr17 42321876 42322196 -47182357 + AluJo SINE Alu 2 290 -12 2253 74 32 0 chr17 42322338 42322621 -47181932 + AluY SINE Alu 1 292 -19 1032 146 0 30 chr17 42322621 42322786 -47181767 + AluSq SINE Alu 134 293 -20 750 244 104 0 chr17 42323121 42323342 -47181211 + MIR SINE MIR 17 260 -2 939 160 17 6 chr17 42323479 42323654 -47180899 + MER5A DNA MER1_type 13 189 0 1602 177 35 7 chr17 42323684 42323967 -47180586 - AluJb SINE Alu -21 291 1 2277 80 23 17 chr17 42324343 42324642 -47179911 - AluSx SINE Alu -9 303 3 257 321 37 9 chr17 42324845 42324954 -47179599 + MIR3 SINE MIR 96 207 -1 1003 84 7 0 chr17 42326639 42326782 -47177771 - L1PA16 LINE L1 -9 6157 6014 203 111 0 44 chr17 42326924 42326969 -47177584 + (GGGAGA)n Simple_repeat Simple_repeat 6 48 0 1761 136 21 0 chr17 42327403 42327645 -47176908 - AluSx SINE Alu -65 247 1 473 345 0 7 chr17 42327675 42327817 -47176736 - MER115 DNA AcHobo -413 280 140 2433 88 7 0 chr17 42328807 42329112 -47175441 + AluSp SINE Alu 1 307 -6 2321 98 7 0 chr17 42330280 42330585 -47173968 + AluY SINE Alu 1 307 -4 744 181 14 100 chr17 42330819 42331029 -47173524 - AluJo SINE Alu -119 193 2 234 128 0 0 chr17 42331501 42331540 -47173013 + (GGGA)n Simple_repeat Simple_repeat 1 39 0 2139 148 0 0 chr17 42332029 42332339 -47172214 + AluSx SINE Alu 1 310 -2 1146 159 0 0 chr17 42332339 42332509 -47172044 + AluSg/x SINE Alu 134 303 -9 210 71 0 0 chr17 42332566 42332594 -47171959 + (A)n Simple_repeat Simple_repeat 1 28 0 2312 95 7 3 chr17 42332796 42333102 -47171451 + AluSg1 SINE Alu 1 307 -2 1619 189 7 14 chr17 42334161 42334458 -47170095 - AluJo SINE Alu -12 300 6 344 272 117 33 chr17 42334492 42334705 -47169848 + L2 LINE L2 2831 3061 -252 1919 129 18 14 chr17 42334797 42335106 -47169447 + AluSx SINE Alu 1 310 0 2273 87 21 0 chr17 42335112 42335401 -47169152 + AluSp SINE Alu 1 295 -18 941 173 27 0 chr17 42335401 42335551 -47169002 + AluJb SINE Alu 83 236 -76 1485 199 78 0 chr17 42335611 42335893 -47168660 + AluJo SINE Alu 1 304 -8 385 141 11 98 chr17 42335893 42335985 -47168568 + L2 LINE L2 3230 3313 0 544 225 39 0 chr17 42336010 42336139 -47168414 + L1MC/D LINE L1 5621 5754 -2054 2842 23 0 0 chr17 42336203 42336513 -47168040 + AluYa5 SINE Alu 1 310 -1 677 249 169 52 chr17 42337267 42337592 -47166961 + L2 LINE L2 2902 3264 -8 267 309 125 0 chr17 42338005 42338130 -47166423 + MIR SINE MIR 23 147 -61 2275 109 7 0 chr17 42338346 42338639 -47165914 + AluSq SINE Alu 3 297 -16 186 191 0 0 chr17 42340880 42340927 -47163626 + GA-rich Low_complexity Low_complexity 3 49 0 322 314 71 11 chr17 42342297 42342455 -47162098 + MIR SINE MIR 8 149 -59 265 281 61 35 chr17 42345203 42345317 -47159236 - MIR3 SINE MIR -8 200 84 2142 107 7 0 chr17 42345409 42345708 -47158845 + AluSx SINE Alu 2 302 -10 2256 98 0 0 chr17 42346010 42346306 -47158247 + AluSx SINE Alu 3 298 -14 2294 84 0 16 chr17 42346317 42346627 -47157926 + AluSp SINE Alu 9 313 0 1947 118 38 10 chr17 42347787 42348075 -47156478 - AluSx SINE Alu -16 296 1 227 231 0 10 chr17 42348427 42348531 -47156022 + (TG)n Simple_repeat Simple_repeat 2 104 0 315 0 0 0 chr17 42348629 42348664 -47155889 + (ACTG)n Simple_repeat Simple_repeat 4 38 0 698 239 38 0 chr17 42349114 42349273 -47155280 - MIR SINE MIR -10 252 88 1353 186 28 4 chr17 42400484 42400737 -47103816 - AluSx SINE Alu -23 289 31 8228 127 106 57 chr17 42400740 42402350 -47102203 - pTR5 LTR ERV1 0 2438 750 263 98 122 0 chr17 42402350 42402391 -47102162 - AluSx SINE Alu -257 46 1 834 107 25 0 chr17 42402564 42402686 -47101867 + BC200 scRNA scRNA 5 129 -71 2805 168 17 8 chr17 42402730 42403212 -47101341 + MER66B LTR ERV1 1 486 0 222 189 0 0 chr17 42403298 42403335 -47101218 + polypurine Low_complexity Low_complexity 3 39 0 2207 115 3 0 chr17 42403499 42403795 -47100758 - AluSx SINE Alu -15 297 1 400 103 294 0 chr17 42403852 42403920 -47100633 - 5S rRNA rRNA -32 89 2 1778 184 48 143 chr17 42403920 42404158 -47100395 - L1ME2 LINE L1 -71 6093 5834 689 48 0 0 chr17 42404158 42404242 -47100311 + AluY SINE Alu 2 85 -226 1778 184 48 143 chr17 42404242 42404529 -47100024 - L1ME2 LINE L1 -330 5834 5543 3451 47 40 5 chr17 42404584 42405013 -47099540 - MLT2A1 LTR ERVL 0 444 1 1642 162 47 87 chr17 42405094 42405563 -47098990 + LTR7 LTR ERV1 1 450 0 482 204 15 45 chr17 42406467 42406599 -47097954 + MLT1J2 LTR MaLR 36 163 -287 231 125 0 0 chr17 42406606 42406646 -47097907 + (GA)n Simple_repeat Simple_repeat 1 40 0 2261 84 40 0 chr17 42406709 42407006 -47097547 - AluSx SINE Alu -3 309 1 2131 98 24 3 chr17 42407007 42407294 -47097259 - AluSx SINE Alu -19 293 1 381 158 105 0 chr17 42407304 42407380 -47097173 + MLT1J LTR MaLR 416 499 -12 2510 57 0 10 chr17 42407380 42407680 -47096873 - AluY SINE Alu -14 297 1 398 323 62 52 chr17 42408210 42408379 -47096174 - L2 LINE L2 0 3313 3147 2121 104 11 0 chr17 42408379 42408658 -47095895 + AluSx SINE Alu 1 282 -30 459 0 0 0 chr17 42408664 42408715 -47095838 + (TG)n Simple_repeat Simple_repeat 2 52 0 398 323 62 52 chr17 42408715 42408826 -47095727 - L2 LINE L2 -170 3143 3023 23 33 0 0 chr17 42408905 42408935 -47095618 + AT_rich Low_complexity Low_complexity 1 30 0 506 195 0 0 chr17 42408938 42409025 -47095528 + AluJ/FLAM SINE Alu 2 88 -224 2036 123 0 40 chr17 42409134 42409459 -47095094 - AluSx SINE Alu 0 312 1 842 189 0 20 chr17 42409641 42409794 -47094759 + AluJb SINE Alu 141 290 -22 2184 103 14 0 chr17 42410118 42410408 -47094145 - AluSg SINE Alu -16 294 1 927 184 75 5 chr17 42410503 42410704 -47093849 - L1MC4a LINE L1 -374 7434 7220 2412 100 0 0 chr17 42410901 42411210 -47093343 - AluSg SINE Alu 0 310 2 1009 113 0 0 chr17 42411220 42411353 -47093200 - AluSq/x SINE Alu -180 133 1 2277 102 0 3 chr17 42411358 42411662 -47092891 - AluSg SINE Alu -7 303 1 2278 100 6 13 chr17 42411704 42412015 -47092538 - AluY SINE Alu -2 309 1 2217 107 7 0 chr17 42412608 42412899 -47091654 + AluSx SINE Alu 1 293 -19 973 176 0 0 chr17 42413235 42413383 -47091170 - AluJb SINE Alu -25 287 140 2115 138 0 7 chr17 42413390 42413686 -47090867 - AluSx SINE Alu -16 296 3 697 160 127 83 chr17 42413820 42413924 -47090629 - MER5A DNA MER1_type 0 189 72 2157 123 13 3 chr17 42413924 42414232 -47090321 - AluSq SINE Alu -2 311 1 697 160 127 83 chr17 42414232 42414308 -47090245 - MER5A DNA MER1_type -117 72 1 408 198 52 10 chr17 42414328 42414424 -47090129 + MER5A DNA MER1_type 10 109 -80 2352 97 0 0 chr17 42414555 42414854 -47089699 + AluSg SINE Alu 1 299 -11 391 210 198 32 chr17 42414882 42415039 -47089514 - L1MD2 LINE L1 -55 6304 6122 850 194 52 0 chr17 42415068 42415223 -47089330 - AluSg/x SINE Alu -13 299 137 311 288 137 7 chr17 42415301 42415447 -47089106 - L1M4 LINE L1 -1067 5079 4915 2349 90 0 3 chr17 42417444 42417734 -47086819 - AluSx SINE Alu -23 289 1 2243 107 10 7 chr17 42417869 42418169 -47086384 - AluSx SINE Alu -11 301 1 935 165 12 18 chr17 42418310 42418480 -47086073 - AluJo SINE Alu -24 288 120 666 78 68 10 chr17 42418480 42418583 -47085970 - HY1 scRNA scRNA -3 109 1 213 245 151 0 chr17 42419053 42419106 -47085447 + L2 LINE L2 3172 3232 -40 1287 131 135 80 chr17 42420169 42420284 -47084269 + AluJo SINE Alu 1 108 -204 2022 142 3 19 chr17 42420284 42420595 -47083958 + AluJb SINE Alu 1 306 -6 1287 131 135 80 chr17 42420595 42420753 -47083800 + AluJo SINE Alu 108 289 -23 1226 195 22 8 chr17 42420763 42421030 -47083523 + L1MB8 LINE L1 4783 5053 -1093 1938 106 0 36 chr17 42421057 42421331 -47083222 + AluSx SINE Alu 40 303 -9 552 201 93 23 chr17 42421331 42421546 -47083007 + L1MB8 LINE L1 5823 6064 -120 521 146 0 0 chr17 42421579 42421661 -47082892 - AluSg/x SINE Alu -15 294 213 182 275 0 0 chr17 42422067 42422107 -47082446 + MIR SINE MIR 36 75 -133 1529 166 64 30 chr17 42422305 42422601 -47081952 - AluJo SINE Alu -6 306 1 2349 113 0 0 chr17 42422694 42422996 -47081557 - AluSx SINE Alu -6 306 5 2390 94 3 0 chr17 42423193 42423492 -47081061 - AluSp SINE Alu -13 300 1 2120 119 34 0 chr17 42423525 42423818 -47080735 - AluSx SINE Alu -9 303 1 604 136 212 38 chr17 42424767 42424899 -47079654 - AluJb SINE Alu -20 292 138 1449 245 266 21 chr17 42426621 42426851 -47077702 - L2 LINE L2 -4 3309 3137 2221 120 3 0 chr17 42426851 42427160 -47077393 + AluSq SINE Alu 2 311 -2 1449 245 266 21 chr17 42427160 42428025 -47076528 - L2 LINE L2 -176 3137 1923 498 159 168 9 chr17 42428122 42428229 -47076324 - MER20 DNA MER1_type 0 219 96 236 227 0 0 chr17 42428876 42428920 -47075633 + L2 LINE L2 3265 3308 -5 239 318 84 19 chr17 42429170 42429324 -47075229 - L1MC/D LINE L1 -1909 5899 5736 2008 123 3 23 chr17 42430407 42430579 -47073974 - AluSq SINE Alu -9 304 130 2105 109 37 3 chr17 42430579 42430873 -47073680 - AluSp SINE Alu -9 304 1 2304 82 0 47 chr17 42430873 42431192 -47073361 - AluY SINE Alu -7 304 1 2225 108 0 0 chr17 42431192 42431489 -47073064 - AluY SINE Alu -14 297 1 2008 123 3 23 chr17 42431489 42431624 -47072929 - AluSq SINE Alu -180 133 1 2283 104 0 19 chr17 42432405 42432721 -47071832 + AluSq SINE Alu 1 310 -3 21 36 0 0 chr17 42433549 42433577 -47070976 + AT_rich Low_complexity Low_complexity 1 28 0 260 277 12 24 chr17 42434249 42434332 -47070221 - L2 LINE L2 -1 3271 3190 2439 91 3 0 chr17 42434336 42434643 -47069910 + AluSq SINE Alu 1 308 -5 926 148 16 33 chr17 42434646 42434828 -47069725 + AluSq SINE Alu 135 313 0 1982 128 0 65 chr17 42434899 42435220 -47069333 + AluSx SINE Alu 1 300 -12 2178 125 0 26 chr17 42435220 42435531 -47069022 + AluSx SINE Alu 1 303 -9 1540 149 22 22 chr17 42437375 42437644 -47066909 + AluJb SINE Alu 44 312 0 2109 104 4 4 chr17 42437786 42438093 -47066460 + AluSg SINE Alu 1 307 0 352 250 0 75 chr17 42438792 42438912 -47065641 - L1M4 LINE L1 -350 5771 5662 2311 118 0 0 chr17 42439102 42439407 -47065146 + AluSx SINE Alu 1 305 -7 1162 139 0 0 chr17 42439407 42439557 -47064996 + AluSg/x SINE Alu 135 307 -3 23 0 0 0 chr17 42439557 42439580 -47064973 + AT_rich Low_complexity Low_complexity 1 23 0 2458 90 0 0 chr17 42439810 42440121 -47064432 + AluY SINE Alu 1 311 0 2144 137 0 0 chr17 42440138 42440446 -47064107 + AluJb SINE Alu 1 306 -6 1674 118 26 138 chr17 42440531 42440660 -47063893 + AluSx SINE Alu 1 143 -159 1741 156 7 17 chr17 42440660 42440961 -47063592 + AluSx SINE Alu 1 298 -14 1674 118 26 138 chr17 42440961 42441171 -47063382 + AluSx SINE Alu 143 302 0 2392 71 0 0 chr17 42441603 42441899 -47062654 - AluY SINE Alu -15 296 1 411 358 34 6 chr17 42442159 42442225 -47062328 + L1MC4 LINE L1 7836 7899 -143 469 173 146 18 chr17 42442225 42442335 -47062218 + FLAM_C SINE Alu 1 124 -9 411 358 34 6 chr17 42442335 42442444 -47062109 + L1MC4 LINE L1 7899 8016 -26 209 132 26 0 chr17 42442871 42442909 -47061644 + T-rich Low_complexity Low_complexity 4 42 0 1486 159 21 31 chr17 42445027 42445355 -47059198 + AluJo SINE Alu 1 325 0 2222 109 0 6 chr17 42445672 42445983 -47058570 - AluSx SINE Alu -2 310 2 323 309 143 0 chr17 42446140 42446308 -47058245 + MIR SINE MIR 44 235 -27 2125 107 3 19 chr17 42447044 42447361 -47057192 + AluSx SINE Alu 1 312 0 2719 22 3 0 chr17 42447701 42448016 -47056537 + AluYb8 SINE Alu 1 316 -2 220 384 0 0 chr17 42448207 42448280 -47056273 + MIR SINE MIR 42 114 -148 1550 155 155 20 chr17 42448281 42448687 -47055866 - LTR54B LTR ERV1 -24 474 14 1840 128 35 0 chr17 42448687 42448969 -47055584 - AluSx SINE Alu -20 292 1 2273 74 7 3 chr17 42448981 42449278 -47055275 - AluSg SINE Alu -12 298 1 191 271 0 0 chr17 42449393 42449441 -47055112 + MIR SINE MIR 205 252 -10 233 53 53 0 chr17 42449950 42449988 -47054565 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 367 299 78 65 chr17 42450171 42450317 -47054236 + L1MC4 LINE L1 5584 5727 -404 2301 99 0 3 chr17 42450317 42450630 -47053923 - AluSx SINE Alu 0 312 1 367 299 78 65 chr17 42450630 42450971 -47053582 + L1MC4 LINE L1 5727 5974 -157 1828 137 13 29 chr17 42450998 42451305 -47053248 - AluJo SINE Alu -10 302 1 314 298 12 0 chr17 42451556 42451640 -47052913 + MIR SINE MIR 62 146 -62 2360 68 0 46 chr17 42451709 42452035 -47052518 + AluY SINE Alu 1 311 0 181 294 0 0 chr17 42453369 42453420 -47051133 + L2 LINE L2 2992 3042 -230 540 178 9 19 chr17 42453426 42453533 -47051020 - FLAM_A SINE Alu -11 131 26 1776 190 125 3 chr17 42454069 42454422 -47050131 + MSTD LTR MaLR 1 396 0 3001 64 12 111 chr17 42455166 42455669 -47048884 - MLT2A2 LTR ERVL 0 453 1 206 266 43 32 chr17 42456054 42456148 -47048405 + GA-rich Low_complexity Low_complexity 3 97 0 1944 159 0 0 chr17 42456161 42456470 -47048083 - AluY SINE Alu -2 309 1 330 236 49 35 chr17 42457282 42457426 -47047127 + (CCCA)n Simple_repeat Simple_repeat 2 147 0 305 175 125 25 chr17 42457877 42457957 -47046596 - MIR3 SINE MIR -14 194 107 205 319 0 44 chr17 42458776 42458867 -47045686 + CT-rich Low_complexity Low_complexity 6 92 0 468 210 86 43 chr17 42458985 42459147 -47045406 - MIR SINE MIR -70 192 24 708 283 60 4 chr17 42459994 42460227 -47044326 - MIR SINE MIR -1 261 16 559 260 183 24 chr17 42460250 42460458 -47044095 - MIR SINE MIR -2 260 20 377 264 210 26 chr17 42460503 42460675 -47043878 - L1ME3A LINE L1 -6 6156 6017 1791 189 53 55 chr17 42460675 42460882 -47043671 - MSTD LTR MaLR 0 396 190 2257 104 0 0 chr17 42460882 42461180 -47043373 - AluSx SINE Alu -13 299 2 1848 145 3 14 chr17 42461184 42461480 -47043073 - AluJb SINE Alu -5 307 15 1791 189 53 55 chr17 42461480 42461664 -47042889 - MSTD LTR MaLR -209 187 1 377 264 210 26 chr17 42461664 42461718 -47042835 - L1ME3A LINE L1 -145 6017 5892 647 222 266 13 chr17 42461741 42462064 -47042489 - L1ME3A LINE L1 -398 5772 5405 199 344 0 0 chr17 42463030 42463091 -47041462 + MIR SINE MIR 58 118 -90 402 301 83 0 chr17 42463268 42463401 -47041152 - MIR3 SINE MIR -3 205 62 956 235 54 0 chr17 42463939 42464160 -47040393 + MIR SINE MIR 2 234 -28 2211 91 0 3 chr17 42464179 42464477 -47040076 - AluSp SINE Alu -16 297 1 933 181 12 0 chr17 42464495 42464661 -47039892 - AluJo/FRAM SINE Alu -11 301 134 1918 149 3 13 chr17 42464661 42464969 -47039584 - AluJb SINE Alu -7 305 1 421 289 16 16 chr17 42465210 42465331 -47039222 - MIR SINE MIR -63 145 25 482 288 50 7 chr17 42466026 42466165 -47038388 + L2 LINE L2 3125 3269 -3 190 222 214 68 chr17 42466473 42466590 -47037963 - MIR SINE MIR -69 193 60 2144 118 0 0 chr17 42466628 42466934 -47037619 - AluY SINE Alu -5 306 1 492 241 40 101 chr17 42467575 42467638 -47036915 - MER91B DNA MER1_type 0 190 125 2273 102 0 3 chr17 42467638 42467942 -47036611 - AluSx SINE Alu -9 303 1 2508 61 0 0 chr17 42467943 42468254 -47036299 - AluY SINE Alu 0 311 1 1836 156 0 3 chr17 42468254 42468549 -47036004 - AluJo SINE Alu -10 302 9 492 241 40 101 chr17 42468549 42468681 -47035872 - MER91B DNA MER1_type -63 127 4 189 0 0 0 chr17 42469263 42469284 -47035269 + (CGG)n Simple_repeat Simple_repeat 3 23 0 209 180 0 49 chr17 42469297 42469358 -47035195 + C-rich Low_complexity Low_complexity 3 60 0 32 67 0 0 chr17 42469631 42469691 -47034862 + GC_rich Low_complexity Low_complexity 1 60 0 252 59 0 0 chr17 42470820 42470854 -47033699 + (GA)n Simple_repeat Simple_repeat 1 34 0 387 0 0 0 chr17 42470855 42470898 -47033655 + (CA)n Simple_repeat Simple_repeat 2 44 0 * 498 17 0 0 chr17 42470897 42470956 -47033597 + (GA)n Simple_repeat Simple_repeat 2 60 0 436 201 10 88 chr17 42471166 42471360 -47033193 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 1210 164 153 19 chr17 42472033 42472301 -47032252 + AluJo SINE Alu 1 304 -8 2274 116 0 0 chr17 42472304 42472615 -47031938 + AluSx SINE Alu 1 311 -1 274 254 0 0 chr17 42473689 42473748 -47030805 + MIR SINE MIR 116 174 -88 859 141 0 0 chr17 42475310 42475437 -47029116 + FLAM_C SINE Alu 7 136 -176 2417 80 0 3 chr17 42475437 42475749 -47028804 + AluY SINE Alu 1 311 0 1717 146 31 14 chr17 42475983 42476270 -47028283 - AluJb SINE Alu -20 292 1 1728 136 45 7 chr17 42476494 42476781 -47027772 - AluJo SINE Alu 0 312 15 1914 134 0 36 chr17 42477779 42478104 -47026449 - AluJo SINE Alu 0 312 5 305 241 6 86 chr17 42480189 42480313 -47024240 - MIR SINE MIR -57 151 36 876 126 155 5 chr17 42481079 42481286 -47023267 - L1MC2 LINE L1 -5 6339 6102 852 196 36 0 chr17 42481288 42481456 -47023097 - AluJb SINE Alu -5 307 134 2131 80 3 3 chr17 42481456 42481742 -47022811 - AluSq SINE Alu -16 297 12 213 196 0 0 chr17 42482682 42482728 -47021825 + (TG)n Simple_repeat Simple_repeat 1 46 0 181 173 0 135 chr17 42482879 42482931 -47021622 - L2 LINE L2 -1 3271 3227 306 180 65 0 chr17 42485137 42485276 -47019277 + (TG)n Simple_repeat Simple_repeat 1 148 0 410 243 68 40 chr17 42487372 42487549 -47017004 + MIR SINE MIR 33 214 -48 188 195 24 0 chr17 42487574 42487615 -47016938 + MIR SINE MIR 103 144 -64 2234 102 0 0 chr17 42489489 42489793 -47014760 + AluSg SINE Alu 1 304 -6 282 116 0 0 chr17 42490111 42490154 -47014399 + (TG)n Simple_repeat Simple_repeat 1 43 0 209 290 37 65 chr17 42490265 42490372 -47014181 - MIR SINE MIR -73 135 32 683 250 223 12 chr17 42490716 42491044 -47013509 + L2 LINE L2 2917 3313 0 2092 58 83 0 chr17 42491259 42491535 -47013018 + L1PA8 LINE L1 5861 6159 -13 931 165 0 6 chr17 42491545 42491703 -47012850 + AluSg/x SINE Alu 148 304 -8 21 0 0 0 chr17 42492029 42492050 -47012503 + AT_rich Low_complexity Low_complexity 1 21 0 1253 159 83 89 chr17 42492310 42492612 -47011941 - AluJb SINE Alu 0 302 3 654 313 65 13 chr17 42492637 42492867 -47011686 + L3 LINE CR1 1336 1577 0 1823 147 23 7 chr17 42492978 42493284 -47011269 - AluJb SINE Alu -1 311 1 183 42 0 0 chr17 42493406 42493430 -47011123 + (TCTCCC)n Simple_repeat Simple_repeat 1 24 0 2140 121 0 0 chr17 42493436 42493743 -47010810 - AluSx SINE Alu -5 307 1 378 307 136 44 chr17 42494192 42494479 -47010074 + L2 LINE L2 2348 2607 -665 2114 113 10 0 chr17 42494479 42494772 -47009781 - AluSx SINE Alu -16 296 1 378 307 136 44 chr17 42494772 42495145 -47009408 + L2 LINE L2 2607 3078 -194 2360 87 0 0 chr17 42495254 42495565 -47008988 - AluY SINE Alu 0 311 1 2258 80 0 0 chr17 42495565 42495853 -47008700 - AluSg SINE Alu -14 296 9 397 186 0 12 chr17 42495925 42496011 -47008542 + MER53 DNA DNA 12 96 -93 1928 140 7 16 chr17 42496180 42496487 -47008066 - AluSx SINE Alu -8 304 1 320 300 50 33 chr17 42496541 42496661 -47007892 - HAL1 LINE L1 -1234 1273 1152 1975 125 30 0 chr17 42496665 42496968 -47007585 - AluSx SINE Alu 0 312 1 180 152 0 0 chr17 42497464 42497497 -47007056 + (CAT)n Simple_repeat Simple_repeat 3 35 0 638 227 62 6 chr17 42497504 42497680 -47006873 + MIR SINE MIR 34 219 -43 470 229 48 0 chr17 42497675 42497780 -47006773 - L2 LINE L2 -16 3256 3147 * 382 244 163 68 chr17 42497840 42498046 -47006507 - MIR SINE MIR -4 258 33 1981 134 23 0 chr17 42498053 42498352 -47006201 - AluSx SINE Alu -6 306 1 189 0 0 0 chr17 42498381 42498402 -47006151 + (TG)n Simple_repeat Simple_repeat 1 21 0 470 35 0 0 chr17 42498503 42498560 -47005993 - AluJ/FLAM SINE Alu -254 58 2 351 286 71 0 chr17 42498602 42498742 -47005811 - MARNA DNA Mariner -336 250 101 362 296 61 74 chr17 42498974 42499204 -47005349 - L2 LINE L2 -1 3271 3045 2027 136 0 3 chr17 42499267 42499577 -47004976 - AluSx SINE Alu -3 309 1 2214 91 0 0 chr17 42503940 42504237 -47000316 + AluSg SINE Alu 1 297 -13 216 0 0 0 chr17 42504245 42504269 -47000284 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1327 126 0 0 chr17 42504947 42505138 -46999415 - AluSg SINE Alu -119 191 1 1728 143 35 11 chr17 42505139 42505426 -46999127 - AluSx SINE Alu -18 294 1 1825 172 0 0 chr17 42505426 42505727 -46998826 - AluJo SINE Alu -10 302 1 2230 107 0 0 chr17 42507198 42507506 -46997047 + AluSx SINE Alu 1 308 -4 1703 160 20 10 chr17 42507517 42507810 -46996743 + AluJb SINE Alu 1 296 -16 1939 114 16 16 chr17 42507859 42508166 -46996387 - AluSx SINE Alu -5 307 1 2022 101 11 0 chr17 42508172 42508478 -46996075 - AluY SINE Alu 0 309 1 2168 97 0 16 chr17 42508478 42508788 -46995765 - AluSc SINE Alu -3 306 1 303 244 170 7 chr17 42508832 42508967 -46995586 - MIR SINE MIR -8 254 98 235 254 0 0 chr17 42510280 42510339 -46994214 + MIR SINE MIR 81 139 -123 1170 113 6 0 chr17 42510349 42510517 -46994036 + AluSg/x SINE Alu 135 303 -9 1978 132 0 26 chr17 42510521 42510832 -46993721 + AluJb SINE Alu 5 307 -5 199 294 91 70 chr17 42511295 42511438 -46993115 + L2 LINE L2 2914 3059 -213 964 327 82 16 chr17 42511854 42512353 -46992200 + L2 LINE L2 2435 2966 -348 442 242 78 43 chr17 42512726 42512781 -46991772 + L1M4 LINE L1 3730 3782 -2364 750 211 0 0 chr17 42512781 42512909 -46991644 + FLAM_A SINE Alu 2 129 -4 442 242 78 43 chr17 42512909 42513064 -46991489 + L1M4 LINE L1 3782 3950 -2196 2302 85 0 3 chr17 42514763 42515068 -46989485 - AluSx SINE Alu -8 304 1 474 251 127 6 chr17 42515531 42515695 -46988858 + MIR SINE MIR 61 249 -13 300 247 0 39 chr17 42515783 42515860 -46988693 - MIR SINE MIR -65 197 124 2326 106 0 0 chr17 42515864 42516175 -46988378 + AluSx SINE Alu 1 311 -1 2428 160 56 0 chr17 42516175 42516637 -46987916 + L1MB7 LINE L1 5433 5920 -264 21 0 0 0 chr17 42519160 42519181 -46985372 + GC_rich Low_complexity Low_complexity 1 21 0 318 263 0 0 chr17 42520313 42520387 -46984166 + MIR SINE MIR 79 146 -62 241 306 121 25 chr17 42520953 42521084 -46983469 - MIR3 SINE MIR -50 158 16 498 280 57 6 chr17 42522590 42522747 -46981806 - MIR SINE MIR -50 212 48 692 164 0 49 chr17 42522747 42522869 -46981684 + FLAM_C SINE Alu 2 117 -26 342 261 43 11 chr17 42522871 42522963 -46981590 + L1MCa LINE L1 1970 2064 -4362 * 369 326 0 0 chr17 42522905 42522994 -46981559 - L1MC4 LINE L1 -1340 6702 6614 200 279 23 23 chr17 42523873 42523959 -46980594 + C-rich Low_complexity Low_complexity 3 88 0 390 237 54 0 chr17 42524513 42524606 -46979947 + MER91C DNA MER1_type 9 106 -34 435 256 160 0 chr17 42525227 42525352 -46979201 + MIR3 SINE MIR 43 187 -21 268 311 62 26 chr17 42527343 42527475 -46977078 - MIR SINE MIR -67 141 3 244 318 0 45 chr17 42531733 42531821 -46972732 - L2 LINE L2 -1 3312 3229 2119 77 18 3 chr17 42531898 42532184 -46972369 + AluY SINE Alu 1 290 -21 489 54 81 0 chr17 42532184 42532295 -46972258 + (TA)n Simple_repeat Simple_repeat 1 120 0 1534 175 3 42 chr17 42532347 42532656 -46971897 - AluJo SINE Alu -15 297 1 1977 148 0 3 chr17 42532772 42533070 -46971483 - AluSx SINE Alu -14 298 2 2048 96 31 0 chr17 42533071 42533362 -46971191 - AluSx SINE Alu -12 300 1 1969 138 3 3 chr17 42535440 42535752 -46968801 + AluSx SINE Alu 1 312 0 982 154 26 0 chr17 42537594 42537750 -46966803 - AluJb SINE Alu -21 291 132 2153 114 3 3 chr17 42537832 42538139 -46966414 + AluSq SINE Alu 1 307 -6 860 142 0 8 chr17 42538346 42538480 -46966073 - AluJb SINE Alu -179 133 1 1100 51 76 0 chr17 42538542 42538699 -46965854 + L1PA12 LINE L1 5868 6036 -132 257 163 0 0 chr17 42538699 42538742 -46965811 + AluJ/FLAM SINE Alu 60 102 -200 2215 131 0 0 chr17 42540065 42540377 -46964176 - AluSx SINE Alu 0 312 1 2322 64 3 7 chr17 42540391 42540686 -46963867 - AluY SINE Alu -17 294 1 2104 104 3 17 chr17 42540686 42540985 -46963568 - AluSx SINE Alu -17 295 1 1726 161 43 0 chr17 42541005 42541285 -46963268 + AluJb SINE Alu 1 292 -20 2266 70 0 13 chr17 42541287 42541572 -46962981 + AluY SINE Alu 1 283 -28 253 0 0 0 chr17 42541572 42541600 -46962953 + (CAAAA)n Simple_repeat Simple_repeat 2 180 0 2266 70 0 13 chr17 42541600 42541614 -46962939 + AluY SINE Alu 283 296 -15 1026 173 103 0 chr17 42542469 42542683 -46961870 + Tigger7 DNA MER2_type 32 267 -2220 633 124 0 0 chr17 42542681 42542778 -46961775 + Tigger7 DNA MER2_type 2391 2487 0 * 930 131 57 6 chr17 42542835 42543010 -46961543 - MER20 DNA MER1_type 0 219 36 602 100 0 0 chr17 42543309 42543389 -46961164 + AluS SINE Alu 1 80 -232 657 246 163 9 chr17 42543596 42543811 -46960742 - MIR SINE MIR 0 262 15 2334 53 0 20 chr17 42543844 42543981 -46960572 + AluSq SINE Alu 1 139 -174 2248 36 72 0 chr17 42543981 42544258 -46960295 + AluY SINE Alu 1 297 -14 2334 53 0 20 chr17 42544258 42544423 -46960130 + AluSq SINE Alu 139 297 -16 200 233 0 83 chr17 42545472 42545532 -46959021 - MIR SINE MIR -114 94 40 836 261 51 17 chr17 42546048 42546282 -46958271 - MIR SINE MIR -16 246 5 1996 128 14 0 chr17 42546423 42546719 -46957834 - AluSg SINE Alu -10 300 1 486 256 119 0 chr17 42546936 42547126 -46957427 - MIR SINE MIR -24 238 22 4486 129 44 8 chr17 42549101 42549827 -46954726 - L1MB7 LINE L1 0 6184 5433 1863 104 32 75 chr17 42549828 42550001 -46954552 - AluSx SINE Alu -17 295 139 2099 100 0 42 chr17 42550001 42550310 -46954243 - AluSx SINE Alu -16 296 1 1863 104 32 75 chr17 42550310 42550444 -46954109 - AluSx SINE Alu -173 139 1 208 188 0 21 chr17 42550502 42550550 -46954003 + (TA)n Simple_repeat Simple_repeat 2 48 0 200 188 12 62 chr17 42561336 42561416 -46943137 + (TCTG)n Simple_repeat Simple_repeat 4 79 0 205 176 0 0 chr17 42562354 42562388 -46942165 + (TG)n Simple_repeat Simple_repeat 1 34 0 241 180 0 33 chr17 42563126 42563187 -46941366 + C-rich Low_complexity Low_complexity 2 60 0 180 0 0 0 chr17 42563298 42563318 -46941235 + (TCTCCC)n Simple_repeat Simple_repeat 6 25 0 203 256 0 37 chr17 42563380 42563462 -46941091 + C-rich Low_complexity Low_complexity 3 81 0 211 278 0 0 chr17 42564890 42564944 -46939609 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 819 150 0 36 chr17 42564964 42565104 -46939449 + AluJo SINE Alu 1 135 -177 1910 76 4 27 chr17 42565614 42565876 -46938677 - AluSq SINE Alu -6 307 52 210 191 0 24 chr17 42566020 42566062 -46938491 - L2 LINE L2 -3 3269 3229 1197 174 40 0 chr17 42566160 42566361 -46938192 - MER3 DNA MER1_type 0 209 1 440 324 160 0 chr17 42566874 42567087 -46937466 + MIR SINE MIR 16 262 0 262 300 54 31 chr17 42567779 42567909 -46936644 + MIR SINE MIR 52 184 -78 192 310 43 52 chr17 42567890 42568006 -46936547 - MIR SINE MIR -146 116 2 * 25 75 0 0 chr17 42568965 42569018 -46935535 + AT_rich Low_complexity Low_complexity 1 53 0 189 195 0 0 chr17 42569543 42569584 -46934969 + (CA)n Simple_repeat Simple_repeat 1 41 0 2341 96 0 6 chr17 42570312 42570777 -46933776 + AluSx SINE Alu 1 463 0 336 248 91 0 chr17 42570969 42571090 -46933463 - MER20B DNA MER1_type -44 739 608 207 0 0 0 chr17 42571322 42571345 -46933208 + (A)n Simple_repeat Simple_repeat 1 23 0 2192 102 23 3 chr17 42571348 42571651 -46932902 + AluSx SINE Alu 1 309 -3 284 113 25 9 chr17 42571747 42571950 -46932603 + AluSq SINE Alu 12 302 0 998 108 0 0 chr17 42572372 42572501 -46932052 + AluSg SINE Alu 2 130 -180 2309 103 0 3 chr17 42572504 42572816 -46931737 + AluY SINE Alu 1 311 0 214 179 26 0 chr17 42572816 42572855 -46931698 + GA-rich Low_complexity Low_complexity 4 43 0 312 311 30 30 chr17 42572857 42572989 -46931564 + L1 LINE L1 3073 3204 -2942 336 248 91 0 chr17 42573159 42573280 -46931273 - MER20B DNA MER1_type -44 739 608 2297 79 3 19 chr17 42573477 42573793 -46930760 - AluY SINE Alu 0 311 1 517 232 169 24 chr17 42573795 42573888 -46930665 - MER20B DNA MER1_type -491 292 214 1797 159 0 22 chr17 42573888 42574202 -46930351 + AluJb SINE Alu 1 307 -5 517 232 169 24 chr17 42574202 42574362 -46930191 - MER20B DNA MER1_type -569 214 2 919 209 51 33 chr17 42574407 42574622 -46929931 - MER20B DNA MER1_type 0 219 1 184 326 0 34 chr17 42574739 42574828 -46929725 - L2 LINE L2 -165 3107 3022 988 206 5 5 chr17 42574938 42575161 -46929392 + Charlie5 DNA MER1_type 2363 2585 -27 252 259 0 0 chr17 42575163 42575221 -46929332 + L2 LINE L2 3256 3313 0 182 333 87 14 chr17 42575210 42575348 -46929205 - L2 LINE L2 -1002 2312 2165 * 221 154 0 0 chr17 42575370 42575409 -46929144 - L2 LINE L2 -6 3307 3269 180 238 36 83 chr17 42575585 42575669 -46928884 - L2 LINE L2 -335 2978 2899 24 53 0 0 chr17 42577440 42577478 -46927075 + GC_rich Low_complexity Low_complexity 1 38 0 195 100 0 0 chr17 42577488 42577518 -46927035 + (CGG)n Simple_repeat Simple_repeat 1 30 0 24 53 0 0 chr17 42577830 42577868 -46926685 + GC_rich Low_complexity Low_complexity 1 38 0 200 358 0 0 chr17 42578554 42578621 -46925932 - MIR3 SINE MIR -28 180 114 329 325 73 0 chr17 42579485 42579608 -46924945 + MIR3 SINE MIR 54 185 -23 585 184 10 0 chr17 42579611 42579709 -46924844 - FLAM_A SINE Alu -18 124 26 207 0 0 0 chr17 42579773 42579796 -46924757 + (A)n Simple_repeat Simple_repeat 1 23 0 2269 105 0 6 chr17 42579912 42580225 -46924328 - AluSx SINE Alu -1 311 1 2209 85 3 0 chr17 42580232 42580547 -46924006 - AluSp SINE Alu 0 316 1 407 292 118 45 chr17 42580820 42580998 -46923555 - MIR SINE MIR -54 208 18 2445 50 3 3 chr17 42581925 42582224 -46922329 + AluY SINE Alu 1 299 -12 24 0 0 0 chr17 42583060 42583084 -46921469 + AT_rich Low_complexity Low_complexity 1 24 0 2020 99 46 3 chr17 42583088 42583370 -46921183 + AluSx SINE Alu 1 294 -18 1328 205 29 103 chr17 42583866 42584026 -46920527 + MLT1B LTR MaLR 1 171 -219 631 133 125 25 chr17 42584026 42584146 -46920407 - FLAM_C SINE Alu 0 133 2 1328 205 29 103 chr17 42584146 42584404 -46920149 + MLT1B LTR MaLR 171 388 -2 2633 167 38 13 chr17 42584689 42585163 -46919390 - MER66B LTR ERV1 0 486 1 371 222 71 40 chr17 42585480 42585606 -46918947 + MIR SINE MIR 46 175 -87 226 326 22 0 chr17 42585646 42585735 -46918818 + L2 LINE L2 2969 3059 -213 1430 140 9 0 chr17 42586151 42586379 -46918174 - AluSg/x SINE Alu -7 303 74 217 253 22 38 chr17 42586547 42586669 -46917884 + GA-rich Low_complexity Low_complexity 1 120 0 188 342 25 51 chr17 42587097 42587176 -46917377 - L3b LINE CR1 -87 1496 1420 2078 138 0 10 chr17 42587356 42587668 -46916885 - AluJo SINE Alu -3 309 1 197 33 33 0 chr17 42588518 42588548 -46916005 + (TGGGGG)n Simple_repeat Simple_repeat 4 34 0 540 0 0 0 chr17 42588661 42588721 -46915832 + (TG)n Simple_repeat Simple_repeat 2 61 0 2060 117 13 0 chr17 42588874 42589173 -46915380 + AluSx SINE Alu 1 303 -9 186 250 36 18 chr17 42589567 42589623 -46914930 - MER5A DNA MER1_type 0 189 133 196 291 12 70 chr17 42589641 42589727 -46914826 - MIR3 SINE MIR -43 165 85 211 225 0 0 chr17 42590274 42590314 -46914239 + L2 LINE L2 3180 3219 -94 198 0 0 0 chr17 42591431 42591453 -46913100 + (TTCC)n Simple_repeat Simple_repeat 3 24 0 2442 70 3 0 chr17 42591453 42591738 -46912815 - AluSx SINE Alu -26 286 1 199 315 24 55 chr17 42591791 42591918 -46912635 - MIR3 SINE MIR -85 123 1 225 94 0 0 chr17 42592895 42592927 -46911626 + (CGTG)n Simple_repeat Simple_repeat 4 35 0 2316 103 0 28 chr17 42593637 42593957 -46910596 - AluSx SINE Alu -1 311 1 300 247 0 39 chr17 42593961 42594038 -46910515 + MIR SINE MIR 124 197 -65 465 251 127 6 chr17 42594126 42594290 -46910263 - MIR SINE MIR -13 249 61 2132 104 38 3 chr17 42594753 42594877 -46909676 + AluSx SINE Alu 1 119 -193 339 44 0 0 chr17 42594877 42594922 -46909631 + (CA)n Simple_repeat Simple_repeat 2 46 0 2132 104 38 3 chr17 42594922 42595086 -46909467 + AluSx SINE Alu 119 299 -13 1597 163 29 0 chr17 42595245 42595491 -46909062 - AluJb SINE Alu -16 296 44 1854 149 30 10 chr17 42595496 42595791 -46908762 - AluJb SINE Alu -10 302 2 267 299 201 0 chr17 42596180 42596314 -46908239 + L2 LINE L2 3100 3260 -12 189 264 0 0 chr17 42596668 42596721 -46907832 - MIR SINE MIR -106 102 50 338 274 184 72 chr17 42598919 42599251 -46905302 + L2 LINE L2 2897 3265 -7 336 160 75 43 chr17 42601303 42601397 -46903156 - MIR3 SINE MIR -6 202 106 494 324 36 14 chr17 42601479 42601698 -46902855 + MIR SINE MIR 27 250 -12 2244 83 45 0 chr17 42601817 42602105 -46902448 + AluSq SINE Alu 1 301 -12 371 258 197 38 chr17 42602136 42602268 -46902285 + MER5B DNA MER1_type 1 153 -25 533 274 43 6 chr17 42603009 42603173 -46901380 + MIR SINE MIR 20 189 -73 273 239 120 43 chr17 42603432 42603524 -46901029 - MIR SINE MIR -56 206 108 635 241 15 34 chr17 42603577 42603764 -46900789 - MIR SINE MIR -14 248 64 394 240 32 24 chr17 42604488 42604613 -46899940 + MIR SINE MIR 20 145 -117 1423 153 5 0 chr17 42604667 42604876 -46899677 - AluSg/x SINE Alu -19 291 82 1384 110 46 156 chr17 42604917 42605046 -46899507 + AluJo SINE Alu 1 143 -159 1573 103 0 45 chr17 42605046 42605270 -46899283 + AluSq SINE Alu 1 214 -99 1384 110 46 156 chr17 42605270 42605466 -46899087 + AluJo SINE Alu 143 290 -12 264 286 71 39 chr17 42605729 42605883 -46898670 + L3 LINE CR1 1316 1474 -103 450 304 19 6 chr17 42606474 42606635 -46897918 - MIR SINE MIR 0 262 100 325 259 70 42 chr17 42606686 42606741 -46897812 + MIR SINE MIR 100 152 -110 2364 106 7 0 chr17 42606741 42607043 -46897510 + AluSx SINE Alu 1 304 -8 325 259 70 42 chr17 42607043 42607130 -46897423 + MIR SINE MIR 152 246 -16 1907 189 13 53 chr17 42607317 42607771 -46896782 - MER63B DNA MER1_type 0 436 1 273 268 27 27 chr17 42607954 42608066 -46896487 - MIR SINE MIR -7 255 144 806 177 255 5 chr17 42608903 42609095 -46895458 + MIR SINE MIR 18 257 -5 190 263 0 0 chr17 42609106 42609144 -46895409 - L2 LINE L2 -9 3304 3267 681 248 83 26 chr17 42609159 42609389 -46895164 - MIR SINE MIR 0 262 20 2138 134 3 6 chr17 42609613 42609926 -46894627 + AluSx SINE Alu 1 312 0 360 283 33 7 chr17 42610008 42610160 -46894393 - L2 LINE L2 -455 2859 2704 223 311 168 42 chr17 42610505 42610672 -46893881 + MIR SINE MIR 20 207 -55 500 212 82 130 chr17 42610733 42610851 -46893702 - MIR SINE MIR 0 262 140 1871 145 31 3 chr17 42610851 42611140 -46893413 - AluJb SINE Alu -15 297 1 500 212 82 130 chr17 42611140 42611290 -46893263 - MIR SINE MIR -122 140 7 1982 178 68 32 chr17 42611307 42611750 -46892803 + LTR2B LTR ERV1 32 490 0 224 244 0 73 chr17 42612227 42612309 -46892244 + MIR SINE MIR 82 157 -105 366 273 174 12 chr17 42612316 42612477 -46892076 - MIR SINE MIR -68 194 8 243 283 117 25 chr17 42613197 42613317 -46891236 + MIR SINE MIR 18 148 -60 2274 91 0 3 chr17 42613469 42613756 -46890797 + AluSx SINE Alu 14 299 -13 1628 213 65 25 chr17 42615479 42615606 -46888947 - L1M4 LINE L1 -2228 3918 3798 705 211 0 0 chr17 42615606 42615734 -46888819 - FLAM_A SINE Alu -4 129 2 1628 213 65 25 chr17 42615734 42616052 -46888501 - L1M4 LINE L1 -2348 3798 3455 2524 70 3 0 chr17 42616239 42616541 -46888012 + AluY SINE Alu 1 303 -8 272 324 70 28 chr17 42616584 42616611 -46887942 - L2 LINE L2 0 3272 3248 2166 100 0 28 chr17 42616611 42616934 -46887619 + AluSx SINE Alu 1 315 0 272 324 70 28 chr17 42616934 42617045 -46887508 - L2 LINE L2 -24 3248 3125 934 190 12 71 chr17 42617120 42617255 -46887298 + MER33 DNA MER1_type 26 141 -2444 797 156 0 0 chr17 42617255 42617383 -46887170 - FLAM_C SINE Alu -2 131 4 934 190 12 71 chr17 42617383 42617500 -46887053 + MER33 DNA MER1_type 141 263 -61 724 265 131 8 chr17 42617503 42617763 -46886790 - MLT1C LTR MaLR -2 465 174 1816 179 0 7 chr17 42617770 42618072 -46886481 - AluJo SINE Alu -12 300 1 2006 126 13 23 chr17 42618215 42618517 -46886036 - AluSx SINE Alu -13 299 1 246 273 50 0 chr17 42618611 42618710 -46885843 + LTR67 LTR ERVL 432 535 -22 1765 145 25 18 chr17 42619442 42619759 -46884794 + AluJb SINE Alu 1 319 0 279 171 64 107 chr17 42619921 42620007 -46884546 - Charlie7 DNA MER1_type -10 2602 2523 2241 130 0 10 chr17 42620007 42620306 -46884247 + AluSx SINE Alu 1 296 -16 279 171 64 107 chr17 42620306 42620359 -46884194 - Charlie7 DNA MER1_type -89 2523 2469 * 2312 216 55 46 chr17 42620357 42621226 -46883327 - Charlie7 DNA MER1_type -65 2547 1671 565 253 132 105 chr17 42621261 42621566 -46882987 - Charlie7 DNA MER1_type -2174 438 120 2677 55 0 0 chr17 42621566 42621873 -46882680 - AluY SINE Alu 0 311 5 565 253 132 105 chr17 42621873 42621939 -46882614 - Charlie7 DNA MER1_type -2492 120 57 453 161 0 0 chr17 42622878 42622959 -46881594 + MLT1E3 LTR MaLR 544 624 0 * 1044 186 20 67 chr17 42622959 42623209 -46881344 - MER115 DNA AcHobo -57 636 399 327 326 47 8 chr17 42623312 42623441 -46881112 - MER115 DNA AcHobo -466 227 94 565 27 0 0 chr17 42624917 42624991 -46879562 + AluY SINE Alu 231 304 -8 2281 112 0 0 chr17 42625307 42625610 -46878943 + AluSx SINE Alu 2 304 -8 207 0 0 0 chr17 42627231 42627254 -46877299 + (A)n Simple_repeat Simple_repeat 1 23 0 1871 128 83 0 chr17 42628024 42628313 -46876240 + AluSp SINE Alu 1 313 0 1991 164 6 6 chr17 42628356 42628667 -46875886 - AluJo SINE Alu -1 311 1 252 0 0 0 chr17 42629361 42629389 -46875164 + (TG)n Simple_repeat Simple_repeat 2 29 0 223 286 43 14 chr17 42629808 42629878 -46874675 + L3 LINE CR1 1420 1491 -86 193 240 0 20 chr17 42629885 42629935 -46874618 - L2 LINE L2 0 3313 3265 337 0 23 0 chr17 42629966 42630010 -46874543 + AluY SINE Alu 2 46 -255 1464 282 63 20 chr17 42630165 42631015 -46873538 - HAL1 LINE L1 -823 1684 776 387 379 30 50 chr17 42631184 42631625 -46872928 - HAL1 LINE L1 -2075 432 1 397 288 0 18 chr17 42631999 42632110 -46872443 + MIR SINE MIR 154 262 0 223 350 32 24 chr17 42632170 42632293 -46872260 + L2 LINE L2 2968 3091 -181 208 304 0 0 chr17 42632401 42632457 -46872096 + L2 LINE L2 3242 3297 -16 2277 119 0 6 chr17 42632546 42632857 -46871696 + AluSx SINE Alu 1 309 -3 527 144 10 0 chr17 42632864 42632961 -46871592 + GA-rich Low_complexity Low_complexity 4 101 0 2244 83 45 0 chr17 42633858 42634146 -46870407 + AluSq SINE Alu 1 301 -12 267 299 201 0 chr17 42634441 42634575 -46869978 - L2 LINE L2 -12 3260 3100 1809 155 30 10 chr17 42634964 42635260 -46869293 + AluJb SINE Alu 2 303 -9 1118 174 119 21 chr17 42635264 42635500 -46869053 + AluJo SINE Alu 44 302 -10 2467 102 0 0 chr17 42635503 42635806 -46868747 + AluSx SINE Alu 1 303 -9 264 122 0 0 chr17 42636126 42636167 -46868386 + (TG)n Simple_repeat Simple_repeat 1 41 0 204 290 37 65 chr17 42636278 42636385 -46868168 - MIR SINE MIR -73 135 32 582 232 85 14 chr17 42636729 42636940 -46867613 + L2 LINE L2 2917 3142 -171 226 270 32 0 chr17 42637820 42637883 -46866670 - MER91 DNA MER1_type 0 190 126 2398 103 0 3 chr17 42637883 42638185 -46866368 - AluSx SINE Alu -11 301 1 2651 58 0 0 chr17 42638188 42638497 -46866056 - AluY SINE Alu -2 309 1 1782 188 0 7 chr17 42638497 42638801 -46865752 - AluJo SINE Alu -10 302 1 2000 125 13 26 chr17 42638944 42639247 -46865306 - AluSx SINE Alu -13 299 1 246 273 50 0 chr17 42639341 42639440 -46865113 + LTR67 LTR ERVL 432 535 -22 384 301 83 0 chr17 42640275 42640408 -46864145 - MIR3 SINE MIR -3 205 62 866 228 59 0 chr17 42640946 42641148 -46863405 + MIR SINE MIR 2 215 -47 1799 142 0 3 chr17 42641186 42641482 -46863071 - AluSp SINE Alu -16 297 3 522 235 15 0 chr17 42641502 42641634 -46862919 - FRAM SINE Alu -11 165 32 191 685 0 0 chr17 42641775 42641864 -46862689 + G-rich Low_complexity Low_complexity 1 89 0 302 223 85 43 chr17 42643014 42643108 -46861445 - L2 LINE L2 -43 3229 3132 205 319 0 44 chr17 42643616 42643707 -46860846 + CT-rich Low_complexity Low_complexity 6 92 0 455 210 86 43 chr17 42643825 42643987 -46860566 - MIR SINE MIR -70 192 24 309 181 97 0 chr17 42645249 42645321 -46859232 + LTR50 LTR ERVL 717 795 0 1032 241 38 19 chr17 42645472 42645734 -46858819 - MLT1E LTR MaLR 0 593 327 307 245 32 11 chr17 42645991 42646085 -46858468 + MLT1E3 LTR MaLR 384 479 -114 570 209 0 0 chr17 42646778 42646917 -46857636 + (CA)n Simple_repeat Simple_repeat 1 139 0 349 161 0 0 chr17 42647219 42647281 -46857272 - AluSp SINE Alu -106 197 136 1988 125 13 33 chr17 42647424 42647729 -46856824 - AluSx SINE Alu -13 299 1 246 273 50 0 chr17 42647823 42647922 -46856631 + LTR67 LTR ERVL 432 535 -22 1765 145 25 18 chr17 42648654 42648968 -46855585 + AluJb SINE Alu 1 316 0 2323 185 44 118 chr17 42649130 42649216 -46855337 - Charlie7 DNA MER1_type -10 2602 2511 2241 130 0 10 chr17 42649216 42649515 -46855038 + AluSx SINE Alu 1 296 -16 2323 185 44 118 chr17 42649515 42650435 -46854118 - Charlie7 DNA MER1_type -101 2511 1671 578 290 158 37 chr17 42650470 42650767 -46853786 - Charlie7 DNA MER1_type -2174 438 106 2724 48 0 0 chr17 42650775 42651085 -46853468 - AluY SINE Alu -1 310 1 674 88 20 0 chr17 42651086 42651188 -46853365 + (TTCC)n Simple_repeat Simple_repeat 2 105 0 2097 119 7 7 chr17 42651196 42651498 -46853055 - AluSx SINE Alu -10 302 1 805 112 32 8 chr17 42651527 42651652 -46852901 - FLAM_C SINE Alu -1 132 5 453 161 0 0 chr17 42652657 42652738 -46851815 + MLT1E3 LTR MaLR 544 624 0 * 1044 186 20 67 chr17 42652738 42652988 -46851565 - MER115 DNA AcHobo -57 636 399 327 326 47 8 chr17 42653091 42653220 -46851333 - MER115 DNA AcHobo -466 227 94 1855 178 57 0 chr17 42653285 42653655 -46850898 - L1MB5 LINE L1 -8 6166 5776 2532 47 0 10 chr17 42654820 42655116 -46849437 - AluY SINE Alu -18 293 1 256 336 82 15 chr17 42655116 42655241 -46849312 - MIR SINE MIR -42 220 84 318 240 125 0 chr17 42655400 42655496 -46849057 - MIR3 SINE MIR -8 200 93 366 181 85 43 chr17 42656091 42656185 -46848368 - L2 LINE L2 -43 3229 3132 1102 151 0 0 chr17 42656379 42656538 -46848015 + FRAM SINE Alu 4 162 -14 201 388 122 0 chr17 42656666 42656813 -46847740 - L2 LINE L2 -557 2757 2593 330 312 28 57 chr17 42656835 42657117 -46847436 - L2 LINE L2 -823 2491 2218 1009 269 106 29 chr17 42657174 42657617 -46846936 + LTR16C LTR ERVL 15 491 0 2468 72 0 13 chr17 42658206 42658510 -46846043 - AluSq SINE Alu -13 300 1 611 228 156 11 chr17 42658540 42658720 -46845833 + MER112 DNA MER1_type 4 209 -51 444 234 18 18 chr17 42658766 42658877 -46845676 + L2 LINE L2 3197 3307 -6 309 305 93 50 chr17 42659465 42659797 -46844756 - L2 LINE L2 -212 3060 2703 646 144 8 24 chr17 42659812 42659826 -46844727 - AluJo/FRAM SINE Alu 0 312 299 2221 108 3 3 chr17 42659826 42660132 -46844421 - AluY SINE Alu -5 306 1 646 144 8 24 chr17 42660132 42660242 -46844311 - AluJo/FRAM SINE Alu -13 299 190 226 122 20 41 chr17 42660370 42660419 -46844134 + (CAGTA)n Simple_repeat Simple_repeat 2 49 0 2469 93 0 0 chr17 42662219 42662531 -46842022 + AluSx SINE Alu 1 312 0 486 272 68 14 chr17 42664004 42664151 -46840402 + MIR SINE MIR 49 203 -59 450 0 0 0 chr17 42664260 42664310 -46840243 + (TG)n Simple_repeat Simple_repeat 1 50 0 537 103 0 35 chr17 42664615 42664702 -46839851 - AluJ/FRAM SINE Alu -11 301 218 832 156 0 0 chr17 42664704 42664832 -46839721 - AluJo/FLAM SINE Alu -174 128 1 189 338 26 13 chr17 42664960 42665037 -46839516 + L2 LINE L2 3099 3176 -96 406 115 0 0 chr17 42665260 42665321 -46839232 - AluS SINE Alu -256 62 2 208 304 0 0 chr17 42665410 42665466 -46839087 - L2 LINE L2 -16 3297 3242 230 333 41 32 chr17 42665574 42665697 -46838856 - L2 LINE L2 -181 3091 2968 454 270 0 18 chr17 42665757 42665868 -46838685 - MIR SINE MIR 0 262 154 387 379 30 50 chr17 42666242 42666683 -46837870 + HAL1 LINE L1 1 432 -2075 1555 272 60 38 chr17 42666852 42667790 -46836763 + HAL1 LINE L1 776 1755 -752 233 301 88 9 chr17 42667859 42667972 -46836581 - L1M4 LINE L1 -2472 3674 3553 758 277 99 52 chr17 42668072 42668537 -46836016 + MLT1J LTR MaLR 25 511 0 24 0 0 0 chr17 42669298 42669322 -46835231 + AT_rich Low_complexity Low_complexity 1 24 0 466 264 117 25 chr17 42669335 42669498 -46835055 + MIR3 SINE MIR 23 200 -8 322 301 82 20 chr17 42669491 42669637 -46834916 - L2 LINE L2 -1 3312 3158 * 260 323 0 0 chr17 42670026 42670091 -46834462 + L2 LINE L2 3149 3213 -59 1596 191 19 117 chr17 42670300 42670354 -46834199 + MLT1C LTR MaLR 1 59 -408 1963 130 60 3 chr17 42670354 42670638 -46833915 + AluSx SINE Alu 1 300 -12 1596 191 19 117 chr17 42670638 42670789 -46833764 + MLT1C LTR MaLR 59 223 -244 2651 67 20 0 chr17 42670789 42671147 -46833406 + L1PA8 LINE L1 5805 6169 -3 1596 191 19 117 chr17 42671147 42671454 -46833099 + MLT1C LTR MaLR 223 464 -3 2115 145 0 3 chr17 42671554 42671851 -46832702 - AluSx SINE Alu -16 296 1 2066 143 0 7 chr17 42671856 42672149 -46832404 - AluJb SINE Alu -21 291 1 487 182 10 0 chr17 42672268 42672367 -46832186 - MER53 DNA DNA -89 100 1 365 304 45 34 chr17 42672943 42673242 -46831311 - L2 LINE L2 -194 3078 2780 1752 253 70 23 chr17 42673604 42674122 -46830431 + MLT1E LTR MaLR 52 593 0 309 181 97 0 chr17 42674273 42674345 -46830208 - LTR50 LTR ERVL 0 795 717 431 320 73 13 chr17 42674704 42674938 -46829615 - L1ME LINE L1 -323 5798 5551 702 279 44 31 chr17 42675123 42675349 -46829204 + MIR SINE MIR 8 236 -26 423 0 0 0 chr17 42675614 42675661 -46828892 + (TG)n Simple_repeat Simple_repeat 2 48 0 450 277 45 116 chr17 42675998 42676290 -46828263 - L2 LINE L2 -3 3269 2999 219 300 73 36 chr17 42676377 42676487 -46828066 + MIR3 SINE MIR 90 203 -5 462 128 0 0 chr17 42676609 42676703 -46827850 + (CA)n Simple_repeat Simple_repeat 2 95 0 235 326 111 23 chr17 42676837 42677009 -46827544 + MIR SINE MIR 64 250 -12 2170 116 0 10 chr17 42677043 42677337 -46827216 + AluSx SINE Alu 7 297 -15 713 268 3 23 chr17 42677469 42677669 -46826884 + MIR SINE MIR 55 249 -13 393 287 23 16 chr17 42677680 42677809 -46826744 - MLT1J1 LTR MaLR 0 446 317 1136 119 50 0 chr17 42677841 42678000 -46826553 - AluSg/x SINE Alu -14 296 130 678 274 75 5 chr17 42678001 42678202 -46826351 - MLT1J1 LTR MaLR -168 278 64 273 362 85 42 chr17 42679238 42679435 -46825118 - L2 LINE L2 -20 3252 3036 2331 88 7 0 chr17 42679435 42679729 -46824824 + AluSq SINE Alu 1 296 -17 273 362 85 42 chr17 42679729 42679838 -46824715 - L2 LINE L2 -236 3036 2933 1999 117 45 7 chr17 42679849 42680139 -46824414 + AluSq SINE Alu 1 301 -12 257 275 133 17 chr17 42680188 42680308 -46824245 + MIR SINE MIR 36 169 -93 736 251 68 5 chr17 42680995 42681202 -46823351 + MIR SINE MIR 36 255 -7 1155 54 0 0 chr17 42681202 42681349 -46823204 + (TTCC)n Simple_repeat Simple_repeat 2 148 0 354 206 241 7 chr17 42682515 42682656 -46821897 - MER5A DNA MER1_type -7 182 9 570 209 0 0 chr17 42683310 42683449 -46821104 + (TG)n Simple_repeat Simple_repeat 1 139 0 316 254 64 9 chr17 42684126 42684236 -46820317 - MLT1E LTR MaLR -94 499 384 247 204 56 0 chr17 42685178 42685232 -46819321 - L2 LINE L2 -3 3310 3254 332 329 62 16 chr17 42685553 42685746 -46818807 - MIR SINE MIR -41 221 20 2352 106 0 0 chr17 42686042 42686344 -46818209 + AluSg SINE Alu 1 302 -8 2322 66 7 7 chr17 42686548 42686837 -46817716 + AluY SINE Alu 19 307 -4 1043 93 79 0 chr17 42686838 42687014 -46817539 + AluSg/x SINE Alu 133 319 0 2481 75 10 3 chr17 42687072 42687380 -46817173 + AluY SINE Alu 1 310 -1 279 283 82 10 chr17 42687705 42687810 -46816743 - MIR SINE MIR -63 145 61 225 315 18 18 chr17 42687949 42688060 -46816493 + CT-rich Low_complexity Low_complexity 2 112 0 220 229 33 0 chr17 42688322 42688383 -46816170 + (TG)n Simple_repeat Simple_repeat 2 64 0 4953 63 0 5 chr17 42688415 42689068 -46815485 - L1PA8 LINE L1 0 6172 5523 739 205 16 54 chr17 42689117 42689302 -46815251 - MER45A DNA AcHobo 0 178 1 277 195 34 34 chr17 42689323 42689441 -46815112 + (TG)n Simple_repeat Simple_repeat 1 118 0 438 259 7 30 chr17 42689826 42689961 -46814592 - MIR3 SINE MIR -12 196 65 249 143 0 0 chr17 42690200 42690242 -46814311 + L2 LINE L2 3258 3299 -14 618 261 140 0 chr17 42690265 42690487 -46814066 + MIR SINE MIR 1 253 -9 251 229 33 0 chr17 42690484 42690545 -46814008 + MIR SINE MIR 74 136 -126 * 202 262 0 0 chr17 42690576 42690618 -46813935 + L2 LINE L2 3215 3256 -16 414 100 0 0 chr17 42692318 42692378 -46812175 + (TG)n Simple_repeat Simple_repeat 1 60 0 434 327 40 15 chr17 42692842 42693041 -46811512 + MIR3 SINE MIR 1 204 -4 881 205 100 0 chr17 42693158 42693348 -46811205 - MIR SINE MIR -46 216 8 473 284 38 1 chr17 42693382 42693536 -46811017 - MIR SINE MIR -57 151 1 507 195 0 35 chr17 42693588 42693701 -46810852 + MIR3 SINE MIR 90 198 -10 1398 181 7 122 chr17 42694853 42695263 -46809290 + MLT1A1 LTR MaLR 3 365 0 1332 158 0 5 chr17 42697971 42698193 -46806360 - AluJb SINE Alu -7 305 85 761 185 32 13 chr17 42698199 42698356 -46806197 + MER5A DNA MER1_type 2 161 -28 280 253 175 39 chr17 42698368 42698522 -46806031 - MER5A DNA MER1_type 0 189 15 310 267 55 14 chr17 42698535 42698681 -46805872 + MIR SINE MIR 30 182 -62 183 222 93 19 chr17 42698727 42698781 -46805772 + L2 LINE L2 3141 3198 -74 229 218 0 64 chr17 42699122 42699200 -46805353 + CT-rich Low_complexity Low_complexity 1 73 0 250 203 47 0 chr17 42701806 42701870 -46802683 + (TGAA)n Simple_repeat Simple_repeat 4 70 0 737 256 122 5 chr17 42704019 42704254 -46800299 - MIR SINE MIR -4 258 8 378 278 56 16 chr17 42704273 42704399 -46800154 - MIR SINE MIR -80 182 52 271 344 38 44 chr17 42704607 42704790 -46799763 + L2 LINE L2 2682 2863 -451 588 134 62 45 chr17 42705891 42706003 -46798550 - MER63 DNA MER1_type -272 790 677 271 309 0 0 chr17 42707790 42707858 -46796695 - L2 LINE L2 0 3313 3246 450 251 30 54 chr17 42707881 42708048 -46796505 + LTR33A LTR ERVL 23 185 -338 222 171 0 0 chr17 42708048 42708089 -46796464 + C-rich Low_complexity Low_complexity 3 43 0 4786 169 35 31 chr17 42708101 42708826 -46795727 - L1MB7 LINE L1 -7 6177 5456 2304 106 0 0 chr17 42708826 42709137 -46795416 - AluSx SINE Alu -1 311 1 4786 169 35 31 chr17 42709137 42710231 -46794322 - L1MB7 LINE L1 -728 5456 4354 * 21379 178 49 19 chr17 42710229 42716531 -46788022 + L1PA12 LINE L1 11 7306 -300 1007 204 29 44 chr17 42716525 42716800 -46787753 - L1MB7 LINE L1 -2226 3920 3650 * 2872 192 66 71 chr17 42716796 42717628 -46786925 - L1MB7 LINE L1 -2895 3251 2423 1699 167 0 30 chr17 42717628 42717928 -46786625 - AluJo SINE Alu -21 291 1 2872 192 66 71 chr17 42717928 42718020 -46786533 - L1MB7 LINE L1 -3723 2423 2332 1202 221 92 0 chr17 42718171 42718442 -46786111 + LTR33A LTR ERVL 228 523 0 307 314 73 0 chr17 42718675 42718799 -46785754 + MIR3 SINE MIR 61 193 -15 1729 172 0 3 chr17 42719135 42719432 -46785121 + AluJo SINE Alu 11 306 -6 380 239 70 35 chr17 42719442 42719584 -46784969 + MIR3 SINE MIR 38 178 -30 5451 43 5 0 chr17 42720519 42721174 -46783379 + L1PA5 LINE L1 5497 6154 0 481 250 83 0 chr17 42721672 42721780 -46782773 - L2 LINE L2 0 3272 3156 1048 189 60 84 chr17 42721794 42722143 -46782410 - MLT1B LTR MaLR 0 390 3 1981 136 0 10 chr17 42722584 42722894 -46781659 + AluJb SINE Alu 1 307 -5 335 311 74 8 chr17 42723213 42723335 -46781218 - L2 LINE L2 0 3272 3143 210 327 131 9 chr17 42723354 42723461 -46781092 - MIR SINE MIR -47 215 96 29 28 0 0 chr17 42725132 42725168 -46779385 + AT_rich Low_complexity Low_complexity 1 36 0 15445 182 31 17 chr17 42725168 42727820 -46776733 - L1PB1 LINE L1 -8 6859 4245 2072 92 41 3 chr17 42727820 42728113 -46776440 - AluY SINE Alu -7 304 1 15445 182 31 17 chr17 42728113 42731426 -46773127 - L1PB1 LINE L1 -2622 4245 663 687 238 54 5 chr17 42731434 42731619 -46772934 - L1PB1 LINE L1 -6664 199 6 202 279 262 8 chr17 42731725 42731847 -46772706 + MIR3 SINE MIR 51 203 -5 430 281 31 68 chr17 42732022 42732306 -46772247 + L2 LINE L2 2781 3053 -219 185 293 0 35 chr17 42732433 42732491 -46772062 + L2 LINE L2 3216 3271 -1 1285 174 0 9 chr17 42732562 42732780 -46771773 + MER57A-int LTR ERV1 253 468 -7069 577 253 129 16 chr17 42732949 42733135 -46771418 - MIR SINE MIR -6 256 50 2353 152 25 8 chr17 42733209 42733588 -46770965 + MER57A LTR ERV1 1 389 -14 2235 100 3 0 chr17 42733588 42733898 -46770655 - AluSq SINE Alu -2 311 1 2353 152 25 8 chr17 42733898 42733914 -46770639 + MER57A LTR ERV1 389 403 0 2263 92 0 13 chr17 42733938 42734241 -46770312 + AluSq SINE Alu 1 299 -14 6794 136 27 48 chr17 42734244 42735447 -46769106 + MER57A-int LTR ERV1 4543 5717 -1820 1944 122 10 0 chr17 42735447 42735741 -46768812 + AluSx SINE Alu 1 297 -15 6794 136 27 48 chr17 42735741 42735844 -46768709 + MER57A-int LTR ERV1 5717 5821 -1716 7519 192 26 15 chr17 42735970 42736542 -46768011 + MER57A-int LTR ERV1 2419 2983 -4554 2673 104 35 24 chr17 42736542 42736965 -46767588 + MSTA LTR MaLR 1 428 0 7519 192 26 15 chr17 42736965 42737904 -46766649 + MER57A-int LTR ERV1 2983 7146 -391 645 138 58 51 chr17 42737904 42738042 -46766511 + LTR54B LTR ERV1 3 141 -357 1379 160 13 9 chr17 42738042 42738273 -46766280 + MER57A-int LTR ERV1 7306 7537 0 2166 160 69 0 chr17 42738273 42738648 -46765905 + MER57A LTR ERV1 1 401 -2 578 272 17 28 chr17 42738898 42739078 -46765475 - LTR67 LTR ERVL -377 180 3 728 214 31 45 chr17 42739203 42739427 -46765126 - L1ME1 LINE L1 -5 6161 5941 781 291 22 0 chr17 42739803 42740026 -46764527 + MER115 DNA AcHobo 143 370 -323 798 214 57 10 chr17 42740060 42740252 -46764301 + MER115 DNA AcHobo 491 691 -2 349 321 136 23 chr17 42740366 42740587 -46763966 - MIR SINE MIR -11 251 6 372 373 26 1 chr17 42740880 42741058 -46763495 + MIR SINE MIR 11 191 -67 205 197 13 105 chr17 42741861 42741937 -46762616 - MIR SINE MIR -87 121 53 225 0 0 0 chr17 42742095 42742120 -46762433 + (CA)n Simple_repeat Simple_repeat 2 26 0 1336 160 0 0 chr17 42742137 42742343 -46762210 - AluJb SINE Alu -23 289 84 320 342 19 7 chr17 42742462 42742617 -46761936 + L3b LINE CR1 1254 1410 -173 310 311 118 0 chr17 42742870 42742989 -46761564 + L2 LINE L2 3172 3304 -9 798 268 117 35 chr17 42743078 42743639 -46760914 + L1ME4a LINE L1 5508 6118 -3 553 274 42 6 chr17 42743764 42743932 -46760621 + MER5B DNA MER1_type 1 174 -4 470 126 147 11 chr17 42743944 42744039 -46760514 - MER3 DNA MER1_type -1 208 101 1266 126 0 0 chr17 42744039 42744213 -46760340 - AluSg/x SINE Alu 0 312 139 363 159 16 32 chr17 42744218 42744281 -46760272 - MER3 DNA MER1_type -99 110 49 1725 181 0 10 chr17 42744313 42744605 -46759948 + AluJb SINE Alu 1 289 -23 508 218 49 14 chr17 42745584 42745725 -46758828 + MIR3 SINE MIR 16 161 -47 448 194 234 24 chr17 42745725 42745849 -46758704 - MER5B DNA MER1_type -1 177 28 1984 103 100 0 chr17 42745849 42746130 -46758423 + AluSx SINE Alu 1 309 -3 328 179 123 0 chr17 42746196 42746281 -46758272 - MER5A DNA MER1_type -88 101 4 414 332 4 23 chr17 42746649 42746845 -46757708 - MIR SINE MIR -41 221 30 221 321 71 0 chr17 42747444 42747528 -46757025 + L2 LINE L2 3184 3273 -40 1752 173 0 0 chr17 42748198 42748475 -46756078 - AluJb SINE Alu -13 299 23 3576 117 66 2 chr17 42748476 42748988 -46755565 - MER41C LTR ERV1 -9 545 1 297 299 11 0 chr17 42749528 42749615 -46754938 - MIR SINE MIR -68 140 53 352 236 118 8 chr17 42750061 42750188 -46754365 + MIR SINE MIR 1 141 -121 255 267 0 0 chr17 42750526 42750612 -46753941 + (CA)n Simple_repeat Simple_repeat 2 87 0 1637 136 18 160 chr17 42750960 42751185 -46753368 - MLT1B LTR MaLR -4 386 255 2280 106 0 3 chr17 42751185 42751486 -46753067 - AluSx SINE Alu -12 300 1 1637 136 18 160 chr17 42751486 42751710 -46752843 - MLT1B LTR MaLR -135 255 1 1883 154 0 32 chr17 42751760 42752071 -46752482 + AluJo SINE Alu 1 301 -11 279 274 38 19 chr17 42752222 42752328 -46752225 - L1ME LINE L1 -252 5869 5762 1703 135 4 30 chr17 42752983 42753250 -46751303 - AluJb SINE Alu -52 260 1 1819 150 0 14 chr17 42753589 42753875 -46750678 + AluJo SINE Alu 1 282 -30 26 50 0 0 chr17 42754590 42754630 -46749923 + AT_rich Low_complexity Low_complexity 1 40 0 571 187 32 8 chr17 42755739 42755862 -46748691 + L2 LINE L2 3184 3309 -4 306 0 0 0 chr17 42756023 42756057 -46748496 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 1830 160 7 7 chr17 42756141 42756429 -46748124 + AluJo SINE Alu 1 288 -24 25 31 0 0 chr17 42756429 42756461 -46748092 + AT_rich Low_complexity Low_complexity 1 32 0 218 147 0 0 chr17 42757252 42757286 -46747267 + L3 LINE CR1 1523 1556 -21 189 0 0 0 chr17 42760379 42760400 -46744153 + (T)n Simple_repeat Simple_repeat 1 21 0 1957 113 32 3 chr17 42760402 42760685 -46743868 + AluSx SINE Alu 2 292 -20 292 292 42 0 chr17 42761432 42761528 -46743025 + L2 LINE L2 3172 3271 -1 2307 96 0 0 chr17 42761731 42762024 -46742529 - AluSg SINE Alu -17 293 1 379 204 159 0 chr17 42762039 42762127 -46742426 - MER81 DNA DNA 0 114 13 903 242 59 35 chr17 42762579 42763004 -46741549 - MER39 LTR ERV1 0 647 67 2035 136 10 0 chr17 42763557 42763858 -46740695 + AluSx SINE Alu 1 304 -8 523 268 8 8 chr17 42764144 42764271 -46740282 + MIR SINE MIR 25 151 -111 338 264 28 57 chr17 42764421 42764527 -46740026 + MIR3 SINE MIR 58 160 -48 214 248 184 28 chr17 42764553 42764662 -46739891 - MER5A DNA MER1_type -61 128 3 233 200 17 17 chr17 42765392 42765452 -46739101 + MIR SINE MIR 203 262 0 688 120 0 0 chr17 42765704 42765796 -46738757 - FLAM_C SINE Alu -25 118 27 789 191 49 20 chr17 42765856 42766060 -46738493 - MER113 DNA MER1_type? -310 211 2 365 330 100 25 chr17 42766453 42766692 -46737861 + L3 LINE CR1 1220 1476 -101 244 169 231 0 chr17 42767186 42767251 -46737302 - MER116 DNA Mariner 0 80 1 2131 100 14 0 chr17 42768017 42768308 -46736245 + AluSg SINE Alu 1 295 -15 2125 89 11 11 chr17 42768660 42768942 -46735611 + AluSx SINE Alu 1 282 -30 473 205 12 0 chr17 42771129 42771212 -46733341 + MER3 DNA MER1_type 43 126 -83 * 975 172 166 36 chr17 42771198 42771529 -46733024 + MER3 DNA MER1_type 2248 2621 0 1084 220 29 0 chr17 42772340 42772549 -46732004 - MER58A DNA MER1_type -3 221 7 1977 142 0 0 chr17 42775093 42775374 -46729179 - AluSq SINE Alu -26 287 7 459 200 9 9 chr17 42775406 42775516 -46729037 + MER113 DNA MER1_type? 2 111 -410 1887 168 0 10 chr17 42776199 42776502 -46728051 - AluJo SINE Alu -11 301 2 204 254 74 66 chr17 42778229 42778351 -46726202 - MIR SINE MIR -59 203 81 493 275 121 0 chr17 42778660 42778842 -46725711 - L1MC5 LINE L1 -36 7925 7722 183 80 0 0 chr17 42779100 42779125 -46725428 + (A)n Simple_repeat Simple_repeat 1 25 0 394 249 139 6 chr17 42779223 42779396 -46725157 - L1ME4a LINE L1 -185 5936 5741 224 325 7 46 chr17 42780422 42780573 -46723980 + GA-rich Low_complexity Low_complexity 1 145 0 306 167 0 0 chr17 42785853 42785913 -46718640 + (TGG)n Simple_repeat Simple_repeat 2 61 0 203 184 0 0 chr17 42787758 42787796 -46716757 + A-rich Low_complexity Low_complexity 1 38 0 188 321 9 55 chr17 42788304 42788413 -46716140 + L2 LINE L2 2981 3084 -188 240 303 115 16 chr17 42788980 42789102 -46715451 + L2 LINE L2 3176 3309 -4 458 278 59 18 chr17 42789127 42789296 -46715257 - MIR SINE MIR -65 197 22 260 328 49 69 chr17 42790486 42790834 -46713719 + L2 LINE L2 2922 3262 -10 2282 50 0 18 chr17 42791279 42791562 -46712991 + AluY SINE Alu 17 294 -17 186 43 0 0 chr17 42791563 42791586 -46712967 + (TA)n Simple_repeat Simple_repeat 2 24 0 399 269 210 35 chr17 42791908 42792075 -46712478 + L2 LINE L2 3012 3148 -165 2343 91 13 0 chr17 42792075 42792382 -46712171 - AluSq SINE Alu -2 311 1 399 269 210 35 chr17 42792382 42792471 -46712082 + L2 LINE L2 3148 3313 0 1281 158 47 0 chr17 42792531 42792746 -46711807 + AluJb SINE Alu 84 308 -4 824 235 15 5 chr17 42793970 42794166 -46710387 + MER58A DNA MER1_type 24 221 -3 1843 148 3 36 chr17 42794477 42794781 -46709772 - AluJo SINE Alu -18 294 1 427 135 0 0 chr17 42794891 42794965 -46709588 - MLT1F LTR MaLR -1 541 468 1640 193 10 10 chr17 42794976 42795272 -46709281 - AluJo SINE Alu -15 297 2 265 342 54 36 chr17 42795593 42795704 -46708849 - MIR3 SINE MIR -45 163 51 259 283 94 58 chr17 42795793 42795931 -46708622 + MIR SINE MIR 120 262 0 968 135 0 0 chr17 42796217 42796358 -46708195 - FLAM_C SINE Alu -2 141 1 295 89 36 0 chr17 42796935 42796991 -46707562 + (TA)n Simple_repeat Simple_repeat 2 59 0 216 24 73 0 chr17 42796992 42797033 -46707520 + GA-rich Low_complexity Low_complexity 1 44 0 2164 110 0 17 chr17 42798835 42799136 -46705417 + AluSc SINE Alu 1 296 -13 303 248 72 16 chr17 42799718 42799843 -46704710 + L1ME2 LINE L1 5754 5885 -279 212 139 0 23 chr17 42800326 42800369 -46704184 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 1258 120 0 0 chr17 42800372 42800556 -46703997 - MIR SINE MIR -11 251 68 2116 101 0 60 chr17 42801066 42801383 -46703170 - AluSx SINE Alu -14 298 1 1371 189 22 0 chr17 42801405 42801632 -46702921 - AluJo SINE Alu -80 232 1 2105 109 3 3 chr17 42802193 42802487 -46702066 - AluSg SINE Alu -16 294 1 28 0 0 0 chr17 42802585 42802613 -46701940 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr17 42802760 42802783 -46701770 + (A)n Simple_repeat Simple_repeat 1 23 0 180 0 0 0 chr17 42802854 42802874 -46701679 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1694 137 49 4 chr17 42802878 42803141 -46701412 - AluSx SINE Alu -37 275 1 2047 144 7 3 chr17 42803164 42803469 -46701084 - AluSx SINE Alu -1 311 6 189 209 0 23 chr17 42804158 42804201 -46700352 + MIR3 SINE MIR 156 197 -11 46 68 0 0 chr17 42804784 42804872 -46699681 + AT_rich Low_complexity Low_complexity 1 88 0 654 249 47 80 chr17 42805121 42805481 -46699072 + MLT1H1 LTR MaLR 4 352 -203 21 0 0 0 chr17 42805987 42806008 -46698545 + AT_rich Low_complexity Low_complexity 1 21 0 2541 87 0 0 chr17 42807351 42807662 -46696891 + AluSx SINE Alu 2 312 0 300 244 24 12 chr17 42807918 42808000 -46696553 - MIR SINE MIR -70 138 56 245 313 0 12 chr17 42808694 42808774 -46695779 + MER5A DNA MER1_type 96 174 -15 994 173 72 47 chr17 42808779 42809056 -46695497 - MER33 DNA MER1_type 0 324 41 1816 124 7 28 chr17 42809056 42809346 -46695207 + AluJo SINE Alu 1 284 -28 23 0 0 0 chr17 42809357 42809380 -46695173 + AT_rich Low_complexity Low_complexity 1 23 0 855 220 13 0 chr17 42809768 42809927 -46694626 - MER5B DNA MER1_type -16 162 2 3288 138 21 24 chr17 42810332 42810540 -46694013 - MER67C LTR ERV1 -1 709 502 2083 111 35 0 chr17 42810540 42810829 -46693724 - AluSx SINE Alu -13 299 1 3288 138 21 24 chr17 42810829 42811237 -46693316 - MER67C LTR ERV1 -208 502 95 4266 187 15 23 chr17 42811255 42812145 -46692408 + L1MA9 LINE L1 4723 5618 -694 2430 96 0 0 chr17 42812145 42812457 -46692096 + AluSx SINE Alu 1 312 0 4266 187 15 23 chr17 42812457 42812627 -46691926 + L1MA9 LINE L1 5618 5788 -524 273 29 0 0 chr17 42812627 42812661 -46691892 + (TG)n Simple_repeat Simple_repeat 2 35 0 4266 187 15 23 chr17 42812661 42813163 -46691390 + L1MA9 LINE L1 5788 6274 -38 313 180 11 67 chr17 42813187 42813276 -46691277 - MER67C LTR ERV1 -612 98 15 295 275 138 0 chr17 42813673 42813782 -46690771 + L2 LINE L2 3188 3311 -2 2290 98 3 16 chr17 42815547 42815862 -46688691 - AluSx SINE Alu -1 311 1 21 36 0 0 chr17 42815898 42815926 -46688627 + AT_rich Low_complexity Low_complexity 1 28 0 810 204 23 0 chr17 42816170 42816346 -46688207 - L1MD1 LINE L1 -20 6222 6043 3351 171 30 6 chr17 42816542 42817203 -46687350 + MER67C LTR ERV1 3 679 -31 1310 103 0 0 chr17 42817203 42817378 -46687175 - AluSg/x SINE Alu -4 306 132 240 35 0 0 chr17 42817378 42817407 -46687146 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1620 41 25 0 chr17 42817407 42817603 -46686950 - AluY SINE Alu -28 283 83 183 314 0 0 chr17 42817627 42817678 -46686875 - L2 LINE L2 -220 3052 3002 1010 200 9 0 chr17 42817803 42818013 -46686540 - L1MB5 LINE L1 -6 6168 5957 1190 188 12 4 chr17 42818015 42818260 -46686293 + L1MB5 LINE L1 5701 5947 -227 25 0 0 0 chr17 42819281 42819306 -46685247 + AT_rich Low_complexity Low_complexity 1 25 0 1383 172 118 39 chr17 42820046 42820325 -46684228 + AluJo SINE Alu 1 301 -11 1060 115 6 6 chr17 42821130 42821295 -46683258 - L1PA16 LINE L1 0 6166 6002 30 0 0 0 chr17 42821827 42821857 -46682696 + AT_rich Low_complexity Low_complexity 1 30 0 2175 142 0 0 chr17 42821874 42822183 -46682370 - AluSx SINE Alu -3 309 1 721 162 0 0 chr17 42822668 42822779 -46681774 - FLAM_C SINE Alu -32 111 1 276 280 65 19 chr17 42822779 42822886 -46681667 - L1ME LINE L1 -640 5522 5411 254 321 198 0 chr17 42823819 42823900 -46680653 + L2 LINE L2 3127 3223 -49 328 253 11 0 chr17 42823920 42824015 -46680538 + L1ME3A LINE L1 5822 5917 -253 449 179 205 17 chr17 42824016 42824133 -46680420 + MIR SINE MIR 50 188 -74 476 250 86 40 chr17 42824156 42824308 -46680245 + MIR SINE MIR 28 186 -76 594 0 0 0 chr17 42824553 42824619 -46679934 + (TTTC)n Simple_repeat Simple_repeat 1 66 0 2282 93 0 0 chr17 42824620 42824899 -46679654 - AluSx SINE Alu -33 279 1 953 129 0 0 chr17 42825033 42825165 -46679388 + AluSg/x SINE Alu 155 286 -26 297 51 0 0 chr17 42825165 42825204 -46679349 + (CATA)n Simple_repeat Simple_repeat 2 40 0 238 91 0 0 chr17 42825208 42825241 -46679312 + MER112 DNA MER1_type 222 254 -6 2153 97 3 10 chr17 42826111 42826400 -46678153 + AluSx SINE Alu 11 297 -15 761 191 113 39 chr17 42827058 42827262 -46677291 + MER20 DNA MER1_type 1 219 0 418 259 65 94 chr17 42827408 42827578 -46676975 - MIR3 SINE MIR -7 201 37 2041 143 3 0 chr17 42827784 42828091 -46676462 - AluSx SINE Alu -4 308 1 2256 104 0 3 chr17 42828601 42828908 -46675645 - AluSp SINE Alu -7 306 1 21 36 0 0 chr17 42829672 42829700 -46674853 + AT_rich Low_complexity Low_complexity 1 28 0 2468 99 0 0 chr17 42830177 42830490 -46674063 - AluSq SINE Alu 0 313 1 33 73 0 0 chr17 42831492 42831560 -46672993 + AT_rich Low_complexity Low_complexity 1 68 0 3728 40 0 2 chr17 42831560 42832013 -46672540 - L1PA4 LINE L1 -5 6150 5699 25 0 0 0 chr17 42832423 42832448 -46672105 + AT_rich Low_complexity Low_complexity 1 25 0 2040 123 34 0 chr17 42832701 42832993 -46671560 - AluSx SINE Alu -10 302 1 743 301 193 35 chr17 42833727 42834162 -46670391 + L3 LINE CR1 1073 1576 -1 21 0 0 0 chr17 42834365 42834386 -46670167 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr17 42834607 42834636 -46669917 + AT_rich Low_complexity Low_complexity 1 29 0 808 127 0 0 chr17 42834743 42834861 -46669692 + AluJ SINE Alu 1 118 -184 391 237 86 29 chr17 42835378 42835517 -46669036 + MIR SINE MIR 105 251 -11 2150 118 0 3 chr17 42835682 42835971 -46668582 - AluJb SINE Alu -13 299 12 1232 116 0 0 chr17 42835987 42836151 -46668402 + AluJ SINE Alu 105 268 -44 2313 57 40 7 chr17 42836855 42837152 -46667401 + AluSg SINE Alu 1 307 -3 1802 145 42 7 chr17 42837241 42837530 -46667023 + AluJb SINE Alu 1 299 -13 2257 152 132 35 chr17 42839280 42839794 -46664759 + LTR6A LTR ERV1 1 564 0 1371 134 0 71 chr17 42840696 42840785 -46663768 - AluJo SINE Alu -90 222 128 2202 133 0 0 chr17 42840785 42841085 -46663468 - AluJb SINE Alu -12 300 1 1371 134 0 71 chr17 42841085 42841234 -46663319 - AluJo SINE Alu -184 128 1 2235 99 0 29 chr17 42842497 42842809 -46661744 - AluSg SINE Alu -7 303 1 975 187 0 0 chr17 42842811 42842977 -46661576 - FRAM SINE Alu -17 159 1 207 88 0 0 chr17 42843632 42843666 -46660887 + (TA)n Simple_repeat Simple_repeat 1 34 0 2140 110 0 29 chr17 42843906 42844216 -46660337 - AluSx SINE Alu -11 301 1 336 244 135 52 chr17 42845343 42845536 -46659017 + L1M2 LINE L1 401 609 -6240 1597 137 11 46 chr17 42846627 42846791 -46657762 + L1MB2 LINE L1 5896 6047 -124 2215 94 7 3 chr17 42846791 42847090 -46657463 + AluSx SINE Alu 1 300 -12 1597 137 11 46 chr17 42847090 42847209 -46657344 + L1MB2 LINE L1 6047 6169 -2 1050 106 0 0 chr17 42847818 42847960 -46656593 + AluSg/x SINE Alu 160 301 -9 4100 121 35 23 chr17 42848468 42848985 -46655568 - L1MA3 LINE L1 -1 6304 5776 2270 95 10 0 chr17 42848985 42849279 -46655274 - AluSq SINE Alu -16 297 1 4100 121 35 23 chr17 42849279 42849414 -46655139 - L1MA3 LINE L1 -529 5776 5644 207 298 19 29 chr17 42850662 42850766 -46653787 + MIR3 SINE MIR 92 194 -14 2342 90 10 0 chr17 42850838 42851148 -46653405 - AluSp SINE Alu 0 313 1 997 236 51 5 chr17 42851448 42851664 -46652889 + MER21B LTR ERV1 79 304 -559 2994 100 24 0 chr17 42851673 42852137 -46652416 + MER1A DNA MER1_type 1 528 -1 1627 234 44 48 chr17 42852137 42852428 -46652125 + MER21B LTR ERV1 307 597 -266 2906 96 43 21 chr17 42852428 42852847 -46651706 - MSTA LTR MaLR 0 428 1 1627 234 44 48 chr17 42852847 42852990 -46651563 + MER21B LTR ERV1 597 739 -124 1082 156 0 22 chr17 42853058 42853237 -46651316 + FRAM SINE Alu 2 176 0 424 274 95 25 chr17 42853244 42853612 -46650941 + L1M4 LINE L1 2957 3350 -2796 1961 131 0 3 chr17 42854581 42854910 -46649643 + AluY SINE Alu 1 328 0 993 263 88 85 chr17 42854961 42855144 -46649409 - L1ME4a LINE L1 -5 6116 5935 2485 141 50 29 chr17 42855144 42855563 -46648990 + MSTA LTR MaLR 1 428 0 993 263 88 85 chr17 42855563 42856170 -46648383 - L1ME4a LINE L1 -186 5935 5317 772 260 64 30 chr17 42857091 42